BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015590
(404 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224056581|ref|XP_002298921.1| predicted protein [Populus trichocarpa]
gi|222846179|gb|EEE83726.1| predicted protein [Populus trichocarpa]
Length = 326
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/326 (73%), Positives = 281/326 (86%), Gaps = 1/326 (0%)
Query: 49 KLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD 108
KL HKDWLSP EV+KIF NL+DP S+ISV NQYSKRKDY PNEALYT +INKLAQAK FD
Sbjct: 1 KLTHKDWLSPNEVIKIFENLKDPNSIISVWNQYSKRKDYKPNEALYTQVINKLAQAKNFD 60
Query: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP-SYNCWPSVKTFN 167
AIEDIMQ+IK++K CR S+ FF+NVIKIYG +AGRI KA+ETLFDMP YNCWP+VK+FN
Sbjct: 61 AIEDIMQKIKLDKSCRLSNDFFHNVIKIYGQLAGRIKKAMETLFDMPKGYNCWPNVKSFN 120
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
LVLNLLVSAK++ + +Y A LG+EID C LNIL+KGLCENG+LEAAF VLDEFPKQ
Sbjct: 121 LVLNLLVSAKVFDVVHEVYLQAPMLGIEIDVCSLNILIKGLCENGDLEAAFNVLDEFPKQ 180
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
CEPNVRT+STLMHGLC+KG V+EAFGLLERME EGIDADT+TFNILISGLRKQGKV EG
Sbjct: 181 RCEPNVRTFSTLMHGLCKKGKVDEAFGLLERMEKEGIDADTITFNILISGLRKQGKVVEG 240
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
++LLERM KGC PN+ SYQE+LYGLLD +++ E KE + RMI + + PSFVSYKKL+HG
Sbjct: 241 LELLERMNIKGCEPNAGSYQEILYGLLDAEKYVEGKEFMVRMIGQGVDPSFVSYKKLVHG 300
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRM 373
LC ++L+ D+DWVLK+M +QGFVP+M
Sbjct: 301 LCKERLLRDLDWVLKQMARQGFVPKM 326
>gi|255561325|ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539064|gb|EEF40660.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 341
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/321 (72%), Positives = 276/321 (85%), Gaps = 1/321 (0%)
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK 121
++IF +++DP SV SV +QY+ RKDY PNEALYTL+INKLAQAK FDAIEDIMQRIK+EK
Sbjct: 1 MRIFESIKDPNSVFSVWDQYTNRKDYKPNEALYTLVINKLAQAKNFDAIEDIMQRIKLEK 60
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP-SYNCWPSVKTFNLVLNLLVSAKLYG 180
CR S+GFFYNVIKIYG++AGRI AI+TLFDMP YNCWP VKTFNLVLNLLVSA+++
Sbjct: 61 SCRLSNGFFYNVIKIYGHLAGRIKVAIDTLFDMPRGYNCWPDVKTFNLVLNLLVSARIFD 120
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ IY A LGVEIDACCLNIL+KGLCENG+LEAAFYVLDEFPKQ C+PNVRT+STLM
Sbjct: 121 VVHEIYEKAPILGVEIDACCLNILIKGLCENGDLEAAFYVLDEFPKQRCKPNVRTFSTLM 180
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
H LC KG V +AFGLL+RME+EGI+ DT+TFNILISGLRK+G++EEGM+LL +MK KGC
Sbjct: 181 HYLCAKGEVNQAFGLLDRMENEGIEVDTITFNILISGLRKRGRIEEGMELLVKMKLKGCE 240
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
PN+ SYQEVLYGLLD +F EAK+ + RM+CE PSFVSYKKLI GLC +KL+ +VD V
Sbjct: 241 PNAGSYQEVLYGLLDAGKFSEAKDFMDRMVCEGNGPSFVSYKKLIDGLCKEKLIGEVDCV 300
Query: 361 LKKMVQQGFVPRMGMWREIVG 381
LK+M++QGFVP+MGMW+ IVG
Sbjct: 301 LKQMLKQGFVPKMGMWKHIVG 321
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 21/289 (7%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
V+KI+ +L I V ++ + + YN P+ + L++N L A+ FD + +I ++
Sbjct: 72 VIKIYGHLAGRIKV-AIDTLFDMPRGYNCWPDVKTFNLVLNLLVSARIFDVVHEIYEKAP 130
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+ L D N++ G + A L + P C P+V+TF+ +++ L +
Sbjct: 131 I--LGVEIDACCLNILIKGLCENGDLEAAFYVLDEFPKQRCKPNVRTFSTLMHYLCAKGE 188
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ G+ G+E+D NIL+ GL + G +E +L + + CEPN +Y
Sbjct: 189 VNQAFGLLDRMENEGIEVDTITFNILISGLRKRGRIEEGMELLVKMKLKGCEPNAGSYQE 248
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
+++GL + G EA ++RM EG V++ LI GL K+ + E +L++M +G
Sbjct: 249 VLYGLLDAGKFSEAKDFMDRMVCEGNGPSFVSYKKLIDGLCKEKLIGEVDCVLKQMLKQG 308
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
P + K +VG M+ E + + + ++I G
Sbjct: 309 FVPKMGMW----------------KHIVGSMLSESGDCTSICFSQVIGG 341
>gi|225462369|ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Vitis vinifera]
Length = 393
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/368 (63%), Positives = 289/368 (78%), Gaps = 7/368 (1%)
Query: 13 QSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPI 72
+S+ +S T+ +K TF P + +L+HKDWLSP EVLKIF LR+P
Sbjct: 14 RSVSRSALIHPTLIQKSTFFSTFPPDDLK-------RLDHKDWLSPREVLKIFDGLRNPE 66
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
SV+ VL+ SKRKD+ PNEALYTL+INKLAQA+ FDAIED+++ +K++K CR SD FFYN
Sbjct: 67 SVMPVLDSVSKRKDFKPNEALYTLVINKLAQARMFDAIEDVIKTLKIDKQCRLSDVFFYN 126
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
VIK+YGN+AG+ +A+ETLFDMP ++CWPSVKTFNLVLN+LVSAK + + +Y A +L
Sbjct: 127 VIKVYGNVAGQPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPEL 186
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GVEIDACCLNIL+KGLC +GN++AA +LDE+PKQ C PNVRT+STLMHGLCE G VE A
Sbjct: 187 GVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGA 246
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
GLLERME EG+ DTV FNILISGLRK+G+VEEGM+LL RMK KGCYPN+ SYQEVLYG
Sbjct: 247 LGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAGSYQEVLYG 306
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+LD RF +AKE + +MI E +SPSFVSYK +I+GLC + LV DV W+LK+MV+QGFVP
Sbjct: 307 VLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMMIYGLCKENLVADVVWILKQMVEQGFVPE 366
Query: 373 MGMWREIV 380
MWR I+
Sbjct: 367 RWMWRRIL 374
>gi|147778708|emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
Length = 393
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/376 (62%), Positives = 291/376 (77%), Gaps = 8/376 (2%)
Query: 5 SHFARNHRQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKI 64
S F R +R S+ +S T+ +K F P + +L+HKDWLSP EVLKI
Sbjct: 7 SIFLRIYR-SVSRSALIHPTLIQKSIFFSTFPPDDLK-------RLDHKDWLSPREVLKI 58
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
F LR+P SV+ VL+ KRKD+ PNEALYTL+INKLAQA+ FDAIED+++ +K++K CR
Sbjct: 59 FDGLRNPESVMPVLDSVCKRKDFKPNEALYTLVINKLAQARMFDAIEDVIKTLKIDKQCR 118
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
SD FFYNVIK+YGN+AGR +A+ETLFDMP ++CWPSVKTFNLVLN+LVSAK + +
Sbjct: 119 LSDVFFYNVIKVYGNVAGRPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHK 178
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+Y A +LGVEIDACCLNIL+KGLC +GN++AA +LDE+PKQ C PNVRT+STLMHGLC
Sbjct: 179 VYAGAPELGVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLC 238
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
E G VE A GLLERME EG+ DTV FNILISGLRK+G+VEEGM+LL RMK KGCYPN+
Sbjct: 239 ESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAG 298
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
SYQEVLYG+LD RF +AKE + +MI E +SPSFVSYK +I+GLC + LV DV W+LK+M
Sbjct: 299 SYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMVIYGLCKENLVADVVWILKQM 358
Query: 365 VQQGFVPRMGMWREIV 380
V+QGFVP MWR I+
Sbjct: 359 VEQGFVPERWMWRRIL 374
>gi|297830004|ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328724|gb|EFH59143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 409
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/379 (60%), Positives = 281/379 (74%), Gaps = 3/379 (0%)
Query: 8 ARNHRQSIIQSLSSASTITRKRTFALA--SPSASHQDSDHHAYKLNHKDWLSPTEVLKIF 65
A N QSLS AST+ + + +PS+ D +L HKDWL+P EVLKIF
Sbjct: 11 ASNSNPGRPQSLS-ASTVRLLSSSSSDRYTPSSQRYSGDDKLARLKHKDWLAPNEVLKIF 69
Query: 66 SNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF 125
N++DP ++ YSKRKDY P E+LY L+INK QAK FD IE++M IK+EK CRF
Sbjct: 70 ENVKDPSFLMPAYQHYSKRKDYQPTESLYALLINKFGQAKMFDEIEEVMSTIKLEKRCRF 129
Query: 126 SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
S+ FFYN+++IYGN+AGRI++AIE LF MP + CWPS K+FN +LNLLVSAKL+ EI I
Sbjct: 130 SEDFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSAKSFNFILNLLVSAKLFDEIHKI 189
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ SA KLGVEIDACCLNIL+KGLCE+GNLEAA +LDEFPKQ PNV T+S L+ G C
Sbjct: 190 FVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCN 249
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
KG EEAF LLERME E I+ DT+TFNILISGLRK+G+VEEG+ LLERMK KGC PN +
Sbjct: 250 KGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKLKGCEPNPGT 309
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
YQEVLYGLLDKKR EAKE++ +MI M PSF+SYKK++ GLC K V ++DWVL+KMV
Sbjct: 310 YQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVAEMDWVLRKMV 369
Query: 366 QQGFVPRMGMWREIVGCVT 384
GFVP+ GMW + V CV
Sbjct: 370 NHGFVPKTGMWWKAVCCVV 388
>gi|449456671|ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
gi|449503658|ref|XP_004162112.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/352 (61%), Positives = 281/352 (79%), Gaps = 2/352 (0%)
Query: 48 YKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
+KL+H+DWLSP EV+ I ++ P SV++ L+Q+S RKDY PN+ +YTL++++LA+ + F
Sbjct: 48 HKLSHRDWLSPNEVINIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLVVSRLAEGRLF 107
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
D IE +M RIK E+ R SD FFY+VIKIYGN+AGR++KAI+TLFDMP+YNCWPSVKTFN
Sbjct: 108 DDIEKVMLRIKAERNFRLSDEFFYHVIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTFN 167
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
VLNLLVSAK++ + +Y A KLG+EIDACCLNIL+KGLC++GNL+AA VLDEFP+Q
Sbjct: 168 FVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAALKVLDEFPQQ 227
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
C PNVRT+STL+HGLCE G + A L +ME+EG+ DT+TFNILISGLRK+ ++EE
Sbjct: 228 RCRPNVRTFSTLLHGLCENGELGRALELFCKMENEGVCPDTITFNILISGLRKKKRIEEA 287
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
++LL RMK KGCYPN+ +YQEVLYGLLD +F EA++ + RMI E M PSFVSYKKL+ G
Sbjct: 288 IELLGRMKLKGCYPNAGTYQEVLYGLLDTGKFIEARDCMHRMISEGMDPSFVSYKKLLSG 347
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETV 399
LC +KL EDVDWVLK+MV QGFVP++GMW+ I+ C+ G N + +T+ V
Sbjct: 348 LCKKKLTEDVDWVLKQMVMQGFVPKVGMWKVILRCMLSG--NEECIDITDEV 397
>gi|15231886|ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g14580, mitochondrial; Flags: Precursor
gi|9294380|dbj|BAB02390.1| unnamed protein product [Arabidopsis thaliana]
gi|119935972|gb|ABM06049.1| At3g14580 [Arabidopsis thaliana]
gi|332642020|gb|AEE75541.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/385 (58%), Positives = 285/385 (74%), Gaps = 3/385 (0%)
Query: 1 MILRSHFARNHRQSIIQSLSSAST-ITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPT 59
++L + N R+S QSLSS+ I + + S+ D +L HKDWL+P
Sbjct: 6 LVLSATSNSNPRRS--QSLSSSGVRILSSSSSDRYTSSSQRYSGDDRLARLRHKDWLAPN 63
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
EVLKIF N++DP ++ YSKRKDY P E+LY L+INK QAK +D IE++M+ IK+
Sbjct: 64 EVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKL 123
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
EK CRFS+ FFYN+++IYGN+AGRI++AIE LF MP + CWPS K+FN +LNLLVSAKL+
Sbjct: 124 EKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLF 183
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
EI I+ SA KLGVEIDACCLNIL+KGLCE+GNLEAA +LDEFP+Q PNV T+S L
Sbjct: 184 DEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPL 243
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ G C KG EEAF LLERME E I+ DT+TFNILISGLRK+G+VEEG+ LLERMK KGC
Sbjct: 244 IRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGC 303
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
PN +YQEVLYGLLDKKR EAKE++ +MI M PSF+SYKK++ GLC K V ++DW
Sbjct: 304 EPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDW 363
Query: 360 VLKKMVQQGFVPRMGMWREIVGCVT 384
VL++MV GFVP+ MW ++V CV
Sbjct: 364 VLRQMVNHGFVPKTLMWWKVVQCVV 388
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 76/176 (43%), Gaps = 3/176 (1%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ + +L+++ ++K PN ++ +I +F+ +++R++ E++ D +N
Sbjct: 220 AALQLLDEFPQQKS-RPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERI--EPDTITFN 276
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
++ GR+ + I+ L M C P+ T+ VL L+ K E + + +
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW 336
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+ ++ GLCE ++ +VL + P + ++ + K N
Sbjct: 337 GMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNN 392
>gi|357168491|ref|XP_003581673.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Brachypodium distachyon]
Length = 392
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/392 (48%), Positives = 253/392 (64%), Gaps = 11/392 (2%)
Query: 22 ASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQY 81
A + R+ ++ D + +L+HKDWL+P EVLKIF+N+RD + SV +
Sbjct: 2 ARALARRTVPPFLRLRSTVGDDSYWMGRLDHKDWLAPNEVLKIFANIRDASLITSVFRKA 61
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
R+DY P+EALY+L+I++LA A+RF +E+++ R +VEK RFSD FFY +IK+YGN+A
Sbjct: 62 CARRDYKPSEALYSLMIDRLACARRFGDVEELLVRARVEKF-RFSDEFFYRLIKMYGNVA 120
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+A+E L+ MP YNCWPS KTFN VL++LV + Y I +Y SA LGV +D CC
Sbjct: 121 NHPERAMEMLYAMPGYNCWPSTKTFNYVLHMLVCKRQYEVIHEVYESAPWLGVTLDTCCF 180
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+KGLC+ G + A +L E PKQ C PNV TYSTLMH LC+ G V++AF L ERM
Sbjct: 181 NILIKGLCQFGKFDEAISLLHEMPKQECLPNVVTYSTLMHFLCQHGRVDKAFELFERMRK 240
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
E IDADTV +NILISGL ++GKV + + M +GCYPNS +YQ +L LL + F E
Sbjct: 241 EEIDADTVVYNILISGLCREGKVTIAFDMFKSMSSEGCYPNSGTYQVLLDSLLTSRNFTE 300
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
AK+LV M E + PSF SYK LI GLC+ +ED + K+MV QGF+PRMG W +++
Sbjct: 301 AKDLVCMMSAEGLRPSFSSYKLLIDGLCSVNCLEDGHLIFKQMVDQGFIPRMGTWTKLLT 360
Query: 382 --CVTFGKD--------NRNRVYVTETVDSLA 403
+T+ D NR V + E VD A
Sbjct: 361 SMSLTYTGDFLDNLIHLNRELVLLVEPVDQPA 392
>gi|218195588|gb|EEC78015.1| hypothetical protein OsI_17428 [Oryza sativa Indica Group]
Length = 363
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/339 (52%), Positives = 235/339 (69%), Gaps = 1/339 (0%)
Query: 42 DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL 101
D + +L+HKDWLSP E+LKIF+N+RDP + + R+DY PNEALY+L+I++L
Sbjct: 22 DDGYWIGRLDHKDWLSPNELLKIFANIRDPSLITGSFKRACDRRDYKPNEALYSLMIDRL 81
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWP 161
A +RF +E+++ R + E RFSD FFY +IK+YGN+A KAIETLF MP YNCWP
Sbjct: 82 ASCRRFSDVEEVLARARAESF-RFSDEFFYRLIKMYGNVANHPQKAIETLFAMPGYNCWP 140
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S KTFN VL++LV + Y + +Y SA++LGV +D CC NIL+KGLC+ G + A +L
Sbjct: 141 STKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFDDAISLL 200
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
E PKQ C PNV TYSTLM+ LC+ G V++AF L ERM+ E I AD V +NILISGL ++
Sbjct: 201 YEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYNILISGLCRE 260
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
+V E L + M KGCYPNS +YQ +L GLL +F EAK LV M ERM P F S+
Sbjct: 261 QRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPGFSSF 320
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
K LI GLC+ ++D VLK+MV+QGFVPR+G W ++V
Sbjct: 321 KLLIDGLCSVNCLDDAHLVLKQMVEQGFVPRVGTWTKLV 359
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/225 (17%), Positives = 88/225 (39%), Gaps = 37/225 (16%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +++ L ++++ + ++ + +L D +N++ G+ AI
Sbjct: 140 PSTKTFNYVLHMLVCKRQYEVVHEVY--LSASRLGVTLDTCCFNILVKGLCQFGKFDDAI 197
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLL----------------------VSAKLYG------ 180
L++MP C P+V T++ ++N L A +Y
Sbjct: 198 SLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYNILISGL 257
Query: 181 -------EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
E ++ S G ++ +LL GL +G A ++ + P
Sbjct: 258 CREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPGF 317
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
++ L+ GLC +++A +L++M +G T+ L++ +
Sbjct: 318 SSFKLLIDGLCSVNCLDDAHLVLKQMVEQGFVPRVGTWTKLVTSM 362
>gi|326527465|dbj|BAK08007.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/339 (51%), Positives = 234/339 (69%), Gaps = 1/339 (0%)
Query: 42 DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL 101
D H +L+H+DWL+P EVLKIF+++RD + SV + R+DY P+EALY L+I++L
Sbjct: 22 DDGHWIGRLDHRDWLAPNEVLKIFASIRDAALITSVFRKACARRDYKPSEALYGLMIDRL 81
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWP 161
A A+RF +E+++ R + E+ RFSD FFY +IK+YGN+A KA+ETL+ M Y CWP
Sbjct: 82 AGARRFGDVEELLARARAERF-RFSDDFFYRLIKMYGNVANHPEKAMETLYAMSEYGCWP 140
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S KTFN VL++LV + Y + +Y+SA +LGVE+D CC NIL+KGLC+ G A +L
Sbjct: 141 STKTFNYVLHMLVCRRQYEVVHEVYSSAPRLGVELDTCCFNILIKGLCQFGRFNEALSLL 200
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
DE PKQ+C PN TYSTLMH LC V+EAF L ERM E IDADTV +NIL+SGL ++
Sbjct: 201 DEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMRKEEIDADTVVYNILVSGLCRE 260
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G+V L + M +GC+PNS +YQ +L GL+ K F EAK+LVG M E + PSF SY
Sbjct: 261 GRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGLVASKNFVEAKDLVGMMSAESLRPSFSSY 320
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
K LI G C+ ++D VLK+MV QGFVPRM W +++
Sbjct: 321 KLLIDGFCSVNCLDDAHHVLKQMVDQGFVPRMSTWTKLL 359
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 1/229 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN-LEAAFY 219
PS + L+++ L A+ +G+++ + A L+K N E A
Sbjct: 69 PSEALYGLMIDRLAGARRFGDVEELLARARAERFRFSDDFFYRLIKMYGNVANHPEKAME 128
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
L + C P+ +T++ ++H L + E + G++ DT FNILI GL
Sbjct: 129 TLYAMSEYGCWPSTKTFNYVLHMLVCRRQYEVVHEVYSSAPRLGVELDTCCFNILIKGLC 188
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
+ G+ E + LL+ M + C PN+ +Y +++ L R EA EL RM E + V
Sbjct: 189 QFGRFNEALSLLDEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMRKEEIDADTV 248
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
Y L+ GLC + V + K M QG P G ++ ++ + K+
Sbjct: 249 VYNILVSGLCREGRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGLVASKN 297
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 107/228 (46%), Gaps = 8/228 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQ---RIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
P+ + +++ L ++++ + ++ R+ VE D +N++ GR +
Sbjct: 140 PSTKTFNYVLHMLVCRRQYEVVHEVYSSAPRLGVEL-----DTCCFNILIKGLCQFGRFN 194
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A+ L +MP +C P+ T++ +++ L E ++ K ++ D NIL+
Sbjct: 195 EALSLLDEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMRKEEIDADTVVYNILV 254
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC G + +A+ + Q C PN TY L+ GL N EA L+ M +E +
Sbjct: 255 SGLCREGRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGLVASKNFVEAKDLVGMMSAESLR 314
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
++ +LI G +++ +L++M +G P +++ ++L L
Sbjct: 315 PSFSSYKLLIDGFCSVNCLDDAHHVLKQMVDQGFVPRMSTWTKLLTSL 362
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+S+L++ K +D PN Y+ +++ L + R D ++ +R++ E++ +D YN+
Sbjct: 196 ALSLLDEMPK-QDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMRKEEI--DADTVVYNI 252
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ GR++ A + M S C P+ T+ ++L+ LV++K + E + + +
Sbjct: 253 LVSGLCREGRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGLVASKNFVEAKDLVGMMSAES 312
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ +L+ G C L+ A +VL + Q P + T++ L+ LC
Sbjct: 313 LRPSFSSYKLLIDGFCSVNCLDDAHHVLKQMVDQGFVPRMSTWTKLLTSLC 363
>gi|297723459|ref|NP_001174093.1| Os04g0618050 [Oryza sativa Japonica Group]
gi|222629567|gb|EEE61699.1| hypothetical protein OsJ_16179 [Oryza sativa Japonica Group]
gi|255675780|dbj|BAH92821.1| Os04g0618050 [Oryza sativa Japonica Group]
Length = 363
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/339 (52%), Positives = 236/339 (69%), Gaps = 1/339 (0%)
Query: 42 DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL 101
D + +L+HKDWLSP E+LKIF+N+RDP + S + R+DY PNEALY+++I++L
Sbjct: 22 DDGYWIGRLDHKDWLSPNELLKIFANIRDPSLITSSFKRACDRRDYKPNEALYSMMIDRL 81
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWP 161
A +RF +E+++ R + E+ RFSD FFY +IK+YGN+A KAIETLF MP YNCWP
Sbjct: 82 ASCRRFSDVEELLARARAERF-RFSDEFFYRLIKMYGNVANHPEKAIETLFAMPGYNCWP 140
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S KTFN VL++LV + Y + +Y SA++LGV +D CC NIL+KGLC+ G A +L
Sbjct: 141 STKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFGDAISLL 200
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
E PKQ C PNV TYSTLM+ LC+ G V++AF L ERM+ E I AD V +NILI+GL ++
Sbjct: 201 YEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYNILIAGLCRE 260
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
+V E L + M KGCYPNS +YQ +L GLL +F EAK LV M ERM P F S+
Sbjct: 261 QRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPGFSSF 320
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
K LI GLC+ ++D VLK+MV+QGFVPR+G W ++V
Sbjct: 321 KLLIDGLCSVNCLDDAHLVLKQMVEQGFVPRVGTWTKLV 359
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/225 (17%), Positives = 88/225 (39%), Gaps = 37/225 (16%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +++ L ++++ + ++ + +L D +N++ G+ AI
Sbjct: 140 PSTKTFNYVLHMLVCKRQYEVVHEVY--LSASRLGVTLDTCCFNILVKGLCQFGKFGDAI 197
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLL----------------------VSAKLYG------ 180
L++MP C P+V T++ ++N L A +Y
Sbjct: 198 SLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYNILIAGL 257
Query: 181 -------EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
E ++ S G ++ +LL GL +G A ++ + P
Sbjct: 258 CREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPGF 317
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
++ L+ GLC +++A +L++M +G T+ L++ +
Sbjct: 318 SSFKLLIDGLCSVNCLDDAHLVLKQMVEQGFVPRVGTWTKLVTSM 362
>gi|242074342|ref|XP_002447107.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
gi|241938290|gb|EES11435.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
Length = 363
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/342 (52%), Positives = 238/342 (69%), Gaps = 1/342 (0%)
Query: 42 DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL 101
D + +L+HKDWL+P EVLKIF+N+RDP + SV + R DY P+EALY+L+I+KL
Sbjct: 22 DDGYWMGRLDHKDWLAPNEVLKIFANIRDPSLINSVFKKACSRIDYKPSEALYSLMIDKL 81
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWP 161
A A+RF +E+++ + K EKL RFSD FFY +IK+YGN+A KAI+TLF MP YNCWP
Sbjct: 82 AFARRFSDVEELLSKAKTEKL-RFSDEFFYRLIKMYGNVAEHPQKAIDTLFAMPGYNCWP 140
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S KTFN VL++LV + Y + IY+SA +LGV +D C NIL+KGLC+ + A +L
Sbjct: 141 STKTFNYVLHMLVCKRQYEVVHEIYSSAPRLGVTLDTCSFNILVKGLCQCSKFDEAISLL 200
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
E PKQ C+PNV TYST MH LC++ V++AF L ERM + I ADTV +NILISGL ++
Sbjct: 201 HEMPKQGCQPNVATYSTFMHFLCQRSLVDKAFELFERMRKQDIAADTVVYNILISGLCRE 260
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
+V E L + M +GCYPNS +YQ +L GL+ +F EAK LV M E + PSF SY
Sbjct: 261 ERVSEAFDLFKSMTSEGCYPNSGTYQVLLDGLISLGKFFEAKSLVSTMSTEGVRPSFQSY 320
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
K LI GLC++ V+D VLK+MV QGFVPRMG W +++ +
Sbjct: 321 KLLIDGLCSEDCVDDAHLVLKQMVGQGFVPRMGTWTKLLTSI 362
>gi|38344321|emb|CAE02149.2| OSJNBa0058K23.3 [Oryza sativa Japonica Group]
gi|38345611|emb|CAD41894.2| OSJNBa0093O08.13 [Oryza sativa Japonica Group]
Length = 368
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 175/332 (52%), Positives = 231/332 (69%), Gaps = 1/332 (0%)
Query: 42 DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL 101
D + +L+HKDWLSP E+LKIF+N+RDP + S + R+DY PNEALY+++I++L
Sbjct: 22 DDGYWIGRLDHKDWLSPNELLKIFANIRDPSLITSSFKRACDRRDYKPNEALYSMMIDRL 81
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWP 161
A +RF +E+++ R + E+ RFSD FFY +IK+YGN+A KAIETLF MP YNCWP
Sbjct: 82 ASCRRFSDVEELLARARAERF-RFSDEFFYRLIKMYGNVANHPEKAIETLFAMPGYNCWP 140
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S KTFN VL++LV + Y + +Y SA++LGV +D CC NIL+KGLC+ G A +L
Sbjct: 141 STKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFGDAISLL 200
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
E PKQ C PNV TYSTLM+ LC+ G V++AF L ERM+ E I AD V +NILI+GL ++
Sbjct: 201 YEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYNILIAGLCRE 260
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
+V E L + M KGCYPNS +YQ +L GLL +F EAK LV M ERM P F S+
Sbjct: 261 QRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPGFSSF 320
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
K LI GLC+ ++D VLK+MV+QGFVPR+
Sbjct: 321 KLLIDGLCSVNCLDDAHLVLKQMVEQGFVPRL 352
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 119/259 (45%), Gaps = 6/259 (2%)
Query: 133 VIKIYGNM--AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
++KI+ N+ I+ + + D Y P+ ++++++ L S + + +++ + A
Sbjct: 41 LLKIFANIRDPSLITSSFKRACDRRDYK--PNEALYSMMIDRLASCRRFSDVEELLARAR 98
Query: 191 KLGVEIDACCLNILLKGLCENGN-LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
L+K N E A L P NC P+ +T++ ++H L K
Sbjct: 99 AERFRFSDEFFYRLIKMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQY 158
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E + G+ DT FNIL+ GL + GK + + LL M +GC PN +Y +
Sbjct: 159 EVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTTYSTL 218
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ L + +A EL RM E + V Y LI GLC ++ V + + K MV +G
Sbjct: 219 MNFLCQHGQVDKAFELCERMQKEDIVADAVVYNILIAGLCREQRVTEAFNLFKSMVPKGC 278
Query: 370 VPRMGMWREIV-GCVTFGK 387
P G ++ ++ G ++ GK
Sbjct: 279 YPNSGTYQVLLDGLLSSGK 297
>gi|413919532|gb|AFW59464.1| hypothetical protein ZEAMMB73_836837 [Zea mays]
Length = 365
Score = 361 bits (926), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 172/339 (50%), Positives = 231/339 (68%), Gaps = 1/339 (0%)
Query: 42 DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL 101
D + +L+HKDWL+P EVLK+F N+RD + SV + R+DY P+EALY+L+I++L
Sbjct: 22 DDGYWMGRLDHKDWLAPNEVLKVFVNIRDTSLINSVFKKACSRRDYKPSEALYSLMIDRL 81
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWP 161
A A+RF +E+++ + + EKL RFSD FFY +IK+YGN+A KA++TLF MP YNCWP
Sbjct: 82 ACARRFSDVEELLSKARTEKL-RFSDEFFYRLIKMYGNVAEHPQKAMDTLFAMPGYNCWP 140
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S KTFN VL++LV + Y + +Y+SA +LGV +D C NIL+KGLC+ G + A +L
Sbjct: 141 STKTFNYVLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCSFNILVKGLCQYGKFDEAISLL 200
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
E PKQ C+PN TYST MH LC++ V++AF L ERM + I ADTV +NILISGL +
Sbjct: 201 HEMPKQGCQPNATTYSTFMHFLCQRSQVDKAFELFERMRKQDIAADTVVYNILISGLCRD 260
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
+V E L + M +GC PNS +YQ +L GL+ + EAK LV M E + PSF SY
Sbjct: 261 ERVTEAFDLFKSMTSEGCCPNSGTYQVLLDGLISLGKLFEAKSLVCTMSTEGVRPSFQSY 320
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
K LI GLC+ V D VLK+MV QGFVPRMG W +++
Sbjct: 321 KLLIDGLCSDDCVGDAHLVLKQMVGQGFVPRMGTWTKLL 359
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/227 (18%), Positives = 85/227 (37%), Gaps = 37/227 (16%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +++ L ++++ + ++ +L D +N++ G+ +AI
Sbjct: 140 PSTKTFNYVLHMLVCKRQYEVVHEVYS--SAPRLGVTLDTCSFNILVKGLCQYGKFDEAI 197
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +MP C P+ T++ ++ L + ++ K + D NIL+ GL
Sbjct: 198 SLLHEMPKQGCQPNATTYSTFMHFLCQRSQVDKAFELFERMRKQDIAADTVVYNILISGL 257
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTL----------------------------- 239
C + + AF + + C PN TY L
Sbjct: 258 CRDERVTEAFDLFKSMTSEGCCPNSGTYQVLLDGLISLGKLFEAKSLVCTMSTEGVRPSF 317
Query: 240 ------MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ GLC V +A +L++M +G T+ L++ + K
Sbjct: 318 QSYKLLIDGLCSDDCVGDAHLVLKQMVGQGFVPRMGTWTKLLTSMFK 364
>gi|90399325|emb|CAJ86125.1| H0313F03.9 [Oryza sativa Indica Group]
Length = 466
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 171/328 (52%), Positives = 225/328 (68%), Gaps = 1/328 (0%)
Query: 42 DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL 101
D + +L+HKDWLSP E+LKIF+N+RDP + + R+DY PNEALY+L+I++L
Sbjct: 22 DDGYWIGRLDHKDWLSPNELLKIFANIRDPSLITGSFKRACDRRDYKPNEALYSLMIDRL 81
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWP 161
A +RF +E+++ R + E RFSD FFY +IK+YGN+A KAIETLF MP YNCWP
Sbjct: 82 ASCRRFSDVEEVLARARAESF-RFSDEFFYRLIKMYGNVANHPQKAIETLFAMPGYNCWP 140
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S KTFN VL++LV + Y + +Y SA++LGV +D CC NIL+KGLC+ G + A +L
Sbjct: 141 STKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFDDAISLL 200
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
E PKQ C PNV TYSTLM+ LC+ G V++AF L ERM+ E I AD V +NILISGL ++
Sbjct: 201 YEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYNILISGLCRE 260
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
+V E L + M KGCYPNS +YQ +L GLL +F EAK LV M ERM P F S+
Sbjct: 261 QRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPGFSSF 320
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
K LI GLC+ ++D VLK+MV+Q +
Sbjct: 321 KLLIDGLCSVNCLDDAHLVLKQMVEQAW 348
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 6/259 (2%)
Query: 133 VIKIYGNM--AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
++KI+ N+ I+ + + D Y P+ ++L+++ L S + + +++ + A
Sbjct: 41 LLKIFANIRDPSLITGSFKRACDRRDYK--PNEALYSLMIDRLASCRRFSDVEEVLARAR 98
Query: 191 KLGVEIDACCLNILLKGLCENGN-LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
L+K N + A L P NC P+ +T++ ++H L K
Sbjct: 99 AESFRFSDEFFYRLIKMYGNVANHPQKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQY 158
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E + G+ DT FNIL+ GL + GK ++ + LL M +GC PN +Y +
Sbjct: 159 EVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFDDAISLLYEMPKQGCVPNVTTYSTL 218
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ L + +A EL RM E ++ V Y LI GLC ++ V + + K MV +G
Sbjct: 219 MNFLCQHGQVDKAFELCERMQKEDIAADAVVYNILISGLCREQRVTEAFNLFKSMVPKGC 278
Query: 370 VPRMGMWREIV-GCVTFGK 387
P G ++ ++ G ++ GK
Sbjct: 279 YPNSGTYQVLLDGLLSSGK 297
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/212 (17%), Positives = 82/212 (38%), Gaps = 37/212 (17%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +++ L ++++ + ++ + +L D +N++ G+ AI
Sbjct: 140 PSTKTFNYVLHMLVCKRQYEVVHEVY--LSASRLGVTLDTCCFNILVKGLCQFGKFDDAI 197
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLL----------------------VSAKLYG------ 180
L++MP C P+V T++ ++N L A +Y
Sbjct: 198 SLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYNILISGL 257
Query: 181 -------EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
E ++ S G ++ +LL GL +G A ++ + P
Sbjct: 258 CREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPGF 317
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
++ L+ GLC +++A +L++M + D
Sbjct: 318 SSFKLLIDGLCSVNCLDDAHLVLKQMVEQAWD 349
>gi|356555104|ref|XP_003545878.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Glycine max]
Length = 395
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 175/380 (46%), Positives = 245/380 (64%), Gaps = 5/380 (1%)
Query: 24 TITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSK 83
T TR F+L+ S + +L HKDWL+P E + ++L P S ++ + Y+
Sbjct: 17 TSTRFLLFSLSQFSTTPNRDTAILARLKHKDWLTPKEATTLLTSLTHPSSTLTFFHLYTS 76
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RKD++P+E L T +I+KLAQA + + I + Q + + RFSD FFY +IK Y + R
Sbjct: 77 RKDFHPSEPLCTTLISKLAQAHQLNPILTLHQTLTKRR--RFSDDFFYTLIKAYAHSFQR 134
Query: 144 ISKAIETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A++TL DM S ++C PS +TFN VLN+LV+ +LY + ++ A LGV DAC LN
Sbjct: 135 VDMALQTLHDMNSLFHCSPSTRTFNFVLNVLVNTRLYAAARELFLHAPPLGVSPDACTLN 194
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++KGLC G ++AAF VL+EF + CE N RTY+TLM GLCEKG VEEAFGLLE+ME E
Sbjct: 195 IVIKGLCARGEMDAAFGVLEEFHELGCEANARTYATLMKGLCEKGRVEEAFGLLEKMEEE 254
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G++ D +N+LI GLRK G+V+EG ++LE M G+G PN +Y EVL GL++K R E
Sbjct: 255 GVETDVAVYNVLIGGLRKVGRVDEGWRVLEGMVGRGVCPNEGTYNEVLCGLVEKGRVEEG 314
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
K +V RM + PSF +YK L+ G C + LV +V+WV+ M +GFVP+MGMWR IV C
Sbjct: 315 KGVVERMGNKGFVPSFGAYKDLVKGFCEKGLVGEVEWVVWDMAWKGFVPKMGMWRRIVKC 374
Query: 383 VTFGKDNRNRVYVTETVDSL 402
V R+ +V +D +
Sbjct: 375 VV--DRERSDGWVVGAIDGV 392
>gi|440577332|emb|CCI55338.1| PH01B019A14.7 [Phyllostachys edulis]
Length = 359
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 143/269 (53%), Positives = 190/269 (70%), Gaps = 1/269 (0%)
Query: 42 DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL 101
D + +L+HKDWL+P EVLKIF+N+RDP + + R+DY PNE LY+L+I+++
Sbjct: 22 DDSYWMGRLDHKDWLAPNEVLKIFANIRDPSLITRAFKRACTRRDYKPNETLYSLMIDRI 81
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWP 161
A A+RF +E+++ R ++EK RFSD FFY +IK+YGN+A KAIETLF MP YNCWP
Sbjct: 82 ACARRFGDVEELLARARIEKF-RFSDEFFYRLIKMYGNVANHPEKAIETLFAMPGYNCWP 140
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S KTFN VL++LV + Y + +Y+SA +LGV +D CC NIL+KGLC+ G + A +L
Sbjct: 141 STKTFNYVLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCCFNILVKGLCQLGKFDEAISLL 200
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
E PKQ C PNV TYSTLMH LC+ G V+EAF L ERM E I ADTV +NILISGL ++
Sbjct: 201 HEMPKQGCLPNVNTYSTLMHFLCQHGQVDEAFELFERMWKEDIAADTVVYNILISGLCRE 260
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVL 310
G+V + L + M +GCYPNS +YQ +
Sbjct: 261 GRVTKAFDLFKSMASEGCYPNSGTYQLIF 289
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 114/250 (45%), Gaps = 5/250 (2%)
Query: 133 VIKIYGNM--AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
V+KI+ N+ I++A + Y P+ ++L+++ + A+ +G+++ + A
Sbjct: 41 VLKIFANIRDPSLITRAFKRACTRRDYK--PNETLYSLMIDRIACARRFGDVEELLARAR 98
Query: 191 KLGVEIDACCLNILLKGLCENGN-LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
L+K N E A L P NC P+ +T++ ++H L K
Sbjct: 99 IEKFRFSDEFFYRLIKMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQY 158
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E + G+ DT FNIL+ GL + GK +E + LL M +GC PN +Y +
Sbjct: 159 EVVHEVYSSAPRLGVTLDTCCFNILVKGLCQLGKFDEAISLLHEMPKQGCLPNVNTYSTL 218
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
++ L + EA EL RM E ++ V Y LI GLC + V + K M +G
Sbjct: 219 MHFLCQHGQVDEAFELFERMWKEDIAADTVVYNILISGLCREGRVTKAFDLFKSMASEGC 278
Query: 370 VPRMGMWREI 379
P G ++ I
Sbjct: 279 YPNSGTYQLI 288
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 226 KQNCEPNVRTYSTLMHGL-CEK--GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
+++ +PN YS ++ + C + G+VEE LL R E F LI + G
Sbjct: 64 RRDYKPNETLYSLMIDRIACARRFGDVEE---LLARARIEKFRFSDEFFYRLI---KMYG 117
Query: 283 KV----EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
V E+ ++ L M G C+P++ ++ VL+ L+ K+++ E+ ++
Sbjct: 118 NVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAPRLGVTLDT 177
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ L+ GLC ++ +L +M +QG +P + + ++
Sbjct: 178 CCFNILVKGLCQLGKFDEAISLLHEMPKQGCLPNVNTYSTLM 219
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
IS+L++ K+ PN Y+ +++ L Q + D ++ +R+ E + +D YN+
Sbjct: 196 AISLLHEMPKQGCL-PNVNTYSTLMHFLCQHGQVDEAFELFERMWKEDIA--ADTVVYNI 252
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+ GR++KA + M S C+P+ T+ L+ S+
Sbjct: 253 LISGLCREGRVTKAFDLFKSMASEGCYPNSGTYQLIFTSAFSS 295
>gi|308080822|ref|NP_001183560.1| uncharacterized protein LOC100502153 [Zea mays]
gi|238013086|gb|ACR37578.1| unknown [Zea mays]
Length = 243
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 144/200 (72%), Gaps = 1/200 (0%)
Query: 49 KLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD 108
+L+HKDWL+P EVLK+F N+RD + SV + R+DY P+EALY+L+I++LA A+RF
Sbjct: 29 RLDHKDWLAPNEVLKVFVNIRDTSLINSVFKKACSRRDYKPSEALYSLMIDRLACARRFS 88
Query: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL 168
+E+++ + + EKL RFSD FFY +IK+YGN+A KA++TLF MP YNCWPS KTFN
Sbjct: 89 DVEELLSKARTEKL-RFSDEFFYRLIKMYGNVAEHPQKAMDTLFAMPGYNCWPSTKTFNY 147
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
VL++LV + Y + +Y+SA +LGV +D C NIL+KGLC+ G + A +L E PKQ
Sbjct: 148 VLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCSFNILVKGLCQYGKFDEAISLLHEMPKQG 207
Query: 229 CEPNVRTYSTLMHGLCEKGN 248
C+PN TYST MH LC++
Sbjct: 208 CQPNATTYSTFMHFLCQRSQ 227
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL----EA 216
PS ++L+++ L A+ + +++ + + A + L+K GN+ +
Sbjct: 69 PSEALYSLMIDRLACARRFSDVEELLSKARTEKLRFSDEFFYRLIKMY---GNVAEHPQK 125
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A L P NC P+ +T++ ++H L K E + G+ DT +FNIL+
Sbjct: 126 AMDTLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCSFNILVK 185
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
GL + GK +E + LL M +GC PN+ +Y ++ L + +
Sbjct: 186 GLCQYGKFDEAISLLHEMPKQGCQPNATTYSTFMHFLCQRSQ 227
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 7/150 (4%)
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
+++ +P+ YS ++ L + LL + +E + F LI + G V
Sbjct: 64 RRDYKPSEALYSLMIDRLACARRFSDVEELLSKARTEKLRFSDEFFYRLI---KMYGNVA 120
Query: 286 E----GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
E M L M G C+P++ ++ VL+ L+ K+++ E+ ++ S+
Sbjct: 121 EHPQKAMDTLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCSF 180
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ GLC ++ +L +M +QG P
Sbjct: 181 NILVKGLCQYGKFDEAISLLHEMPKQGCQP 210
>gi|356546778|ref|XP_003541799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g14580, mitochondrial-like [Glycine max]
Length = 282
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/261 (44%), Positives = 161/261 (61%), Gaps = 24/261 (9%)
Query: 143 RISKAIETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ A++TL DM S ++C PS +TFN VLN+L++ +LY + ++ A +L V DAC L
Sbjct: 42 RVDMALQTLHDMNSLFHCPPSTRTFNFVLNVLLNTRLYAAARELFLRAPRLRVSPDACTL 101
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NI++KGLC G ++AAF VL++F + CE N RTY+TLM G F LLERME
Sbjct: 102 NIVIKGLCARGEMDAAFRVLEDFXELGCEANARTYATLMKG----------FELLERMEV 151
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G++AD +N+LI GLRK G+V EGM +G PN EVL GL++K R E
Sbjct: 152 GGVEADVAVYNVLIGGLRKVGRVLEGMVR------RGVCPN-----EVLCGLVEKGRVEE 200
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
K +V RM E PSF +YK L+ G C + + +V+WV++ MV +GFVP+MGM R IV
Sbjct: 201 GKGVVERMGKEGFVPSFGAYKGLVKGFCEKGRIGEVEWVVRDMVWKGFVPKMGMRRRIVK 260
Query: 382 CVTFGKDNRNRVYVTETVDSL 402
CV + R+ +V +D +
Sbjct: 261 CVV--ERERSDEWVAGAIDGV 279
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 183/330 (55%), Gaps = 2/330 (0%)
Query: 51 NHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
NH L+P V K+ ++ D + + + S++ + + + Y +I KL +A++F +
Sbjct: 93 NHSRMLTPARVHKLIASQTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTM 152
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
E ++Q+++ + C ++ G F ++I+IYG + G ++AI+ M + P K FN++L
Sbjct: 153 EGLIQQMRKDG-CPYTPGLFVDIIEIYGEV-GMPNEAIKAFHQMLEFGYEPLAKHFNVLL 210
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
+L+ K ++ + G+ + NIL++ C + L A+++ ++ KQ C
Sbjct: 211 IVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCI 270
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P+V TYS LM GLC K V+ A G+L+ M ++G D +T+N L++ L ++ + E +L
Sbjct: 271 PDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRL 330
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L +MK GC P+ +Y V+ G + R +A +++ M P+ +SY+ L++GLCN
Sbjct: 331 LSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCN 390
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++ +++M+ GF+P + ++ ++
Sbjct: 391 EGKFDEAKDFVEEMISNGFIPHISIYHLLI 420
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 106/232 (45%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN++ + ++S A M C P V+T+++++ L G+
Sbjct: 241 YNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEML 300
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G DA N LL LC NL A+ +L + C P+V Y+T++ G C +G
Sbjct: 301 NKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRAL 360
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A +L M G + +++ L++GL +GK +E +E M G P+ + Y ++
Sbjct: 361 DACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLI 420
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
GL ++ + EA E++ M + ++P ++ L+ +C E + V K
Sbjct: 421 TGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRICEDSQTEARELVDK 472
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 102/262 (38%), Gaps = 19/262 (7%)
Query: 1 MILRSHFARNHRQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAY----KLNHKDWL 56
++L H S+ + L RT+ + + H D HAY K++ + +
Sbjct: 211 IVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCI 270
Query: 57 SPTEVLKIF-------SNLRDPISVIS-VLNQYSKRKDYNPNEALYTLIINKLAQAKRFD 108
E I S ++ + V+ +LN K Y P+ Y ++N L +
Sbjct: 271 PDVETYSILMQGLCRKSQVKTALGVLDEMLN-----KGYVPDALTYNTLLNSLCRKMNLR 325
Query: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL 168
++ ++KV C D YN + GR A + L DMP C P+ ++
Sbjct: 326 EAYRLLSKMKVMG-CN-PDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRT 383
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
++N L + + E + G ++L+ GLC G + A VL KQ
Sbjct: 384 LVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQT 443
Query: 229 CEPNVRTYSTLMHGLCEKGNVE 250
P+ T+S L+ +CE E
Sbjct: 444 LAPHESTWSVLLMRICEDSQTE 465
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 172/314 (54%), Gaps = 6/314 (1%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
++S +K+ N RDP + + N S+++ +N N A Y II LA+ K+F AI+ ++
Sbjct: 47 YISHETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVL 106
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFNLVLNLL 173
++ + C+ +G F N++K + + + ++ + + S PS+K + LNLL
Sbjct: 107 HQMTYDT-CKVHEGIFLNLMKHFSKSSMH-ERVLDMFYAIKSIVREKPSLKAISTCLNLL 164
Query: 174 VSAKLYGEIQGIYTSA-AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE-P 231
V + + + +A +KL + + C NIL+K C NG+L+AAF V+ E P
Sbjct: 165 VESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYP 224
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMES-EGIDADTVTFNILISGLRKQGKVEEGMKL 290
N+ TYSTL+ GLCE G ++EA E M S + I D +T+NILI+G ++GKV+ +
Sbjct: 225 NLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTI 284
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
LE MK GC PN +Y ++ G + R EAKE+ + M P +SY LI+ LC
Sbjct: 285 LEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCR 344
Query: 351 QKLVEDVDWVLKKM 364
V++ +L++M
Sbjct: 345 TGRVDEATELLQQM 358
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 134/264 (50%), Gaps = 4/264 (1%)
Query: 142 GRISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ +AIE +M S N P T+N+++N + I G +
Sbjct: 240 GKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFN 299
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
++L+ G C+ G L+ A V +E +P+ +Y+TL++ LC G V+EA LL++M+
Sbjct: 300 YSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMK 359
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ ADTVTFN+++ GL ++G+ +E + +++++ +G Y N SY+ VL L K
Sbjct: 360 DKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELR 419
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A EL+G M+ P + L+ LCN +V+D L +++ GF P W +V
Sbjct: 420 KATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLV 479
Query: 381 GCVTFGKDNRNRVYVTETVDSLAS 404
+ R + V E +D L +
Sbjct: 480 DLIC---RERKMLPVFELLDVLVT 500
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 139/290 (47%), Gaps = 4/290 (1%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
S R Y PN Y+ +I L + + +AIE + + + + D YN++
Sbjct: 218 SARVSY-PNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNI--LPDALTYNILINGFCQ 274
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ +A L M S C P+V +++++N E + ++ LG++ D
Sbjct: 275 RGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTIS 334
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ LC G ++ A +L + ++C + T++ ++ GLC +G +EA +++++
Sbjct: 335 YTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLP 394
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
EG + ++ I+++ L ++G++ + +LL M +G P+ A+ +L L +
Sbjct: 395 FEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVK 454
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+A E + ++ P S+ L+ +C ++ + V +L +V Q ++
Sbjct: 455 DAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFELLDVLVTQEYL 504
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 182/333 (54%), Gaps = 4/333 (1%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
SP+ V K+ ++ DP+ + + S + ++ + + + ++I KL A++F ++D++ R
Sbjct: 13 SPSRVQKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMR 72
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+K E+ + F ++I+IYG A +A++T M ++ P K N +L LLVS
Sbjct: 73 LKSEQY-SINPSLFSDIIEIYGE-ANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLLVSH 130
Query: 177 KLYGEIQ-GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ Y ++ SA + GV D NIL+ C NG+L A+ + ++ K++ P+V +
Sbjct: 131 RNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVES 190
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y LM GLC K V A LLE M ++G D +++ L++ L ++ K++E KLL RMK
Sbjct: 191 YRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMK 250
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
KGC P+ Y V+ G + R +A +++ M SP+ +SY L+ GLC+Q L +
Sbjct: 251 VKGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYD 310
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
+ +++M+ +GF P ++ ++ G GK
Sbjct: 311 EAKNYVEEMLSKGFSPHFSVFHALINGFCNVGK 343
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 183/351 (52%), Gaps = 12/351 (3%)
Query: 56 LSPTEVLKIFSNLRD----PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIE 111
++P++V ++ RD I S +YS + + + ++I+KL A F E
Sbjct: 13 ITPSKVEQLLRAERDLRKAKIIFDSASAEYSN--GFRHDHTTFGVMISKLVSANEFRPAE 70
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+++ R+K EK CR ++ F ++ + YG + + AI M + C P+ K++ V
Sbjct: 71 EMLNRMKEEK-CRITEEIFLSICRGYGRVHMPLD-AIRVFHKMNDFGCKPTDKSYISVFA 128
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN-GNLEAAFYVLDEFPKQNCE 230
+LV Y ++GV LN+L+K LC+N G ++AAF + E PK+ C+
Sbjct: 129 ILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCD 188
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P+ TY TL++GLC+ G EA L + M+++G VT++ L+ GL + G V+E M L
Sbjct: 189 PDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGL 248
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
++MK K PN +Y ++ GL EA EL+ M+ +R P+ V+Y LI+GLC
Sbjct: 249 FDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCK 308
Query: 351 Q-KLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETV 399
+ KL E V+ L +M QG P G++ +I+ G K Y+ E V
Sbjct: 309 EGKLAEAVE-TLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMV 358
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 7/257 (2%)
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+IK +G I A E +MP C P T+ ++N L E + ++
Sbjct: 161 LIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTK 220
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G + L+ GLC+ GN++ A + D+ K+ EPNV TYS+LM GLC+ G EA
Sbjct: 221 GCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEA 280
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LLE M + + VT++ LI+GL K+GK+ E ++ L+RMK +G P++ Y +++ G
Sbjct: 281 MELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIING 340
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYK-------KLIHGLCNQKLVEDVDWVLKKMV 365
+ ++F EA + M+ ++SP+ V++ ++ GLC + + M
Sbjct: 341 FCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMR 400
Query: 366 QQGFVPRMGMWREIVGC 382
+G G + +V C
Sbjct: 401 TRGISIDAGTFDSLVKC 417
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 9/249 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +P+ Y+ +++ L QA D + ++K + + + F Y+ + G
Sbjct: 220 KGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAI--EPNVFTYSSLMDGLCKNGGS 277
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+E L M P++ T++ ++N L E G++ DA +
Sbjct: 278 LEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKI 337
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS-------TLMHGLCEKGNVEEAFGLLE 257
+ G C + A LDE PN T+S ++ GLC GN+ +F L
Sbjct: 338 INGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYI 397
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M + GI D TF+ L+ K+G + + ++ + M GC P+ + V+ G D++
Sbjct: 398 GMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRR 457
Query: 318 RFPEAKELV 326
+ EA E +
Sbjct: 458 KVREAFESI 466
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 171/328 (52%), Gaps = 5/328 (1%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKR--KDYNPNEALYTLIINKLAQAKRFDAIEDI 113
++P++V+K+ +D I+V + + Y +++ + ++++L A +F A EDI
Sbjct: 14 ITPSQVIKLMRAEKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFKAAEDI 73
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ R+K+E C S+ ++ + YG + R ++ M ++C PS K + VL +L
Sbjct: 74 VARMKIEN-CVVSEDILLSICRGYGRVH-RPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 131
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN-GNLEAAFYVLDEFPKQNCEPN 232
V Y + ++G+ LN+L+K LC N G ++A + E PK+ C+P+
Sbjct: 132 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPD 191
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TY TL+ GLC G ++EA L M + VT+ LI+GL V+E M+ +E
Sbjct: 192 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVE 251
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
MKGKG PN +Y ++ GL R +A EL M+ P+ V+Y LI GLC ++
Sbjct: 252 EMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ 311
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+++ +L +M QG P G++ +++
Sbjct: 312 KIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 41/281 (14%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + ++ +MP C P T+ +++ L E + ++T +
Sbjct: 171 GTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC + N++ A ++E + EPNV TYS+LM GLC+ G +A L E M +
Sbjct: 231 TSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + VT+ LI+GL K+ K++E ++LL+RM +G P++ Y +V+ G +F E
Sbjct: 291 RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFRE 350
Query: 322 AKELVGRMICERMSPSFVSY-------KKLIHGLCNQKL------------------VED 356
A + MI ++P+ +++ +++ GLC VE
Sbjct: 351 AANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLSMRSRGISVEVET 410
Query: 357 VDWVLK----------------KMVQQGFVPRMGMWREIVG 381
+D ++K ++V G +P G W+ ++G
Sbjct: 411 LDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIG 451
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 10/247 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD P YT +IN L +K D ++ +K + + + F Y+ + GR
Sbjct: 221 KDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGI--EPNVFTYSSLMDGLCKDGRS 278
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+E M + C P++ T+ ++ L + E + G++ DA +
Sbjct: 279 LQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKV 338
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPN-------VRTYSTLMHGLCEKGNVEEAFGLLE 257
+ G C A LDE PN V+T + ++ GLC AF L
Sbjct: 339 ISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTN-YPSRAFTLYL 397
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M S GI + T + L+ L K+G+ ++ ++L++ + GC PN +++ ++ LD
Sbjct: 398 SMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNT 457
Query: 318 RFPEAKE 324
EA +
Sbjct: 458 IVGEASD 464
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 10/177 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN YT +I L + ++ +++ R+ ++ L + G + VI + ++ + +A
Sbjct: 295 PNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGL-KPDAGLYGKVISGFCAVS-KFREAA 352
Query: 149 ETLFDM------PSYNCWP-SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
L +M P+ W VKT N V+ L + +Y S G+ ++ L
Sbjct: 353 NFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCT-NYPSRAFTLYLSMRSRGISVEVETL 411
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+ L+K LC+ G + A ++DE C PN T+ L+ + V EA L R
Sbjct: 412 DSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNTIVGEASDSLLR 468
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 175/315 (55%), Gaps = 8/315 (2%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
++S + + DP + + N+ ++++ ++ N A Y I++KLA++K+F AI+ ++
Sbjct: 57 FISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVL 116
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM--PSYNCWPSVKTFNLVLNL 172
++ E C+F +G F N++K + ++ + + + +FD P PS+K + LNL
Sbjct: 117 HQMTYET-CKFHEGIFLNLMKHFSKLS--LHERVVEMFDAIRPIVREKPSLKAISTCLNL 173
Query: 173 LVSAKLYGEIQGIYTSAAK-LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE- 230
LV + + ++ K L +E + C NIL+K C+NG++++AF V++E K +
Sbjct: 174 LVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSY 233
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMES-EGIDADTVTFNILISGLRKQGKVEEGMK 289
PN+ TYSTL++GLC G ++EA L E M S + I D +T+N LI+G KV+ +K
Sbjct: 234 PNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALK 293
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
++E MK GC PN +Y ++ G + R EAKE+ M + P V Y LI+ C
Sbjct: 294 IMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFC 353
Query: 350 NQKLVEDVDWVLKKM 364
V++ +LK M
Sbjct: 354 RAGRVDEAMELLKDM 368
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 144/299 (48%), Gaps = 2/299 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + PN ++ +++ + D+ ++++ +K + + + Y+ + +G
Sbjct: 192 KSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHV-SYPNLITYSTLINGLCGSG 250
Query: 143 RISKAIETLFDMPSYN-CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ +AIE +M S + P T+N ++N + I K G +
Sbjct: 251 RLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNY 310
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L+ G C+ G LE A V DE +P+ Y+TL++ C G V+EA LL+ M
Sbjct: 311 SALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRE 370
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
ADTVTFN+++ GL ++G+ EE +LER+ +G Y N ASY+ VL L + +
Sbjct: 371 NKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQK 430
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +LVG M+ + P F + +L+ LC V D L +++ GF P W +V
Sbjct: 431 ATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLV 489
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 145/300 (48%), Gaps = 5/300 (1%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDG 128
D S V+ + K PN Y+ +IN L + R +AIE + + +++ D
Sbjct: 215 DIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQI--LPDA 272
Query: 129 FFYNVIKIYGNMAG-RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
YN + I G G ++ +A++ + M C P+V ++ ++N E + ++
Sbjct: 273 LTYNAL-INGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFD 331
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
LG++ D L+ C G ++ A +L + + C + T++ ++ GLC +G
Sbjct: 332 EMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREG 391
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
EEA G+LER+ EG+ + ++ I+++ L ++G++++ +L+ M G+G P+ A+
Sbjct: 392 RFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSN 451
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
E+L L + + +A + ++ P S+ L+ +C ++ + +L +V Q
Sbjct: 452 ELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLVIQ 511
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 176/325 (54%), Gaps = 2/325 (0%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
SPT V K+ ++ DP+ + + S + ++ N + Y ++I K ++K F ++D+++R
Sbjct: 41 SPTRVQKLIASQSDPLLAKEIFDYASLQPNFRHNYSTYLILILKFGRSKHFSLLDDLLRR 100
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+K E + F +IKIYG A KA+ T + M +N P K N +L++LVS
Sbjct: 101 LKSESSQPITPTLFSYLIKIYGE-ANLPDKALNTFYIMLQFNIKPLTKHLNRILDILVSH 159
Query: 177 KLYGEIQ-GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ Y ++ A K GV D NIL++ C NG++ A+ + ++ K++ P++++
Sbjct: 160 RNYLRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQS 219
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y LM LC K V A L E M ++G D+ T+ L++ L ++ K+ E KLL RMK
Sbjct: 220 YRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMK 279
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
KGC P+ Y V+ G + R +A +++ M P+ VSY+ L++GLC+ +++
Sbjct: 280 VKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLD 339
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
+ +++M+ +GF P + +V
Sbjct: 340 EATKYVEEMLSKGFSPHFAVIHALV 364
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 110/242 (45%)
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
F D YN++ + G IS A M + P ++++ +++ L
Sbjct: 179 FPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVD 238
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
++ G D+ LL LC L A+ +L + C P++ Y+T++ G C
Sbjct: 239 LFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFC 298
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+G +A +++ M++ G + V++ L++GL G ++E K +E M KG P+ A
Sbjct: 299 REGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPHFA 358
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ G + R EA ++ + + R +P ++ ++ +C +D VL+++
Sbjct: 359 VIHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMIIVPQICEVDDGVKIDGVLEEV 418
Query: 365 VQ 366
++
Sbjct: 419 LK 420
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P+ YT ++N L + K+ ++ R+KV K C D YN + + GR
Sbjct: 246 KGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKV-KGCN-PDIVHYNTVILGFCREGRA 303
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + + DM + C P++ ++ ++N L + E G ++ L
Sbjct: 304 HDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPHFAVIHAL 363
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+KG C G +E A VL + + P+ T+ ++ +CE + + G+LE + I
Sbjct: 364 VKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMIIVPQICEVDDGVKIDGVLEEVLKIEI 423
Query: 265 DADT 268
DT
Sbjct: 424 KGDT 427
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 174/333 (52%), Gaps = 9/333 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLN----QYSKRKDYNPNEALYTLIINKLAQAKRFDAIE 111
++PT V ++ RD + + + +Y+ ++ N ++L+I+KL A +F E
Sbjct: 42 VTPTHVQQLIQAERDIKKALIIFDSATAEYANGFKHDLNT--FSLMISKLISANQFRLAE 99
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
++ R+K EK+ ++ ++ + YG + + +I M ++C P+ K++ VL
Sbjct: 100 TLLDRMKEEKI-DVTEDILLSICRAYGRIHKPLD-SIRVFHKMQDFHCKPTEKSYISVLA 157
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN-GNLEAAFYVLDEFPKQNCE 230
+LV Y K+G+ LN+L+K C+N G ++ A ++ CE
Sbjct: 158 ILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCE 217
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P+ TY TL++GLC ++ EA LL+ ME++G VT+ +I GL + V+E M+L
Sbjct: 218 PDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRL 277
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
LE MK K PN +Y ++ G A++++ MI +R+ P+ +SY L++GLCN
Sbjct: 278 LEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCN 337
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ + + + +M QGF P G++ +IV C+
Sbjct: 338 EGKINEALEIFDRMKLQGFKPDAGLYGKIVNCL 370
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 135/292 (46%), Gaps = 42/292 (14%)
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+IK + +G + KA+ M ++ C P T+ ++N L + E + +
Sbjct: 190 LIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETK 249
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G ++ GLC+ N++ A +L++ +N EPNV TYS+LM G C+ G+ A
Sbjct: 250 GCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRA 309
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+LE M + + + ++++ L++GL +GK+ E +++ +RMK +G P++ Y +++
Sbjct: 310 RDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNC 369
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSY-------KKLIHGL----------------- 348
L D RF EA + M+ + P+ +++ ++IHGL
Sbjct: 370 LCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVL 429
Query: 349 ------------------CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
CN+K + +L +MV G +P+ MW +V C
Sbjct: 430 TRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNC 481
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I +A E L +M + C PSV T+ +++ L E + +E + +
Sbjct: 236 IVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSS 295
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C+ G+ A +L+ ++ PN+ +YSTL++GLC +G + EA + +RM+ +G
Sbjct: 296 LMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQG 355
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY-------QEVLYGLL-- 314
D + +++ L + +E L+ M G PN ++ V++GL
Sbjct: 356 FKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTI 415
Query: 315 ---------------------------------DKKRFPEAKELVGRMICERMSPSFVSY 341
+KK P+ ++ M+ P +
Sbjct: 416 NNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMW 475
Query: 342 KKLIHGLCNQK 352
+++ C+++
Sbjct: 476 STMVNCFCDER 486
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 9/256 (3%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q + K +P+ YT II+ L Q D +++ +K + + + F Y+ +
Sbjct: 242 LLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNI--EPNVFTYSSLMDG 299
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
G S+A + L M P++ +++ +LN L + E I+ G + D
Sbjct: 300 FCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPD 359
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN-------VRTYSTLMHGLCEKGNVE 250
A ++ LC+ + A LDE +PN VRT++ ++HGLC N
Sbjct: 360 AGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSN 419
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
AF L + + GI TFN L+ + + + ++L+ M GC P + ++
Sbjct: 420 RAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMV 479
Query: 311 YGLLDKKRFPEAKELV 326
D+++ +A +L+
Sbjct: 480 NCFCDERKACDAMKLL 495
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 9/181 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K PN Y+ ++N L + + +I R+K++ + G + ++ +++ R
Sbjct: 318 QKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGF-KPDAGLYGKIVNCLCDVS-R 375
Query: 144 ISKAIETLFDM------PSYNCWP-SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+A L +M P+ W V+T N V++ L + +Y S G+ I
Sbjct: 376 FQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISI 435
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
N LLK C +L +LDE C P +ST+++ C++ +A LL
Sbjct: 436 TVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAMKLL 495
Query: 257 E 257
+
Sbjct: 496 Q 496
>gi|449441228|ref|XP_004138384.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
gi|449499186|ref|XP_004160743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
Length = 482
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 173/325 (53%), Gaps = 3/325 (0%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
SP V K+ ++ DP+ + + ++ + P+ + ++I KL ++K F I+D++
Sbjct: 72 SPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSLLVLILKLGRSKYFSLIDDLLLS 131
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
K + F Y +IKIYG A KA++ + M + C PS K N +L +LVS
Sbjct: 132 FKSRRYPVTPTAFSY-IIKIYGE-ADLPDKALKVFYTMIDFGCTPSSKQLNRILEILVSH 189
Query: 177 KLYGEIQ-GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ + ++ +A GV + NIL++ C NGN+ A+ + ++ ++N P+V T
Sbjct: 190 RNFIRPAFDLFKNARHHGVLPNTKSYNILIRAFCWNGNISIAYTLFNKMFERNVIPDVET 249
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y TLM GLC K V A LLE M ++G DT+++ L++ L ++ K+ E KLL RMK
Sbjct: 250 YRTLMQGLCRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLREAYKLLCRMK 309
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
KGC P+ A Y V+ G + R +A +++ M P+ VSY+ L +GLC+Q + E
Sbjct: 310 VKGCNPDIAHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVSYESLTNGLCDQGMFE 369
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
+++M +GF P + +V
Sbjct: 370 LAKGYVEEMTLKGFYPHFSVIHALV 394
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K Y P+ Y ++N L + K+ ++ R+KV K C D YN + + GR
Sbjct: 276 KGYIPDTLSYATLLNSLCRKKKLREAYKLLCRMKV-KGCN-PDIAHYNTVIMGFCREGRA 333
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + L DM S C P++ ++ + N L ++ +G G ++ L
Sbjct: 334 LDACKILEDMQSNGCLPNLVSYESLTNGLCDQGMFELAKGYVEEMTLKGFYPHFSVIHAL 393
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+KG G + + VL++ K+ P+ T+ ++ G+CE + + + E++ + +
Sbjct: 394 VKGFHSIGRIHESCSVLEDMLKRGKAPHSDTWEIIISGICEVEDTAKFCEVWEKILKKDV 453
Query: 265 DADT 268
DT
Sbjct: 454 RRDT 457
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 169/328 (51%), Gaps = 5/328 (1%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKR--KDYNPNEALYTLIINKLAQAKRFDAIEDI 113
++P++V+K+ +D ++V + + Y +++ + ++ +L A +F A ED+
Sbjct: 14 ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ R+K+E C S+ ++ + YG + R ++ M ++C PS K + VL +L
Sbjct: 74 IVRMKIEN-CVVSEDILLSICRGYGRVH-RPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 131
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN-GNLEAAFYVLDEFPKQNCEPN 232
V Y + ++G+ LN+L+K LC N G ++A + E PK+ C+P+
Sbjct: 132 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 191
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TY TL+ GLC G ++EA L M + VT+ LI+GL V+E M+ LE
Sbjct: 192 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLE 251
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
MK KG PN +Y ++ GL R +A EL M+ P+ V+Y LI GLC ++
Sbjct: 252 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ 311
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+++ +L +M QG P G++ +++
Sbjct: 312 KIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 127/285 (44%), Gaps = 49/285 (17%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + ++ +MP C P T+ +++ L E + ++T +
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC + N++ A L+E + EPNV TYS+LM GLC+ G +A L E M +
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + VT+ LI+GL K+ K++E ++LL+RM +G P++ Y +V+ G +F E
Sbjct: 291 RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFRE 350
Query: 322 AKELVGRMICERMSPSFVSY-------KKLIHGLCN------------------------ 350
A + MI ++P+ +++ +++ GLC
Sbjct: 351 AANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVET 410
Query: 351 --------------QKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
QK V+ VD ++V G +P G W+ ++G
Sbjct: 411 LESLVKCLCKKGEFQKAVQLVD----EIVTDGCIPSKGTWKLLIG 451
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-- 142
KD P YT +IN L +K D ++ +K S G NV M G
Sbjct: 221 KDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK-------SKGIEPNVFTYSSLMDGLC 273
Query: 143 ---RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
R +A+E M + C P++ T+ ++ L + E + G++ DA
Sbjct: 274 KDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAG 333
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN-------VRTYSTLMHGLCEKGNVEEA 252
++ G C A LDE PN V+T + ++ GLC A
Sbjct: 334 LYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRA 392
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
F L M S GI + T L+ L K+G+ ++ ++L++ + GC P+ +++ ++
Sbjct: 393 FTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGH 452
Query: 313 LLDKKRFPEAKELVGR 328
LDK EA + + R
Sbjct: 453 TLDKTIVGEASDTLLR 468
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 190/374 (50%), Gaps = 12/374 (3%)
Query: 12 RQSIIQSLSSASTITRKRTFALASPSASHQDSDHH--AYKLNHKDWLSPTEVLKIFSNLR 69
R+ + L + I +R + + P + + H +K K W L +
Sbjct: 2 RRRLSSVLINNHCIASQRHYHTSRPEKPTKKATSHEPTHKFTRKPW-EEVPFLTDLKEIE 60
Query: 70 DPISVISVLNQYSK---RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
DP +S+ +QY + R DY P+ Y+ +I KLA+++ FDA++ I++ ++ + R
Sbjct: 61 DPEEALSLFHQYQEMGFRHDY-PS---YSSLIYKLAKSRNFDAVDQILRLVRYRNV-RCR 115
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+ F +I+ YG AG + KA++ + S++C ++++ N ++N+LV + + +
Sbjct: 116 ESLFMALIQHYGK-AGWVDKAVDVFHKLTSFDCVRTIQSLNTLINVLVDNGELEKAKSFF 174
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
A + + ++ NIL+KG + + EAA V DE + +P+V TY++L+ LC
Sbjct: 175 DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRN 234
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
++ +A LLE M + I + VTF +L+ GL G+ E KL+ M+ +GC P +Y
Sbjct: 235 NDMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNY 294
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ L + + EAK L+G M R+ P FV Y L++ LC + V + L +M
Sbjct: 295 GVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQM 354
Query: 367 QGFVPRMGMWREIV 380
+G P +R IV
Sbjct: 355 KGCKPNAATYRMIV 368
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 114/234 (48%)
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A + +M PSV T+N ++ L G+ + K + +A +L+K
Sbjct: 205 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDMGKATSLLEDMIKKRIRPNAVTFGLLMK 264
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC NG A ++ + + C+P + Y LM L ++G ++EA LL M+ I
Sbjct: 265 GLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEMKKRRIKP 324
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D V +NIL++ L +G+V E + L M+ KGC PN+A+Y+ ++ G F ++
Sbjct: 325 DFVIYNILVNHLCTEGRVPEAYRTLTEMQMKGCKPNAATYRMIVDGFCRIGDFDSGLNVL 384
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ R SP+ ++ +++ GL ++ +VL+ M ++ W+ ++
Sbjct: 385 NAMLASRHSPTPATFVRMVSGLIKGGNLDHACFVLEVMGKKKLSFGYSAWQNLL 438
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 95/206 (46%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA L DM P+ TF L++ L Y E + + G + +
Sbjct: 237 MGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGV 296
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ L + G ++ A +L E K+ +P+ Y+ L++ LC +G V EA+ L M+ +G
Sbjct: 297 LMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMKG 356
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ T+ +++ G + G + G+ +L M P A++ ++ GL+ A
Sbjct: 357 CKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPATFVRMVSGLIKGGNLDHAC 416
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLC 349
++ M +++S + +++ L+ LC
Sbjct: 417 FVLEVMGKKKLSFGYSAWQNLLCDLC 442
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G ++A + +FDM C P + + ++++ L E + + K ++ D
Sbjct: 270 GEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIY 329
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ LC G + A+ L E + C+PN TY ++ G C G+ + +L M +
Sbjct: 330 NILVNHLCTEGRVPEAYRTLTEMQMKGCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLA 389
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
TF ++SGL K G ++ +LE M K +++Q +L L
Sbjct: 390 SRHSPTPATFVRMVSGLIKGGNLDHACFVLEVMGKKKLSFGYSAWQNLLCDL 441
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 82/218 (37%), Gaps = 44/218 (20%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN--------------- 248
L L E + E A + ++ + + +YS+L++ L + N
Sbjct: 52 FLTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN 111
Query: 249 --------------------VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
V++A + ++ S + N LI+ L G++E+
Sbjct: 112 VRCRESLFMALIQHYGKAGWVDKAVDVFHKLTSFDCVRTIQSLNTLINVLVDNGELEKAK 171
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ K PNS S+ ++ G LDK + A ++ M+ + PS V+Y LI L
Sbjct: 172 SFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFL 231
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
C + +L+ M+++ P VTFG
Sbjct: 232 CRNNDMGKATSLLEDMIKKRIRP---------NAVTFG 260
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 177/381 (46%), Gaps = 37/381 (9%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L P V + DP++ + + NQ + Y +I KL +F+A+ED++
Sbjct: 5 LQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLA 64
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
++ + +G + +++ YG G++ +A+ M Y+C PSV+++N ++N+LV
Sbjct: 65 EMRKNVDSKMLEGVYIGIMRDYGR-KGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVE 123
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE----- 230
+ + +Y +G+ D I +K C G AA +L+ P Q CE
Sbjct: 124 YGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS 183
Query: 231 ------------------------------PNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
P++ T++ L+H LC+KGNV+E+ L ++
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ + TFNI I GL ++G ++E +LLE + +G P+ SY ++ G +
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA+ + +M+ + P+ +Y +I+G C ++++ D +L+ + +GF+P + ++
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363
Query: 381 -GCVTFGKDNRNRVYVTETVD 400
G G NR E ++
Sbjct: 364 NGLCNDGDMNRAMAVFYEAME 384
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 2/295 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D P+ Y I+N L + F + R+K + + D + + + + GR +
Sbjct: 106 DCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK--DIGIYPDVYTHTIRMKSFCITGRPT 163
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A+ L +MP C + ++ V++ E ++ K G+ D N L+
Sbjct: 164 AALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLI 223
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC+ GN++ + + + K+ PN+ T++ + GLC KG ++EA LLE + SEG+
Sbjct: 224 HVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT 283
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D +++N LI G K K+ E L +M G PN +Y ++ G A ++
Sbjct: 284 PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI 343
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + P +Y LI+GLCN + V + +++GF + ++ +V
Sbjct: 344 LRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 135/303 (44%), Gaps = 15/303 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P+E Y+ +IN L + M R GF +++I +Y + +
Sbjct: 350 KGFIPDEFTYSSLINGLCN-------DGDMNRAMAVFYEAMEKGFKHSII-LYNTLVKGL 401
Query: 145 SK------AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
SK A++ + DM + C P + T+NLV+N L + GI A G D
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N L+ G C+ N++ A +LD P+V TY+TL++GLC+ ++ +
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M +G + +T+NILI K KV E M+L + MK +G P+ + ++ GL
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581
Query: 319 FPEAKELVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+A EL + E + S S + +I+ C + V + + KM P +R
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYR 641
Query: 378 EIV 380
++
Sbjct: 642 VMI 644
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 143/302 (47%), Gaps = 4/302 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + + I L + D +++ I E L D YN + ++ +A
Sbjct: 249 PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT--PDVISYNTLICGFCKHSKLVEAE 306
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M + P+ T+N ++N A + I A G D + L+ GL
Sbjct: 307 CYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGL 366
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +G++ A V E ++ + ++ Y+TL+ GL ++G V +A L++ M G D
Sbjct: 367 CNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDI 426
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N++++GL K G + + +L KGC P+ ++ ++ G ++ +A E++
Sbjct: 427 WTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
M+ ++P ++Y L++GLC + +++V K M+++G P + + ++ +F KD
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIE--SFCKD 544
Query: 389 NR 390
+
Sbjct: 545 RK 546
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 5/287 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR-ISK 146
+P+ Y L++N L + I+ + K C D F +N + I G R + K
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILND-AIAKGC-IPDIFTFNTL-IDGYCKQRNMDK 479
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
AIE L M S+ P V T+N +LN L A+ + + + + G + NIL++
Sbjct: 480 AIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIE 539
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE-GID 265
C++ + A + E + P++ T TL+ GLC G +++A+ L +E E
Sbjct: 540 SFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS 599
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
T FNI+I+ ++ V KL +M G C P++ +Y+ ++ A
Sbjct: 600 YSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTF 659
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+ I + + PSF + K+++ LC + + ++ MVQ G VP
Sbjct: 660 LLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 116/243 (47%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F YN I AG + A + L D P T++ ++N L + ++
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYE 381
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
A + G + N L+KGL + G + A ++ + + C P++ TY+ +++GLC+ G
Sbjct: 382 AMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGC 441
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ +A G+L ++G D TFN LI G KQ +++ +++L+ M G P+ +Y
Sbjct: 442 LSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+L GL ++ + M+ + +P+ ++Y LI C + V + + K+M +G
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561
Query: 369 FVP 371
P
Sbjct: 562 LTP 564
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 122/281 (43%), Gaps = 8/281 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++N L +A++ D + D + + +EK C + YN++ ++S+A+
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAM-LEKGCT-PNIITYNILIESFCKDRKVSEAM 551
Query: 149 ETLFDMPSYNCWPSVKTF-NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E +M + P + T L+ L + +L + T + NI++
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINA 611
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
CE N+ A + + +C P+ TY ++ C+ GN++ A L S+G+
Sbjct: 612 FCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T +++ L ++ E + ++ M G P +EV K+ A ++V
Sbjct: 672 FTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP-----EEVNSIFEADKKEVAAPKIVV 726
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ ++ ++ SY+ L G+ N+K+VE + K Q+
Sbjct: 727 EYLLKKSHITYYSYELLYDGIRNRKVVEARPLLYKVAYQKA 767
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 177/381 (46%), Gaps = 37/381 (9%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L P V + DP++ + + NQ + Y +I KL +F+A+ED++
Sbjct: 5 LQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLA 64
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
++ + +G + +++ YG G++ +A+ M Y+C PSV+++N ++N+LV
Sbjct: 65 EMRKNVDSKMLEGVYIGIMRDYGR-KGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVE 123
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE----- 230
+ + +Y +G+ D I +K C G AA +L+ P Q CE
Sbjct: 124 YGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS 183
Query: 231 ------------------------------PNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
P++ T++ L+H LC+KGNV+E+ L ++
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ + TFNI I GL ++G ++E +LLE + +G P+ SY ++ G +
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA+ + +M+ + P+ +Y +I+G C ++++ D +L+ + +GF+P + ++
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363
Query: 381 -GCVTFGKDNRNRVYVTETVD 400
G G NR E ++
Sbjct: 364 NGLCNDGDMNRAMAVFYEAME 384
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 2/295 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D P+ Y I+N L + F + R+K + + D + + + + GR +
Sbjct: 106 DCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK--DIGIYPDVYTHTIRMKSFCITGRPT 163
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A+ L +MP C + ++ V++ E ++ K G+ D N L+
Sbjct: 164 AALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLI 223
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC+ GN++ + + + K+ PN+ T++ + GLC KG ++EA LLE + SEG+
Sbjct: 224 HVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT 283
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D +++N LI G K K+ E L +M G PN +Y ++ G A ++
Sbjct: 284 PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI 343
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + P +Y LI+GLCN + V + +++GF + ++ +V
Sbjct: 344 LRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 135/303 (44%), Gaps = 15/303 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P+E Y+ +IN L + M R GF +++I +Y + +
Sbjct: 350 KGFIPDEFTYSSLINGLCN-------DGDMNRAMAVFYEAMEKGFKHSII-LYNTLVKGL 401
Query: 145 SK------AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
SK A++ + DM + C P + T+NLV+N L + GI A G D
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N L+ G C+ N++ A +LD P+V TY+TL++GLC+ ++ +
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M +G + +T+NILI K KV E M+L + MK +G P+ + ++ GL
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581
Query: 319 FPEAKELVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+A EL + E + S S + +I+ C + V + + KM P +R
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYR 641
Query: 378 EIV 380
++
Sbjct: 642 VMI 644
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 143/302 (47%), Gaps = 4/302 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + + I L + D +++ I E L D YN + ++ +A
Sbjct: 249 PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT--PDVISYNTLICGFCKHSKLVEAE 306
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M + P+ T+N ++N A + I A G D + L+ GL
Sbjct: 307 CYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGL 366
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +G++ A V E ++ + ++ Y+TL+ GL ++G V +A L++ M G D
Sbjct: 367 CNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDI 426
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N++++GL K G + + +L KGC P+ ++ ++ G ++ +A E++
Sbjct: 427 WTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
M+ ++P ++Y L++GLC + +++V K M+++G P + + ++ +F KD
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIE--SFCKD 544
Query: 389 NR 390
+
Sbjct: 545 RK 546
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 5/286 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR-ISK 146
+P+ Y L++N L + I+ + K C D F +N + I G R + K
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILND-AIAKGC-IPDIFTFNTL-IDGYCKQRNMDK 479
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
AIE L M S+ P V T+N +LN L A+ + + + + G + NIL++
Sbjct: 480 AIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIE 539
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE-GID 265
C++ + A + E + P++ T TL+ GLC G +++A+ L +E E
Sbjct: 540 SFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS 599
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
T FNI+I+ + V KL +M G C P++ +Y+ ++ A
Sbjct: 600 YSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTF 659
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ I + + PSF + K+++ LC + + ++ MVQ G VP
Sbjct: 660 LLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 116/243 (47%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F YN I AG + A + L D P T++ ++N L + ++
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYE 381
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
A + G + N L+KGL + G + A ++ + + C P++ TY+ +++GLC+ G
Sbjct: 382 AMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGC 441
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ +A G+L ++G D TFN LI G KQ +++ +++L+ M G P+ +Y
Sbjct: 442 LSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+L GL ++ + M+ + +P+ ++Y LI C + V + + K+M +G
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561
Query: 369 FVP 371
P
Sbjct: 562 LTP 564
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 115/266 (43%), Gaps = 8/266 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++N L +A++ D + D + + +EK C + YN++ ++S+A+
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAM-LEKGCT-PNIITYNILIESFCKDRKVSEAM 551
Query: 149 ETLFDMPSYNCWPSVKTF-NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E +M + P + T L+ L + +L + T + NI++
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINA 611
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C N+ A + + +C P+ TY ++ C+ GN++ A L S+G+
Sbjct: 612 FCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T +++ L ++ E + ++ M G P +EV K+ A ++V
Sbjct: 672 FTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP-----EEVNSIFEADKKEVAAPKIVV 726
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKL 353
+ ++ ++ SY+ L G+ N+KL
Sbjct: 727 EYLLKKSHITYYSYELLYDGIRNRKL 752
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 170/314 (54%), Gaps = 6/314 (1%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
++S + + + RDP + + N ++K +N N A Y+ II+KLA+AK+F A++ ++
Sbjct: 47 FISHETAVNLIKHERDPQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAVDALL 106
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM-PSYNCWPSVKTFNLVLNLL 173
+++ E C+F + F N++K + + + +E + P PS+K + LNLL
Sbjct: 107 RQMMYET-CKFHESLFLNLMKYFAK-SSEFERVVEMFNKIQPIVREKPSLKAISTCLNLL 164
Query: 174 VSAKLYGEIQGIYTSAAK-LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE-P 231
V +K ++G K ++ + C NI +K C++G+LE+AF V+ E K + P
Sbjct: 165 VESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISYP 224
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMES-EGIDADTVTFNILISGLRKQGKVEEGMKL 290
N+ TYSTLM GLCE G ++EA L E M S + I D +T+N+LI+G GKV+ K+
Sbjct: 225 NLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKI 284
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+E MK GC PN +Y ++ G + R EA + M + V Y LI+ C
Sbjct: 285 MEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCR 344
Query: 351 QKLVEDVDWVLKKM 364
+++ +L++M
Sbjct: 345 FGRIDEAMALLEEM 358
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 154/361 (42%), Gaps = 46/361 (12%)
Query: 50 LNHKDWLSP-TEVLKIFSNLR----DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQA 104
LN L P T + IF D S +V+ + K PN Y+ +++ L ++
Sbjct: 180 LNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCES 239
Query: 105 KRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSV 163
R +AIE + + +++ D YNV+ + G++ +A + + M S C P+V
Sbjct: 240 GRLKEAIELFEEMVSKDQI--LPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNV 297
Query: 164 KTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE 223
FN Y++ L+ G C+ G LE A +E
Sbjct: 298 --FN------------------YSA---------------LMSGFCKEGRLEEAMDAFEE 322
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283
+ + Y+ L++ C G ++EA LLE M+ AD VT N+L+ G +G+
Sbjct: 323 MKIFGLKQDTVGYTILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGR 382
Query: 284 VEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKK 343
EE + +L R+ +G Y N ASY+ VL L K +A EL+G + P + +
Sbjct: 383 TEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNE 442
Query: 344 LIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVDSLA 403
L+ GLC + +D L + + GF P W + V F R + E +D L
Sbjct: 443 LLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALL---VEFVCRERKLLLAFELLDELT 499
Query: 404 S 404
+
Sbjct: 500 A 500
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 15/271 (5%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I + + + P+ Y ++IN + + D + IM+ +K S+G NV
Sbjct: 246 IELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMK-------SNGCSPNVF 298
Query: 135 KIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
M+G R+ +A++ +M + + +++N E +
Sbjct: 299 NYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALLEEM 358
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ + D +N+LL+G C G E A +L+ + N +Y +++ LC+KG++
Sbjct: 359 KETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDL 418
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
++A LL S G T N L+ GL K G ++ + L + G P S+ +
Sbjct: 419 DKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALL 478
Query: 310 LYGLLDKKRFPEAKELVGRMI---CERMSPS 337
+ + +++ A EL+ + CE PS
Sbjct: 479 VEFVCRERKLLLAFELLDELTANECEDFVPS 509
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 191/374 (51%), Gaps = 12/374 (3%)
Query: 12 RQSIIQSLSSASTITRKRTFALASPSASHQDSDHH--AYKLNHKDWLSPTEVLKIFSNLR 69
R+ + L + I +R + + P + + H +K K W L +
Sbjct: 2 RRRLSSVLINNQCIASQRHYHTSRPEKPTKKASSHEPTHKFTRKPW-EEVPFLTDLKEIE 60
Query: 70 DPISVISVLNQYSK---RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
DP +S+ +QY + R DY P+ Y+ +I KLA+++ FDA++ I++ ++ + R
Sbjct: 61 DPEEALSLFHQYQEMGFRHDY-PS---YSSLIYKLAKSRNFDAVDQILRLVRYRNV-RCR 115
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+ F +I+ YG AG + KAI+ + S++C ++++ N ++N+LV + + +
Sbjct: 116 ESLFMGLIQHYGK-AGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFF 174
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
A + + ++ NIL+KG + + EAA V DE + +P+V TY++L+ LC
Sbjct: 175 DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRN 234
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
++ +A LLE M + I + VTF +L+ GL +G+ E KL+ M+ +GC P +Y
Sbjct: 235 DDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNY 294
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ L + R EAK L+G M R+ P V Y L++ LC + V + VL +M
Sbjct: 295 GILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQM 354
Query: 367 QGFVPRMGMWREIV 380
+G P +R ++
Sbjct: 355 KGCKPNAATYRMMI 368
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 9/194 (4%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G ++A + +FDM C P + + ++++ L E + + K ++ D
Sbjct: 270 GEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIY 329
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ LC + A+ VL E + C+PN TY ++ G C + + +L M +
Sbjct: 330 NILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLA 389
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
TF +++GL K G ++ +LE M K S ++Q +L L K
Sbjct: 390 SRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKD---- 445
Query: 322 AKELVGRMICERMS 335
G + CE +S
Sbjct: 446 -----GGVYCEALS 454
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA L DM P+ TF L++ L Y E + + G + I
Sbjct: 237 MGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGI 296
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ L + G ++ A +L E K+ +P+V Y+ L++ LC + V EA+ +L M+ +G
Sbjct: 297 LMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ T+ ++I G + + G+ +L M P A++ ++ GL+ A
Sbjct: 357 CKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHAC 416
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLC 349
++ M + +S +++ L+ LC
Sbjct: 417 FVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 83/218 (38%), Gaps = 44/218 (20%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK----------------- 246
L L E + E A + ++ + + +YS+L++ L +
Sbjct: 52 FLTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN 111
Query: 247 ------------------GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
G+V++A + ++ S + N LI+ L G++E+
Sbjct: 112 VRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAK 171
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ K PNS S+ ++ G LDK + A ++ M+ + PS V+Y LI L
Sbjct: 172 SFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFL 231
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
C + +L+ M+++ P VTFG
Sbjct: 232 CRNDDMGKAKSLLEDMIKKRIRP---------NAVTFG 260
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 174/358 (48%), Gaps = 34/358 (9%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
+ L +EVL N + + + + + YT +I +L + D I+ +
Sbjct: 36 NLLKESEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYL 95
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+Q +K+E + D F VI Y AG +A++T + + + C PSVK +N VL+ L
Sbjct: 96 LQLMKLEGISCNED-LFVIVINAY-RRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDAL 153
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+S + I GIY + + G+E++ N+LLK LC+N ++AA +L E + C P+
Sbjct: 154 LSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDA 213
Query: 234 RTYSTLMHGLCEKGNVEEA------------------------------FGLLERMESEG 263
+Y+T++ +C G VEEA F L M EG
Sbjct: 214 VSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEG 273
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
ID D +T++ +I+ L + G VE + +L +M +GC PN ++ ++ G R EA
Sbjct: 274 IDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEAL 333
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+L RMI E P+ V+Y LIHGLC+ K+VE V V +KM + G P + ++
Sbjct: 334 DLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVS-VSQKMERNGVFPNETTYSTLI 390
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 135/284 (47%), Gaps = 2/284 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y+ +IN L++ + ++ ++ + C + F +++K Y M GR+ +A
Sbjct: 275 DPDVITYSTVINTLSEMGNVEMALAVLAKMFLRG-CSPNVHTFTSLMKGYF-MGGRLCEA 332
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ M P+ +N +++ L S E + + GV + + L+ G
Sbjct: 333 LDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDG 392
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ G+L A + ++ C PNV Y+ ++ LC A L+E M + +
Sbjct: 393 FAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPN 452
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+TFN I GL GK E MK+L +M+ GC PN +Y EVL GL + KR EA ++VG
Sbjct: 453 TITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVG 512
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + + V+Y ++ G C+ + + + K++ G P
Sbjct: 513 EIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKP 556
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 132/293 (45%), Gaps = 3/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I+ L + +E + K+E+ F + Y+ + AG + A
Sbjct: 346 PNTVAYNTLIHGLCSYGKM--VEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGAS 403
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M + C P+V + ++++L ++ + + A + N +KGL
Sbjct: 404 EIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGL 463
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +G E A VL++ + C PNV TY+ ++ GL EA ++ +E I ++
Sbjct: 464 CCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNL 523
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N ++SG G + +++ ++ G P+S +Y V+Y + A +LV R
Sbjct: 524 VTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDR 583
Query: 329 MICERMS-PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P +Y L+ G+CN V++ L KM+ +G P W +V
Sbjct: 584 LTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALV 636
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 140/316 (44%), Gaps = 13/316 (4%)
Query: 62 LKIFSNLRDPI------SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+KI++++ D + +I+ + KR N Y +++ L + R DA ++
Sbjct: 143 VKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLA 202
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
+ K C D Y + G++ +A E + S+ V +N ++N
Sbjct: 203 EMSY-KGC-IPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF-----VPVYNALINGFCR 255
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
E+ ++ A G++ D + ++ L E GN+E A VL + + C PNV T
Sbjct: 256 EHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHT 315
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
+++LM G G + EA L RM EG + +TV +N LI GL GK+ E + + ++M+
Sbjct: 316 FTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKME 375
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
G +PN +Y ++ G A E+ +MI P+ V Y ++ LC +
Sbjct: 376 RNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFN 435
Query: 356 DVDWVLKKMVQQGFVP 371
+++ M P
Sbjct: 436 HALHLIENMANGNCPP 451
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 132/284 (46%), Gaps = 16/284 (5%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+ +SV +Q +R PNE Y+ +I+ A+A +I ++ ++G
Sbjct: 365 VEAVSV-SQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKM-------ITNGCLP 416
Query: 132 NVIKIYGNMAGRISK------AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
NV+ +Y M + + A+ + +M + NC P+ TFN + L + +
Sbjct: 417 NVV-VYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKV 475
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ G + N +L GL A ++ E + + N+ TY+T++ G C
Sbjct: 476 LNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCH 535
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG-CYPNSA 304
G + A + ++ G D++T+N +I KQG+V+ ++L++R+ KG YP+
Sbjct: 536 AGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVF 595
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+Y +L+G+ + EA + +MI E + P+ ++ L+ GL
Sbjct: 596 TYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 169/317 (53%), Gaps = 8/317 (2%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
++S + + +DP + + N ++K +N N A Y+ +I+KLAQ K+F A++ ++
Sbjct: 56 FISHESAINLIKREKDPQHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALL 115
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM-PSYNCWPSVKTFNLVLNLL 173
++ E C+F + F N++K + + + +E + + P PS+K + LN+L
Sbjct: 116 HQMTYET-CKFHENIFLNLMKHFYK-SSLHERVLEMFYAIQPIVREKPSLKAISTCLNIL 173
Query: 174 VSAKLYGEIQG--IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK-QNCE 230
V +K Q +Y + L V + C NIL+K C++G+LE+A V+ E K +
Sbjct: 174 VESKQIDLAQKCLLYVN-EHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSY 232
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMES-EGIDADTVTFNILISGLRKQGKVEEGMK 289
PNV TYSTL+ GLC G ++EA L E M S + I D +T+++LI G GK + K
Sbjct: 233 PNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARK 292
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
++E M+ GC PN +Y ++ G + R EAKE+ M + P V Y LI+ C
Sbjct: 293 IMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFC 352
Query: 350 NQKLVEDVDWVLKKMVQ 366
+++ +LK+M +
Sbjct: 353 GVGRIDEAMELLKEMTE 369
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 163/352 (46%), Gaps = 41/352 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +N L ++K+ D + + + E L + +N++ + +G + A+
Sbjct: 161 PSLKAISTCLNILVESKQIDLAQKCLLYVN-EHLKVRPNTCIFNILVKHHCKSGDLESAL 219
Query: 149 ETLFDMP-SYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E + +M S +P+V T++ +++ L + +L I+ +K + DA ++L+K
Sbjct: 220 EVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIK 279
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C G + A +++ C+PNV YS LM+G C++G +EEA + + M+S G+
Sbjct: 280 GFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKP 339
Query: 267 DTV-----------------------------------TFNILISGLRKQGKVEEGMKLL 291
DTV TFN+L+ GL ++G+ +E +++L
Sbjct: 340 DTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRML 399
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E + +G Y N SY+ VL L K ++ L+G M+ P + + +L+ LC
Sbjct: 400 ENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEA 459
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVDSLA 403
+V++ L + Q GF P W ++ + R ++V E VD L
Sbjct: 460 GMVDNAVTALFGLTQMGFTPEPKSWAHLIEYIC---RERKLLFVFELVDELV 508
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 113/270 (41%), Gaps = 13/270 (4%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG----- 128
I + + + P+ Y+++I + D IM+ ++ S+G
Sbjct: 254 AIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMR-------SNGCDPNV 306
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F Y+V+ GR+ +A E +M S P + ++N E +
Sbjct: 307 FNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKE 366
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
++ + DA N+LLKGLC G + A +L+ + N +Y +++ LC+KG
Sbjct: 367 MTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGE 426
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+E++ LL M S G T N L+ L + G V+ + L + G P S+
Sbjct: 427 LEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAH 486
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSF 338
++ + +++ ELV ++ E+ S F
Sbjct: 487 LIEYICRERKLLFVFELVDELV-EKESGKF 515
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 180/349 (51%), Gaps = 4/349 (1%)
Query: 41 QDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINK 100
+ SD H SP+ V K+ ++ DP+ + + S++ ++ + + Y ++I K
Sbjct: 50 EPSDSHPNANTKSPIGSPSRVQKLIASQSDPLLAKEIFDYASRQPNFQHSYSSYLILILK 109
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCW 160
L +AK F I+D++ +K K + F +I IYG A KA++ + + ++C
Sbjct: 110 LGRAKYFSFIDDLLTDLK-SKNYPVTPTLFSYIINIYGE-ANLPDKALKIFYTILKFDCN 167
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQ-GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
PS K N +L +LVS + Y + ++ A V + NIL++ C NG + A+
Sbjct: 168 PSPKHLNGILEILVSHQNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYS 227
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ ++ K++ P+V +Y LM LC K V A LLE M ++G D +++ L++ L
Sbjct: 228 LFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLC 287
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
++ K+ E KLL RMK KGC P+ Y V+ G + R +A +++ M P+ V
Sbjct: 288 RKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLV 347
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
SY+ L+ GLC+Q + ++ L++M+ +GF P + ++ G GK
Sbjct: 348 SYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGK 396
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 2/184 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K Y P+ YT ++N L + K+ ++ R+KV K C D YN + + GR
Sbjct: 270 KGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKV-KGCN-PDIIHYNTVILGFCREGRA 327
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + L DM S C P++ ++ ++ L ++ E + G N L
Sbjct: 328 MDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNAL 387
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+KG C G +E A V++E K P+ T+ ++ +CE +++ +L++++ +
Sbjct: 388 IKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMVSRICEVDDLQRIGEILDKVKKVEL 447
Query: 265 DADT 268
DT
Sbjct: 448 KGDT 451
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 163/328 (49%), Gaps = 5/328 (1%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKR--KDYNPNEALYTLIINKLAQAKRFDAIEDI 113
+ +V ++ RD I + + + + + ++L+I++L A F E++
Sbjct: 13 IGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEEL 72
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ R+K EK C ++ F ++ + YG + + A+ M Y C PS K++ V +L
Sbjct: 73 LCRMKEEK-CNITEDIFLSICRAYGRVHKPLD-AVRVFRKMKEYECEPSQKSYITVFAIL 130
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN-GNLEAAFYVLDEFPKQNCEPN 232
V Y ++G+ LN+L+K LC+N G ++AA + E P + C P+
Sbjct: 131 VGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPD 190
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TY TL++GLC G + EA L + ME++ VT+ LI GL + ++ ++LLE
Sbjct: 191 SYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLE 250
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M KG PN +Y ++ G A EL+ M+ R P+ ++Y L+HGLC +
Sbjct: 251 EMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEG 310
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+++ +L +M QG P G++ +I+
Sbjct: 311 KLQEAVEILDRMKLQGLRPDAGLYGKII 338
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 20/254 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +P YT +I+ L Q+K D+ +++ + S G NV M G
Sbjct: 220 KACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMA-------SKGIKPNVFTYSSLMDGHC 272
Query: 145 -----SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
S+A+E L M S P++ T++ +++ L E I G+ DA
Sbjct: 273 KSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAG 332
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN-------VRTYSTLMHGLCEKGNVEEA 252
++ G C+ A LDE PN VR ++ ++ GLC + + A
Sbjct: 333 LYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTE-HPNRA 391
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
F L M + GI D TF+ L++ +G + + L++ M GC P+ ++ V+
Sbjct: 392 FQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCA 451
Query: 313 LLDKKRFPEAKELV 326
D+++ E+ ELV
Sbjct: 452 FWDRRKVRESAELV 465
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 10/176 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y+ +++ L + + +I+ R+K++ L R G + +I + ++ + +A
Sbjct: 294 PNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGL-RPDAGLYGKIISGFCDIC-KFHEAA 351
Query: 149 ETLFDM------PSYNCWP-SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
L +M P+ W V+ N+V+ L + Q +Y S G+ IDA
Sbjct: 352 NFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQ-LYLSMRTRGISIDAKTF 410
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+ L+ C G+L A +++DE C P+ T++ ++ ++ V E+ L++
Sbjct: 411 DSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQ 466
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 174/355 (49%), Gaps = 32/355 (9%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L +VLK + D + + K + Y ++I KLA + D ++ ++Q
Sbjct: 41 LKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQ 100
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
++K+E + S+ F +VI Y AG +A++T + M + P+VK +N +L+ L+
Sbjct: 101 QMKLEGI-SCSEDLFISVIGSY-RRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLD 158
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ I IY++ K G+E + NILLK LC+N ++ A +L E + C+P+ +
Sbjct: 159 ENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVS 218
Query: 236 YSTLMHGLCEKGNV------------------------------EEAFGLLERMESEGID 265
Y+TL+ LC+ G V EEAF LL+ M ++GID
Sbjct: 219 YTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID 278
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ +++ +I+ L G VE + +L +M +GC PN ++ ++ G K EA +
Sbjct: 279 PNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDF 338
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
RMI E + P+ V+Y L+HGLC+++ + D V +M G P + + ++
Sbjct: 339 WDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALI 393
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 147/292 (50%), Gaps = 12/292 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +PN YT IIN L+ A + ++ ++ + C + F ++IK + + G
Sbjct: 275 KGIDPNVISYTTIINALSDAGNVELSLAVLAKM-FARGCSPNLHTFTSLIKGFF-LKGGS 332
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI- 203
+A++ M P+V +N +++ L S + G+ ++ +EI+ CC N+
Sbjct: 333 HEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ-----MEINGCCPNVR 387
Query: 204 ----LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
L+ G + G+L+ A V + C PNV Y+ ++ LC +A+ L+E M
Sbjct: 388 TYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ E +TVTFN I GL G+V+ +K+ ++M GC+PN+ +Y E+L LL +RF
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRF 507
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA LV M + + V+Y +I+G C ++ + +L KMV +G P
Sbjct: 508 GEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKP 559
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 139/297 (46%), Gaps = 2/297 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ PN Y +++ L + + ++++ C + + +I Y AG
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCP-NVRTYSALIDGYAK-AGD 401
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A E M ++ C P+V + ++++L ++ + + + + N
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+KGLC +G ++ A V D+ C PN TY+ L+ L + EAFGL++ ME G
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I+ + VT+N +I G G + E ++LL +M +G P++ + V+ + + A
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAI 581
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+L+ R+ + P ++Y LI G+C VE+ L++M+ +G P + W +V
Sbjct: 582 QLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 139/314 (44%), Gaps = 9/314 (2%)
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDY--NPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
+ + + R S L + + +D+ P +Y I++ L RF I I +K
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
+ + + F YN++ R+ A + L +M S C P ++ +++ L
Sbjct: 175 DGM--EPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCK---L 229
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
G+++ A + N L+ G+C+ E AF +LDE + +PNV +Y+T+
Sbjct: 230 GKVKEARELAMSFTPSVPV--YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
++ L + GNVE + +L +M + G + TF LI G +G E + +RM +G
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
PN +Y +++GL K+ +A + +M P+ +Y LI G ++
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASE 407
Query: 360 VLKKMVQQGFVPRM 373
V M+ G P +
Sbjct: 408 VWNWMITHGCHPNV 421
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 140/322 (43%), Gaps = 15/322 (4%)
Query: 56 LSPTEVLKIFSNLRDPI------SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDA 109
+ PT +KI++++ D + +I+ + K+ PN Y +++ L + R D
Sbjct: 142 VKPT--VKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDG 199
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLV 169
++ + K C + + +I + G++ +A E PSV +N +
Sbjct: 200 AHKLLVEMS-SKGCDPDEVSYTTLISSLCKL-GKVKEARELAMSFT-----PSVPVYNAL 252
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
+N + + E + G++ + ++ L + GN+E + VL + + C
Sbjct: 253 INGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGC 312
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
PN+ T+++L+ G KG EA +RM EG+ + V +N L+ GL + + + +
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVS 372
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+ +M+ GC PN +Y ++ G A E+ MI P+ V+Y ++ LC
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC 432
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
+ +++ M + P
Sbjct: 433 RNSMFNQAYCLIENMQVENCPP 454
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 39/262 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK-IYGNMAGRISK 146
+PN YT +++ L + F+ +++ ++VE C + F IK + G +GR+
Sbjct: 418 HPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN-CPPNTVTFNTFIKGLCG--SGRVDW 474
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
AI+ M + C+P+ T+N +L+ L+ + +GE G+ G+E+
Sbjct: 475 AIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIEL---------- 524
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
N+ TY+T+++G C G + EA LL +M G
Sbjct: 525 -------------------------NLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKP 559
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D +T NI+I KQGKV ++L++R+ +P+ +Y ++ G+ EA +
Sbjct: 560 DAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYL 619
Query: 327 GRMICERMSPSFVSYKKLIHGL 348
RM+ E +SP+ ++ L+ L
Sbjct: 620 RRMLSEGISPNVATWNVLVRHL 641
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
FY + +F +P V+ Y+ ++ L ++ + + M+ +G++ + T+NIL+
Sbjct: 133 TFYRMQDF---RVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
L K +V+ KLL M KGC P+ SY ++ L + EA+EL +P
Sbjct: 190 ALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELA-----MSFTP 244
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
S Y LI+G+C + E+ +L +M+ +G P + + I+ ++
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 174/355 (49%), Gaps = 32/355 (9%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L +VLK + D + + K + Y ++I KLA + D ++ ++Q
Sbjct: 41 LKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQ 100
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
++K+E + S+ F +VI Y AG +A++T + M + P+VK +N +L+ L+
Sbjct: 101 QMKLEGI-SCSEDLFISVIGSY-RRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLD 158
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ I IY++ K G+E + NILLK LC+N ++ A +L E + C+P+ +
Sbjct: 159 ENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVS 218
Query: 236 YSTLMHGLCEKGNV------------------------------EEAFGLLERMESEGID 265
Y+TL+ LC+ G V EEAF LL+ M ++GID
Sbjct: 219 YTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID 278
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ +++ +I+ L G VE + +L +M +GC PN ++ ++ G K EA +
Sbjct: 279 PNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDF 338
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
RMI E + P+ V+Y L+HGLC+++ + D V +M G P + + ++
Sbjct: 339 WDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALI 393
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 147/292 (50%), Gaps = 12/292 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +PN YT IIN L+ A + ++ ++ + C + F ++IK + + G
Sbjct: 275 KGIDPNVISYTTIINALSDAGNVELSLAVLAKM-FARGCSPNLHTFTSLIKGFF-LKGGS 332
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI- 203
+A++ M P+V +N +++ L S + G+ ++ +EI+ CC N+
Sbjct: 333 HEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ-----MEINGCCPNVR 387
Query: 204 ----LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
L+ G + G+L+ A V + C PNV Y+ ++ LC +A+ L+E M
Sbjct: 388 TYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ E +TVTFN I GL G+V+ +K+ ++M GC+PN+ +Y E+L LL +RF
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRF 507
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA LV M + + V+Y +I+G C ++ + +L KMV +G P
Sbjct: 508 GEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKP 559
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 139/297 (46%), Gaps = 2/297 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ PN Y +++ L + + ++++ C + + +I Y AG
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCP-NVRTYSALIDGYAK-AGD 401
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A E M ++ C P+V + ++++L ++ + + + + N
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+KGLC +G ++ A V D+ C PN TY+ L+ L + EAFGL++ ME G
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I+ + VT+N +I G G + E ++LL +M +G P++ + V+ + + A
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAI 581
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+L+ R+ + P ++Y LI G+C VE+ L++M+ +G P + W +V
Sbjct: 582 QLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 139/314 (44%), Gaps = 9/314 (2%)
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDY--NPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
+ + + R S L + + +D+ P +Y I++ L RF I I +K
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
+ + + F YN++ R+ A + L +M S C P ++ +++ L
Sbjct: 175 DGM--EPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCK---L 229
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
G+++ A + N L+ G+C+ E AF +LDE + +PNV +Y+T+
Sbjct: 230 GKVKEARELAMSFTPSVPV--YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
++ L + GNVE + +L +M + G + TF LI G +G E + +RM +G
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
PN +Y +++GL K+ +A + +M P+ +Y LI G ++
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASE 407
Query: 360 VLKKMVQQGFVPRM 373
V M+ G P +
Sbjct: 408 VWNWMITHGCHPNV 421
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 140/322 (43%), Gaps = 15/322 (4%)
Query: 56 LSPTEVLKIFSNLRDPI------SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDA 109
+ PT +KI++++ D + +I+ + K+ PN Y +++ L + R D
Sbjct: 142 VKPT--VKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDG 199
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLV 169
++ + K C + + +I + G++ +A E PSV +N +
Sbjct: 200 AHKLLVEMS-SKGCDPDEVSYTTLISSLCKL-GKVKEARELAMSFT-----PSVPVYNAL 252
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
+N + + E + G++ + ++ L + GN+E + VL + + C
Sbjct: 253 INGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGC 312
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
PN+ T+++L+ G KG EA +RM EG+ + V +N L+ GL + + + +
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVS 372
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+ +M+ GC PN +Y ++ G A E+ MI P+ V+Y ++ LC
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC 432
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
+ +++ M + P
Sbjct: 433 RNSMFNQAYCLIENMQVENCPP 454
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 39/286 (13%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK-IYGNMAGRISK 146
+PN YT +++ L + F+ +++ ++VE C + F IK + G +GR+
Sbjct: 418 HPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN-CPPNTVTFNTFIKGLCG--SGRVDW 474
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
AI+ M + C+P+ T+N +L+ L+ + +GE G+ G+E+
Sbjct: 475 AIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIEL---------- 524
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
N+ TY+T+++G C G + EA LL +M G
Sbjct: 525 -------------------------NLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKP 559
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D +T NI+I KQGKV ++L++R+ +P+ +Y ++ G+ EA +
Sbjct: 560 DAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYL 619
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
RM+ E +SP+ ++ L+ L + L ++ GF R
Sbjct: 620 RRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFETR 665
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
FY + +F +P V+ Y+ ++ L ++ + + M+ +G++ + T+NIL+
Sbjct: 133 TFYRMQDF---RVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
L K +V+ KLL M KGC P+ SY ++ L + EA+EL +P
Sbjct: 190 ALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELA-----MSFTP 244
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
S Y LI+G+C + E+ +L +M+ +G P + + I+ ++
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 154/295 (52%), Gaps = 3/295 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ + + LII++L +F E +++R+K EK C ++ F ++ + YG + R
Sbjct: 46 FRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEK-CMVTEDIFLSICRGYGRVH-RPLD 103
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
AI M + P+ K + +L++LV G Y +LG+ LNIL+K
Sbjct: 104 AIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIK 163
Query: 207 GLCENG-NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC+N +++A + E P + C+P+ TY TL++GLC GN+ EA L + ME +G
Sbjct: 164 ALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFS 223
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
A VT+ LI GL + ++E + LLE MK PN +Y ++ GL +A +L
Sbjct: 224 ASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQL 283
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ M + P+ V+Y LI+GLC ++ + + +L +M QG P G++ +I+
Sbjct: 284 LEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKII 338
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 114/214 (53%), Gaps = 7/214 (3%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ +MP+ C P T+ ++N L E + ++ + G
Sbjct: 172 VDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTS 231
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC++ NL+ A +L+E + + EPNV TYS+LM GLC+ G+ +A LLE M+ +
Sbjct: 232 LIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKH 291
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT++ LI+GL K+ K+ E +++L+RM+ +G PN+ Y +++ GL + EA
Sbjct: 292 HLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAA 351
Query: 324 ELVGRMICERMSPSFVSYK-------KLIHGLCN 350
+ M+ +SP+ S+ ++ GLCN
Sbjct: 352 NFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCN 385
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 1/238 (0%)
Query: 164 KTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE 223
+TF L+++ LV+ + +G+ + + + +G A V +
Sbjct: 51 ETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHK 110
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL-RKQG 282
P + Y T++ L E+ +V+ A G M GI + V+ NILI L + +
Sbjct: 111 MEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKE 170
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
V+ +++ + M +GC P+S +Y ++ GL EAKEL M + S S V+Y
Sbjct: 171 TVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYT 230
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVD 400
LIHGLC +++ +L++M + P + + ++ + G + + + E +D
Sbjct: 231 SLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMD 288
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 115/249 (46%), Gaps = 9/249 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
++K ++ + YT +I+ L Q+ D +++ +K + + F Y+ + G
Sbjct: 218 EQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDI--EPNVFTYSSLMDGLCKGG 275
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
S+A++ L M + P++ T++ ++N L + E I G++ +A
Sbjct: 276 HSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYG 335
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPN-------VRTYSTLMHGLCEKGNVEEAFGL 255
++ GLC G+ + A +DE PN VR ++ ++ GLC + AF L
Sbjct: 336 KIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQL 395
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
M + I + TF+ L+ K+G + + ++LE M GC P+ + V+ GL D
Sbjct: 396 YLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWD 455
Query: 316 KKRFPEAKE 324
+K+ EA E
Sbjct: 456 RKKVREATE 464
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 89/208 (42%), Gaps = 30/208 (14%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + PN Y+ +IN L + ++ +I+ R++++ L AG
Sbjct: 289 KKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGL---------------KPNAGL 333
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
K I L SY + N + +++ GI + A + + N+
Sbjct: 334 YGKIISGLCAAGSYQ-----EAANFIDEMVLG--------GISPNRASWSLHVRM--HNM 378
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++GLC N + AF + + + T+ L+ C++G++ +A +LE M +G
Sbjct: 379 VVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDG 438
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLL 291
D +N++I GL + KV E + L
Sbjct: 439 CIPDEGVWNVVIGGLWDRKKVREATEQL 466
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 162/328 (49%), Gaps = 5/328 (1%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKR--KDYNPNEALYTLIINKLAQAKRFDAIEDI 113
+ +V ++ RD I + + + + + ++L+I++L A F E++
Sbjct: 13 IGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEEL 72
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ R+K EK C ++ F ++ + YG + + A+ M Y C PS K++ V +L
Sbjct: 73 LCRMKEEK-CNITEDIFLSICRAYGRVHKPLD-AVRVFRKMKEYECEPSQKSYITVFAIL 130
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN-GNLEAAFYVLDEFPKQNCEPN 232
V Y ++G+ LN+L+K LC+N G ++AA + E P + C P+
Sbjct: 131 VGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPH 190
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TY TL+ GLC G + EA L + ME++ VT+ LI GL + ++ ++LLE
Sbjct: 191 SYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLE 250
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M KG PN +Y ++ G A EL+ M+ R P+ ++Y L+HGLC +
Sbjct: 251 EMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEG 310
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+++ +L +M QG P G++ +I+
Sbjct: 311 KLQEAVEILDRMKLQGLRPDAGLYGKII 338
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 119/246 (48%), Gaps = 8/246 (3%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTF-NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G+I +A E +M + C P+V T+ +L+ L S L I+ + A+K G++ +
Sbjct: 205 GKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASK-GIKPNVFT 263
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L+ G C++G A +LD + PN+ TYSTL+HGLC++G ++EA +L+RM+
Sbjct: 264 YSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMK 323
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY------QEVLYGLL 314
+G+ D + +ISG K E L+ M G PN ++ ++ L
Sbjct: 324 LQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGL 383
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ A +L M +S ++ L++ CN+ + ++ +MV G +P
Sbjct: 384 CTEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEX 443
Query: 375 MWREIV 380
W +V
Sbjct: 444 TWNAVV 449
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 20/254 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +P Y +I+ L Q+K D+ +++ + S G NV M G
Sbjct: 220 KACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMA-------SKGIKPNVFTYSSLMDGHC 272
Query: 145 -----SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
S+A+E L M S P++ T++ +++ L E I G+ DA
Sbjct: 273 KSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAG 332
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN-------VRTYSTLMHGLCEKGNVEEA 252
++ G C+ A LDE PN VR ++ ++ GLC + + A
Sbjct: 333 LYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTE-HPNRA 391
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
F L M + GI D TF+ L++ +G + + L++ M GC P+ ++ V+
Sbjct: 392 FQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCA 451
Query: 313 LLDKKRFPEAKELV 326
D+++ E+ ELV
Sbjct: 452 FWDRRKVRESAELV 465
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 10/176 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y+ +++ L + + +I+ R+K++ L R G + +I + ++ + +A
Sbjct: 294 PNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGL-RPDAGLYGKIISGFCDIC-KFHEAA 351
Query: 149 ETLFDM------PSYNCWP-SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
L +M P+ W V+ N+V+ L + Q +Y S G+ IDA
Sbjct: 352 NFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQ-LYLSMRTRGISIDAKTF 410
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+ L+ C G+L A +++DE C P+ T++ ++ ++ V E+ L++
Sbjct: 411 DSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAELVQ 466
>gi|238480176|ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01400, mitochondrial; Flags: Precursor
gi|332656621|gb|AEE82021.1| uncharacterized protein [Arabidopsis thaliana]
Length = 466
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 181/333 (54%), Gaps = 4/333 (1%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
SPT V K+ ++ DP+ + + S++ ++ + + + ++I KL + + F+ I+D++ +
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAK 109
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+ + F Y +IK+Y A K + T + M +N P K N +L++LVS
Sbjct: 110 HRSSGYPLTGEIFTY-LIKVYAE-AKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSH 167
Query: 177 KLYGEIQ-GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ Y + ++ S+ GV + N+L++ C N +L A+ + + +++ P+V +
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y L+ G C KG V A LL+ M ++G D +++ L++ L ++ ++ E KLL RMK
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
KGC P+ Y ++ G + R +A++++ M+ SP+ VSY+ LI GLC+Q + +
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
+ L++M+ +GF P + +V G +FGK
Sbjct: 348 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 380
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 2/191 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P+ YT ++N L + + ++ R+K+ K C D YN + + R
Sbjct: 254 KGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL-KGCN-PDLVHYNTMILGFCREDRA 311
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + L DM S C P+ ++ ++ L ++ E + G N L
Sbjct: 312 MDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCL 371
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+KG C G +E A V++ K + T+ ++ +C + E+ LE E I
Sbjct: 372 VKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEI 431
Query: 265 DADTVTFNILI 275
DT ++ I
Sbjct: 432 TGDTRIVDVGI 442
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 61/169 (36%), Gaps = 35/169 (20%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+++ A+E L DM + P ++ +LN L E + G D
Sbjct: 239 GQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHY 298
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG-------------- 247
N ++ G C A VLD+ C PN +Y TL+ GLC++G
Sbjct: 299 NTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMIS 358
Query: 248 ---------------------NVEEAFGLLERMESEGIDADTVTFNILI 275
VEEA ++E + G + T+ ++I
Sbjct: 359 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 407
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 171/319 (53%), Gaps = 10/319 (3%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+S + + +DP +++ N S++ + N A Y I++KLA+ F A++ ++
Sbjct: 91 ISHDSAIDLIKREKDPQHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVLH 150
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM-PSYNCWPSVKTFNLVLNLLV 174
++ E C+F +G F N++K + + K + F + P PS K + LNLL+
Sbjct: 151 QMTYET-CKFHEGIFVNLMKHFSKSSLH-EKLLHAYFSIQPIVREKPSPKALSTCLNLLL 208
Query: 175 SAKLYGEIQGIYTSAAK-LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE--- 230
+ + + A + L + + C NIL+K C+NG+L++AF +++E +N E
Sbjct: 209 DSNRVDLARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEM--RNSEFSY 266
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMES-EGIDADTVTFNILISGLRKQGKVEEGMK 289
PN+ TYSTLM GLC G V+EAF L E M S + I D +T+N+LI+G + GK +
Sbjct: 267 PNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARN 326
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+++ MK GCYPN +Y ++ GL + +AK ++ + + P V+Y LI+ LC
Sbjct: 327 VIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLC 386
Query: 350 NQKLVEDVDWVLKKMVQQG 368
++ +L++M + G
Sbjct: 387 RNGKSDEAIELLEEMKENG 405
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 47/319 (14%)
Query: 89 PNEALYTLIINKLAQAKR----FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
PN Y+ +++ L + R FD E+++ R + D YNV+ G+
Sbjct: 267 PNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHI-----VPDPLTYNVLINGFCRGGKP 321
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A + M S C+P+V ++ L
Sbjct: 322 DRARNVIQFMKSNGCYPNVYNYS-----------------------------------AL 346
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+ G LE A VL E +P+ TY++L++ LC G +EA LLE M+ G
Sbjct: 347 VDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGC 406
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
AD+VTFN+L+ GL ++GK EE + ++E++ +G Y N SY+ VL L K AKE
Sbjct: 407 QADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKE 466
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
L+G M+ P + + +L+ LC +V+D L +V+ GF P + W ++G +
Sbjct: 467 LLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETWEVLIGLIC 526
Query: 385 FGKDNRNRVYVTETVDSLA 403
R +YV E +D L
Sbjct: 527 ---RERKLLYVFELLDELV 542
>gi|3193306|gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
salt-inducible-like protein (GB:AL021637) [Arabidopsis
thaliana]
Length = 991
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 190/354 (53%), Gaps = 8/354 (2%)
Query: 40 HQDSDHHAYK---LNHKDWL-SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYT 95
+ S+H A K N K + SPT V K+ ++ DP+ + + S++ ++ + + +
Sbjct: 29 YSSSEHEARKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHL 88
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
++I KL + + F+ I+D++ + + + F Y +IK+Y A K + T + M
Sbjct: 89 ILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTY-LIKVYAE-AKLPEKVLSTFYKML 146
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQ-GIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
+N P K N +L++LVS + Y + ++ S+ GV + N+L++ C N +L
Sbjct: 147 EFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDL 206
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
A+ + + +++ P+V +Y L+ G C KG V A LL+ M ++G D +++ L
Sbjct: 207 SIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTL 266
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
++ L ++ ++ E KLL RMK KGC P+ Y ++ G + R +A++++ M+
Sbjct: 267 LNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGC 326
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
SP+ VSY+ LI GLC+Q + ++ L++M+ +GF P + +V G +FGK
Sbjct: 327 SPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 380
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 5/205 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P+ YT ++N L + + ++ R+K+ K C D YN + + R
Sbjct: 254 KGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL-KGCN-PDLVHYNTMILGFCREDRA 311
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + L DM S C P+ ++ ++ L ++ E + G N L
Sbjct: 312 MDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCL 371
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+KG C G +E A V++ K + T+ ++ +C + E+ LE E I
Sbjct: 372 VKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEI 431
Query: 265 DADTVTFNILI---SGLRKQGKVEE 286
DT ++ I S L K K+ E
Sbjct: 432 TGDTRIVDVGIGLGSYLSKNKKMPE 456
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 61/169 (36%), Gaps = 35/169 (20%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+++ A+E L DM + P ++ +LN L E + G D
Sbjct: 239 GQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHY 298
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG-------------- 247
N ++ G C A VLD+ C PN +Y TL+ GLC++G
Sbjct: 299 NTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMIS 358
Query: 248 ---------------------NVEEAFGLLERMESEGIDADTVTFNILI 275
VEEA ++E + G + T+ ++I
Sbjct: 359 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 407
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 157/285 (55%), Gaps = 7/285 (2%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
+ Y+LI N A + F+++E ++ R+++E FS+ F+ + K YG A +KAIE
Sbjct: 72 DSTFYSLIEN-YAYSSDFNSLEKVLNRMRLENRV-FSEKSFFVMFKAYGK-AHLPNKAIE 128
Query: 150 TLFDMP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY---TSAAKLGVEIDACCLNILL 205
+ M + C P+VK+FN VLN+++ A + Y A + + + N+++
Sbjct: 129 LFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLII 188
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
K +C+ G ++ A + E P + C P+ TY TLM GLC+ ++EA LL+ M+ EG
Sbjct: 189 KSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCF 248
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
TFN+LI+GL K+G KL++ M KGC PN +Y +++GL K + +A L
Sbjct: 249 PSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSL 308
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ RM+ + P+ V+Y +I+GL Q D VL M ++G++
Sbjct: 309 LDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYI 353
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 145/310 (46%), Gaps = 13/310 (4%)
Query: 48 YKLNHKDWLSPTEVLKIFSNLRDPI-------SVISVLNQYSKRKDYN--PNEALYTLII 98
Y+++ + + PT +K F+++ + I + N KD N PN + LII
Sbjct: 131 YRMSFEFYCKPT--VKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLII 188
Query: 99 NKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYN 158
+ + D ++ + + V K D + Y + RI +A+ L +M
Sbjct: 189 KSMCKLGLVDNAIELFREMPVRKC--VPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEG 246
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C+PS TFN+++N L + + + + G + N L+ GLC G L+ A
Sbjct: 247 CFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 306
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+LD C PN TY T+++GL ++G + +L ME G + +++L+SGL
Sbjct: 307 SLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGL 366
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K+GK EE M+L + KGC N+ Y ++ GL ++ EA +++ M + +P+
Sbjct: 367 FKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNA 426
Query: 339 VSYKKLIHGL 348
++ L+ G
Sbjct: 427 FTFSSLMKGF 436
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 1/284 (0%)
Query: 89 PNEALYTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P + ++N + QA D A+E + + + + +N+I G + A
Sbjct: 141 PTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNA 200
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
IE +MP C P T+ +++ L E + G N+L+ G
Sbjct: 201 IELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLING 260
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+ ++D + C PN TY+TL+HGLC KG +++A LL+RM S +
Sbjct: 261 LCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPN 320
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+ +I+GL KQG+ +G ++L M+ +G N Y ++ GL + + EA L
Sbjct: 321 EVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFK 380
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + + V Y L+ GLC + ++ +L +M +G P
Sbjct: 381 ESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAP 424
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 145/335 (43%), Gaps = 47/335 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P+ A + ++IN L + F + ++ + + K C + YN + I+G + G++ KA
Sbjct: 249 PSPATFNVLINGLCKKGDFTRVTKLVDNMFL-KGC-VPNEVTYNTL-IHGLCLKGKLDKA 305
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLV---------------------------SAKLYG 180
+ L M S C P+ T+ ++N LV S + G
Sbjct: 306 LSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSG 365
Query: 181 --------EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
E ++ + G +++ + L+ GLC + + A +L E + C PN
Sbjct: 366 LFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPN 425
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
T+S+LM G E GN +A + + M + V +++LI GL K GKV E M +
Sbjct: 426 AFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWA 485
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC--ERMSPSFVSYKKLIHGLCN 350
+M GC P+ +Y ++ GL D EA +L M+C P ++Y L + LC
Sbjct: 486 KMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCK 545
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
Q + +L M+ +G P ++V C F
Sbjct: 546 QSSISRAVDLLNSMLDRGCDP------DLVTCNIF 574
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 132/271 (48%), Gaps = 20/271 (7%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N LY+ +++ L + ++ D I+ + +K C + F +++K + + G KAIE
Sbjct: 390 NTVLYSALVDGLCRDRKPDEAMKILSEM-TDKGCAPNAFTFSSLMKGFFEV-GNSHKAIE 447
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
DM NC + ++++++ L E ++ G D + +++GLC
Sbjct: 448 VWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLC 507
Query: 210 ENGNLEAAFYVLDEFP--KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ G++E A + +E + + +P+V TY+ L + LC++ ++ A LL M G D D
Sbjct: 508 DAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPD 567
Query: 268 TVTFNILISGLR-KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
VT NI + LR K ++G K L+ E++ LL ++R A ++V
Sbjct: 568 LVTCNIFLRMLREKLDPPQDGAKFLD---------------ELVVRLLKRQRNLGASKIV 612
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
M+ + +SP ++ +++H LC K ++ V
Sbjct: 613 EVMLQKFLSPKASTWARVVHELCQPKKIQAV 643
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 158/308 (51%), Gaps = 9/308 (2%)
Query: 76 SVLNQYSK--RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
S +YS R D+N + +I++L +F E +++R+K E C ++ F +
Sbjct: 37 SATEEYSNGFRHDHNT----FGAMIHRLVSVNQFRPAEGMLERMKQED-CEVTEDVFLTI 91
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ YG + R AI M + P+ K++ V ++LV G Y + G
Sbjct: 92 CRGYGRVH-RPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKG 150
Query: 194 VEIDACCLNILLKGLCENG-NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
+ LNIL+K LC+N +E+AF + E P + C+P+ TY TL++GLC+ G + +A
Sbjct: 151 IPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQA 210
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LL+ ME +G+ V++ LI GL + ++E ++LLE M G PN +Y ++ G
Sbjct: 211 KELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDG 270
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L +A EL+ M+ R+ P+ V+Y LI+GLC + + +L +M QG P
Sbjct: 271 LCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPD 330
Query: 373 MGMWREIV 380
GM+ I+
Sbjct: 331 AGMYGRII 338
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 7/242 (2%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+IS+A E L +M PSV ++ +++ L + E + G+E +
Sbjct: 205 GKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTY 264
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L+ GLC++G+ A +L+ ++ PN+ TYSTL++GLC++G EA +L+RM
Sbjct: 265 SSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRL 324
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY-------QEVLYGLL 314
+G+ D + +ISGL +E ++ M G PN AS+ V+ GL
Sbjct: 325 QGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLC 384
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ A +L M +S ++ L+ C + + +L++M+ G +P G
Sbjct: 385 NNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEG 444
Query: 375 MW 376
MW
Sbjct: 445 MW 446
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 9/251 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ K +P+ YT +I+ L Q+ D ++++ + + + + F Y+ + +G
Sbjct: 218 EEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGI--EPNVFTYSSLMDGLCKSG 275
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
S+A+E L M P++ T++ ++N L + E I G++ DA
Sbjct: 276 HSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYG 335
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPN-------VRTYSTLMHGLCEKGNVEEAFGL 255
++ GLC N + A +DE PN V+ ++ ++ GLC + AF L
Sbjct: 336 RIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQL 395
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
M + GI + TF+ L+ K+G + + ++LE M GC P+ + ++ GL D
Sbjct: 396 YLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWD 455
Query: 316 KKRFPEAKELV 326
+K+ E EL+
Sbjct: 456 RKKVRETTELL 466
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 171/357 (47%), Gaps = 36/357 (10%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+S + V+K+ D +S + S + Y +I+KL + D + ++Q
Sbjct: 39 VSESHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQ 98
Query: 116 RIKVEKLCRFSDGFFYNVIKIY--GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
++K+E + S F VIK Y N+ + ++ + + + C PSVK +NLVL+ L
Sbjct: 99 QMKLENV-PCSQELFQFVIKCYRRSNLG---EQGLKMFYRIREFGCEPSVKIYNLVLDAL 154
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN- 232
+S L+ I +Y + G+E + N+LLK LC+NG ++ A +L E + C+P+
Sbjct: 155 LSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDD 214
Query: 233 -----------------------------VRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
V Y+ L+HG+C++ +EAF L+ M G
Sbjct: 215 VSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRG 274
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+D + ++++ +IS L G VE + + RM +GC PN ++ ++ G + R +A
Sbjct: 275 VDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAV 334
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L MI E +SP+ V+Y LIHGLC+ +++ V +M + P + + I+
Sbjct: 335 GLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTII 391
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 148/349 (42%), Gaps = 67/349 (19%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK------------VEKLCRFSDGF--- 129
K +P++ YT +I+ + + D ++ + + V K CRF + F
Sbjct: 208 KGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLM 267
Query: 130 --------------FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF-NLVLNLLV 174
+ VI +M G + ++ M C P+V+TF +L+ V
Sbjct: 268 NEMVDRGVDPNVISYSTVISCLSDM-GNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFV 326
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN------ 228
++ G+ G++ + GV + N L+ GLC +GN++ A V ++ K +
Sbjct: 327 RGRV-GDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVT 385
Query: 229 -----------------------------CEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
C PNV Y+ ++ LC+ ++AF L++ M
Sbjct: 386 TYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNM 445
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S+G +TFN I GL + G+VE M +L++M+ C PN +Y E+L GL F
Sbjct: 446 ISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAF 505
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
EA L+ + ++ V+Y +++G + + V +L KM+ G
Sbjct: 506 REACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNG 554
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 3/229 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +YT +++ L Q FD D++ + + C + F N IK AGR+ A+
Sbjct: 417 PNVVVYTCMVDVLCQMSMFDQAFDLIDNM-ISDGCPPTVITFNNFIKGLCR-AGRVEWAM 474
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M Y C P+++T+N +L+ L A + E G+ + VE D N ++ G
Sbjct: 475 NVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGF 534
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-IDAD 267
NG + +L + + + T +T ++ C+ G V+ A +L+ + +E AD
Sbjct: 535 SFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRAD 594
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+T I++ G+ EE + L M +G +PN A++ ++ G K
Sbjct: 595 IITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSK 643
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 8/167 (4%)
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
FY + EF CEP+V+ Y+ ++ L + + L M+SEG++ + T+N+L+
Sbjct: 132 FYRIREF---GCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKA 188
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L + GKV+ KLL M KGC P+ SY V+ + +A+EL + P
Sbjct: 189 LCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELA-----MKFEPV 243
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
Y LIHG+C + ++ ++ +MV +G P + + ++ C++
Sbjct: 244 VPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLS 290
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/275 (18%), Positives = 104/275 (37%), Gaps = 36/275 (13%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +AI M + P+V T++ ++ + + G +
Sbjct: 363 GNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVY 422
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++ LC+ + AF ++D C P V T++ + GLC G VE A +L++ME
Sbjct: 423 TCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEK 482
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ T+N L+ GL + E L+ ++ + + +Y ++YG +
Sbjct: 483 YECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQ 542
Query: 322 AKELVGRMIC------------------------------------ERMSPSFVSYKKLI 345
+L+G+M+ + +++ ++
Sbjct: 543 VLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIIL 602
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
G+CN E+ L +M+++G P + W +V
Sbjct: 603 WGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLV 637
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 159/300 (53%), Gaps = 6/300 (2%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
+DP + + N S++K +N N A Y I+ KLAQ K+F A++ ++ ++ E C+F +G
Sbjct: 144 KDPQHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKFQAVDRVLHQMTYEA-CKFHEG 202
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F N++K Y G K + + + PS K + LNLLV + ++ +
Sbjct: 203 VFINLMKHYSK-CGFHEKVFDAFLSIQTIVREKPSPKAISSCLNLLVDSNQVDLVRKLLL 261
Query: 188 SAAK-LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE-PNVRTYSTLMHGLCE 245
A + L + + C NIL+K C G++++AF V+ E PNV TYSTLM GLC
Sbjct: 262 YAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCR 321
Query: 246 KGNVEEAFGLLERMES-EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
G ++EAF L E M S + I D +T+N+LI+G ++GK + ++E MK GC PN
Sbjct: 322 NGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVF 381
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ GL + +AK ++ M + P ++Y LI+ +++ +L +M
Sbjct: 382 NYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEM 441
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 166/343 (48%), Gaps = 22/343 (6%)
Query: 72 ISVISVLNQYSKRK-DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
+ ++ L Y+KR Y PN ++ +++ + D+ ++++ ++ K + +
Sbjct: 253 VDLVRKLLLYAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKY-SYPNVIT 311
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYN-CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
Y+ + GR+ +A E +M S + P T+N+++N G +
Sbjct: 312 YSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLIN--------GFCREGKADR 363
Query: 190 AKLGVEI---DACCLNI-----LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
A+ +E + CC N+ L+ GLC+ G L+ A VL E +P+ TY++L++
Sbjct: 364 ARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLIN 423
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
G ++EA LL M+ ADTVTFN+++ GL ++G+ +E + ++E++ +G Y
Sbjct: 424 FFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYL 483
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N SY+ VL L +A +L+G M+ P + + +L+ LC + + D L
Sbjct: 484 NKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATAL 543
Query: 362 KKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVDSLAS 404
+V GF P+ W ++ + +R +YV E +D L +
Sbjct: 544 FDLVDMGFQPQHDSWELLIDLIC---RDRKLLYVFELLDELVT 583
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 161/308 (52%), Gaps = 3/308 (0%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ ++VL++ +R+ P+ YT+++ + + ++ ++ +K C D YN
Sbjct: 178 NALAVLDEMLRRRCV-PDVVTYTILLEATCKRSGYKQAMKLLDEMR-DKGCT-PDIVTYN 234
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
V+ GR+ AIE L ++PSY C P+ ++N+VL L +A+ + + + + +
Sbjct: 235 VVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK 294
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G + N+L+ LC G +E A VL++ PK C PN +Y+ L+H C++ +++A
Sbjct: 295 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKA 354
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L+ M S G D V++N L++ L + G+V+ ++LL ++K KGC P SY V+ G
Sbjct: 355 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 414
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L + EA EL+ M+ + + P ++Y + GLC + +ED K+ G P
Sbjct: 415 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 474
Query: 373 MGMWREIV 380
++ I+
Sbjct: 475 TVLYNAII 482
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 127/231 (54%), Gaps = 8/231 (3%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+GR ++A L C P V +N ++ A G++ A+ VE DA
Sbjct: 111 SGRTAEARRVL-----AACGPDVMAYNAMMAGYCGA---GQVDAARRWCAERAVERDAYT 162
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L++GLC G A VLDE ++ C P+V TY+ L+ C++ ++A LL+ M
Sbjct: 163 CDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 222
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G D VT+N++++G+ ++G+V++ ++ L+ + GC PN+ SY VL GL +R+
Sbjct: 223 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 282
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A+EL+G M + P+ V++ LI LC + LVE VL+++ + G P
Sbjct: 283 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSP 333
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR + A+ L +M C P V T+ ++L Y + + G D
Sbjct: 174 GRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTY 233
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+++ G+C+ G ++ A L P CEPN +Y+ ++ GLC E+A L+ M
Sbjct: 234 NVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQ 293
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G + VTFN+LIS L ++G VE +++LE++ GC PNS SY +L+ +K+ +
Sbjct: 294 KGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDK 353
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A + M+ P VSY L+ LC V+ +L ++ +G P + + ++
Sbjct: 354 AMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVID 413
Query: 382 CVT 384
+T
Sbjct: 414 GLT 416
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 140/280 (50%), Gaps = 2/280 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ L A+R++ E++M + +K C + +N++ + G + A+
Sbjct: 263 PNTVSYNIVLKGLCTAERWEDAEELMGEMG-QKGCP-PNVVTFNMLISFLCRKGLVEPAL 320
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +P Y C P+ ++N +L+ K + G D N LL L
Sbjct: 321 EVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 380
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +G ++ A +L + + C P + +Y+T++ GL + G +EA LL M S+G+ D
Sbjct: 381 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 440
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ + +GL ++ ++E+ ++ +++ G PN+ Y ++ GL ++ A +L
Sbjct: 441 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 500
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
MI P+ +Y LI GL + L+++ +L ++ +G
Sbjct: 501 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 161/308 (52%), Gaps = 3/308 (0%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ ++VL++ +R+ P+ YT+++ + + ++ ++ +K C D YN
Sbjct: 176 NALAVLDEMLRRRCV-PDVVTYTILLEATCKRSGYKQAMKLLDEMR-DKGCT-PDIVTYN 232
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
V+ GR+ AIE L ++PSY C P+ ++N+VL L +A+ + + + + +
Sbjct: 233 VVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK 292
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G + N+L+ LC G +E A VL++ PK C PN +Y+ L+H C++ +++A
Sbjct: 293 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA 352
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L+ M S G D V++N L++ L + G+V+ ++LL ++K KGC P SY V+ G
Sbjct: 353 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 412
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L + EA EL+ M+ + + P ++Y + GLC + +ED K+ G P
Sbjct: 413 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 472
Query: 373 MGMWREIV 380
++ I+
Sbjct: 473 TVLYNAII 480
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 128/231 (55%), Gaps = 8/231 (3%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+GR ++A L C P V +N ++ A G++ A++ VE DA
Sbjct: 109 SGRTAEARRVLA-----ACGPDVMAYNAMVAGYCGA---GQLDAARRLVAEMPVEPDAYT 160
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L++GLC G A VLDE ++ C P+V TY+ L+ C++ ++A LL+ M
Sbjct: 161 YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 220
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G D VT+N++++G+ ++G+V++ ++ L+ + GC PN+ SY VL GL +R+
Sbjct: 221 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 280
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A+EL+G M + P+ V++ LI LC + LVE VL+++ + G P
Sbjct: 281 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTP 331
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 7/298 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISK 146
P+ Y ++ A + DA ++ + VE D + YN + I G GR +
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEMPVE-----PDAYTYNTL-IRGLCGRGRTAN 176
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ L +M C P V T+ ++L Y + + G D N+++
Sbjct: 177 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 236
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G+C+ G ++ A L P CEPN +Y+ ++ GLC E+A L+ M +G
Sbjct: 237 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 296
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ VTFN+LIS L ++G VE +++LE++ GC PNS SY +L+ +K+ +A +
Sbjct: 297 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 356
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
M+ P VSY L+ LC V+ +L ++ +G P + + ++ +T
Sbjct: 357 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLT 414
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 141/282 (50%), Gaps = 2/282 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ L A+R++ E++M + +K C + +N++ + G + A+
Sbjct: 261 PNTVSYNIVLKGLCTAERWEDAEELMGEMG-QKGCP-PNVVTFNMLISFLCRKGLVEPAL 318
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +P Y C P+ ++N +L+ K + G D N LL L
Sbjct: 319 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 378
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +G ++ A +L + + C P + +Y+T++ GL + G +EA LL M S+G+ D
Sbjct: 379 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 438
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ + +GL ++ ++E+ ++ +++ G PN+ Y ++ GL ++ A +L
Sbjct: 439 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 498
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
MI P+ +Y LI GL + L+++ +L ++ +G V
Sbjct: 499 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 161/308 (52%), Gaps = 3/308 (0%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ ++VL++ +R+ P+ YT+++ + + ++ ++ +K C D YN
Sbjct: 50 NALAVLDEMLRRRCV-PDVVTYTILLEATCKRSGYKQAMKLLDEMR-DKGCT-PDIVTYN 106
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
V+ GR+ AIE L ++PSY C P+ ++N+VL L +A+ + + + + +
Sbjct: 107 VVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK 166
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G + N+L+ LC G +E A VL++ PK C PN +Y+ L+H C++ +++A
Sbjct: 167 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA 226
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L+ M S G D V++N L++ L + G+V+ ++LL ++K KGC P SY V+ G
Sbjct: 227 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 286
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L + EA EL+ M+ + + P ++Y + GLC + +ED K+ G P
Sbjct: 287 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 346
Query: 373 MGMWREIV 380
++ I+
Sbjct: 347 TVLYNAII 354
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 113/192 (58%)
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
G++ A++ VE DA N L++GLC G A VLDE ++ C P+V TY+ L
Sbjct: 14 GQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTIL 73
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ C++ ++A LL+ M +G D VT+N++++G+ ++G+V++ ++ L+ + GC
Sbjct: 74 LEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGC 133
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
PN+ SY VL GL +R+ +A+EL+G M + P+ V++ LI LC + LVE
Sbjct: 134 EPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALE 193
Query: 360 VLKKMVQQGFVP 371
VL+++ + G P
Sbjct: 194 VLEQIPKYGCTP 205
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 135/291 (46%), Gaps = 5/291 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++ A + DA ++ + VE D + YN + GR + A+ L +
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEMPVE-----PDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M C P V T+ ++L Y + + G D N+++ G+C+ G
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A L P CEPN +Y+ ++ GLC E+A L+ M +G + VTFN+
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LIS L ++G VE +++LE++ GC PNS SY +L+ +K+ +A + M+
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
P VSY L+ LC V+ +L ++ +G P + + ++ +T
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLT 288
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 139/280 (49%), Gaps = 2/280 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ L A+R++ E++M + +K C + +N++ + G + A+
Sbjct: 135 PNTVSYNIVLKGLCTAERWEDAEELMGEMG-QKGCP-PNVVTFNMLISFLCRKGLVEPAL 192
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +P Y C P+ ++N +L+ K + G D N LL L
Sbjct: 193 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 252
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +G ++ A +L + + C P + +Y+T++ GL + G +EA LL M S+G+ D
Sbjct: 253 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 312
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ + +GL ++ ++E+ ++ +++ G PN+ Y ++ GL ++ A +L
Sbjct: 313 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 372
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
MI P+ +Y LI GL + L+++ +L ++ +
Sbjct: 373 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412
>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Glycine max]
Length = 449
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 167/316 (52%), Gaps = 13/316 (4%)
Query: 68 LRDPISVISVLNQYSKR--KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK-VEKLCR 124
+ DP +S+ ++Y ++ + Y P+ Y ++ KLA+++ FDA+E I+ +K E CR
Sbjct: 52 VEDPEEALSLFHRYKEQGFRHYYPS---YAALLYKLARSRMFDAVETILAHMKDTEMQCR 108
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
+ F + + YG KA+E MP +NC ++++FN +LN+L+ + E
Sbjct: 109 --ESVFIALFQHYGP-----EKAVELFNRMPQFNCTRTIQSFNALLNVLIDNDRFDEAND 161
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
I+ + ++G + NI++KG G A V DE ++ +P+V TY++L+ LC
Sbjct: 162 IFGKSYEMGFRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLC 221
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
KG++++A LLE M +G A+ VT+ +L+ GL K EE KL+ M +GC
Sbjct: 222 RKGDLDKAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPV 281
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ ++ L + + EAK L+ M R+ P V+Y LI+ LC + + VL +M
Sbjct: 282 NFGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEM 341
Query: 365 VQQGFVPRMGMWREIV 380
G VP +R +V
Sbjct: 342 QIGGCVPNAATYRMVV 357
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 122/268 (45%), Gaps = 8/268 (2%)
Query: 87 YNPNEALYTLII-NKLAQAKRFDAIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+ PN + +++ +LA+ + A E D M + +V+ YN + + G
Sbjct: 171 FRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQ-----PSVVTYNSLIGFLCRKGD 225
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA+ L DM + T+ L++ L S + E + + A G + +
Sbjct: 226 LDKAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGV 285
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ L + G +E A +L E K+ +P+V TY+ L++ LC++G EA+ +L M+ G
Sbjct: 286 LMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGG 345
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ T+ +++ GL + G E + +L M P S ++ ++ GLL +
Sbjct: 346 CVPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSC 405
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQ 351
++ M ++ S++ +I C++
Sbjct: 406 FVLEEMEKRKLEFDLESWETIIKSACSE 433
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 87/192 (45%), Gaps = 2/192 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + NE Y L++ L ++ + + +M + + C+ F ++ G G+
Sbjct: 238 QKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAY-RGCKAQPVNFGVLMNDLGK-RGK 295
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A L +M P V T+N+++N L E + G +A +
Sbjct: 296 VEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVPNAATYRM 355
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ GLC+ G+ E A VL+ P T++ ++ GL + GN++ + +LE ME
Sbjct: 356 VVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSCFVLEEMEKRK 415
Query: 264 IDADTVTFNILI 275
++ D ++ +I
Sbjct: 416 LEFDLESWETII 427
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 158/305 (51%), Gaps = 8/305 (2%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
DP + K Y ++ + +IN A F ++E ++ R+K EK F F
Sbjct: 69 DPPISDKIFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCF 128
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPS--YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+ K YG A KA++ LFD + + C + K+FN VLN+++ L+ Y
Sbjct: 129 IV-IFKAYGK-AHLPEKAVD-LFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYN 185
Query: 188 ---SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
A + + + N+++K +C+ G ++ A V + + CEP+V TY TLM GLC
Sbjct: 186 HVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLC 245
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ ++EA LL+ M+ +G VTFN+LI+GL K+G + KL++ M KGC PN
Sbjct: 246 KADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEV 305
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y +++GL K + +A L+ RM+ + P+ V+Y +I+GL Q D VL M
Sbjct: 306 TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALM 365
Query: 365 VQQGF 369
++G+
Sbjct: 366 EERGY 370
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 116/236 (49%), Gaps = 10/236 (4%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC- 199
G + AI+ DM C P V T+ +++ L A E + ++ID C
Sbjct: 212 VGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDE-----MQIDGCF 266
Query: 200 ----CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
N+L+ GLC+ G+L A ++D + C PN TY+TL+HGLC KG +E+A L
Sbjct: 267 PSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISL 326
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
L+RM S + VT+ +I+GL KQG+ +G +L M+ +G N Y ++ GL
Sbjct: 327 LDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFK 386
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + EA L M + + + Y +I GLC +D VL +M +G P
Sbjct: 387 EGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTP 442
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 129/293 (44%), Gaps = 45/293 (15%)
Query: 131 YNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV--------------- 174
YN + I+G + G++ KAI L M S C P+V T+ ++N LV
Sbjct: 307 YNTL-IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALM 365
Query: 175 ------------SAKLYG--------EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
S + G E ++ G E++ + ++ GLC +G
Sbjct: 366 EERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKP 425
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A VL E + C PN T S+LM G E GN A + + M + V +++L
Sbjct: 426 DDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVL 485
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE-- 332
I GL K GKV+E M + +M GKGC P+ +Y ++ GL +A +L M+C+
Sbjct: 486 IHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGP 545
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
P V+Y L++ LC Q + +L M+ +G P ++V C F
Sbjct: 546 DSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDP------DLVTCTIF 592
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 128/276 (46%), Gaps = 20/276 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K Y N +Y+ +I+ L + + D +++ + K C + +++K + AG
Sbjct: 403 KGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEM-TNKGCTPNAYTCSSLMKGFFE-AGNS 460
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+E DM +N + ++++++ L E ++T G + D + +
Sbjct: 461 HRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSM 520
Query: 205 LKGLCENGNLEAAFYVLDEFPKQ--NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+ GL G +E A + +E Q + +P+V TY+ L++ LC++ ++ A LL M
Sbjct: 521 INGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDR 580
Query: 263 GIDADTVTFNILISGLR-KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D D VT I + LR K ++G + L+ E++ LL ++R
Sbjct: 581 GCDPDLVTCTIFLRMLREKLDPPQDGREFLD---------------ELVVRLLKRQRVLG 625
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
A ++V M+ + + P ++ +++ LC K V+ V
Sbjct: 626 ASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAV 661
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 168/337 (49%), Gaps = 7/337 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+P ++++ D ++ + V N SK+ ++ P+ ++Y I+ KL +A F+ + +++
Sbjct: 62 FTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLE 121
Query: 116 RIKVEKLCRFSDGFFYNVIKIYG--NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+K+ C F G F ++ YG + + ++ + D Y P + +N++LN+L
Sbjct: 122 EMKLSG-CEFDRGIFLIFVESYGKFELYDEVVGIVKVMED--EYRIKPDTRFYNVLLNVL 178
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
V A ++ ++S + + D NIL+K LC+ + A +++E P P+
Sbjct: 179 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 238
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
T++T+M G E GN++ A + E+M G VT N+LI+G KQG++++ + ++
Sbjct: 239 TTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 298
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+G P+ +Y ++ GL A E+V M+ + P +Y LI GLC
Sbjct: 299 AVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGE 358
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
+E+ +L +MV + P + I+ + K+NR
Sbjct: 359 IEEAVKILDQMVSRDCSPNAVTYNAIIS--SLCKENR 393
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 135/279 (48%), Gaps = 8/279 (2%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
V+ ++ P+ Y +++N L A + +E + V + R F +
Sbjct: 151 VVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSM-VRRRIRHDVSTFNIL 209
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAA 190
IK A ++ AI + +MPSY P TF ++ + G + G I
Sbjct: 210 IKALCK-AHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEG---GNLDGALRIKEQMV 265
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ G +N+L+ G C+ G ++ A + E + P+ TY+TL++GLC+ G+ +
Sbjct: 266 EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAK 325
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A +++ M G+D D T+N LISGL K G++EE +K+L++M + C PN+ +Y ++
Sbjct: 326 HAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAII 385
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
L + R EA E+ + + + P ++ LI GLC
Sbjct: 386 SSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLC 424
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 144/304 (47%), Gaps = 8/304 (2%)
Query: 80 QYSKRKDYNPNEALYTLIIN---KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
Q + + + P++ Y ++N K+ AK + D M ++ D + YN +
Sbjct: 297 QEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLD-----PDIYTYNSLIS 351
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G I +A++ L M S +C P+ T+N +++ L E I G+
Sbjct: 352 GLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILP 411
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D C N L++GLC + N ++A + +E + C P+ TY+ L+ LC +EEA LL
Sbjct: 412 DVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLL 471
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ ME G + V +N LI G K ++EE ++ + M+ +G +S +Y ++ GL
Sbjct: 472 KEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKS 531
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
KR +A +L+ +MI E + P +Y L+ C ++ +++ M G P + +
Sbjct: 532 KRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTY 591
Query: 377 REIV 380
++
Sbjct: 592 ATLI 595
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 162/351 (46%), Gaps = 38/351 (10%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VE 120
+ +L+Q R D +PN Y II+ L + R D +I + + ++
Sbjct: 363 VKILDQMVSR-DCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQ 421
Query: 121 KLCRFS-------------------DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWP 161
LC S D F YN++ + ++ +A+ L +M C
Sbjct: 422 GLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCAR 481
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
+V +N +++ K E + I+ GV D+ N L+ GLC++ +E A ++
Sbjct: 482 NVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLM 541
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
D+ + P+ TY++L+ C+ G++++A +++ M S G + D VT+ LISGL K
Sbjct: 542 DQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKA 601
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G+V+ +LL ++ KG +Y V+ L + R EA L M+ + P ++Y
Sbjct: 602 GRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITY 661
Query: 342 KKLIHGLCN--QKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDN 389
K + GLCN + E VD+ + +M+++G +P + + G T D+
Sbjct: 662 KIVYRGLCNGGGPIGEAVDFTV-EMIERGNIPEFSSFVMLAEGLCTLSMDD 711
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 113/263 (42%), Gaps = 35/263 (13%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + A+ M Y C + T N+++N + A G D
Sbjct: 251 GGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFT 310
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ GLC+ G+ + A V+D +P++ TY++L+ GLC+ G +EEA +L++M
Sbjct: 311 YNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMV 370
Query: 261 SEGIDADTVTFNILISGLRKQGKVEE---------------------------------- 286
S + VT+N +IS L K+ +V+E
Sbjct: 371 SRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHK 430
Query: 287 -GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
M L E MKGKGC P+ +Y ++ L ++ EA L+ M + + V Y LI
Sbjct: 431 SAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLI 490
Query: 346 HGLCNQKLVEDVDWVLKKMVQQG 368
G C K +E+ + + +M QG
Sbjct: 491 DGFCKNKRIEEAEEIFDEMELQG 513
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 165/313 (52%), Gaps = 3/313 (0%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
++DP +++ Y + K + + Y+ +I KLA+++RF+A+E I+ ++ + R ++
Sbjct: 59 VKDPCEALALFENYHE-KGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNI-RCNE 116
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F +I+ YG A + K IE MPS+NC+ ++++FN++LN LV + + I+
Sbjct: 117 TLFVALIQHYGK-AHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQ 175
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
A ++G ++ NI++KG + G E A + DE ++ +P+V TY++ + LC KG
Sbjct: 176 QAYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKG 235
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ A L + M +G + VT+ +L+ G GK +E KL+ M+ GC +Y
Sbjct: 236 EMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYG 295
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ L E + L+ M R+ P V+Y L++ LC + V D VL KM
Sbjct: 296 VLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVG 355
Query: 368 GFVPRMGMWREIV 380
G P +R ++
Sbjct: 356 GCDPNAATYRMMI 368
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%)
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A + + + ++ + + +YS+L++ L E +L + + I + F LI
Sbjct: 65 ALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQ 124
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
K VE+G++L +M C+ S+ +L L+D +F +A E+ + P
Sbjct: 125 HYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFRP 184
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ VSY +I G + E + +M+++G P + + +G
Sbjct: 185 NSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLG 229
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 135/254 (53%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YNV+ GR+ AIE L ++PSY C P+ ++N+VL L +A+ + + + +
Sbjct: 26 DIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELM 85
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G + N+L+ LC G +E A VL++ PK C PN +Y+ L+H C++
Sbjct: 86 GEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQ 145
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+++A L+ M S G D V++N L++ L + G+V+ ++LL ++K KGC P SY
Sbjct: 146 KKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISY 205
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
V+ GL + EA EL+ M+ + + P ++Y + GLC + +ED K+
Sbjct: 206 NTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQD 265
Query: 367 QGFVPRMGMWREIV 380
G P ++ I+
Sbjct: 266 MGIRPNTVLYNAII 279
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 141/282 (50%), Gaps = 2/282 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ L A+R++ E++M + +K C + +N++ + G + A+
Sbjct: 60 PNTVSYNIVLKGLCTAERWEDAEELMGEMG-QKGCP-PNVVTFNMLISFLCRKGLVEPAL 117
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +P Y C P+ ++N +L+ K + G D N LL L
Sbjct: 118 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 177
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +G ++ A +L + + C P + +Y+T++ GL + G +EA LL M S+G+ D
Sbjct: 178 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 237
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ + +GL ++ ++E+ ++ +++ G PN+ Y ++ GL ++ A +L
Sbjct: 238 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 297
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
MI P+ +Y LI GL + L+++ +L ++ +G V
Sbjct: 298 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 339
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D N+++ G+C+ G ++ A L P CEPN +Y+ ++ GLC E+A
Sbjct: 22 GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 81
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L+ M +G + VTFN+LIS L ++G VE +++LE++ GC PNS SY +L+
Sbjct: 82 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 141
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+K+ +A + M+ P VSY L+ LC V+ +L ++ +G P
Sbjct: 142 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 201
Query: 373 MGMWREIVGCVT 384
+ + ++ +T
Sbjct: 202 LISYNTVIDGLT 213
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 90/163 (55%)
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ + A +LDE + C P++ TY+ +++G+C++G V++A L+ + S G + +T
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V++NI++ GL + E+ +L+ M KGC PN ++ ++ L K A E++ +
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +P+ +SY L+H C QK ++ L MV +G P
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 165
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%)
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+ ++ MKLL+ M+ KGC P+ +Y V+ G+ + R +A E + + P+ V
Sbjct: 4 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 63
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
SY ++ GLC + ED + ++ +M Q+G P +
Sbjct: 64 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 97
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 163/314 (51%), Gaps = 27/314 (8%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
+ Y+LI + A + F ++E+++ ++K E+ F + F + K YG A KA++
Sbjct: 63 SFYSLIESH-ASSLDFRSLEEVLHQMKRERRV-FLEKNFIVMFKAYGK-AHLPEKAVDLF 119
Query: 152 FDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY---TSAAKLGVEIDACCLNILLKG 207
M + C +VK+FN VLN++V L+ Y ++ L + +A N+++K
Sbjct: 120 HRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKA 179
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+C G ++ A V E P +NC P+ TYSTLMHGLC++ ++EA LL+ M+ EG +
Sbjct: 180 MCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPN 239
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V FN+LIS L K+G + KL++ M KGC PN +Y +++GL K + +A L+
Sbjct: 240 LVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLN 299
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG------------------- 368
+M+ + P+ V++ LI+G Q D VL + +G
Sbjct: 300 QMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEG 359
Query: 369 -FVPRMGMWREIVG 381
F M +W+E+VG
Sbjct: 360 KFNQAMELWKEMVG 373
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 138/279 (49%), Gaps = 1/279 (0%)
Query: 94 YTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
+ ++N + Q F+ A+E + + L + +N++ G + KAIE
Sbjct: 135 FNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFR 194
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
++P NC P T++ +++ L + E + G + N+L+ LC+ G
Sbjct: 195 EIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKG 254
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+L A ++D + C PN TY+ L+HGLC KG +E+A LL +M S + VTF
Sbjct: 255 DLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFG 314
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
LI+G QG+ +G ++L ++ +G N Y ++ GL + +F +A EL M+ +
Sbjct: 315 TLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGK 374
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P+ + Y LI GLC + +++ L +M +G++P
Sbjct: 375 GCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLP 413
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 34/352 (9%)
Query: 52 HKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIE 111
H + L+ V+K L I V + R + P+ Y+ +++ L + +R D
Sbjct: 167 HPNALTFNLVIKAMCRLGLVDKAIEVFREIPLR-NCAPDNYTYSTLMHGLCKEERIDEAV 225
Query: 112 DIMQRIKVE--------------KLCR---------FSDGFF----------YNVIKIYG 138
++ ++VE LC+ D F YN +
Sbjct: 226 SLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGL 285
Query: 139 NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
+ G++ KA+ L M S C P+ TF ++N V + + S G +
Sbjct: 286 CLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNE 345
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+ L+ GLC+ G A + E + C PN YS L+ GLC +G ++EA G L
Sbjct: 346 YVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSE 405
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M+++G ++ T++ L+ G + G + + + + M C N Y ++ GL +
Sbjct: 406 MKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGK 465
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
F EA + +M+ + V+Y +IHG CN LVE + +M+ QG V
Sbjct: 466 FMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPV 517
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 2/266 (0%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
SK + +PN + L+I + + D ++ + I + D + Y+ +
Sbjct: 161 SKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCA--PDNYTYSTLMHGLCKE 218
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
RI +A+ L +M +P++ FN++++ L G + + G +
Sbjct: 219 ERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTY 278
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC G LE A +L++ C PN T+ TL++G +G + +L +E+
Sbjct: 279 NALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEA 338
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + ++ LISGL K+GK + M+L + M GKGC PN+ Y ++ GL + + E
Sbjct: 339 RGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDE 398
Query: 322 AKELVGRMICERMSPSFVSYKKLIHG 347
A+ + M + P+ +Y L+ G
Sbjct: 399 ARGFLSEMKNKGYLPNSFTYSSLMRG 424
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 121/273 (44%), Gaps = 20/273 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN +Y+ +I+ L + + D + +K + + F Y+ + AG
Sbjct: 374 KGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGY--LPNSFTYSSLMRGYFEAGDS 431
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KAI +M + NC + +++++N L + E ++ G+++D + +
Sbjct: 432 HKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSM 491
Query: 205 LKGLCENGNLEAAFYVLDEFPKQN--CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+ G C +E + ++ Q +P+V TY+ L++ C + ++ A +L M +
Sbjct: 492 IHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQ 551
Query: 263 GIDADTVTFNILISGLRKQ-GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D D +T +I + LR+ ++G + L+ E++ L+ ++R
Sbjct: 552 GCDPDFITCDIFLKTLRENMNPPQDGREFLD---------------ELVVRLVKRQRTIG 596
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
A +++ M+ + + P ++ ++ +C K V
Sbjct: 597 ASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNV 629
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 145/285 (50%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN Y ++N L +A + + +++ + + + D Y+V+ A R+ +
Sbjct: 254 YVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGV--TPDVITYSVLVDAFCKASRVDE 311
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+E L M S C P+V TFN +++ L + GE I + D NIL+
Sbjct: 312 ALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIA 371
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+ GN E A + +E +N +P+V T+ L+ GLC+ G VE A +L+ M + G+
Sbjct: 372 GACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 431
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ VT+N+L+ GL K G++EE + LE M GC P S +Y ++Y L R +A +LV
Sbjct: 432 NVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLV 491
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ P V+Y L+ GL E VL++MV +G P
Sbjct: 492 SKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQP 536
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 2/258 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN + II+ L ++ R + E ++V D +N++ AG +A
Sbjct: 325 TPNVVTFNSIIDGLCKSDR--SGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQA 382
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M + N P V TF +++ L A + I LGV + N+L+ G
Sbjct: 383 SALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHG 442
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC++G +E L+E C P TY +L++ LC ++A L+ +++S G D D
Sbjct: 443 LCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPD 502
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TVT+NIL+ GL K GK E+ + +LE M GKG P+S ++ GL EL+
Sbjct: 503 TVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLR 562
Query: 328 RMICERMSPSFVSYKKLI 345
++ + M P + ++
Sbjct: 563 VVLAKGMLPDATTCSSIL 580
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 37/328 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC----------RFSDGFFYN------ 132
PN Y+++IN L + R D +++Q + K C F DG
Sbjct: 149 PNVVTYSVLINGLCKVGRIDEARELIQEM-TRKSCDVLPNIITYNSFLDGLCKQSMTAEA 207
Query: 133 --VIKIYGNMAGRISKAIETLF------------------DMPSYNCWPSVKTFNLVLNL 172
+++ + + R+S T DM + P+V T+N ++N
Sbjct: 208 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNG 267
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
L A + S GV D ++L+ C+ ++ A +L + C PN
Sbjct: 268 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 327
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
V T+++++ GLC+ EAF + ++ + + D VTFNILI+G K G E+ L E
Sbjct: 328 VVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFE 387
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M K P+ ++ ++ GL + A++++ M + P+ V+Y L+HGLC
Sbjct: 388 EMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSG 447
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+E+ L++MV G VP + +V
Sbjct: 448 RIEEPCEFLEEMVSSGCVPESMTYGSLV 475
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 121/245 (49%), Gaps = 8/245 (3%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTS-AAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
SV +N+VL L A I+ A+ GV N ++ GLC++ L A +
Sbjct: 44 SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+E K+ P+V TY+TL+ LC+ G++EEA L M S G + VT+++LI+GL K
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163
Query: 281 QGKVEEGMKLLERMKGKGC--YPNSASYQEVLYGLLDKKRFPEAKELVG--RMICERMSP 336
G+++E +L++ M K C PN +Y L GL + EA EL+ R R+SP
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYV 395
V++ LI GLC K + + M+ G+VP + + +V G K R +
Sbjct: 224 DTVTFSTLIDGLC--KCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMI 281
Query: 396 TETVD 400
VD
Sbjct: 282 ESMVD 286
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 7/255 (2%)
Query: 131 YNVIKIYGNMAGRISKAIETL-FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN++ AG ++A+E +M P++ T+N ++N L + G ++
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
K G D N L+ LC+ G+LE A + + C PNV TYS L++GLC+ G +
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167
Query: 250 EEAFGLLERMESEGIDA--DTVTFNILISGLRKQGKVEEGMKLLERMKGKG--CYPNSAS 305
+EA L++ M + D + +T+N + GL KQ E +L+ ++ P++ +
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+ ++ GL + EA MI P+ V+Y L++GLC +E +++ MV
Sbjct: 228 FSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285
Query: 366 QQGFVPRMGMWREIV 380
+G P + + +V
Sbjct: 286 DKGVTPDVITYSVLV 300
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 151/297 (50%), Gaps = 2/297 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ P+ YT+++ + + ++ ++ K C D YNV+ GR
Sbjct: 184 RRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRA-KGC-APDIITYNVVVNGICQEGR 241
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ AIE L +PS+ C P+ ++N+VL L +A+ + + + + ++ G + N+
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ LC G +E A VLD+ PK C PN +Y+ ++H C++ ++ A +E M S G
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D V++N L++ L + G+V+ ++LL ++K KGC P SY V+ GL + EA
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEAL 421
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL+ M+ + + P ++Y + GLC + +E+ K+ G P ++ I+
Sbjct: 422 ELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAIL 478
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 7/297 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKA 147
P+ Y ++ + DA ++ + +E D + YN + I G GR A
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRLVADMPMEP-----DSYTYNTL-IRGLCGRGRTGNA 175
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L DM C P V T+ ++L Y + + G D N+++ G
Sbjct: 176 LVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNG 235
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+C+ G ++ A L P CEPN +Y+ ++ GLC E+A L+ M +G +
Sbjct: 236 ICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPN 295
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VTFN+LIS L ++G VE M++L+++ GC PNS SY +L+ +K+ A V
Sbjct: 296 VVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 355
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
M+ P VSY L+ LC V+ +L ++ +G P + + ++ +T
Sbjct: 356 LMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT 412
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 138/291 (47%), Gaps = 16/291 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------- 141
PN Y +++ L A+R++ E +M + G+ NV+ NM
Sbjct: 259 PNTVSYNIVLKGLCTAERWEDAEKLMAEMS-------QKGYPPNVVTF--NMLISFLCRR 309
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A+E L +P Y C P+ ++N +L+ K G D
Sbjct: 310 GLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSY 369
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL LC G ++AA +L + + C P + +Y+T++ GL + G +EA LL M +
Sbjct: 370 NTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVT 429
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G+ D +T++ + SGL ++ ++EE ++ +++ G PN+ Y +L GL ++
Sbjct: 430 KGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHN 489
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
A +L MI P+ +Y LI GL + LV++ +L ++ +G V +
Sbjct: 490 AIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSK 540
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 3/177 (1%)
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E D N ++ G C G L+AA ++ + P EP+ TY+TL+ GLC +G A
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAARRLVADMPM---EPDSYTYNTLIRGLCGRGRTGNALV 177
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+L+ M G D VT+ IL+ K+ ++ MKLL+ M+ KGC P+ +Y V+ G+
Sbjct: 178 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGIC 237
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ R +A E + + P+ VSY ++ GLC + ED + ++ +M Q+G+ P
Sbjct: 238 QEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPP 294
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 152/297 (51%), Gaps = 2/297 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ P+ YT+++ + + ++ ++ +K C D YNV+ GR
Sbjct: 180 RRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR-DKGC-APDIVTYNVVVNGICQEGR 237
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+E L +PSY C P+ ++N+VL L +A+ + + + + ++ G + N+
Sbjct: 238 VDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNM 297
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ LC G +E A +LD+ PK C PN +Y+ ++H C++ ++ A +E M S G
Sbjct: 298 LISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSG 357
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D V++N L++ L + G+V+ ++LL ++K KGC P SY V+ GL + EA
Sbjct: 358 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEAL 417
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL+ M+ + + P ++Y + GLC + +E+ K+ G P ++ I+
Sbjct: 418 ELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAIL 474
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 2/282 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ L A+R++ E +M + + R + +N++ + G + A+
Sbjct: 255 PNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKG--RPPNVVTFNMLISFLCRRGLVEPAM 312
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +P Y C P+ ++N +L+ K G D N LL L
Sbjct: 313 EILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTAL 372
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G ++AA +L + + C P + +Y+T++ GL + G EEA LL M ++G+ D
Sbjct: 373 CRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDI 432
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ + SGL ++G++EE +K +++ G PN+ Y +L GL ++ A +L
Sbjct: 433 ITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTY 492
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
M+ P+ +Y LI GL + LV++ ++ ++ +G V
Sbjct: 493 MVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVV 534
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 127/231 (54%), Gaps = 8/231 (3%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+GR ++A L +C P V ++N ++ + G++ A + +E D
Sbjct: 103 SGRTAEARRVLA-----SCEPDVMSYN---AMVAGYCVTGQLDNARRLVAAMPMEPDTYT 154
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L++GLC G + A VLD+ ++ C P+V TY+ L+ C++ ++A LL+ M
Sbjct: 155 YNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR 214
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G D VT+N++++G+ ++G+V++ M+ L+ + GC PN+ SY VL GL +R+
Sbjct: 215 DKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWE 274
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A++L+ M + P+ V++ LI LC + LVE +L ++ + G P
Sbjct: 275 DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTP 325
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 123/259 (47%), Gaps = 2/259 (0%)
Query: 127 DGFFYNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D + YN + I G GR A+ L DM C P V T+ ++L Y + +
Sbjct: 151 DTYTYNTL-IRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKL 209
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
G D N+++ G+C+ G ++ A L P CEPN +Y+ ++ GLC
Sbjct: 210 LDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCT 269
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
E+A L+ M +G + VTFN+LIS L ++G VE M++L+++ GC PNS S
Sbjct: 270 AERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLS 329
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y +L+ +K+ A V M+ P VSY L+ LC V+ +L ++
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389
Query: 366 QQGFVPRMGMWREIVGCVT 384
+G P + + ++ +T
Sbjct: 390 DKGCTPVLISYNTVIDGLT 408
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L + DA +++ ++K +K C YN + AG+ +A+
Sbjct: 360 PDIVSYNTLLTALCRGGEVDAAVELLHQLK-DKGCT-PVLISYNTVIDGLTKAGKTEEAL 417
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M + P + T++ + + L E + +G+ + N +L GL
Sbjct: 418 ELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGL 477
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ +A + C PN TY+ L+ GL +G V+EA ++ + S G+ + T
Sbjct: 478 CKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKT 537
Query: 269 V 269
+
Sbjct: 538 L 538
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 153/316 (48%), Gaps = 1/316 (0%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L P V + +DP+ + + N K + + Y II KL +F+A+E+++
Sbjct: 5 LLPKHVTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLV 64
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
++ +G + +K YG G++ +A+ M Y+C P+V ++N ++++LV
Sbjct: 65 DMRQNVGNHMLEGVYVGAMKNYGR-KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVD 123
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ + + +Y G+ D I +K C AA +L+ Q CE NV
Sbjct: 124 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVA 183
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y T++ G E+ +E + L +M + G+ TFN L+ L K+G V+E KLL+++
Sbjct: 184 YCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVI 243
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+G PN +Y + GL K A +VGR+I + P V+Y LI+GLC +
Sbjct: 244 KRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQ 303
Query: 356 DVDWVLKKMVQQGFVP 371
+ + L K+V +G P
Sbjct: 304 EAEVYLGKLVNEGLEP 319
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 117/228 (51%), Gaps = 6/228 (2%)
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
+ TFN +L++L E + + K GV + N ++GLC+ G L+AA ++
Sbjct: 216 LSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVG 275
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
Q +P+V TY+ L++GLC+ +EA L ++ +EG++ D+ T+N LI+G K G
Sbjct: 276 RLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGG 335
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
V+ ++L G P+ +Y+ ++ GL + A L + + + P+ + Y
Sbjct: 336 MVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV------GCVT 384
LI GL NQ L+ + + +M ++G +P + + +V GCV+
Sbjct: 396 TLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 3/249 (1%)
Query: 125 FSDGFFYNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
F D F +N++ I+G + ++ A+E L M P V T+N +LN L Y ++
Sbjct: 458 FPDIFTFNIL-IHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVM 516
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
Y + + G + NILL+ LC L+ A +L+E ++ P+ T+ TL+ G
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 244 CEKGNVEEAFGLLERMES-EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
C+ G+++ A+ L +ME + T T+NI+I ++ V KL + M + P+
Sbjct: 577 CKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+Y+ ++ G + + M+ PS + ++I+ LC + V + ++
Sbjct: 637 GYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696
Query: 363 KMVQQGFVP 371
+MVQ+G VP
Sbjct: 697 RMVQKGLVP 705
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 132/286 (46%), Gaps = 4/286 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKA 147
PN Y I L Q DA ++ R+ +++ + D YN + IYG + +A
Sbjct: 249 PNLFTYNFFIQGLCQKGELDAAVRMVGRL-IDQGPK-PDVVTYNYL-IYGLCKNSKFQEA 305
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L + + P T+N ++ + + I +A G D L+ G
Sbjct: 306 EVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDG 365
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC G A + +E + +PNV Y+TL+ GL +G + EA L M +G+ +
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPE 425
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TFNIL++GL K G V + L++ M KG +P+ ++ +++G + + A E++
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
M+ + P +Y L++GLC EDV K MV++G P +
Sbjct: 486 VMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNL 531
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 4/284 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +I L + +F E + ++ E L D F YN + I G G + +
Sbjct: 284 PDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGL--EPDSFTYNTL-IAGYCKGGMVQLA 340
Query: 149 ETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E + +N + P T+ +++ L ++ A G++ + N L+KG
Sbjct: 341 ERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L G + A + E ++ P V+T++ L++GLC+ G V +A GL++ M S+G D
Sbjct: 401 LSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TFNILI G Q K+E +++L+ M G P+ +Y +L GL ++ + E
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYK 520
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + +P+ ++ L+ LC ++ +L++M + P
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNP 564
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 118/256 (46%), Gaps = 9/256 (3%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +S A + M S +P + TFN++++ + I GV+ D
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTY 499
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL GLC+ E ++ C PN+ T++ L+ LC +++A GLLE M++
Sbjct: 500 NSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKN 559
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG---KGCYPNSASYQEVLYGLLDKKR 318
+ ++ D VTF LI G K G ++ L +M+ C ++ +Y +++ +K
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSC--STPTYNIIIHAFTEKLN 617
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
A++L M+ + P +Y+ ++ G C V+ L +M++ GF+P +
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGR 677
Query: 379 IVGCVTFGKDNRNRVY 394
++ C+ +RVY
Sbjct: 678 VINCLCV----EDRVY 689
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 129/295 (43%), Gaps = 2/295 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D P Y I++ L + FD + R++ + D + + + R
Sbjct: 106 DCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGIT--PDVYSFTIRMKSFCRTSRPH 163
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A+ L +M S C +V + V+ E ++ GV + N LL
Sbjct: 164 AALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLL 223
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC+ G+++ +LD+ K+ PN+ TY+ + GLC+KG ++ A ++ R+ +G
Sbjct: 224 HVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPK 283
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D VT+N LI GL K K +E L ++ +G P+S +Y ++ G A+ +
Sbjct: 284 PDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERI 343
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P +Y+ LI GLC++ + + + +G P + ++ ++
Sbjct: 344 LVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 109/223 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G ++A+ + P+V +N ++ L + L E + + ++ G+ +
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTF 429
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ GLC+ G + A ++ + P++ T++ L+HG + +E A +L+ M
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMD 489
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+D D T+N L++GL K K E+ M+ + M KGC PN ++ +L L + +
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDK 549
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A L+ M + ++P V++ LI G C ++ + +KM
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 13/262 (4%)
Query: 85 KDYNPNEALYTLIINKLA-QAKRFDAIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K Y P+ + ++I+ + Q K +A+E D+M V+ D + YN +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVD-----PDVYTYNSLLNGLCKT 509
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ +ET M C P++ TFN++L L + G+ V DA
Sbjct: 510 SKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTF 569
Query: 202 NILLKGLCENGNLEAAFYV---LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
L+ G C+NG+L+ A+ + ++E +C + TY+ ++H EK NV A L +
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEVYMVSC--STPTYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M + D T+ +++ G K G V+ G K L M G P+ + V+ L + R
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687
Query: 319 FPEAKELVGRMICERMSPSFVS 340
EA ++ RM+ + + P V+
Sbjct: 688 VYEAAGIIHRMVQKGLVPEAVN 709
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 171/345 (49%), Gaps = 18/345 (5%)
Query: 32 ALASPSASHQDSDHHAYKL--NHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNP 89
ALA PS +++ ++ L N D E DP + K Y
Sbjct: 7 ALAIPSTKTIETEPQSHPLHRNASDREHGIE--------HDPPISDKIFKSGPKMGSYKL 58
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
++ + +I+ A F ++E ++ R++ EK F + K YG A KA+
Sbjct: 59 GDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVV-IFKAYGK-AHLPEKAV- 115
Query: 150 TLFDMPSYN--CWPSVKTFNLVLNLLVSAKLYGEIQGIYT---SAAKLGVEIDACCLNIL 204
LFD +Y C +VK+FN VLN+++ L+ Y A + + + N++
Sbjct: 116 GLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLV 175
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+K +C+ G ++ A + + P C+P+V TY TLM GLC+ ++EA LL+ M+ +G
Sbjct: 176 IKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGC 235
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
VTFN+LI+GL K+G + KL++ M KGC PN +Y +++GL K + +A
Sbjct: 236 FPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAIS 295
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L+ RM+ + P+ V+Y +I+GL Q D VL M ++G+
Sbjct: 296 LLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGY 340
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 10/235 (4%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC-- 199
G + A++ DMP C P V T+ +++ L A E + ++ID C
Sbjct: 183 GLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDE-----MQIDGCFP 237
Query: 200 ---CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
N+L+ GLC+ G+L ++D + C PN TY+TL+HGLC KG +E+A LL
Sbjct: 238 SPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLL 297
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+RM S + VT+ +I+GL KQG+ +G ++L M+ +G + N Y ++ GL +
Sbjct: 298 DRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKE 357
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ EA +L M + + + Y +I GLC ++ VL +M P
Sbjct: 358 GKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKP 412
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 127/267 (47%), Gaps = 2/267 (0%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
+K + +PN + L+I + + D + + + V K C+ D + Y + A
Sbjct: 160 AKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSK-CQ-PDVYTYCTLMDGLCKA 217
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
RI +A+ L +M C+PS TFN+++N L + + + G +
Sbjct: 218 DRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTY 277
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC G LE A +LD C PNV TY T+++GL ++G + +L ME
Sbjct: 278 NTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEE 337
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + ++ LISGL K+GK +E M+L + M K C N+ Y V+ GL + E
Sbjct: 338 RGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDE 397
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGL 348
A E++ M R P+ +Y L+ G
Sbjct: 398 ALEVLSEMTNNRCKPNAYTYSSLMKGF 424
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 158/343 (46%), Gaps = 47/343 (13%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P+ + ++IN L + + ++ + + K C ++ YN + I+G + G++ KA
Sbjct: 237 PSPVTFNVLINGLCKKGDLARVAKLVDNMFL-KGCAPNE-VTYNTL-IHGLCLKGKLEKA 293
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLV---------------------------SAKLYG 180
I L M S C P+V T+ ++N LV SA + G
Sbjct: 294 ISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISG 353
Query: 181 EI-QGIYTSAAKLGVE--IDACCLNIL-----LKGLCENGNLEAAFYVLDEFPKQNCEPN 232
+G A +L E + C LN + + GLC +G + A VL E C+PN
Sbjct: 354 LFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPN 413
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TYS+LM G E GN +A + + M + V +++LI GL K GKV+E M +
Sbjct: 414 AYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWA 473
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER--MSPSFVSYKKLIHGLCN 350
+M GKGC P+ +Y ++ GL + +A +L M+C+ P V+Y L++ LC
Sbjct: 474 QMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCK 533
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRV 393
Q + +L M+ +G P ++V C+ F + R ++
Sbjct: 534 QSSISRAIDLLNSMLDRGCDP------DLVTCIIFLRTLREKL 570
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 148/291 (50%), Gaps = 17/291 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
PN Y +++ L +A+R +M+ + CR G NV+ YG + G
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMT----CR---GCTPNVVT-YGTLIDGLCKVG 232
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A L DM P + +N+++N L A E + A G++ D +
Sbjct: 233 RVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYS 292
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++ GLC + L+ A +L + C P+V YSTL+ GLC+ G V+EAF L E M +
Sbjct: 293 SVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGD 352
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G DAD VT++ LI GL K G+V+E LL RM G P++ +Y ++ GL D EA
Sbjct: 353 GCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEA 412
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVED--VDWVLKKMVQQGFVP 371
ELV M +PS V+Y LIHG+C + V+ +D+ ++M+ G +P
Sbjct: 413 IELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDY-FQEMIDNGVIP 462
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 120/237 (50%), Gaps = 6/237 (2%)
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A E M S C PS+ T+N +L+ L ++ D NIL+
Sbjct: 28 RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSH-DVISFNILV 86
Query: 206 KGLCENGNLEAAFYVLDEFPKQN--CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
GLC G +E A L+ F K + C PNV TYS L+ GLC+ V +A LLE M++ G
Sbjct: 87 TGLCRAGKIETA---LEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARG 143
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D +T+ IL+ GL K+ KV ++L M GC PN +Y +L+GL +R +A
Sbjct: 144 CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDAL 203
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ M C +P+ V+Y LI GLC V+D +L M+ +G P + ++ ++
Sbjct: 204 ALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLI 260
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 142/293 (48%), Gaps = 2/293 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y+++I+ L +A R ++++ +K D Y ++ +++ A
Sbjct: 110 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGC--SPDVITYTILVDGLCKESKVAAA 167
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L +M C P++ T+N +L+ L A+ + + G + L+ G
Sbjct: 168 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 227
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G ++ A +L + + P++ Y+ L++GLC+ V+E+ LL R S GI D
Sbjct: 228 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 287
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT++ +I GL + +++E +LL +K +GC P+ Y ++ GL + EA +L
Sbjct: 288 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 347
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + V+Y LI GLC V++ +L +MV+ G P + ++
Sbjct: 348 VMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLI 400
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 144/303 (47%), Gaps = 4/303 (1%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L ++ K + +P+ Y +++ L + + + + Q + R D +N++
Sbjct: 32 LFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDR---RSHDVISFNILVTG 88
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
AG+I A+E M C P+V T++++++ L A + + S G D
Sbjct: 89 LCRAGKIETALEFFRKMDD-RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPD 147
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
IL+ GLC+ + AA+ VL E C PN+ TY++L+HGLC V +A L+
Sbjct: 148 VITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMR 207
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M G + VT+ LI GL K G+V++ +L M KG P+ Y ++ GL
Sbjct: 208 DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 267
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+ E+ L+ R + + P V+Y +I+GLC +++ +L + +G P + ++
Sbjct: 268 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 327
Query: 378 EIV 380
++
Sbjct: 328 TLI 330
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 2/188 (1%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G E + N L+ GLC+N + A + + C P++ TY+TL+ GL G +E A
Sbjct: 5 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L + M D ++FNIL++GL + GK+E ++ +M + C PN +Y ++ G
Sbjct: 65 MALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDG 122
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L R +A EL+ M SP ++Y L+ GLC + V VL++M+ G VP
Sbjct: 123 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 182
Query: 373 MGMWREIV 380
+ + ++
Sbjct: 183 LVTYNSLL 190
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 3/199 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ +I L ++ R D ++ +K + C D Y+ + AG++ +A
Sbjct: 286 PDVVTYSSVIYGLCRSNRLDEACRLLLYVK-SRGCP-PDVILYSTLIDGLCKAGKVDEAF 343
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M C V T++ +++ L A E + ++G N L+KGL
Sbjct: 344 DLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA-FGLLERMESEGIDAD 267
C+ +L+ A +++E + NC P+ TY+ L+HG+C V+ A + M G+ D
Sbjct: 404 CDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPD 463
Query: 268 TVTFNILISGLRKQGKVEE 286
+T++IL+ GL+K + E
Sbjct: 464 HITYSILLEGLKKSKDLHE 482
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G + + VT+N LI GL K + + +L E MK C P+ +Y +L GL +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A L M+ +R S +S+ L+ GLC +E +KM
Sbjct: 61 LERAMALFQEML-DRRSHDVISFNILVTGLCRAGKIETALEFFRKM 105
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 164/313 (52%), Gaps = 3/313 (0%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
++DP +++ Y + K + + Y+ +I KLA+++RF+A+E I+ ++ + R ++
Sbjct: 59 VKDPCEALALFENYHE-KGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNI-RCNE 116
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F +I+ YG A + K IE MPS+NC+ ++++FN++LN LV + + I+
Sbjct: 117 TLFVALIQHYGK-AHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQ 175
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
A ++ ++ NI++KG + G E A + DE ++ +P+V TY++ + LC KG
Sbjct: 176 QAYEMDFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKG 235
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ A L + M +G + VT+ +L+ G GK +E KL+ M+ GC +Y
Sbjct: 236 EMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYG 295
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ L E + L+ M R+ P V+Y L++ LC + V D VL KM
Sbjct: 296 VLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVG 355
Query: 368 GFVPRMGMWREIV 380
G P +R ++
Sbjct: 356 GCDPNAATYRMMI 368
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%)
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A + + + ++ + + +YS+L++ L E +L + + I + F LI
Sbjct: 65 ALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQ 124
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
K VE+G++L +M C+ S+ +L L+D +F +A E+ + P
Sbjct: 125 HYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFRP 184
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ VSY +I G + E + +M+++G P + + +G
Sbjct: 185 NSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLG 229
>gi|147858028|emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
Length = 1051
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 170/322 (52%), Gaps = 9/322 (2%)
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIE---DIMQRIK 118
L +++DP +S+ NQY ++ + + Y+ ++ KLA+++ F+A+E D +Q I
Sbjct: 385 LADLKSVQDPDDALSLFNQY-QQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNIN 443
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+ CR + F +I+ YG + KAIE MPS+NC ++ +FN +LN+LV
Sbjct: 444 IR--CR--ETLFIALIQHYGK-SQMPEKAIELFQRMPSFNCHRTIVSFNTLLNVLVEIDR 498
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ + GI+ + K+G ++ NI++KG G + A+ V +E + +P V T+++
Sbjct: 499 FLDAIGIFDRSTKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNS 558
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+ LC KG+++ A GLLZ M + + VT+ +L+ GL GK +E K++ M +G
Sbjct: 559 LIGFLCGKGDLDGAMGLLZDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQG 618
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C P ++ ++ L + R + K L+ M R P V+Y LI+ LC + +
Sbjct: 619 CKPRLLNFGVLMSDLGRRGRIDDXKTLLLEMKRRRFKPDVVTYNILINXLCKEGRAXEAY 678
Query: 359 WVLKKMVQQGFVPRMGMWREIV 380
VL +M G P +R +V
Sbjct: 679 KVLVEMQVGGCEPNAATYRMMV 700
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 131/298 (43%), Gaps = 3/298 (1%)
Query: 52 HKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIE 111
H+ +S +L + + + I + ++ S + + N + +II +D
Sbjct: 480 HRTIVSFNTLLNVLVEIDRFLDAIGIFDR-STKMGFRRNSISFNIIIKGWLGKGEWDKAW 538
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+ + + ++K + + F ++I G + A+ L DM P+ T+ L++
Sbjct: 539 QVFEEM-IDKEVKPTVVTFNSLIGFLCG-KGDLDGAMGLLZDMIQKRHRPNAVTYALLME 596
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L S Y E + + G + +L+ L G ++ +L E ++ +P
Sbjct: 597 GLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDXKTLLLEMKRRRFKP 656
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+V TY+ L++ LC++G EA+ +L M+ G + + T+ +++ G + E G+K+L
Sbjct: 657 DVVTYNILINXLCKEGRAXEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVL 716
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
M G P S+ +++ GLL + A ++ M +M +++ L+ C
Sbjct: 717 SAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDAC 774
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 155/290 (53%), Gaps = 14/290 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y +A + +I A ++ F I ++ R+K E ++ F + K G A +
Sbjct: 85 YKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRV-LTETIFILIFKACGK-AHLPGE 142
Query: 147 AIETLFDMPS-YNCWPSVKTFNLVLNLLV-------SAKLYGEIQGIYTSAAKLGVEIDA 198
A+ M + +C +VK+FN VLN+++ + K Y + G A G + +
Sbjct: 143 AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFG----ANSKGFQPNL 198
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N+++K LC+ G ++ A E P +NC P+V TYSTLM+GLC++ V+EA LL+
Sbjct: 199 LTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDE 258
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M++EG + VTFN+LI L K G + KL++ M KGC PN +Y +++GL K +
Sbjct: 259 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 318
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+A L+ +M+ + P+ V+Y +I+GL Q+ ED +L M ++G
Sbjct: 319 LDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERG 368
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 128/241 (53%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN+I G+I +A++T +MP NC P V T++ ++N L + E +
Sbjct: 201 YNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 260
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G + N+L+ L +NG+L A ++D + C PN TY+TL+HGLC KG ++
Sbjct: 261 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 320
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A LLE+M S + VT+ +I+GL KQ + E+G+ +L M+ +G N Y ++
Sbjct: 321 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 380
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
GL + + A L M + P+ V Y I GLC + ++ + +L++M+ +GF+
Sbjct: 381 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 440
Query: 371 P 371
P
Sbjct: 441 P 441
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 139/290 (47%), Gaps = 16/290 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + PN Y LII L + + D D + + + K C D F Y+ + R+
Sbjct: 192 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPL-KNCN-PDVFTYSTLMNGLCKERRV 249
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-------GVEID 197
+A+ L +M + C P+ TFN++++ L G + AAKL G +
Sbjct: 250 DEAVFLLDEMQAEGCLPNPVTFNVLIDALSK-------NGDLSRAAKLVDNMFLKGCVPN 302
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+ GLC G L+ A +L++ C PN TY T+++GL ++ E+ +L
Sbjct: 303 EVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILM 362
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
ME G A+ ++ LISGL K+GK E ++L + M KGC PN Y + GL +
Sbjct: 363 SMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDE 422
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ EA++++ M+ + P+ +Y L+ G + + V K+M+ Q
Sbjct: 423 KPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQ 472
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 137/312 (43%), Gaps = 38/312 (12%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE-----------------------K 121
K+ NP+ Y+ ++N L + +R D ++ ++ E +
Sbjct: 227 KNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSR 286
Query: 122 LCRFSDGFF----------YNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
+ D F YN + I+G + G++ KA+ L M S C P+ T+ ++
Sbjct: 287 AAKLVDNMFLKGCVPNEVTYNTL-IHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTII 345
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
N LV + + I S + G + + + L+ GL + G E A + E ++ C+
Sbjct: 346 NGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCK 405
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PNV Y + GLC +EA +L+ M S+G + T++ L+ G K+G ++ + +
Sbjct: 406 PNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILV 465
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+ M + N +L GL + R EA + M+ E + P V+Y +I GLC+
Sbjct: 466 WKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCD 525
Query: 351 QKLVEDVDWVLK 362
V VD LK
Sbjct: 526 ---VGSVDKGLK 534
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 28/280 (10%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN +Y I+ L + ++ D EDI+Q + S GF N M G
Sbjct: 402 KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM-------LSKGFLPNAFTYSSLMKGFF 454
Query: 145 -----SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
KAI +M S + +V +++LN L + E ++T G++ D
Sbjct: 455 KKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVV 514
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQ--NCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+ ++KGLC+ G+++ + E Q P+V TY+ L + LC + N+ A LL
Sbjct: 515 AYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLN 574
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M EG D D++T NI + LR++ + +L E++ LL ++
Sbjct: 575 SMLDEGCDPDSLTCNIFLETLRERINPPQDGRLF--------------LDELVVRLLKRE 620
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
R A +V M+ + P ++ ++I C K + +
Sbjct: 621 RKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 660
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 4/250 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN+ Y IIN L + +R A + + + +E+ + ++ + Y+ + G+ A+
Sbjct: 336 PNQVTYGTIINGLVKQRR--AEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 393
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M C P+V + ++ L + E + I G +A + L+KG
Sbjct: 394 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF 453
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G+ + A V E Q+ NV S L++GLCE G + EA + M EG+ D
Sbjct: 454 FKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDV 513
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGK--GCYPNSASYQEVLYGLLDKKRFPEAKELV 326
V ++ +I GL G V++G+KL M+ + P+ +Y + L + A +L+
Sbjct: 514 VAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLL 573
Query: 327 GRMICERMSP 336
M+ E P
Sbjct: 574 NSMLDEGCDP 583
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 155/290 (53%), Gaps = 14/290 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y +A + +I A ++ F I ++ R+K E ++ F + K G A +
Sbjct: 61 YKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRV-LTETIFILIFKACGK-AHLPGE 118
Query: 147 AIETLFDMPS-YNCWPSVKTFNLVLNLLV-------SAKLYGEIQGIYTSAAKLGVEIDA 198
A+ M + +C +VK+FN VLN+++ + K Y + G A G + +
Sbjct: 119 AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFG----ANSKGFQPNL 174
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N+++K LC+ G ++ A E P +NC P+V TYSTLM+GLC++ V+EA LL+
Sbjct: 175 LTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDE 234
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M++EG + VTFN+LI L K G + KL++ M KGC PN +Y +++GL K +
Sbjct: 235 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 294
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+A L+ +M+ + P+ V+Y +I+GL Q+ ED +L M ++G
Sbjct: 295 LDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERG 344
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 128/241 (53%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN+I G+I +A++T +MP NC P V T++ ++N L + E +
Sbjct: 177 YNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 236
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G + N+L+ L +NG+L A ++D + C PN TY+TL+HGLC KG ++
Sbjct: 237 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 296
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A LLE+M S + VT+ +I+GL KQ + E+G+ +L M+ +G N Y ++
Sbjct: 297 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 356
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
GL + + A L M + P+ V Y I GLC + ++ + +L++M+ +GF+
Sbjct: 357 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 416
Query: 371 P 371
P
Sbjct: 417 P 417
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 139/290 (47%), Gaps = 16/290 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + PN Y LII L + + D D + + + K C D F Y+ + R+
Sbjct: 168 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPL-KNCN-PDVFTYSTLMNGLCKERRV 225
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-------GVEID 197
+A+ L +M + C P+ TFN++++ L G + AAKL G +
Sbjct: 226 DEAVFLLDEMQAEGCLPNPVTFNVLIDALSK-------NGDLSRAAKLVDNMFLKGCVPN 278
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+ GLC G L+ A +L++ C PN TY T+++GL ++ E+ +L
Sbjct: 279 EVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILM 338
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
ME G A+ ++ LISGL K+GK E ++L + M KGC PN Y + GL +
Sbjct: 339 SMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDE 398
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ EA++++ M+ + P+ +Y L+ G + + V K+M+ Q
Sbjct: 399 KPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQ 448
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 137/312 (43%), Gaps = 38/312 (12%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE-----------------------K 121
K+ NP+ Y+ ++N L + +R D ++ ++ E +
Sbjct: 203 KNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSR 262
Query: 122 LCRFSDGFF----------YNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
+ D F YN + I+G + G++ KA+ L M S C P+ T+ ++
Sbjct: 263 AAKLVDNMFLKGCVPNEVTYNTL-IHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTII 321
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
N LV + + I S + G + + + L+ GL + G E A + E ++ C+
Sbjct: 322 NGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCK 381
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PNV Y + GLC +EA +L+ M S+G + T++ L+ G K+G ++ + +
Sbjct: 382 PNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILV 441
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+ M + N +L GL + R EA + M+ E + P V+Y +I GLC+
Sbjct: 442 WKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCD 501
Query: 351 QKLVEDVDWVLK 362
V VD LK
Sbjct: 502 ---VGSVDKGLK 510
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 28/280 (10%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN +Y I+ L + ++ D EDI+Q + S GF N M G
Sbjct: 378 KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM-------LSKGFLPNAFTYSSLMKGFF 430
Query: 145 -----SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
KAI +M S + +V +++LN L + E ++T G++ D
Sbjct: 431 KKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVV 490
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQN--CEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+ ++KGLC+ G+++ + E Q P+V TY+ L + LC + N+ A LL
Sbjct: 491 AYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLN 550
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M EG D D++T NI + LR++ + +L E++ LL ++
Sbjct: 551 SMLDEGCDPDSLTCNIFLETLRERINPPQDGRLF--------------LDELVVRLLKRE 596
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
R A +V M+ + P ++ ++I C K + +
Sbjct: 597 RKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 636
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 4/250 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN+ Y IIN L + +R A + + + +E+ + ++ + Y+ + G+ A+
Sbjct: 312 PNQVTYGTIINGLVKQRR--AEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 369
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M C P+V + ++ L + E + I G +A + L+KG
Sbjct: 370 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF 429
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G+ + A V E Q+ NV S L++GLCE G + EA + M EG+ D
Sbjct: 430 FKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDV 489
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGK--GCYPNSASYQEVLYGLLDKKRFPEAKELV 326
V ++ +I GL G V++G+KL M+ + P+ +Y + L + A +L+
Sbjct: 490 VAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLL 549
Query: 327 GRMICERMSP 336
M+ E P
Sbjct: 550 NSMLDEGCDP 559
>gi|297746144|emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 173/325 (53%), Gaps = 15/325 (4%)
Query: 62 LKIFSNLRDPISVISVLNQYSK---RKDYNPNEALYTLIINKLAQAKRFDAIE---DIMQ 115
L +++DP +S+ NQY + + DY P+ Y+ ++ KLA+++ F+A+E D +Q
Sbjct: 456 LADLKSVQDPDDALSLFNQYQQMGFKHDY-PS---YSALVYKLARSRNFEAVETLLDYLQ 511
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
I + CR + F +I+ YG + KA+E MPS+NC ++ +FN +LN+LV
Sbjct: 512 NINIR--CR--ETLFIALIQHYGK-SQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVE 566
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ + GI+ + K+G ++ NI++KG G + A+ V +E + +P V T
Sbjct: 567 NDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVT 626
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
+++L+ LC KG+++ A GLLE M + + VT+ +L+ GL GK +E K++ M
Sbjct: 627 FNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMD 686
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+GC P ++ ++ L + R ++K L+ M R P V+Y LI+ LC +
Sbjct: 687 YQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRAL 746
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
+ VL +M G P +R +V
Sbjct: 747 EAYKVLVEMQVGGCEPNAATYRMMV 771
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A+ L DM P+ T+ L++ L S Y E + + G +
Sbjct: 638 GDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNF 697
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+L+ L G ++ + +L E ++ +P+V TY+ L++ LC++G EA+ +L M+
Sbjct: 698 GVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQV 757
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + + T+ +++ G + E G+K+L M G P S+ +++ GLL +
Sbjct: 758 GGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDG 817
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC 349
A ++ M +M +++ L+ C
Sbjct: 818 ACFVLEEMEKRKMRFHLEAWEALVKDAC 845
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 73/167 (43%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A + +++ + + + +YS L++ L N E LL+ +++ I F L
Sbjct: 466 DDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIAL 525
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I K E+ ++L +RM C+ S+ +L L++ RF +A + R
Sbjct: 526 IQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTKMGF 585
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ +S+ +I G + + V ++M+ + P + + ++G
Sbjct: 586 RRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIG 632
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 150/297 (50%), Gaps = 2/297 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ P+ YT+++ + + ++ + +K C D YNV+ GR
Sbjct: 194 RRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH-DKGCA-PDIVTYNVVLNGICQEGR 251
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+E L ++PSY C P+ ++N+VL L +A+ + + + + A G + N+
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ LC G +E A VL++ P+ C PN +Y+ L+H C++ + +A +E M S G
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRG 371
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D V++N L++ L + G+V+ ++LL ++K KGC P SY V+ GL + EA
Sbjct: 372 CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEAL 431
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL+ M + + P ++Y + GLC + +E+ K+ G P ++ I+
Sbjct: 432 ELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAIL 488
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 7/298 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISK 146
P+ +Y ++ A + DA ++ + VE D + YN + I G GR S
Sbjct: 131 GPDVMVYNAMVAGYCGAGQLDAARRLVADMPVE-----PDAYTYNTL-IRGLCGRGRTSN 184
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ L DM C P V T+ ++L Y + + G D N++L
Sbjct: 185 ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLN 244
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G+C+ G +E A L P CEPN +Y+ ++ GL E+A L+E M +G
Sbjct: 245 GICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP 304
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ VTFN+LIS L ++G VE M++LE+M GC PNS SY +L+ +K+ +A E V
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV 364
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
M+ P VSY L+ LC V+ +L ++ +G P + + ++ +T
Sbjct: 365 ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLT 422
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 140/282 (49%), Gaps = 2/282 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ L A+R++ E +M+ + K C + +N++ + G + A+
Sbjct: 269 PNTVSYNIVLKGLFTAERWEDAEKLMEEM-AHKGCP-PNVVTFNMLISFLCRRGLVEPAM 326
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L MP Y C P+ ++N +L+ K + G D N LL L
Sbjct: 327 EVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTAL 386
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C NG ++ A +L + + C P + +Y+T++ GL + G +EA LL+ M S+G+ D
Sbjct: 387 CRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDI 446
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ + SGL ++ ++EE ++ +++ G P +A Y +L GL ++ A +L
Sbjct: 447 ITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAY 506
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
MI P+ +Y L+ GL + LV++ + ++ +G V
Sbjct: 507 MISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548
>gi|225435096|ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Vitis vinifera]
Length = 501
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 171/322 (53%), Gaps = 9/322 (2%)
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIE---DIMQRIK 118
L +++DP +S+ NQY ++ + + Y+ ++ KLA+++ F+A+E D +Q I
Sbjct: 94 LADLKSVQDPDDALSLFNQY-QQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNIN 152
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+ CR + F +I+ YG + KA+E MPS+NC ++ +FN +LN+LV
Sbjct: 153 IR--CR--ETLFIALIQHYGK-SQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDR 207
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ + GI+ + K+G ++ NI++KG G + A+ V +E + +P V T+++
Sbjct: 208 FLDAIGIFDRSTKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNS 267
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+ LC KG+++ A GLLE M + + VT+ +L+ GL GK +E K++ M +G
Sbjct: 268 LIGFLCGKGDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQG 327
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C P ++ ++ L + R ++K L+ M R P V+Y LI+ LC + +
Sbjct: 328 CKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAY 387
Query: 359 WVLKKMVQQGFVPRMGMWREIV 380
VL +M G P +R +V
Sbjct: 388 KVLVEMQVGGCEPNAATYRMMV 409
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A+ L DM P+ T+ L++ L S Y E + + G +
Sbjct: 276 GDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNF 335
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+L+ L G ++ + +L E ++ +P+V TY+ L++ LC++G EA+ +L M+
Sbjct: 336 GVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQV 395
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + + T+ +++ G + E G+K+L M G P S+ +++ GLL +
Sbjct: 396 GGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDG 455
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC 349
A ++ M +M +++ L+ C
Sbjct: 456 ACFVLEEMEKRKMRFHLEAWEALVKDAC 483
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 73/167 (43%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A + +++ + + + +YS L++ L N E LL+ +++ I F L
Sbjct: 104 DDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIAL 163
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I K E+ ++L +RM C+ S+ +L L++ RF +A + R
Sbjct: 164 IQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTKMGF 223
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ +S+ +I G + + V ++M+ + P + + ++G
Sbjct: 224 RRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIG 270
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 158/307 (51%), Gaps = 8/307 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L PIS + K + ++ + +I A + FD++E ++ RI++E
Sbjct: 55 LEAPISE-KMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIER 113
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
F V + YG A KA++ M + C SVK+FN VLN++++ LY Y
Sbjct: 114 SFIV-VFRAYGK-AHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY 171
Query: 187 ----TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
S + + + N+++K LC+ ++ A V P++ C P+ TY TLM G
Sbjct: 172 DYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDG 231
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC++ ++EA LL+ M+SEG V +N+LI GL K+G + KL++ M KGC PN
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN 291
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+Y +++GL K + +A L+ RM+ + P+ V+Y LI+GL Q+ D +L
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLS 351
Query: 363 KMVQQGF 369
M ++G+
Sbjct: 352 SMEERGY 358
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 137/283 (48%), Gaps = 2/283 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
+ +PN + L+I L + + D ++ + + E+ C DG+ Y + RI
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMP-ERKC-LPDGYTYCTLMDGLCKEERID 239
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A+ L +M S C PS +N++++ L + + + G + N L+
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC G L+ A +L+ C PN TY TL++GL ++ +A LL ME G
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ +++LISGL K+GK EE M L +M KGC PN Y ++ GL + + EAKE+
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ RMI P+ +Y L+ G L E+ V K+M + G
Sbjct: 420 LNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +AIE MP C P T+ +++ L + E + G N+
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+ G+L ++D + C PN TY+TL+HGLC KG +++A LLERM S
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+ LI+GL KQ + + ++LL M+ +G + N Y ++ GL + + EA
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L +M + P+ V Y L+ GLC + + +L +M+ G +P
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 131/263 (49%), Gaps = 4/263 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISK 146
+P+ +Y ++I+ L + + ++ + + K C + YN + I+G + G++ K
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL-KGC-VPNEVTYNTL-IHGLCLKGKLDK 310
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ L M S C P+ T+ ++N LV + + + +S + G ++ ++L+
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GL + G E A + + ++ C+PN+ YS L+ GLC +G EA +L RM + G
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T++ L+ G K G EE +++ + M GC N Y ++ GL R EA +
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 327 GRMICERMSPSFVSYKKLIHGLC 349
+M+ + P V+Y +I GLC
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLC 513
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 136/300 (45%), Gaps = 11/300 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PNE Y +I+ L + D +++R+ V C +D + +I R + A+
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERM-VSSKCIPNDVTYGTLINGLVKQR-RATDAV 347
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M + ++++++ L E ++ A+ G + + ++L+ GL
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G A +L+ C PN TYS+LM G + G EEA + + M+ G +
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+++LI GL G+V+E M + +M G P++ +Y ++ GL A +L
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Query: 329 MICE---RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
M+C+ + P V+Y L+ GLC QK + +L M+ +G P +++ C TF
Sbjct: 528 MLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDP------DVITCNTF 581
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 126/273 (46%), Gaps = 23/273 (8%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN +Y+++++ L + + + ++I+ R+ + C + + Y+ + G
Sbjct: 391 KGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM-IASGC-LPNAYTYSSLMKGFFKTGLC 448
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A++ +M C + ++++++ L E +++ +G++ D + +
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 205 LKGLCENGNLEAAFYVLDEF-----PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+KGLC G+++AA + E PK +P+V TY+ L+ GLC + ++ A LL M
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKS--QPDVVTYNILLDGLCMQKDISRAVDLLNSM 566
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G D D +T N ++ L + K C + +E++ LL ++R
Sbjct: 567 LDRGCDPDVITCNTFLNTLSE--------------KSNSCDKGRSFLEELVVRLLKRQRV 612
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
A +V M+ + ++P ++ ++ +C K
Sbjct: 613 SGACTIVEVMLGKYLAPKTSTWAMIVREICKPK 645
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 174/354 (49%), Gaps = 9/354 (2%)
Query: 29 RTFALASPSAS--HQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKD 86
RT P A H+ H N D + RDP+ +++ ++Y +R
Sbjct: 4 RTLPFNKPKAKPRHRRKGHKTSSRNRND----APFVNHVKEARDPVEALTLFHEYLQR-G 58
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ Y ++ KLA+ + F A+E++++ ++ +K + F + + YG A + K
Sbjct: 59 FKPDYPSYAALLYKLARCQDFGAVEEVLRYVE-DKNVHCQETIFIALFQHYGK-AQLVHK 116
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+E M +NC + ++ N +LN+LV + E ++ ++G +++ N+++K
Sbjct: 117 AVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNSVAFNVMIK 176
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G E G E A V DE ++ EP+V TY++L+ LC G +++A GLLE M +G
Sbjct: 177 GWLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKRP 236
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ +TF +L+ G G+ E K++ M+ +GC P ++ ++ L + + EAK ++
Sbjct: 237 NAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVL 296
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M M P V+Y LI+ LC + D VL +M G +R +V
Sbjct: 297 HEMKKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLV 350
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ G ++A + +FDM C P+V F ++++ L E + + K ++ D
Sbjct: 250 LIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVLHEMKKRHMKPDVV 309
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NIL+ LC+ G A+ VL E CE N TY L+ G C G+ E +L M
Sbjct: 310 TYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVDGFCRVGDFEGGLKVLNAM 369
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
+ G TF L+ GL K G ++ +LE M+ +
Sbjct: 370 LTSGHFPRVETFRSLVVGLVKSGNLDGACFVLEEMEKR 407
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 183/407 (44%), Gaps = 82/407 (20%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
++S + + DP + + N+ ++++ ++ N A Y I++KLA++K+F AI+ ++
Sbjct: 127 FISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVL 186
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMA--------------------------------- 141
++ E C+F +G F N++K + ++
Sbjct: 187 HQMTYET-CKFHEGIFLNLMKHFSKLSLHERVVEMFDAIXPIVREKPSLKAISTCLNLLV 245
Query: 142 -----------GRISKAIETLFDM-PSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTS 188
G I A E + +M S+ +P++ T++ ++N L S +L I+
Sbjct: 246 ESNQSSITAKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEM 305
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+K + DA N L+ G C ++ A +++ K C PNV YS LM+G C++G
Sbjct: 306 VSKDQILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGR 365
Query: 249 VEEAFGLLERMESEGID-----------------------------------ADTVTFNI 273
+EEA + + M+S G+ ADTVTFN+
Sbjct: 366 LEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNV 425
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
++ GL ++G+ EE +LER+ +G Y N ASY+ VL L + +A +LVG M+
Sbjct: 426 ILGGLCREGRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRG 485
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P F + +L+ LC V D L +++ GF P W +V
Sbjct: 486 VLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLV 532
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 145/300 (48%), Gaps = 5/300 (1%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDG 128
D S V+ + K PN Y+ +IN L + R +AIE + + +++ D
Sbjct: 258 DIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQI--LPDA 315
Query: 129 FFYNVIKIYGNMAG-RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
YN + I G G ++ +A++ + M C P+V ++ ++N E + ++
Sbjct: 316 LTYNAL-INGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFD 374
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
LG++ D L+ C G ++ A +L + + C + T++ ++ GLC +G
Sbjct: 375 EMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREG 434
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
EEA G+LER+ EG+ + ++ I+++ L ++G++++ +L+ M G+G P+ A+
Sbjct: 435 RFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSN 494
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
E+L L + + +A + ++ P S+ L+ +C ++ + +L +V Q
Sbjct: 495 ELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLVIQ 554
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 176/362 (48%), Gaps = 35/362 (9%)
Query: 52 HKDWLSPTEVLKIFSNLRDPISVISVLNQY---SKRKDYNPNEALYTLIINKLAQAKRFD 108
+++ +P + + LR ++ N + + K + + Y ++I KL + D
Sbjct: 37 YQEIKTPIKESDVVMRLRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVD 96
Query: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL 168
++ ++Q++K+E + S+ F NVI Y G +A++ + + + C P+VK +N
Sbjct: 97 GVQYLLQQMKLEGI-SCSEDLFINVINTY-RRVGLAEQALKMFYRIREFGCQPTVKIYNH 154
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
+L+ ++S + I+ IY++ + G E + NILLK LC+N ++ A +L E +
Sbjct: 155 LLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKG 214
Query: 229 CEPNVRTYST------------------------------LMHGLCEKGNVEEAFGLLER 258
CEP+V +Y+T L++G C + V+E F LL +
Sbjct: 215 CEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQ 274
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M +GID + +T++ +IS L G VE + + +M +GC PN ++ ++ G + R
Sbjct: 275 MVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGR 334
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
EA + RM E P+ V+Y LIHGLC+ + + V KM + G P + +
Sbjct: 335 VLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGA 394
Query: 379 IV 380
++
Sbjct: 395 LI 396
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 139/288 (48%), Gaps = 2/288 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
K +PN Y+ +I+ L+ + + ++ V C + F +++K Y M GR
Sbjct: 277 EKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRG-CSPNVYTFTSLMKGYF-MRGR 334
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+ M P+V +N +++ L S GE + + + G +
Sbjct: 335 VLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGA 394
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G + G+L A + ++ C PNV Y+++++ LC +A+ L+E+M ++
Sbjct: 395 LIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDN 454
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+TVTFN I GL G+VE + L +M+ GC PN +Y EVL GLL + R EA
Sbjct: 455 CPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEAL 514
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
ELV M + M + V+Y + G CN E+ +L KM+ G P
Sbjct: 515 ELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKP 562
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 150/316 (47%), Gaps = 17/316 (5%)
Query: 74 VISVLNQYSKRKD--YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
V+ LN +++ + + PN Y +I+ L + E + K+E+ +G
Sbjct: 335 VLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMG--EAVSVSSKMER-----NGCSP 387
Query: 132 NVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
NV YG + AG + A E M + C P+V + ++N+L + ++ + +
Sbjct: 388 NV-STYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSL 446
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ + N +KGLC +G +E A + + + C PN++TY+ ++ GL +
Sbjct: 447 IEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLK 506
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+ ++EA L+ ME +G++ + VT+N + G GK EE +KLL +M G P++ +
Sbjct: 507 ENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAIT 566
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMIC-ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
Y + Y + + A +L+ ++ + P +Y L+ G+CNQ VE+ L KM
Sbjct: 567 YNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKM 626
Query: 365 VQQGFVPRMGMWREIV 380
+ +G W +V
Sbjct: 627 LNEGICLNAATWNALV 642
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 135/305 (44%), Gaps = 25/305 (8%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--VEKLCRFSDGFF--YNVIKIYGNM 140
K P+ YT +I+ +++ + + ++ R + V +GF Y V +++ +
Sbjct: 213 KGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLL 272
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ K I+ P+V T++ V++ L G ++ AK+ V C
Sbjct: 273 GQMVEKGID-----------PNVITYSTVISSLSGI---GNVELALAVWAKMFVR--GCS 316
Query: 201 LNI-----LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
N+ L+KG G + A + + ++ EPNV Y+TL+HGLC G + EA +
Sbjct: 317 PNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSV 376
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+ME G + T+ LI G K G + ++ +M GC PN Y ++ L
Sbjct: 377 SSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCR 436
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
F +A L+ +M + P+ V++ I GLC VE + +M Q G P +
Sbjct: 437 SSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKT 496
Query: 376 WREIV 380
+ E++
Sbjct: 497 YNEVL 501
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 133/276 (48%), Gaps = 17/276 (6%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-- 140
+R +PN + Y +I+ A+A +I ++ ++G NV+ +Y +M
Sbjct: 381 ERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKM-------MTNGCIPNVV-VYTSMVN 432
Query: 141 ----AGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
+ S+A + M + NC P+ TFN + L S ++ I ++ + G
Sbjct: 433 VLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAIN-LFCQMEQYGCS 491
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+ N +L GL + ++ A ++ E ++ E N+ TY+T+ G C G EEA L
Sbjct: 492 PNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKL 551
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY-PNSASYQEVLYGLL 314
L +M G+ D +T+N L QGKV+ ++LL+++ G + P A+Y +L+G+
Sbjct: 552 LGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGIC 611
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
++ EA + +M+ E + + ++ L+ GL N
Sbjct: 612 NQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFN 647
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 162/313 (51%), Gaps = 8/313 (2%)
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK 121
+++ + L PIS + K + ++ + +I A F ++E ++ RI++E
Sbjct: 49 MEVETPLEAPISE-QMFKSAPKMGSFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLEN 107
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYG 180
F V + YG A KA++ M + C SVK+FN VLN++++ LY
Sbjct: 108 RVIIERSFIV-VFRAYGK-AHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYH 165
Query: 181 EIQGIY----TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
Y S + + + N+++K LC+ G ++ A V P++ C P+ TY
Sbjct: 166 RGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTY 225
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
TLM GLC++ ++EA LL+ M+SEG V +N+LI GL K+G + KL++ M
Sbjct: 226 CTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFL 285
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
KGC+PN +Y +++GL K + +A L+ RM+ + P+ V+Y LI+GL Q+ D
Sbjct: 286 KGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMD 345
Query: 357 VDWVLKKMVQQGF 369
+L M ++G+
Sbjct: 346 GARLLISMEERGY 358
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 2/283 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
+ +PN + L+I L + D ++ + + EK C DG+ Y + RI
Sbjct: 182 NISPNGLSFNLVIKALCKLGFVDRAIEVFRGMP-EKKC-LPDGYTYCTLMDGLCKEERID 239
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A+ L +M S C PS +N++++ L + + + G + N L+
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLI 299
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC G L+ A +L+ C PN TY TL++GL ++ + LL ME G
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYR 359
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ +++LISGL K+GK EE M L ++M KGC PN Y V+ GL + + EAKE+
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEI 419
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ MI P+ +Y L+ G L E+ V ++M + G
Sbjct: 420 LNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETG 462
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 119/245 (48%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+G +N++ G + +AIE MP C P T+ +++ L + E +
Sbjct: 186 NGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
G N+L+ GLC+ G+L ++D + C PN TY+TL+HGLC K
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLK 305
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G +++A LLERM S + VT+ LI+GL KQ + +G +LL M+ +G N Y
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIY 365
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL + + EA L +M + P+ V Y +I GLC + + +L M+
Sbjct: 366 SVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMIS 425
Query: 367 QGFVP 371
G +P
Sbjct: 426 SGCLP 430
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 4/263 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISK 146
+P+ +Y ++I+ L + + ++ + + K C F + YN + I+G + G++ K
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFL-KGC-FPNEVTYNTL-IHGLCLKGKLDK 310
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ L M S C P+ T+ ++N LV + + + S + G ++ ++L+
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLIS 370
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GL + G E A + + ++ C PN+ YS ++ GLC +G EA +L M S G
Sbjct: 371 GLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLP 430
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T++ L+ G K G EE +++ M GC N Y ++ GL R EA +
Sbjct: 431 NVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 327 GRMICERMSPSFVSYKKLIHGLC 349
+M+ + P V+Y +I GLC
Sbjct: 491 SKMLTIGIKPDTVAYSSMIKGLC 513
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 124/279 (44%), Gaps = 35/279 (12%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN +Y+ +I+ L + + + ++I+ + S G NV M G
Sbjct: 391 KGCRPNIVVYSAVIDGLCREGKPNEAKEILNGM-------ISSGCLPNVYTYSSLMKGFF 443
Query: 145 -----SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+AI+ +M C + ++++++ L E +++ +G++ D
Sbjct: 444 KTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTV 503
Query: 200 CLNILLKGLCENGNLEAAFYVLDEF-----PKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ ++KGLC G+++AA + E PK +P+V TY+ L+ GLC + +V A
Sbjct: 504 AYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKS--QPDVVTYNILLDGLCMQKDVSRAVD 561
Query: 255 LLERMESEGIDADTVTFNILISGL-RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
LL M G D D +T N ++ L K EEG LE E++ L
Sbjct: 562 LLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLE---------------ELVARL 606
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
L ++R A ++V M+ + ++P ++ ++ +C K
Sbjct: 607 LKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPK 645
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 152/323 (47%), Gaps = 8/323 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L P V + +DP+ +S+ N K + Y +I KL FDA+E ++
Sbjct: 5 LLPKHVAAVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLM 64
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
+++ +G + + ++ YG G++ +A++ M YNC PS+ ++N ++N+LV
Sbjct: 65 EMRLNVDNSLLEGVYVSAMRNYGR-KGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVE 123
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ + +Y G+ D C I +K C AA +L+ P Q CE N
Sbjct: 124 YGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVV 183
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y T++ G E+ EA+ L +M GI TFN L+ L K+G ++EG KLL ++
Sbjct: 184 YCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVL 243
Query: 296 GKGCYPNSASYQEVLYGLLDK-------KRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
G PN ++ + GL K + EA+ + +M+ + + P +Y +I+G
Sbjct: 244 KNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGY 303
Query: 349 CNQKLVEDVDWVLKKMVQQGFVP 371
++D +LK +GFVP
Sbjct: 304 SKVGKIQDASRILKDAKFKGFVP 326
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 138/284 (48%), Gaps = 4/284 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF-SDGFFYNVIKIYGNMAGR 143
K P++ Y II ++ + I+D + +K K F D F Y + I G
Sbjct: 287 KGLEPDDFTYNTIIYGYSKVGK---IQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGD 343
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I A+ + PS+ +N ++ L L + + +K G+ D N+
Sbjct: 344 IDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNL 403
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ GLC+ G + A +L+ + P++ T++TL+ G C++ ++ A G+L+ M S G
Sbjct: 404 VINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHG 463
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D +T+N +++GL K K E+ M+ + + KGC PN +Y ++ L ++ EA
Sbjct: 464 VTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEAL 523
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+L+ + + P VS+ +I G CN +++ + ++M QQ
Sbjct: 524 DLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQ 567
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 123/279 (44%), Gaps = 38/279 (13%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + KA++ + DM P + T+NLV+N L + + +A G D
Sbjct: 377 GLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTF 436
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C+ ++ A +LD P+V TY+++++GLC+ E+ + +
Sbjct: 437 NTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIME 496
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G + +T+NILI L K KV E + LLE ++ +G P+ S+ V+ G + E
Sbjct: 497 KGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDE 556
Query: 322 AKELVGRM-----ICERMS-------------------------------PSFVSYKKLI 345
A +L RM IC ++ P +Y+ +I
Sbjct: 557 AYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMI 616
Query: 346 HGLCNQKLVED-VDWVLKKMVQQGFVPRMGMWREIVGCV 383
G C V D++LK+ ++ GFVP + + ++ C+
Sbjct: 617 DGFCKVGNVNSGYDFLLKE-IEIGFVPSLTTFGRVINCL 654
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 140/301 (46%), Gaps = 4/301 (1%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+ + ++N SK + +P+ Y L+IN L + +++ + D F +
Sbjct: 380 LKALQLMNDMSK-EGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGY--LPDIFTF 436
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + ++ AI L M S+ P V T+N +LN L A ++ + +
Sbjct: 437 NTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIME 496
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G + NIL++ LC+ + A +L+E + P+ ++ T++ G C G+++E
Sbjct: 497 KGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDE 556
Query: 252 AFGLLERMESEGIDADTV-TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A+ L RME + TV T+NI+I+ ++ ++ KL M KGC P+S +Y+ ++
Sbjct: 557 AYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMI 616
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
G + + + I PS ++ ++I+ LC Q V + ++ MV+ G V
Sbjct: 617 DGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVV 676
Query: 371 P 371
P
Sbjct: 677 P 677
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 124/250 (49%), Gaps = 10/250 (4%)
Query: 127 DGFFYNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ-- 183
D F YN I IYG + G+I A L D P T+ +L++ G+I
Sbjct: 292 DDFTYNTI-IYGYSKVGKIQDASRILKDAKFKGFVPDEFTY---CSLIIGVCQDGDIDHA 347
Query: 184 -GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
++ A G++ N L+KGL + G + A ++++ K+ P++ TY+ +++G
Sbjct: 348 LALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVING 407
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC+ G V +A LL ++G D TFN LI G K+ K++ + +L+ M G P+
Sbjct: 408 LCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPD 467
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMS-PSFVSYKKLIHGLCNQKLVEDVDWVL 361
+Y +L GL + PE +MI E+ P+ ++Y LI LC + V + +L
Sbjct: 468 VITYNSILNGLCKAAK-PEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLL 526
Query: 362 KKMVQQGFVP 371
+++ +G +P
Sbjct: 527 EEIRNRGLIP 536
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 135/290 (46%), Gaps = 5/290 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR--FSDGFFYNVIKIYGNMAGRISK 146
P+ A + +++ L + E ++ ++ +C F+ F + G + G SK
Sbjct: 214 PHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSK 273
Query: 147 AIET---LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+E L M + P T+N ++ + I A G D
Sbjct: 274 VVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCS 333
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G+C++G+++ A + +E + +P++ Y+TL+ GL ++G V +A L+ M EG
Sbjct: 334 LIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEG 393
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D T+N++I+GL K G V + LL KG P+ ++ ++ G + + A
Sbjct: 394 MSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAI 453
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
++ M ++P ++Y +++GLC EDV K ++++G +P +
Sbjct: 454 GILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNI 503
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 15/192 (7%)
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
++G+Y SA ++ G ++ A V + NCEP++ +Y+ +M+
Sbjct: 75 LEGVYVSA---------------MRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMN 119
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
L E G +A + RM+ EGI D TF I I + + ++LL M +GC
Sbjct: 120 ILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCEL 179
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N+ Y V+ G ++ EA EL +M+ + P ++ KL+H LC + +++ + +L
Sbjct: 180 NAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLL 239
Query: 362 KKMVQQGFVPRM 373
K+++ G P +
Sbjct: 240 NKVLKNGVCPNL 251
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+E D N ++ G + G ++ A +L + + P+ TY +L+ G+C+ G+++ A
Sbjct: 288 GLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHA 347
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L E +G+ V +N LI GL +QG V + ++L+ M +G P+ +Y V+ G
Sbjct: 348 LALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVING 407
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L +A L+ I + P ++ LI G C + +++ +L M G P
Sbjct: 408 LCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPD 467
Query: 373 MGMWREIV 380
+ + I+
Sbjct: 468 VITYNSIL 475
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 123/272 (45%), Gaps = 20/272 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKV--EKLCRFSDGFFYNVIKIYGNMAGRISK 146
P+ Y I+N L +A + ED+M+ K+ EK C + YN++ A ++++
Sbjct: 466 PDVITYNSILNGLCKAAK---PEDVMETFKMIMEKGC-LPNIITYNILIESLCKARKVTE 521
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC----CLN 202
A++ L ++ + P +F V++ + G++ Y ++ + C N
Sbjct: 522 ALDLLEEIRNRGLIPDPVSFGTVISGFCNN---GDLDEAYQLFRRMEQQYRICHTVATYN 578
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ E +++ A + E + C+P+ TY ++ G C+ GNV + L +
Sbjct: 579 IMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEI 638
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD-KKRFPE 321
G TF +I+ L Q +V E + ++ M G P E + + D K+
Sbjct: 639 GFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVP------EAVVTIFDADKKAVA 692
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
A +++ + ++ ++ +Y+ L G+ N+KL
Sbjct: 693 APKIIVEDLLKKSHITYYAYELLYDGIRNKKL 724
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 135/254 (53%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YNV+ GR+ A+E L ++PSY P+ ++N+VL L +A+ + + + +
Sbjct: 15 DIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLM 74
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
A G + N+L+ LC G +E A VL++ PK C PN +Y+ L+H C++
Sbjct: 75 EEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQ 134
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+++A +E M S G D V++N L++ L + G+V+ + LL ++KGKGC P SY
Sbjct: 135 KKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISY 194
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
V+ GL + EA EL+ MI + + P ++Y + GLC + +E+ K+
Sbjct: 195 NTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQD 254
Query: 367 QGFVPRMGMWREIV 380
G P + ++ I+
Sbjct: 255 MGIRPTVVLYNAIL 268
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 142/292 (48%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ L A+R++ E +M+ + K C + +N++ + G + A+
Sbjct: 49 PNTVSYNIVLKGLFTAERWEDAEKLMEEM-AHKGCP-PNVVTFNMLISFLCRRGLVEPAM 106
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +P Y C P+ ++N +L+ K + G D N LL L
Sbjct: 107 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTAL 166
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C NG ++ A +L + + C P + +Y+T++ GL + G +EA LL+ M S+G+ D
Sbjct: 167 CRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDI 226
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+ + SGL ++ K+EE ++ +++ G P Y +L GL ++ A +L
Sbjct: 227 ITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSY 286
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI P+ +Y L+ GL + LV++ +L ++ +G V + M + V
Sbjct: 287 MISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVVNKKFMKKGAV 338
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 115/232 (49%)
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ L +M C P + T+N+VLN + + + G E + NI+LKG
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L E A +++E + C PNV T++ L+ LC +G VE A +LE++ G +
Sbjct: 61 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++++N L+ KQ K+++ M +E M +GCYP+ SY +L L A +L+
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
++ + SP +SY +I GL ++ +L +M+ +G P + + I
Sbjct: 181 QLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTI 232
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 99/192 (51%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D N++L G+C+ G ++ A L+ P EPN +Y+ ++ GL E+A
Sbjct: 11 GCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDA 70
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L+E M +G + VTFN+LIS L ++G VE M++LE++ GC PNS SY +L+
Sbjct: 71 EKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHA 130
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+K+ +A V M+ P VSY L+ LC V+ +L ++ +G P
Sbjct: 131 FCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPV 190
Query: 373 MGMWREIVGCVT 384
+ + ++ +T
Sbjct: 191 LISYNTVIDGLT 202
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 165/318 (51%), Gaps = 14/318 (4%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
++S + + RDP V+ + N+ S++K +N N A Y+++++ L + K+F A++ I+
Sbjct: 53 FISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAIL 112
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY--NCWPSVKTFNLVLNL 172
++K E CRF + F N+++ + + + +F++ PS+ + LNL
Sbjct: 113 HQMKYET-CRFQESLFLNLMRHFSR--SDLHDKVMEMFNLIQVIARVKPSLNAISTCLNL 169
Query: 173 LVSAKLYGEI----QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
L+ + GE+ + + + LG++ + C NIL+K C+NG++ AF V++E +
Sbjct: 170 LIDS---GEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSG 226
Query: 229 CE-PNVRTYSTLMHGLCEKGNVEEAFGLLERMES-EGIDADTVTFNILISGLRKQGKVEE 286
PN TYSTLM L +EA L E M S EGI D VTFN++I+G + G+VE
Sbjct: 227 ISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVER 286
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
K+L+ MK GC PN +Y ++ G + EAK+ + + V Y L++
Sbjct: 287 AKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 347 GLCNQKLVEDVDWVLKKM 364
C ++ +L +M
Sbjct: 347 CFCRNGETDEAMKLLGEM 364
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 1/222 (0%)
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSA-AKLGVEIDACCLNILLKGLCENGNLEAAF 218
+P+ T++ +++ L + E ++ +K G+ D N+++ G C G +E A
Sbjct: 229 YPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAK 288
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+LD K C PNV YS LM+G C+ G ++EA + ++ G+ DTV + L++
Sbjct: 289 KILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCF 348
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
+ G+ +E MKLL MK C ++ +Y +L GL + R EA +++ + E + +
Sbjct: 349 CRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNK 408
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
SY+ +++ LC +E L M ++G P W E+V
Sbjct: 409 GSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 4/263 (1%)
Query: 143 RISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R +A+E DM S P TFN+++N A + I K G +
Sbjct: 247 RSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNY 306
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L+ G C+ G ++ A DE K + + Y+TLM+ C G +EA LL M++
Sbjct: 307 SALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKA 366
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
ADT+T+N+++ GL +G+ EE +++L++ +G + N SY+ +L L +
Sbjct: 367 SRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEK 426
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A + + M + P ++ +L+ LC E VL ++ G +P W +V
Sbjct: 427 AVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVE 486
Query: 382 CVTFGKDNRNRVYVTETVDSLAS 404
+ R V+V E +DSL S
Sbjct: 487 SIC---KERKLVHVFELLDSLVS 506
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 130/278 (46%), Gaps = 3/278 (1%)
Query: 89 PNEALYTLIINKL-AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN Y+ +++ L A ++ +A+E I E + D +NV+ AG + +A
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGIS--PDPVTFNVMINGFCRAGEVERA 287
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M C P+V ++ ++N E + + K G+++D L+
Sbjct: 288 KKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C NG + A +L E C + TY+ ++ GL +G EEA +L++ SEG+ +
Sbjct: 348 FCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLN 407
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++ I+++ L G++E+ +K L M +G +P+ A++ E++ L + ++
Sbjct: 408 KGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLI 467
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+ + P S+ ++ +C ++ + V +L +V
Sbjct: 468 GFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 152/295 (51%), Gaps = 5/295 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+ S+ Y ++ + +I A + F + + R+K E+ F + F V +
Sbjct: 66 IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRV-FIEKNFILVFRA 124
Query: 137 YGNMAGRISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA--AKLG 193
YG A KAIE M + C +V++FN VLN+++ L+ Y K
Sbjct: 125 YGK-AHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTN 183
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ + N+++K +C+ G ++ A V E Q CEP+V TY TLM GLC++ ++EA
Sbjct: 184 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 243
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
LL+ M+ EG +VTFN+LI+GL K+G + KL++ M KGC PN +Y ++ GL
Sbjct: 244 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 303
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
K + +A L+ RM+ + P+ V+Y LI+GL Q D +L + ++G
Sbjct: 304 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 138/288 (47%), Gaps = 2/288 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+ + +PN + L+I + + D ++ + + ++K C D F Y + R
Sbjct: 181 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQK-CE-PDVFTYCTLMDGLCKEDR 238
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I +A+ L +M C+PS TFN+++N L + + + G + N
Sbjct: 239 IDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 298
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ GLC G L+ A +LD C PN TY TL++GL ++G + LL +E G
Sbjct: 299 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
A+ ++ LISGL K+ K EE M L ++M KGC PN Y ++ GL + + EAK
Sbjct: 359 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 418
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E++ M+ + +P+ +Y LI G + V K+M + VP
Sbjct: 419 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVP 466
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 125/239 (52%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +AIE +M C P V T+ +++ L E + G +
Sbjct: 202 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 261
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+L+ GLC+ G++ ++D + C PN TY+T+++GLC KG +++A LL+RM +
Sbjct: 262 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 321
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ VT+ LI+GL KQG+ +G+ LL ++ +G + N +Y ++ GL +++ E
Sbjct: 322 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE 381
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A L +M+ + P+ V Y LI GLC + +++ +L +MV +G P + ++
Sbjct: 382 AMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 440
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 129/267 (48%), Gaps = 2/267 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + ++IN L + + ++ + + K C + YN I + G++ KA+
Sbjct: 256 PSSVTFNVLINGLCKKGDMVRVTKLVDNMFL-KGC-VPNEVTYNTIINGLCLKGKLDKAV 313
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M + C P+ T+ ++N LV + + +S + G + + L+ GL
Sbjct: 314 SLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGL 373
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ E A + + ++ C+PN+ YS L+ GLC +G ++EA +L M ++G +
Sbjct: 374 FKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNA 433
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T++ LI G K G ++ +++ + M C PN Y +++GL + + EA +
Sbjct: 434 FTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTH 493
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVE 355
M+ + P V+Y +IHGLCN VE
Sbjct: 494 MLGRGLRPDVVAYSSMIHGLCNAGSVE 520
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 4/287 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PNE Y IIN L + D ++ R+ K C +D + +I GR +
Sbjct: 291 PNEVTYNTIINGLCLKGKLDKAVSLLDRMVASK-CVPNDVTYGTLINGLVKQ-GRSVDGV 348
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L + + ++ +++ L + E G++ + G + + + L+ GL
Sbjct: 349 HLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGL 408
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G L+ A +L E + C PN TYS+L+ G + GN ++A + + M +
Sbjct: 409 CREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNE 468
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ +++LI GL + GK+ E M + M G+G P+ +Y +++GL + +L
Sbjct: 469 ICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNE 528
Query: 329 MICERMS--PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
M+C+ P V+Y L+ LC Q + +L M+ +G P +
Sbjct: 529 MLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDL 575
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 133/276 (48%), Gaps = 20/276 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN +Y+ +I+ L + + D ++I+ + V K C + + ++IK + G
Sbjct: 392 KGCQPNIVVYSALIDGLCREGKLDEAKEILCEM-VNKGCTPNAFTYSSLIKGFFK-TGNS 449
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KAI +M NC P+ ++++++ L E ++T G+ D + +
Sbjct: 450 QKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSM 509
Query: 205 LKGLCENGNLEAAFYVLDEFPKQ--NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+ GLC G++E + +E Q + +P+V TY+ L+ LC++ ++ A LL M
Sbjct: 510 IHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDR 569
Query: 263 GIDADTVTFNILISGLR-KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + D +T NI ++ LR K ++G + L+ E++ L ++R
Sbjct: 570 GCNPDLITCNIFLNALREKLNPPQDGREFLD---------------ELVVRLHKRQRIVG 614
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
A +++ M+ + + P+ +++++I LC K V+ +
Sbjct: 615 AAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAI 650
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 5/163 (3%)
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE--RMESEGIDADTVTFNILISG 277
++DEF C VR+++++++ + ++G A E I + ++FN++I
Sbjct: 141 MVDEF---QCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKA 197
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
+ K G V+ +++ M + C P+ +Y ++ GL + R EA L+ M E PS
Sbjct: 198 MCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPS 257
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V++ LI+GLC + + V ++ M +G VP + I+
Sbjct: 258 SVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 300
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 147/293 (50%), Gaps = 8/293 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L ++ +++ I++++ +EK C D YN + ++ +A
Sbjct: 230 PDTFSYNTVVACLCESGKYEEAGKILEKM-IEKKCG-PDVVTYNSLMDGFCKVSKMDEAE 287
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L DM C P+V T+ ++ A + + K G+ D N LL GL
Sbjct: 288 RLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGL 347
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G LE A +L+ +++C P+V TYS L++GLC+ G V++A LLE M G +
Sbjct: 348 CKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNL 407
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VTFN +I G K GKV+EG K+LE MK C P+ +Y ++ G R +A ++G
Sbjct: 408 VTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILG- 466
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+SP SY ++ GLC+ VE+ V+ M +QG P + I+G
Sbjct: 467 -----ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIG 514
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 159/341 (46%), Gaps = 6/341 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ +LK + + D + L+ + + +P Y ++I+ L Q +R D +
Sbjct: 58 DVITHNTILKAYCQIGD---LDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQL 114
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ + ++K C D YN + G+I A L M +C P V T+ ++
Sbjct: 115 LDEM-IQKDCH-PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGC 172
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
E + + + G+ D N LL GLC+ LE +L+E + EP+
Sbjct: 173 CQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDT 232
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+Y+T++ LCE G EEA +LE+M + D VT+N L+ G K K++E +LLE
Sbjct: 233 FSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLED 292
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M G+ C P +Y ++ G R +A ++ M +SP V+Y L+ GLC
Sbjct: 293 MVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGK 352
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRV 393
+E+ +L+ MV++ P + + +V G GK + R+
Sbjct: 353 LEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARL 393
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 146/297 (49%), Gaps = 2/297 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+KD +P+ A+Y +I L + + DA +++ ++ +E+ C D Y + +
Sbjct: 120 QKDCHPDAAVYNCLIAGLCKMGKIDAARNVL-KMMLERSC-VPDVITYTSLIVGCCQTNA 177
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A + + M P +N +LN L E+ + + G E D N
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ LCE+G E A +L++ ++ C P+V TY++LM G C+ ++EA LLE M
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+T+ LI G + ++ + +++E M G P+ +Y +L GL + EA
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAH 357
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL+ M+ + +P V+Y L++GLC V+D +L+ M+++G P + + ++
Sbjct: 358 ELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMI 414
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 145/293 (49%), Gaps = 8/293 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
KD P+ Y++++N L + + D +++ + +E+ C+ + F +I + AG+
Sbjct: 365 EKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMM-LERGCQPNLVTFNTMIDGFCK-AGK 422
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ + + L M +C P V T++ +++ Y + + + A LG+ D +
Sbjct: 423 VDEGHKVLELMKEVSCTPDVVTYSTLIDG------YCKANRMQDAFAILGISPDKASYSS 476
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L+GLC G +E A V+D KQ C P Y+ ++ GLC+ +EA +L+ M G
Sbjct: 477 MLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERG 536
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + T++ILI+GL K +VE+ + +L+ M KGC P+ A+Y ++ G + A
Sbjct: 537 CEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAY 596
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ M P ++Y LI G C VE V++ M+++G P +
Sbjct: 597 QCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATY 649
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 5/155 (3%)
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+P+ TY L+ G GN + + M + D +T N ++ + G ++ +
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLD---R 77
Query: 290 LLERMKGKG-CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
L +GK C P + +Y +++GL +R EA +L+ MI + P Y LI GL
Sbjct: 78 ALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGL 137
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWRE-IVGC 382
C ++ VLK M+++ VP + + IVGC
Sbjct: 138 CKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGC 172
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 152/295 (51%), Gaps = 5/295 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+ S+ Y ++ + +I A + F + + R+K E+ F + F V +
Sbjct: 50 IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRV-FIEKNFILVFRA 108
Query: 137 YGNMAGRISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA--AKLG 193
YG A KAIE M + C +V++FN VLN+++ L+ Y K
Sbjct: 109 YGK-AHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTN 167
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ + N+++K +C+ G ++ A V E Q CEP+V TY TLM GLC++ ++EA
Sbjct: 168 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 227
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
LL+ M+ EG +VTFN+LI+GL K+G + KL++ M KGC PN +Y ++ GL
Sbjct: 228 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 287
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
K + +A L+ RM+ + P+ V+Y LI+GL Q D +L + ++G
Sbjct: 288 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 342
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 138/288 (47%), Gaps = 2/288 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+ + +PN + L+I + + D ++ + + ++K C D F Y + R
Sbjct: 165 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQK-CE-PDVFTYCTLMDGLCKEDR 222
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I +A+ L +M C+PS TFN+++N L + + + G + N
Sbjct: 223 IDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 282
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ GLC G L+ A +LD C PN TY TL++GL ++G + LL +E G
Sbjct: 283 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 342
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
A+ ++ LISGL K+ K EE M L ++M KGC PN Y ++ GL + + EAK
Sbjct: 343 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 402
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E++ M+ + +P+ +Y LI G + V K+M + VP
Sbjct: 403 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVP 450
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 125/239 (52%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +AIE +M C P V T+ +++ L E + G +
Sbjct: 186 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 245
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+L+ GLC+ G++ ++D + C PN TY+T+++GLC KG +++A LL+RM +
Sbjct: 246 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 305
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ VT+ LI+GL KQG+ +G+ LL ++ +G + N +Y ++ GL +++ E
Sbjct: 306 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE 365
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A L +M+ + P+ V Y LI GLC + +++ +L +MV +G P + ++
Sbjct: 366 AMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 424
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN I + G++ KA+ L M + C P+ T+ ++N LV + + +S
Sbjct: 280 YNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLE 339
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ G + + L+ GL + E A + + ++ C+PN+ YS L+ GLC +G ++
Sbjct: 340 ERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLD 399
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA +L M ++G + T++ LI G K G ++ +++ + M C PN Y ++
Sbjct: 400 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 459
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+GL + + EA + M+ + P V+Y +IHGLCN VE
Sbjct: 460 HGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVE 504
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 4/287 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PNE Y IIN L + D ++ R+ K C +D + +I GR +
Sbjct: 275 PNEVTYNTIINGLCLKGKLDKAVSLLDRMVASK-CVPNDVTYGTLINGLVKQ-GRSVDGV 332
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L + + ++ +++ L + E G++ + G + + + L+ GL
Sbjct: 333 HLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGL 392
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G L+ A +L E + C PN TYS+L+ G + GN ++A + + M +
Sbjct: 393 CREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNE 452
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ +++LI GL + GK+ E M + M G+G P+ +Y +++GL + +L
Sbjct: 453 ICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNE 512
Query: 329 MICERMS--PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
M+C+ P V+Y L+ LC Q + +L M+ +G P +
Sbjct: 513 MLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDL 559
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 133/276 (48%), Gaps = 20/276 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN +Y+ +I+ L + + D ++I+ + V K C + + ++IK + G
Sbjct: 376 KGCQPNIVVYSALIDGLCREGKLDEAKEILCEM-VNKGCTPNAFTYSSLIKGFFK-TGNS 433
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KAI +M NC P+ ++++++ L E ++T G+ D + +
Sbjct: 434 QKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSM 493
Query: 205 LKGLCENGNLEAAFYVLDEFPKQ--NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+ GLC G++E + +E Q + +P+V TY+ L+ LC++ ++ A LL M
Sbjct: 494 IHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDR 553
Query: 263 GIDADTVTFNILISGLR-KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + D +T NI ++ LR K ++G + L+ E++ L ++R
Sbjct: 554 GCNPDLITCNIFLNALREKLNPPQDGREFLD---------------ELVVRLHKRQRIVG 598
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
A +++ M+ + + P+ +++++I LC K V+ +
Sbjct: 599 AAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAI 634
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 5/163 (3%)
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE--RMESEGIDADTVTFNILISG 277
++DEF C VR+++++++ + ++G A E I + ++FN++I
Sbjct: 125 MVDEF---QCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKA 181
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
+ K G V+ +++ M + C P+ +Y ++ GL + R EA L+ M E PS
Sbjct: 182 MCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPS 241
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V++ LI+GLC + + V ++ M +G VP + I+
Sbjct: 242 SVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 284
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 142/281 (50%), Gaps = 14/281 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
PN Y +++ L +A+R +M+ + CR G NV+ YG + G
Sbjct: 259 PNLVTYNSLLHGLCRARRVSDALALMR----DMTCR---GCTPNVVT-YGTLIDGLCKVG 310
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A L DM P + +N+++N L A E + A G++ D +
Sbjct: 311 RVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYS 370
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++ GLC + L+ A +L + C P+V YSTL+ GLC+ G V+EAF L E M +
Sbjct: 371 SVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGD 430
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G DAD VT++ LI GL K G+V+E LL RM G P++ +Y ++ GL D EA
Sbjct: 431 GCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEA 490
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
ELV M +PS V+Y LIHG+C + V+ +L++
Sbjct: 491 IELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQ 531
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 147/308 (47%), Gaps = 15/308 (4%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKR-FDAIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
+ K+ PN L +++I+ L +AKR DA+ MQ + +D Y +
Sbjct: 36 RSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGI-----VADTVIYTALLSGLW 90
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
R+ +A+ L +M + C P+V T+N +++ L Q ++ +
Sbjct: 91 KEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMV 150
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQ-------NCEPNVRTYSTLMHGLCEKGNVEEA 252
N LL GL G LE A + E + C PNV TYS L+ GLC+ V +A
Sbjct: 151 TYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQA 210
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LLE M++ G D +T+ IL+ GL K+ KV ++L M GC PN +Y +L+G
Sbjct: 211 VELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHG 270
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L +R +A L+ M C +P+ V+Y LI GLC V+D +L M+ +G P
Sbjct: 271 LCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPD 330
Query: 373 MGMWREIV 380
+ ++ ++
Sbjct: 331 LMIYNMLI 338
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 142/293 (48%), Gaps = 2/293 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y+++I+ L +A R ++++ +K D Y ++ +++ A
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGC--SPDVITYTILVDGLCKESKVAAA 245
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L +M C P++ T+N +L+ L A+ + + G + L+ G
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G ++ A +L + + P++ Y+ L++GLC+ V+E+ LL R S GI D
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT++ +I GL + +++E +LL +K +GC P+ Y ++ GL + EA +L
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + V+Y LI GLC V++ +L +MV+ G P + ++
Sbjct: 426 VMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLI 478
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 143/289 (49%), Gaps = 2/289 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + +P+ YT++++ L + + A ++++ + ++ C + YN + A
Sbjct: 218 KARGCSPDVITYTILVDGLCKESKVAAAWEVLREM-LDAGC-VPNLVTYNSLLHGLCRAR 275
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+S A+ + DM C P+V T+ +++ L + + G D N
Sbjct: 276 RVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYN 335
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+L+ GLC+ ++ + +L +P+V TYS++++GLC ++EA LL ++S
Sbjct: 336 MLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSR 395
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D + ++ LI GL K GKV+E L E M G GC + +Y ++ GL R EA
Sbjct: 396 GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEA 455
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ RM+ PS ++Y LI GLC+ +++ ++++M + P
Sbjct: 456 HLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAP 504
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 144/299 (48%), Gaps = 9/299 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I+ L + D +++ + +K + C S YN + G++ +A+
Sbjct: 112 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVE-CSPS-MVTYNTLLDGLFRTGKLERAM 169
Query: 149 ---ETLFDMPSYN----CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ + D S++ C P+V T++++++ L A + + S G D
Sbjct: 170 ALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITY 229
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
IL+ GLC+ + AA+ VL E C PN+ TY++L+HGLC V +A L+ M
Sbjct: 230 TILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTC 289
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + VT+ LI GL K G+V++ +L M KG P+ Y ++ GL + E
Sbjct: 290 RGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDE 349
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ L+ R + + P V+Y +I+GLC +++ +L + +G P + ++ ++
Sbjct: 350 SIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLI 408
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 117/247 (47%), Gaps = 7/247 (2%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G I +A +M S N P+V +++++ L AK + + + G+ D
Sbjct: 22 GGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVI 81
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
LL GL + L+ A +L E CEPNV TY++L+ GLC+ + A L E M+
Sbjct: 82 YTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMK 141
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-------GCYPNSASYQEVLYGL 313
S VT+N L+ GL + GK+E M L + M + C PN +Y ++ GL
Sbjct: 142 SVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGL 201
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
R +A EL+ M SP ++Y L+ GLC + V VL++M+ G VP +
Sbjct: 202 CKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNL 261
Query: 374 GMWREIV 380
+ ++
Sbjct: 262 VTYNSLL 268
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 143/296 (48%), Gaps = 18/296 (6%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYG-N 139
K P+ +Y ++IN L +A + D +++R S G +V+ IYG
Sbjct: 325 KGGTPDLMIYNMLINGLCKADQVDESIALLRRA-------VSGGIKPDVVTYSSVIYGLC 377
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ R+ +A L + S C P V ++ +++ L A E +Y A G + D
Sbjct: 378 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVV 437
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+ L+ GLC+ G ++ A +L + P+ TY++L+ GLC+ +++EA L+E M
Sbjct: 438 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 497
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-----GCYPNSASYQEVLYGLL 314
E VT+NILI G+ + +V+ + LLE+ K + G ++ +Y ++ GL
Sbjct: 498 ERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLC 557
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV-DWVLKKMVQQGF 369
R EA + MI + P ++Y L+ GL K + ++ VL +MVQ G+
Sbjct: 558 KAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGY 613
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL+G C G ++ A DE +N PNV S L+ GLC+ +A M+ G
Sbjct: 15 LLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSG 74
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I ADTV + L+SGL K+ ++++ + +L M+ GC PN +Y ++ GL A+
Sbjct: 75 IVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQ 134
Query: 324 ELVGRMICERMSPSFVSYKKLIHGL 348
EL M SPS V+Y L+ GL
Sbjct: 135 ELFEHMKSVECSPSMVTYNTLLDGL 159
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 152/316 (48%), Gaps = 1/316 (0%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L P V + +DP+ + + N K + + Y +I KL +F+A+E+++
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
++ +G + +K YG G++ +A+ M Y+C P+V ++N ++++LV
Sbjct: 65 DMRENVGNHMLEGVYVGAMKNYGR-KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 123
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ + + +Y G+ D I +K C+ AA +L+ Q CE NV
Sbjct: 124 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 183
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y T++ G E+ E + L +M + G+ TFN L+ L K+G V+E KLL+++
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+G PN +Y + GL + A +VG +I + P ++Y LI+GLC +
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 356 DVDWVLKKMVQQGFVP 371
+ + L KMV +G P
Sbjct: 304 EAEVYLGKMVNEGLEP 319
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 117/228 (51%), Gaps = 6/228 (2%)
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
+ TFN +L +L E + + K GV + N+ ++GLC+ G L+ A ++
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
+Q +P+V TY+ L++GLC+ +EA L +M +EG++ D+ T+N LI+G K G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
V+ +++ G P+ +Y+ ++ GL + A L + + + P+ + Y
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV------GCVT 384
LI GL NQ ++ + + +M ++G +P + + +V GCV+
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 137/284 (48%), Gaps = 4/284 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +I L + +F E + ++ E L D + YN + I G G + +
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL--EPDSYTYNTL-IAGYCKGGMVQLA 340
Query: 149 ETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E + +N + P T+ +++ L ++ A G++ + N L+KG
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L G + A + +E ++ P V+T++ L++GLC+ G V +A GL++ M S+G D
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TFNILI G Q K+E +++L+ M G P+ +Y +L GL +F + E
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + +P+ ++ L+ LC + +++ +L++M + P
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 123/249 (49%), Gaps = 3/249 (1%)
Query: 125 FSDGFFYNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
F D F +N++ I+G + ++ A+E L M P V T+N +LN L + ++
Sbjct: 458 FPDIFTFNIL-IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
Y + + G + NILL+ LC L+ A +L+E ++ P+ T+ TL+ G
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 244 CEKGNVEEAFGLLERME-SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
C+ G+++ A+ L +ME + + + T T+NI+I ++ V KL + M + P+
Sbjct: 577 CKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+Y+ ++ G + + M+ PS + ++I+ LC + V + ++
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696
Query: 363 KMVQQGFVP 371
+MVQ+G VP
Sbjct: 697 RMVQKGLVP 705
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 126/290 (43%), Gaps = 12/290 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGNMA-GR 143
PN Y L I L Q D ++ C G +VI IYG +
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVG-------CLIEQGPKPDVITYNNLIYGLCKNSK 301
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A L M + P T+N ++ + + I A G D
Sbjct: 302 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 361
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC G A + +E + +PNV Y+TL+ GL +G + EA L M +G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + TFNIL++GL K G V + L++ M KG +P+ ++ +++G + + A
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
E++ M+ + P +Y L++GLC EDV K MV++G P +
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 116/254 (45%), Gaps = 5/254 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +S A + M S +P + TFN++++ + I GV+ D
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL GLC+ E ++ C PN+ T++ L+ LC ++EA GLLE M++
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGLLDKKRFP 320
+ ++ D VTF LI G K G ++ L +M + ++ +Y +++ +K
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVT 619
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A++L M+ + P +Y+ ++ G C V L +M++ GF+P + ++
Sbjct: 620 MAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVI 679
Query: 381 GCVTFGKDNRNRVY 394
C+ +RVY
Sbjct: 680 NCLCV----EDRVY 689
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 109/223 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G ++A+ + P+V +N ++ L + + E + ++ G+ +
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ GLC+ G + A ++ + P++ T++ L+HG + +E A +L+ M
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+D D T+N L++GL K K E+ M+ + M KGC PN ++ +L L ++ E
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A L+ M + ++P V++ LI G C ++ + +KM
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+K G ++ A V + +CEP V +Y+ +M L + G ++A + RM GI
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +F I + K + ++LL M +GC N +Y V+ G ++ E E
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
L G+M+ +S ++ KL+ LC + V++ + +L K++++G +P +
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL 251
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 85 KDYNPNEALYTLIINKLA-QAKRFDAIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K Y P+ + ++I+ + Q K +A+E D+M V+ D + YN +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD-----PDVYTYNSLLNGLCKT 509
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ +ET M C P++ TFN++L L + E G+ V DA
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G C+NG+L+ A+ + + + + TY+ ++H EK NV A L + M
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ D T+ +++ G K G V G K L M G P+ + V+ L + R
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689
Query: 321 EAKELVGRMICERMSPSFVS 340
EA ++ RM+ + + P V+
Sbjct: 690 EAAGIIHRMVQKGLVPEAVN 709
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 8/137 (5%)
Query: 253 FGLLERMESEGIDADTVTFNILISGLR--------KQGKVEEGMKLLERMKGKGCYPNSA 304
+G E ME +D N ++ G+ ++GKV+E + + ERM C P
Sbjct: 53 YGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVF 112
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
SY ++ L+D F +A ++ RM ++P S+ + C +L M
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
Query: 365 VQQGFVPRMGMWREIVG 381
QG + + +VG
Sbjct: 173 SSQGCEMNVVAYCTVVG 189
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 156/305 (51%), Gaps = 4/305 (1%)
Query: 64 IFSNLR--DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK 121
+ +N R D V + SK ++ PN Y+++I+ L +A R + + Q + VEK
Sbjct: 213 VLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEM-VEK 271
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
C+ S + +IK ++ G KA++ L +M + C P+V T+ ++++ L E
Sbjct: 272 GCQPSTRTYTVLIKAKCDI-GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 330
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
G++ K G+ N L+ G C+ G + +AF +L K NC+PN+RTY+ LM
Sbjct: 331 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 390
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GLC +AF LL R+ G+ D VT+NIL+ G K+G++ + M G P
Sbjct: 391 GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 450
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ ++ ++ GL R +A ++G M+ + +S V++ LI G C +DV ++
Sbjct: 451 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 510
Query: 362 KKMVQ 366
+ MV+
Sbjct: 511 ENMVE 515
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
NC P+ T++++++ L A E + + G + +L+K C+ G + A
Sbjct: 237 NCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 296
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+LDE + C PNV TY+ L+ LC +G +EEA G+ +M G+ +TFN LI+G
Sbjct: 297 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 356
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
K+G V +LL M+ C PN +Y E++ GL + +A L+ R++ + P
Sbjct: 357 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPD 416
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
V+Y L+ G C + + + M G P
Sbjct: 417 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 450
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNV 249
+LG +D L+ C +L AF V ++ K+ NC PN TYS L+HGLCE G +
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 258
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EEAF L + M +G T T+ +LI G ++ MK+L+ M K C PN +Y +
Sbjct: 259 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 318
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ L + + EA + +M+ + P +++ LI+G C + V +L M +
Sbjct: 319 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 378
Query: 370 VPRMGMWREIV 380
P + + E++
Sbjct: 379 KPNIRTYNELM 389
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 130/322 (40%), Gaps = 44/322 (13%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +T +I+ L + R + I+ + V+K + F +I + +I KA
Sbjct: 450 PDGFTFTALIDGLCKLGRLEQANGILGSM-VKKGISLDEVTFTALIDGHC----KIGKAK 504
Query: 149 ETLF---DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+ F +M C + TFN L+ L E + K G+ IL+
Sbjct: 505 DVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 564
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
+G C G + +L+ + C PNV TY+ +++GLC G VEEA +L M S G+
Sbjct: 565 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 624
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ T+ +L+ K G+++ +++ M GC PNS Y +L G + A+ L
Sbjct: 625 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 684
Query: 326 --VGRMICERMS----------------------------------PSFVSYKKLIHGLC 349
G + +S P+ Y L+ GLC
Sbjct: 685 SSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLC 744
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
+ + + D + + MV+ G P
Sbjct: 745 KEGRIIEADQLTQDMVKHGLFP 766
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 128/298 (42%), Gaps = 2/298 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
++ + PN Y ++ L + + +++R+ L D YN++ G
Sbjct: 374 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL--LPDRVTYNILVDGFCKEG 431
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+++ A M S P TF +++ L + GI S K G+ +D
Sbjct: 432 QLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT 491
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G + ++ + + C T++ + L + + EA +L +M
Sbjct: 492 ALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY 551
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ VT ILI G + G+ +K+LERMK GC PN +Y ++ GL + R EA
Sbjct: 552 GLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 611
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++ M +SP+ +Y L+ ++ ++ MV+ G P ++ ++
Sbjct: 612 ETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 669
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 133/320 (41%), Gaps = 59/320 (18%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KDY NEA ++ K+ + ++ + I +E CR AG
Sbjct: 534 KDYKLNEA--NAMLGKMMKYGLVPSV--VTHTILIEGHCR----------------AGET 573
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ +++ L M C P+V T+ +++N L + E + I S + GV + +L
Sbjct: 574 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 633
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG------------LCEKG----- 247
+K + G L+ AF ++ K C+PN YS L+ G L G
Sbjct: 634 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDAR 693
Query: 248 --------------------NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
+V+ A + + ++ G+ + + +N L+ GL K+G++ E
Sbjct: 694 SLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-YNFLVVGLCKEGRIIEA 752
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+L + M G +P+ A ++ ++ E + ++ + PSF SY +IHG
Sbjct: 753 DQLTQDMVKHGLFPDKA-ISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHG 811
Query: 348 LCNQKLVEDVDWVLKKMVQQ 367
L N+ V++ ++ +V+
Sbjct: 812 LRNEGRVQEAQKLVSDLVRH 831
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 36/181 (19%)
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE---------- 285
YSTL+ L + AF + RM +EG + + +++ L K G V+
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198
Query: 286 -------------------------EGMKLLERM-KGKGCYPNSASYQEVLYGLLDKKRF 319
E ++ E+M K + C PNS +Y +++GL + R
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 258
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA +L M+ + PS +Y LI C+ + + +L +M + VP + + +
Sbjct: 259 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 318
Query: 380 V 380
+
Sbjct: 319 I 319
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 156/305 (51%), Gaps = 4/305 (1%)
Query: 64 IFSNLR--DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK 121
+ +N R D V + SK ++ PN Y+++I+ L +A R + + Q + VEK
Sbjct: 236 VLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEM-VEK 294
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
C+ S + +IK ++ G KA++ L +M + C P+V T+ ++++ L E
Sbjct: 295 GCQPSTRTYTVLIKAKCDI-GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 353
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
G++ K G+ N L+ G C+ G + +AF +L K NC+PN+RTY+ LM
Sbjct: 354 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 413
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GLC +AF LL R+ G+ D VT+NIL+ G K+G++ + M G P
Sbjct: 414 GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 473
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ ++ ++ GL R +A ++G M+ + +S V++ LI G C +DV ++
Sbjct: 474 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 533
Query: 362 KKMVQ 366
+ MV+
Sbjct: 534 ENMVE 538
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
NC P+ T++++++ L A E + + G + +L+K C+ G + A
Sbjct: 260 NCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 319
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+LDE + C PNV TY+ L+ LC +G +EEA G+ +M G+ +TFN LI+G
Sbjct: 320 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 379
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
K+G V +LL M+ C PN +Y E++ GL + +A L+ R++ + P
Sbjct: 380 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPD 439
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
V+Y L+ G C + + + M G P
Sbjct: 440 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 473
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNV 249
+LG +D L+ C +L AF V ++ K+ NC PN TYS L+HGLCE G +
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 281
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EEAF L + M +G T T+ +LI G ++ MK+L+ M K C PN +Y +
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ L + + EA + +M+ + P +++ LI+G C + V +L M +
Sbjct: 342 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 401
Query: 370 VPRMGMWREIV 380
P + + E++
Sbjct: 402 KPNIRTYNELM 412
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 130/306 (42%), Gaps = 28/306 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +T +I+ L + R + I+ + V+K + F +I + +I KA
Sbjct: 473 PDGFTFTALIDGLCKLGRLEQANGILGSM-VKKGISLDEVTFTALIDGHC----KIGKAK 527
Query: 149 ETLF---DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+ F +M C + TFN L+ L E + K G+ IL+
Sbjct: 528 DVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 587
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
+G C G + +L+ + C PNV TY+ +++GLC G VEEA +L M S G+
Sbjct: 588 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 647
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ T+ +L+ K G+++ +++ M GC PNS Y +L G + A+ L
Sbjct: 648 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 707
Query: 326 --VGRMICERMS------------------PSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
G + +S P+ Y L+ GLC + + + D + + MV
Sbjct: 708 SSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMV 767
Query: 366 QQGFVP 371
+ G P
Sbjct: 768 KHGLFP 773
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 128/298 (42%), Gaps = 2/298 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
++ + PN Y ++ L + + +++R+ L D YN++ G
Sbjct: 397 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL--LPDRVTYNILVDGFCKEG 454
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+++ A M S P TF +++ L + GI S K G+ +D
Sbjct: 455 QLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT 514
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G + ++ + + C T++ + L + + EA +L +M
Sbjct: 515 ALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY 574
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ VT ILI G + G+ +K+LERMK GC PN +Y ++ GL + R EA
Sbjct: 575 GLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 634
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++ M +SP+ +Y L+ ++ ++ MV+ G P ++ ++
Sbjct: 635 ETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 692
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 128/303 (42%), Gaps = 41/303 (13%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KDY NEA ++ K+ + ++ + I +E CR AG
Sbjct: 557 KDYKLNEA--NAMLGKMMKYGLVPSV--VTHTILIEGHCR----------------AGET 596
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ +++ L M C P+V T+ +++N L + E + I S + GV + +L
Sbjct: 597 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 656
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL-------LE 257
+K + G L+ AF ++ K C+PN YS L+ G A L
Sbjct: 657 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDAR 716
Query: 258 RMESEGIDADTVT-------------FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ SE D + ++ +N L+ GL K+G++ E +L + M G +P+ A
Sbjct: 717 SLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA 776
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ ++ E + ++ + PSF SY +IHGL N+ V++ ++ +
Sbjct: 777 -ISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 835
Query: 365 VQQ 367
V+
Sbjct: 836 VRH 838
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 36/257 (14%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+ +PN YT+IIN L R + E I+ + + F Y V+ AG
Sbjct: 607 KQAGCSPNVYTYTIIINGLCNNGRVEEAETIL--FSMSSFGVSPNHFTYAVLVKAHVKAG 664
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ +A + + M C P+ ++ +L+ G S +G
Sbjct: 665 RLDRAFQIVSTMVKNGCQPNSHIYSALLS------------GFVLSNTAIGA-------- 704
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNC---------EPNVRTYSTLMHGLCEKGNVEEAF 253
+ L G+L+A +E NC P Y+ L+ GLC++G + EA
Sbjct: 705 ---RALSSTGDLDARSLSSEE-NDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEAD 760
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L + M G+ D +I I K K + ++ ++ + P+ ASY V++GL
Sbjct: 761 QLTQDMVKHGLFPDKAISSI-IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGL 819
Query: 314 LDKKRFPEAKELVGRMI 330
++ R EA++LV ++
Sbjct: 820 RNEGRVQEAQKLVSDLV 836
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 36/181 (19%)
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE---------- 285
YSTL+ L + AF + RM +EG + + +++ L K G V+
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221
Query: 286 -------------------------EGMKLLERM-KGKGCYPNSASYQEVLYGLLDKKRF 319
E ++ E+M K + C PNS +Y +++GL + R
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 281
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA +L M+ + PS +Y LI C+ + + +L +M + VP + + +
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341
Query: 380 V 380
+
Sbjct: 342 I 342
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 164/351 (46%), Gaps = 36/351 (10%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L P V + +DP+ + + N+ + + + Y II KL F A+E+++
Sbjct: 5 LLPKHVAAVLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLA 64
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
+++ +G + +K YG G++ +A++ M YNC PSV ++N ++N+LV
Sbjct: 65 ETRMDIDNSLLEGVYIGAMKSYGR-KGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVE 123
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE----- 230
+ + + ++ +G+ D I +K C +A +L+ Q C+
Sbjct: 124 SGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVA 183
Query: 231 ------------------------------PNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
P+V T++ L+H LC+KG V+E+ LL ++
Sbjct: 184 YCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVL 243
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G+ ++ TFNI I GL ++G + M +L+ + +G P+ +Y ++ GL
Sbjct: 244 KKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVV 303
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA++ + +++ + P +Y LI G C ++++ + +L+ + +GFVP
Sbjct: 304 EAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVP 354
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 141/302 (46%), Gaps = 8/302 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +T+ I + KR + ++ + V + C+ + + V+ + R+ +A
Sbjct: 144 PDVYTFTIRIKSFCRTKRPHSALRLLNNM-VSQGCQLNAVAYCTVVAGFYEENYRV-EAY 201
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E DM +P V TFN +L+ L E + + K G+ + NI ++GL
Sbjct: 202 ELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGL 261
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G L A +LD ++ P+V TY+TL+ GLC+ NV EA L ++ + G++ D
Sbjct: 262 CRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDG 321
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N LI G K G ++ K+L+ KG P+ +Y ++ GL A L
Sbjct: 322 FTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNA 381
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV------GC 382
+ + + P+ + Y LI GLC + L+ ++ +M + G + + ++ GC
Sbjct: 382 ALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGC 441
Query: 383 VT 384
V+
Sbjct: 442 VS 443
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ I+ L M S+ P V T+N VLN L A ++ + + + G + N
Sbjct: 476 KMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYN 535
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ES 261
IL + LC+ G + A ++DE + P+ +++T++ G G+++ A+ L RM E
Sbjct: 536 ILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQ 595
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ T T+NI+I+ ++ + G KL M GC P++ +Y+ ++ G
Sbjct: 596 YKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDS 655
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ + MI + PS ++ ++I+ LC Q V + ++ MV G VP +
Sbjct: 656 GYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEV 707
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 137/335 (40%), Gaps = 38/335 (11%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P+E Y +IN L Q D + + L YN++ G I
Sbjct: 350 KGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGL--KPTVILYNMLIKGLCQEGLI 407
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A++ + +M C + T+NLV+N L + + A G D N L
Sbjct: 408 LQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTL 467
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C+ +E +L++ P+V TY+++++GL + E+ E M +G
Sbjct: 468 IDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGC 527
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ +T+NIL L K GKV E + L++ + KG P++ S+ ++ G + A +
Sbjct: 528 VPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQ 587
Query: 325 LVGRM-------------------ICERM-----------------SPSFVSYKKLIHGL 348
L RM E++ +P +Y+ +I G
Sbjct: 588 LFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGF 647
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
C + L +M+++GF+P + + ++ C+
Sbjct: 648 CITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCL 682
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 135/298 (45%), Gaps = 4/298 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAG 142
R+ P+ Y +I L + E + ++ L DGF YN +I Y M G
Sbjct: 279 REGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL--EPDGFTYNTLIDGYCKM-G 335
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A + L P T+ ++N L ++ +A G++ N
Sbjct: 336 MLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYN 395
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+L+KGLC+ G + A +++E + C ++ TY+ +++GLC+ G V +A L+ ++
Sbjct: 396 MLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAK 455
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D TFN LI G KQ K+E +++L +M G P+ +Y VL GL + +
Sbjct: 456 GYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDL 515
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E M+ + P+ ++Y L LC V + ++ +++ +G P + I+
Sbjct: 516 METFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATII 573
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 137/311 (44%), Gaps = 2/311 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + + +++ L + E ++ ++ + +C S+ F +N+ G +S A+
Sbjct: 214 PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMC--SNLFTFNIFIQGLCRKGMLSGAM 271
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L + P V T+N ++ L E + G+E D N L+ G
Sbjct: 272 SMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGY 331
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G L+ A +L + P+ TY +L++GLC+ ++ A L +G+
Sbjct: 332 CKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTV 391
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ +N+LI GL ++G + + ++++ M GC + +Y V+ GL +A L+
Sbjct: 392 ILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMND 451
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
I + P ++ LI G C Q +E +L KM G P + + ++ ++
Sbjct: 452 AIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVK 511
Query: 389 NRNRVYVTETV 399
N + + ET+
Sbjct: 512 NEDLMETFETM 522
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 35/174 (20%)
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERME---------------------------------- 260
Y M KG V+EA + ERM+
Sbjct: 78 VYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM 137
Query: 261 -SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ GI D TF I I + + ++LL M +GC N+ +Y V+ G ++
Sbjct: 138 KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYR 197
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EA EL M+ + P ++ KL+H LC + V++ + +L K++++G +
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNL 251
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 86/216 (39%), Gaps = 18/216 (8%)
Query: 70 DPISVISVLNQYSK---------------RKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
D I+ SVLN SK K PN+ Y ++ L +A + + D++
Sbjct: 495 DVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLV 554
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM-PSYNCWPSVKTFNLVLNLL 173
I + K F +I + N G + A + M Y + T+N+++N
Sbjct: 555 DEI-LNKGITPDTVSFATIISGFAN-NGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAF 612
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ ++ G D +++ G C GN ++ + L E ++ P++
Sbjct: 613 AEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSL 672
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
T+ +++ LC + V EA ++ M GI + V
Sbjct: 673 TTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 164/327 (50%), Gaps = 8/327 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
++P ++ K+ D + + + +K Y + ++Y L+I+KL A F I+ ++
Sbjct: 69 ITPFQLCKLLELPLDVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLL 128
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFNLVLNLLV 174
++K E + F + F ++K YG AG +A L DM Y C PS +++N+VL++LV
Sbjct: 129 QMKEEGIV-FRESLFILIMKYYGR-AGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLV 186
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
++ GV + +++K LC ++ A +L + K C PN
Sbjct: 187 VGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSM 246
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y TL+ L ++ V+EA LLE M G D TFN +I G + +V EG KL++RM
Sbjct: 247 IYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRM 306
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC-NQKL 353
KG PN +Y +++GL R EA+ L+ ++ P+ V + L++G N +L
Sbjct: 307 ILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKV----PGPNVVHFNTLVNGFVRNGRL 362
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
E +V KM+ G+VP + + +V
Sbjct: 363 NEATAFVYDKMINNGYVPDVFTFSTLV 389
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 142/303 (46%), Gaps = 4/303 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN YT++I+ + + + I++ + + + G YN + G+I
Sbjct: 411 KGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVG--YNALISALCKHGKI 468
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A++ +M S C P + TFN ++ L + +Y GV ++ N L
Sbjct: 469 HEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTL 528
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G ++ A ++++ + C + TY+ L+ LC+ G VE+ GL E M +G+
Sbjct: 529 IHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGL 588
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+T NILI+G GKV ++ + M +G P+ +Y ++ GL + R EA
Sbjct: 589 TPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALN 648
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
L ++ E + P ++Y LI LC + +D ++L + V+ GFVP W +V
Sbjct: 649 LFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV--YN 706
Query: 385 FGK 387
FGK
Sbjct: 707 FGK 709
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 136/293 (46%), Gaps = 13/293 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS---DGFFYNVIKIYGNMA 141
K + PN+ Y +++ L + R D + ++ ++ + F+ +GF N
Sbjct: 309 KGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRN--------- 359
Query: 142 GRISKAIETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GR+++A ++D N + P V TF+ ++N L L+G + G + +
Sbjct: 360 GRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNT 419
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
IL+ G C+ G LE A +L E + N Y+ L+ LC+ G + EA + M
Sbjct: 420 YTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMS 479
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+G D TFN LI GL + ++E+ + L M +G NS ++ +++ L +
Sbjct: 480 SKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQ 539
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EA +LV M+ ++Y LI LC VE + ++M+++G P +
Sbjct: 540 EALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSI 592
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 130/297 (43%), Gaps = 7/297 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +PN+ + L++ L D ++ R + C + Y + + R+
Sbjct: 204 KGVSPNDYTFGLVMKALCMVNEVDN-ACLLLRDMTKHGC-VPNSMIYQTLIDALSKRDRV 261
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A++ L +M C P V TFN V+ E + G + L
Sbjct: 262 DEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYL 321
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL-ERMESEG 263
+ GLC+ ++ A +L + P PNV ++TL++G G + EA + ++M + G
Sbjct: 322 MHGLCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNG 377
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D TF+ L++GL K+G ++L+ M KGC PN +Y ++ G K + EA
Sbjct: 378 YVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAG 437
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ M+ + S + V Y LI LC + + + +M +G P + + ++
Sbjct: 438 LILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLI 494
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA-KLYGEIQGIYTSAAKLGVEIDAC 199
G + K + +M PS+ T N+++N +A K++ ++ + + G D
Sbjct: 570 TGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHR-GFSPDIV 628
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ GLC+ G ++ A + ++ + +P+ TY+TL+ LC +G ++A LL R
Sbjct: 629 TYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRG 688
Query: 260 ESEGIDADTVTFNILISGLRKQGKVE 285
G + VT+NIL+ KQ E
Sbjct: 689 VENGFVPNDVTWNILVYNFGKQSNSE 714
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG-KGCYPNSASYQEVLYGL 313
LL +M+ EGI F +++ + G + +LL MKG C P+ SY VL L
Sbjct: 126 LLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVL 185
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ A + M+ + +SP+ ++ ++ LC V++ +L+ M + G VP
Sbjct: 186 VVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNS 245
Query: 374 GMWREIVGCVTFGKDNRNRV 393
+++ ++ ++ R+RV
Sbjct: 246 MIYQTLIDALS----KRDRV 261
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 155/319 (48%), Gaps = 14/319 (4%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+K PNE Y ++IN + + +++ +K G NV+ + G
Sbjct: 153 KKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK-------ESGLAPNVVTYSTVIHG 205
Query: 143 -----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
++ A + M C P++ T+N +L+ L L E + + G++ D
Sbjct: 206 FCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPD 265
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+ L+ GLC+ G ++ A V ++ +C P+V YSTL+ GLC+ G ++EA L E
Sbjct: 266 KFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFE 325
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+M + D VTF L+ GL K +++E ++LE M+ + C PN +Y ++ GL
Sbjct: 326 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 385
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+ +A+E+ RMI + P+ V+Y LIHG C V+ ++++M G +P + +
Sbjct: 386 QVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYN 445
Query: 378 EIVG--CVTFGKDNRNRVY 394
++ C T NR++
Sbjct: 446 TLIDGLCKTGRAPEANRLF 464
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 139/292 (47%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ L + D +++ ++ L D F Y+ + G+I A+
Sbjct: 229 PNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL--QPDKFSYDTLMAGLCKTGKIDMAL 286
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ D + +C P V ++ ++ L A E ++ + E D L+ GL
Sbjct: 287 KVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 346
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ L+ A VL+ +NC PNV TYS+L+ GLC+ G V +A + +RM GI+ +
Sbjct: 347 CKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV 406
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N LI G V+ + L+E M GC P+ +Y ++ GL R PEA L G
Sbjct: 407 VTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD 466
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + +P ++Y LI G C + ++ + M++Q +P + + +V
Sbjct: 467 MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 518
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 117/240 (48%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGR+ +A + M +C P V TF +++ L E Q + + +
Sbjct: 314 AGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVIT 373
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L+ GLC+ G + A V + EPNV TY++L+HG C V+ A L+E M
Sbjct: 374 YSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT 433
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G D +T+N LI GL K G+ E +L MK K C P+ +Y ++ G +R
Sbjct: 434 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 493
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A+ L M+ + + P V++ L+ G CN LV+D + +L++MV P + + +V
Sbjct: 494 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLV 553
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 141/300 (47%), Gaps = 12/300 (4%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG--- 142
D P+ Y+ +I L +A R D + ++++ E C +V+ M G
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMR-ENSCE------PDVVTFTALMDGLCK 348
Query: 143 --RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
R+ +A + L M NC P+V T++ +++ L + Q ++ G+E +
Sbjct: 349 GDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVT 408
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C +++A +++E C P++ TY+TL+ GLC+ G EA L M+
Sbjct: 409 YNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK 468
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++ + D +T++ LI G K +++ L + M + P+ ++ ++ G +
Sbjct: 469 AKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVD 528
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A+ L+ M+ SP +Y L+ G C + + VLK+M ++G P + + ++
Sbjct: 529 DAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 588
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 5/284 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN Y ++I L ++ D ++++ ++ D YN + A +KA
Sbjct: 56 TPNVFTYAVVIQGLCKSGDLDKACELLEEMRESG--PVPDAAIYNFVIHALCKARNTAKA 113
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ M C +V T+ ++++ L A E + K G + N+L+ G
Sbjct: 114 LDYFRSM---ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLING 170
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ + A+ +L E + PNV TYST++HG C + V+ A+ L +M G +
Sbjct: 171 FCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPN 230
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+N L+SGL + G ++E +LL+ M+ +G P+ SY ++ GL + A ++
Sbjct: 231 LVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFE 290
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P V+Y LI GLC +++ + +KM + P
Sbjct: 291 DNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEP 334
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 134/301 (44%), Gaps = 3/301 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I+ D+ +M+ + D YN + GR +A
Sbjct: 404 PNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC--LPDIITYNTLIDGLCKTGRAPEAN 461
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
DM + C P V T++ ++ + + ++ K V D + L++G
Sbjct: 462 RLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 521
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G ++ A +L+E +C P+V TY++L+ G C+ G + EA +L+RM G +
Sbjct: 522 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 581
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ LI + GK +LLE M G G PN +Y+ ++ G EA++++ R
Sbjct: 582 VTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILER 641
Query: 329 M-ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
+ E +Y+ ++ GLC + +L+ + Q G PR ++ ++ + GK
Sbjct: 642 LERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGK 701
Query: 388 D 388
+
Sbjct: 702 E 702
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 3/212 (1%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
+V T+N + L+ A+ E I + G+ + ++++GLC++G+L+ A +L
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
+E + P+ Y+ ++H LC+ N +A ME E + +T+ I+I GL K
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECE---KNVITWTIMIDGLCKA 139
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
++ E +MK KG PN +Y ++ G + A L+ M ++P+ V+Y
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+IHG C Q V+ + ++MV+ G +P +
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNL 231
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 122/289 (42%), Gaps = 47/289 (16%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDA----IEDIMQRIKVEKLCRFSDGFFYNVIKIYG 138
K K NP+ Y+ +I + +R D +D++++ + + FS +++ Y
Sbjct: 468 KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFS-----TLVEGYC 522
Query: 139 NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE--- 195
N AG + A L +M + +C P V T+ +++ E + + AK G +
Sbjct: 523 N-AGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 581
Query: 196 ------IDACC--------------------------LNILLKGLCENGNLEAAFYVLDE 223
IDA C L+ G C G+LE A +L+
Sbjct: 582 VTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILER 641
Query: 224 FPK-QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
+ +NC+ ++ Y +M GLC G + A LLE ++ G + LI GL +
Sbjct: 642 LERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGK 701
Query: 283 KVEEGMKLLERMK-GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
++ + M++LE M + PN+ +Y+ V+ L + R EA L ++
Sbjct: 702 ELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 750
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
+Q + NV TY+ L L ++E +L+ GI + T+ ++I GL K G ++
Sbjct: 17 QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD 76
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
+ +LLE M+ G P++A Y V++ L + +A + M CE+ + +++ +I
Sbjct: 77 KACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEK---NVITWTIMI 133
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVP 371
GLC + + KM ++G VP
Sbjct: 134 DGLCKANRLPEATTYFAKMKKKGTVP 159
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%)
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ +G D + T+N L L + +++E +L+ G PN +Y V+ GL
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+A EL+ M P Y +IH LC +
Sbjct: 76 DKACELLEEMRESGPVPDAAIYNFVIHALCKAR 108
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 155/319 (48%), Gaps = 14/319 (4%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+K PNE Y ++IN + + +++ +K G NV+ + G
Sbjct: 34 KKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK-------ESGLAPNVVTYSTVIHG 86
Query: 143 -----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
++ A + M C P++ T+N +L+ L L E + + G++ D
Sbjct: 87 FCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPD 146
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+ L+ GLC+ G ++ A V ++ +C P+V YSTL+ GLC+ G ++EA L E
Sbjct: 147 KFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFE 206
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+M + D VTF L+ GL K +++E ++LE M+ + C PN +Y ++ GL
Sbjct: 207 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 266
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+ +A+E+ RMI + P+ V+Y LIHG C V+ ++++M G +P + +
Sbjct: 267 QVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYN 326
Query: 378 EIVG--CVTFGKDNRNRVY 394
++ C T NR++
Sbjct: 327 TLIDGLCKTGRAPEANRLF 345
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 138/292 (47%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ L + D +++ ++ L D F Y+ + G+I A+
Sbjct: 110 PNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL--QPDKFSYDTLMAGLCKTGKIDMAL 167
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ D + +C P V ++ ++ L E ++ + E D L+ GL
Sbjct: 168 KVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 227
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ L+ A VL+ +NC PNV TYS+L+ GLC+ G V +A + +RM GI+ +
Sbjct: 228 CKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV 287
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N LI G V+ + L+E M GC P+ +Y ++ GL R PEA L G
Sbjct: 288 VTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD 347
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + +P ++Y LI G C + ++ + M++Q +P + + +V
Sbjct: 348 MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 399
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 116/240 (48%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GR+ +A + M +C P V TF +++ L E Q + + +
Sbjct: 195 TGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVIT 254
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L+ GLC+ G + A V + EPNV TY++L+HG C V+ A L+E M
Sbjct: 255 YSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT 314
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G D +T+N LI GL K G+ E +L MK K C P+ +Y ++ G +R
Sbjct: 315 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 374
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A+ L M+ + + P V++ L+ G CN LV+D + +L++MV P + + +V
Sbjct: 375 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLV 434
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 140/300 (46%), Gaps = 12/300 (4%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG--- 142
D P+ Y+ +I L + R D + ++++ E C +V+ M G
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMR-ENSCE------PDVVTFTALMDGLCK 229
Query: 143 --RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
R+ +A + L M NC P+V T++ +++ L + Q ++ G+E +
Sbjct: 230 GDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVT 289
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C +++A +++E C P++ TY+TL+ GLC+ G EA L M+
Sbjct: 290 YNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK 349
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++ + D +T++ LI G K +++ L + M + P+ ++ ++ G +
Sbjct: 350 AKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVD 409
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A+ L+ M+ SP +Y L+ G C + + VLK+M ++G P + + ++
Sbjct: 410 DAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 469
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 134/301 (44%), Gaps = 3/301 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I+ D+ +M+ + D YN + GR +A
Sbjct: 285 PNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC--LPDIITYNTLIDGLCKTGRAPEAN 342
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
DM + C P V T++ ++ + + ++ K V D + L++G
Sbjct: 343 RLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 402
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G ++ A +L+E +C P+V TY++L+ G C+ G + EA +L+RM G +
Sbjct: 403 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 462
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ LI + GK KLLE M G G PN +Y+ ++ G EA++++ R
Sbjct: 463 VTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLER 522
Query: 329 M-ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
+ E +Y+ ++ GLC + +L+ + Q G PR ++ ++ + GK
Sbjct: 523 LERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGK 582
Query: 388 D 388
+
Sbjct: 583 E 583
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%)
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C +V T+ ++++ L A E + K G + N+L+ G C+ + A+
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+L E + PNV TYST++HG C + V+ A+ L +M G + VT+N L+SGL
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
+ G ++E +LL+ M+ +G P+ SY ++ GL + A ++ P
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
V+Y LI GLC +++ + +KM + P
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEP 215
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 20/305 (6%)
Query: 35 SPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALY 94
+P A+ D A K + D ++ + ++ F L + I + L ++ P+ +
Sbjct: 338 APEANRLFGDMKA-KFCNPDVITYSCLIGGFCKL-ERIDMARTLFDDMLKQAVLPDVVTF 395
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM 154
+ ++ A D E +++ + V C D + Y + GR+ +A L M
Sbjct: 396 STLVEGYCNAGLVDDAERLLEEM-VASDCS-PDVYTYTSLVDGFCKVGRMVEARRVLKRM 453
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-------GVEIDACCLNILLKG 207
C P+V T+ +++ A G T A KL GV+ + L+ G
Sbjct: 454 AKRGCQPNVVTYTALIDAFCRA-------GKPTVAYKLLEEMVGNGVQPNVITYRSLIGG 506
Query: 208 LCENGNLEAAFYVLDEFPK-QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
C G+LE A +L+ + +NC+ ++ Y +M GLC G + A LLE ++ G
Sbjct: 507 FCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPP 566
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMK-GKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ LI GL + ++ + M++LE M + PN+ +Y+ V+ L + R EA L
Sbjct: 567 RHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANAL 626
Query: 326 VGRMI 330
++
Sbjct: 627 ADELL 631
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 192/415 (46%), Gaps = 52/415 (12%)
Query: 18 SLSSASTITRKR-TFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLR---DPIS 73
S+S A T+T + L PS++ + H+ L+ D +K+ +LR D +
Sbjct: 13 SISQAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTD-------VKLLDSLRSQPDDSA 65
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ + N SK+ +++P ALY I+ +L ++ FD ++ I++ +K + C F +
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSR-CEMGTSTFLIL 124
Query: 134 IKIYGN--MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
I+ Y + I ++ + D + P +N +LNLLV ++ + +
Sbjct: 125 IESYAQFELQDEILSVVDWMID--EFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSV 182
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM----------- 240
G++ D N+L+K LC L A +L++ P P+ +T++T+M
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 241 ------------------------HGLCEKGNVEEAFGLLERMESE-GIDADTVTFNILI 275
HG C++G VE+A ++ M ++ G D TFN L+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+GL K G V+ +++++ M +G P+ +Y V+ GL EA E++ +MI S
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
P+ V+Y LI LC + VE+ + + + +G +P + + ++ + +++R
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 143/306 (46%), Gaps = 2/306 (0%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++ + + S + + P++ + ++N L +A +IM + E D + YN +
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY--DPDVYTYNSV 336
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G + +A+E L M + +C P+ T+N +++ L E + G+
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D C N L++GLC N A + +E + CEP+ TY+ L+ LC KG ++EA
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+L++ME G +T+N LI G K K E ++ + M+ G NS +Y ++ GL
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+R +A +L+ +MI E P +Y L+ C ++ +++ M G P +
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 375 MWREIV 380
+ ++
Sbjct: 577 TYGTLI 582
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 132/248 (53%), Gaps = 4/248 (1%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F YN++ G++ +A+ L M C SV T+N +++ A E + I+
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
GV ++ N L+ GLC++ +E A ++D+ + +P+ TY++L+ C
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G++++A +++ M S G + D VT+ LISGL K G+VE KLL ++ KG +Y
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICE-RMSPSFVSYKKLIHGLCN--QKLVEDVDWVLKK 363
V+ GL K++ EA L M+ + P VSY+ + GLCN + E VD+ L +
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF-LVE 672
Query: 364 MVQQGFVP 371
++++GFVP
Sbjct: 673 LLEKGFVP 680
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 157/349 (44%), Gaps = 38/349 (10%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+E +T ++ + D I +++ VE C +S+ NVI GR+ A+
Sbjct: 222 PDEKTFTTVMQGYIEEGDLDGALRIREQM-VEFGCSWSN-VSVNVIVHGFCKEGRVEDAL 279
Query: 149 ETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +M + + + P TFN ++N L A I + G + D N ++ G
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA--------------- 252
LC+ G ++ A VLD+ ++C PN TY+TL+ LC++ VEEA
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 253 --------------------FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
L E M S+G + D T+N+LI L +GK++E + +L+
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+M+ GC + +Y ++ G + EA+E+ M +S + V+Y LI GLC +
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVDS 401
VED ++ +M+ +G P + ++ G D + + + + S
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 154/328 (46%), Gaps = 8/328 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L P V + ++P+ + + N K + Y +I KL F+A+E+++
Sbjct: 5 LLPKHVAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLA 64
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
++ +G + ++ YG G+I +A++ M +NC PSV+++N ++N+LV
Sbjct: 65 ETRMNIDNGLLEGVYIGAMRNYGR-KGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVE 123
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ + + +Y G+ D I +K C AA +L+ P Q CE +
Sbjct: 124 YRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVA 183
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y T++ G E+ + EA L E M GI D + FN LI L ++G V+E +LL ++
Sbjct: 184 YCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVL 243
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKEL---VGRMICERMSPSFVSYKKLIHGLCNQK 352
+G PN + + G + EA L VGR ++P ++Y LI GLC
Sbjct: 244 KRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR----GLTPDVITYNTLICGLCKNF 299
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V + + L+KMV +G+ P + I+
Sbjct: 300 KVVEAEHYLRKMVNEGYEPDGFTYNSII 327
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 138/297 (46%), Gaps = 3/297 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P+E+ Y +IN L Q D ++ +EK + + N + + G I
Sbjct: 349 KGFVPDESTYCSLINGLCQDGDIDRAINVFNE-AMEKGLK-PNLVLCNTLVKGLSQQGLI 406
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A++ + +M C P + T+NLV+N L + + A G D N L
Sbjct: 407 LQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTL 466
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C+ L+ A ++D P+V TY+++++GLC+ G E+ G + M +G
Sbjct: 467 IDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGC 526
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ +T+NIL K KVEE + L+E M+ KG P+ ++ ++ G D A +
Sbjct: 527 VPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQ 586
Query: 325 LVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L R+ + + S + +Y +I+ + + + + KM + GF P +R ++
Sbjct: 587 LFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMI 643
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P T+N +++ + I A G D L+ GLC++G+++ A V
Sbjct: 318 PDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINV 377
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+E ++ +PN+ +TL+ GL ++G + +A L+ M G D T+N++I+GL K
Sbjct: 378 FNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCK 437
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G V + L+ KG P+ ++ ++ G K + A E+V RM +SP ++
Sbjct: 438 IGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVIT 497
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
Y +++GLC EDV K M+++G VP +
Sbjct: 498 YNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNI 530
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 121/246 (49%), Gaps = 2/246 (0%)
Query: 127 DGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
DGF YN +I Y + G + A + L D P T+ ++N L +
Sbjct: 319 DGFTYNSIIDGYCKL-GMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINV 377
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ A + G++ + N L+KGL + G + A +++E + C P++ TY+ +++GLC+
Sbjct: 378 FNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCK 437
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V +A L+ ++G D TFN LI G K+ K++ +++++RM G P+ +
Sbjct: 438 IGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVIT 497
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y +L GL ++ + M+ + P+ ++Y L C + VE+ ++++M
Sbjct: 498 YNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQ 557
Query: 366 QQGFVP 371
+G P
Sbjct: 558 NKGLTP 563
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 144/303 (47%), Gaps = 4/303 (1%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+ + ++N+ S+ +P+ Y L+IN L + ++++ I D F +
Sbjct: 407 LQALKLMNEMSEN-GCSPDIWTYNLVINGLCKIGCVSDADNLV--IDAIAKGHLPDVFTF 463
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + ++ AIE + M ++ P V T+N +LN L A Y ++ G + +
Sbjct: 464 NTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMME 523
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G + NIL + C+ +E A +++E + P+V + TLM G C+ G+++
Sbjct: 524 KGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDG 583
Query: 252 AFGLLERMESEGIDADTV-TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A+ L +R++ + + T+ T+NI+I+ + + KL +M G P+S +Y+ ++
Sbjct: 584 AYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMI 643
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
G + I + + PS ++ ++++ LC ++ V + ++ MV +G V
Sbjct: 644 DGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIV 703
Query: 371 PRM 373
P +
Sbjct: 704 PEV 706
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 127/292 (43%), Gaps = 3/292 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y I+N L + + FD + R++ + + D + + + R A
Sbjct: 109 PSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGI--VPDVYTFTIRMKSFCRTSRPHAAR 166
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +MPS C S + V+ E ++ LG+ D N L+ L
Sbjct: 167 RLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTL 226
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G+++ + +L++ K+ PN+ T + + G C++ + EA LL+ + G+ D
Sbjct: 227 CRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-GRGLTPDV 285
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+N LI GL K KV E L +M +G P+ +Y ++ G A +++
Sbjct: 286 ITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRD 345
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P +Y LI+GLC ++ V + +++G P + + +V
Sbjct: 346 GAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLV 397
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
++ T+N+++N + ++ + G D+ +++ G C+ GN+ + + L
Sbjct: 600 TIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFL 659
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
++ P++ T+ +++ LC K V EA G++ M +GI + V N + +K+
Sbjct: 660 LVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV--NTIFEADKKE 717
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
V ++E + KG + +Y+ + G+ DKK
Sbjct: 718 --VAAPKIVVENLMKKG-HITYFAYEILHDGIRDKK 750
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 155/305 (50%), Gaps = 4/305 (1%)
Query: 64 IFSNLR--DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK 121
+ +N R D V + SK + PN Y+++I+ L +A R + + Q + VEK
Sbjct: 170 VLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEM-VEK 228
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
C+ S + +IK ++ G KA++ L +M + C P+V T+ ++++ L E
Sbjct: 229 GCQPSTRTYTVLIKAKCDI-GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 287
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
G++ K G+ N L+ G C+ G + +AF +L K NC+PN+RTY+ LM
Sbjct: 288 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 347
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GLC +AF LL R+ G+ D VT+NIL+ G K+G++ + M G P
Sbjct: 348 GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 407
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ ++ ++ GL R +A ++G M+ + +S V++ LI G C +DV ++
Sbjct: 408 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 467
Query: 362 KKMVQ 366
+ MV+
Sbjct: 468 ENMVE 472
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 40/274 (14%)
Query: 101 LAQAKRFDAIED--IMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKAIETLFDMPSY 157
LA +R D E + +++ E+ CR + Y+++ I+G AGR+ +A + +M
Sbjct: 171 LANCRRDDLGEAFRVFEKMSKEESCR-PNSVTYSIL-IHGLCEAGRLEEAFQLKQEMVEK 228
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
C PS +T+ +L+K C+ G + A
Sbjct: 229 GCQPSTRTYT-----------------------------------VLIKAKCDIGMTDKA 253
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+LDE + C PNV TY+ L+ LC +G +EEA G+ +M G+ +TFN LI+G
Sbjct: 254 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 313
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
K+G V +LL M+ C PN +Y E++ GL + +A L+ R++ + P
Sbjct: 314 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPD 373
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
V+Y L+ G C + + + M G P
Sbjct: 374 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 407
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNV 249
+LG +D L+ C +L AF V ++ K+ +C PN TYS L+HGLCE G +
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRL 215
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EEAF L + M +G T T+ +LI G ++ MK+L+ M K C PN +Y +
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ L + + EA + +M+ + P +++ LI+G C + V +L M +
Sbjct: 276 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 335
Query: 370 VPRMGMWREIV 380
P + + E++
Sbjct: 336 KPNIRTYNELM 346
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 130/322 (40%), Gaps = 44/322 (13%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +T +I+ L + R + I+ + V+K + F +I + +I KA
Sbjct: 407 PDGFTFTALIDGLCKLGRLEQANGILGSM-VKKGISLDEVTFTALIDGHC----KIGKAK 461
Query: 149 ETLF---DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+ F +M C + TFN L+ L E + K G+ IL+
Sbjct: 462 DVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 521
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
+G C G + +L+ + C PNV TY+ +++GLC G VEEA +L M S G+
Sbjct: 522 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 581
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ T+ +L+ K G+++ +++ M GC PNS Y +L G + A+ L
Sbjct: 582 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 641
Query: 326 --VGRMICERMS----------------------------------PSFVSYKKLIHGLC 349
G + +S P+ Y L+ GLC
Sbjct: 642 SSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLC 701
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
+ + + D + + MV+ G P
Sbjct: 702 KEGRIIEADQLTQDMVKHGLFP 723
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 128/298 (42%), Gaps = 2/298 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
++ + PN Y ++ L + + +++R+ L D YN++ G
Sbjct: 331 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL--LPDRVTYNILVDGFCKEG 388
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+++ A M S P TF +++ L + GI S K G+ +D
Sbjct: 389 QLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT 448
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G + ++ + + C T++ + L + + EA +L +M
Sbjct: 449 ALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY 508
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ VT ILI G + G+ +K+LERMK GC PN +Y ++ GL + R EA
Sbjct: 509 GLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 568
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++ M +SP+ +Y L+ ++ ++ MV+ G P ++ ++
Sbjct: 569 ETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 626
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 133/320 (41%), Gaps = 59/320 (18%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KDY NEA ++ K+ + ++ + I +E CR AG
Sbjct: 491 KDYKLNEA--NAMLGKMMKYGLVPSV--VTHTILIEGHCR----------------AGET 530
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ +++ L M C P+V T+ +++N L + E + I S + GV + +L
Sbjct: 531 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 590
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG------------LCEKG----- 247
+K + G L+ AF ++ K C+PN YS L+ G L G
Sbjct: 591 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDAR 650
Query: 248 --------------------NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
+V+ A + + ++ G+ + + +N L+ GL K+G++ E
Sbjct: 651 SLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-YNFLVVGLCKEGRIIEA 709
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+L + M G +P+ A ++ ++ E + ++ + PSF SY +IHG
Sbjct: 710 DQLTQDMVKHGLFPDKA-ISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHG 768
Query: 348 LCNQKLVEDVDWVLKKMVQQ 367
L N+ V++ ++ +V+
Sbjct: 769 LRNEGRVQEAQKLVSDLVRH 788
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 36/181 (19%)
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE---------- 285
YSTL+ L + AF + RM +EG + + +++ L K G V+
Sbjct: 96 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155
Query: 286 -------------------------EGMKLLERM-KGKGCYPNSASYQEVLYGLLDKKRF 319
E ++ E+M K + C PNS +Y +++GL + R
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRL 215
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA +L M+ + PS +Y LI C+ + + +L +M + VP + + +
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275
Query: 380 V 380
+
Sbjct: 276 I 276
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 168/318 (52%), Gaps = 14/318 (4%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
++S + + RDP + + N+ S++K +N N A Y+++++ L + K+F A++ I+
Sbjct: 54 FISHESTVSLMKRERDPQRALDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAIL 113
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY--NCWPSVKTFNLVLNL 172
++K E CRF + F N+++ + + + +F++ PS+ + LNL
Sbjct: 114 HQMKYET-CRFQESLFLNLMRHFSRF--DLHDKVMEMFNLIQVIARVKPSLNAISTCLNL 170
Query: 173 LVSAKLYGEI----QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
L+ + GE+ + + + L ++ + C NIL+K C+NG++++AF V++E +
Sbjct: 171 LIDS---GEVDLARKLLLYAKHNLALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSG 227
Query: 229 CE-PNVRTYSTLMHGLCEKGNVEEAFGLLERMESE-GIDADTVTFNILISGLRKQGKVEE 286
PN TYSTLM L + +EA L E M S+ GI D V FN++I+G + G+VE
Sbjct: 228 ISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVER 287
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+L+ MK GC PN +Y ++ G + + EAK++ + + V Y L++
Sbjct: 288 AKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMN 347
Query: 347 GLCNQKLVEDVDWVLKKM 364
LC +++ +L +M
Sbjct: 348 CLCRNGEIDEAMKLLGEM 365
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 131/253 (51%), Gaps = 2/253 (0%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+N++ + G I A + +M S +P+ T++ +++ L + E ++
Sbjct: 199 IFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFED 258
Query: 189 A-AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+K G+ D N+++ G C +G +E A +LD K C PNV YS LM+G C++G
Sbjct: 259 MISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEG 318
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++EA + + ++ G+ DTV + L++ L + G+++E MKLL MK C ++ +Y
Sbjct: 319 KIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYN 378
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+L GL + R EA +++ + CE + + SY+ +++ LC +E L M ++
Sbjct: 379 VILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKR 438
Query: 368 GFVPRMGMWREIV 380
G P W E+V
Sbjct: 439 GIWPHHATWNELV 451
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 144/317 (45%), Gaps = 5/317 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN ++ +++ + D+ +++ +K + + + Y+ + R +A+
Sbjct: 195 PNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGI-SYPNSITYSTLMDCLFAQSRSKEAV 253
Query: 149 ETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E DM S P FN+++N + + I K G + + L+ G
Sbjct: 254 ELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNG 313
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G ++ A V DE K + + Y+TLM+ LC G ++EA LL M++ AD
Sbjct: 314 FCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRAD 373
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+N+++ GL +G+ EE +++L++ +G + N SY+ +L L +A + +
Sbjct: 374 ALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLS 433
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
M + P ++ +L+ LC E VL + G +P W +V +
Sbjct: 434 VMSKRGIWPHHATWNELVVRLCESGNTEIGVRVLIGFLGIGLIPAPKSWGAVVESIC--- 490
Query: 388 DNRNRVYVTETVDSLAS 404
R V+V E +DSLAS
Sbjct: 491 KERKLVHVFELLDSLAS 507
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 177/348 (50%), Gaps = 18/348 (5%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
++P ++ K+ D +++ + + +K Y +Y + INKL +F I+ ++
Sbjct: 77 ITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLM 136
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFNLVLNLLV 174
++K E + F + F ++K YG AG+ +AI L DM + Y C P+ K+++LVL +LV
Sbjct: 137 QMKEEGIV-FRESIFMIIMKHYGK-AGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILV 194
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
+ ++ GV I++K LC +++A +L + K C PN
Sbjct: 195 TGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSI 254
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y TL+H L +K V EA LLE M G D TFN +I GL K K+ + KL++RM
Sbjct: 255 VYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRM 314
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG-LCNQKL 353
+G YP++ +Y +L+GL + EA++++ ++ C P+ LI+G + + +L
Sbjct: 315 LLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQL 370
Query: 354 VEDVDWVLKKMVQQGFVPRM--------GMWREIVGCVTFGKDNRNRV 393
E ++ + M+ GF P + G+ +E G ++F +D N +
Sbjct: 371 KEAQSFLNETMINFGFQPDIFTYNILMHGLCKE--GSLSFARDLVNEM 416
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 142/295 (48%), Gaps = 7/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS---DGFFYNVIKIYGNMAGRIS 145
PN A+ +IN + + + + E + F D F YN++ G +S
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLN----ETMINFGFQPDIFTYNILMHGLCKEGSLS 407
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A + + +M C P+V T+ +++N L A L E + + G+ I++ N L+
Sbjct: 408 FARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC + A +L E + C+P++ TY++L++GLC+ ++EAF L M +G
Sbjct: 468 CALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAV 527
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
A+ VT+N LI L ++G ++ + L+ M +GC + +Y ++ + EL
Sbjct: 528 ANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLEL 587
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+MI + + +S +I+GLC V++ L+ + +GFVP + + ++
Sbjct: 588 YEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVL 642
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 144/321 (44%), Gaps = 3/321 (0%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
++N+ S+R PN Y +++N L +A + ++ + L + YN +
Sbjct: 412 LVNEMSRR-GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLT--INSVIYNCLIC 468
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
++ A+ L +M + C P + T+N ++ L E ++ + G
Sbjct: 469 ALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVA 528
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ N L+ L G + A ++++ + C + TY+ L+ C+ GN+E+ L
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E+M +G+ ADT++ NI+I+GL K GKV+ + L +G P+ +Y VL GL
Sbjct: 589 EQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
R EA L R+ E + P +Y I C + +V D + ++ GFVP W
Sbjct: 649 GRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTW 708
Query: 377 REIVGCVTFGKDNRNRVYVTE 397
+V + + N +V +
Sbjct: 709 NVLVYTLLKQSNQENNFFVLD 729
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 61/154 (39%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G I K +E M + N+++N L A G D
Sbjct: 578 VGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVT 637
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N +L GLC+ G ++ A + D + P+ TY+T + C++G V +A R
Sbjct: 638 YNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGI 697
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
G +T+N+L+ L KQ E +L+ +
Sbjct: 698 ENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 154/307 (50%), Gaps = 3/307 (0%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ VL++ +R Y P+ YT++I + ++ ++ ++ C D YNV
Sbjct: 223 AMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGQAMKLLDEMR-DRGCT-PDVVTYNV 279
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ GR+ +AI+ L DMPS C P+V T N++L + S + + + + + G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
NIL+ LC G L A +L++ PK C+PN +Y+ L+HG C++ ++ A
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
LERM S G D VT+N +++ L K GKVE+ +++L ++ KGC P +Y V+ GL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ +A +L+ M + + P ++Y L+ GL + V++ + + G P
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNA 519
Query: 374 GMWREIV 380
+ I+
Sbjct: 520 VTFNSIM 526
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 162/351 (46%), Gaps = 13/351 (3%)
Query: 44 DHHAYKLNHKDWLSPTEVLKIFSNL---RDPISVISVLNQYSKRKDYNPNEALYTLIINK 100
++ Y N D + T +++ F + R ++ VL P+ Y ++I+
Sbjct: 126 ENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAV----PDVITYNVMISG 181
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCW 160
+A + ++ R+ V D YN I +G++ +A+E L M +C+
Sbjct: 182 YCKAGEINNALSVLDRMSVS-----PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+ +++ G+ + G D N+L+ G+C+ G L+ A
Sbjct: 237 PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L++ P C+PNV T++ ++ +C G +A LL M +G VTFNILI+ L +
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G + + +LE+M GC PNS SY +L+G +K+ A E + RM+ P V+
Sbjct: 357 KGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNR 390
Y ++ LC VED +L ++ +G P + + ++ G GK +
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 16/290 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK---IYGNM--AGR 143
P+ Y +++N + + R D + + S G NVI I +M GR
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMP-------SSGCQPNVITHNIILRSMCSTGR 324
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
A + L DM PSV TFN+++N L L G I K G + ++ N
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNP 384
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL G C+ ++ A L+ + C P++ TY+T++ LC+ G VE+A +L ++ S+G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+T+N +I GL K GK + +KLL+ M+ K P++ +Y ++ GL + + EA
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 324 ELVGRMICERMS--PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ ERM P+ V++ ++ GLC + + L M+ +G P
Sbjct: 505 KFFHEF--ERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKP 552
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 137/289 (47%), Gaps = 12/289 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-----FYNVIKIYGNMAGR 143
PN + +I+ + R+ E ++ + GF +N++ + G
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADM-------LRKGFSPSVVTFNILINFLCRKGL 359
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +AI+ L MP + C P+ ++N +L+ K G D N
Sbjct: 360 LGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L LC++G +E A +L++ + C P + TY+T++ GL + G +A LL+ M ++
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ DT+T++ L+ GL ++GKV+E +K + G PN+ ++ ++ GL ++ A
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAI 539
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+ + MI P+ SY LI GL + + ++ +L ++ +G + R
Sbjct: 540 DFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKR 588
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 3/176 (1%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L+ L G LE F L+ P++ +TL+ G C G +A +LE +E G
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+N++ISG K G++ + +L+RM P+ +Y +L L D + +A E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ RM+ P ++Y LI C V +L +M +G P + + +V
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLV 281
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 2/219 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ + K+ D + ++R+ V + C + D YN + G++ A+
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERM-VSRGC-YPDIVTYNTMLTALCKDGKVEDAV 434
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L + S C P + T+N V++ L A G+ + ++ D + L+ GL
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
G ++ A EF + PN T++++M GLC+ + A L M + G
Sbjct: 495 SREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTE 554
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ ILI GL +G +E ++LL + KG S++ Q
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSAEQ 593
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 177/348 (50%), Gaps = 18/348 (5%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
++P ++ K+ D +++ + + +K Y +Y + INKL +F I+ ++
Sbjct: 77 ITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLM 136
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFNLVLNLLV 174
++K E + F + F ++K YG AG+ +AI L DM + Y C P+ K+++LVL +LV
Sbjct: 137 QMKEEGIV-FRESIFMIIMKHYGK-AGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILV 194
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
+ ++ GV I++K LC +++A +L + K C PN
Sbjct: 195 TGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSI 254
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y TL+H L +K V EA LLE M G D TFN +I GL K K+ + KL++RM
Sbjct: 255 VYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRM 314
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG-LCNQKL 353
+G YP++ +Y +L+GL + EA++++ ++ C P+ LI+G + + +L
Sbjct: 315 LLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQL 370
Query: 354 VEDVDWVLKKMVQQGFVPRM--------GMWREIVGCVTFGKDNRNRV 393
E ++ + M+ GF P + G+ +E G ++F +D N +
Sbjct: 371 KEAQSFLNETMINFGFQPDIFTYNILMHGLCKE--GSLSFARDLVNEM 416
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 142/295 (48%), Gaps = 7/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS---DGFFYNVIKIYGNMAGRIS 145
PN A+ +IN + + + + E + F D F YN++ G +S
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLN----ETMINFGFQPDIFTYNILMHGLCKEGSLS 407
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A + + +M C P+V T+ +++N L A L E + + G+ I++ N L+
Sbjct: 408 FARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC + A +L E + C+P++ TY++L++GLC+ ++EAF L M +G
Sbjct: 468 CALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAV 527
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
A+ VT+N LI L ++G ++ + L+ M +GC + +Y ++ + EL
Sbjct: 528 ANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLEL 587
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+MI + + +S +I+GLC V++ L+ + +GFVP + + ++
Sbjct: 588 YEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVL 642
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 144/321 (44%), Gaps = 3/321 (0%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
++N+ S+R PN Y +++N L +A + ++ + L + YN +
Sbjct: 412 LVNEMSRR-GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLT--INSVIYNCLIC 468
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
++ A+ L +M + C P + T+N ++ L E ++ + G
Sbjct: 469 ALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVA 528
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ N L+ L G + A ++++ + C + TY+ L+ C+ GN+E+ L
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E+M +G+ ADT++ NI+I+GL K GKV+ + L +G P+ +Y VL GL
Sbjct: 589 EQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
R EA L R+ E + P +Y I C + +V D + ++ GFVP W
Sbjct: 649 GRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTW 708
Query: 377 REIVGCVTFGKDNRNRVYVTE 397
+V + + N +V +
Sbjct: 709 NVLVYTLLKQSNQENNFFVLD 729
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 61/154 (39%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G I K +E M + N+++N L A G D
Sbjct: 578 VGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVT 637
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N +L GLC+ G ++ A + D + P+ TY+T + C++G V +A R
Sbjct: 638 YNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGI 697
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
G +T+N+L+ L KQ E +L+ +
Sbjct: 698 ENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
>gi|255580552|ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529296|gb|EEF31265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 483
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 178/339 (52%), Gaps = 14/339 (4%)
Query: 29 RTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSK---RK 85
+T LA P +Q H + +D V ++ DP +S+ + Y + R
Sbjct: 24 KTLGLAKPRKGNQKHQHFTRR-QRRDIPFVNNVKEV----EDPDKALSLFHDYLQNGFRH 78
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
DY P+ Y+ ++ KLA+++RF+A+E ++ ++ + R D F + + YG + G ++
Sbjct: 79 DY-PS---YSALVYKLARSRRFEAVETVLGYLQDFNV-RCRDTLFIALFEHYGKV-GLVA 132
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KAI +M +NC ++++FN +LN+LV + + ++ ++++G +++ NIL+
Sbjct: 133 KAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQLFDRSSEMGFRLNSVPFNILI 192
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
KG + G A V DE ++ EP+V TY++L+ LC G + +A GL + M +G
Sbjct: 193 KGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGELGKAKGLFKDMIKKGKR 252
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ VT+ +L+ GL G+ +E K+L M+ +GC P + ++ ++ L K + EAK L
Sbjct: 253 PNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVLMNDLGKKGKIEEAKLL 312
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+ M R P V Y LI+ LC + V + L +M
Sbjct: 313 LLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEM 351
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 110/222 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PSV T+N ++ L G+ +G++ K G +A +L++GLC G + A +
Sbjct: 218 PSVVTYNSLIGYLCRNGELGKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKM 277
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + + C+P + LM+ L +KG +EEA LL M+ D V +NILI+ L K
Sbjct: 278 LFDMEYRGCKPKNLNFGVLMNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCK 337
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+GKV E K L M+ GC N+A+Y+ + G F E +++ M+ R +P +
Sbjct: 338 EGKVAEAYKTLFEMQIGGCEANAATYRMLADGFCQVGEFEEGLKVLNAMLVSRHAPRIET 397
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
+ + GL ++ +VL++M ++ W +V C
Sbjct: 398 FNCFVVGLMKSGSIDGAFFVLEEMEKRKMALDSDGWEALVRC 439
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN + Y G + KA DM P+ T+ L++ L S Y E + +
Sbjct: 223 YNSLIGYLCRNGELGKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDME 282
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G + +L+ L + G +E A +L E K+ P+V Y+ L++ LC++G V
Sbjct: 283 YRGCKPKNLNFGVLMNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVA 342
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA+ L M+ G +A+ T+ +L G + G+ EEG+K+L M P ++ +
Sbjct: 343 EAYKTLFEMQIGGCEANAATYRMLADGFCQVGEFEEGLKVLNAMLVSRHAPRIETFNCFV 402
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
GL+ A ++ M +M+ ++ L+ C++
Sbjct: 403 VGLMKSGSIDGAFFVLEEMEKRKMALDSDGWEALVRCCCSE 443
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 4/177 (2%)
Query: 200 CLNILLKGLCEN----GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
C + L L E+ G + A + +E NC +++++ L++ L + + +A L
Sbjct: 113 CRDTLFIALFEHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQL 172
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+R G ++V FNILI G K+G+ + K+ + M + P+ +Y ++ L
Sbjct: 173 FDRSSEMGFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCR 232
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+AK L MI + P+ V+Y L+ GLC+ ++ +L M +G P+
Sbjct: 233 NGELGKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPK 289
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 4/144 (2%)
Query: 232 NVRTYSTLMHGLCEK----GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
NVR TL L E G V +A L M +FN L++ L ++ +
Sbjct: 110 NVRCRDTLFIALFEHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDA 169
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+L +R G NS + ++ G L K + +A ++ M+ ++ PS V+Y LI
Sbjct: 170 KQLFDRSSEMGFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGY 229
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVP 371
LC + + K M+++G P
Sbjct: 230 LCRNGELGKAKGLFKDMIKKGKRP 253
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 74/187 (39%), Gaps = 37/187 (19%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P + +++N L + + + + ++ +K + D YN++ + G++++A
Sbjct: 288 PKNLNFGVLMNDLGKKGKIEEAKLLLLEMKKRRF--RPDVVIYNILINHLCKEGKVAEAY 345
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+TLF+M C E +A +L G
Sbjct: 346 KTLFEMQIGGC-----------------------------------EANAATYRMLADGF 370
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G E VL+ P + T++ + GL + G+++ AF +LE ME + D+
Sbjct: 371 CQVGEFEEGLKVLNAMLVSRHAPRIETFNCFVVGLMKSGSIDGAFFVLEEMEKRKMALDS 430
Query: 269 VTFNILI 275
+ L+
Sbjct: 431 DGWEALV 437
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 176/386 (45%), Gaps = 30/386 (7%)
Query: 25 ITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKR 84
+ K + L+SP H H L+ K L P V+ I ++ SV+ S+R
Sbjct: 50 LVSKISTILSSPKWEHSSELCH---LSPK--LKPHHVVNILQTHKNTDSVLRFFFWISRR 104
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR- 143
K + + + + ++N+L + + F + + RI + K CR ++G V + + +
Sbjct: 105 KFFKHDMSCFVSMLNRLVRDRLFAPADHV--RILMIKSCR-NEGEVKRVTQFLSEINSKY 161
Query: 144 ---------------------ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
+ A + M + PS+ TFN ++N+L E
Sbjct: 162 DFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEA 221
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ I + + +A L+ G C N NL+ AF + D K C+PN TYSTL++G
Sbjct: 222 KLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLING 281
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC +G +EEA +LE M +GI+ T+ I + L G E ++LL +MK +GC PN
Sbjct: 282 LCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPN 341
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
++ ++ GL +F A L +M+ + + P+ V+Y LI+ LC + E + K
Sbjct: 342 IQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFK 401
Query: 363 KMVQQGFVPRMGMWREIVGCVTFGKD 388
M+ G +P + EI+ C D
Sbjct: 402 WMLSHGSLPSTQTYNEIIKCFCLMGD 427
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 142/302 (47%), Gaps = 4/302 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y+ +IN L R + D+++ + V+K + Y + + AG S+A
Sbjct: 269 DPNSVTYSTLINGLCSEGRLEEAMDMLEEM-VQKGIE-PTVYTYTIPLVSLCDAGCSSEA 326
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E L M C P+++TF +++ L + G+Y G+ N L+
Sbjct: 327 VELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQ 386
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC G E AF + P+ +TY+ ++ C G++++A + ++M G +
Sbjct: 387 LCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPN 446
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+N LI G KQG + M+LLE MKG G P++ +Y E++ G + A L
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
M+ +SP+ V+Y +I G N V+D + KMV+ G +P + ++ F K
Sbjct: 507 GMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMIS--GFSK 564
Query: 388 DN 389
N
Sbjct: 565 TN 566
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 8/301 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K++ PN +T +I+ L++ +F+ + ++ + L YN + + G
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL--VPTTVTYNALINQLCVEG 391
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDAC 199
R A M S+ PS +T+N ++ L G+IQ I+ K G +
Sbjct: 392 RFETAFTIFKWMLSHGSLPSTQTYNEIIKCFC---LMGDIQKAMVIFDKMLKAGSSPNVI 448
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ G C+ GNL A +L+ +P+ TY+ L+ G G +E A L M
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
GI + VT+ +I G KV++ + L +M G P+S +Y ++ G
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA+ G+M+ + + P+ ++Y I GLC + +M ++ + P + + +
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Query: 380 V 380
+
Sbjct: 629 I 629
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 138/303 (45%), Gaps = 8/303 (2%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
NL + + ++ ++ K P+ YT +I+ ++ + + + + +E +
Sbjct: 462 NLNNAMRLLEIM----KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM-MEHGISPN 516
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+ +I Y N+A ++ A+ + M PS +T+N++++ E +
Sbjct: 517 HVTYTAIIDGYFNLA-KVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFC 575
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
K G+ + + GLC NG AF + E K+N PN+ TYS+L++GLC++
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQE 635
Query: 247 GNVEEA--FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
G E+A + LL R+ G + + T+ L+ GL +G+ E +L+ M+ KG P+
Sbjct: 636 GRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEE 695
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
Y+ +L G + A + M YK LI LC + +E+ + + M
Sbjct: 696 IYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTM 755
Query: 365 VQQ 367
+++
Sbjct: 756 LEK 758
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 138/323 (42%), Gaps = 5/323 (1%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E++K F + D + + ++ K +PN Y +I + + +++ +K
Sbjct: 417 EIIKCFCLMGDIQKAMVIFDKMLKAGS-SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKG 475
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
L D + Y + + G++ A + M + P+ T+ +++ +
Sbjct: 476 NGL--KPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKV 533
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ ++ + G + N+++ G + ++ A + KQ PNV TY++
Sbjct: 534 DDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSF 593
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE--EGMKLLERMKGK 297
+ GLC G AF + ME + T++ LI GL ++G+ E E LL R+
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
GC PN +Y ++ GL + R EA +LV M + + PS Y+ L+ G C VE
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713
Query: 358 DWVLKKMVQQGFVPRMGMWREIV 380
+ M GF + ++ ++
Sbjct: 714 LNIFYSMDTLGFQLHLSDYKALI 736
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 6/221 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
PN YT I+ L + R I ++EK F + + Y+ + IYG GR A
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFH--EMEKRNYFPNLYTYSSL-IYGLCQEGRAEDA 641
Query: 148 --IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
L + Y C P+V T+ ++ L E + S K G++ LL
Sbjct: 642 EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C+N +E+A + + ++ Y L+ LC++ +EEA + + M + +
Sbjct: 702 IGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWN 761
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+D V + +L+ GL K+G+ + +KLL M+ + C N +Y
Sbjct: 762 SDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 22/267 (8%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL-------CRFSDGFFYNVIKIYGNMA 141
P+ Y ++I+ ++ E+ ++ + L F DG N
Sbjct: 550 PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRN--------- 600
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKL---GVEID 197
GR A + +M N +P++ T++ L+ L + E +Y A+L G E +
Sbjct: 601 GRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR--AEDAEMYNLLARLTHYGCEPN 658
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
L+KGLC G A ++ K+ +P+ Y L+ G C+ VE A +
Sbjct: 659 VDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFY 718
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M++ G + LI L K+ +EE + + M K + ++ +L GLL +
Sbjct: 719 SMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEG 778
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKL 344
+L+ M + +F +Y L
Sbjct: 779 ETDLCLKLLHVMESRNCTLNFQTYVML 805
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 176/386 (45%), Gaps = 30/386 (7%)
Query: 25 ITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKR 84
+ K + L+SP H H L+ K L P V+ I ++ SV+ S+R
Sbjct: 50 LVSKISTILSSPKWEHSSELCH---LSPK--LKPHHVVNILQTHKNTDSVLRFFFWISRR 104
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR- 143
K + + + + ++N+L + + F + + RI + K CR ++G V + + +
Sbjct: 105 KFFKHDMSCFVSMLNRLVRDRLFAPADHV--RILMIKSCR-NEGEVKRVTQFLSEINSKY 161
Query: 144 ---------------------ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
+ A + M + PS+ TFN ++N+L E
Sbjct: 162 DFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEA 221
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ I + + +A L+ G C N NL+ AF + D K C+PN TYSTL++G
Sbjct: 222 KLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLING 281
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC +G +EEA +LE M +GI+ T+ I + L G E ++LL +MK +GC PN
Sbjct: 282 LCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPN 341
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
++ ++ GL +F A L +M+ + + P+ V+Y LI+ LC + E + K
Sbjct: 342 IQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFK 401
Query: 363 KMVQQGFVPRMGMWREIVGCVTFGKD 388
M+ G +P + EI+ C D
Sbjct: 402 WMLSHGSLPSTQTYNEIIKCFCLMGD 427
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 136/284 (47%), Gaps = 2/284 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y+ +IN L R + D+++ + V+K + Y + + AG S+A
Sbjct: 269 DPNSVTYSTLINGLCSEGRLEEAMDMLEEM-VQKGIE-PTVYTYTIPLVSLCDAGCSSEA 326
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E L M C P+++TF +++ L + G+Y G+ N L+
Sbjct: 327 VELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQ 386
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC G E AF + P+ +TY+ ++ C G++++A + ++M G +
Sbjct: 387 LCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPN 446
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+N LI G KQG + M+LLE MKG G P++ +Y E++ G + A L
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ +SP+ V+Y +I G N V+D + KMV+ G +P
Sbjct: 507 GMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLP 550
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 8/301 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K++ PN +T +I+ L++ +F+ + ++ + L YN + + G
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL--VPTTVTYNALINQLCVEG 391
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDAC 199
R A M S+ PS +T+N ++ L G+IQ I+ K G +
Sbjct: 392 RFETAFTIFKWMLSHGSLPSTQTYNEIIKCFC---LMGDIQKAMVIFDKMLKAGSSPNVI 448
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ G C+ GNL A +L+ +P+ TY+ L+ G G +E A L M
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
GI + VT+ +I G KV++ + L +M G P+S +Y ++ G
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA+ G+M+ + + P+ ++Y I GLC + +M ++ + P + + +
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Query: 380 V 380
+
Sbjct: 629 I 629
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 141/312 (45%), Gaps = 8/312 (2%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
NL + + ++ ++ K P+ YT +I+ ++ + + + + +E +
Sbjct: 462 NLNNAMRLLEIM----KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM-MEHGISPN 516
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+ +I Y N+A ++ A+ + M PS +T+N++++ E +
Sbjct: 517 HVTYTAIIDGYFNLA-KVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFC 575
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
K G+ + + GLC NG AF + E K+N PN+ TYS+L++GLC++
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQE 635
Query: 247 GNVEEA--FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
G E+A + LL R+ G + + T+ L+ GL +G+ E +L+ M+ KG P+
Sbjct: 636 GRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEE 695
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
Y+ +L G + A + M YK LI LC + +E+ + + M
Sbjct: 696 IYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTM 755
Query: 365 VQQGFVPRMGMW 376
+++ + +W
Sbjct: 756 LEKHWNSDEVVW 767
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 138/323 (42%), Gaps = 5/323 (1%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E++K F + D + + ++ K +PN Y +I + + +++ +K
Sbjct: 417 EIIKCFCLMGDIQKAMVIFDKMLKAGS-SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKG 475
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
L D + Y + + G++ A + M + P+ T+ +++ +
Sbjct: 476 NGL--KPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKV 533
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ ++ + G + N+++ G + ++ A + KQ PNV TY++
Sbjct: 534 DDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSF 593
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE--EGMKLLERMKGK 297
+ GLC G AF + ME + T++ LI GL ++G+ E E LL R+
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
GC PN +Y ++ GL + R EA +LV M + + PS Y+ L+ G C VE
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713
Query: 358 DWVLKKMVQQGFVPRMGMWREIV 380
+ M GF + ++ ++
Sbjct: 714 LNIFYSMDTLGFQLHLSDYKALI 736
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 6/221 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
PN YT I+ L + R I ++EK F + + Y+ + IYG GR A
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFH--EMEKRNYFPNLYTYSSL-IYGLCQEGRAEDA 641
Query: 148 --IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
L + Y C P+V T+ ++ L E + S K G++ LL
Sbjct: 642 EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C+N +E+A + + ++ Y L+ LC++ +EEA + + M + +
Sbjct: 702 IGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWN 761
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+D V + +L+ GL K+G+ + +KLL M+ + C N +Y
Sbjct: 762 SDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 22/267 (8%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL-------CRFSDGFFYNVIKIYGNMA 141
P+ Y ++I+ ++ E+ ++ + L F DG N
Sbjct: 550 PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRN--------- 600
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKL---GVEID 197
GR A + +M N +P++ T++ L+ L + E +Y A+L G E +
Sbjct: 601 GRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR--AEDAEMYNLLARLTHYGCEPN 658
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
L+KGLC G A ++ K+ +P+ Y L+ G C+ VE A +
Sbjct: 659 VDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFY 718
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M++ G + LI L K+ +EE + + M K + + +L GLL +
Sbjct: 719 SMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEG 778
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKL 344
+L+ M + +F +Y L
Sbjct: 779 ETDLCLKLLHVMESRNCTLNFQTYVML 805
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 155/298 (52%), Gaps = 5/298 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ YT ++ L AKR++ +E++ + +EK C ++ F +++ + G + +
Sbjct: 277 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEM-MEKNCMPNEVTFDMLVRFFCR-GGMVER 334
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
AI+ L M + C + N+V+N + + + G D +LK
Sbjct: 335 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 394
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC E A +L E ++NC PN T++T + LC+KG +E+A L+E+M G +
Sbjct: 395 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 454
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ VT+N L++G QG+V+ ++L M C PN+ +Y +L GL + +R A EL+
Sbjct: 455 NIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELL 511
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
M+ + +P+ V++ L+ C + L+++ ++++M++ G P + + ++ +T
Sbjct: 512 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 569
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 140/294 (47%), Gaps = 30/294 (10%)
Query: 89 PNEALYTLIINKLAQAKR----FDAIEDIMQR----------IKVEKLCRFSDGFFYNVI 134
P+ YT II L R ++D++ R + +E +C+ S GF
Sbjct: 174 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK-STGF----- 227
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+A+E L +M + C P++ T+N+++N + + + + G
Sbjct: 228 ----------GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGF 277
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ D +LKGLC E + E ++NC PN T+ L+ C G VE A
Sbjct: 278 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQ 337
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+LE+M G A+T NI+I+ + KQG+V++ + L M GC P++ SY VL GL
Sbjct: 338 VLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLC 397
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+R+ +AKEL+ M+ + P+ V++ I LC + L+E ++++M + G
Sbjct: 398 RAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 451
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 119/231 (51%), Gaps = 15/231 (6%)
Query: 141 AGRISKAIE---TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
A R+ +A E T D+ +YN L+ YG++ A + V D
Sbjct: 128 AARVLRAAERSGTAVDVFAYN------------TLVAGYCRYGQLDAARRLIASMPVAPD 175
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A +++GLC+ G + A +LD+ + C+P+V TY+ L+ +C+ +A +L+
Sbjct: 176 AYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 235
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M ++G + VT+N++I+G+ ++G+V++ + L R+ G P++ SY VL GL K
Sbjct: 236 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 295
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
R+ + +EL M+ + P+ V++ L+ C +VE VL++M G
Sbjct: 296 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 346
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 6/306 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I VL Q S N L ++IN + + R D + + D Y +
Sbjct: 336 IQVLEQMSGH-GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC--SPDTISYTTV 392
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
A R A E L +M NC P+ TFN + +L L + + ++ G
Sbjct: 393 LKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 452
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E++ N L+ G C G +++A + P C+PN TY+TL+ GLC ++ A
Sbjct: 453 EVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAE 509
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL M + + VTFN+L+S ++G ++E ++L+E+M GC PN +Y +L G+
Sbjct: 510 LLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 569
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
EA EL+ ++ +SP V+Y +I L + VE+ + + G P+
Sbjct: 570 KDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAV 629
Query: 375 MWREIV 380
++ +I+
Sbjct: 630 IYNKIL 635
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ +A + G +D N L+ G C G L+AA ++ P P+ TY+ ++ GLC
Sbjct: 131 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLC 187
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G V EA LL+ M G VT+ +L+ + K + M++L+ M+ KGC PN
Sbjct: 188 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 247
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ G+ + R +A+E + R+ P VSY ++ GLC K EDV+ + +M
Sbjct: 248 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 307
Query: 365 VQQGFVP 371
+++ +P
Sbjct: 308 MEKNCMP 314
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 142/296 (47%), Gaps = 7/296 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK+ PNE + I L Q + +++++ E C + YN + + GR
Sbjct: 414 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS-EHGCEV-NIVTYNALVNGFCVQGR 471
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+E + MP C P+ T+ +L L +A+ + + + N+
Sbjct: 472 VDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 528
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C+ G ++ A ++++ + C PN+ TY+TL+ G+ + N EEA LL + S G
Sbjct: 529 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 588
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D VT++ +I L ++ +VEE +K+ ++ G P + Y ++L L + A
Sbjct: 589 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 648
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR--MGMWR 377
+ M+ P+ ++Y LI GL N+ +++ +L+++ +G + + + WR
Sbjct: 649 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLLEEWR 704
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 5/278 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++ + + DA ++ + V D + Y I GR+ +A+ L D
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMPVAP-----DAYTYTPIIRGLCDRGRVGEALSLLDD 201
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M C PSV T+ ++L + + +G+ + G + N+++ G+C G
Sbjct: 202 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 261
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A L+ +P+ +Y+T++ GLC E+ L M + + VTF++
Sbjct: 262 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 321
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ + G VE +++LE+M G GC N+ V+ + + R +A + + M
Sbjct: 322 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 381
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
SP +SY ++ GLC + ED +LK+MV++ P
Sbjct: 382 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 419
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 144/327 (44%), Gaps = 40/327 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT+++ + ++ F +++ ++ K C + YNVI GR+ A
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA-KGCT-PNIVTYNVIINGMCREGRVDDAR 266
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L + SY P ++ VL L +AK + +++ ++ + + ++L++
Sbjct: 267 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G +E A VL++ C N + +++ +C++G V++AF L M S G DT
Sbjct: 327 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 386
Query: 269 -----------------------------------VTFNILISGLRKQGKVEEGMKLLER 293
VTFN I L ++G +E+ L+E+
Sbjct: 387 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 446
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M GC N +Y ++ G + R A EL M C+ P+ ++Y L+ GLCN +
Sbjct: 447 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 503
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ +L +M+Q+ P + + +V
Sbjct: 504 LDAAAELLAEMLQKDCAPNVVTFNVLV 530
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A ++D + P+V + L+ LC +G +A +L E G D +N L++
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 277 --------------------------------GLRKQGKVEEGMKLLERMKGKGCYPNSA 304
GL +G+V E + LL+ M +GC P+
Sbjct: 153 GYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVV 212
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y +L + F +A E++ M + +P+ V+Y +I+G+C + V+D L ++
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 272
Query: 365 VQQGFVP 371
GF P
Sbjct: 273 SSYGFQP 279
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 158/329 (48%), Gaps = 19/329 (5%)
Query: 44 DHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQ 103
D + Y L K ++ K F+ L +K + + P ++YT++ +
Sbjct: 159 DSYTYHLVIKSLCQMNQIDKAFTML-----------DKAKVRGFKPEVSVYTILTRAFCK 207
Query: 104 AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKAIETLFDMPSYNCWPS 162
R +I + I D YN I I+G+ A+E L +M P
Sbjct: 208 TGRLKDALEIFRNIPS------PDAIAYNAI-IHGHCRKNDCDGALEFLKEMNERKVAPD 260
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
V T+N++++ L A + + GV D N ++ GLC+ G E A +L
Sbjct: 261 VFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLA 320
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
++NC P+ TY+TL+ GLC++ NV+ A L++ S G D VT++IL GL K+G
Sbjct: 321 VMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRG 380
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+++E +L++ M GKGC PN +Y ++ GL + +A EL+ ++ P V+Y
Sbjct: 381 RIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYT 440
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ GLC + ++ +++ M+++G P
Sbjct: 441 IIVDGLCKEGRLDKALKMVEGMLKRGCTP 469
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 139/280 (49%), Gaps = 2/280 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y II+ + D + ++ + K+ D F YN++ A + KA
Sbjct: 223 SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVA--PDVFTYNILIDGLCKASKTDKA 280
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L +M P TFN +++ L A + + A+ C N L+ G
Sbjct: 281 SEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISG 340
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ N++ A ++DEF P+V TYS L GLC++G ++EAF L++ M +G +
Sbjct: 341 LCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPN 400
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+N LI GL K K E+ +LLE + G P+ +Y ++ GL + R +A ++V
Sbjct: 401 LVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVE 460
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
M+ +PS ++Y L+ GLC V++ + K+MV +
Sbjct: 461 GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 500
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 156/319 (48%), Gaps = 19/319 (5%)
Query: 60 EVLKIFSNLRDP--ISVISVLNQYSKRKDYN---------------PNEALYTLIINKLA 102
+ L+IF N+ P I+ ++++ + ++ D + P+ Y ++I+ L
Sbjct: 213 DALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLC 272
Query: 103 QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPS 162
+A + D +++ + + D +N I AG+ +A L M NC PS
Sbjct: 273 KASKTDKASEMLHEMVDRGV--TPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPS 330
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
T+N +++ L + + + G D +IL GLC+ G ++ AF ++
Sbjct: 331 CCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVK 390
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
E + C PN+ TY+TL+ GLC+ E+A+ LLE + S G D VT+ I++ GL K+G
Sbjct: 391 EMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEG 450
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
++++ +K++E M +GC P+ +Y ++ GL R EA + M+ + + ++Y
Sbjct: 451 RLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYV 510
Query: 343 KLIHGLCNQKLVEDVDWVL 361
L++G C ++ V+
Sbjct: 511 SLVNGYCKSSRTKEAQKVV 529
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 15/292 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK---IYGNMA 141
K PN Y +I+ L +A + + ++++ + S GF +V+ I +
Sbjct: 395 KGCTPNLVTYNTLIDGLCKASKTEKAYELLESL-------VSSGFVPDVVTYTIIVDGLC 447
Query: 142 --GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
GR+ KA++ + M C PSV T+ ++ L E I+ DA
Sbjct: 448 KEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADAL 507
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
L+ G C++ + A V+D P + Y+ LM G C++G ++E + E M
Sbjct: 508 AYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDM 564
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G + T+NI++ GL K GKV+E LE M GC P+ SY ++ GL +
Sbjct: 565 ACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKP 624
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA++++ +MI + P V+Y L+ C ++ +D +LK M++ G P
Sbjct: 625 KEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDP 676
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 155/356 (43%), Gaps = 52/356 (14%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
S+++V+ + + R P+ Y +I+ L + + D +D++ S GF +
Sbjct: 317 SLLAVMAERNCR----PSCCTYNTLISGLCKQQNVDRAKDLVDEF-------VSSGFVPD 365
Query: 133 VIKIYGNMA------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
V+ Y +A GRI +A E + +M C P++ T+N +++ L A + +
Sbjct: 366 VV-TYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELL 424
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S G D I++ GLC+ G L+ A +++ K+ C P+V TY+ LM GLC
Sbjct: 425 ESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRT 484
Query: 247 GNVEEAFGLLERMESEGIDADTVT--------------------------------FNIL 274
G V+EA + + M S+ AD + +N L
Sbjct: 485 GRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNAL 544
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
+ G K+G+++E + E M +GC PN +Y V+ GL + EA + M
Sbjct: 545 MDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGC 604
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
P VSY +I GL ++ VL +M+Q G P + ++ F K+ R
Sbjct: 605 VPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMA--QFCKEER 658
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 129/299 (43%), Gaps = 16/299 (5%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-----FYNVIKIYGNMA 141
Y P+ Y L+I L Q + D ++ + KV GF Y ++
Sbjct: 156 YAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVR-------GFKPEVSVYTILTRAFCKT 208
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ A+E ++PS P +N +++ + V D
Sbjct: 209 GRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTY 264
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ GLC+ + A +L E + P+ T++++M GLC+ G E A LL M
Sbjct: 265 NILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE 324
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
T+N LISGL KQ V+ L++ G P+ +Y + GL + R E
Sbjct: 325 RNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDE 384
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ELV M + +P+ V+Y LI GLC E +L+ +V GFVP + + IV
Sbjct: 385 AFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIV 443
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 6/281 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD + Y ++N ++ R + ++ I+ + D YN + GR+
Sbjct: 500 KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTP---YID--VYNALMDGYCKEGRL 554
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ DM C P++KT+N+V++ L E S G D NI+
Sbjct: 555 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 614
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GL + + A VLD+ + P+ TY+TLM C++ ++A G+L+ M G+
Sbjct: 615 IDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 674
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS-ASYQEVLYGLLDKKRFPEAK 323
D D VT+N LISGL + ++ + +L+ M GC ++ +Y ++ L + +A
Sbjct: 675 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQAL 734
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
L+ M + + V+Y I LC + +++ +L +M
Sbjct: 735 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 775
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 137/319 (42%), Gaps = 42/319 (13%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++++ L + + D ++ + D YN+I A + +A
Sbjct: 571 PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGC--VPDVVSYNIIIDGLFKASKPKEAR 628
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L M P T+N ++ + + + GI + K GV+ D N L+ GL
Sbjct: 629 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 688
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNV-RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ L A+ ++ E + C + TY+T++ LC++G +++A L++ M G++A+
Sbjct: 689 SQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEAN 748
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL-----LDK------ 316
TVT+NI I L K+G+++E LL M + SY V+ GL LD+
Sbjct: 749 TVTYNIFIDRLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAR 805
Query: 317 -------------------------KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
KR EA L+G M+ SPS ++Y +I LC
Sbjct: 806 EMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKL 865
Query: 352 KLVEDVDWVLKKMVQQGFV 370
V+ + +M +G V
Sbjct: 866 DKVDKAWELFDEMAVRGIV 884
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 7/279 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ + + +RFD I++ + K D YN + + R+ A
Sbjct: 641 PDAVTYNTLMAQFCKEERFDDAVGILKNMI--KAGVDPDNVTYNTLISGLSQTNRLGDAY 698
Query: 149 ETLFDMPSYNCWPSV-KTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E + +M C S T+N +++ L + + GVE + NI +
Sbjct: 699 ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDR 758
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES-EGIDA 266
LC+ G L+ A +L E E +Y+T++ GLC+ ++ A L M + +G+
Sbjct: 759 LCKEGRLDEASSLLSEMDTLRDEV---SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCI 815
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ TFN+LI K +++E + LL M +GC P+ +Y V+ L + +A EL
Sbjct: 816 TSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELF 875
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
M + S VSY LI+GLC Q ++ VL++M
Sbjct: 876 DEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMA 914
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y +I+ L+Q R ++M + + C S YN I G + +A
Sbjct: 675 DPDNVTYNTLISGLSQTNRLGDAYELMHEM-LRNGCVVSACTTYNTIIDRLCKEGCLKQA 733
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLV-------SAKLYGEIQGI-----YTS------- 188
+ + M + + T+N+ ++ L ++ L E+ + YT+
Sbjct: 734 LLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCK 793
Query: 189 ------AAKLG---VEIDACCL-----NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
A+KL V + C+ N+L+ + L+ A +L ++ C P+V
Sbjct: 794 AEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVI 853
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TY+ ++ LC+ V++A+ L + M GI A +V++ +LI GL QG+ +E +++LE M
Sbjct: 854 TYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
Query: 295 KGKGCYPNSASYQEV 309
C + +++V
Sbjct: 914 ASSDCEIDDLKWEDV 928
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 161/351 (45%), Gaps = 13/351 (3%)
Query: 44 DHHAYKLNHKDWLSPTEVLKIFSNL---RDPISVISVLNQYSKRKDYNPNEALYTLIINK 100
++ Y N D + T +++ F L R ++ +L P+ Y ++I+
Sbjct: 126 ENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV----PDVITYNVMISG 181
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCW 160
+A + ++ R+ V D YN I +G++ +A+E L M +C+
Sbjct: 182 YCKAGEINNALSVLDRMSVS-----PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+ +++ G + G D N+L+ G+C+ G L+ A
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L++ P C+PNV T++ ++ +C G +A LL M +G VTFNILI+ L +
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G + + +LE+M GC PNS SY +L+G +K+ A E + RM+ P V+
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNR 390
Y ++ LC VED +L ++ +G P + + ++ G GK +
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 154/307 (50%), Gaps = 3/307 (0%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ VL++ +R Y P+ YT++I + ++ ++ ++ C D YNV
Sbjct: 223 AMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMR-DRGCT-PDVVTYNV 279
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ GR+ +AI+ L DMPS C P+V T N++L + S + + + + + G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
NIL+ LC G L A +L++ P+ C+PN +Y+ L+HG C++ ++ A
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
LERM S G D VT+N +++ L K GKVE+ +++L ++ KGC P +Y V+ GL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ +A +L+ M + + P ++Y L+ GL + V++ + + G P
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 374 GMWREIV 380
+ I+
Sbjct: 520 VTFNSIM 526
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 138/285 (48%), Gaps = 6/285 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +++N + + R D + + C+ + +N+I GR A
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG-CQ-PNVITHNIILRSMCSTGRWMDAE 329
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L DM PSV TFN+++N L L G I + G + ++ N LL G
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ ++ A L+ + C P++ TY+T++ LC+ G VE+A +L ++ S+G
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+N +I GL K GK + +KLL+ M+ K P++ +Y ++ GL + + EA +
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 329 MICERMS--PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
ERM P+ V++ ++ GLC + + L M+ +G P
Sbjct: 510 F--ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 137/289 (47%), Gaps = 12/289 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-----FYNVIKIYGNMAGR 143
PN + +I+ + R+ E ++ + GF +N++ + G
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADM-------LRKGFSPSVVTFNILINFLCRKGL 359
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +AI+ L MP + C P+ ++N +L+ K G D N
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L LC++G +E A +L++ + C P + TY+T++ GL + G +A LL+ M ++
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ DT+T++ L+ GL ++GKV+E +K + G PN+ ++ ++ GL ++ A
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+ + MI P+ SY LI GL + + ++ +L ++ +G + +
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 3/176 (1%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L+ + G LE F L+ P++ +TL+ G C G +A +LE +E G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+N++ISG K G++ + +L+RM P+ +Y +L L D + +A E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ RM+ P ++Y LI C V +L +M +G P + + +V
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 2/219 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ + K+ D + ++R+ V + C + D YN + G++ A+
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERM-VSRGC-YPDIVTYNTMLTALCKDGKVEDAV 434
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L + S C P + T+N V++ L A G+ + ++ D + L+ GL
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
G ++ A EF + PN T++++M GLC+ + A L M + G +
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ ILI GL +G +E ++LL + KG S++ Q
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQ 593
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 155/298 (52%), Gaps = 5/298 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ YT ++ L AKR++ +E++ + +EK C ++ F +++ + G + +
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEM-MEKNCMPNEVTFDMLVRFFCR-GGMVER 303
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
AI+ L M + C + N+V+N + + + G D +LK
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 363
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC E A +L E ++NC PN T++T + LC+KG +E+A L+E+M G +
Sbjct: 364 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ VT+N L++G QG+V+ ++L M C PN+ +Y +L GL + +R A EL+
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELL 480
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
M+ + +P+ V++ L+ C + L+++ ++++M++ G P + + ++ +T
Sbjct: 481 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 538
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 140/294 (47%), Gaps = 30/294 (10%)
Query: 89 PNEALYTLIINKLAQAKR----FDAIEDIMQR----------IKVEKLCRFSDGFFYNVI 134
P+ YT II L R ++D++ R + +E +C+ S GF
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK-STGF----- 196
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+A+E L +M + C P++ T+N+++N + + + + G
Sbjct: 197 ----------GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGF 246
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ D +LKGLC E + E ++NC PN T+ L+ C G VE A
Sbjct: 247 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQ 306
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+LE+M G A+T NI+I+ + KQG+V++ + L M GC P++ SY VL GL
Sbjct: 307 VLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLC 366
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+R+ +AKEL+ M+ + P+ V++ I LC + L+E ++++M + G
Sbjct: 367 RAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 6/306 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I VL Q S N L ++IN + + R D + + D Y +
Sbjct: 305 IQVLEQMSGHG-CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC--SPDTISYTTV 361
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
A R A E L +M NC P+ TFN + +L L + + ++ G
Sbjct: 362 LKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 421
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E++ N L+ G C G +++A + P C+PN TY+TL+ GLC ++ A
Sbjct: 422 EVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAE 478
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL M + + VTFN+L+S ++G ++E ++L+E+M GC PN +Y +L G+
Sbjct: 479 LLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 538
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
EA EL+ ++ +SP V+Y +I L + VE+ + + G P+
Sbjct: 539 KDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAV 598
Query: 375 MWREIV 380
++ +I+
Sbjct: 599 IYNKIL 604
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 119/231 (51%), Gaps = 15/231 (6%)
Query: 141 AGRISKAIE---TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
A R+ +A E T D+ +YN L+ YG++ A + V D
Sbjct: 97 AARVLRAAERSGTAVDVFAYN------------TLVAGYCRYGQLDAARRLIASMPVAPD 144
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A +++GLC+ G + A +LD+ + C+P+V TY+ L+ +C+ +A +L+
Sbjct: 145 AYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 204
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M ++G + VT+N++I+G+ ++G+V++ + L R+ G P++ SY VL GL K
Sbjct: 205 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
R+ + +EL M+ + P+ V++ L+ C +VE VL++M G
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 315
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ +A + G +D N L+ G C G L+AA ++ P P+ TY+ ++ GLC
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLC 156
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G V EA LL+ M G VT+ +L+ + K + M++L+ M+ KGC PN
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ G+ + R +A+E + R+ P VSY ++ GLC K EDV+ + +M
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276
Query: 365 VQQGFVP 371
+++ +P
Sbjct: 277 MEKNCMP 283
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 142/296 (47%), Gaps = 7/296 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK+ PNE + I L Q + +++++ E C + YN + + GR
Sbjct: 383 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS-EHGCEV-NIVTYNALVNGFCVQGR 440
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+E + MP C P+ T+ +L L +A+ + + + N+
Sbjct: 441 VDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C+ G ++ A ++++ + C PN+ TY+TL+ G+ + N EEA LL + S G
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 557
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D VT++ +I L ++ +VEE +K+ ++ G P + Y ++L L + A
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR--MGMWR 377
+ M+ P+ ++Y LI GL N+ +++ +L+++ +G + + + WR
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLLEEWR 673
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ +A+ L DM C PSV T+ ++L + + +G+ + G +
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 218
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+++ G+C G ++ A L+ +P+ +Y+T++ GLC E+ L M
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + VTF++L+ + G VE +++LE+M G GC N+ V+ + + R +
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A + + M SP +SY ++ GLC + ED +LK+MV++ P
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 144/327 (44%), Gaps = 40/327 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT+++ + ++ F +++ ++ K C + YNVI GR+ A
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA-KGCT-PNIVTYNVIINGMCREGRVDDAR 235
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L + SY P ++ VL L +AK + +++ ++ + + ++L++
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G +E A VL++ C N + +++ +C++G V++AF L M S G DT
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355
Query: 269 -----------------------------------VTFNILISGLRKQGKVEEGMKLLER 293
VTFN I L ++G +E+ L+E+
Sbjct: 356 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M GC N +Y ++ G + R A EL M C+ P+ ++Y L+ GLCN +
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 472
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ +L +M+Q+ P + + +V
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLV 499
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 32/202 (15%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ L +L A ++D + P+V + L+ LC +G +A +L E
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 262 EGIDADTVTFNILIS--------------------------------GLRKQGKVEEGMK 289
G D +N L++ GL +G+V E +
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALS 166
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
LL+ M +GC P+ +Y +L + F +A E++ M + +P+ V+Y +I+G+C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
+ V+D L ++ GF P
Sbjct: 227 REGRVDDAREFLNRLSSYGFQP 248
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 155/298 (52%), Gaps = 5/298 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ YT ++ L AKR++ +E++ + +EK C ++ F +++ + G + +
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEM-MEKNCMPNEVTFDMLVRFFCR-GGMVER 303
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
AI+ L M + C + N+V+N + + + G D +LK
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 363
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC E A +L E ++NC PN T++T + LC+KG +E+A L+E+M G +
Sbjct: 364 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ VT+N L++G QG+V+ ++L M C PN+ +Y +L GL + +R A EL+
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELL 480
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
M+ + +P+ V++ L+ C + L+++ ++++M++ G P + + ++ +T
Sbjct: 481 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 538
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 140/294 (47%), Gaps = 30/294 (10%)
Query: 89 PNEALYTLIINKLAQAKR----FDAIEDIMQR----------IKVEKLCRFSDGFFYNVI 134
P+ YT II L R ++D++ R + +E +C+ S GF
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK-STGF----- 196
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+A+E L +M + C P++ T+N+++N + + + + G
Sbjct: 197 ----------GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGF 246
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ D +LKGLC E + E ++NC PN T+ L+ C G VE A
Sbjct: 247 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQ 306
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+LE+M G A+T NI+I+ + KQG+V++ + L M GC P++ SY VL GL
Sbjct: 307 VLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLC 366
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+R+ +AKEL+ M+ + P+ V++ I LC + L+E ++++M + G
Sbjct: 367 RAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 141/306 (46%), Gaps = 6/306 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I VL Q S N L ++IN + + R D + + D Y +
Sbjct: 305 IQVLEQMSGHG-CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC--SPDTISYTTV 361
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
A R A E L +M NC P+ TFN + +L L + + ++ G
Sbjct: 362 LKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 421
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E++ N L+ G C G +++A + P C+PN TY+TL+ GLC ++ A
Sbjct: 422 EVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAE 478
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL M + + VTFN+L+S ++G ++E ++L+E+M GC PN +Y +L G+
Sbjct: 479 LLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 538
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ EA EL+ ++ +SP V+Y +I L + VE+ + + G P+
Sbjct: 539 NDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAV 598
Query: 375 MWREIV 380
++ +I+
Sbjct: 599 IYNKIL 604
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 119/231 (51%), Gaps = 15/231 (6%)
Query: 141 AGRISKAIE---TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
A R+ +A E T D+ +YN L+ YG++ A + V D
Sbjct: 97 AARVLRAAERSGTAVDVFAYN------------TLVAGYCRYGQLDAARRLIASMPVAPD 144
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A +++GLC+ G + A +LD+ + C+P+V TY+ L+ +C+ +A +L+
Sbjct: 145 AYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 204
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M ++G + VT+N++I+G+ ++G+V++ + L R+ G P++ SY VL GL K
Sbjct: 205 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
R+ + +EL M+ + P+ V++ L+ C +VE VL++M G
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 315
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ +A + G +D N L+ G C G L+AA ++ P P+ TY+ ++ GLC
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLC 156
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G V EA LL+ M G VT+ +L+ + K + M++L+ M+ KGC PN
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ G+ + R +A+E + R+ P VSY ++ GLC K EDV+ + +M
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276
Query: 365 VQQGFVP 371
+++ +P
Sbjct: 277 MEKNCMP 283
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 141/296 (47%), Gaps = 7/296 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK+ PNE + I L Q + +++++ E C + YN + + GR
Sbjct: 383 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS-EHGCEV-NIVTYNALVNGFCVQGR 440
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+E + MP C P+ T+ +L L +A+ + + + N+
Sbjct: 441 VDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C+ G ++ A ++++ + C PN+ TY+TL+ G+ N EEA LL + S G
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNG 557
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D VT++ +I L ++ +VEE +K+ ++ G P + Y ++L L + A
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR--MGMWR 377
+ M+ P+ ++Y LI GL N+ +++ +L+++ +G + + + WR
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLLEEWR 673
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ +A+ L DM C PSV T+ ++L + + +G+ + G +
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 218
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+++ G+C G ++ A L+ +P+ +Y+T++ GLC E+ L M
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + VTF++L+ + G VE +++LE+M G GC N+ V+ + + R +
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A + + M SP +SY ++ GLC + ED +LK+MV++ P
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 144/327 (44%), Gaps = 40/327 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT+++ + ++ F +++ ++ K C + YNVI GR+ A
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA-KGCT-PNIVTYNVIINGMCREGRVDDAR 235
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L + SY P ++ VL L +AK + +++ ++ + + ++L++
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G +E A VL++ C N + +++ +C++G V++AF L M S G DT
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355
Query: 269 -----------------------------------VTFNILISGLRKQGKVEEGMKLLER 293
VTFN I L ++G +E+ L+E+
Sbjct: 356 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M GC N +Y ++ G + R A EL M C+ P+ ++Y L+ GLCN +
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 472
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ +L +M+Q+ P + + +V
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLV 499
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 32/202 (15%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ L +L A ++D + P+V + L+ LC +G +A +L E
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 262 EGIDADTVTFNILIS--------------------------------GLRKQGKVEEGMK 289
G D +N L++ GL +G+V E +
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALS 166
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
LL+ M +GC P+ +Y +L + F +A E++ M + +P+ V+Y +I+G+C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
+ V+D L ++ GF P
Sbjct: 227 REGRVDDAREFLNRLSSYGFQP 248
>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 610
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 155/320 (48%), Gaps = 38/320 (11%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y L+I KL +AK F +E I+ + K + + F N+I YG AG A++ +
Sbjct: 50 YDLMITKLGRAKMFHEMEQILLQFKTQTRLVAKEPLFCNIITFYGR-AGLPQNALKMFDE 108
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
MP Y C ++K++N +LN+L+ K + ++ + + K V+ D C NI+++GLC +G
Sbjct: 109 MPLYRCQRTIKSYNTLLNVLMICKEFDVMREHFVN-IKRHVKPDGCTFNIMIRGLCSDGR 167
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG------------------- 254
++ A VLDE ++ PN T+ TL++GLC ++EAF
Sbjct: 168 VDDALKVLDEMKNRDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYVYA 227
Query: 255 -----------------LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
L E ME +G+ D+ ++ LISGL K G+ +E +L M+ K
Sbjct: 228 TLIKGLCAVGELSFALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELK 287
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
GC ++ +Y ++ G K F A +++ M+ R P +SY ++ LC +
Sbjct: 288 GCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEA 347
Query: 358 DWVLKKMVQQGFVPRMGMWR 377
+ + M ++G P + +R
Sbjct: 348 SDLFEDMPRRGCAPDVVSYR 367
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 40/302 (13%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++N L K FD + + IK DG +N++ GR+ A++ L +
Sbjct: 121 YNTLLNVLMICKEFDVMREHFVNIKRHVK---PDGCTFNIMIRGLCSDGRVDDALKVLDE 177
Query: 154 MPSYNCWPSVKTF-NLVLNLLVSAKL-------------YGEIQGIYTSAAKL------- 192
M + + P+ TF L+ L ++ KL +G Y A +
Sbjct: 178 MKNRDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYVYATLIKGLCAVG 237
Query: 193 ---------------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
GV++D+ + L+ GL + G + F VL E + C+ + TY+
Sbjct: 238 ELSFALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELKGCKADTVTYN 297
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
+++G C+ + E A+ +L+ M D +++N+++ L K GK E L E M +
Sbjct: 298 VMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRR 357
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
GC P+ SY+ V GL D F +A ++ M+ + +P S K I+ LC Q ED+
Sbjct: 358 GCAPDVVSYRIVFDGLSDAMEFKDAAFILDEMVFKGFAPRSSSICKFINRLC-QNGDEDL 416
Query: 358 DW 359
W
Sbjct: 417 VW 418
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 9/227 (3%)
Query: 83 KRKDYNPNEALYTLIINKLA---QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
K +D PN+ + +I L + K ++D M + V LC + + Y + I G
Sbjct: 179 KNRDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYM--VNVHGLC--PNEYVYATL-IKGL 233
Query: 140 MA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
A G +S A+ +M ++ +++ L E+ G+ G + D
Sbjct: 234 CAVGELSFALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELKGCKADT 293
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N+++ G C++ + E A+ +LDE + C+P+V +Y+ ++ LC+ G EA L E
Sbjct: 294 VTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEASDLFED 353
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
M G D V++ I+ GL + ++ +L+ M KG P S+S
Sbjct: 354 MPRRGCAPDVVSYRIVFDGLSDAMEFKDAAFILDEMVFKGFAPRSSS 400
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 115/284 (40%), Gaps = 23/284 (8%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L + +R + A+Y+ +I+ L + R D + ++ +++ K C+ +D YNV+ I
Sbjct: 245 LKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMEL-KGCK-ADTVTYNVM-IN 301
Query: 138 GNMAGR-ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G + A + L +M C P V ++N++L L + E ++ + G
Sbjct: 302 GFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRRGCAP 361
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D I+ GL + + A ++LDE + P + ++ LC+ G+ + + +L
Sbjct: 362 DVVSYRIVFDGLSDAMEFKDAAFILDEMVFKGFAPRSSSICKFINRLCQNGDEDLVWSVL 421
Query: 257 ERM-ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+ + ID + I ++ L M Y + E L
Sbjct: 422 NCLGKINAIDTELWKMAIAVA-------------LKNSMLSSPKYQEQQKFFENCLATLQ 468
Query: 316 KKRFPEAKELVGR--MICERMSPSFVSYKK---LIHGLCNQKLV 354
+K P + + + + C S +F YK L+H C LV
Sbjct: 469 RKIAPFLRSHITQSDLFCPGASNTFPEYKAQTLLLHEFCELNLV 512
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 150/283 (53%), Gaps = 8/283 (2%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
+ Y+LI N + + F ++E ++ ++K E F + F + K YG A KA++
Sbjct: 67 SFYSLIEN-FSNSLDFTSLEQLLHQMKCENRV-FIEKSFIIMFKAYGK-AHLPQKALDLF 123
Query: 152 FDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT----SAAKLGVEIDACCLNILLK 206
M + ++C +VK+FN VLN+++ + Y S + ++ + N+++K
Sbjct: 124 HRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIK 183
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC GN++ A V +NC + TYSTLMHGLC +G ++EA LL+ M+ EG
Sbjct: 184 ALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFP 243
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ V FN+LIS L K+G + KL++ M KGC PN +Y +++GL K + +A L+
Sbjct: 244 NPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLL 303
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
RM+ + P+ +++ L+ G D VL + ++G+
Sbjct: 304 NRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGY 346
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 130/280 (46%), Gaps = 2/280 (0%)
Query: 94 YTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGRISKAIETL 151
+ ++N + Q FD A+E I +G +N++ G + +A+E
Sbjct: 139 FNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVF 198
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
M NC T++ +++ L + E + G + N+L+ LC+
Sbjct: 199 RGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKK 258
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G+L A ++D + C PN TY++L+HGLC KG +++A LL RM + + +TF
Sbjct: 259 GDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITF 318
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
L+ G K G+ +G+++L ++ KG N SY ++ GL + + +L M+
Sbjct: 319 GTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVE 378
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P+ + Y LI GLC + ++ L +M +G P
Sbjct: 379 KGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTP 418
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 16/266 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + L+I L + D ++ + + ++ C +DG+ Y+ + GRI +A+
Sbjct: 173 PNGLSFNLVIKALCRVGNVDQAVEVFRGMS-DRNC-VADGYTYSTLMHGLCNEGRIDEAV 230
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-------GVEIDACCL 201
L +M +P+ FN++++ L +G + A+KL G +
Sbjct: 231 SLLDEMQVEGTFPNPVAFNVLISALCK-------KGDLSRASKLVDNMFLKGCVPNEVTY 283
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC G L+ A +L+ C PN T+ TL+ G + G + +L +E
Sbjct: 284 NSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEE 343
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G + +++ LISGL K+GK E GM+L + M KGC PN+ Y ++ GL + + E
Sbjct: 344 KGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDE 403
Query: 322 AKELVGRMICERMSPSFVSYKKLIHG 347
AKE + M + +P+ +Y L+ G
Sbjct: 404 AKEYLIEMKNKGHTPNSFTYSSLMWG 429
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 139/308 (45%), Gaps = 12/308 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PNE Y +++ L + D ++ R+ K C +D F ++ + GR +
Sbjct: 278 PNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANK-CVPNDITFGTLVDGFVK-HGRALDGV 335
Query: 149 ETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L + + +++ L+ L K +Q ++ + G + + + L+ G
Sbjct: 336 RVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQ-LWKEMVEKGCKPNTIVYSALIDG 394
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC G + A L E + PN TYS+LM G E G++ +A + + M +
Sbjct: 395 LCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHH 454
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V ++ILI+GL K GK++E + + ++M +G + +Y +++G + + + +L
Sbjct: 455 EVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFN 514
Query: 328 RMICE--RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
+M+C ++ P V+Y L++ C + V +L M+ QG P + + C F
Sbjct: 515 QMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDP------DFITCDIF 568
Query: 386 GKDNRNRV 393
K R+ +
Sbjct: 569 LKTLRDNM 576
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 131/297 (44%), Gaps = 20/297 (6%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ K Y NE Y+ +I+ L + + + + + + VEK C+ + Y+ + G
Sbjct: 342 EEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEM-VEKGCK-PNTIVYSALIDGLCREG 399
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ +A E L +M + P+ T++ L+ + ++ I ++ C
Sbjct: 400 KPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAIL-VWKEMTDNDCNHHEVCY 458
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-- 259
+IL+ GLC+NG L+ A V + + + +V YS+++HG C VE+ L +M
Sbjct: 459 SILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLC 518
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ + D VT+NIL++ + V + +L M +GC P+ + L L D
Sbjct: 519 HNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDP 578
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
P+ GR + + + ++ + G N +++ M+Q+ +P+ W
Sbjct: 579 PQD----GREFLDELVVRLIKRQRTV-GASN---------IIEVMLQKFLLPKPSTW 621
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAF----GLLERMESEGIDADTVTFNILISGLRKQGK 283
+C+ V++++T+++ + ++G + A +++ I + ++FN++I L + G
Sbjct: 131 HCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGN 190
Query: 284 VEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKK 343
V++ +++ M + C + +Y +++GL ++ R EA L+ M E P+ V++
Sbjct: 191 VDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNV 250
Query: 344 LIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LI LC + + ++ M +G VP + +V
Sbjct: 251 LISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLV 287
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 178/396 (44%), Gaps = 76/396 (19%)
Query: 50 LNHKDWLSPTEVLKIFSNLRDPISVISVL---NQYSKRKDYNPNEALYTLIINKLAQAKR 106
+N ++P + + +DP + + N + K + + Y LII KL +AK
Sbjct: 1 MNPSRPITPFRLASLLRLQKDPKLALQLFKNPNPKTPSKPFRYSLLSYDLIITKLGRAKM 60
Query: 107 FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF 166
F+ +++I+ ++K E L + F ++I YG A A++ L ++PS+ +VK++
Sbjct: 61 FNEMQEILAQLKEETLFTPKEALFCDIINFYGR-ARLPENALKLLVELPSFRVQRTVKSY 119
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
N +L++ + K + +++ ++ KLG + DAC N+L++G C +G L+ A V DE
Sbjct: 120 NSLLSVFLMCKDFDKMRELFVGIEKLG-KADACTYNLLIRGFCASGRLDDASKVFDEMTN 178
Query: 227 QNCEPNVRT------------------------------------YSTLMHGLCEKGNVE 250
+ PNV T Y++L+ G+C+ G +
Sbjct: 179 RGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYASLIKGVCKNGELS 238
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM---------------------- 288
AF L + M I+ D ++ LISGL K G+ EE +
Sbjct: 239 LAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVII 298
Query: 289 -------------KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+LL+ M KGC P+ SY +L L ++ + EA +L M +
Sbjct: 299 NLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDLFEDMPRRGCA 358
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P VSY+ L G CN ++ ++L +M+ +GFVP
Sbjct: 359 PDVVSYRILFDGFCNGMQFKEAAFILDEMIFKGFVP 394
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%)
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E G++ + G + D N+++ C++ + EAA+ +LDE ++ C+P+V +Y+ ++
Sbjct: 274 EALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVIL 333
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
L E+G EA L E M G D V++ IL G + +E +L+ M KG
Sbjct: 334 RELFEEGKRGEANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMIFKGFV 393
Query: 301 PNSAS 305
P SAS
Sbjct: 394 PCSAS 398
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 5/179 (2%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
+ A+Y+ +I+ L +A R + + + +K E+ + D YNVI A
Sbjct: 255 DPAIYSTLISGLFKAGRKEEALGVWEDMK-ERGYK-PDTVTYNVIINLFCKDKDFEAAYR 312
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
L +M C P V ++N++L L GE ++ + G D IL G C
Sbjct: 313 LLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDLFEDMPRRGCAPDVVSYRILFDGFC 372
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN---VEEAFGLLERMESEGID 265
+ A ++LDE + P + ++ LCE N + AF LE+ + +D
Sbjct: 373 NGMQFKEAAFILDEMIFKGFVPCSASICKFVNRLCEGKNEDLLRSAFNTLEKGKLVNVD 431
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 143/300 (47%), Gaps = 5/300 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ Y P Y ++I+ L + R + ++ + L D Y V AGR
Sbjct: 286 RQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGL--EPDAITYTVFIDGLCKAGR 343
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ L DM C P V + N V+N L K E + + + G +A N
Sbjct: 344 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 403
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC---EKGNVEEAFGLLERME 260
L+ G C G + A E K+ +P V TY+ L+ GLC ++G ++EA L + M
Sbjct: 404 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 463
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G D VT++ LI GL K GK+++ +LL M+ KGC PN +Y ++ GL +
Sbjct: 464 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVD 523
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA EL M+ + P ++Y +I LC Q++V+ + ++ G VP GM+ ++
Sbjct: 524 EALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLI 583
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 155/296 (52%), Gaps = 9/296 (3%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y+P+ +++ L ++ + + ++++ V+ LC S +N+ A RI
Sbjct: 12 YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDIST---FNIYISGLCRASRIGD 68
Query: 147 AIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A +T+FD M + WP+ T+N +L+ L + + Q +Y K G D N LL
Sbjct: 69 A-QTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLL 127
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C+ G L+ A + D K+ P+V TY+ L++G C+ ++EA +L+RM SE +
Sbjct: 128 HGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLV 187
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL-DKKRFPEAKE 324
D VT+N L++GL K G+V+E L+ KG PN +Y ++ GL + +R A++
Sbjct: 188 PDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQ 244
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ +M+ P VSY LIHGL ++ V + + +++QG+ P + + ++
Sbjct: 245 LLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILI 300
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 175/397 (44%), Gaps = 54/397 (13%)
Query: 19 LSSASTITRKRTFALASPSASHQDSDHHAY-KLNHKDWLSPTEVLKIFSNLRDPISVISV 77
+S A + + A SP ++ H + K+ D E LKIF
Sbjct: 101 MSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLD-----EALKIFDG---------- 145
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL--------------C 123
+ ++ + P+ Y +IN +A + D + I+QR+ E L C
Sbjct: 146 ----AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLC 201
Query: 124 R-----------FSDGFFYNVIKIYGNMAG------RISKAIETLFDMPSYNCWPSVKTF 166
+ GF NVI ++G R+ A + L M C P + ++
Sbjct: 202 KNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSY 261
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
N +++ L + E ++ S + G E + NIL+ GL + + AF + K
Sbjct: 262 NALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVK 321
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
EP+ TY+ + GLC+ G VE+A +L+ M+ +G D V+ N +I+GL K+ +V+E
Sbjct: 322 HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDE 381
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
LL M+ KGC PN+ S+ ++ G ++ +A M+ + P+ V+Y L+
Sbjct: 382 AEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVD 441
Query: 347 GLCNQKL---VEDVDWVLKKMVQQGFVPRMGMWREIV 380
GLC + +++ + M+++G VP + + ++
Sbjct: 442 GLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 478
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 12/279 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKV--EKLCRFSDGFFYNVIKIYGNMAGRISK 146
P+ YT+ I+ L +A R +ED + +K EK C D +N + R+ +
Sbjct: 326 PDAITYTVFIDGLCKAGR---VEDALLMLKDMDEKGC-VPDVVSHNAVINGLCKEKRVDE 381
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M + C P+ +FN ++ A + + + K GV+ NIL+
Sbjct: 382 AEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVD 441
Query: 207 GLC---ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
GLC + G ++ A + D ++ P+V TYS L+ GL + G +++A LL ME++G
Sbjct: 442 GLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG 501
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ T+N LISGL KV+E ++L M KGC P++ +Y ++ L ++ +A
Sbjct: 502 CIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKAL 561
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
L + + P+ Y LI GLC V VD LK
Sbjct: 562 ALFDGSLEAGVVPTSGMYFSLIDGLCA---VARVDEALK 597
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 118/241 (48%), Gaps = 5/241 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +IN L + KR D E ++ ++ K C + +N + AG+ KA+
Sbjct: 361 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEA-KGCS-PNAISFNTLICGQCRAGKWKKAM 418
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ---GIYTSAAKLGVEIDACCLNILL 205
T +M P+V T+N++++ L A+ G I+ ++ + + G D + L+
Sbjct: 419 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 478
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GL + G L+ A +L + C PNV TY++L+ GLC V+EA L M +G
Sbjct: 479 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCV 538
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
DT+T+ +IS L KQ V++ + L + G P S Y ++ GL R EA +L
Sbjct: 539 PDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598
Query: 326 V 326
+
Sbjct: 599 L 599
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 3/176 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--VEKLCRFSDGFFYNVIKIYGNMA 141
++ P Y ++++ L +A++ I++ + +EK R D Y+ + A
Sbjct: 426 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK-GRVPDVVTYSALIDGLGKA 484
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ A L M + C P+V T+N +++ L E ++ + + G D
Sbjct: 485 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITY 544
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
++ LC+ ++ A + D + P Y +L+ GLC V+EA LL+
Sbjct: 545 GTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 152/325 (46%), Gaps = 10/325 (3%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L P V + DP+ + + N + + Y I+ KL F+ +E ++
Sbjct: 5 LLPKHVAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLS 64
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
++ +G + +K YG G++ +A++T M YNC PSV + N ++N+LV
Sbjct: 65 EMRENVNNALLEGAYIEAMKNYGR-KGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVE 123
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ + +Y GV+ D I +K C+ AA +L P+ C+ N
Sbjct: 124 FGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVA 183
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y T++ GL + G + A L + M + + D V FN L+ L K+G V E +LL ++
Sbjct: 184 YCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVL 243
Query: 296 GKGCYPNSASYQEVLYGL-----LDK----KRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+G PN ++ + GL LD+ R EA+E + +M+ P ++Y +I
Sbjct: 244 KRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIID 303
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
G C + +V+D + VLK V +GF P
Sbjct: 304 GYCKKGMVQDANRVLKDAVFKGFKP 328
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 55/292 (18%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF---------FYNVIK 135
K + P+E Y +IN + D + F DG YN +
Sbjct: 324 KGFKPDEFTYCSLINGFCKDGDPD-----------RAMAVFKDGLGKGLRPSIVLYNTLI 372
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
+ G I A++ + +M C P++ T+NLV+N
Sbjct: 373 KGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVIN------------------------ 408
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
GLC+ G + A +++D+ + C P++ TY+TL+ G C++ ++ A +
Sbjct: 409 -----------GLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEM 457
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+ RM S+G+ D +T+N L++GL K GK EE M++ + M+ KGC PN +Y ++ L
Sbjct: 458 VNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCK 517
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
K+ EA +L+G M + + P VS+ L G C ++ + ++M +Q
Sbjct: 518 AKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQ 569
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 7/286 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK--VEKLCRFSDGFFYNVIKIYGNMAGRISK 146
PN Y L+IN L + + D + + K C D F YN + ++
Sbjct: 398 PNIWTYNLVINGLC---KMGCVSDASHLVDDAIAKGCP-PDIFTYNTLIDGYCKQLKLDS 453
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A E + M S P V T+N +LN L A E+ I+ + + G + NI++
Sbjct: 454 ATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVD 513
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE-GID 265
LC+ + A +L E + +P+V ++ TL G C+ G+++ A+ L RME + +
Sbjct: 514 SLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVC 573
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
T T+NI++S +Q + MKL MK GC P++ +Y+ V+ G + +
Sbjct: 574 HTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKF 633
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + +R PS ++ ++++ LC + V + ++ M+Q+G VP
Sbjct: 634 LLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVP 679
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 6/261 (2%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ +A E L M + P T+N +++ + + + A G + D
Sbjct: 275 RVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYC 334
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C++G+ + A V + + P++ Y+TL+ GL ++G + A L+ M
Sbjct: 335 SLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAEN 394
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + T+N++I+GL K G V + L++ KGC P+ +Y ++ G + + A
Sbjct: 395 GCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSA 454
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
E+V RM + M+P ++Y L++GLC E+V + K M ++G P + + IV
Sbjct: 455 TEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDS 514
Query: 383 VTFGKDNRNRVYVTETVDSLA 403
+ K V E VD L
Sbjct: 515 LCKAKK------VNEAVDLLG 529
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 6/197 (3%)
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
KL E++ +A G I+A +K G ++ A + NC+P+V ++
Sbjct: 61 KLLSEMRENVNNALLEGAYIEA------MKNYGRKGKVQEAVDTFERMDFYNCDPSVHSH 114
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+ +M+ L E G +A + RM G+ +D T+ I I K + ++LL M
Sbjct: 115 NAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPE 174
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
GC N+ +Y V+ GL D A+EL M+ + P V++ KL+H LC + LV +
Sbjct: 175 LGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFE 234
Query: 357 VDWVLKKMVQQGFVPRM 373
+ +L K++++G P +
Sbjct: 235 SERLLGKVLKRGVCPNL 251
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 107/266 (40%), Gaps = 45/266 (16%)
Query: 151 LFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
LFD C P V FN ++++L L E + + K GV + NI ++GLC
Sbjct: 203 LFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLC 262
Query: 210 ENGNLEAAFY---------VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
G L+ A L + EP+ TY++++ G C+KG V++A +L+
Sbjct: 263 REGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAV 322
Query: 261 SEGIDADTVT-----------------------------------FNILISGLRKQGKVE 285
+G D T +N LI GL +QG +
Sbjct: 323 FKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLIL 382
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
++L+ M GC PN +Y V+ GL +A LV I + P +Y LI
Sbjct: 383 PALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLI 442
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVP 371
G C Q ++ ++ +M QG P
Sbjct: 443 DGYCKQLKLDSATEMVNRMWSQGMTP 468
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 117/254 (46%), Gaps = 5/254 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +I+ + + D+ +++ R+ + + D YN + AG+ + +
Sbjct: 433 PDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMT--PDVITYNTLLNGLCKAGKSEEVM 490
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M C P++ T+N++++ L AK E + G++ D L G
Sbjct: 491 EIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGF 550
Query: 209 CENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+++ A+ + KQ + TY+ ++ E+ N+ A L M++ G D D
Sbjct: 551 CKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPD 610
Query: 268 TVTFNILISGLRKQGKVEEGMK-LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
T+ ++I G K G + +G K LLE M+ K P+ ++ VL L K + EA ++
Sbjct: 611 NYTYRVVIDGFCKMGNITQGYKFLLENME-KRFIPSLTTFGRVLNCLCVKDKVHEAVGII 669
Query: 327 GRMICERMSPSFVS 340
M+ + + P V+
Sbjct: 670 HLMLQKGIVPETVN 683
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 117/278 (42%), Gaps = 51/278 (18%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ K PN Y +I++ L +AK
Sbjct: 497 EEKGCTPNIITYNIIVDSLCKAK------------------------------------- 519
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC--- 199
++++A++ L +M S P V +F L G+I G Y ++ + D C
Sbjct: 520 KVNEAVDLLGEMKSKGLKPDVVSFG---TLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTT 576
Query: 200 -CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG-LLE 257
NI++ E N+ A + C+P+ TY ++ G C+ GN+ + + LLE
Sbjct: 577 ATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLE 636
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
ME I + T TF +++ L + KV E + ++ M KG P + + ++ DKK
Sbjct: 637 NMEKRFIPSLT-TFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVN---TIFE-ADKK 691
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
K LV ++ ++ ++ +Y+ L G+ ++K+++
Sbjct: 692 VVAAPKILVEDLL-KKGHIAYYTYELLYDGIRDKKILK 728
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 151/310 (48%), Gaps = 6/310 (1%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
V+ F N D + + +L + K + P+ +T II +A A D D ++ + +
Sbjct: 118 VISGFCNAGDLHAALELLEEM-KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCD 176
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+ Y + A ++ +A++ L +M C P++ T+N++++ L + G
Sbjct: 177 -----PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVG 231
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
Q + + G + N L+ G C+ GN++ A +L + PNV TYS L+
Sbjct: 232 AAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALI 291
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
GLC+ EA +LE M++ G+ D T++ LI GL K K+EE ++L RM G GC
Sbjct: 292 DGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCT 351
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P+ Y +++ + EA++ + M +R SP V+Y +I GLC + + +
Sbjct: 352 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVI 411
Query: 361 LKKMVQQGFV 370
L++M + G V
Sbjct: 412 LEQMQESGDV 421
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 152/285 (53%), Gaps = 5/285 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + P+ Y+ +I+ L +A + + E +++R+ C + ++I + +G
Sbjct: 311 KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG-CTPDVVVYSSIIHAFCK-SG 368
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-VEIDACCL 201
++ +A +TL +M P V T+N V++ L E Q I + G V D
Sbjct: 369 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTY 428
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ GLC++ L A +LD K C P+V TY+T++ GLC+ G +EEA LL+ M+
Sbjct: 429 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 488
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + VT+ LISGL K KV+E +++E M+ GC PN +Y ++ GL R E
Sbjct: 489 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKE 548
Query: 322 AKELVGRMICERM--SPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A++LV RM R SP +Y+ +++ L + LV++ + +L++M
Sbjct: 549 AQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 3/250 (1%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN++ AG + A+E L +M S P T ++ + +A G++ G
Sbjct: 115 YNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANA---GDLDGAMDHLR 171
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+G + + L+ LE A +L+E ++ C PN+ TY+ L+ LC+ V
Sbjct: 172 SMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVG 231
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A ++++M G + +TFN L+ G K+G V++ KLL M KG PN +Y ++
Sbjct: 232 AAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALI 291
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
GL ++F EAKE++ M ++P +Y LIHGLC +E+ + +L++M G
Sbjct: 292 DGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCT 351
Query: 371 PRMGMWREIV 380
P + ++ I+
Sbjct: 352 PDVVVYSSII 361
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 148/304 (48%), Gaps = 42/304 (13%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K PN Y+ +I+ L ++++F +++++ +K + D F Y+ + I+G A +
Sbjct: 278 KGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV--TPDAFTYSAL-IHGLCKADK 334
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I +A + L M C P V +Y+S
Sbjct: 335 IEEAEQMLRRMAGSGCTPDVV--------------------VYSS--------------- 359
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C++G L A L E KQ P+V TY+T++ GLC+ G + EA +LE+M+ G
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419
Query: 264 -IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ D VT++ +I+GL K + E KLL+RM GC P+ +Y ++ GL R EA
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG- 381
+ L+ M +P+ V+Y LI GLC + V++ + V+++M G P + + +V
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539
Query: 382 -CVT 384
CV+
Sbjct: 540 LCVS 543
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 151/314 (48%), Gaps = 6/314 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++I+ A A ++++ +K D F + I AG + A+
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFA--PDAFTHTPIITAMANAGDLDGAM 167
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L M C P+V T+ ++ AK E + + G + N+L+ L
Sbjct: 168 DHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDAL 224
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ + AA V+ + + PNV T+++L+ G C++GNV++A LL M ++G+ +
Sbjct: 225 CKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNV 284
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ LI GL K K E ++LE MK +G P++ +Y +++GL + EA++++ R
Sbjct: 285 VTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRR 344
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
M +P V Y +IH C + + L++M +Q P + + ++ G GK
Sbjct: 345 MAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 404
Query: 388 DNRNRVYVTETVDS 401
+V + + +S
Sbjct: 405 IAEAQVILEQMQES 418
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 3/216 (1%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
++N +L +LV K + E ++ S E D C NI++ G C G+L AA +L+E
Sbjct: 79 SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
P+ T++ ++ + G+++ G ++ + S G D + VT+ LI+ + K+
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPNVVTYTALIAAFARAKKL 195
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
EE MKLLE M+ +GC PN +Y ++ L A+++V +MI +P+ +++ L
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ G C + V+D +L MV +G P + + ++
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALI 291
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 40/246 (16%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ +Y+ II+ ++ + + +Q ++ ++ + D YN + G+I++A
Sbjct: 351 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQR--KSPDVVTYNTVIDGLCKLGKIAEA 408
Query: 148 IETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
L M S + P V T++ V+N L + + E Q + K G D ++
Sbjct: 409 QVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIID 468
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ G LE A Y+L + C PNV TY+TL+ GLC+ V+EA ++E M + G
Sbjct: 469 GLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 528
Query: 267 DTVTFNILISGLRKQGK-------------------------------------VEEGMK 289
+ VT+N +++GL G+ V+E +
Sbjct: 529 NLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQ 588
Query: 290 LLERMK 295
LLE+MK
Sbjct: 589 LLEQMK 594
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 10/190 (5%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS---DGFFYNV 133
+L Q + D P+ Y+ +IN L ++ + ++ R +C+ D Y
Sbjct: 411 ILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDR-----MCKAGCNPDVVTYTT 465
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
I GR+ +A L M C P+V T+ +++ L A+ E + + G
Sbjct: 466 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAG 525
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFP--KQNCEPNVRTYSTLMHGLCEKGNVEE 251
+ N ++ GLC +G ++ A ++ + C P+ TY T+++ L V+E
Sbjct: 526 CPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQE 585
Query: 252 AFGLLERMES 261
A LLE+M+S
Sbjct: 586 AEQLLEQMKS 595
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 182/375 (48%), Gaps = 26/375 (6%)
Query: 16 IQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKD--------------W---LSP 58
I ++ SAST A P H S HH ++ K W LSP
Sbjct: 47 ISAVRSASTAVG----AAVDPFTDHP-SHHHLAAVDSKSTLLKSYTVTPPIKPWPQRLSP 101
Query: 59 TEVLKIFSNLRDPISVISVLNQYSK-RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI 117
V+ + S ++ + + + K +++ N Y +I KL++A+ F+ +E ++ ++
Sbjct: 102 KRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQL 161
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
++ + + F VI+ YG AGR AI T +PS+ PSV++FN +LN LV K
Sbjct: 162 HKSQI-KCGENLFITVIRNYG-FAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNK 219
Query: 178 LYGEIQGIYTSA-AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ + ++ + K G+ + NIL+K LC+ +++AA VL+E P PNV TY
Sbjct: 220 RFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTY 279
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+T++ G KG++ A + + G D T+ IL+ G K+G+ + +K+++ M+
Sbjct: 280 TTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEE 339
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
PN +Y ++ +K+ E L+ M+ ++ PS ++I LC + VE
Sbjct: 340 NRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEV 399
Query: 357 VDWVLKKMVQQGFVP 371
+ KK++++ P
Sbjct: 400 ACELWKKLLKKNCTP 414
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 126/295 (42%), Gaps = 72/295 (24%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + ++N L Q KRFD + + + + +K + F N++ I AI
Sbjct: 203 PSVRSFNTLLNTLVQNKRFDLVHLMFKNCR-KKFGIVPNVFTCNILVKALCKKNDIDAAI 261
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSA-------KLYGEI------------------- 182
L +MP+ P+V T+ +L VS +++GEI
Sbjct: 262 RVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGY 321
Query: 183 --QGIYTSAAKL----------------GVEIDACC--------LNIL------------ 204
+G + A K+ GV I+A C LN+L
Sbjct: 322 CKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSS 381
Query: 205 ------LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+ LCE G +E A + + K+NC P+ STL+H LC++G V EA L +
Sbjct: 382 ALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDE 441
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
E I + T+T+N LI+G+ + G++ E +L + M KGC PN+ +Y ++ G
Sbjct: 442 FEKGSIPS-TLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGF 495
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 9/225 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRF-DAIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
+ + P+ YT++++ + RF DA++ D M+ +VE +D + +I+ Y
Sbjct: 305 RGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEP----NDVTYGVIIEAYCK-E 359
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ + + L DM PS V+++L ++ K D
Sbjct: 360 KKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAIT 419
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L+ LC+ G + A + DEF K + P+ TY+ L+ G+CE G + EA L + M
Sbjct: 420 STLIHWLCKEGKVWEARKLFDEFEKGSI-PSTLTYNALIAGMCEGGELPEAARLWDNMVE 478
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+G + T+N+LI G K G EG++++E M GC PN A+Y
Sbjct: 479 KGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 18/219 (8%)
Query: 70 DPISVISVLNQYSKRKDY---------------NPNEALYTLIINKLAQAKRFDAIEDIM 114
DP + +++ Y K+ + PN+ Y +II + K+ + +++
Sbjct: 310 DPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLL 369
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ +EK S VI + G++ A E + NC P + +++ L
Sbjct: 370 DDM-LEKKYIPSSALCCRVIDMLCE-EGKVEVACELWKKLLKKNCTPDNAITSTLIHWLC 427
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E + ++ K G N L+ G+CE G L A + D ++ C PN
Sbjct: 428 KEGKVWEARKLFDEFEK-GSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAF 486
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
TY+ L+ G C+ GN E ++E M G + T+ I
Sbjct: 487 TYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAI 525
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 11/176 (6%)
Query: 213 NLEAAFYVLDEFPK--QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
NL+ A + D K +N N TY ++ L + E L+ ++ I
Sbjct: 113 NLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENL 172
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
F +I G+ + ++ R+ G P+ S+ +L L+ KRF +LV M
Sbjct: 173 FITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF----DLVHLMF 228
Query: 331 --CER---MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
C + + P+ + L+ LC + ++ VL++M GF+P + + I+G
Sbjct: 229 KNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILG 284
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 172/360 (47%), Gaps = 32/360 (8%)
Query: 51 NHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
N + L ++VLK R+ SV+ + + + + Y ++I +L + D +
Sbjct: 34 NKQQLLQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMV 93
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
+ I+Q++K++ + + F +I Y + G +A++ + + + C P+V+ +N +L
Sbjct: 94 QYILQQMKMDGI-NCCEDLFICIINGYKRV-GSAEQALKMFYRIGEFGCKPTVRIYNHLL 151
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
+ L+S + I +YT+ K G+ + NILLK LC+N ++AA + E + C
Sbjct: 152 DALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCP 211
Query: 231 PNVRTYST------------------------------LMHGLCEKGNVEEAFGLLERME 260
P+ TY+T L+ G+C++G +E A LL M
Sbjct: 212 PDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMM 271
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+D + V+++ +I+ L G VE L +M +GC N ++ ++ G + +
Sbjct: 272 DNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLY 331
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA +L MI + P+ V+Y LIHGLC+ +E+ V +M + G +P + + ++
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILI 391
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 147/349 (42%), Gaps = 69/349 (19%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK---------VEKLCRFSDGFFYNVIKIYGN 139
P+ YT +++ L +A + D ++ R K ++ +C+ +G IK+ G
Sbjct: 212 PDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCK--EGRIEVAIKLLGE 269
Query: 140 M---------------------AGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAK 177
M +G + A M C ++ TF L+ + K
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK 329
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
LY E ++ + G E + N L+ GLC NG+LE A V D+ + C PNV TYS
Sbjct: 330 LY-EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYS 388
Query: 238 TLMHG-----------------------------------LCEKGNVEEAFGLLERMESE 262
L+ G LC+ ++A L+E+M E
Sbjct: 389 ILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE 448
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G +T+TFN I GL G+VE MKLLERM+G GC PN +Y E+L L ++ EA
Sbjct: 449 GCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L + + P+ V+Y +++G ++ + + K + +G P
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAP 557
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 17/302 (5%)
Query: 89 PNEALYTLIINKLAQAKRFD---AIEDIMQR----IKVEKLCRFSDGFFYNVIKIYGNMA 141
PN Y +I+ L + + D MQR V DGF +
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGF---------AKS 397
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A ET M S+ C P+V T+ ++++L ++ + + G +
Sbjct: 398 GDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITF 457
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +KGLC NG +E A +L+ C PN+ TY+ L+ L EEAFGL + +E+
Sbjct: 458 NTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + VT+N ++ G + G + E ++L + +G P+S +Y +++ + +
Sbjct: 518 RNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKI 577
Query: 322 AKELVGRMIC-ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +LV R+ + P ++Y LI G CN +E+ L K + QG P W +V
Sbjct: 578 AAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637
Query: 381 GC 382
C
Sbjct: 638 RC 639
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 5/229 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK-IYGNMAGRISKA 147
PN YT +++ L + FD +++++ +E C + F IK + GN GR+ A
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG-CTPNTITFNTFIKGLCGN--GRVEWA 473
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ L M + C P++ T+N +L+ L Y E G++ ++ + N +L G
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES-EGIDA 266
G + A + + + P+ TY+T++H C++G V+ A L+ER+ S +
Sbjct: 534 FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHP 593
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
D +T+ LI G +EE M L++ +G PN A++ ++ D
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFD 642
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 151/292 (51%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L AKR+D +E++M +++ ++ + +N + Y G +
Sbjct: 211 PDIVSYNAVLKGLCMAKRWDDVEELM--VEMVRVGCPPNVATFNTLIAYLCRNGLFEQVH 268
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L MP + C P ++ + +++ + + I + G++ + C N +LKGL
Sbjct: 269 EALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGL 328
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C E A +L E +++C + T++ L+ C+ G V+ LLE+M G D
Sbjct: 329 CSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDV 388
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+ +I+G K+G V+E + LL+ M GC PN+ SY VL GL +R+ +A+EL+
Sbjct: 389 ITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISH 448
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI + P+ V++ LI+ +C + LVE +LK+M+ G P + + ++
Sbjct: 449 MIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 500
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++ L A+R++ ED++ + E C D F N++ + G + + I
Sbjct: 316 PNVVCYNTVLKGLCSAERWEEAEDLLAEMFQED-CPLDDVTF-NILVDFFCQNGLVDRVI 373
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M + C P V T+ V+N L E + + + G + + I+LKGL
Sbjct: 374 ELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGL 433
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C A ++ +Q C PN T++TL++ +C+KG VE+A LL++M G D
Sbjct: 434 CRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDL 493
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++++ +I GL K GK EE ++LL M KG PN+ Y + L + R + ++
Sbjct: 494 ISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDS 553
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + Y +I LC + + MV G +P
Sbjct: 554 IQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 596
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 89/177 (50%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++ LC G + A VLDE P + C ++ C G A L+ + ++G
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG 173
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D+ N+++S + +QG V+EG++LL ++ GC P+ SY VL GL KR+ + +
Sbjct: 174 CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVE 233
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL+ M+ P+ ++ LI LC L E V L +M + G P + M+ I+
Sbjct: 234 ELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATII 290
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 105/240 (43%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G A+ L + + C NLV++ + E + G E D
Sbjct: 156 GGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVS 215
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N +LKGLC + ++ E + C PNV T++TL+ LC G E+ L +M
Sbjct: 216 YNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMP 275
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G D + +I G+ K G E +L RM G PN Y VL GL +R+
Sbjct: 276 EHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWE 335
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA++L+ M E V++ L+ C LV+ V +L++M++ G +P + + ++
Sbjct: 336 EAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVI 395
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+++L+ C G +A L + C + + ++ +CE+G V+E LL ++ S
Sbjct: 147 HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPS 206
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + D V++N ++ GL + ++ +L+ M GC PN A++ ++ L F +
Sbjct: 207 FGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQ 266
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E + +M +P Y +I G+C E + +L +M G P + + ++
Sbjct: 267 VHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVL 325
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 172/360 (47%), Gaps = 32/360 (8%)
Query: 51 NHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
N + L ++VLK R+ SV+ + + + + Y ++I +L + D +
Sbjct: 34 NKQQLLQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMV 93
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
+ I+Q++K++ + + F +I Y + G +A++ + + + C P+V+ +N +L
Sbjct: 94 QYILQQMKMDGI-NCCEDLFICIINGYKRV-GSAEQALKMFYRIGEFGCKPTVRIYNHLL 151
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
+ L+S + I +YT+ K G+ + NILLK LC+N ++AA + E + C
Sbjct: 152 DALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCP 211
Query: 231 PNVRTYST------------------------------LMHGLCEKGNVEEAFGLLERME 260
P+ TY+T L+ G+C++G +E A LL M
Sbjct: 212 PDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMM 271
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+D + V+++ +I+ L G VE L +M +GC N ++ ++ G + +
Sbjct: 272 DNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLY 331
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA +L MI + P+ V+Y LIHGLC+ +E+ V +M + G +P + + ++
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILI 391
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 147/349 (42%), Gaps = 69/349 (19%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK---------VEKLCRFSDGFFYNVIKIYGN 139
P+ YT +++ L +A + D ++ R K ++ +C+ +G IK+ G
Sbjct: 212 PDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCK--EGRIEVAIKLLGE 269
Query: 140 M---------------------AGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAK 177
M +G + A M C ++ TF L+ + K
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK 329
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
LY E ++ + G E + N L+ GLC NG+LE A V D+ + C PNV TYS
Sbjct: 330 LY-EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYS 388
Query: 238 TLMHG-----------------------------------LCEKGNVEEAFGLLERMESE 262
L+ G LC+ ++A L+E+M E
Sbjct: 389 ILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE 448
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G +T+TFN I GL G+VE MKLLERM+G GC PN +Y E+L L ++ EA
Sbjct: 449 GCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L + + P+ V+Y +++G ++ + + K + +G P
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAP 557
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 17/302 (5%)
Query: 89 PNEALYTLIINKLAQAKRFD---AIEDIMQR----IKVEKLCRFSDGFFYNVIKIYGNMA 141
PN Y +I+ L + + D MQR V DGF +
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGF---------AKS 397
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A ET M S+ C P+V T+ ++++L ++ + + G +
Sbjct: 398 GDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTF 457
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +KGLC NG +E A +L+ C PN+ TY+ L+ L EEAFGL + +E+
Sbjct: 458 NTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + VT+N ++ G + G + E ++L + +G P+S +Y +++ + +
Sbjct: 518 RNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKI 577
Query: 322 AKELVGRMIC-ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +LV R+ + P ++Y LI G CN +E+ L K + QG P W +V
Sbjct: 578 AAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637
Query: 381 GC 382
C
Sbjct: 638 RC 639
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 5/229 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK-IYGNMAGRISKA 147
PN YT +++ L + FD +++++ +E C + F IK + GN GR+ A
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG-CTPNTMTFNTFIKGLCGN--GRVEWA 473
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ L M + C P++ T+N +L+ L Y E G++ ++ + N +L G
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES-EGIDA 266
G + A + + + P+ TY+T++H C++G V+ A L+ER+ S +
Sbjct: 534 FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHP 593
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
D +T+ LI G +EE M L++ +G PN A++ ++ D
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFD 642
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 182/375 (48%), Gaps = 26/375 (6%)
Query: 16 IQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKD--------------W---LSP 58
I ++ SAST A P H S HH ++ K W LSP
Sbjct: 47 ISAVRSASTAVG----AAVDPFTDHP-SHHHLAAVDSKSTLLKSYTVTPPIKPWPQRLSP 101
Query: 59 TEVLKIFSNLRDPISVISVLNQYSK-RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI 117
V+ + S ++ + + + K +++ N Y +I KL++A+ F+ +E ++ ++
Sbjct: 102 KRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQL 161
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
++ + + F VI+ YG AGR AI T +PS+ PSV++FN +LN LV K
Sbjct: 162 HKSQI-KCGENLFITVIRNYG-FAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNK 219
Query: 178 LYGEIQGIYTSA-AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ + ++ + K G+ + NIL+K LC+ +++AA VL+E P PNV TY
Sbjct: 220 RFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTY 279
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+T++ G KG++ A + + G D T+ IL+ G K+G+ + +K+++ M+
Sbjct: 280 TTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEE 339
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
PN +Y ++ +K+ E L+ M+ ++ PS ++I LC + VE
Sbjct: 340 NRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEV 399
Query: 357 VDWVLKKMVQQGFVP 371
+ KK++++ P
Sbjct: 400 ACELWKKLLKKNCTP 414
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 135/323 (41%), Gaps = 72/323 (22%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + ++N L Q KRFD + + + + +K + F N++ I AI
Sbjct: 203 PSVRSFNTLLNTLVQNKRFDLVHLMFKNCR-KKFGIVPNVFTCNILVKALCKKNDIDAAI 261
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSA-------KLYGEI------------------- 182
L +MP+ P+V T+ +L VS +++GEI
Sbjct: 262 RVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGY 321
Query: 183 --QGIYTSAAKL----------------GVEIDACC--------LNIL------------ 204
+G + A K+ GV I+A C LN+L
Sbjct: 322 CKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSS 381
Query: 205 ------LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+ LCE G +E A + + K+NC P+ STL+H LC++G V EA L +
Sbjct: 382 ALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDE 441
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
E I + T+T+N LI+G+ + G++ E +L + M KGC PN+ +Y ++ G
Sbjct: 442 FEKGSIPS-TLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGN 500
Query: 319 FPEAKELVGRMICERMSPSFVSY 341
E ++ M+ P+ +Y
Sbjct: 501 AREGIRVMEEMLDNGCLPNKATY 523
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 9/225 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRF-DAIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
+ + P+ YT++++ + RF DA++ D M+ +VE +D + +I+ Y
Sbjct: 305 RGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEP----NDVTYGVIIEAYCK-E 359
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ + + L DM PS V+++L ++ K D
Sbjct: 360 KKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAIT 419
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L+ LC+ G + A + DEF K + P+ TY+ L+ G+CE G + EA L + M
Sbjct: 420 STLIHWLCKEGKVWEARKLFDEFEKGSI-PSTLTYNALIAGMCEGGELPEAARLWDNMVE 478
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+G + T+N+LI G K G EG++++E M GC PN A+Y
Sbjct: 479 KGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 18/219 (8%)
Query: 70 DPISVISVLNQYSKRKDY---------------NPNEALYTLIINKLAQAKRFDAIEDIM 114
DP + +++ Y K+ + PN+ Y +II + K+ + +++
Sbjct: 310 DPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLL 369
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ +EK S VI + G++ A E + NC P + +++ L
Sbjct: 370 DDM-LEKKYIPSSALCCRVIDMLCE-EGKVEVACELWKKLLKKNCTPDNAITSTLIHWLC 427
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E + ++ K G N L+ G+CE G L A + D ++ C PN
Sbjct: 428 KEGKVWEARKLFDEFEK-GSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAF 486
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
TY+ L+ G C+ GN E ++E M G + T+ I
Sbjct: 487 TYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAI 525
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 11/176 (6%)
Query: 213 NLEAAFYVLDEFPK--QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
NL+ A + D K +N N TY ++ L + E L+ ++ I
Sbjct: 113 NLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENL 172
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
F +I G+ + ++ R+ G P+ S+ +L L+ KRF +LV M
Sbjct: 173 FITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF----DLVHLMF 228
Query: 331 --CER---MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
C + + P+ + L+ LC + ++ VL++M GF+P + + I+G
Sbjct: 229 KNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILG 284
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 148/309 (47%), Gaps = 3/309 (0%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+S + +LN+ ++ + PN YT++IN + R + +I+ + + L + G Y
Sbjct: 394 VSALELLNEMVAKR-FEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVG--Y 450
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + G I +A++ +M C P + TFN ++N L E +Y
Sbjct: 451 NCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFL 510
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
GV + N L+ +++ AF ++DE + C + TY+ L+ LC+ G VE+
Sbjct: 511 EGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEK 570
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
GL E M +GI ++ NILISGL + GKV + +K L+ M +G P+ +Y ++
Sbjct: 571 GLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLIN 630
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
GL EA L ++ E + P ++Y LI C++ + D +L K V GF+P
Sbjct: 631 GLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIP 690
Query: 372 RMGMWREIV 380
W ++
Sbjct: 691 NEVTWSILI 699
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 158/318 (49%), Gaps = 8/318 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+SP ++ K+ D + + + + +K Y+ L+I+KL F IE +++
Sbjct: 64 ISPFQLCKLLELPLDIPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLK 123
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM-PSYNCWPSVKTFNLVLNLLV 174
++K E L F + F ++K YG AG +A L DM Y+C P+ K++N+VL++LV
Sbjct: 124 QMKDEGL-LFKESLFILIMKHYGK-AGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILV 181
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
++ GV +++K LC +++A +L + K C PN
Sbjct: 182 DGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSV 241
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y TL+H LCE V EA LLE M + D TFN +I GL + G++ E KLL+RM
Sbjct: 242 IYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRM 301
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG-LCNQKL 353
+G ++ +Y +++GL + EA+ L+ ++ +P+ V Y LI G + + +
Sbjct: 302 LLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI----PNPNTVLYNTLISGYVASGRF 357
Query: 354 VEDVDWVLKKMVQQGFVP 371
E D + MV G+ P
Sbjct: 358 EEAKDLLYNNMVIAGYEP 375
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 145/293 (49%), Gaps = 1/293 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NPN LY +I+ + RF+ +D++ V D + +N++ G + A
Sbjct: 338 NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYE-PDAYTFNIMIDGLVKKGYLVSA 396
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E L +M + P+V T+ +++N E I S + G+ ++ N L+
Sbjct: 397 LELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICA 456
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC++GN+E A + E + C+P++ T+++L++GLC+ +EEA L M EG+ A+
Sbjct: 457 LCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIAN 516
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TVT+N L+ + +++ KL++ M +GC ++ +Y ++ L + L
Sbjct: 517 TVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFE 576
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + + P+ +S LI GLC V D L+ M+ +G P + + ++
Sbjct: 577 EMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLI 629
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG-KGCYPNSASYQEVLYGL 313
LL++M+ EG+ F +++ K G + +LL M G C P SY VL L
Sbjct: 121 LLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDIL 180
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+D A + M+ +SP+ ++ ++ LC V+ +L+ M + G VP
Sbjct: 181 VDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNS 240
Query: 374 GMWREIV 380
+++ ++
Sbjct: 241 VIYQTLI 247
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 156/319 (48%), Gaps = 6/319 (1%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
LSP V+K+ + ++P S +S+ + ++ Y+ ++ I+ +L K + I++
Sbjct: 8 LSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVE 67
Query: 116 RIKVEKLCRFSDGFFYNVIKIYG--NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
I+ +K C+ + VIK Y +M + + + ++ + C P ++++N +LN L
Sbjct: 68 LIRTQK-CKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEI--FGCQPGIRSYNSLLNAL 124
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ + + E + + +G+ + NIL+K C + A +L+ +Q P+V
Sbjct: 125 IESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDV 184
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+Y TL++ L + G + +A L + M G+ D +NILI G K+G + ++ ER
Sbjct: 185 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWER 244
Query: 294 -MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+KG YPN SY ++ GL +F E+ E+ RM +Y LIHGLC
Sbjct: 245 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSG 304
Query: 353 LVEDVDWVLKKMVQQGFVP 371
++ V K+M + G P
Sbjct: 305 NLDGATRVYKEMAENGVSP 323
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 158/335 (47%), Gaps = 39/335 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKA 147
PN Y ++IN L + +FD +I R+K + R D + Y+ + I+G +G + A
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE--RGQDLYTYSTL-IHGLCGSGNLDGA 309
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE----------------------IQGI 185
+M P V +N +LN + A E I+G+
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 369
Query: 186 YTSAA--------KLGVEIDACC----LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ +A +L E D C +L+ GLC+NG L A +L+E + +
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT 429
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
YS++++GLC +G ++E G+L++M G + N +I+G + K+E+ ++
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M KGC+P +Y ++ GL +RF EA LV M+ + P+ ++Y L++GLC K
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
++ + + +++GF P + M I+ G + GK
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 130/276 (47%), Gaps = 16/276 (5%)
Query: 81 YSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
Y + +PN Y ++I + K+FD ++++ + + GF +V YG +
Sbjct: 139 YFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM-------WEQGFSPDVFS-YGTL 190
Query: 141 A------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LG 193
G +S A++ +MP P V +N++++ I+ K
Sbjct: 191 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
V + N+++ GLC+ G + +F + K ++ TYSTL+HGLC GN++ A
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 310
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+ + M G+ D V +N +++G + G++EE ++L + M+ +GC SY ++ GL
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGL 369
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+ + EA + + + ++Y L+HGLC
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ + L M + C P+ N V+N V A + + + G
Sbjct: 443 GRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTY 502
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GL + A+ ++ E + +PN+ TYS LM+GLC+ ++ A L +
Sbjct: 503 NTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALE 562
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G D NI+I GL GKVE+ ++L MK + C PN ++ ++ G + F
Sbjct: 563 KGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFER 622
Query: 322 AKEL 325
A ++
Sbjct: 623 ASKI 626
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 6/211 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ +IN L + R D + ++ ++ + C+ + VI + A ++ A+ +
Sbjct: 432 YSSMINGLCREGRLDEVAGVLDQM-TKHGCKPNPHVCNAVINGFVR-ASKLEDALRFFGN 489
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S C+P+V T+N ++N L A+ + E + G + + ++L+ GLC+
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A + + ++ +P+V+ ++ ++HGLC G VE+A L M+ + VT N
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNT 609
Query: 274 LISGLRKQGKVEEGMK----LLERMKGKGCY 300
L+ G K E K +L+ CY
Sbjct: 610 LMEGFYKVRDFERASKIWDHILQSWSSSNCY 640
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 114/255 (44%), Gaps = 2/255 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++I L + + D I + + + C +D Y V+ G ++KA+ L +
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCC--ADSMTYGVLVHGLCKNGYLNKALSILEE 419
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+ ++ ++N L E+ G+ K G + + N ++ G
Sbjct: 420 AENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASK 479
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
LE A + C P V TY+TL++GL + EA+ L++ M +G + +T+++
Sbjct: 480 LEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSL 539
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L++GL + K++ + L + KG P+ + +++GL + +A +L M +
Sbjct: 540 LMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599
Query: 334 MSPSFVSYKKLIHGL 348
P+ V++ L+ G
Sbjct: 600 CVPNLVTHNTLMEGF 614
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 48/239 (20%)
Query: 150 TLFD----MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
++FD P Y+ P V F+ +L L KL + I + ++
Sbjct: 28 SIFDSVTRFPGYSHTPYV--FHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVI 85
Query: 206 KGLCENGNLEAAFYVLDEFPKQN----CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
K +N + A LD F + + C+P +R+Y++L++ L E +EA E+
Sbjct: 86 KAYAKNSMPDQA---LDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ + T+NILI K+ R KK+F +
Sbjct: 143 MGLSPNLQTYNILI-------------KISCR----------------------KKQFDK 167
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
AKEL+ M + SP SY LI+ L + D + +M ++G P + + ++
Sbjct: 168 AKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILI 226
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 159/327 (48%), Gaps = 8/327 (2%)
Query: 61 VLKIFSNLRDPISVISVLNQY-SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
+L++ + RDP + +S L S R + P + L ++ +LA + + ++
Sbjct: 16 LLELIKSERDPANALSHLELLVSTRPAFPPPQPLIFHLLRRLATSSPSHLPRLLGLLPRM 75
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKL 178
RFS+ V+ + A A+ D+PS C P V++ N +L+ V A+
Sbjct: 76 RHRPRFSESAALVVLSAFSR-ALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARR 134
Query: 179 YGEIQGIYTSAA--KLGVEI--DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
Y + + S + G I + NI+L+ LC G+++ A + ++ P+
Sbjct: 135 YSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRV 194
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TYSTLM GL + ++ A LL+ M + G+ AD V +N L+SG + G E+ MK+ E++
Sbjct: 195 TYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQL 254
Query: 295 -KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+ G PN A+Y+ +L GL RF EA E+ RM+ V+Y LIHGLC
Sbjct: 255 VRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGD 314
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+ V MV+ G V + ++ ++
Sbjct: 315 VDSAARVYSDMVKAGLVLDVSVYNSLI 341
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 136/311 (43%), Gaps = 10/311 (3%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQA----KRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+L Q +P++ + +I+ L + + F+ +ED R E+L D F Y+
Sbjct: 390 LLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILED--ARNSGEEL----DVFSYS 443
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ GR A E +M C P+ +N ++N + IY
Sbjct: 444 SMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSN 503
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G N L+ GLC+ + A + E ++ +P++RTY++L+ GLC V+ A
Sbjct: 504 GCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVA 563
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ + + G+ D + NILI GL GKV+E + MK K C PN +Y ++ G
Sbjct: 564 LRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDG 623
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+ +A L ++ + P V+Y I GLC+ + +L +++ G +P
Sbjct: 624 FYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPT 683
Query: 373 MGMWREIVGCV 383
+ W +V V
Sbjct: 684 VITWSILVRAV 694
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 136/359 (37%), Gaps = 42/359 (11%)
Query: 33 LASPSASHQDSDHHAYK-LNHKDWLSPTE---VLKIFSNLRDPISVISVLNQYSKRKDYN 88
LA+ S SH + H+ S + VL FS P + ++ N
Sbjct: 57 LATSSPSHLPRLLGLLPRMRHRPRFSESAALVVLSAFSRALMPDAALAAFRDLPSLLGCN 116
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR--FSDGFFYNVIKIYGNMAGRISK 146
P + +++ +A+R+ + + R + YN+I G + +
Sbjct: 117 PGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDR 176
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ + P T++ +++ L + GV+ DA C N LL
Sbjct: 177 AVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLS 236
Query: 207 GLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G G E A V ++ + PN+ TY ++ GLC+ G +EA + RM +
Sbjct: 237 GCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQ 296
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL--------------- 310
ADTVT+ ILI GL + G V+ ++ M G + + Y ++
Sbjct: 297 ADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKF 356
Query: 311 -------------------YGLLDKKRFPEAKELVGRMICE-RMSPSFVSYKKLIHGLC 349
GLLD EA EL+ ++ + SP V++ LIHGLC
Sbjct: 357 WDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLC 415
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 106/262 (40%), Gaps = 72/262 (27%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ +IN+ + R ++ + + V+ C+ + + +I + ++ +I+ AI+ +
Sbjct: 442 YSSMINRFCKDGRTHDANEVYKNM-VKDGCKPNSHVYNALINGFCRVS-KINDAIKIYIE 499
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGE-----------------------IQG------ 184
M S C P++ T+N +++ L A+ Y E I+G
Sbjct: 500 MTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKK 559
Query: 185 ------IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
I+ G+++D NIL+ GLC G ++ AF + E ++NC PN+ TY+T
Sbjct: 560 VDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNT 619
Query: 239 LM-----------------------------------HGLCEKGNVEEAFGLLERMESEG 263
LM GLC E LL + + G
Sbjct: 620 LMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATG 679
Query: 264 IDADTVTFNILISGLRKQGKVE 285
I +T++IL+ + K G ++
Sbjct: 680 IMPTVITWSILVRAVIKYGPIQ 701
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 4/176 (2%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
S L + + + P+ Y +I L + K+ D I I L D +N++
Sbjct: 529 SSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGL--QVDVMVHNIL- 585
Query: 136 IYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
I+G AG++ +A +M NC P++ T+N +++ + ++T+ G+
Sbjct: 586 IHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGL 645
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ D N +KGLC +L+E P V T+S L+ + + G ++
Sbjct: 646 KPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 156/319 (48%), Gaps = 6/319 (1%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
LSP V+K+ + ++P S +S+ + ++ Y+ ++ I+ +L K + I++
Sbjct: 8 LSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVE 67
Query: 116 RIKVEKLCRFSDGFFYNVIKIYG--NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
I+ +K C+ + VIK Y +M + + + ++ + C P ++++N +LN L
Sbjct: 68 LIRTQK-CKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEI--FGCQPGIRSYNSLLNAL 124
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ + + E + + +G+ + NIL+K C + A +L+ +Q P+V
Sbjct: 125 IESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDV 184
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+Y TL++ L + G + +A L + M G+ D +NILI G K+G + ++ ER
Sbjct: 185 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWER 244
Query: 294 -MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+KG YPN SY ++ GL +F E+ E+ RM +Y LIHGLC
Sbjct: 245 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSG 304
Query: 353 LVEDVDWVLKKMVQQGFVP 371
++ V K+M + G P
Sbjct: 305 NLDGATRVYKEMAENGVSP 323
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 158/335 (47%), Gaps = 39/335 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKA 147
PN Y ++IN L + +FD +I R+K + R D + Y+ + I+G +G + A
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE--RGQDLYTYSTL-IHGLCGSGNLDGA 309
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE----------------------IQGI 185
+M P V +N +LN + A E I+G+
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 369
Query: 186 YTSAA--------KLGVEIDACC----LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ +A +L E D C +L+ GLC+NG L A +L+E + +
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT 429
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
YS++++GLC +G ++E G+L++M G + N +I+G + K+E+ ++
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M KGC+P +Y ++ GL +RF EA LV M+ + P+ ++Y L++GLC K
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
++ + + +++GF P + M I+ G + GK
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ + L M + C P+ N V+N V A + + + G
Sbjct: 443 GRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTY 502
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GL + A+ ++ E + +PN+ TYS LM+GLC+ ++ A L +
Sbjct: 503 NTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALE 562
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G D NI+I GL GKVE+ ++L MK + C PN ++ ++ G + F
Sbjct: 563 KGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFER 622
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A ++ ++ P +SY + GLC+ + D L V +G +P W +V
Sbjct: 623 ASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVR 682
Query: 382 CV 383
V
Sbjct: 683 AV 684
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 130/276 (47%), Gaps = 16/276 (5%)
Query: 81 YSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
Y + +PN Y ++I + K+FD ++++ + + GF +V YG +
Sbjct: 139 YFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM-------WEQGFSPDVFS-YGTL 190
Query: 141 A------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LG 193
G +S A++ +MP P V +N++++ I+ K
Sbjct: 191 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
V + N+++ GLC+ G + +F + K ++ TYSTL+HGLC GN++ A
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 310
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+ + M G+ D V +N +++G + G++EE ++L + M+ +GC SY ++ GL
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGL 369
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+ + EA + + + ++Y L+HGLC
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 120/255 (47%), Gaps = 2/255 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ +IN L + R D + ++ ++ + C+ + VI + A ++ A+ +
Sbjct: 432 YSSMINGLCREGRLDEVAGVLDQM-TKHGCKPNPHVCNAVINGFVR-ASKLEDALRFFGN 489
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S C+P+V T+N ++N L A+ + E + G + + ++L+ GLC+
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A + + ++ +P+V+ ++ ++HGLC G VE+A L M+ + VT N
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNT 609
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ G K E K+ + + G P+ SY L GL R +A + +
Sbjct: 610 LMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 669
Query: 334 MSPSFVSYKKLIHGL 348
+ P+ +++ L+ +
Sbjct: 670 VLPTAITWNILVRAV 684
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 7/244 (2%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--VEKLCRFSDGFFY 131
V VL+Q +K PN + +IN +A + +ED ++ V K C F Y
Sbjct: 448 VAGVLDQMTKH-GCKPNPHVCNAVINGFVRASK---LEDALRFFGNMVSKGC-FPTVVTY 502
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + + A R S+A + +M P++ T++L++N L K ++ A +
Sbjct: 503 NTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALE 562
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G + D NI++ GLC +G +E A + E ++ C PN+ T++TLM G + + E
Sbjct: 563 KGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFER 622
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A + + + G D +++NI + GL ++ + + L +G P + ++ ++
Sbjct: 623 ASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVR 682
Query: 312 GLLD 315
+LD
Sbjct: 683 AVLD 686
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAG 142
K + PN Y+L++N L Q K+ D ++ + +EK + D +N+I I+G +G
Sbjct: 527 HKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQ-ALEKGFK-PDVKMHNII-IHGLCSSG 583
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ A++ +M C P++ T N ++ + + I+ + G + D N
Sbjct: 584 KVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYN 643
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
I LKGLC + A L++ + P T++ L+ + + G
Sbjct: 644 ITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNG 688
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 48/239 (20%)
Query: 150 TLFD----MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
++FD P Y+ P V F+ +L L KL + I + ++
Sbjct: 28 SIFDSVTRFPGYSHTPYV--FHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVI 85
Query: 206 KGLCENGNLEAAFYVLDEFPKQN----CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
K +N + A LD F + + C+P +R+Y++L++ L E +EA E+
Sbjct: 86 KAYAKNSMPDQA---LDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ + T+NILI K+ R KK+F +
Sbjct: 143 MGLSPNLQTYNILI-------------KISCR----------------------KKQFDK 167
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
AKEL+ M + SP SY LI+ L + D + +M ++G P + + ++
Sbjct: 168 AKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILI 226
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 177/392 (45%), Gaps = 58/392 (14%)
Query: 33 LASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEA 92
+++ + S + H L+ +P ++L D + + +L+ SK+ ++ PN +
Sbjct: 31 ISNSTLSFASTQQHTATLSSN--FTPAQLLDTLRRQNDETAALRLLSWASKQPNFRPNSS 88
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
+Y I+ KL + F++++DI+Q +K C+ G I Y + + I +
Sbjct: 89 IYEEILRKLGKVGSFNSMKDILQEMKGLD-CQIDRGVLLIFIDSYAKF--ELYEEILCIV 145
Query: 153 DMPSYNCWPSVKT--FNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
++ ++ T +N +LN+LV ++ ++++ G++ D NIL+K LC+
Sbjct: 146 EVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCK 205
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLM------------------------------ 240
+ A V++E P+ +T++TLM
Sbjct: 206 AHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVT 265
Query: 241 -----HGLCEKGNVEEAFGLLERMESE----------------GIDADTVTFNILISGLR 279
HG C++G +EEA ++ M +E G D T+N+LI L
Sbjct: 266 VNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLC 325
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
+GK++E + LL M+ GC N +Y ++ G K+ EA+E+ +M + +S + V
Sbjct: 326 YRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSV 385
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y LI GLC + V++ ++ +M+ +G P
Sbjct: 386 TYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKP 417
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 146/311 (46%), Gaps = 30/311 (9%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
LY ++N L + +E++ + V K + F +IK A +I AI +
Sbjct: 160 LYNFLLNVLVDGNKLKLVENVHSTM-VSKGIKPDVSTFNILIKALCK-AHQIRPAILVME 217
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC------LNILLK 206
+M SY P KTF ++ + G + G + ++ +DA C +N+L+
Sbjct: 218 EMSSYGLVPDEKTFTTLMQGFIEE---GNMDGAFRVKEQM---LDAGCPVTNVTVNVLVH 271
Query: 207 GLCENGNLEAAFYVLDEFPKQN----------------CEPNVRTYSTLMHGLCEKGNVE 250
G C+ G +E A +DE + C+P+ TY+ L+ LC +G ++
Sbjct: 272 GFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQ 331
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA GLL ME G + +T+N LI G K K+EE ++ ++M+ +G NS +Y ++
Sbjct: 332 EALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLI 391
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
GL +R EA +L+ +MI E + P +Y ++ C + ++ +++ M G
Sbjct: 392 DGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCE 451
Query: 371 PRMGMWREIVG 381
P + + ++G
Sbjct: 452 PDIVTYGTLIG 462
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 132/252 (52%), Gaps = 3/252 (1%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F YN++ G++ +A+ L +M C +V T+N +++ K E + I+
Sbjct: 313 DEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIF 372
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
G+ ++ N L+ GLC++ ++ A ++D+ + +P+ TY++++ C +
Sbjct: 373 DQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCRE 432
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G++++A +++ M S G + D VT+ LI GL K G+VE +LL ++ KG +Y
Sbjct: 433 GDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAY 492
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ--KLVEDVDWVLKKM 364
V+ L +KR EA L M + +P +YK + GL N + E VD+V+ +M
Sbjct: 493 NPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVI-EM 551
Query: 365 VQQGFVPRMGMW 376
+++GF+P +
Sbjct: 552 IEKGFLPEFSSF 563
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 96/186 (51%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+Y G + D N+L+ LC G L+ A +L E C NV TY+TL+ G C
Sbjct: 301 LYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFC 360
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ +EEA + ++ME +G+ ++VT+N LI GL K +V+E +L+++M +G P+
Sbjct: 361 KNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKF 420
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y +L + +A ++V M P V+Y LI GLC VE +L+ +
Sbjct: 421 TYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSI 480
Query: 365 VQQGFV 370
+G V
Sbjct: 481 QLKGMV 486
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 136/287 (47%), Gaps = 9/287 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K P+E Y ++I+ L + +++ +++ R + YN + I G
Sbjct: 306 KNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCAR--NVITYNTL-IDGFCKN 362
Query: 143 RISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ + E +FD M + T+N +++ L ++ E + G++ D
Sbjct: 363 KKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTY 422
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L C G+++ A ++ CEP++ TY TL+ GLC+ G VE A LL ++
Sbjct: 423 NSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQL 482
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK-RFP 320
+G+ +N +I L K+ + +E M+L M+ KG P++ +Y+ V GL +
Sbjct: 483 KGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIG 542
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCN----QKLVEDVDWVLKK 363
EA + V MI + P F S+ L GLC+ L++ VD V++K
Sbjct: 543 EAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEK 589
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 188/415 (45%), Gaps = 52/415 (12%)
Query: 18 SLSSASTITRKR-TFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLR---DPIS 73
S+S A T+T + L PS++ + ++ L+ D +K+ +LR D +
Sbjct: 13 SISQAVTLTHHSFSLKLTPPSSTISFASPNSAALSSSD-------VKLLDSLRSQADDSA 65
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ + N SK+ +++P ALY I+ +L ++ FD + I++ +K C F +
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMK-NSGCEMGTSPFLIL 124
Query: 134 IKIYGN--MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
I+ Y + I + + D + P +N +LNLLV ++ + +
Sbjct: 125 IESYAQFELQDEILGVVHWMID--DFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSV 182
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM----------- 240
G++ D N+L+K LC L A +L++ P P+ +T++T+M
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDG 242
Query: 241 ------------------------HGLCEKGNVEEAFGLLERMESE-GIDADTVTFNILI 275
HG C++G VE+A ++ M ++ G D TFN L+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+GL K G V+ +++++ M +G P+ +Y V+ GL EA E + +MI S
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCS 362
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
P+ V+Y LI LC + VE+ + + + +G +P + + ++ + +++R
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 144/306 (47%), Gaps = 2/306 (0%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++ + + S + + P++ + ++N L +A +IM + E D + YN +
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY--DPDVYTYNSV 336
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G + +A+E L M + +C P+ T+N +++ L E + G+
Sbjct: 337 ISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D C N L++GLC N A + +E + CEP+ TY+ L+ LC KG ++EA
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+L++ME G +T+N LI G K K+ E ++ + M+ G NS +Y ++ GL
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+R +A +L+ +MI E P +Y L+ C ++ +++ M G P +
Sbjct: 517 KSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 375 MWREIV 380
+ ++
Sbjct: 577 TYGTLI 582
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 133/248 (53%), Gaps = 4/248 (1%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F YN++ G++ +A+ L M C SV T+N +++ A E + I+
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIF 493
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
GV ++ N L+ GLC++ +E A ++D+ + +P+ TY++L+ C
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRG 553
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G++++A +++ M S G + D VT+ LISGL K G+VE KLL ++ KG +Y
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAY 613
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICE-RMSPSFVSYKKLIHGLCN--QKLVEDVDWVLKK 363
V+ GL K++ EA L M+ + +P VSY+ + GLCN + E VD+ L +
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDF-LVE 672
Query: 364 MVQQGFVP 371
++++GFVP
Sbjct: 673 LLEKGFVP 680
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 156/349 (44%), Gaps = 38/349 (10%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+E +T I+ + D I +++ VE C +S+ NVI GR+ A+
Sbjct: 222 PDEKTFTTIMQGYIEEGDLDGALRIREQM-VEFGCSWSN-VSVNVIVHGFCKEGRVEDAL 279
Query: 149 ETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +M + + + P TFN ++N L A I + G + D N ++ G
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA--------------- 252
LC+ G ++ A LD+ ++C PN TY+TL+ LC++ VEEA
Sbjct: 340 LCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 253 --------------------FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
L E M S+G + D T+N+LI L +GK++E + +L+
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+M+ GC + +Y ++ G + EA+E+ M +S + V+Y LI GLC +
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVDS 401
VED ++ +M+ +G P + ++ G D + + + + S
Sbjct: 520 RVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTS 568
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 170/362 (46%), Gaps = 15/362 (4%)
Query: 30 TFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNP 89
+F+ SPS + Q + +P ++ D S++ +L+ SK+ ++ P
Sbjct: 54 SFSTLSPSPTTQLPQN----------FTPKQLRDALRRQSDEDSILDLLDWASKQPNFVP 103
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
+ +Y ++ KL + F ++ ++Q +K C G F +I+ Y +A+
Sbjct: 104 SSVIYEEVLRKLGKDGSFGSMRRVLQEMK-HTGCEIRRGTFLILIESYAKFE-LFDEAVA 161
Query: 150 TLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M + T+N +LN+LV ++ + + G++ D NIL+K L
Sbjct: 162 VVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKAL 221
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C + A +++E P+ +T++TLM G E+GN+ A + E+M + G +
Sbjct: 222 CRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSN 281
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT N+L+ G K+G++EE + ++ M +G P+ ++ ++ GL A E++
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDV 341
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
M+ E P +Y LI GLC VE+ +L +M+ + F P + ++ T K+
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLIS--TLCKE 399
Query: 389 NR 390
N+
Sbjct: 400 NQ 401
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 142/301 (47%), Gaps = 9/301 (2%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIIN---KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
V+S +++ S + + P+ + ++N ++ K I D+M + + D F
Sbjct: 300 VLSFIDEMSN-EGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFD-----PDIFT 353
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN + G + +A+E L M + P+ T+N +++ L E +
Sbjct: 354 YNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLT 413
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G+ D C N L++GLC N A + +E + C P+ TY+ L+ LC +G +E
Sbjct: 414 SKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLE 473
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA LL+ MES G + VT+N LI G K ++EE ++ + M+ +G N +Y ++
Sbjct: 474 EALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLI 533
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
GL +R EA +L+ +M+ E + P +Y L+ C ++ +++ M G
Sbjct: 534 DGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCE 593
Query: 371 P 371
P
Sbjct: 594 P 594
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 158/332 (47%), Gaps = 37/332 (11%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK----VEKLCRFS---- 126
+ +LNQ R D++PN Y +I+ L + + + ++ + + + +C F+
Sbjct: 371 VEILNQMILR-DFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 429
Query: 127 -------------------------DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWP 161
D F YN++ GR+ +A+ L +M S C
Sbjct: 430 GLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSR 489
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
+V T+N +++ K E + I+ G+ + N L+ GLC+N +E A ++
Sbjct: 490 NVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLM 549
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
D+ + +P+ TY++L+ C G++++A +++ M S G + D+VT+ LI GL K
Sbjct: 550 DQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKA 609
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G+VE +LL ++ KG +Y V+ L +KR EA L M+ + P V+Y
Sbjct: 610 GRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTY 669
Query: 342 KKLIHGLCN--QKLVEDVDWVLKKMVQQGFVP 371
K + GLC+ + E VD+ L +M +GF+P
Sbjct: 670 KVVFRGLCSGGGPIGEAVDF-LVEMTDKGFLP 700
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 132/295 (44%), Gaps = 35/295 (11%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GRI + + + +M + P TFN ++N L I + G + D
Sbjct: 295 GRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTY 354
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA--------- 252
N L+ GLC+ G +E A +L++ ++ PN TY+TL+ LC++ VEEA
Sbjct: 355 NSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTS 414
Query: 253 --------------------------FGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
L E M+++G D T+N+LI L +G++EE
Sbjct: 415 KGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEE 474
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+ LL+ M+ GC N +Y ++ G KR EA+E+ M + +S + V+Y LI
Sbjct: 475 ALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLID 534
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVDS 401
GLC + VE+ ++ +M+ +G P + ++ D + + +T+ S
Sbjct: 535 GLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTS 589
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 43/335 (12%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+ ++ ++N + P+ + ++I L +A + +M+ + L + F
Sbjct: 192 LKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSP-DEKTFT 250
Query: 132 NVIKIY---GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+++ + GNM G A+ M + C S T N++++ E+
Sbjct: 251 TLMQGFIEEGNMNG----ALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDE 306
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ G D N L+ GLC G+++ A +LD ++ +P++ TY++L+ GLC+ G
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE---------------------- 286
VEEA +L +M +TVT+N LIS L K+ +VEE
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426
Query: 287 -------------GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
M+L E MK KGC+P+ +Y ++ L + R EA L+ M
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
S + V+Y LI G C K +E+ + + +M QG
Sbjct: 487 CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 152/308 (49%), Gaps = 6/308 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+LN+ S + P+ YT ++ L A+R+D ++ + + V+K C ++ F +++
Sbjct: 244 ILNRLSSY-GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEM-VDKKCVPNEVTFDMLVRF 301
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ G + +AI+ L M + C P+ N+V+N + + + G
Sbjct: 302 FCR-GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNP 360
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D +L+GLC G E A +L E ++NC PN T++T + LC+KG +E+A L+
Sbjct: 361 DTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLI 420
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E M G VT+N L+ G QG+V+ ++L + C PN+ +Y +L GL
Sbjct: 421 ELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHA 477
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+R A EL+ MI + + V++ L+ C + VE+ ++ +M++ G P + +
Sbjct: 478 ERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITF 537
Query: 377 REIVGCVT 384
++ +T
Sbjct: 538 NTLLDGIT 545
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 145/306 (47%), Gaps = 6/306 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I VL Q S+ PN L ++IN + + R D D + + + C D Y +
Sbjct: 312 IQVLQQMSQH-GCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG-CN-PDTISYTTV 368
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
AGR A E L +M NC P+ TFN + +L L + + + G
Sbjct: 369 LRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGC 428
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ N L+ G C G +++A + + P CEPN TY+TL+ GLC ++ A
Sbjct: 429 SVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAE 485
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL M + + VTFN+L+S ++G VEE M+L+ +M GC PN ++ +L G+
Sbjct: 486 LLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGIT 545
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
EA EL+ ++ + +S ++Y ++ L + E+ +L + G P++G
Sbjct: 546 KDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVG 605
Query: 375 MWREIV 380
M+ +I+
Sbjct: 606 MYNKIL 611
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 143/290 (49%), Gaps = 7/290 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-YNVIKIYGNMAG 142
RK+ PNE + I L Q IE ++ I++ S G YN + + G
Sbjct: 390 RKNCPPNEVTFNTFICILCQK---GLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQG 446
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A+E ++P C P+ T+ +L L A+ + + ++A N
Sbjct: 447 RVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFN 503
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+L+ C+ G +E A ++++ + C PN+ T++TL+ G+ + N EEA LL + S+
Sbjct: 504 VLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSK 563
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ DT+T++ ++ L ++ + EE +++L ++ G P Y ++L+ L + +A
Sbjct: 564 GVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQA 623
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+ M+ P+ +Y LI GL ++ L+++ +VL ++ +G + +
Sbjct: 624 IDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSK 673
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 110/223 (49%)
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A+ L +M + C P++ T+N+++N + + + I + G + D +L
Sbjct: 205 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVL 264
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
KGLC + + E + C PN T+ L+ C G VE A +L++M G
Sbjct: 265 KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCT 324
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+T NI+I+ + KQG+V++ L M GC P++ SY VL GL R+ AKEL
Sbjct: 325 PNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKEL 384
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ M+ + P+ V++ I LC + L+E +++ M + G
Sbjct: 385 LPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG 427
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 130/272 (47%), Gaps = 2/272 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ P+ YT+++ + ++ F +++ ++ K C + YNVI GR
Sbjct: 180 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRA-KGCT-PNIVTYNVIINGMCREGR 237
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A E L + SY P + ++ VL L +A+ + +++ ++ + ++
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++ C G +E A VL + + C PN + +++ +C++G V++A+ L M G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ DT+++ ++ GL + G+ E +LL M K C PN ++ + L K +A
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+L+ M S V+Y L+HG C Q V+
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVD 449
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 89/158 (56%)
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
++ C+P+V TY+ L+ +C+ EA +L+ M ++G + VT+N++I+G+ ++G+V+
Sbjct: 180 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 239
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
+ ++L R+ G P+ SY VL GL +R+ + K L M+ ++ P+ V++ L+
Sbjct: 240 DAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLV 299
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
C +VE VL++M Q G P + ++ +
Sbjct: 300 RFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAI 337
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 35/205 (17%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+LL+ +C++ A VLDE + C PN+ TY+ +++G+C +G V++A +L R+ S
Sbjct: 191 TVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSS 250
Query: 262 EGIDADT-----------------------------------VTFNILISGLRKQGKVEE 286
G D VTF++L+ + G VE
Sbjct: 251 YGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVER 310
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+++L++M GC PN+ V+ + + R +A + + M +P +SY ++
Sbjct: 311 AIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLR 370
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
GLC E +L +MV++ P
Sbjct: 371 GLCRAGRWEHAKELLPEMVRKNCPP 395
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G VT+ +L+ + K E M +L+ M+ KGC PN +Y ++ G+ + R
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+AKE++ R+ P VSY ++ GLC + +DV + +MV + VP
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVP 290
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 147/296 (49%), Gaps = 5/296 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT ++ L +KR+D +E++ + +EK C ++ F +I+ + G + +AI
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEM-MEKNCMPNEVTFDMLIRFFCR-GGMVERAI 302
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L M + C + N+V+N + + + G D +LKGL
Sbjct: 303 QVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGL 362
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C A +L E + NC PN T++T + LC+KG +E+A L+E+M+ G
Sbjct: 363 CRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGV 422
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N L++G QG ++ ++L M C PN+ +Y +L GL + +R A ELV
Sbjct: 423 VTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAE 479
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
M+ P+ V++ L++ C + +++ ++++M++ G P + + + +T
Sbjct: 480 MLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGIT 535
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 134/271 (49%), Gaps = 8/271 (2%)
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDG---FFYNVIKIYGNMA--GRISKAIETLFDMPS 156
A+ +R A ED+ ++ +L DG Y K+ N+ GR S A L
Sbjct: 44 ARLRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEG 103
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
V +N L+ YG + + V DA L++ LC+ G +
Sbjct: 104 SGSPVDVFAYN---TLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVAD 160
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A +LD+ ++ C+PNV TY+ L+ +C+ E+A +L+ M ++G + VT+N++I+
Sbjct: 161 ALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIIN 220
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G+ ++G+V++ LL R+ GC P++ SY +L GL KR+ + +EL M+ + P
Sbjct: 221 GMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMP 280
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ V++ LI C +VE VL++M +
Sbjct: 281 NEVTFDMLIRFFCRGGMVERAIQVLQQMTEH 311
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 140/294 (47%), Gaps = 30/294 (10%)
Query: 89 PNEALYTLIINKLAQAKRF-DAI---EDIMQR----------IKVEKLCRFSDGFFYNVI 134
P+ YT +I L R DA+ +D+++R + +E +C+ S GF
Sbjct: 140 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNS-GF----- 193
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+A+ L +M + C P++ T+N+++N + + + + G
Sbjct: 194 ----------EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGC 243
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ D LLKGLC + + + E ++NC PN T+ L+ C G VE A
Sbjct: 244 QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQ 303
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+L++M +T NI+I+ + KQG+V++ K L M GC P++ SY VL GL
Sbjct: 304 VLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLC 363
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+R+ +AKEL+ M+ P+ V++ I LC + L+E ++++M + G
Sbjct: 364 RAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHG 417
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ +A G +D N L+ G C G+L+AA ++ P P+ TY+ L+ LC
Sbjct: 97 VLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVA---PDAYTYTPLIRVLC 153
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G V +A LL+ M G + VT+ +L+ + K E+ M +L+ M+ KGC PN
Sbjct: 154 DRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIV 213
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ G+ + R +A++L+ R+ P VSY L+ GLC K +DV+ + +M
Sbjct: 214 TYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEM 273
Query: 365 VQQGFVP 371
+++ +P
Sbjct: 274 MEKNCMP 280
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 140/306 (45%), Gaps = 6/306 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I VL Q ++ + N L ++IN + + R D + + C D Y +
Sbjct: 302 IQVLQQMTEH-ECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYG-CN-PDTISYTTV 358
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
A R + A E L +M NC P+ TFN + +L L + + + G
Sbjct: 359 LKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGC 418
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ N L+ G C G++++A + P C+PN TY+TL+ GLC ++ A
Sbjct: 419 TVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAE 475
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L+ M + VTFN+L++ ++G ++E ++L+E+M GC PN +Y + G+
Sbjct: 476 LVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGIT 535
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+A EL+ ++ + +SP +++ +I L + VE+ + G P+
Sbjct: 536 KDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKAL 595
Query: 375 MWREIV 380
++ +I+
Sbjct: 596 VYNKIL 601
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 133/289 (46%), Gaps = 5/289 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R + PNE + I L Q + ++++++ E C YN + + G
Sbjct: 380 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQ-EHGCTVG-VVTYNALVNGFCVQGH 437
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I A+E MP C P+ T+ +L L +A+ + + N+
Sbjct: 438 IDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNV 494
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C+ G L+ A ++++ + C PN+ TY+TL G+ + + E+A LL + S+G
Sbjct: 495 LVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKG 554
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D +TF+ +I L K+ +VEE +++ + G P + Y ++L GL + A
Sbjct: 555 VSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAI 614
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+ + M+ P+ +Y LI GL + L+++ +L + +G V +
Sbjct: 615 DFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSK 663
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P+V + L+ LC +G +A +L E G D +N L++G + G ++ +L
Sbjct: 73 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 132
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+ M P++ +Y ++ L D+ R +A L+ M+ P+ V+Y L+ +C
Sbjct: 133 IGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCK 189
Query: 351 QKLVEDVDWVLKKMVQQGFVPRM--------GMWREIVGCVTFGKDNRNRVY 394
E VL +M +G P + GM RE G V +D NR++
Sbjct: 190 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE--GRVDDARDLLNRLF 239
>gi|413951889|gb|AFW84538.1| hypothetical protein ZEAMMB73_463361, partial [Zea mays]
Length = 423
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 158/327 (48%), Gaps = 9/327 (2%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E++K +L + +S + +L S R + P + L ++ +LA + ++
Sbjct: 59 ELIKSERDLANALSRLELL--VSTRPAFPPPQPLIFHLLRRLATTSPSHLPRLLDLLPRM 116
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKL 178
+ RFS+ V+ + A A+ D+PS C P +++ N +L+ V A+
Sbjct: 117 RRRPRFSESAALVVLSAFSR-ALMPDAALAAFRDLPSLLGCNPGIRSHNALLDAFVRARR 175
Query: 179 YGEIQGIYTS----AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
Y E + S A + + NI+L+ LC G+++ A + ++ P+
Sbjct: 176 YSEADAFFASLSHGACGRRLAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRV 235
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TYSTLM GL + ++ A LL+ M G+ AD V +N L+SG K G E+ +K+ E++
Sbjct: 236 TYSTLMSGLVKHDQLDNALDLLDEMPDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQL 295
Query: 295 -KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+ G PN A+Y+ +L GL RF EA E+ RM+ P V+Y LIHGLC
Sbjct: 296 VRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCRSGD 355
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+ V MV+ G V + ++ ++
Sbjct: 356 VDSAARVYSDMVKAGLVLDVAVYNSLI 382
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 5/266 (1%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
VL FS P + ++ NP + +++ +A+R+ + +
Sbjct: 130 VLSAFSRALMPDAALAAFRDLPSLLGCNPGIRSHNALLDAFVRARRYSEADAFFASLS-H 188
Query: 121 KLC--RFSDGF-FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
C R + YN+I G + +A+ + P T++ +++ LV
Sbjct: 189 GACGRRLAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKHD 248
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTY 236
+ GV+ DA C N LL G + G E A V ++ + PN+ TY
Sbjct: 249 QLDNALDLLDEMPDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATY 308
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
++ GLC+ G +EA + RM + DTVT+ ILI GL + G V+ ++ M
Sbjct: 309 KVMLDGLCKLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCRSGDVDSAARVYSDMVK 368
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEA 322
G + A Y ++ G R EA
Sbjct: 369 AGLVLDVAVYNSLIKGFCKVGRTGEA 394
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 4/228 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I+ L D + ++ + D Y+ + ++ A+
Sbjct: 197 PNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVA--PDRVTYSTLMSGLVKHDQLDNAL 254
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACCLNILLKG 207
+ L +MP Y +N +L+ ++ + ++ + G + ++L G
Sbjct: 255 DLLDEMPDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYKVMLDG 314
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G + A V N +P+ TY L+HGLC G+V+ A + M G+ D
Sbjct: 315 LCKLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLD 374
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+N LI G K G+ E K + G +Y ++ GLLD
Sbjct: 375 VAVYNSLIKGFCKVGRTGEAWKFWDSTGFSGIR-QITTYNVMMKGLLD 421
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 185/366 (50%), Gaps = 17/366 (4%)
Query: 19 LSSASTITRKRTFALA----SPSASHQDSDHHAYKLNH--KDW---LSPTEVLKIFS--- 66
L S + R +T A+A + + S + +Y + K W L P ++ + +
Sbjct: 13 LCSTQSRHRPKTTAVALLHSNSTGSPNNPLPESYTVTPPIKPWPQRLYPKRLVSMITRQQ 72
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
NL + + +Y + +++ N Y II+KL++A+ F +E ++ + ++ +
Sbjct: 73 NLDLALQIFEYAGKY--QPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQI-KCG 129
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+ F NVI+ YG +AG+ A+ T + +N SV++ N +LN V K Y + ++
Sbjct: 130 ENIFINVIRNYG-LAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMF 188
Query: 187 TSA-AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ +K GV + NIL+K LC+ ++E+A VLDE P PNV TY+T++ G
Sbjct: 189 KNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSS 248
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+G++ A + + G D T+ IL++G +QG++ + +KL++ M G PN +
Sbjct: 249 RGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVT 308
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ +K+ EA+ L+ M+ + PS K+I LC +E+ + K+M+
Sbjct: 309 YGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRML 368
Query: 366 QQGFVP 371
++ +P
Sbjct: 369 KKNCMP 374
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 9/233 (3%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA-AKLGVEIDACC 200
GR++ AI+ + DM P+ T+ +++ K GE + + + V A C
Sbjct: 285 GRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALC 344
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA---FGLLE 257
++ LCE G +E A + K+NC P+ STL+H LC++G V EA FG E
Sbjct: 345 CKVI-DVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFE 403
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
R G +T+N LI+G+ ++G++ E KL + M KG PN+ +Y ++ G
Sbjct: 404 R----GAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIG 459
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
E ++ M+ R P+ +Y LI LC + +VD V+ + G V
Sbjct: 460 NAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMAMASGGV 512
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 117/251 (46%), Gaps = 10/251 (3%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIE--DIMQ 115
T +L +S+ D ++ V + R + P+ YT+++N + R DAI+ D M
Sbjct: 240 TTILGGYSSRGDMVNANKVFGELFDR-GWLPDATTYTILMNGYCEQGRLADAIKLMDDMG 298
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
VE + Y V+ + +A L DM PS V+++L
Sbjct: 299 ENGVE-----PNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCE 353
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
A E ++ K D ++ L+ LC+ G + A + EF ++ P++ T
Sbjct: 354 AGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEF-ERGAIPSLLT 412
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y+TL+ G+CEKG + EA L + M +G + T+N+LI G K G +EG+++LE M
Sbjct: 413 YNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEML 472
Query: 296 GKGCYPNSASY 306
C PN ++Y
Sbjct: 473 DNRCMPNKSTY 483
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 108/268 (40%), Gaps = 36/268 (13%)
Query: 49 KLNHKDWLSPTEVLKIFSN-------LRDPISVISVLNQYSKRKDYNPNEALYTLIINKL 101
+L + WL I N L D I ++ + + PNE Y +++
Sbjct: 261 ELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGE----NGVEPNEVTYGVMVEAY 316
Query: 102 AQAKRF----DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY 157
+ K+ + ++D+++R V S VI + AG+I +A E M
Sbjct: 317 CKEKKAGEARNLLDDMLERQYVP-----SSALCCKVIDVLCE-AGKIEEACELWKRMLKK 370
Query: 158 NCWPSVKTFNLVLNLLV-------SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
NC P + +++ L + KL+GE + G N L+ G+CE
Sbjct: 371 NCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFE--------RGAIPSLLTYNTLIAGMCE 422
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G L A + D+ ++ +PN TY+ L+ G + GN +E +LE M + T
Sbjct: 423 KGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKST 482
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKG 298
+ ILI L K G E K++ G
Sbjct: 483 YAILIEELCKMGMEGEVDKVVSMAMASG 510
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 157/327 (48%), Gaps = 3/327 (0%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ +L+ + + VL++ +R+ Y P+ YT++I + +
Sbjct: 211 DVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECY-PDVITYTILIEATCKESGVGQAMKL 269
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ ++ +K C+ D YNV+ GR+ +AI L MPSY C P+V T N++L +
Sbjct: 270 LDEMR-DKGCK-PDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSM 327
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
S + + + + G NIL+ LC G + A VL++ P+ C PN
Sbjct: 328 CSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNS 387
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+Y+ L+H LC+ +E A L+ M S G D VT+N L++ L K GKV+ +++L +
Sbjct: 388 LSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 447
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+ KGC P +Y V+ GL + +A +L+ M + + P ++Y L+ GL +
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGK 507
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
V++ + + G P + I+
Sbjct: 508 VDEAIAFFHDLEEMGVKPNAITYNSIM 534
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 134/292 (45%), Gaps = 5/292 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++I+ + + ++ R+ V D YN I +G++ +A+
Sbjct: 178 PDVITYNVLISGYCKTGEIGSALQLLDRMSVS-----PDVVTYNTILRTLCDSGKLKEAM 232
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L C+P V T+ +++ G+ + G + D N+L+ G+
Sbjct: 233 EVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGI 292
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G L+ A L+ P C+PNV T++ ++ +C G +A L M +G
Sbjct: 293 CKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSV 352
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VTFNILI+ L ++G + + +LE+M GC PNS SY +L+ L K+ A E +
Sbjct: 353 VTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDI 412
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ P V+Y L+ LC V+ +L ++ +G P + + ++
Sbjct: 413 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVI 464
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 140/284 (49%), Gaps = 2/284 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + +I+ + R+ E + + + K C S F N++ + G I +AI
Sbjct: 315 PNVITHNIILRSMCSTGRWMDAEKFLAEM-IRKGCSPSVVTF-NILINFLCRKGLIGRAI 372
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L MP + C P+ ++N +L+ L K G D N LL L
Sbjct: 373 DVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTAL 432
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++G ++ A +L++ + C P + TY+T++ GL + G ++A LL+ M+ +G+ D
Sbjct: 433 CKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDI 492
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ L+ GL ++GKV+E + ++ G PN+ +Y ++ GL ++ A + +
Sbjct: 493 ITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAY 552
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
M+ P+ SY LI GL + L ++ +L ++ +G V +
Sbjct: 553 MVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKK 596
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 143/302 (47%), Gaps = 2/302 (0%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
Q R +P+ Y I+ L + + +++ R ++++ C + D Y ++
Sbjct: 201 QLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDR-QMQREC-YPDVITYTILIEATC 258
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ +A++ L +M C P V T+N+++N + E G + +
Sbjct: 259 KESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVI 318
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NI+L+ +C G A L E ++ C P+V T++ L++ LC KG + A +LE+M
Sbjct: 319 THNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKM 378
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G +++++N L+ L K K+E ++ L+ M +GCYP+ +Y +L L +
Sbjct: 379 PQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 438
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A E++ ++ + SP ++Y +I GL +D +L +M +G P + + +
Sbjct: 439 DVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTL 498
Query: 380 VG 381
VG
Sbjct: 499 VG 500
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 32/211 (15%)
Query: 193 GVEIDACCLNILLKG--------------------------------LCENGNLEAAFYV 220
G D N+L+ G LC++G L+ A V
Sbjct: 175 GAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEV 234
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
LD ++ C P+V TY+ L+ C++ V +A LL+ M +G D VT+N+LI+G+ K
Sbjct: 235 LDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICK 294
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G+++E ++ L M GC PN ++ +L + R+ +A++ + MI + SPS V+
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVT 354
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ LI+ LC + L+ VL+KM Q G P
Sbjct: 355 FNILINFLCRKGLIGRAIDVLEKMPQHGCTP 385
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 5/179 (2%)
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+I AC L++GLC+ G A V++ P+V TY+ L+ G C+ G + A
Sbjct: 144 DIIAC--TSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQ 201
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL+RM + D VT+N ++ L GK++E M++L+R + CYP+ +Y ++
Sbjct: 202 LLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATC 258
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ +A +L+ M + P V+Y LI+G+C + +++ L M G P +
Sbjct: 259 KESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNV 317
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L+ L NG LE F L++ + P++ ++L+ GLC+ G +A ++E +E G
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+N+LISG K G++ ++LL+RM P+ +Y +L L D + EA E
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAME 233
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ R + P ++Y LI C + V +L +M +G P
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKP 280
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 123/241 (51%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F YN++ A + KA E L +M P TFN +++ L A + +
Sbjct: 9 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 68
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
A+ C N L+ GLC+ N++ A ++DEF P+V TYS L GLC++
Sbjct: 69 AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKR 128
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G ++EAF L++ M G + VT+N LI GL K K E+ +LLE + G P+ +Y
Sbjct: 129 GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTY 188
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL + R +A ++V M+ +PS ++Y L+ GLC V++ + K+MV
Sbjct: 189 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248
Query: 367 Q 367
+
Sbjct: 249 K 249
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 136/273 (49%), Gaps = 2/273 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++I+ L +A + D +++ + + D +N I AG+ +A
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGV--TPDTVTFNSIMDGLCKAGKFERAH 65
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M NC PS T+N +++ L + + + G D +IL GL
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G ++ AF ++ E C PN+ TY+TL+ GLC+ E+A+ LLE + S G D
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ I++ GL K+G++++ +K++E M +GC P+ +Y ++ GL R EA +
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 245
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
M+ + + ++Y L++G C ++ V+
Sbjct: 246 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV 278
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 115/211 (54%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+N++++ L A + + GV D N ++ GLC+ G E A +
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L ++NC P+ TY+TL+ GLC++ NV+ A L++ S G D VT++IL GL K
Sbjct: 68 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G+++E +L++ M G GC PN +Y ++ GL + +A EL+ ++ P V+
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y ++ GLC + ++ +++ M+++G P
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTP 218
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 15/289 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK---IYGNMA--G 142
PN Y +I+ L +A + + ++++ + S GF +V+ I + G
Sbjct: 147 TPNLVTYNTLIDGLCKASKTEKAYELLETL-------VSSGFVPDVVTYTIIVDGLCKEG 199
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ KA++ + M C PSV T+ ++ L E I+ DA
Sbjct: 200 RLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYV 259
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C++ + A V+D P + Y+ LM G C++G ++E + E M
Sbjct: 260 SLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACR 316
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + T+NI++ GL K GKV+E LE M GC P+ SY ++ GL + EA
Sbjct: 317 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEA 376
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++++ +MI + P V+Y L+ C ++ +D +LK M++ G P
Sbjct: 377 RQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDP 425
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 147/337 (43%), Gaps = 50/337 (14%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
S+++V+ + + R P+ Y +I+ L + + D + ++ S GF +
Sbjct: 66 SLLAVMAERNCR----PSCCTYNTLISGLCKQQNVDRAKTLVDEF-------VSSGFVPD 114
Query: 133 VIKIYGNMA------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
V+ Y +A GRI +A E + +M C P++ T+N +++ L A + +
Sbjct: 115 VVT-YSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELL 173
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G D I++ GLC+ G L+ A +++ K+ C P+V TY+ LM GLC
Sbjct: 174 ETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRT 233
Query: 247 GNVEEAFGLLERMESEGIDADTVT--------------------------------FNIL 274
G V+EA + + M S+ AD + +N L
Sbjct: 234 GRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNAL 293
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
+ G K+G+++E + E M +GC PN +Y V+ GL + EA + M
Sbjct: 294 MDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGC 353
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P VSY +I GL ++ VL +M+Q G P
Sbjct: 354 VPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPP 390
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 88/179 (49%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ GLC+ + A +L E + P+ T++++M GLC+ G E A LL M
Sbjct: 14 NILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE 73
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
T+N LISGL KQ V+ L++ G P+ +Y + GL + R E
Sbjct: 74 RNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDE 133
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ELV M +P+ V+Y LI GLC E +L+ +V GFVP + + IV
Sbjct: 134 AFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIV 192
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 6/281 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD + Y ++N ++ R + ++ I+ + D YN + GR+
Sbjct: 249 KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTP---YID--VYNALMDGYCKEGRL 303
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ DM C P++KT+N+V++ L E S G D NI+
Sbjct: 304 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 363
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GL + + A VLD+ + P+ TY+TLM C++ ++A G+L+ M G+
Sbjct: 364 IDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 423
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS-ASYQEVLYGLLDKKRFPEAK 323
D D VT+N LISGL + ++ + +L+ M GC ++ +Y ++ L + +A
Sbjct: 424 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQAL 483
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
L+ M + + V+Y I LC + +++ +L +M
Sbjct: 484 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 524
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P+V TY+ L+ GLC+ ++A +L M G+ DTVTFN ++ GL K GK E L
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L M + C P+ +Y ++ GL ++ AK LV + P V+Y L GLC
Sbjct: 68 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ +++ ++K+M G P + + ++
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLI 157
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 128/278 (46%), Gaps = 7/278 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ + + +RFD I++ + K D YN + + R+ A
Sbjct: 390 PDAVTYNTLMAQFCKEERFDDAVGILKNMI--KAGVDPDNVTYNTLISGLSQTNRLGDAY 447
Query: 149 ETLFDMPSYNCWPSV-KTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E + +M C S T+N +++ L + + GVE + NI +
Sbjct: 448 ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDR 507
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES-EGIDA 266
LC+ G L+ A +L E E +Y+T++ GLC+ ++ A L M + +G+
Sbjct: 508 LCKEGRLDEASSLLSEMDTLRDEV---SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCI 564
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ TFN+LI K +++E + LLE M +GC P+ +Y V+ L + +A EL
Sbjct: 565 TSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELF 624
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
M + S VSY LI+GLC Q ++ VL++M
Sbjct: 625 DEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 136/319 (42%), Gaps = 42/319 (13%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++++ L + + D ++ + D YN+I A + +A
Sbjct: 320 PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGC--VPDVVSYNIIIDGLFKASKPKEAR 377
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L M P T+N ++ + + + GI + K GV+ D N L+ GL
Sbjct: 378 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 437
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNV-RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ L A+ ++ E + C + TY+T++ LC++G +++A L++ M G++A+
Sbjct: 438 SQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEAN 497
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL-----LDK------ 316
TVT+NI I L K+G+++E LL M + SY V+ GL LD+
Sbjct: 498 TVTYNIFIDRLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAR 554
Query: 317 -------------------------KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
KR EA L+ M+ SPS ++Y +I LC
Sbjct: 555 EMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKL 614
Query: 352 KLVEDVDWVLKKMVQQGFV 370
V+ + +M +G V
Sbjct: 615 DKVDKAWELFDEMAVRGIV 633
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 34/275 (12%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y +I+ L+Q R ++M + + C S YN I G + +A
Sbjct: 424 DPDNVTYNTLISGLSQTNRLGDAYELMHEM-LRNGCVVSACTTYNTIIDRLCKEGCLKQA 482
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLV-------SAKLYGEIQGI-----YTS------- 188
+ + M + + T+N+ ++ L ++ L E+ + YT+
Sbjct: 483 LLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCK 542
Query: 189 ------AAKLG---VEIDACCL-----NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
A+KL V + C+ N+L+ + L+ A +L+ ++ C P+V
Sbjct: 543 AEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVI 602
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TY+ ++ LC+ V++A+ L + M GI A +V++ +LI GL QG+ +E +++LE M
Sbjct: 603 TYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
C + +++ L + R EA EL+ RM
Sbjct: 663 ASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M + D T+NILI GL K K ++ ++L M +G P++ ++ ++ GL +
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
F A L+ M PS +Y LI GLC Q+ V+ ++ + V GFVP
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVP 113
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N Y + I++L + R D ++ + D Y + I A ++ +A +
Sbjct: 497 NTVTYNIFIDRLCKEGRLDEASSLLSEMDT-----LRDEVSYTTVIIGLCKAEQLDRASK 551
Query: 150 TLFDMPSYN--CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M + C S TFNL+++ K E + + G N+++
Sbjct: 552 LAREMVAVKGLCITS-HTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITC 610
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ ++ A+ + DE + + +Y+ L++GLC +G +EA +LE M S + D
Sbjct: 611 LCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 670
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGK 297
+ L LR QG+ EE +LL RM K
Sbjct: 671 DLKCRKLYLALRGQGRGEEAAELLRRMTTK 700
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 163/328 (49%), Gaps = 7/328 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L+ T V K+ +R+ + + + + ++ YN + ++ L + KR +D +Q
Sbjct: 809 LTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKR---PKDALQ 865
Query: 116 RIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ KLC + F + ++ I+G AG I A E L +MP + +V N+V+ L
Sbjct: 866 VYR-NKLCCSPNMFTFTIL-IHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLC 923
Query: 175 SAKLYGEIQGIYTSAAKLG-VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
SA+ ++ + G D + ++ L ++G ++ A ++++ + C PNV
Sbjct: 924 SARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNV 983
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TYS+L+HGLC+ G ++EA LL+RM G + VT+N +I G K G+++E LLE
Sbjct: 984 VTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEE 1043
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M GC PN +Y +L + +A LV M+ + P+ +Y L+ C +
Sbjct: 1044 MVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDE 1103
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVG 381
VE +L M+Q+G VP + + ++
Sbjct: 1104 VERACQLLSSMIQKGCVPNVVSYNTVIA 1131
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 144/292 (49%), Gaps = 3/292 (1%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N L+ ++I L A++ D+ ++ + ++ C D F Y+ I +G++ A
Sbjct: 911 NVILHNVVIKGLCSARKLDSALELFKEMEESGSCP-PDVFTYSTIVDSLVKSGKVDDACR 969
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+ DM S C P+V T++ +L+ L A E + + G + N ++ G C
Sbjct: 970 LVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHC 1029
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G ++ A+++L+E C+PNV TY+ L+ C+ G E+A GL+E M +G +
Sbjct: 1030 KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF 1089
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+N L+ K+ +VE +LL M KGC PN SY V+ GL + E L+ +M
Sbjct: 1090 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 1149
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ-GFVPRMGMWREIV 380
+ P V++ +I +C V D+ + L ++Q+ G P + + +V
Sbjct: 1150 LSNNCVPDIVTFNTIIDAMCKTYRV-DIAYELFNLIQESGCTPNLVTYNSLV 1200
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 140/283 (49%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ II+ +A + D+++++ + + CR +I A I A
Sbjct: 403 PDAINYSTIISGFCKAGKLREAHDLLEQM-IRRGCRPDVACLSTLIDALCKAAA-IDSAQ 460
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +C P V ++++++ L AK E + K D N ++ GL
Sbjct: 461 ELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGL 520
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++ + AF + D P+V TYS ++H C+ N++ AF +LERM+ D
Sbjct: 521 CKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDV 580
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ LI+GL K G V++ + + M G GC PN +Y ++ GL + +A E++
Sbjct: 581 VTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEI 640
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + +P ++Y LI+GLCN +E+ VL++M +G +P
Sbjct: 641 MRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLP 683
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 149/281 (53%), Gaps = 2/281 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ P+ A + +I+ L +A D+ ++++ R+ + C D Y+++ A R
Sbjct: 433 RRGCRPDVACLSTLIDALCKAAAIDSAQELL-RMSIGMDCA-PDVVAYSILIHALCKAKR 490
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A L M C+P V T+N V++ L ++ + ++ GV D +I
Sbjct: 491 LPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSI 550
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C++ NL++AF +L+ + C P+V TYS L++GLC+ G V++AF + + M G
Sbjct: 551 VIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCG 610
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+N LI GL K KVE+ ++LE M+ + C P+S +Y ++ GL + R EA
Sbjct: 611 CAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAW 670
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ M + P ++Y L+ L +E V+ +LK+M
Sbjct: 671 RVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 139/288 (48%), Gaps = 3/288 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +PN Y+ +++ L +A + D ++QR+ C + YN I GRI
Sbjct: 977 KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM-TRSGCS-PNIVTYNTIIDGHCKLGRI 1034
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A L +M C P+V T+ ++L+ + G+ + G + N L
Sbjct: 1035 DEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSL 1094
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L C+ +E A +L ++ C PNV +Y+T++ GLC+ V E LLE+M S
Sbjct: 1095 LDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNC 1154
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VTFN +I + K +V+ +L ++ GC PN +Y +++GL +RF +A+
Sbjct: 1155 VPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEY 1214
Query: 325 LVGRMICER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ M ++ SP ++Y +I GLC K V+ + +M+ G P
Sbjct: 1215 LLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 1262
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 138/305 (45%), Gaps = 2/305 (0%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+VL+ K P+ Y +IN L+++ R D +++ + + F YN +
Sbjct: 215 AVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA--PNVFSYNTVL 272
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
A R+ A+ L M + C P V ++ V+N L E + + G +
Sbjct: 273 HGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQ 332
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+ L+ G C G+L+ A ++ + ++ PN TY+ +MH C + ++E A +
Sbjct: 333 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQV 392
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
L+ M G D + ++ +ISG K GK+ E LLE+M +GC P+ A ++ L
Sbjct: 393 LQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCK 452
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
A+EL+ I +P V+Y LIH LC K + + + L MV+ P +
Sbjct: 453 AAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVT 512
Query: 376 WREIV 380
+ +V
Sbjct: 513 YNSVV 517
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 156/350 (44%), Gaps = 46/350 (13%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--VEKLCRFSD 127
D I ++ V+ + K Y PN Y +++ + D +E Q + ++K C +
Sbjct: 1071 DAIGLVEVMVE----KGYVPNLFTYNSLLDMFCKK---DEVERACQLLSSMIQKGC-VPN 1122
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
YN + A ++ + + L M S NC P + TFN +++ + ++
Sbjct: 1123 VVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN 1182
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP-KQNCEPNVRTYSTLMHGLCEK 246
+ G + N L+ GLC++ + A Y+L E KQ C P++ TY+T++ GLC+
Sbjct: 1183 LIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKS 1242
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILIS------------------------------ 276
V+ A+ L +M S+G+ D VT++I+IS
Sbjct: 1243 KRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITY 1302
Query: 277 -----GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
G K G +++ +++L+ + KG YP+ ++ + L + R +A EL+ M+
Sbjct: 1303 GTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLR 1362
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ P V+Y L+ G C+ L ED + + M Q G P + +VG
Sbjct: 1363 AGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVG 1412
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 1/214 (0%)
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
N +LN+LV A Y + ++ S + D + L+ G G + A+ + DE +
Sbjct: 130 NCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNR 189
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+ + + + +++ GLC+ G +A L R S+ D+VT+N +I+GL K ++++
Sbjct: 190 KGLKAHAGVHKSILRGLCDAGQCSDAV-LHFREMSKTCPPDSVTYNTMINGLSKSDRLDD 248
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
++LLE M G PN SY VL+G R A L+ +M+ P VSY +I+
Sbjct: 249 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVIN 308
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
GLC V++ V+ KM+Q+G P + + +V
Sbjct: 309 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLV 342
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 145/327 (44%), Gaps = 3/327 (0%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D +S T V+ L V+++ +R PN Y +++ + D ++
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRG-CQPNVITYGTLVDGFCRVGDLDGAVEL 357
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
++++ E+ R + + N++ ++ + +A + L M C P ++ +++
Sbjct: 358 VRKM-TERGYRPNAITYNNIMHVFCR-RNDMERAHQVLQMMIQTGCPPDAINYSTIISGF 415
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
A E + + G D CL+ L+ LC+ +++A +L +C P+V
Sbjct: 416 CKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDV 475
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
YS L+H LC+ + EA L+ M D VT+N ++ GL K ++ + L +R
Sbjct: 476 VAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDR 535
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M+ G P+ +Y V++ A +++ RM + P V+Y LI+GLC
Sbjct: 536 MRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGT 595
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+ V ++M+ G P + + ++
Sbjct: 596 VDKAFDVFQEMLGCGCAPNLVTYNTLI 622
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
K C PN+ T++ L+HGLC G++ A+ LL+ M G+ + + N++I GL K++
Sbjct: 870 KLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLD 929
Query: 286 EGMKLLERMKGKG-CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
++L + M+ G C P+ +Y ++ L+ + +A LV M+ + SP+ V+Y L
Sbjct: 930 SALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSL 989
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETVD 400
+HGLC +++ +L++M + G P + + I+ G G+ + + E VD
Sbjct: 990 LHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD 1046
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 20/291 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + II+ + + R D ++ I+ G N++ Y ++ + K+
Sbjct: 1156 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQ-------ESGCTPNLVT-YNSLVHGLCKSR 1207
Query: 149 ETLFDMPSY---------NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
FD Y C P + T+N V++ L +K ++ G+ D
Sbjct: 1208 R--FDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 1265
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+I++ LC+ ++ A VL+ K +P TY TL+ G C+ GN+++A +L+ +
Sbjct: 1266 TYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLL 1325
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S+G D VTF+I I L K+G++ + +LLE M G P++ +Y +L G D
Sbjct: 1326 LSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLT 1385
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED-VDWVLKKMVQQGF 369
+A +L M P +Y L+ L ++K +D + V K MV GF
Sbjct: 1386 EDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGF 1436
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 112/244 (45%), Gaps = 33/244 (13%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIE---DIMQRIK-----------VEKLC---RFSDG 128
D P+ Y+++I+ L +AKR E D+M + + V+ LC R +D
Sbjct: 470 DCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDA 529
Query: 129 FF-YNVIKIYGNMAGRIS---------------KAIETLFDMPSYNCWPSVKTFNLVLNL 172
F ++ ++ G M ++ A + L M C P V T++ ++N
Sbjct: 530 FLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALING 589
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
L A + ++ G + N L+ GLC+ +E A +L+ KQ+C P+
Sbjct: 590 LCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPD 649
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TY+ L++GLC +EEA+ +L M+ +G D +T+ L+ L+K +E +LL+
Sbjct: 650 SITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLK 709
Query: 293 RMKG 296
M+
Sbjct: 710 EMEA 713
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 152/308 (49%), Gaps = 6/308 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+LN+ S + P+ YT ++ L A+R+D ++ + + V+K C ++ F +++
Sbjct: 233 ILNRLSS-YGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEM-VDKKCVPNEVTFDMLVRF 290
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ G + +AI+ L M + C P+ N+V+N + + + G
Sbjct: 291 FCR-GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNP 349
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D +L+GLC G E A +L E ++NC PN T++T + LC+KG +E+A L+
Sbjct: 350 DTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLI 409
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E M G VT+N L+ G QG+V+ ++L + C PN+ +Y +L GL
Sbjct: 410 ELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHA 466
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+R A EL+ MI + + V++ L+ C + VE+ ++ +M++ G P + +
Sbjct: 467 ERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITF 526
Query: 377 REIVGCVT 384
++ +T
Sbjct: 527 NTLLDGIT 534
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 145/306 (47%), Gaps = 6/306 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I VL Q S+ PN L ++IN + + R D D + + + C D Y +
Sbjct: 301 IQVLQQMSQHG-CTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG-CN-PDTISYTTV 357
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
AGR A E L +M NC P+ TFN + +L L + + + G
Sbjct: 358 LRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGC 417
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ N L+ G C G +++A + + P CEPN TY+TL+ GLC ++ A
Sbjct: 418 SVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAE 474
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL M + + VTFN+L+S ++G VEE M+L+ +M GC PN ++ +L G+
Sbjct: 475 LLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGIT 534
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
EA EL+ ++ + +S ++Y ++ L + E+ +L + G P++G
Sbjct: 535 KDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVG 594
Query: 375 MWREIV 380
M+ +I+
Sbjct: 595 MYNKIL 600
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 127/255 (49%), Gaps = 5/255 (1%)
Query: 131 YNVIKIYGNMA--GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
Y K+ N+ GR S A L + V +N L+ YG +
Sbjct: 75 YLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYN---TLVAGYCRYGRLDAARRL 131
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
A + V DA +++GLC+ G + A +LD+ ++ C+P+V TY+ L+ +C+
Sbjct: 132 IASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSG 191
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
EA +L+ M ++G + VT+N++I+G+ ++G+V++ ++L R+ G P+ SY
Sbjct: 192 FGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTT 251
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
VL GL +R+ + K L M+ ++ P+ V++ L+ C +VE VL++M Q G
Sbjct: 252 VLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG 311
Query: 369 FVPRMGMWREIVGCV 383
P + ++ +
Sbjct: 312 CTPNTTLCNIVINAI 326
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 30/294 (10%)
Query: 89 PNEALYTLIINKLAQAKRF-DAI---EDIMQR----------IKVEKLCRFSDGFFYNVI 134
P+ YT II L R DA+ +D++QR + +E +C+ S GF
Sbjct: 139 PDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCK-SSGF----- 192
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+A+ L +M + C P++ T+N+++N + + + I + G
Sbjct: 193 ----------GEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGF 242
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ D +LKGLC + + E + C PN T+ L+ C G VE A
Sbjct: 243 QPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQ 302
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+L++M G +T NI+I+ + KQG+V++ L M GC P++ SY VL GL
Sbjct: 303 VLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLC 362
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
R+ AKEL+ M+ + P+ V++ I LC + L+E +++ M + G
Sbjct: 363 RAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG 416
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 143/290 (49%), Gaps = 7/290 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-YNVIKIYGNMAG 142
RK+ PNE + I L Q IE ++ I++ S G YN + + G
Sbjct: 379 RKNCPPNEVTFNTFICILCQKG---LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQG 435
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A+E ++P C P+ T+ +L L A+ + + ++A N
Sbjct: 436 RVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFN 492
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+L+ C+ G +E A ++++ + C PN+ T++TL+ G+ + N EEA LL + S+
Sbjct: 493 VLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSK 552
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ DT+T++ ++ L ++ + EE +++L ++ G P Y ++L+ L + +A
Sbjct: 553 GVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQA 612
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+ M+ P+ +Y LI GL ++ L+++ +VL ++ +G + +
Sbjct: 613 IDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSK 662
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 130/272 (47%), Gaps = 2/272 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ P+ YT+++ + ++ F +++ ++ K C + YNVI GR
Sbjct: 169 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRA-KGCT-PNIVTYNVIINGMCREGR 226
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A E L + SY P + ++ VL L +A+ + +++ ++ + ++
Sbjct: 227 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 286
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++ C G +E A VL + + C PN + +++ +C++G V++A+ L M G
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 346
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ DT+++ ++ GL + G+ E +LL M K C PN ++ + L K +A
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 406
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+L+ M S V+Y L+HG C Q V+
Sbjct: 407 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVD 438
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 138/338 (40%), Gaps = 40/338 (11%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
RD ++ + L + S + P+ L T +I L + R +++ E D
Sbjct: 52 RDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLR--TAEASGAPVDV 109
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F YN + GR+ A + MP P T+ ++ L G+ +
Sbjct: 110 FAYNTLVAGYCRYGRLDAARRLIASMPV---PPDAYTYTPIIRGLCDRGRVGDALALLDD 166
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ G + +LL+ +C++ A VLDE + C PN+ TY+ +++G+C +G
Sbjct: 167 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 226
Query: 249 VEEAFGLLERMESEGIDADT-----------------------------------VTFNI 273
V++A +L R+ S G D VTF++
Sbjct: 227 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 286
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ + G VE +++L++M GC PN+ V+ + + R +A + + M
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 346
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+P +SY ++ GLC E +L +MV++ P
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPP 384
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 142/288 (49%), Gaps = 5/288 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + P+ +T II +A A D D ++ + C + + +I + A
Sbjct: 17 KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG----CDPNVVTYTALIAAFAR-AK 71
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A++ L +M C P++ T+N++++ L + G Q + + G + N
Sbjct: 72 KLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFN 131
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ GN++ A +L + PNV TYS L+ GLC+ EA +LE M++
Sbjct: 132 SLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKAS 191
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D T++ LI GL K K+EE ++L RM G GC P+ Y +++ + EA
Sbjct: 192 GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEA 251
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
++ + M +R SP V+Y +I GLC + + +L +M + G V
Sbjct: 252 QKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 151/285 (52%), Gaps = 5/285 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K P+ Y+ +I+ L +A + + E +++R+ C + ++I + +G
Sbjct: 189 KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG-CTPDVVVYSSIIHAFCK-SG 246
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-VEIDACCL 201
++ +A +TL +M P V T+N V++ L E Q I + G V D
Sbjct: 247 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTY 306
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ GLC++ L A +LD K C P+V TY+T++ GLC+ G +EEA LL+ M+
Sbjct: 307 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 366
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + VT+ LISGL K KV+E +++E M+ GC PN +Y ++ GL R E
Sbjct: 367 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKE 426
Query: 322 AKELVGRMICERM--SPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A++LV RM R SP +Y+ +++ L + LV++ + +L++M
Sbjct: 427 AQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 121/240 (50%), Gaps = 3/240 (1%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + A+E L +M S P T ++ + +A G++ G +G + +
Sbjct: 3 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANA---GDLDGAMDHLRSMGCDPNVVT 59
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ LE A +L+E ++ C PN+ TY+ L+ LC+ V A ++++M
Sbjct: 60 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G + +TFN L+ G K+G V++ KLL M KG PN +Y ++ GL ++F
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EAKE++ M ++P +Y LIHGLC +E+ + +L++M G P + ++ I+
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 148/304 (48%), Gaps = 42/304 (13%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K PN Y+ +I+ L ++++F +++++ +K + D F Y+ + I+G A +
Sbjct: 156 KGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGV--TPDAFTYSAL-IHGLCKADK 212
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I +A + L M C P V +Y+S
Sbjct: 213 IEEAEQMLRRMAGSGCTPDVV--------------------VYSS--------------- 237
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C++G L A L E KQ P+V TY+T++ GLC+ G + EA +L++M+ G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 264 -IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ D VT++ +I+GL K + E KLL+RM GC P+ +Y ++ GL R EA
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG- 381
+ L+ M +P+ V+Y LI GLC + V++ + V+++M G P + + +V
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417
Query: 382 -CVT 384
CV+
Sbjct: 418 LCVS 421
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 135/276 (48%), Gaps = 4/276 (1%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F + I AG + A++ L M C P+V T+ ++ AK E +
Sbjct: 24 DAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLL 80
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G + N+L+ LC+ + AA V+ + + PNV T+++L+ G C++
Sbjct: 81 EEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKR 140
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
GNV++A LL M ++G+ + VT++ LI GL K K E ++LE MK G P++ +Y
Sbjct: 141 GNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTY 200
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+++GL + EA++++ RM +P V Y +IH C + + L++M +
Sbjct: 201 SALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRK 260
Query: 367 QGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETVDS 401
Q P + + ++ G GK +V + + +S
Sbjct: 261 QRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 91/172 (52%), Gaps = 3/172 (1%)
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G+L AA +L+E P+ T++ ++ + G+++ G ++ + S G D +
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPNV 57
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ LI+ + K+EE MKLLE M+ +GC PN +Y ++ L A+++V +
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI +P+ +++ L+ G C + V+D +L MV +G P + + ++
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALI 169
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 141/303 (46%), Gaps = 6/303 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++I+ ++ D ++ R+ V D YN I +G++ +A+
Sbjct: 182 PDVITYNVLISGYCKSGEIDNALQVLDRMNVA-----PDVVTYNTILRTLCDSGKLKQAM 236
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L C+P V T+ +++ G+ + G + D N+L+ G+
Sbjct: 237 EVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 296
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G L+ A L+ P C+PNV T++ ++ +C G +A LL M +G
Sbjct: 297 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 356
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VTFNILI+ L +QG + + +LE+M GC PNS SY +L+G +K+ A E +
Sbjct: 357 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 416
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
M+ P V+Y L+ LC V+ +L ++ +G P + + ++ G GK
Sbjct: 417 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 476
Query: 388 DNR 390
R
Sbjct: 477 TER 479
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 143/284 (50%), Gaps = 2/284 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + +I+ + R+ E ++ + + K C S F N++ + G + +AI
Sbjct: 319 PNVITHNIILRSMCSTGRWMDAEKLLSDM-LRKGCSPSVVTF-NILINFLCRQGLLGRAI 376
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L MP + C P+ ++N +L+ K G D N LL L
Sbjct: 377 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 436
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++G ++ A +L++ + C P + TY+T++ GL + G E A LL+ M +G+ D
Sbjct: 437 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 496
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ L+SGL ++GKV+E +K ++G G PN+ +Y ++ GL ++ A + +
Sbjct: 497 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 556
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
MI +R P+ +Y LI G+ + L ++ +L ++ +G V +
Sbjct: 557 MISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 600
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 127/254 (50%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YNV+ GR+ +AI+ L +MPSY C P+V T N++L + S + + + +
Sbjct: 285 DVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 344
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ + G NIL+ LC G L A +L++ P C PN +Y+ L+HG C++
Sbjct: 345 SDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKE 404
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
++ A L+ M S G D VT+N L++ L K GKV+ +++L ++ KGC P +Y
Sbjct: 405 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 464
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
V+ GL + A +L+ M + + P ++Y L+ GL + V++ +
Sbjct: 465 NTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 524
Query: 367 QGFVPRMGMWREIV 380
G P + I+
Sbjct: 525 LGIRPNAITYNSIM 538
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 145/301 (48%), Gaps = 2/301 (0%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
Q R + P+ Y I+ L + + +++ R +++K C + D Y ++
Sbjct: 205 QVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR-QLQKEC-YPDVITYTILIEATC 262
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ +A++ L +M + P V T+N+++N + E + G + +
Sbjct: 263 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 322
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NI+L+ +C G A +L + ++ C P+V T++ L++ LC +G + A +LE+M
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 382
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G +++++N L+ G K+ K++ ++ L+ M +GCYP+ +Y +L L +
Sbjct: 383 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 442
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A E++ ++ + SP ++Y +I GL E +L +M ++G P + + +
Sbjct: 443 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 502
Query: 380 V 380
V
Sbjct: 503 V 503
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L+ L NG LE F L+ + P++ ++L+ G C G ++A ++E +E G
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+N+LISG K G+++ +++L+RM P+ +Y +L L D + +A E
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ R + + P ++Y LI C + V +L +M +G P
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKP 284
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 8/222 (3%)
Query: 89 PNEALYTLIINKLAQAKRFD-AIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PN Y +++ + K+ D AIE DIM V + C + D YN + G++
Sbjct: 389 PNSLSYNPLLHGFCKEKKMDRAIEYLDIM----VSRGC-YPDIVTYNTLLTALCKDGKVD 443
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A+E L + S C P + T+N V++ L + + G++ D + L+
Sbjct: 444 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 503
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GL G ++ A + PN TY+++M GLC+ + A L M S+
Sbjct: 504 SGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCK 563
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
T+ ILI G+ +G +E + LL + +G S++ Q
Sbjct: 564 PTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQ 605
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 163/355 (45%), Gaps = 12/355 (3%)
Query: 39 SHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLII 98
H+ + Y ++ +D L L DP + + +LN R+D+ P+ A+Y I+
Sbjct: 42 GHRPAPLRVYAISDQDRL-----LAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIV 96
Query: 99 NKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF---DMP 155
KL A FD +E +++ ++ E + + ++ Y + R A++ + D
Sbjct: 97 QKLGTAGAFDLMEGLVREMRREG-HQVRAVVVRSFVESYARLR-RFDDAVDLVLNQLDND 154
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
++ FN +LN+LV ++ +Y G++ D LN L+K LC +
Sbjct: 155 TFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVR 214
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A +L+E P+ T++TLM G E+G++E A + +M G VT N+LI
Sbjct: 215 TAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLI 274
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+G K G+VE+ + +++ G P+ +Y ++GL A +++ M+ E
Sbjct: 275 NGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHD 334
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
P +Y +I+ L +++ ++ +MV +G +P + ++ V NR
Sbjct: 335 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI--VALSSQNR 387
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 12/289 (4%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-----FYNVIKIYGNMAG 142
+P ++IN + R +ED + I+ E +DGF YN G
Sbjct: 264 SPTGVTVNVLINGYCKMGR---VEDALGYIQQE----IADGFEPDQVTYNTFVHGLCQNG 316
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+S A++ + M P V T+N V+N L E +GI G D N
Sbjct: 317 HVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFN 376
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ L LE A + E + P+V T++ L++ LC+ G+ L E M+S
Sbjct: 377 TLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSS 436
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D VT+NILI L GK+ + LL M+ GC ++ +Y ++ L K R EA
Sbjct: 437 GCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEA 496
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+E+ +M + +S S V++ LI GLC K ++D ++++MV++G P
Sbjct: 497 EEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQP 545
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 134/266 (50%), Gaps = 4/266 (1%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN++ + G++ A++ L +M S C S T+N +++ L E + ++
Sbjct: 441 DEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVF 500
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
G+ A N L+ GLC+ ++ A ++++ K+ +PN TY++++ C++
Sbjct: 501 DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQ 560
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
GN+++A +LE M + G + D VT+ LI+GL K G+ + +KLL M+ KG P +Y
Sbjct: 561 GNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 620
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC--NQKLVEDVDWVLKKM 364
V+ L + +A L M P ++YK + LC + E D+ L +M
Sbjct: 621 NPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDF-LVEM 679
Query: 365 VQQGFVPRMGMWREIV-GCVTFGKDN 389
V +GF+P +R + G + G D+
Sbjct: 680 VNKGFMPEFSSFRMLAEGLLNLGMDD 705
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 128/283 (45%), Gaps = 2/283 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P++ Y ++ L Q +M + E D F YN + + G + +
Sbjct: 298 FEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEG--HDPDVFTYNTVINCLSKNGELDE 355
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A + M C P TFN ++ L S E + G+ D NIL+
Sbjct: 356 AKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILIN 415
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G+ + +E C P+ TY+ L+ LC G + A LL MES G
Sbjct: 416 ALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPR 475
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
TVT+N +I L K+ ++EE ++ ++M +G ++ ++ ++ GL KR +A EL+
Sbjct: 476 STVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELI 535
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+M+ E + P+ ++Y ++ C Q ++ +L+ M GF
Sbjct: 536 EQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGF 578
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 147/299 (49%), Gaps = 6/299 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ ++P+ Y +IN L++ D + I+ ++ V++ C D +N + + + R
Sbjct: 330 QEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM-VDRGC-LPDTTTFNTLIVALSSQNR 387
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI--YTSAAKLGVEIDACCL 201
+ +A++ ++ P V TFN+++N L K+ GI + G D
Sbjct: 388 LEEALDLARELTVKGLSPDVYTFNILINAL--CKVGDPHLGIRLFEEMKSSGCTPDEVTY 445
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ LC G L A +L+E C + TY+T++ LC+K +EEA + ++M++
Sbjct: 446 NILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDA 505
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI VTFN LI GL K ++++ +L+E+M +G PN+ +Y +L + +
Sbjct: 506 QGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKK 565
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +++ M V+Y LI+GLC + +L+ M +G P + ++
Sbjct: 566 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVI 624
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 151/306 (49%), Gaps = 3/306 (0%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ VL++ +R+ Y P+ YT++I ++ ++ +K C+ D YNV+
Sbjct: 228 MEVLDRQLQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMR-KKGCK-PDVVTYNVL 284
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
GR+ +AI+ L +MPSY C P+V T N++L + S + + + + + + G
Sbjct: 285 INGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGC 344
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
NIL+ LC L A VL++ PK C PN +Y+ L+HG C++ ++ A
Sbjct: 345 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIE 404
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LE M S G D VT+N L++ L K GKV+ +++L ++ KGC P +Y V+ GL
Sbjct: 405 YLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLT 464
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ A EL+ M + + P ++Y L+ GL + V++ + M P
Sbjct: 465 KVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAV 524
Query: 375 MWREIV 380
+ I+
Sbjct: 525 TYNAIM 530
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 142/300 (47%), Gaps = 6/300 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++I ++ D ++++R+ V D YN I +G++ +A+
Sbjct: 174 PDVITYNVLIGGYCKSGEIDKALEVLERMSVA-----PDVVTYNTILRSLCDSGKLKEAM 228
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L C+P V T+ +++ + G+ + K G + D N+L+ G+
Sbjct: 229 EVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 288
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G L+ A L+ P C+PNV T++ ++ +C G +A LL M +G
Sbjct: 289 CKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSV 348
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VTFNILI+ L ++ + + +LE+M GC PNS SY +L+G +K+ A E +
Sbjct: 349 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEI 408
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
M+ P V+Y L+ LC V+ +L ++ +G P + + ++ G GK
Sbjct: 409 MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 468
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 144/290 (49%), Gaps = 4/290 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
++K P+ Y ++IN + + R D + + C+ + +N+I G
Sbjct: 270 RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG-CK-PNVITHNIILRSMCSTG 327
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R A L DM C PSV TFN+++N L +L G + K G ++ N
Sbjct: 328 RWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYN 387
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
LL G C+ ++ A L+ + C P++ TY+TL+ LC+ G V+ A +L ++ S+
Sbjct: 388 PLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSK 447
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G +T+N +I GL K GK E ++LLE M+ KG P+ +Y +L GL + + EA
Sbjct: 448 GCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEA 507
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVLKKMVQQGFVP 371
++ M + PS V+Y ++ GLC Q+ +D+ L MV++G P
Sbjct: 508 IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDF-LAYMVEKGCKP 556
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 3/170 (1%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NI L+ L NG LE L+ Q P+V ++L+ G C G ++A ++E +E+
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D +T+N+LI G K G++++ +++LERM P+ +Y +L L D + E
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKE 226
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A E++ R + P ++Y LI CN V +L +M ++G P
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKP 276
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 156/293 (53%), Gaps = 4/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + +I+ + R+ E ++ + V K C S F N++ + G + +AI
Sbjct: 84 PNVITHNIILRSMCSTGRWMDAEKLLTEM-VRKGCSPSVVTF-NILINFLCRKGLLGRAI 141
Query: 149 ETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L MP++ C P+ ++N +L+ K+ IQ + ++ G D N +L
Sbjct: 142 DILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR-GCYPDIVTYNTMLTA 200
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC++G ++AA +L++ + C P + TY+T++ GL + G ++A LL M +G+ D
Sbjct: 201 LCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPD 260
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T++ LI+GL ++GKVEE +K ++G G PN+ +Y +++GL ++ A + +
Sbjct: 261 VITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLA 320
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI + P+ VSY LI G+ N+ L ++ +L ++ +G V + + +V
Sbjct: 321 YMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 142/282 (50%), Gaps = 3/282 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ VL++ +++ Y P+ YT++I ++ + + C+ D YNV+
Sbjct: 1 MEVLDRQLEKECY-PDVITYTILIEATCAESGVGQAMKLLDEMG-SRGCK-PDVVTYNVL 57
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
GR+ +AI+ L MPSY P+V T N++L + S + + + + T + G
Sbjct: 58 VNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGC 117
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
NIL+ LC G L A +L++ P C PN +Y+ L+HG C++ ++ A
Sbjct: 118 SPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQ 177
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LE M S G D VT+N +++ L K GKV+ ++LL ++ KGC P +Y V+ GL
Sbjct: 178 YLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLS 237
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+ +A EL+ M + + P ++Y LI GL + VE+
Sbjct: 238 KVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEE 279
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 1/233 (0%)
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C+P V T+ +++ + G+ + G + D N+L+ G+C+ G L+ A
Sbjct: 12 CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
L+ P +PNV T++ ++ +C G +A LL M +G VTFNILI+ L
Sbjct: 72 KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
++G + + +LE+M GC PNS SY +L+G +K+ A + + M+ P
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNR 390
V+Y ++ LC V+ +L ++ +G P + + ++ G GK ++
Sbjct: 192 VTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQ 244
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 135/270 (50%), Gaps = 2/270 (0%)
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+++ R ++EK C + D Y ++ + +A++ L +M S C P V T+N+++N
Sbjct: 2 EVLDR-QLEKEC-YPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVN 59
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
+ E S G + + NI+L+ +C G A +L E ++ C P
Sbjct: 60 GMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSP 119
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+V T++ L++ LC KG + A +LE+M + G +++++N L+ G K+ K++ ++ L
Sbjct: 120 SVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYL 179
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E M +GCYP+ +Y +L L + A EL+ ++ + SP ++Y +I GL
Sbjct: 180 EIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKV 239
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ +L +M +G P + + ++
Sbjct: 240 GKTDQAVELLHEMRGKGLKPDVITYSSLIA 269
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%)
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
M++L+R K CYP+ +Y ++ + +A +L+ M P V+Y L++G
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRM 373
+C + +++ L M G P +
Sbjct: 61 MCKEGRLDEAIKFLNSMPSYGSQPNV 86
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 36/313 (11%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++ KL +F+ +E+++ ++ +G + ++ YG G+I +A++T
Sbjct: 122 YKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGR-KGKIQEAVDTFER 180
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M +NC PSV ++N ++N+LV + + +Y VE D I +K C G
Sbjct: 181 MDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGR 240
Query: 214 LEAAFYVLDEFPKQNCE-----------------------------------PNVRTYST 238
AA +L P C P+V T++
Sbjct: 241 PYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNK 300
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+H LC+KG V E+ L +++ G+ + TFNI I GL K+G ++ ++LL + +G
Sbjct: 301 LVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREG 360
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
P+ +Y V+ GL K R EA+E + +M+ P+ +Y +I G C + +V D +
Sbjct: 361 LRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDAN 420
Query: 359 WVLKKMVQQGFVP 371
+LK V +GF P
Sbjct: 421 RILKDAVFKGFKP 433
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 109/198 (55%), Gaps = 3/198 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ +N ++ L L + A+ G + D N+++ GLC+ G L A ++
Sbjct: 468 PSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHL 527
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ + + C P++ TY+TL+ G C + ++ A L+ RM S+G+ D +T+N L++GL K
Sbjct: 528 IGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCK 587
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
K EE M++ + M KGC PN +Y ++ L + K+ EA +L+G M + ++P VS
Sbjct: 588 TAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVS 647
Query: 341 YKKLIHGLCNQKLVEDVD 358
+ LI G C V D+D
Sbjct: 648 FGTLITGFCK---VGDLD 662
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 8/315 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + + I L + D ++ + E L D YN + R+ +A
Sbjct: 328 PNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGL--RPDVVTYNTVICGLCRKSRVVEAE 385
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M + P+ T+N +++ + + I A G + D L+ G
Sbjct: 386 ECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGF 445
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++G+ + A V + + P++ Y+TL+ GLC++G + A L+ M +G D
Sbjct: 446 CQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDI 505
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N++I+GL K G + + L+ KGC P+ +Y ++ G + + A ELV R
Sbjct: 506 WTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNR 565
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
M + M+P ++Y L++GLC E+V + K M ++G P + + I+ +
Sbjct: 566 MWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLC---- 621
Query: 389 NRNRVYVTETVDSLA 403
N V E VD L
Sbjct: 622 --NSKKVNEAVDLLG 634
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 145/303 (47%), Gaps = 8/303 (2%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI--KVEKLCRFSDGF 129
+ + ++N+ ++ K P+ Y LIIN L + + D I + K C D F
Sbjct: 487 LPALQLMNEMAE-KGCKPDIWTYNLIINGLC---KMGCLSDANHLIGDAITKGC-IPDIF 541
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN + ++ AIE + M S P V T+N +LN L E+ I+ +
Sbjct: 542 TYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAM 601
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ G + N +++ LC + + A +L E + P+V ++ TL+ G C+ G++
Sbjct: 602 TEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDL 661
Query: 250 EEAFGLLERMESE-GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ A+GL ME + + T T+NI+IS +Q ++ ++L MK GC P++ +Y+
Sbjct: 662 DGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRV 721
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + + + I + PS ++ ++++ LC + V++ ++ MVQ+
Sbjct: 722 LIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKD 781
Query: 369 FVP 371
VP
Sbjct: 782 IVP 784
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 141/332 (42%), Gaps = 6/332 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + ++ F DP ++V K P+ +Y +I L Q +
Sbjct: 434 DEFTYCSLVNGFCQDGDPDQAMAVFKD-GLGKGLRPSIIVYNTLIKGLCQQGLILPALQL 492
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN-LVLNL 172
M + EK C+ D + YN+I G +S A + D + C P + T+N LV
Sbjct: 493 MNEM-AEKGCK-PDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGY 550
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
KL I+ + ++ G+ D N LL GLC+ E + ++ C PN
Sbjct: 551 CRQLKLDSAIELVNRMWSQ-GMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPN 609
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ TY+T++ LC V EA LL M+S+G+ D V+F LI+G K G ++ L
Sbjct: 610 IITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFR 669
Query: 293 RM-KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
M K +A+Y ++ ++ A L M P +Y+ LI G C
Sbjct: 670 GMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKT 729
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
V L + +++GF+P + + ++ C+
Sbjct: 730 GNVNQGYKFLLENIEKGFIPSLTTFGRVLNCL 761
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 18/301 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRISK 146
+P+ Y I+N L + F+ + R+K +K+ SD + Y + IK + GR
Sbjct: 187 DPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKV--ESDVYTYTIRIKSFCR-TGRPYA 243
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL----- 201
A+ L +MP C+ + + V+ G A +L E+ CCL
Sbjct: 244 ALRLLRNMPVLGCFSNAVAYCTVVTGFYEF-------GDNDRARELFDEMLECCLCPDVT 296
Query: 202 --NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ LC+ G + + + D+ K+ PN+ T++ + GLC++G+++ A LL +
Sbjct: 297 TFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCV 356
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
EG+ D VT+N +I GL ++ +V E + L +M G PN +Y ++ G K
Sbjct: 357 SREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMV 416
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+A ++ + + P +Y L++G C + V K + +G P + ++ +
Sbjct: 417 VDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTL 476
Query: 380 V 380
+
Sbjct: 477 I 477
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 101/221 (45%), Gaps = 9/221 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++N L + + + + +I + + EK C + + +I+ N + ++++A+
Sbjct: 573 PDVITYNTLLNGLCKTAKSEEVMEIFKAM-TEKGCAPNIITYNTIIESLCN-SKKVNEAV 630
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID----ACCLNIL 204
+ L +M S P V +F ++ G++ G Y + + D NI+
Sbjct: 631 DLLGEMKSKGLTPDVVSFGTLITGFCKV---GDLDGAYGLFRGMEKQYDVSHTTATYNII 687
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ E N++ A + E K C+P+ TY L+ G C+ GNV + + L +G
Sbjct: 688 ISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGF 747
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
TF +++ L + KV+E + ++ M K P++ +
Sbjct: 748 IPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVN 788
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 149/306 (48%), Gaps = 30/306 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLCRFSDGFFYNVI 134
P+ Y ++ L A+R+ ++D+M+ + + LCR +G F V
Sbjct: 215 PDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCR--NGLFERVH 272
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+++ MA + C P V+ + +++ + + +GI G+
Sbjct: 273 EVHAQMA--------------EHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ C N LLKGLC E A +L E ++C + T++ L+ LC+ G V+
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+LE+M G D +T+ +I+G K+G ++E + LL M GC PN+ SY VL GL
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLC 438
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+R+ +A+EL+ +MI + P+ V++ LI+ LC + LVE +LK+M+ G P +
Sbjct: 439 SAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 498
Query: 375 MWREIV 380
+ ++
Sbjct: 499 SYSTVI 504
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 154/333 (46%), Gaps = 39/333 (11%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++VL+ ++R P +Y + + +A F +++ + + C G V+
Sbjct: 131 LAVLDDMARRG-CAPTPPMYHVTLEAACRASGFRGAVGVLRDLH-GRGCALDVGNCNLVL 188
Query: 135 KIYGNMAGRISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ + G + +A+ L D+ PS+ C P V ++N VL L A+ +G +Q + G
Sbjct: 189 QAVCDQ-GPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAG 247
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ + L+ LC NG E V + + C P+VR Y+T++ G+C++ +E A
Sbjct: 248 CPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVAR 307
Query: 254 GLLERM--------------------------ESEGIDA---------DTVTFNILISGL 278
G+L RM E+EG+ A D VTFNIL+ L
Sbjct: 308 GILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFL 367
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
+ G V+ +++LE+M GC P+ +Y V+ G + EA L+ M P+
Sbjct: 368 CQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNT 427
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
VSY ++ GLC+ + D + ++ +M+QQG P
Sbjct: 428 VSYTIVLKGLCSAERWVDAEELMSQMIQQGCPP 460
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 2/284 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y ++ L A R++ E ++ + +K C D +N++ + G + +
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEM-FDKDCPLDD-VTFNILVDFLCQNGLVDRV 376
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
IE L M + C P V T+ V+N L E + S A G + I+LKG
Sbjct: 377 IEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKG 436
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC A ++ + +Q C PN T++TL++ LC+KG VE+A LL++M G D
Sbjct: 437 LCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 496
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++++ +I GL K G +E ++LL M KG PN+ Y + L + R + ++
Sbjct: 497 LISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFE 556
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + V Y +I LC + + L MV G VP
Sbjct: 557 NIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVP 600
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 140/284 (49%), Gaps = 2/284 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD ++ + ++++ L Q D + ++++++ +E C D Y + G I
Sbjct: 351 KDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQM-LEHGC-MPDVITYTTVINGFCKEGLI 408
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ L M + C P+ ++ +VL L SA+ + + + + + + G + N L
Sbjct: 409 DEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTL 468
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ LC+ G +E A +L + C P++ +YST++ GL + GN +EA LL M +G+
Sbjct: 469 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGM 528
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+T+ ++ + S L +G++ + +++ E ++ ++ Y V+ L + A E
Sbjct: 529 SPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIE 588
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ M+ P+ +Y LI GL ++ V++ +L ++ +G
Sbjct: 589 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++ LC G + A VLD+ ++ C P Y + C A G+L + G
Sbjct: 117 LVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRG 176
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLL-ERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
D N+++ + QG V+E ++LL + + GC P+ SY VL GL +R+
Sbjct: 177 CALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHV 236
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++L+ M+ P+ V++ LI LC L E V V +M + G P + M+ I+
Sbjct: 237 QDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATII 294
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 96/234 (41%), Gaps = 42/234 (17%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GRI+ A+ L DM C P+ ++
Sbjct: 125 GRIADALAVLDDMARRGCAPTPPMYH---------------------------------- 150
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL-ERME 260
+ L+ C A VL + + C +V + ++ +C++G V+EA LL + +
Sbjct: 151 -VTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLP 209
Query: 261 SEGIDADTVTFNILISGL---RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
S G + D V++N ++ GL R+ G V++ L+E M GC PN ++ ++ L
Sbjct: 210 SFGCEPDVVSYNAVLRGLCMARRWGHVQD---LMEEMVAAGCPPNIVTFSTLIGHLCRNG 266
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
F E+ +M +P Y +I G+C ++ +E +L +M G P
Sbjct: 267 LFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSP 320
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 150/300 (50%), Gaps = 37/300 (12%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++I KL + DA+ I+ ++K+E++ D F V+ Y N +G +A++ +
Sbjct: 76 YHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFIC-VLNSYKN-SGLGDRALKMFYR 133
Query: 154 MPSYNCWPSVKTFNLVLNLLV--SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+ + C P+VK +N +L+ L+ S + I +Y + G+E + N+LLK LC+N
Sbjct: 134 IKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKN 193
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA------------------- 252
G L+ A +L E K+ C P+ +Y+T++ +CE G VEEA
Sbjct: 194 GKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNAL 253
Query: 253 -------------FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
FGL++ M G+D + V+++ +IS L G+VE + +L +M +GC
Sbjct: 254 ICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGC 313
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL-CNQKLVEDVD 358
PN ++ ++ G R E L M+ E + P+ V Y L++GL C+ L E VD
Sbjct: 314 RPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVD 373
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 137/293 (46%), Gaps = 2/293 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +Y ++N L + D+ R++ + CR + + ++ + AG + A
Sbjct: 350 PNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVK-AGDLQGAS 408
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M + P+V + ++++L ++ + + + A G N +KGL
Sbjct: 409 EVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGL 468
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G + A V+D+ + C P+ RTY+ L+ GL ++EA L+ +E ++ +
Sbjct: 469 CCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNL 528
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N ++ G GK E +++L RM G P++ + V+Y + A + + R
Sbjct: 529 VTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDR 588
Query: 329 MICER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + P +++ L+ G+CN +E+ L KM+ +G P + W +V
Sbjct: 589 ITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLV 641
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 149/361 (41%), Gaps = 67/361 (18%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK-----------LCR- 124
+L + SKR P+ YT ++ + + R + ++ +R E LCR
Sbjct: 202 LLVEMSKRGCV-PDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNALICGLCRE 260
Query: 125 -------------FSDGFFYNVIKIYGNMA-----GRISKAIETLFDMPSYNCWPSVKTF 166
+G NV+ ++ G + A+ L M C P+V TF
Sbjct: 261 GRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTF 320
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
+ ++ GE G++ GV + N LL GLC +GNL A V K
Sbjct: 321 SSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEK 380
Query: 227 QN-CEPNVRTYSTLMHG-----------------------------------LCEKGNVE 250
C PNV TYSTL+HG LC+ +
Sbjct: 381 DCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFD 440
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A+ L++ M ++G VTFN I GL G+V M+++++M+ GC P++ +Y E+L
Sbjct: 441 QAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELL 500
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
GL EA EL+ + ++ + V+Y +++G + E V VL +M+ G
Sbjct: 501 DGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVK 560
Query: 371 P 371
P
Sbjct: 561 P 561
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 16/311 (5%)
Query: 78 LNQYSKRKDYN--PNEALYTLIINKL--AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
L + + K++ P +Y +++ L +F I + + ++ E + + F YNV
Sbjct: 128 LKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGM--EPNVFTYNV 185
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ G++ A + L +M C P ++ V+ + G ++ A + G
Sbjct: 186 LLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCED---GRVEEAREVARRFG 242
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
E N L+ GLC G + F ++DE +PNV +YS+++ L + G VE A
Sbjct: 243 AEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELAL 302
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+L +M G + TF+ L+ G G+V EG+ L M +G PN Y +L GL
Sbjct: 303 AVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGL 362
Query: 314 LDKKRFPEAKELVGRM----ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
EA ++ GRM C P+ +Y L+HG ++ V KMV G
Sbjct: 363 CCSGNLAEAVDVCGRMEKDCFCR---PNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGV 419
Query: 370 VPRMGMWREIV 380
P + ++ +V
Sbjct: 420 RPNVVVYTSMV 430
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 3/229 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +YT +++ L + FD ++ + + C + F IK GR+ A+
Sbjct: 421 PNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDG-CPPTVVTFNTFIKGL-CCGGRVLWAM 478
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M Y C P +T+N +L+ L S E + + VE++ N ++ G
Sbjct: 479 RVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGF 538
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES-EGIDAD 267
+G E VL +P+ T + +++ + G V A L+R+ + + + D
Sbjct: 539 SSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPD 598
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ L+ G+ +EE + L +M KG +PN A++ ++ G K
Sbjct: 599 IIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKK 647
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TY ++ L ++ +L +M+ E I +F +++ + G + +K+ R+
Sbjct: 75 TYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRI 134
Query: 295 KGKGCYPNSASYQEVLYGLLDKK--RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
K GC P Y +L LL + +F + M E M P+ +Y L+ LC
Sbjct: 135 KEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNG 194
Query: 353 LVEDVDWVLKKMVQQGFVP 371
++ +L +M ++G VP
Sbjct: 195 KLDGACKLLVEMSKRGCVP 213
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 141/303 (46%), Gaps = 6/303 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++I+ ++ D ++ R+ V D YN I +G++ +A+
Sbjct: 125 PDVITYNVLISGYCKSGEIDNALQVLDRMNVA-----PDVVTYNTILRTLCDSGKLKQAM 179
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L C+P V T+ +++ G+ + G + D N+L+ G+
Sbjct: 180 EVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 239
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G L+ A L+ P C+PNV T++ ++ +C G +A LL M +G
Sbjct: 240 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 299
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VTFNILI+ L +QG + + +LE+M GC PNS SY +L+G +K+ A E +
Sbjct: 300 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 359
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
M+ P V+Y L+ LC V+ +L ++ +G P + + ++ G GK
Sbjct: 360 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 419
Query: 388 DNR 390
R
Sbjct: 420 TER 422
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 143/284 (50%), Gaps = 2/284 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + +I+ + R+ E ++ + + K C S F N++ + G + +AI
Sbjct: 262 PNVITHNIILRSMCSTGRWMDAEKLLSDM-LRKGCSPSVVTF-NILINFLCRQGLLGRAI 319
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L MP + C P+ ++N +L+ K G D N LL L
Sbjct: 320 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 379
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++G ++ A +L++ + C P + TY+T++ GL + G E A LL+ M +G+ D
Sbjct: 380 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 439
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ L+SGL ++GKV+E +K ++G G PN+ +Y ++ GL ++ A + +
Sbjct: 440 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 499
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
MI +R P+ +Y LI G+ + L ++ +L ++ +G V +
Sbjct: 500 MISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 543
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 127/254 (50%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YNV+ GR+ +AI+ L +MPSY C P+V T N++L + S + + + +
Sbjct: 228 DVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 287
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ + G NIL+ LC G L A +L++ P C PN +Y+ L+HG C++
Sbjct: 288 SDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKE 347
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
++ A L+ M S G D VT+N L++ L K GKV+ +++L ++ KGC P +Y
Sbjct: 348 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 407
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
V+ GL + A +L+ M + + P ++Y L+ GL + V++ +
Sbjct: 408 NTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 467
Query: 367 QGFVPRMGMWREIV 380
G P + I+
Sbjct: 468 LGIRPNAITYNSIM 481
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 145/301 (48%), Gaps = 2/301 (0%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
Q R + P+ Y I+ L + + +++ R +++K C + D Y ++
Sbjct: 148 QVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR-QLQKEC-YPDVITYTILIEATC 205
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ +A++ L +M + P V T+N+++N + E + G + +
Sbjct: 206 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 265
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NI+L+ +C G A +L + ++ C P+V T++ L++ LC +G + A +LE+M
Sbjct: 266 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 325
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G +++++N L+ G K+ K++ ++ L+ M +GCYP+ +Y +L L +
Sbjct: 326 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 385
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A E++ ++ + SP ++Y +I GL E +L +M ++G P + + +
Sbjct: 386 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 445
Query: 380 V 380
V
Sbjct: 446 V 446
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L+ L NG LE F L+ + P++ ++L+ G C G ++A ++E +E G
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+N+LISG K G+++ +++L+RM P+ +Y +L L D + +A E
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ R + + P ++Y LI C + V +L +M +G P
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKP 227
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 8/223 (3%)
Query: 88 NPNEALYTLIINKLAQAKRFD-AIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
PN Y +++ + K+ D AIE DIM V + C + D YN + G++
Sbjct: 331 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIM----VSRGC-YPDIVTYNTLLTALCKDGKV 385
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+E L + S C P + T+N V++ L + + G++ D + L
Sbjct: 386 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 445
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GL G ++ A + PN TY+++M GLC+ + A L M S+
Sbjct: 446 VSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRC 505
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
T+ ILI G+ +G +E + LL + +G S++ Q
Sbjct: 506 KPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQ 548
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 149/322 (46%), Gaps = 40/322 (12%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++N +A R IED R + + D F +N + + GR+ A+ D
Sbjct: 133 YNTMVNGYCRAGR---IED--ARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDD 187
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M C PSV T++++L+ A Y + + G E D N+L+ +C G+
Sbjct: 188 MLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGD 247
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYS-----------------------------------T 238
++ A +L + P C+P+ TY+ T
Sbjct: 248 VDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNT 307
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++ LC++G V+ A +++ M G D VT++ ++ GL G+V++ ++LL R+K G
Sbjct: 308 IVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 367
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C P++ +Y VL GL +++ A+EL+ M+C P V++ +I LC + LV+
Sbjct: 368 CKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAI 427
Query: 359 WVLKKMVQQGFVPRMGMWREIV 380
V+++M + G P + + I+
Sbjct: 428 KVVEQMSENGCNPDIVTYNSII 449
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 141/284 (49%), Gaps = 2/284 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y+++++ +A + ++ ++ K C D YNV+ G + +A
Sbjct: 194 SPSVVTYSILLDATCKASGYRQAMVLLDEMRA-KGCE-PDIVTYNVLINAMCNEGDVDEA 251
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L D+PS+ C P T+ VL L ++ + E++ ++ A D N ++
Sbjct: 252 LNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTS 311
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G ++ A V+D + C P++ TYS+++ GLC+ G V++A LL R++S G D
Sbjct: 312 LCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPD 371
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+ + ++ GL + E +L+ M C P+ ++ V+ L K A ++V
Sbjct: 372 TIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVE 431
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+M +P V+Y +I GLCN++ ++D +L + G P
Sbjct: 432 QMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKP 475
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 141/292 (48%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT ++ L ++R+ +E++ + K D +N I G + +AI
Sbjct: 265 PDAVTYTPVLKSLCGSERWKEVEELFAEMASNKC--APDEVTFNTIVTSLCQQGLVDRAI 322
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + M + C P + T++ +L+ L + + + G + D +LKGL
Sbjct: 323 KVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGL 382
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C E A ++ E +C P+ T++T++ LC+KG V+ A ++E+M G + D
Sbjct: 383 CSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDI 442
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N +I GL + +++ M+LL ++ GC P+ ++ +L GL R+ +A++L+
Sbjct: 443 VTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVN 502
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ P ++ +I LC + L+ LK M + G +P + +V
Sbjct: 503 MMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVV 554
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 120/240 (50%), Gaps = 6/240 (2%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GR++ A E +F + +V T+N ++N A G I+ + + D
Sbjct: 111 GGRVADA-ERVF--ATLGASATVVTYNTMVNGYCRA---GRIEDARRLISGMPFPPDTFT 164
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L++ LC G + A V D+ + C P+V TYS L+ C+ +A LL+ M
Sbjct: 165 FNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMR 224
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++G + D VT+N+LI+ + +G V+E + +L + GC P++ +Y VL L +R+
Sbjct: 225 AKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWK 284
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E +EL M + +P V++ ++ LC Q LV+ V+ M + G +P + + I+
Sbjct: 285 EVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSIL 344
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 147/313 (46%), Gaps = 12/313 (3%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR--FSD 127
D + ++S L Y + P+ YT ++ L ++++ E++M E +C D
Sbjct: 355 DAVELLSRLKSYGCK----PDTIAYTTVLKGLCSIEQWEHAEELM----AEMVCSDCPPD 406
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+N + G + +AI+ + M C P + T+N +++ L + + + + +
Sbjct: 407 EVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLS 466
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ G + D N LLKGLC E A ++ +C P+ T++T++ LC+KG
Sbjct: 467 NLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKG 526
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+ +A L+ M G + T+NI++ L K GK +E +KLL M P+ +Y
Sbjct: 527 LLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYN 584
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
V+ + + EA +L+ M+ +SP ++Y+ L +G+C + + +L ++
Sbjct: 585 TVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDM 644
Query: 368 GFVPRMGMWREIV 380
G P + +I+
Sbjct: 645 GLSPDATFYNDIL 657
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 4/291 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ I++ L R D +++ R+K C+ + V+K ++ + A
Sbjct: 335 PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG-CKPDTIAYTTVLKGLCSIE-QWEHAE 392
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E + +M +C P TFN V+ L L + ++ G D N ++ GL
Sbjct: 393 ELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C ++ A +L C+P++ T++TL+ GLC E+A L+ M D
Sbjct: 453 CNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDA 512
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
TFN +I+ L ++G + + ++ L+ M GC PN ++Y V+ LL + EA +L+
Sbjct: 513 TTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSG 572
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
M +P ++Y +I + +E+ +L+ MV G P +R +
Sbjct: 573 MT--NGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSL 621
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 133/321 (41%), Gaps = 37/321 (11%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR-I 144
D P+E + +I L Q D +++++ E C D YN I I G R I
Sbjct: 402 DCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMS-ENGCN-PDIVTYNSI-IDGLCNERCI 458
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+E L ++ SY C P + TFN +L L S + + + + + DA N +
Sbjct: 459 DDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTV 518
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPN-------------------------------- 232
+ LC+ G L A L + C PN
Sbjct: 519 ITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTP 578
Query: 233 -VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+ TY+T++ + + G +EEA LL M S G+ DT+T+ L G+ ++ + +++L
Sbjct: 579 DLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRML 638
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
R++ G P++ Y ++L G R A + M+ P +Y L+ L +
Sbjct: 639 CRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYE 698
Query: 352 KLVEDVDWVLKKMVQQGFVPR 372
L+++ +L + G + +
Sbjct: 699 CLLDEAKQLLVNLCSLGVLDK 719
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+K LC G + A V F V TY+T+++G C G +E+A L+ M
Sbjct: 102 NILIKRLCSGGRVADAERV---FATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMP- 157
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
DT TFN LI L +G+V + + + + M +GC P+ +Y +L + +
Sbjct: 158 --FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQ 215
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A L+ M + P V+Y LI+ +CN+ V++ +L + G P
Sbjct: 216 AMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKP 265
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 13/182 (7%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQN----CEP-NVRTYSTLMHGLCEKGNVEEAFGLLERM 259
L+ L + ++ A ++D C P V + L+ LC G V +A ER+
Sbjct: 65 LRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADA----ERV 120
Query: 260 -ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
+ G A VT+N +++G + G++E+ +L+ M P++ ++ ++ L + R
Sbjct: 121 FATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMPFP---PDTFTFNPLIRALCVRGR 177
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
P+A + M+ SPS V+Y L+ C +L +M +G P + +
Sbjct: 178 VPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNV 237
Query: 379 IV 380
++
Sbjct: 238 LI 239
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 148/322 (45%), Gaps = 40/322 (12%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++N +A R IED R + + D F +N + + GRI A+ D
Sbjct: 222 YNTMVNGYCRAGR---IED--ARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDD 276
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M C PSV T++++L+ Y + + G E D N+L+ +C G+
Sbjct: 277 MLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGD 336
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYS-----------------------------------T 238
++ A +L P C+P+ TY+ T
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNT 396
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++ LC++G V+ A +++ M G AD VT++ ++ GL G+V++ ++LL R+K G
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C P++ +Y VL GL +++ A+EL+ M+C P V++ ++ LC + LV+
Sbjct: 457 CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAI 516
Query: 359 WVLKKMVQQGFVPRMGMWREIV 380
V+++M + G P + + I+
Sbjct: 517 RVVEQMSENGCSPDIVTYNCII 538
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 140/292 (47%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT ++ L ++R+ +E+++ + D +N I G + +AI
Sbjct: 354 PDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC--APDEVTFNTIVTSLCQQGLVDRAI 411
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E + M + C + T++ +L+ L + + + G + D +LKGL
Sbjct: 412 EVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGL 471
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C E A ++ E +C P+ T++T++ LC+KG V+ A ++E+M G D
Sbjct: 472 CSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDI 531
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N +I GL + +++ M+LL ++ GC P+ ++ +L GL R+ +A++L+
Sbjct: 532 VTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMAN 591
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ P +++ +I LC + L+ LK M + G VP + +V
Sbjct: 592 MMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVV 643
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 135/284 (47%), Gaps = 2/284 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y+++++ + + ++ ++ K C D YNV+ G + +A
Sbjct: 283 SPSVVTYSILLDATCKESGYRQAMALLDEMRA-KGCE-PDIVTYNVLINAMCNEGDVDEA 340
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L ++PS+ C P T+ VL L ++ + E++ + D N ++
Sbjct: 341 LNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTS 400
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G ++ A V+D + C ++ TYS+++ GLC+ G V++A LL R++S G D
Sbjct: 401 LCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPD 460
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+ + ++ GL + E +L+ M C P+ ++ V+ L K A +V
Sbjct: 461 TIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVE 520
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+M SP V+Y +I GLCN+ ++D +L + G P
Sbjct: 521 QMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKP 564
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 120/241 (49%), Gaps = 10/241 (4%)
Query: 142 GRISKAIETLFDM--PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
GR+S A E +F PS +V T+N ++N A G I+ + D
Sbjct: 201 GRVSDA-ERVFAALGPSA----TVVTYNTMVNGYCRA---GRIEDARRLINGMPFPPDTF 252
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L++ LC G + A V D+ + C P+V TYS L+ C++ +A LL+ M
Sbjct: 253 TFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEM 312
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
++G + D VT+N+LI+ + +G V+E + +L + GC P++ +Y VL L +R+
Sbjct: 313 RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERW 372
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
E +EL+ M +P V++ ++ LC Q LV+ V+ M + G V + + I
Sbjct: 373 KEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSI 432
Query: 380 V 380
+
Sbjct: 433 L 433
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 4/287 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ I++ L R D +++ R+K C+ + V+K + + +A E + +
Sbjct: 429 YSSILDGLCDVGRVDDAVELLSRLKSYG-CKPDTIAYTTVLKGLCSTE-QWERAEELMAE 486
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M +C P TFN V+ L L + ++ G D N ++ GLC
Sbjct: 487 MLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESC 546
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A +L + C+P++ T++TL+ GLC E+A L+ M D +TFN
Sbjct: 547 IDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNT 606
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I+ L ++G + + ++ L+ M GC PNS++Y V+ LL + A EL+ M
Sbjct: 607 VITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMT--N 664
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+P ++Y +I L +E+ +L+ MV G P +R +
Sbjct: 665 GTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLA 711
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 148/352 (42%), Gaps = 43/352 (12%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR--FSD 127
D + ++S L Y + P+ YT ++ L ++++ E++M E LC D
Sbjct: 444 DAVELLSRLKSYGCK----PDTIAYTTVLKGLCSTEQWERAEELM----AEMLCSDCPPD 495
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+N + G + +AI + M C P + T+N +++ L + + + +
Sbjct: 496 EVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLS 555
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
G + D N LLKGLC E A ++ + NC P+ T++T++ LC+KG
Sbjct: 556 DLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKG 615
Query: 248 NVEEAFGLLERMESEG-----------IDA----------------------DTVTFNIL 274
+ +A L+ M G +DA D +T+N +
Sbjct: 616 LLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTV 675
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
IS L K GK+EE + LL M G P++ +Y+ + YG+ + A ++ R+ +
Sbjct: 676 ISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGL 735
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
SP Y ++ G C + + MV G +P + ++ + +G
Sbjct: 736 SPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYG 787
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 125/319 (39%), Gaps = 35/319 (10%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
D P+E + ++ L Q D +++++ E C D YN I I
Sbjct: 490 SDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMS-ENGCS-PDIVTYNCIIDGLCNESCI 547
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+E L D+ S C P + TFN +L L + + + + + + D N +
Sbjct: 548 DDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTV 607
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS--------------------------- 237
+ LC+ G L A L + C PN TYS
Sbjct: 608 ITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTP 667
Query: 238 ------TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
T++ L + G +EEA LL M S G+ DT T+ L G+ ++ + +++L
Sbjct: 668 DLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRML 727
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
R++ G P++ Y +VL G +R A + M+ P +Y L+ L
Sbjct: 728 RRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYG 787
Query: 352 KLVEDVDWVLKKMVQQGFV 370
L+++ +L + G +
Sbjct: 788 GLLDEAKRLLASLCSLGVL 806
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 6/170 (3%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+K LC +G + A V F V TY+T+++G C G +E+A L+ M
Sbjct: 191 NILIKRLCSDGRVSDAERV---FAALGPSATVVTYNTMVNGYCRAGRIEDARRLINGMP- 246
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
DT TFN LI L +G++ + + + + M +GC P+ +Y +L + + +
Sbjct: 247 --FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQ 304
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A L+ M + P V+Y LI+ +CN+ V++ +L + G P
Sbjct: 305 AMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKP 354
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 205 LKGLCENGNLEAAFYVLDEFPK---QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-E 260
L+ L + G ++ A + D +NC P V + L+ LC G V +A ER+
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPP-VVPCNILIKRLCSDGRVSDA----ERVFA 211
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G A VT+N +++G + G++E+ +L+ M P++ ++ ++ L + R P
Sbjct: 212 ALGPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFP---PDTFTFNPLIRALCVRGRIP 268
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A + M+ SPS V+Y L+ C + +L +M +G P
Sbjct: 269 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEP 319
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 41/247 (16%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
R + P+E + +I L Q AIE + +I E C + Y+++ AG
Sbjct: 594 RSNCPPDELTFNTVITSLCQKGLLTQAIETL--KIMAENGC-VPNSSTYSIVVDALLKAG 650
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A+E L M N P + T+N V++ L T A K+ +D
Sbjct: 651 KAQAALELLSGM--TNGTPDLITYNTVISNL-------------TKAGKMEEALD----- 690
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
LL+ + NG P+ TY +L +G+C + + A +L R++
Sbjct: 691 -LLRVMVSNGLC----------------PDTTTYRSLAYGVCREDGTDRAVRMLRRVQDT 733
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ DT +N ++ G + + + + M GC P+ ++Y +L L EA
Sbjct: 734 GLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEA 793
Query: 323 KELVGRM 329
K L+ +
Sbjct: 794 KRLLASL 800
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 153/308 (49%), Gaps = 6/308 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+LN+ S + P+ YT ++ L AKR++ +E + + VE C ++ F +++
Sbjct: 229 ILNRLSS-YGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEM-VENNCVPNEVTFDMLVRF 286
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ G + +AIE L M + C + N+V+N + + + G
Sbjct: 287 FCR-GGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSP 345
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D +LKGLC G E A +L+E ++NC PN T++T + LC+KG +++A L+
Sbjct: 346 DTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLI 405
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E+M G VT+N L++G QG+V+ ++L + C PN+ +Y +L GL
Sbjct: 406 EQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHA 462
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+R A EL+ M+ + V++ L+ C + VE+ ++++M++ G P + +
Sbjct: 463 ERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITF 522
Query: 377 REIVGCVT 384
++ +T
Sbjct: 523 NTLLDGIT 530
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 140/281 (49%), Gaps = 4/281 (1%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ YT +I L R DA+ + ++ E C+ S + +++ +G +A
Sbjct: 135 PDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE--CQPSVVTYTVLLEAVCKSSG-FGQA 191
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ L +M + C P++ T+N+++N + + + I + G + D +LKG
Sbjct: 192 MKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKG 251
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC E + E + NC PN T+ L+ C G VE A +L+RM G A+
Sbjct: 252 LCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTAN 311
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T NI+I+ + KQG+V++ + L M GC P++ SY VL GL R+ +AKEL+
Sbjct: 312 TTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLN 371
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
M+ + P+ V++ I LC + L++ ++++M + G
Sbjct: 372 EMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYG 412
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 142/306 (46%), Gaps = 6/306 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I VL++ S+ N L ++IN + + R D + + + D Y +
Sbjct: 297 IEVLDRMSEHG-CTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGC--SPDTISYTTV 353
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
AGR A E L +M NC P+ TFN + +L L + + + G
Sbjct: 354 LKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGC 413
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ N L+ G C G +++A + + P CEPN TY+TL+ GLC ++ A
Sbjct: 414 SVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAE 470
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL M + VTFN+L+S ++G VEE ++L+++M GC PN ++ +L G+
Sbjct: 471 LLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGIT 530
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ EA EL+ ++ + +S ++Y ++ L + +E+ + + G P+
Sbjct: 531 EDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAV 590
Query: 375 MWREIV 380
M+ +I+
Sbjct: 591 MYNKIL 596
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ +A G +D N L+ G C G L+AA ++ P P+ TY+ L+ GLC
Sbjct: 92 VLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVP---PDAYTYTPLIRGLC 148
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G V +A LL+ M VT+ +L+ + K + MK+L+ M+ KGC PN
Sbjct: 149 DRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIV 208
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ G+ + R +A++++ R+ P VSY ++ GLC K EDV+ + +M
Sbjct: 209 TYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEM 268
Query: 365 VQQGFVP 371
V+ VP
Sbjct: 269 VENNCVP 275
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 118/240 (49%), Gaps = 5/240 (2%)
Query: 131 YNVIKIYGNMA--GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
Y K+ N+ GR S A L V +N L+ YG +
Sbjct: 71 YLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYN---TLVAGYCRYGRLDAARRL 127
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
A + V DA L++GLC+ G + A +LD+ ++ C+P+V TY+ L+ +C+
Sbjct: 128 IASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSG 187
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+A +L+ M ++G + VT+N++I+G+ ++ +V++ ++L R+ G P++ SY
Sbjct: 188 FGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTT 247
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
VL GL KR+ + + L M+ P+ V++ L+ C +VE VL +M + G
Sbjct: 248 VLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHG 307
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 150/320 (46%), Gaps = 8/320 (2%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D +S T VLK +LN+ RK+ PNE + I L Q D +
Sbjct: 346 DTISYTTVLKGLCRAGRWEDAKELLNEMV-RKNCPPNEVTFNTFICILCQKGLIDQAILL 404
Query: 114 MQRIKVEKLCRFSDGFF-YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
++++ E C S G YN + + GR+ A+E +P C P+ T+ +L
Sbjct: 405 IEQMP-EYGC--SVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTG 458
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
L A+ + + ++ N+L+ C+ G +E A ++ + + C PN
Sbjct: 459 LCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPN 518
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ T++TL+ G+ E N EEA LL + S+GI DT+T++ ++ L ++ ++EE +++
Sbjct: 519 LITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFH 578
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
++ G P + Y ++L L + A + M+ P+ +Y LI GL +
Sbjct: 579 AVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREG 638
Query: 353 LVEDVDWVLKKMVQQGFVPR 372
L+++ +VL ++ +G + +
Sbjct: 639 LLKEARYVLSELCSRGVLSK 658
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 129/272 (47%), Gaps = 2/272 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R++ P+ YT+++ + ++ F ++ ++ K C + YNVI R
Sbjct: 165 RRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRA-KGCT-PNIVTYNVIINGMCREDR 222
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A + L + SY P ++ VL L +AK + +++ ++ + + ++
Sbjct: 223 VDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDM 282
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++ C G +E A VLD + C N + +++ +C++G V++AF L M S G
Sbjct: 283 LVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYG 342
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
DT+++ ++ GL + G+ E+ +LL M K C PN ++ + L K +A
Sbjct: 343 CSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAI 402
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
L+ +M S V+Y L++G C Q V+
Sbjct: 403 LLIEQMPEYGCSVGIVTYNALVNGFCVQGRVD 434
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L+ L +L A +++ + P+V + L+ LC +G +A +L E G
Sbjct: 42 LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +N L++G + G+++ +L+ M P++ +Y ++ GL D+ R +A
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIASMPVP---PDAYTYTPLIRGLCDRGRVGDALS 158
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ M+ PS V+Y L+ +C VL +M +G P + + I+
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVII 214
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 150/281 (53%), Gaps = 4/281 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRI-KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
Y II+KL++A+ FD +E ++ ++ + + D F +VI+ YG +AGR A++T
Sbjct: 52 YHSIIDKLSRARAFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYG-LAGRPRLALKTFT 110
Query: 153 DMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA-KLGVEIDACCLNILLKGLCE 210
+ ++ PSVK N +LN+ V K Y + + K GV + NIL+K LC+
Sbjct: 111 RIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCK 170
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
++E A V DE P PN+ TY+T++ G +G++ A + + +G D T
Sbjct: 171 KNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATT 230
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ +L+ G KQG++ + +K+++ M+ G PN +Y ++ +K+ EA+ L+ M+
Sbjct: 231 YTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDML 290
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ PS K+I LC VE+ + K+M+++ +P
Sbjct: 291 DKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLP 331
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 7/275 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN YT I+ E + I + D Y V+ + GR+S AI
Sbjct: 191 PNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGW--LPDATTYTVLMVGYCKQGRLSDAI 248
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA--AKLGVEIDACCLNILLK 206
+ + +M P+ T+ ++++ K GE + + K CC ++
Sbjct: 249 KVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCK--VID 306
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LCE+G +E A ++ ++NC P+ STL+H LC++G V EA L + E +G
Sbjct: 307 VLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFE-QGTIP 365
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+T+N LI+G+ ++G++ E +L + M K C PN+ +Y ++ G + E ++
Sbjct: 366 SLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRIL 425
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
M+ P+ +Y LI GL + DVD V+
Sbjct: 426 EEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVM 460
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 119 VEKLCRFSDGFFYNVIKIYGNM-AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
VEK CR + F YN++ I G M AG + + + L +M C P+ T+ L++ L +
Sbjct: 394 VEKRCR-PNAFTYNML-IKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESG 451
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
+ G++ + S A E+DA ++ L + GNL+ LD
Sbjct: 452 MEGDVDKV-MSMAMASREVDADSWDLFLHKIV--GNLDCGTGALDRL 495
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 142/288 (49%), Gaps = 4/288 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN-MAGR 143
KD P+ Y ++I+ LA+A + + + QR+ + YNV+ I+G +A
Sbjct: 179 KDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGI--TPSAVTYNVV-IHGMCLAYT 235
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+E M S C PS TFN++++ E + G D +
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC ++ A ++L++ K+ C+P V T +TL+HGLC+ G ++EA +L+ M S G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D VT+N L+ G + G+ E +LL M +G PN +Y ++ GL R PEA
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +M +P+ +Y LI G C+ V+ + +MV G P
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 463
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 148/301 (49%), Gaps = 12/301 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYG-N 139
++ +P+ Y ++I+ LA+A + + ++ Q++ G + + I+G
Sbjct: 4 RNVSPDSWSYGILIDGLAKAGKLNDARNLFQKL-------LHSGVTPSTVAYTSLIHGLC 56
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
MA A E DM C PS T+N++++ + E + + G D
Sbjct: 57 MANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV 116
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N ++ GLC++ +E A + +E + C PN R+++T++ GLC++ +++A + M
Sbjct: 117 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E++ I D+ ++ ILI GL K GK+ E KL +RM G P++ +Y V++G+
Sbjct: 177 EAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTL 236
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA EL M + PS ++ LI C + +++ +LK+M G VP + + +
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 296
Query: 380 V 380
+
Sbjct: 297 I 297
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 142/292 (48%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +++ L ++ R + E ++ ++E+L + +N I + +I +A
Sbjct: 113 PDVVTYNTVMDGLCKSSRVE--EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 170
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +M + + P ++ ++++ L A E ++ G+ A N+++ G+
Sbjct: 171 QVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGM 230
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C L+ A + + C P+ T++ L+ C++G ++EAF LL+RM +G D
Sbjct: 231 CLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDV 290
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ LISGL +V++ LLE M + C P + +++GL R EA+E++
Sbjct: 291 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 350
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ SP V+Y L+HG C E +L MV +G P + + +V
Sbjct: 351 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 402
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 2/298 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+R PN + II L Q + D + ++ + + D + Y ++ AG
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDI--PPDSWSYGILIDGLAKAG 199
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++++A + M PS T+N+V++ + A E ++ S G N
Sbjct: 200 KLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFN 259
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C+ G L+ AF +L P+V TYSTL+ GLC V++A LLE M
Sbjct: 260 ILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 319
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
VT N LI GL K G+++E ++L+ M G P+ +Y +++G + A
Sbjct: 320 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERA 379
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+EL+ M+ ++P+ V+Y L+ GLC + + V +M G P + + ++
Sbjct: 380 RELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 437
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 2/262 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y ++I+ + A D ++ + ++ K CR S F +N++ G++ +A
Sbjct: 217 TPSAVTYNVVIHGMCLAYTLDEALELFKSMR-SKGCRPSR-FTFNILIDAHCKRGKLDEA 274
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L M P V T++ +++ L S + + + K + N L+ G
Sbjct: 275 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G ++ A VLD P+V TY+TL+HG C G E A LL M + G+ +
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+ L+SGL K ++ E + +MK GC PN +Y ++ G + +L G
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454
Query: 328 RMICERMSPSFVSYKKLIHGLC 349
M+C +SP V Y L LC
Sbjct: 455 EMVCAGISPDHVVYGTLAAELC 476
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M N P ++ ++++ L A + + ++ GV L+ GLC +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A + + ++ C P+ TY+ ++ C++G +EEA L+++M +G D VT+N
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
++ GL K +VEE + L M+ GC PN S+ ++ GL + + +A ++ M +
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P SY LI GL + + + ++M+ G P
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITP 218
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 136/326 (41%), Gaps = 15/326 (4%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ K P+ + ++I+ + + D +++R+ DG +V+ ++G
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMT-------DDGHVPDVVTYSTLISG 299
Query: 143 -----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
R+ A L DM C P+V T N +++ L A E + + + G D
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+ G C G E A +L + + PNV TY+ L+ GLC+ + EA G+
Sbjct: 360 VVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFA 419
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+M+S G + T+ LI G G+V+ G+KL M G P+ Y + L
Sbjct: 420 QMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479
Query: 318 RFPEAKELV--GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
R A E++ GR + Y+ + GL +E ++ MV+ G +P
Sbjct: 480 RSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPER 539
Query: 376 WREIV-GCVTFGKDNRNRVYVTETVD 400
+V G G+ R + E +D
Sbjct: 540 CASLVAGLCKSGQGGEARAVLEEIMD 565
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 148/296 (50%), Gaps = 2/296 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R D PN + +I L + F+ + +++ ++ E C D Y I G
Sbjct: 244 RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS-EHGCT-PDIRMYATIIDGICKEGH 301
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A E L MPSY P+V +N VL L SA+ + E + + + + +D NI
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C+NG ++ +L++ C P+V TY+T+++G C++G ++EA LL+ M S G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+TV++ I++ GL G+ + +L+ +M +GC PN ++ ++ L K +A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EL+ +M+ SP +SY +I GL E+ +L MV +G P ++ I
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++ L A+R+ E+++ + +K C D F N++ + G + + I
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEM-FQKDCPLDDVTF-NILVDFFCQNGLVDRVI 376
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M S+ C P V T+ V+N L E + S + G + + I+LKGL
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G A ++ + +Q C PN T++TL++ LC+KG VE+A LL++M G D
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++++ +I GL K GK EE ++LL M KG PN+ Y + L + R + ++
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + V Y +I LC + + MV G +P + ++
Sbjct: 557 IKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 115/251 (45%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
Y+VI +G ++ L M + C NLVLN + E G+
Sbjct: 148 MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL 207
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
A G E D N +LKGLC ++DE + +C PN+ T++TL+ LC G
Sbjct: 208 AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLF 267
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E +L +M G D + +I G+ K+G +E ++L RM G PN Y V
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L GL +R+ EA+EL+ M + V++ L+ C LV+ V +L++M+ G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 370 VPRMGMWREIV 380
+P + + ++
Sbjct: 388 MPDVITYTTVI 398
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 35/265 (13%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A+ L + + C + ++N VL L AK +G+++ + ++ +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ LC NG E VL + + C P++R Y+T++ G+C++G++E A +L RM S
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 262 EGIDA-----------------------------------DTVTFNILISGLRKQGKVEE 286
G+ D VTFNIL+ + G V+
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
++LLE+M GC P+ +Y V+ G + EA L+ M P+ VSY ++
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
GLC+ D + ++ +M+QQG P
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPP 459
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++GLC G + A VLDE + C P Y ++ C G + +LE M ++G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
DT N++++ + +QG V+E + LL ++ GC + SY VL GL KR+ + +
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL+ M+ +P+ V++ LI LC L E V VL +M + G P + M+ I+
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + P+ Y+ +IN L +A +++A +++ ++ K C+ + + YN + AG
Sbjct: 36 KAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQA-KGCK-PNLWTYNTLVDCLGKAG 93
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ +A+ L +M C P V+T+N +++ L A E ++ + G D N
Sbjct: 94 QFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYN 153
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GL + G + A +L+E + C P+V TYS+L+ GL + G +AF L + M+
Sbjct: 154 SLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRR 213
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D++TF L+ L K G+V++ ++LL+ MK +G P +Y ++ G EA
Sbjct: 214 GRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEA 273
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ M P V+Y LI GL +++ VLKKM ++G P
Sbjct: 274 YNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPP 322
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 2/291 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q KR+ P+ +T +++ L +A R D +++ +K E+ + + +I +
Sbjct: 206 LFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK-ERGVKPGVVTYNALIAGF 264
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
G + G + +A L +M C P V T++ ++ L+ A E + K G D
Sbjct: 265 GKV-GDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPD 323
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+ GL + G L A + D + C P+V TYSTL+ L + VE A L E
Sbjct: 324 TITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFE 383
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
MES GI D T+ +I+ L K G+V++ +L M+GKG P+ +Y L L
Sbjct: 384 EMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGG 443
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
RF EA+++ M + P +Y L+ GL K V+D +LK++++QG
Sbjct: 444 RFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 159/348 (45%), Gaps = 53/348 (15%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E L++ + +RD V P+ Y +I+ L +A R + ++
Sbjct: 97 EALRLLAEMRDNGCV--------------PDVRTYNCLISTLGKAGRLSEAFTLFAEMR- 141
Query: 120 EKLCRFSDGFFYNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL----- 173
E+ C D F YN + IYG GR KA+E L +M + C P V T++ ++ L
Sbjct: 142 ERGC-VPDTFTYNSL-IYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGE 199
Query: 174 -VSA-KLYGEIQ---------------------GIYTSAAKL-------GVEIDACCLNI 203
V A KL+ E++ G A +L GV+ N
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G + G+L A+ +LDE + C+P+V TYS L+ GL + ++EA +L++ME EG
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
DT+T+N LI+GL K G + + +L +RMK KGC P+ +Y ++ L R A
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESAC 379
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L M + P +Y +I L V+D D + +M +G P
Sbjct: 380 VLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSP 427
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 93/188 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V T+N +LN L A E Q ++ D + L+ L G EAA V
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ E + C+PN+ TY+TL+ L + G +EA LL M G D T+N LIS L K
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G++ E L M+ +GC P++ +Y ++YGL R +A EL+ M P ++
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 341 YKKLIHGL 348
Y LI GL
Sbjct: 187 YSSLITGL 194
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 132/300 (44%), Gaps = 39/300 (13%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y ++N LA+A + + + + + +K K D Y+ + AG+ A
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWT--PDVVSYSCLINSLGRAGKWEAA 63
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E + +M + C P++ T+N +++ L A
Sbjct: 64 LEVVAEMQAKGCKPNLWTYNTLVDCLGKA------------------------------- 92
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
G + A +L E C P+VRTY+ L+ L + G + EAF L M G D
Sbjct: 93 ----GQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPD 148
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T T+N LI GL K G+ ++ M+LLE M+ GC P+ +Y ++ GL +A +L
Sbjct: 149 TFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQ 208
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
M P +++ L+ L V+D +L +M ++G P + + ++ FGK
Sbjct: 209 EMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALI--AGFGK 266
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 138/318 (43%), Gaps = 12/318 (3%)
Query: 38 ASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYS------KRKDYNPNE 91
AS D K K+ P + ++ L + + +LN K K NP+
Sbjct: 302 ASQLDEACQVLKKMEKEGCPPDTI--TYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDV 359
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY-NVIKIYGNMAGRISKAIET 150
Y+ +I L +A R ++ + + ++E + D F Y ++I + G AG++ A
Sbjct: 360 VTYSTLITALGKAARVESACVLFE--EMESVGIQPDLFTYCSIITVLGK-AGQVDDADRL 416
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
+M P V T+N LN L + E + I+ + G+ D + LL GL +
Sbjct: 417 FSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSK 476
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
++ A +L E +Q C + + + L GNV+EA LL+ S+G+ +
Sbjct: 477 TKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASS 536
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+N LI L K G+V E LE +K +G P+ SY ++ L + A EL+ M
Sbjct: 537 YNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMS 596
Query: 331 CERMSPSFVSYKKLIHGL 348
+ S SY L+ L
Sbjct: 597 KRGLKLSPRSYSNLVRKL 614
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 123/281 (43%), Gaps = 2/281 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +IN L +A + + R+K K C D Y+ + A R+ A
Sbjct: 322 PDTITYNTLINGLGKAGLLNDAGRLFDRMK-SKGCN-PDVVTYSTLITALGKAARVESAC 379
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M S P + T+ ++ +L A + +++ G+ D N L L
Sbjct: 380 VLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSL 439
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
G + A + ++ + P+V TY L+ GL + V++A GLL+ + +G D+
Sbjct: 440 GRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDS 499
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ F+ + L G V+E +LL+ KG +P ++SY ++ L R EA +
Sbjct: 500 LKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLED 559
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ + P VSY LI L ++ +L++M ++G
Sbjct: 560 LKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGL 600
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 139/316 (43%), Gaps = 3/316 (0%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
F + D + ++L++ KR P+ Y+ +I L +A + D +++ K+EK
Sbjct: 264 FGKVGDLVEAYNLLDEM-KRNGCKPDVVTYSCLITGLIKASQLDEACQVLK--KMEKEGC 320
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
D YN + AG ++ A M S C P V T++ ++ L A
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACV 380
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
++ +G++ D ++ L + G ++ A + E + P+V TY+ ++ L
Sbjct: 381 LFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLG 440
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
G +EA + E M+ G+ D T++ L+ GL K +V++ LL+ + +GC +S
Sbjct: 441 RGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSL 500
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+ E L L EA EL+ + + P SY LI L V + L+ +
Sbjct: 501 KFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDL 560
Query: 365 VQQGFVPRMGMWREIV 380
+QG P + + ++
Sbjct: 561 KEQGGKPDIVSYSSLI 576
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 14/235 (5%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYN------------PNEALYTLIINKLAQAKRF 107
E + I +L S+I+VL + + D + P+ Y +N L + RF
Sbjct: 386 ESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRF 445
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
I + +K L D Y+ + + + + A L ++ C F+
Sbjct: 446 KEARKIFEDMKESGL--LPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFD 503
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
L +L S E + A G+ A N L+ L + G + AF L++ +Q
Sbjct: 504 ECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQ 563
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
+P++ +YS+L+ L + G ++ AF LLE M G+ +++ L+ L+ G
Sbjct: 564 GGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 152/317 (47%), Gaps = 3/317 (0%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
+LSP V I N +P S K + E+ LI + L + +
Sbjct: 56 FLSPKIVTSIIQNPPNPQLGFRFFIWASNFKRFRAWESC-DLITDLLINQNGLELYCQTL 114
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ +K + +D FF +IK+Y M G KA+ET M ++C P V T+N++L++L+
Sbjct: 115 EALKNGGIKVHNDAFFV-LIKVYLKM-GLTDKAMETFGSMRDFDCTPDVYTYNMILDVLI 172
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
+YT KL + +IL+ GLC++GN++ A ++ DE ++ P+
Sbjct: 173 QKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAF 232
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TY ++ GLC V++A+ L ++M+ G+ D VT N L++G +V+E LL
Sbjct: 233 TYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLF 292
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+ G + Y ++ GL KR+ + + L +MI + + P Y ++ GL V
Sbjct: 293 EKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKV 352
Query: 355 EDVDWVLKKMVQQGFVP 371
D +L +M + G VP
Sbjct: 353 RDALELLNEMTESGVVP 369
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 139/287 (48%), Gaps = 54/287 (18%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRISK 146
P+ LYT+++ LA+A + DA+E + + + + D YNV IK + +M G +S+
Sbjct: 334 PDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVV---PDTVCYNVLIKGFCDM-GLLSE 389
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A ++ ++C+P+VKT++++++ + L + Q I+ KLG A N L+
Sbjct: 390 ARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLID 449
Query: 207 GLCENGNLEAA---FY--------------------VLD-----EFPKQNCE-------- 230
GLC+ G LE A FY VLD + +Q C+
Sbjct: 450 GLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAY 509
Query: 231 ------------PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
P + TY+ L++G C+ GN A+ L M+ +G+ DTVT+ LI+GL
Sbjct: 510 RILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGL 569
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ + E+ K+ ++M+ GC P++A Y+ ++ + + P A L
Sbjct: 570 LRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSL 616
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 138/300 (46%), Gaps = 15/300 (5%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ +I L +AKR++ ++ ++ R +E + D + Y ++ AG++ A+E L +
Sbjct: 304 YSCLIRGLFRAKRYEDVQ-LLYRKMIEDNVK-PDVYLYTIMMKGLAEAGKVRDALELLNE 361
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P +N+++ L E + + ++ + +IL+ G+C NG
Sbjct: 362 MTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGL 421
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-----------SE 262
A + +E K C P+ T+++L+ GLC+ G +E+A L +ME S+
Sbjct: 422 TRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQ 481
Query: 263 GID--ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G D+ + ++ L G + + ++L ++ G P +Y ++ G F
Sbjct: 482 GPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFN 541
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +L M + +SP V+Y LI+GL + ED V +M + G P ++R ++
Sbjct: 542 GAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMM 601
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + A+ +M P T+ +V++ L +K + ++ GV D
Sbjct: 209 SGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVT 268
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N LL G C ++ AF +L F K +VR YS L+ GL E+ L +M
Sbjct: 269 CNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMI 328
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ + D + I++ GL + GKV + ++LL M G P++ Y ++ G D
Sbjct: 329 EDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLS 388
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA+ L + P+ +Y LI G+C L D + +M + G P
Sbjct: 389 EARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYP 439
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 120/293 (40%), Gaps = 4/293 (1%)
Query: 74 VISVLNQYSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
++ L Y++ N PN A ++++I+ L ++ + + + D F Y
Sbjct: 177 LLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGI--LPDAFTY 234
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
V+ + R+ A M P T N +LN E + K
Sbjct: 235 CVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEK 294
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G +D + L++GL E + + + N +P+V Y+ +M GL E G V +
Sbjct: 295 DGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRD 354
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A LL M G+ DTV +N+LI G G + E L + C+PN +Y ++
Sbjct: 355 ALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILIS 414
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
G+ +A+E+ M PS V++ LI GLC +E + KM
Sbjct: 415 GMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM 467
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 4/317 (1%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
F + D + ++ + ++R Y PN Y I++ L ++ D+ + + ++ C
Sbjct: 159 FCRVGDLDGAVELVRKMTERG-YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCP 217
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
D F Y+ I +G++ A + M S C P+V T++ +L+ L A E
Sbjct: 218 -PDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATA 276
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ + G + N ++ G C+ G ++ A+++L+E C+PNV TY+ L+ C
Sbjct: 277 LLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFC 336
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ G E+A GL+E M +G + T+N L+ K+ +VE +LL M KGC PN
Sbjct: 337 KCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVV 396
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
SY V+ GL + E L+ +M+ P V++ +I +C V D+ + L +
Sbjct: 397 SYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV-DIAYELFNL 455
Query: 365 VQQ-GFVPRMGMWREIV 380
+Q+ G P + + +V
Sbjct: 456 IQESGCTPNLVTYNSLV 472
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 140/299 (46%), Gaps = 3/299 (1%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+VL+ K P+ Y +IN L+++ R D +++ + + F YN +
Sbjct: 29 AVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA--PNVFSYNTVL 86
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
A R+ A+ L M C P V ++ V+N L E + + G +
Sbjct: 87 HGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQ 146
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+ L+ G C G+L+ A ++ + ++ PN TY+ +MHGLC ++ A L
Sbjct: 147 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQL 206
Query: 256 LERMESEG-IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ ME G D T++ ++ L K GKV++ +L+E M KGC PN +Y +L+GL
Sbjct: 207 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLC 266
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ EA L+ RM SP+ V+Y +I G C +++ +L++MV G P +
Sbjct: 267 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNV 325
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 139/288 (48%), Gaps = 3/288 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +PN Y+ +++ L +A + D ++QR+ C + YN I GRI
Sbjct: 249 KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM-TRSGCS-PNIVTYNTIIDGHCKLGRI 306
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A L +M C P+V T+ ++L+ + G+ + G + N L
Sbjct: 307 DEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSL 366
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L C+ +E A +L ++ C PNV +Y+T++ GLC+ V E LLE+M S
Sbjct: 367 LDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNC 426
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VTFN +I + K +V+ +L ++ GC PN +Y +++GL +RF +A+
Sbjct: 427 VPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEY 486
Query: 325 LVGRMICER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ M ++ SP ++Y +I GLC K V+ + +M+ G P
Sbjct: 487 LLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 534
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 151/319 (47%), Gaps = 5/319 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK + ++ I+ L A + + ++ ++ K C D YN + + + R
Sbjct: 3 RKGLKAHAGVHKSILRGLCDAGQCS--DAVLHFREMSKTCP-PDSVTYNTMINGLSKSDR 59
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ AI L +M P+V ++N VL+ A + G D
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ GLC+ ++ A V+D+ ++ C+PNV TY TL+ G C G+++ A L+ +M G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG-CYPNSASYQEVLYGLLDKKRFPEA 322
+ +T+N ++ GL K++ ++L + M+ G C P+ +Y ++ L+ + +A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-G 381
LV M+ + SP+ V+Y L+HGLC +++ +L++M + G P + + I+ G
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299
Query: 382 CVTFGKDNRNRVYVTETVD 400
G+ + + E VD
Sbjct: 300 HCKLGRIDEAYHLLEEMVD 318
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 155/350 (44%), Gaps = 46/350 (13%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--VEKLCRFSD 127
D I ++ V+ + K Y PN Y +++ + D +E Q + ++K C +
Sbjct: 343 DAIGLVEVMVE----KGYVPNLFTYNSLLDMFCKK---DEVERACQLLSSMIQKGC-VPN 394
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
YN + A ++ + + L M S NC P + TFN +++ + ++
Sbjct: 395 VVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN 454
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP-KQNCEPNVRTYSTLMHGLCEK 246
+ G + N L+ GLC++ + A Y+L E KQ C P++ TY+T++ GLC+
Sbjct: 455 LIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKS 514
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILIS------------------------------ 276
V+ A+ L +M S+G+ D VT++I+IS
Sbjct: 515 KRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITY 574
Query: 277 -----GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
G K G +++ +++L+ + KG YP+ ++ + L + R +A EL+ M+
Sbjct: 575 GTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLR 634
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ P V+Y L+ G C+ ED + + M Q G P + +VG
Sbjct: 635 AGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVG 684
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 134/291 (46%), Gaps = 20/291 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + II+ + + R D ++ I+ G N++ Y ++ + K+
Sbjct: 428 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQ-------ESGCTPNLVT-YNSLVHGLCKSR 479
Query: 149 ETLFDMPSY---------NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
FD Y C P + T+N V++ L +K ++ G+ D
Sbjct: 480 R--FDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 537
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+I++ LC+ ++ A VL+ K +P TY TL+ G C+ GN+++A +L+ +
Sbjct: 538 TYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLL 597
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S+G D VTF+I I L K+G++ + +LLE M G P++ +Y +L G D R
Sbjct: 598 LSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRT 657
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED-VDWVLKKMVQQGF 369
+A +L M P +Y L+ L ++K +D + V K MV GF
Sbjct: 658 EDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGF 708
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 148/296 (50%), Gaps = 2/296 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R D PN + +I L + F+ + +++ ++ E C D Y I G
Sbjct: 244 RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS-EHGCT-PDIRMYATIIDGICKEGH 301
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A E L MPSY P+V +N VL L SA+ + E + + + + +D NI
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C+NG ++ +L++ C P+V TY+T+++G C++G ++EA LL+ M S G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+TV++ I++ GL G+ + +L+ +M +GC PN ++ ++ L K +A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EL+ +M+ SP +SY +I GL E+ +L MV +G P ++ I
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++ L A+R+ E+++ + +K C D F N++ + G + + I
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEM-FQKDCPLDDVTF-NILVDFFCQNGLVDRVI 376
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M S+ C P V T+ V+N L E + S + G + + I+LKGL
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G A ++ + +Q C PN T++TL++ LC+KG VE+A LL++M G D
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++++ +I GL K GK EE ++LL M KG PN+ Y + L + R + ++
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + V Y +I LC + + MV G +P
Sbjct: 557 IKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 35/265 (13%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A+ L + + C + ++N VL L AK +G+++ + ++ +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ LC NG E VL + + C P++R Y+T++ G+C++G++E A +L RM S
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 262 EGIDA-----------------------------------DTVTFNILISGLRKQGKVEE 286
G+ D VTFNIL+ + G V+
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
++LLE+M GC P+ +Y V+ G + EA L+ M P+ VSY ++
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
GLC+ D + ++ +M+QQG P
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPP 459
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 115/251 (45%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
Y+VI +G ++ L M + C NLVLN + E G+
Sbjct: 148 MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL 207
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
A G E D N +LKGLC ++DE + +C PN+ T++TL+ LC G
Sbjct: 208 AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLF 267
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E +L +M G D + +I G+ K+G +E ++L RM G PN Y V
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L GL +R+ EA+EL+ M + V++ L+ C LV+ V +L++M+ G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 370 VPRMGMWREIV 380
+P + + ++
Sbjct: 388 MPDVITYTTVI 398
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++GLC G + A VLDE + C P Y ++ C G + +LE M ++G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
DT N++++ + +QG V+E + LL ++ GC + SY VL GL KR+ + +
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL+ M+ +P+ V++ LI LC L E V VL +M + G P + M+ I+
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
>gi|255564122|ref|XP_002523058.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537620|gb|EEF39243.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 286
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 144/277 (51%), Gaps = 14/277 (5%)
Query: 56 LSPTEVLKIFSNLRD----PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIE 111
++P++V ++ +D + S +YS + + + ++ II+KL A +F +E
Sbjct: 13 ITPSQVEQVIRAEKDIEKAKLVFDSATAEYSH--GFKHDNSTFSAIISKLLSANQFTLVE 70
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
D++ R+K EK C ++ F ++ + YG + R +I M + C + K++ V
Sbjct: 71 DMLNRMKQEK-CNITEDIFLSICRAYGRV-HRPLDSIRVFHKMKDFECKATQKSYITVFA 128
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN-LEAAFYVLDEFPKQNCE 230
+LV + Y ++G+ LN+L+K LC+N + ++AAF + +E P + C
Sbjct: 129 ILVEENRLKDAMRFYQHMREMGISASVVSLNVLIKALCKNSSTIDAAFRIFNEMPNRGCN 188
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P+ TY TL++GLC G + EA L ME++ VT++ LI G + + ++L
Sbjct: 189 PDSYTYGTLINGLCRFGKIWEAKELFIEMETKCCSPSVVTYSCLI-----HGDLHKAIRL 243
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++ M GC P+ ++ VL G LD+++ EA EL+
Sbjct: 244 VDEMVLDGCVPDQLTWTVVLCGFLDRRKVWEASELLA 280
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
F+ + +F C+ ++Y T+ L E+ +++A + M GI A V+ N+LI
Sbjct: 108 FHKMKDF---ECKATQKSYITVFAILVEENRLKDAMRFYQHMREMGISASVVSLNVLIKA 164
Query: 278 L-RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
L + ++ ++ M +GC P+S +Y ++ GL + EAKEL M + SP
Sbjct: 165 LCKNSSTIDAAFRIFNEMPNRGCNPDSYTYGTLINGLCRFGKIWEAKELFIEMETKCCSP 224
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVY 394
S V+Y LIHG + K + VD +MV G VP W +V C G +R +V+
Sbjct: 225 SVVTYSCLIHGDLH-KAIRLVD----EMVLDGCVPDQLTW-TVVLC---GFLDRRKVW 273
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+RK PN+ Y II+ L + R E +++ +K +++ F D Y + +G
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRI--FPDNVVYTTLISGFGKSG 371
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+S + +M P T+ +++ L A E + +++ G++ D
Sbjct: 372 NVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYT 431
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G ++ AF + ++ ++ PNV TY+ L+ GLC+ G V+ A LL M +
Sbjct: 432 ALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEK 491
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + T+N LI+GL K G +E+ +KL+E M G +P++ +Y ++ +A
Sbjct: 492 GLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKA 551
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EL+ M+ + + P+ V++ L++G C ++ED + ++K M+ +G +P
Sbjct: 552 HELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMP 600
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 132/282 (46%), Gaps = 2/282 (0%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N Y +I++ L Q + ++ I++E D Y+VI ++ K ++
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLL--IQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLK 308
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+ ++ P+ T+N +++ L E + + + D L+ G
Sbjct: 309 LMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFG 368
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
++GN+ + + DE ++ P+ TY++++HGLC+ G V EA L M S+G+ D V
Sbjct: 369 KSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEV 428
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+ LI G K G+++E L +M KG PN +Y ++ GL A EL+ M
Sbjct: 429 TYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEM 488
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + P+ +Y LI+GLC +E ++++M GF P
Sbjct: 489 SEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFP 530
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 1/222 (0%)
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
CW +V ++N++L+LL E + G D ++++ G C+ L
Sbjct: 249 CWNTV-SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVL 307
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+++E ++ +PN TY++++ LC+ G V EA +L M+++ I D V + LISG
Sbjct: 308 KLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGF 367
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G V KL + MK K P+ +Y +++GL + EA++L M+ + + P
Sbjct: 368 GKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDE 427
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+Y LI G C +++ + +MV++G P + + +V
Sbjct: 428 VTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALV 469
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 142/298 (47%), Gaps = 2/298 (0%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+SV L KRK P+ YT +I+ L QA + + + + K + + +
Sbjct: 373 VSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM-LSKGLKPDEVTYT 431
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+I Y AG + +A M P+V T+ +++ L + ++
Sbjct: 432 ALIDGYCK-AGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G++ + C N L+ GLC+ GN+E A +++E P+ TY+T+M C+ G + +
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAK 550
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A LL M +G+ VTFN+L++G G +E+G +L++ M KG PN+ ++ ++
Sbjct: 551 AHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMK 610
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ E+ M + + P +Y LI G C + +++ ++ K+MV++GF
Sbjct: 611 QYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGF 668
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 120/250 (48%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN+I G++ +A L M P V +++++++ + G++ +
Sbjct: 255 YNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQ 314
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ G++ + N ++ LC+ G + A VL Q P+ Y+TL+ G + GNV
Sbjct: 315 RKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVS 374
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+ L + M+ + I D VT+ +I GL + GKV E KL M KG P+ +Y ++
Sbjct: 375 VEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALI 434
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
G EA L +M+ + ++P+ V+Y L+ GLC V+ + +L +M ++G
Sbjct: 435 DGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQ 494
Query: 371 PRMGMWREIV 380
P + + ++
Sbjct: 495 PNVCTYNALI 504
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 114/228 (50%), Gaps = 12/228 (5%)
Query: 151 LFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS------AAKLGVEIDACCLNI 203
LFD + +Y SV + NL L A+L GI T+ +++GV + NI
Sbjct: 203 LFDKLLNYGVLVSVDSCNLFL-----ARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNI 257
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L LC+ G ++ A +L + + P+V +YS ++ G C+ + + L+E ++ +G
Sbjct: 258 ILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKG 317
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + T+N +IS L K G+V E ++L MK + +P++ Y ++ G
Sbjct: 318 LKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEY 377
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L M +++ P FV+Y +IHGLC V + + +M+ +G P
Sbjct: 378 KLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKP 425
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 10/249 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL----CRFSDGFFYNVIKIYGNM 140
K PN YT +++ L + D +++ + + L C + + + K+
Sbjct: 456 KGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTY-NALINGLCKV---- 510
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G I +A++ + +M +P T+ +++ + + G++
Sbjct: 511 -GNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVT 569
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ G C +G LE ++ + PN T+++LM C + N+ + + M
Sbjct: 570 FNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMH 629
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++G+ DT T+NILI G K ++E L + M KG +ASY ++ G +K+F
Sbjct: 630 AQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFE 689
Query: 321 EAKELVGRM 329
EA++L M
Sbjct: 690 EARKLFEEM 698
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 37/243 (15%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN Y +IN L + + +M+ + + F D Y I G +
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGF--FPDTITYTTIMDAYCKMGEM 548
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLN----------------------LLVSAKLYGEI 182
+KA E L M P++ TFN+++N ++ +A + +
Sbjct: 549 AKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSL 608
Query: 183 QG-------------IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
IY GV D NIL+KG C+ N++ A+++ E ++
Sbjct: 609 MKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGF 668
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+Y++L+ G ++ EEA L E M + G A+ ++I + ++G E ++
Sbjct: 669 SLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLE 728
Query: 290 LLE 292
L +
Sbjct: 729 LCD 731
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 140/301 (46%), Gaps = 21/301 (6%)
Query: 88 NPNEALYTLIINKLAQAKR----FDAIEDIMQR--IKVEKL--CRFSDGFFYNVIKIYGN 139
PN + II+ L ++ R F +D+ + + +K+ C DG F
Sbjct: 462 TPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRT------- 514
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
GR +A L MP P FN +N L +Y +L + D
Sbjct: 515 --GRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKV 568
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NIL+ G C+ GN E A + +E +N +P+V T+ L+ GLC+ G VE A +L+ M
Sbjct: 569 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM 628
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ G+ + VT+N L+ GL K G++EE + LE M GC P+S +Y ++Y L R
Sbjct: 629 GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRT 688
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+A +LV + P V+Y L+ GL E VL++MV +G P + + +
Sbjct: 689 DDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTL 748
Query: 380 V 380
+
Sbjct: 749 I 749
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 141/284 (49%), Gaps = 7/284 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ + IN L++ + R+ +L D +N++ AG +A
Sbjct: 529 DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELEL--VPDKVTFNILIAGACKAGNFEQA 586
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M + N P V TF +++ L A + I LGV + N L+ G
Sbjct: 587 SALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHG 646
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC++G +E A L+E C P+ TY +L++ LC ++A L+ ++S G D D
Sbjct: 647 LCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPD 706
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TVT+NIL+ GL K G+ E+ + +LE M GKG +P+ +Y ++ L EA+ L G
Sbjct: 707 TVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHG 766
Query: 328 RMICERMS----PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
M R+S P+ V+Y LI+GLC +++ ++++M+++
Sbjct: 767 DM-SSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK 809
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 147/303 (48%), Gaps = 17/303 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRI-KVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y ++ L +A R D D +Q + +++ D YN++ +G+ +A
Sbjct: 670 PDSITYGSLVYALCRASRTD---DALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQA 726
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL------ 201
I L +M P V T+N +++ L A G+++ + + CC+
Sbjct: 727 ITVLEEMVGKGHHPDVVTYNTLIDSLCKA---GDLEEARRLHGDMSSRVSRCCVPNVVTY 783
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCE--PNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
++L+ GLC+ G ++ A ++ E +++C+ PN+ TY++ + GLC++ + EA L+ +
Sbjct: 784 SVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSL 843
Query: 260 E--SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
S + DTVTF+ LI GL K G+ +E + + M G PN +Y ++ GL
Sbjct: 844 RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTD 903
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+ A ++ M+ + ++P ++Y L+ C V++ +L M +G P + +
Sbjct: 904 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFN 963
Query: 378 EIV 380
I+
Sbjct: 964 SII 966
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 136/283 (48%), Gaps = 13/283 (4%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIE----DIMQRIKVEKLCRFSDGFF 130
I+VL + K ++P+ Y +I+ L +A + D+ R+ C +
Sbjct: 727 ITVLEEMVG-KGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVS---RCCVPNVVT 782
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNC--WPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
Y+V+ GRI +A E + +M +C P++ T+N L+ L + E + S
Sbjct: 783 YSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRS 842
Query: 189 A--AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
L V D + L+ GLC+ G + A V D+ PNV TY+ LM+GLC+
Sbjct: 843 LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKT 902
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+E A ++E M +G+ D +T+++L+ K V+E ++LL M +GC PN ++
Sbjct: 903 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTF 962
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICER-MSPSFVSYKKLIHGL 348
++ GL + EA ++ M + ++P ++Y LI GL
Sbjct: 963 NSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGL 1005
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 138/305 (45%), Gaps = 42/305 (13%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDA----IEDIMQR----------IKVEKLCRFSDGF 129
R P Y IIN L ++ A E++++R ++ LC+ D
Sbjct: 209 RDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD-- 266
Query: 130 FYNVIKIYGNMA---------------------GRISKAIETLFDMPSYNC--WPSVKTF 166
+++G+M+ GRI +A E + +M +C P++ T+
Sbjct: 267 LEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 326
Query: 167 NLVLNLLVSAKLYGEIQGIYTSA--AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
N L+ L + E + S L V D + L+ GLC+ G ++ A V D+
Sbjct: 327 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDM 386
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
PNV TY+ L++GLC+ +E A ++E M +G+ D +T+++L+ K +V
Sbjct: 387 IAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 446
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER-MSPSFVSYKK 343
+E ++LL M +GC PN ++ ++ GL R EA ++ M + + P ++Y
Sbjct: 447 DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCT 506
Query: 344 LIHGL 348
LI GL
Sbjct: 507 LIDGL 511
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 131 YNVIKIYGNMAGRISKAIETL-FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN++ AG ++A+E +M P++ T+N ++N L + G ++
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ G D N L+ LC+ G+LE A + + ++C PNV TYS L++GLC+ G +
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302
Query: 250 EEAFGLLERMESEGIDA---------------------------------------DTVT 270
+EA L++ M + D DTVT
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 362
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
F+ LI GL K G+++E + + M G PN +Y ++ GL + A ++ M+
Sbjct: 363 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 422
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++P ++Y L+ C V++ +L M +G P + + I+
Sbjct: 423 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 472
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 132/319 (41%), Gaps = 41/319 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-----R 143
PN Y+++IN L + R D +++Q ++ R S N+I + G
Sbjct: 778 PNVVTYSVLINGLCKVGRIDEARELIQ-----EMMRKSCDVLPNIITYNSFLDGLCKQSM 832
Query: 144 ISKAIETLFDM--PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+++A E + + S P TF+ +++ L E ++ G +
Sbjct: 833 MAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTY 892
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+L+ GLC+ +E A +++ + P+V TYS L+ C+ +V+EA LL M S
Sbjct: 893 NVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMAS 952
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-GCYPNSASYQEVLYGL------- 313
G + VTFN +I GL K + E ++ + M K G P+ +Y ++ GL
Sbjct: 953 RGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAG 1012
Query: 314 -----LDKKRFPEA----------------KELVGRMICERMSPSFVSYKKLIHGLCNQK 352
LD P+ + RM+ + P V++ LI G C
Sbjct: 1013 QAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAG 1072
Query: 353 LVEDVDWVLKKMVQQGFVP 371
E + ++MV + P
Sbjct: 1073 NFEQASALFEEMVAKNLQP 1091
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 10/228 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN Y +++N L + + + +++ + + + D Y+V+ A + +
Sbjct: 885 YVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGV--TPDVITYSVLVDAFCKASHVDE 942
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA-KLGVEIDACCLNILL 205
A+E L M S C P+V TFN +++ L + GE ++ K G+ D L+
Sbjct: 943 ALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLI 1002
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GL G A +LD P +P+ ++ ++GL + G+V A L RM +
Sbjct: 1003 DGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDVSRA---LHRMLELELV 1055
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
D VTFNILI+G K G E+ L E M K P+ ++ ++ GL
Sbjct: 1056 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 1103
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 107/265 (40%), Gaps = 15/265 (5%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG-------IYTSAAKL-GVE 195
IS+A+E+L P + +++ L+ V+A + ++ G Y AA L G +
Sbjct: 51 ISEALESL--RPGQSVVAALRGCKGRLHPSVAAAILAQLDGNAELGTQFYDWAAALPGFK 108
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG-NVEEAFG 254
N L L ++G+ A + C PN TYSTL+ + G +VE G
Sbjct: 109 HTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLG 168
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE-RMKGKGCYPNSASYQEVLYGL 313
R+ S +NI++ L + G+ +++ M G P +Y ++ GL
Sbjct: 169 FFRRIRSS--SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGL 226
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EL ++ P V+Y LI LC +E+ + M + VP +
Sbjct: 227 CKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNV 286
Query: 374 GMWREIV-GCVTFGKDNRNRVYVTE 397
+ ++ G G+ + R + E
Sbjct: 287 VTYSVLINGLCKVGRIDEARELIQE 311
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 148/296 (50%), Gaps = 2/296 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R D PN + +I L + F+ + +++ ++ E C D Y I G
Sbjct: 244 RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS-EHGCT-PDIRMYATIIDGICKEGH 301
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A E L MPSY P+V +N VL L SA+ + E + + + + +D NI
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C+NG ++ +L++ C P+V TY+T+++G C++G ++EA LL+ M S G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+TV++ I++ GL G+ + +L+ +M +GC PN ++ ++ L K +A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EL+ +M+ SP +SY +I GL E+ +L MV +G P ++ I
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++ L A+R+ E+++ + +K C D F N++ + G + + I
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEM-FQKDCPLDDVTF-NILVDFFCQNGLVDRVI 376
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M S+ C P V T+ V+N L E + S + G + + I+LKGL
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G A ++ + +Q C PN T++TL++ LC+KG VE+A LL++M G D
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++++ +I GL K GK EE ++LL M KG PN+ Y + L + R + ++
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + V Y +I LC + + MV G +P
Sbjct: 557 IKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 35/265 (13%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A+ L + + C + ++N VL L AK +G+++ + ++ +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ LC NG E VL + + C P++R Y+T++ G+C++G++E A +L RM S
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 262 EGIDA-----------------------------------DTVTFNILISGLRKQGKVEE 286
G+ D VTFNIL+ + G V+
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
++LLE+M GC P+ +Y V+ G + EA L+ M P+ VSY ++
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
GLC+ D + ++ +M+QQG P
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPP 459
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 115/251 (45%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
Y+VI +G ++ L M + C NLVLN + E G+
Sbjct: 148 MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL 207
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
A G E D N +LKGLC ++DE + +C PN+ T++TL+ LC G
Sbjct: 208 AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLF 267
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E +L +M G D + +I G+ K+G +E ++L RM G PN Y V
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L GL +R+ EA+EL+ M + V++ L+ C LV+ V +L++M+ G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 370 VPRMGMWREIV 380
+P + + ++
Sbjct: 388 MPDVITYTTVI 398
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++GLC G + A VLDE + C P Y ++ C G + +LE M ++G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
DT N++++ + +QG V+E + LL ++ GC + SY VL GL KR+ + +
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL+ M+ +P+ V++ LI LC L E V VL +M + G P + M+ I+
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 148/296 (50%), Gaps = 2/296 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R D PN + +I L + F+ + +++ ++ E C D Y I G
Sbjct: 244 RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS-EHGCT-PDIRMYATIIDGICKEGH 301
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A E L MPSY P+V +N VL L SA+ + E + + + + +D NI
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C+NG ++ +L++ C P+V TY+T+++G C++G ++EA LL+ M S G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+TV++ I++ GL G+ + +L+ +M +GC PN ++ ++ L K +A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EL+ +M+ SP +SY +I GL E+ +L MV +G P ++ I
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++ L A+R+ E+++ + +K C D F N++ + G + + I
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEM-FQKDCPLDDVTF-NILVDFFCQNGLVDRVI 376
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M S+ C P V T+ V+N L E + S + G + + I+LKGL
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G A ++ + +Q C PN T++TL++ LC+KG VE+A LL++M G D
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++++ +I GL K GK EE ++LL M KG PN+ Y + L + R + ++
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + V Y +I LC + + MV G +P
Sbjct: 557 IKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 35/265 (13%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A+ L + + C + ++N VL L AK +G+++ + ++ +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ LC NG E VL + + C P++R Y+T++ G+C++G++E A +L RM S
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 262 EGIDA-----------------------------------DTVTFNILISGLRKQGKVEE 286
G+ D VTFNIL+ + G V+
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
++LLE+M GC P+ +Y V+ G + EA L+ M P+ VSY ++
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
GLC+ D + ++ +M+QQG P
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPP 459
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 115/251 (45%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
Y+VI +G ++ L M + C NLVLN + E G+
Sbjct: 148 MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL 207
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
A G E D N +LKGLC ++DE + +C PN+ T++TL+ LC G
Sbjct: 208 AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLF 267
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E +L +M G D + +I G+ K+G +E ++L RM G PN Y V
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L GL +R+ EA+EL+ M + V++ L+ C LV+ V +L++M+ G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 370 VPRMGMWREIV 380
+P + + ++
Sbjct: 388 MPDVITYTTVI 398
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++GLC G + A VLDE + C P Y ++ C G + +LE M ++G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
DT N++++ + +QG V+E + LL ++ GC + SY VL GL KR+ + +
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL+ M+ +P+ V++ LI LC L E V VL +M + G P + M+ I+
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 151/291 (51%), Gaps = 8/291 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIM-QRIKV-EKLCRFSDGFFYNVIKIYGNMAGRISK 146
P+ Y ++ L AKR+D +E++M + ++V E L + + +++Y + I K
Sbjct: 211 PDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICK 270
Query: 147 ------AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A + L MPSY P+V +N VL L SA+ + E + + + +D
Sbjct: 271 DGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVT 330
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C+NG ++ +L++ + C P+V TY+T+++G C++G V+EA LL+ M
Sbjct: 331 FNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 390
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G +T+++ I++ GL + + + +L+ M +GC PN ++ ++ + K
Sbjct: 391 ACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAE 450
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A EL+ +M+ SP +SY +I GL E+ +L M+ +G P
Sbjct: 451 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITP 501
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 132/284 (46%), Gaps = 45/284 (15%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL--------- 192
G + + +E L +PS+ C P + ++N VL L AK + +++ + ++
Sbjct: 192 GCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPE 251
Query: 193 -GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G D ++ G+C++G+ E A +L P +PNV Y+T++ GLC EE
Sbjct: 252 HGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEE 311
Query: 252 AFGLLERMESEGIDADTVTFNIL-----------------------------------IS 276
A LL M E D VTFNIL I+
Sbjct: 312 AEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVIN 371
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G K+G V+E + LL+ M GC PN+ SY VL GL +R+ +A+EL+ MI + P
Sbjct: 372 GFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLP 431
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ V++ LI+ +C + L E +LK+M+ G P + + ++
Sbjct: 432 NPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVI 475
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 130/283 (45%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++ L A+R++ ED++ + E C D F N++ + G + + I
Sbjct: 291 PNVVCYNTVLKGLCSAERWEEAEDLLAEMFQED-CPLDDVTF-NILVDFFCQNGLVDRVI 348
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M + C P V T+ V+N L E + + + G + + I+LKGL
Sbjct: 349 ELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGL 408
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C A ++ +Q C PN T++TL++ +C+KG E+A LL++M G D
Sbjct: 409 CRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDL 468
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++++ +I GL K GK EE ++LL M KG PN+ Y + L + R + ++
Sbjct: 469 ISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDS 528
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + Y +I LC + + MV G +P
Sbjct: 529 IQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 571
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 108/276 (39%), Gaps = 45/276 (16%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G A+ L + + C NLV++ + E + G E D
Sbjct: 156 GGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVS 215
Query: 201 LNILLKGL---------------------------------------------CENGNLE 215
N +LKGL C++G+ E
Sbjct: 216 YNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHE 275
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A +L P +PNV Y+T++ GLC EEA LL M E D VTFNIL+
Sbjct: 276 VANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILV 335
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+ G V+ ++LLE+M GC P+ +Y V+ G + EA L+ M
Sbjct: 336 DFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCK 395
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P+ +SY ++ GLC + D ++ M+QQG +P
Sbjct: 396 PNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLP 431
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++ LC G + A VLDE P + C ++ C G A L+ + ++G
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG 173
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D+ N+++S + +QG V+EG++LL ++ GC P+ SY VL GL KR+ + +
Sbjct: 174 CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVE 233
Query: 324 ELVGRM--ICERMS--------PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EL+ M + E +S P Y +I G+C E + +L +M G P +
Sbjct: 234 ELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNV 293
Query: 374 GMWREIV 380
+ ++
Sbjct: 294 VCYNTVL 300
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+++L+ C G +A L + C + + ++ +CE+G V+E LL ++ S
Sbjct: 147 HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPS 206
Query: 262 EGIDADTVTFNILISGL---RKQGKVEEGM-------KLLERMKGKGCYPNSASYQEVLY 311
G + D V++N ++ GL ++ VEE M + L +M GC P+ Y ++
Sbjct: 207 FGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIID 266
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
G+ A +++ RM + P+ V Y ++ GLC+ + E+ + +L +M Q+
Sbjct: 267 GICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE 322
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 149/288 (51%), Gaps = 8/288 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIM-QRIKV-EKLCRFSDGFFYNVIKIYGNMAGRISK----- 146
Y ++ L AKR+ +E++M + +KV E L + + I++Y + I K
Sbjct: 224 YNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHE 283
Query: 147 -AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A E L MPSY P+V +N VL + SA + + + + T + +D NIL+
Sbjct: 284 VANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILV 343
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
C+NG ++ +L++ + C P+V TY+T+++G C++G ++EA LL+ M S G
Sbjct: 344 DFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCK 403
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+T+++ I++ GL + + +L+ RM +GC PN ++ ++ L K +A EL
Sbjct: 404 PNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIEL 463
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ +M+ +P +SY +I GL E+ +L M+ +G P +
Sbjct: 464 LKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNV 511
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++ + A R++ E+++ + +K C D F N++ + G + + I
Sbjct: 299 PNVVCYNTVLKGICSADRWEKAEELLTEM-YQKNCPLDDVTF-NILVDFFCQNGLVDRVI 356
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M + C P V T+ V+N L E + + G + + I+LKGL
Sbjct: 357 ELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGL 416
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C A ++ +Q C PN T++T+++ LC+KG VE+A LL++M G + D
Sbjct: 417 CSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDL 476
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++++ +I GL K GK EE ++LL M KG PN +Y + + L + R + ++
Sbjct: 477 ISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDN 536
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + V Y +I LC ++ + L MV G +P + ++
Sbjct: 537 IQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALI 588
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 117/249 (46%), Gaps = 10/249 (4%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GRI+ A+ L +M S +C P +++++ + Y + + G +D
Sbjct: 130 GRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNC 189
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK---GNVEEAFG---- 254
N+++ +C+ G ++ +L + P CE ++ +Y+ ++ GLC G+VEE
Sbjct: 190 NLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVK 249
Query: 255 ---LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
L +M G D + +I G+ K+G E ++L RM G PN Y VL
Sbjct: 250 VHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLK 309
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G+ R+ +A+EL+ M + V++ L+ C LV+ V +L++M++ G +P
Sbjct: 310 GICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMP 369
Query: 372 RMGMWREIV 380
+ + ++
Sbjct: 370 DVITYTTVI 378
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 10/211 (4%)
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
G+++ AA + V +A +++GLC G + A VLDE ++C P Y +
Sbjct: 98 GQVEAARRLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVI 157
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ C G A +LE + ++G DT N++I+ + QG V+EG+++L ++ GC
Sbjct: 158 IESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGC 217
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRM--ICERMS--------PSFVSYKKLIHGLC 349
+ SY VL GL KR+ + +EL+ M + E +S P Y +I G+C
Sbjct: 218 EADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGIC 277
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ E + +L +M G P + + ++
Sbjct: 278 KEGHHEVANEILSRMPSYGLKPNVVCYNTVL 308
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 158/363 (43%), Gaps = 52/363 (14%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E LKI+ +R + P+ ++ +I A+ + D ++ ++
Sbjct: 218 EALKIYKEMR--------------HRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC 263
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
L DG Y ++ AG +S A+ +M C P V T+N +LN L +
Sbjct: 264 FGL--VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 321
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ +G+ + GV D C L+ G C G L+ A + D Q P++ TY+TL
Sbjct: 322 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 381
Query: 240 MHGL-----------------------------------CEKGNVEEAFGLLERMESEGI 264
+ G+ CEKG VE+AFG L+ M ++GI
Sbjct: 382 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 441
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ +T+N +I G + G V +G K L++M P+ +Y +++G + + + +A +
Sbjct: 442 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 501
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-RMGMWREIVGCV 383
L+ M E++ P V+Y LI+G V++ W+ +KM +G P R I G V
Sbjct: 502 LLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHV 561
Query: 384 TFG 386
T G
Sbjct: 562 TAG 564
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 136/289 (47%), Gaps = 4/289 (1%)
Query: 94 YTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
YTL +++ +A FD ++ ++ ++EK C F D +NV+ AG A+ +
Sbjct: 96 YTLNIMVHNYCKALEFDKVDAVIS--EMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
M S P + T+N VL L + ++ + ++ GV D IL+ G C
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G +E A + E + +P++ ++S L+ +G ++ A L M G+ D V +
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
++I G + G + + +++ + M G GC P+ +Y +L GL ++R +A+ L+ M
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P ++ LIHG C + ++ + M+ Q P + + ++
Sbjct: 334 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 382
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 112/239 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G I +A++ +M P + +F+ ++ L G+ D
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+++ G C G + A V DE C P+V TY+TL++GLC++ + +A GLL M
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D TF LI G +GK+++ ++L + M + P+ +Y ++ G+ + +
Sbjct: 334 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 393
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +L M + P+ V+Y LI C + VED L +M+ +G +P + + I+
Sbjct: 394 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 452
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 118/281 (41%), Gaps = 45/281 (16%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK----VEKLCRFSDGFFYNVIKIYGNMAGRI 144
P+ Y ++N L + +R E ++ ++ LC F+ +I Y + G++
Sbjct: 303 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFT-----TLIHGYC-IEGKL 356
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA++ M + P + T+N +++ + + ++ + + +IL
Sbjct: 357 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 416
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV--------------- 249
+ CE G +E AF LDE + PN+ TY++++ G C GNV
Sbjct: 417 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 476
Query: 250 --------------------EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+AF LL ME E + D VT+N+LI+G G V+E
Sbjct: 477 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 536
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ E+M KG P+ +Y ++ G + EA +L M+
Sbjct: 537 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEML 577
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 96/210 (45%), Gaps = 2/210 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +I+ + + D D+ + ++ F + Y+++ G++ A
Sbjct: 373 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREI--FPNHVTYSILIDSHCEKGQVEDAF 430
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +M + P++ T+N ++ + + Q V D N L+ G
Sbjct: 431 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 490
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ + AF +L+ K+ +P+V TY+ L++G GNV+EA + E+M ++GI+ D
Sbjct: 491 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 550
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKG 298
T+ +I+G G +E +L + M +G
Sbjct: 551 YTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%)
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
N E N T + ++H C+ ++ ++ ME + D VT N+++ + G E
Sbjct: 90 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 149
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
M L++ M KG P +Y VL GL + +A E+ M ++P S+ LI G
Sbjct: 150 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 209
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
C +E+ + K+M +G P + + ++G
Sbjct: 210 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIG 243
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 87/187 (46%)
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E++ LNI++ C+ + V+ E K+ P+V T++ ++ G+ E A
Sbjct: 92 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 151
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L++ M S+G+ VT+N ++ GL + G ++ ++ + M G P+ S+ ++ G
Sbjct: 152 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 211
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
EA ++ M + P VS+ LI + ++ L++M G VP
Sbjct: 212 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 271
Query: 375 MWREIVG 381
++ ++G
Sbjct: 272 IYTMVIG 278
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 2/283 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P++ Y +N L Q +M + E D F YN++ G++ +
Sbjct: 286 FEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEG--HDPDVFTYNIVVNCLCKNGQLEE 343
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M C P + TFN ++ L S E + G+ D NIL+
Sbjct: 344 AKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILIN 403
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G+ + A + +E C P+ TY+TL+ LC G + +A LL+ MES G
Sbjct: 404 ALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPR 463
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
TVT+N +I GL K+ ++EE ++ ++M +G N+ ++ ++ GL KR +A +L+
Sbjct: 464 STVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLI 523
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+MI E + P+ ++Y ++ C Q ++ +L+ M GF
Sbjct: 524 SQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGF 566
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 139/285 (48%), Gaps = 4/285 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGRISK 146
+P + ++IN + R +ED + I+ E F D YN G +
Sbjct: 252 SPTKVTVNVLINGYCKLGR---VEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGH 308
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A++ + M P V T+N+V+N L E +GI + G D N L+
Sbjct: 309 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIV 368
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC LE A + + + P+V T++ L++ LC+ G+ + A L E M+S G
Sbjct: 369 ALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTP 428
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D VT+N LI L GK+ + + LL+ M+ GC ++ +Y ++ GL K R EA+E+
Sbjct: 429 DEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVF 488
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+M + +S + +++ LI GLC K ++D + ++ +M+ +G P
Sbjct: 489 DQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQP 533
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 150/326 (46%), Gaps = 9/326 (2%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E+L DP + + +LN R+D+ P +Y II KL A D+M ++ V
Sbjct: 46 ELLTALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAA---GAADLM-KVLV 101
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGR---ISKAIETLFDM--PSYNCWPSVKTFNLVLNLLV 174
++ R V+ + R A++ + + P + +N +LN+LV
Sbjct: 102 TEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLV 161
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
++ +Y+ + G++ D N L+K LC + A +L+E P+
Sbjct: 162 EGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDET 221
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T++TLM G E+G+++ A + RM G VT N+LI+G K G+VE+ + +++
Sbjct: 222 TFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQE 281
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
G P+ +Y + GL A +++ M+ E P +Y +++ LC +
Sbjct: 282 IANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 341
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
E+ +L +MV++G +P + + ++
Sbjct: 342 EEAKGILNQMVERGCLPDITTFNTLI 367
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 129/251 (51%), Gaps = 4/251 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA++ L +M S C S T+N +++ L E + ++ G+ +A
Sbjct: 444 GKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 503
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC++ ++ A ++ + + +PN TY++++ C++G++++A +L+ M +
Sbjct: 504 NTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTA 563
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + D VT+ LI+GL K G+ + +KLL M+ KG +Y V+ L + +
Sbjct: 564 NGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRD 623
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC--NQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A L M P +YK + GLC + E D++L +MV +GF+P +R +
Sbjct: 624 AMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLL-EMVDKGFIPEFSSFRML 682
Query: 380 V-GCVTFGKDN 389
G + G D+
Sbjct: 683 AEGLLNLGMDD 693
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 126/273 (46%), Gaps = 2/273 (0%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VLNQ + +Y ++N L + + +E + + + D +N +
Sbjct: 136 VLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGI--KPDVVTFNTLMK 193
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
A ++ A+ L +M S P TF ++ V + ++G
Sbjct: 194 ALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSP 253
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+N+L+ G C+ G +E A + + EP+ TY+T ++GLC+ G+V A ++
Sbjct: 254 TKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVM 313
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ M EG D D T+NI+++ L K G++EE +L +M +GC P+ ++ ++ L
Sbjct: 314 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSG 373
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
R EA +L ++ + +SP ++ LI+ LC
Sbjct: 374 NRLEEALDLARQVTLKGLSPDVYTFNILINALC 406
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 158/363 (43%), Gaps = 52/363 (14%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E LKI+ +R + P+ ++ +I A+ + D ++ ++
Sbjct: 279 EALKIYKEMR--------------HRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC 324
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
L DG Y ++ AG +S A+ +M C P V T+N +LN L +
Sbjct: 325 FGL--VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 382
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ +G+ + GV D C L+ G C G L+ A + D Q P++ TY+TL
Sbjct: 383 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 442
Query: 240 MHGL-----------------------------------CEKGNVEEAFGLLERMESEGI 264
+ G+ CEKG VE+AFG L+ M ++GI
Sbjct: 443 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 502
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ +T+N +I G + G V +G K L++M P+ +Y +++G + + + +A +
Sbjct: 503 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 562
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-RMGMWREIVGCV 383
L+ M E++ P V+Y LI+G V++ W+ +KM +G P R I G V
Sbjct: 563 LLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHV 622
Query: 384 TFG 386
T G
Sbjct: 623 TAG 625
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 136/289 (47%), Gaps = 4/289 (1%)
Query: 94 YTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
YTL +++ +A FD ++ ++ ++EK C F D +NV+ AG A+ +
Sbjct: 157 YTLNIMVHNYCKALEFDKVDAVIS--EMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
M S P + T+N VL L + ++ + ++ GV D IL+ G C
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G +E A + E + +P++ ++S L+ +G ++ A L M G+ D V +
Sbjct: 275 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
++I G + G + + +++ + M G GC P+ +Y +L GL ++R +A+ L+ M
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 394
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P ++ LIHG C + ++ + M+ Q P + + ++
Sbjct: 395 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 443
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G I +A++ +M P + +F+ ++ L G+ D
Sbjct: 274 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 333
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+++ G C G + A V DE C P+V TY+TL++GLC++ + +A GLL M
Sbjct: 334 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 393
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ D TF LI G +GK+++ ++L + M + P+ +Y ++ G+ +
Sbjct: 394 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD 453
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A +L M + P+ V+Y LI C + VED L +M+ +G +P + + I+
Sbjct: 454 KANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 513
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 45/288 (15%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK----VEKLCRFSDGFFYNVIKIYGNMAGRI 144
P+ Y ++N L + +R E ++ ++ LC F+ +I Y + G++
Sbjct: 364 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFT-----TLIHGYC-IEGKL 417
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA++ M + P + T+N +++ + + ++ + + +IL
Sbjct: 418 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 477
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV--------------- 249
+ CE G +E AF LDE + PN+ TY++++ G C GNV
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537
Query: 250 --------------------EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+AF LL ME E + D VT+N+LI+G G V+E
Sbjct: 538 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 597
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
+ E+M KG P+ +Y ++ G + EA +L M+ +P
Sbjct: 598 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 1/171 (0%)
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
N E N T + ++H C+ ++ ++ ME + D VT N+++ + G E
Sbjct: 151 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 210
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
M L++ M KG P +Y VL GL + +A E+ M ++P S+ LI G
Sbjct: 211 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 270
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT-FGKDNRNRVYVTE 397
C +E+ + K+M +G P + + ++G GK + Y+ E
Sbjct: 271 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE 321
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 87/187 (46%)
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E++ LNI++ C+ + V+ E K+ P+V T++ ++ G+ E A
Sbjct: 153 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 212
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L++ M S+G+ VT+N ++ GL + G ++ ++ + M G P+ S+ ++ G
Sbjct: 213 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
EA ++ M + P VS+ LI + ++ L++M G VP
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 332
Query: 375 MWREIVG 381
++ ++G
Sbjct: 333 IYTMVIG 339
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 2/278 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
+ L+I+ LA+ FD I++ +K + + F +I Y +G KA+E+
Sbjct: 99 HNLVIDMLAKDDGFDTYWKILEELKNSNI-QIPPPTFSVLIAAYAK-SGMAEKAVESFGK 156
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + C P V T+N +L+++V +++ +Y KL + ILL GLC+NG
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A + DE ++ PN Y+ ++ GLC+ ++ LL M+ G D++T N
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ G K G+++E LL+ + +G Y ++ GL KR+ E +E +M
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P V Y LI G C +V+ +L M Q+G P
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSP 374
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 141/303 (46%), Gaps = 13/303 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K PN +YT+I++ L QAKR D + ++ +KV C D N + G+
Sbjct: 229 QKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCC--PDSITCNALLDGFCKLGQ 286
Query: 144 ISKAIE--TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
I +A LF+ Y +K ++ +++ L AK Y E+Q K G+E D
Sbjct: 287 IDEAFALLQLFEKEGYVL--GIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLY 344
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
IL++G CE G ++ A +L++ ++ P+ Y+ L+ G C+ G +++A L +
Sbjct: 345 TILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISK 404
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ T+ ILI G+ + G ++E ++ +M+ GC P+ ++ ++ GL E
Sbjct: 405 NDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEE 464
Query: 322 AKELVGRM-------ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
A+ L +M + R+S +G ED VL +MV+ G P
Sbjct: 465 ARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSA 524
Query: 375 MWR 377
+++
Sbjct: 525 VYK 527
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 126/325 (38%), Gaps = 73/325 (22%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++V NQ K +YNPN A + +++N L +
Sbjct: 186 LAVYNQMLKL-NYNPNRATFVILLNGLCKN------------------------------ 214
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G+ A++ +M P+ + ++L+ L AK ++ + + G
Sbjct: 215 -------GKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGC 267
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ--------------------------- 227
D+ N LL G C+ G ++ AF +L F K+
Sbjct: 268 CPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQE 327
Query: 228 --------NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
EP+V Y+ L+ G CE G V+ A +L M G+ DT +N LI G
Sbjct: 328 WCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFC 387
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
G +++ L + C+P S +Y ++ G+ EA+++ +M SPS +
Sbjct: 388 DVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIM 447
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKM 364
++ LI GLC +E+ + KM
Sbjct: 448 TFNALIDGLCKAGELEEARHLFYKM 472
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
S+ W T NLV+++L + I ++I ++L+ ++G E
Sbjct: 92 SFRSW---VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAE 148
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A + C+P+V TY++++H + +K A + +M + + TF IL+
Sbjct: 149 KAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILL 208
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+GL K GK ++ +K+ + M KG PN+ Y +L GL KR + L+ M
Sbjct: 209 NGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCC 268
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
P ++ L+ G C +++ +L+ ++G+V
Sbjct: 269 PDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYV 303
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 128/330 (38%), Gaps = 49/330 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
P+ LYT++I + D +++ + L D + YN +IK + ++ G + KA
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLS--PDTYCYNALIKGFCDV-GLLDKA 395
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ +C+P+ T+ +++ + L E + I+ LG N L+ G
Sbjct: 396 RSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDG 455
Query: 208 LCENGNLEAA------------------------------------------FYVLDEFP 225
LC+ G LE A F VLD+
Sbjct: 456 LCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMV 515
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
K C P+ Y LM C KG + AF L + + T + K G++E
Sbjct: 516 KNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEK-GELE 574
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
+ ++ L M K A Y L GL +R EA ++ + +M + S LI
Sbjct: 575 KAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLI 634
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGF--VPRM 373
+GLC +E + +++GF +PR+
Sbjct: 635 NGLCKDGNLEMAVDIFLYTLEKGFMLMPRI 664
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T++ ++ L + + + +LE +++ I TF++LI+ K G E+ ++ +M
Sbjct: 98 THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
K GC P+ +Y +L+ ++ K+ F A + +M+ +P+ ++ L++GLC
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRNRVYVTETV 399
+D + +M Q+G P ++ I+ C D+ +R+ T V
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKV 264
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 5/294 (1%)
Query: 83 KRKDYN---PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
KR + N P+ Y +II+ L + + + D + + + + D Y I
Sbjct: 292 KRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIP--PDVVTYTTILHGLC 349
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G++++AI M C P V +N +++ L +L + + G+ +A
Sbjct: 350 YLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAV 409
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+ +L G C G L+ A + E +N PN T+S L+ GLC++G V EA + E M
Sbjct: 410 TYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETM 469
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+G++ + T+N L++G + K+ E K+ E M GKGC P+ SY ++ G + +R
Sbjct: 470 TEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRM 529
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+AK L+ +M ++++P+ V+Y ++ GLC + D + KKM G +P +
Sbjct: 530 DKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTL 583
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 155/345 (44%), Gaps = 19/345 (5%)
Query: 66 SNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF 125
SN + ISV L + + NP ++ K +I + Q V LC
Sbjct: 66 SNSSNTISVDDALASFYRMARMNPRPSIVEF-------GKFLGSIAKMKQYSTVVYLCNQ 118
Query: 126 SD--GFFYNV--IKIYGNMAGRISK---AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
D G + V + I N R++ A+ M P V TF ++N + +
Sbjct: 119 MDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGK 178
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+Y + G E D N L+ GLC +GN A +V + + C+PNV TY+T
Sbjct: 179 IKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNT 238
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++ LC+ V +A L M GI D +T+N ++ GL G++ E +L +RM+ G
Sbjct: 239 IIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNG 298
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C P+ +Y ++ L + +A + + M+ + + P V+Y ++HGLC + +
Sbjct: 299 CKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAI 358
Query: 359 WVLKKMVQQGFVPRMGMWREIVGCVTFGKD---NRNRVYVTETVD 400
+ KKM Q+G P + + I+ + KD N +++E VD
Sbjct: 359 RLFKKMEQKGCKPDVVAYNTIID--SLCKDRLVNDAMEFLSEMVD 401
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 35/275 (12%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + A+ M C P+V T+N +++ L +L + + G+ DA
Sbjct: 211 SGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAIT 270
Query: 201 LNILLKGLCENGNLEAAFYV-----------------------------------LDEFP 225
N ++ GLC G L A + L E
Sbjct: 271 YNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMV 330
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
Q P+V TY+T++HGLC G + EA L ++ME +G D V +N +I L K V
Sbjct: 331 DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVN 390
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
+ M+ L M +G PN+ +Y +L+G + + EA +L M+ + P+ +++ L+
Sbjct: 391 DAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILV 450
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
GLC + +V + WV + M ++G P + + ++
Sbjct: 451 DGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALM 485
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 143/292 (48%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT I++ L + + + ++++ +K C+ D YN I ++ A+
Sbjct: 336 PDVVTYTTILHGLCYLGQLNEAIRLFKKME-QKGCK-PDVVAYNTIIDSLCKDRLVNDAM 393
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M P+ T++ +L+ + E ++ V + +IL+ GL
Sbjct: 394 EFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGL 453
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G + A +V + ++ EPN+ TY+ LM+G C + + EA + E M +G D
Sbjct: 454 CQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDL 513
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++NILI+G ++++ LL +M K PN+ +Y ++ GL R +A+EL +
Sbjct: 514 HSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKK 573
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M M P+ ++Y L++GLC +++ + K M ++ P + ++ ++
Sbjct: 574 MCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILI 625
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 139/290 (47%), Gaps = 4/290 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
++K P+ Y II+ L + + DA+E + + V++ + + ++ + N+
Sbjct: 365 EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEM--VDRGIPPNAVTYSTILHGFCNL- 421
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A + +M N P+ TF+++++ L + E + ++ + + GVE +
Sbjct: 422 GQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTY 481
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C + A V + + C P++ +Y+ L++G C +++A LL +M
Sbjct: 482 NALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSV 541
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + +TVT+N ++ GL G++ + +L ++M G P +Y +L GL E
Sbjct: 542 KKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDE 601
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A +L M +++ P + Y LI G+ +E + K+ G P
Sbjct: 602 ALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQP 651
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 126/275 (45%), Gaps = 2/275 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y+ I++ + D + + + + + ++++ G +S+A
Sbjct: 406 PNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNV--MPNTLTFSILVDGLCQEGMVSEAR 463
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M P++ T+N ++N E + ++ G D NIL+ G
Sbjct: 464 WVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGY 523
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C + ++ A +L + + PN TY+T+M GLC G + +A L ++M S G+
Sbjct: 524 CNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTL 583
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++IL++GL K G ++E +KL + MK K P+ Y ++ G+ + AK L +
Sbjct: 584 MTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSK 643
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+ + + P +Y +I GL + L ++ + +K
Sbjct: 644 LSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGR 143
K PN Y ++N + + + + I V K C D YN+ I Y N + R
Sbjct: 472 KGVEPNIYTYNALMNGYCLRCKMNEARKVFE-IMVGKGCA-PDLHSYNILINGYCN-SRR 528
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA L M P+ T+N ++ L + Q ++ G+ +I
Sbjct: 529 MDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSI 588
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC++G+L+ A + ++ EP++ Y+ L+ G+ G +E A GL ++ ++G
Sbjct: 589 LLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADG 648
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
I T+N++I GL K+G +E +L + K
Sbjct: 649 IQPPGRTYNVMIKGLLKEGLSDEAYELFRKWK 680
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 2/278 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
+ L+I+ LA+ FD I++ +K + + F +I Y +G KA+E+
Sbjct: 99 HNLVIDMLAKDDGFDTYWKILEELKNSNI-QIPPPTFSVLIAAYAK-SGMAEKAVESFGK 156
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + C P V T+N +L+++V +++ +Y KL + ILL GLC+NG
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A + DE ++ PN Y+ ++ GLC+ ++ LL M+ G D++T N
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ G K G+++E LL+ + +G Y ++ GL KR+ E +E +M
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P V Y LI G C +V+ +L M Q+G P
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSP 374
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 144/312 (46%), Gaps = 19/312 (6%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K PN +YT+I++ L QAKR D + ++ +KV C D N + G+
Sbjct: 229 QKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCC--PDSITCNALLDGFCKLGQ 286
Query: 144 ISKAIE--TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
I +A LF+ Y +K ++ +++ L AK Y E+Q K G+E D
Sbjct: 287 IDEAFALLQLFEKEGYVL--GIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLY 344
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
IL++G CE G ++ A +L++ ++ P+ Y+ L+ G C+ G +++A L +
Sbjct: 345 TILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISK 404
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ T+ ILI G+ + G ++E ++ +M+ GC P+ ++ ++ GL E
Sbjct: 405 NDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEE 464
Query: 322 AKELVGRMICERMSPSFV-------------SYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A+ L +M + F+ S + ++ LC L+ +L ++ G
Sbjct: 465 ARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSG 524
Query: 369 FVPRMGMWREIV 380
VP + + ++
Sbjct: 525 VVPDIMTYNVLI 536
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 15/297 (5%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ +I+ L +AKR+D +++ + K+ K D Y ++ G + A+ L D
Sbjct: 309 YSSLIDGLFRAKRYDEVQEWCR--KMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLND 366
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P +N ++ L + + + +K +C IL+ G+C NG
Sbjct: 367 MTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGL 426
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-----------SE 262
L+ A + ++ C P++ T++ L+ GLC+ G +EEA L +ME S+
Sbjct: 427 LDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQ 486
Query: 263 GID--ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G D DT + ++ L + G + + KLL ++ G P+ +Y ++ G K
Sbjct: 487 GADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNIN 546
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
A +L + + SP V+Y LI G ED VL +MV+ G P +++
Sbjct: 547 GAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYK 603
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 126/325 (38%), Gaps = 73/325 (22%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++V NQ K +YNPN A + +++N L +
Sbjct: 186 LAVYNQMLKL-NYNPNRATFVILLNGLCKN------------------------------ 214
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G+ A++ +M P+ + ++L+ L AK ++ + + G
Sbjct: 215 -------GKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGC 267
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ--------------------------- 227
D+ N LL G C+ G ++ AF +L F K+
Sbjct: 268 CPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQE 327
Query: 228 --------NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
EP+V Y+ L+ G CE G V+ A +L M G+ DT +N LI G
Sbjct: 328 WCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFC 387
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
G +++ L + C+P S +Y ++ G+ EA+++ +M SPS +
Sbjct: 388 DVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIM 447
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKM 364
++ LI GLC +E+ + KM
Sbjct: 448 TFNALIDGLCKAGELEEARHLFYKM 472
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 17/277 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
P+ LYT++I + D +++ + L D + YN +IK + ++ G + KA
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLS--PDTYCYNALIKGFCDV-GLLDKA 395
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ +C+P+ T+ +++ + L E + I+ LG N L+ G
Sbjct: 396 RSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDG 455
Query: 208 LCENGNLEAA---FYVLD--EFPK------QNCEPNVRTYS--TLMHGLCEKGNVEEAFG 254
LC+ G LE A FY ++ + P Q + + T S T++ LCE G + +A+
Sbjct: 456 LCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYK 515
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL ++ G+ D +T+N+LI+G K + KL ++ KG P+S +Y ++ G
Sbjct: 516 LLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFH 575
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
R +A ++ +M+ +PS YK L+ C +
Sbjct: 576 RVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRK 612
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 16/246 (6%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+++LN ++R +P+ Y +I D + ++++ K F Y ++
Sbjct: 361 LNMLNDMTQR-GLSPDTYCYNALIKGFCDVGLLDKARSL--QLEISKNDCFPTSCTYTIL 417
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA---- 190
G + +A + M + C PS+ TFN +++ L A E + ++
Sbjct: 418 ICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKN 477
Query: 191 -------KLGVE--IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
G + +D L +++ LCE+G + A+ +L + P++ TY+ L++
Sbjct: 478 PSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLIN 537
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
G C+ N+ AF L ++ +G D+VT+ LI G + + E+ ++L++M GC P
Sbjct: 538 GFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTP 597
Query: 302 NSASYQ 307
+SA Y+
Sbjct: 598 SSAVYK 603
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
S+ W T NLV+++L + I ++I ++L+ ++G E
Sbjct: 92 SFRSWV---THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAE 148
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A + C+P+V TY++++H + +K A + +M + + TF IL+
Sbjct: 149 KAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILL 208
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+GL K GK ++ +K+ + M KG PN+ Y +L GL KR + L+ M
Sbjct: 209 NGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCC 268
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
P ++ L+ G C +++ +L+ ++G+V
Sbjct: 269 PDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYV 303
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T++ ++ L + + + +LE +++ I TF++LI+ K G E+ ++ +M
Sbjct: 98 THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
K GC P+ +Y +L+ ++ K+ F A + +M+ +P+ ++ L++GLC
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRNRVYVTETV 399
+D + +M Q+G P ++ I+ C D+ +R+ T V
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKV 264
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 97/235 (41%), Gaps = 3/235 (1%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G I KA + L + P + T+N+++N AK ++ G D+
Sbjct: 507 SGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVT 566
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G E AF VLD+ K C P+ Y LM C KG + AF L +
Sbjct: 567 YGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYL 626
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ T + K G++E+ ++ L M K A Y L GL +R
Sbjct: 627 RSLPSQEDETLKLAEEHFEK-GELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSE 685
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF--VPRM 373
EA ++ + +M + S LI+GLC +E + +++GF +PR+
Sbjct: 686 EALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRI 740
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 147/303 (48%), Gaps = 39/303 (12%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ YT +I + K D ++ I +K C+ ++ + N+I AGRI++A
Sbjct: 226 HPDTFTYTSLILGHCRNKGVDNAYEVF-LIMPQKGCQRNEVSYTNLIHGLCE-AGRINEA 283
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ DM NC P+V+T+ +L+
Sbjct: 284 LKLFADMTEDNCCPTVRTYT-----------------------------------VLIYA 308
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L +G A + +E ++ CEPNV TY+ L+ GLC++ ++EA +L M +G+
Sbjct: 309 LSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPS 368
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+N LI G K+G +++ ++L+ M+ C PN+ +Y E++ GL K++ +A L+
Sbjct: 369 VVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLN 428
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
+M+ ++SPS ++Y LIHG C +E +L M + G VP W V T K
Sbjct: 429 KMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVP--DQWTYSVFIDTLCK 486
Query: 388 DNR 390
+ R
Sbjct: 487 EGR 489
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 164/365 (44%), Gaps = 40/365 (10%)
Query: 75 ISVLNQYS--KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ LN ++ K K PN YT++I+ L + + D ++ + + L YN
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL--IPSVVTYN 373
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ G I A E L M S +C P+ +T+N ++ L + + + +
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
+ N L+ G C+ +LE+A+ +L + P+ TYS + LC++G VEEA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L + ++++G+ A+ V + LI G K GK++ LLERM C PNS +Y ++ G
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLI--------------------------- 345
L +K+ EA LV +M+ + P+ V+Y LI
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613
Query: 346 --------HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVT 396
H +Q ++E+VD V+ KM ++G +P + + ++ G G +R ++
Sbjct: 614 VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673
Query: 397 ETVDS 401
VD+
Sbjct: 674 CMVDT 678
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 144/327 (44%), Gaps = 37/327 (11%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
NE YT +I+ L +A R + + + + C + + + G +GR +A+
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSG--SGRKVEALN 320
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+M C P+V T+ ++++ L E + + + ++ G+ N L+ G C
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G ++ AF +LD +C PN RTY+ L+ GLC+K V +A LL +M + +
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI 440
Query: 270 TFNILISG-----------------------------------LRKQGKVEEGMKLLERM 294
T+N LI G L K+G+VEE L + +
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV 500
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
K KG N Y ++ G + A L+ RM+ + P+ +Y LI GLC +K +
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIVG 381
++ ++ KM+ G P + + ++G
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIG 587
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 147/326 (45%), Gaps = 16/326 (4%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L+P+ V +F+ DP + +S N + R + N Y+ ++N L +A+ E I
Sbjct: 66 LTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKI-- 123
Query: 116 RIK-VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
RI ++ C D F V++++ M + P+++ +N +L L
Sbjct: 124 RISMIKSCCSIEDVLF--VLEVFRKMNAD-----------GEFKFKPTLRCYNTILMSLS 170
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
L E++ +Y + + N ++ G C+ GN+ A + + P+
Sbjct: 171 KFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTF 230
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TY++L+ G C V+ A+ + M +G + V++ LI GL + G++ E +KL M
Sbjct: 231 TYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
C P +Y ++Y L R EA L M + P+ +Y LI GLC + +
Sbjct: 291 TEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKM 350
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
++ +L +M ++G +P + + ++
Sbjct: 351 DEARKMLSEMSEKGLIPSVVTYNALI 376
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P T+++ ++ L E ++ S GV+ + L+ G C+ G ++ A+ +
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L+ C PN TY+ L+ GLC++ ++EA L+ +M + G+ VT+ ILI + K
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G + +K+ M G P+ +Y L+ + E +++ +M E + P V+
Sbjct: 592 DGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
Y LI G L LK MV G P +
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSL 684
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 132/327 (40%), Gaps = 31/327 (9%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K NE +YT +I+ + + D +++R+ + C + + YNV+
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM-LNDAC-LPNSYTYNVLIEGLCKEK 558
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A + M + P+V T+ +++ ++ + ++ LG + D C
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L G LE V+ + ++ P++ TY+ L+ G G AF L+ M
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678
Query: 263 GIDADTVTFNILISGLRKQGKVEE-----------------------------GMKLLER 293
G +ILI L + +++E +KL E+
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEK 738
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M GC + + Y ++ G ++R EA+ LV M MSPS Y L+ C +
Sbjct: 739 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGV 798
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++ MV+ G +P + ++ +V
Sbjct: 799 YAEAVRLVDAMVENGLLPLLESYKLLV 825
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 127/282 (45%), Gaps = 10/282 (3%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRIS 145
Y P+ YT ++ + ++D++ ++ E + D Y V I Y + G
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI--LPDLVTYTVLIDGYARL-GLTH 666
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A + L M C PS+ ++++ L E + +++G++ + ++ +
Sbjct: 667 RAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR------SEIGIDSVSNVNSVDI 720
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
+ + E A + ++ + C +V Y L+ G C++ +EEA GL+ M+ G+
Sbjct: 721 ADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMS 780
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+N L+ K G E ++L++ M G P SY+ ++ GL + +AK +
Sbjct: 781 PSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAV 840
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ + V++K LI GL + LV++ ++ M ++
Sbjct: 841 FHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 882
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 143/283 (50%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +++ + + + +++ ++ E + YNV+ G + A+
Sbjct: 200 PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGC--TPNNVTYNVLMDGMCGEGDVDDAL 257
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L ++PS+ C PS +N VL L SA+ +G+ + T + + N+++ L
Sbjct: 258 ELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSL 317
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G L+ A +L++ K C N+ TY+ +++GLCE+ NV+ A GLL +M+S G D
Sbjct: 318 CRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDI 377
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N L+ GL + + +L++ M GC P++ ++ ++ L K +A E+ +
Sbjct: 378 VTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQ 437
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + +P+ ++Y +I GL ++ + +M +GF P
Sbjct: 438 MPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNP 480
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 147/295 (49%), Gaps = 8/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR--FSDGFFYNVIKIYGNMAGR-IS 145
PN Y +I+ L + + + D + + + LCR D YN++ + GR
Sbjct: 165 PNAYTYNPLIHTLCERGQ---VRDALSVLD-DMLCRGCAPDVVTYNIL-LEATCKGRGYR 219
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A+E + M + C P+ T+N++++ + + + + G + N +L
Sbjct: 220 QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVL 279
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
KGLC A ++ E ++NC PN T++ +++ LC KG +++A LLE+M G
Sbjct: 280 KGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 339
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
A+ VT+N +I+GL +Q V+ M LL +MK GC P+ +Y +L GL ++ +A+EL
Sbjct: 340 ANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEEL 399
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ M P V++ LI LC + L+ D V K+M +G P + I+
Sbjct: 400 MDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII 454
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 112/212 (52%), Gaps = 10/212 (4%)
Query: 179 YGEIQGIYTSAAKLG----------VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
YG + Y A +LG V+ +A N L+ LCE G + A VLD+ +
Sbjct: 138 YGALTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRG 197
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
C P+V TY+ L+ C+ +A L++ M +EG + VT+N+L+ G+ +G V++ +
Sbjct: 198 CAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDAL 257
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+LL + GC P++ +Y VL GL +R+ +A ELV M+ E P+ ++ +I+ L
Sbjct: 258 ELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSL 317
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C + L++ +L+KM + G + + I+
Sbjct: 318 CRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 349
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 137/283 (48%), Gaps = 3/283 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L A+R+ ++++ + E C ++ F NV+ G + +AI
Sbjct: 270 PSTVNYNTVLKGLCSAERWGDADELVTEMLREN-CPPNEATF-NVVIYSLCRKGLLQQAI 327
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L M + C ++ T+N ++N L + G+ + G + D N LLKGL
Sbjct: 328 QLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGL 387
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C A ++D + C P+ T++TL+ LC+KG + +A + ++M +G ++
Sbjct: 388 CSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNS 447
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ +ISGL K K+++ ++L M KG P+ YQ + L D EA + V +
Sbjct: 448 ITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRK 506
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +SP V Y ++ GLC E ++ MV G +P
Sbjct: 507 LQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMP 549
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 39/285 (13%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R++ PNEA + ++I L + +++ K+ K ++ YN I I G R
Sbjct: 300 RENCPPNEATFNVVIYSLCRKGLLQQAIQLLE--KMSKHGCTANIVTYNAI-INGLCEQR 356
Query: 144 -ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A+ L M SY C P + T+N +L L SA + + + + + + G D N
Sbjct: 357 NVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFN 416
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE----------------K 246
L+ LC+ G + A V + P + C PN TYST++ GL + K
Sbjct: 417 TLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHK 476
Query: 247 G------------------NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
G +EEA + +++ GI TV +N ++ GL + GK E +
Sbjct: 477 GFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAI 536
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
++ M GC P+ +Y ++ GL + EA+EL+ ++ C R
Sbjct: 537 DIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL-CSR 580
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 7/255 (2%)
Query: 64 IFSNLRDPISVISVLNQYSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK 121
I + L + +V + SK K Y P+ Y ++ L A ++ E++M + +
Sbjct: 348 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNM-TQN 406
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
C D +N + + G + AIE MP C P+ T++ +++ L A +
Sbjct: 407 GC-LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQ 465
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
++ G D +L + L ++ +E A + + P+ Y+ ++
Sbjct: 466 ALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILL 524
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GLC G E A ++ M S G D +T+ ILI GL +G + E +LL ++ +
Sbjct: 525 GLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLV 584
Query: 302 NSASYQEVLYGLLDK 316
NS E L LLD+
Sbjct: 585 NSLIKSEAL--LLDQ 597
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 17/140 (12%)
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
R S L+H +G+++ A L+E S D N L+ L ++G+ ++ ER
Sbjct: 76 RRLSALVH----RGDLDAALRLVE---SSPRPPDAALANRLVRDLCRRGRPDDA----ER 124
Query: 294 MKGKGCYPNSA--SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ G C P + +Y + G R +A+ +VG M + P+ +Y LIH LC +
Sbjct: 125 VVG-ACGPAATVVAYGALTDGYCRAGRLGDARRVVGGM---PVQPNAYTYNPLIHTLCER 180
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
V D VL M+ +G P
Sbjct: 181 GQVRDALSVLDDMLCRGCAP 200
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 163/327 (49%), Gaps = 8/327 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
++P ++ K+ D + +++ +K Y +Y ++I+KL AK F I+ ++
Sbjct: 67 ITPFQLCKLLLLPLDVSTSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLL 126
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFNLVLNLLV 174
+IK E + F + F ++K YG A +A L DM Y C P+ K++N+VL++LV
Sbjct: 127 QIKEEGIA-FRESLFICIMKYYGR-ANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILV 184
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
SA ++ GV +++K LC ++ A +L + K C PN
Sbjct: 185 SANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSV 244
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y TL+H L ++ V EA LLE M G D TFN +I GL + ++ EG KL++RM
Sbjct: 245 VYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRM 304
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+G PN +Y ++ GL + EA+ L+ ++ +P+ V + LI+G +
Sbjct: 305 LFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKV----PTPNDVHFTILINGYVKSGRL 360
Query: 355 EDVDWVL-KKMVQQGFVPRMGMWREIV 380
++ + L KM++ G P + + ++
Sbjct: 361 DEANAFLYDKMIKNGCRPDVFTFNTLI 387
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 148/293 (50%), Gaps = 3/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
PN+ +T++IN ++ R D + ++ CR D F +N + I+G G + A
Sbjct: 342 PNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCR-PDVFTFNTL-IHGLCKKGLMGSA 399
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ + DM + C P++ T+ +L+ E + + G E++ N+LL+
Sbjct: 400 VDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRA 459
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+NG + A +L E + C+P++ T++TL+ GLC+ E+A L M +G+ A+
Sbjct: 460 LCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIAN 519
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TVT+N LI + G ++E +KL+ M +GC + +Y ++ +A L
Sbjct: 520 TVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFD 579
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + + PS +S LI+GLC V + +L+ M+ +G P + + ++
Sbjct: 580 EMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLI 632
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 137/308 (44%), Gaps = 3/308 (0%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
S + ++N S PN YT +++ + + + ++ + + G YN
Sbjct: 398 SAVDMVNDMSA-NGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMG--YN 454
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
V+ G++ KA++ L +M C P + TFN ++ L + +Y
Sbjct: 455 VLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLD 514
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GV + N L+ G ++ A ++++ + C + TY+ L+ C+ G E+A
Sbjct: 515 GVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKA 574
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
GL + M + + ++ N+LI+GL + GKV ++LL M +G P+ +Y ++ G
Sbjct: 575 LGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLING 634
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L EA L ++ E + P ++Y LI C + +D +L + V+ F+P
Sbjct: 635 LCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPN 694
Query: 373 MGMWREIV 380
W +V
Sbjct: 695 DVTWYILV 702
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 4/199 (2%)
Query: 95 TLIINKLAQA-KRFDAIEDIMQRIK--VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
T+ N L A R AI++ ++ + + + C + + +IK + + G KA+
Sbjct: 520 TVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKL-GATEKALGLF 578
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+M + PS + NL++N L + G+ D N L+ GLC+
Sbjct: 579 DEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKM 638
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
GN+ AF + ++ + +P+ TY+TL+ C G ++A+ LL R + VT+
Sbjct: 639 GNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTW 698
Query: 272 NILISGLRKQGKVEEGMKL 290
IL+S K+ E G+
Sbjct: 699 YILVSNFIKEIGKENGISF 717
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 144/301 (47%), Gaps = 19/301 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK---VEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PNE Y +I+ L +A + D +++ ++ + +G + K AGR
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCK-----AGRFG 82
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL---- 201
A+ + C P + TFN++++ LV + E I+ S + + CL
Sbjct: 83 DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFES-----MHTSSQCLPNVV 137
Query: 202 --NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
++ GLC++G L+ A +LD + C PNV TYS L+ GLC+ G ++ F LL+ M
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G D + +N L++GL K +++E ++L++ M GCYP +Y ++ K+
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A L+ M P ++Y +I GLC ++D +LK+MV VP + + I
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTI 317
Query: 380 V 380
+
Sbjct: 318 I 318
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 145/344 (42%), Gaps = 44/344 (12%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q R+ + P+ +Y ++N L +++R D +++Q + + C + YN +
Sbjct: 193 LLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQ-LMIRSGC-YPTVVTYNSLMEL 250
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+ ++ +A + M C P V +N V+ L + Q + D
Sbjct: 251 FCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPD 310
Query: 198 ACCLNILLKGLCENG------NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
+ ++ GLC++ LEAA +L+ + C PN TY+ ++ GLC ++
Sbjct: 311 VITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQ 370
Query: 252 AFGLLERM--------------------ESEGIDA---------------DTVTFNILIS 276
A LL RM +S +DA + V + LI
Sbjct: 371 ALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALID 430
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
GL K G+V++ +++ E M + P A+Y VL GL R EA +V MI + P
Sbjct: 431 GLSKGGEVDKAVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFP 489
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
SY LI GLC VE+ + + + +GF +G++ +V
Sbjct: 490 DGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 138/299 (46%), Gaps = 11/299 (3%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q + P+ Y +I L + R D + +++++ + D Y+ I I
Sbjct: 263 LIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC--VPDVITYSTI-ID 319
Query: 138 G-------NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
G + ++ A E L M C P+ T+ +V+ L A+ + +
Sbjct: 320 GLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMI 379
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
V D ++++ LC++ +L+AA+ + ++ C+PN Y+ L+ GL + G V+
Sbjct: 380 DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVD 439
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A + E M E T+N ++ GL G++EE ++++E M K C+P+ ASY ++
Sbjct: 440 KAVRVFELM-VESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALI 498
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
GL EA EL + + + Y L++ LC +K + D V K+++ G+
Sbjct: 499 RGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 36/193 (18%)
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI------------------- 264
F ++ C PN TY +L+HGLC+ G +++A+ LL+ M GI
Sbjct: 21 FREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGR 80
Query: 265 --DA--------------DTVTFNILISGLRKQGKVEEGMKLLERMKGKG-CYPNSASYQ 307
DA D +TFNIL+ L K G+VEE ++ E M C PN +Y
Sbjct: 81 FGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYT 140
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
V+ GL + A EL+ M P+ ++Y L+ GLC + +L++M ++
Sbjct: 141 TVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR 200
Query: 368 GFVPRMGMWREIV 380
GF P + M+ ++
Sbjct: 201 GFQPDVIMYNTLL 213
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 1/214 (0%)
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C P+ T+ +++ L A + + G+ N +++GLC+ G A
Sbjct: 26 CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDAL 85
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-SEGIDADTVTFNILISG 277
C P++ T++ L+ L + G VEEAF + E M S + VT+ +I+G
Sbjct: 86 GYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVING 145
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L K GK++ ++LL+ M GC PN +Y ++ GL R + L+ M P
Sbjct: 146 LCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPD 205
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ Y L++GLC + +++ +++ M++ G P
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 179/389 (46%), Gaps = 16/389 (4%)
Query: 7 FARNHRQSIIQSLSSASTITRK----RTFALASPSASHQDSDHHA----YKLNHKDWLSP 58
F N+ +S+ LS TI ++F S + ++S H ++ + +SP
Sbjct: 18 FGCNNGRSLPFPLSQPFTILSPHFYPKSFCSQSVNGKSRNSTGHRETNDTQMKTQKPISP 77
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTL-----IINKLAQAKRFDAIEDI 113
+ + +DP + + + P Y+L II+KL +AK FD +E+I
Sbjct: 78 FRLSSLLRLQKDPTLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRAKMFDEMEEI 137
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+Q++K E + F NVI YG A +A + +PS+ C +VK+ N +L L
Sbjct: 138 LQQLKQETRFAPHEVIFCNVIAFYGR-AHLPDRAFQVFERIPSFRCKRTVKSVNSLLAAL 196
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ + ++ ++ + G DAC NIL+ C G+L+A + V DE K+ +PNV
Sbjct: 197 LKNRQLEKMTQVFVDISNYGSP-DACTFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNV 255
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
T+ TL++GL ++EA L E M + I + + LI G G++ KL E
Sbjct: 256 VTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKE 315
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M SA Y ++ L R E +++ M P V+Y +I+G C +
Sbjct: 316 EMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKEN 375
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+E V+ +MV++G P + + I+G
Sbjct: 376 DLESAHRVMDEMVEKGCKPDVFSFNTIIG 404
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 5/211 (2%)
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
V++ + + L+ L ++G E +L E + C+P+ TY+ +++G C++ ++E A
Sbjct: 322 VKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAH 381
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+++ M +G D +FN +I L K+GK+++ M LLE M +GC P+ SY+ + GL
Sbjct: 382 RVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGL 441
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ + EA ++ MI + P S KL+ LC Q+ ++ W++ + +G M
Sbjct: 442 CEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLC-QECNMELLWMILNSLGRGNRMNM 500
Query: 374 GMWREIVGCVTFGKDNRNRVYVTETVDSLAS 404
MW +V V N + +DSL S
Sbjct: 501 DMWARVVAFVY----KENLSESSNLIDSLIS 527
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 86/153 (56%), Gaps = 4/153 (2%)
Query: 162 SVKTFNLVLNLLVSAKL-YG---EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
+VK + V + L+SA +G E+ I + G + D N ++ G C+ +LE+A
Sbjct: 321 NVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESA 380
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
V+DE ++ C+P+V +++T++ LC++G +++A LLE M G D +++ I+ G
Sbjct: 381 HRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDG 440
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
L + +++E +L+ M KG P + S +++
Sbjct: 441 LCEMMQLKEATSILDEMIFKGYVPRNESINKLV 473
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 105/242 (43%), Gaps = 4/242 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN ++YT +I + + + + + S + + ++ + GR +
Sbjct: 289 PNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKH--GRKEEVS 346
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M C P T+N ++N + + G + D N ++ L
Sbjct: 347 DILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWL 406
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G L+ A +L++ P++ C P+V +Y + GLCE ++EA +L+ M +G
Sbjct: 407 CKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRN 466
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ N L+ L ++ +E +L + G+G N + V+ + K+ E+ L+
Sbjct: 467 ESINKLVDRLCQECNMELLWMILNSL-GRGNRMNMDMWARVV-AFVYKENLSESSNLIDS 524
Query: 329 MI 330
+I
Sbjct: 525 LI 526
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 144/301 (47%), Gaps = 19/301 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK---VEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PNE Y +I+ L +A + D +++ ++ + +G + K AGR
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCK-----AGRFG 82
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL---- 201
A+ + C P + TFN++++ LV + E I+ S + + CL
Sbjct: 83 DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFES-----MHTSSQCLPNVV 137
Query: 202 --NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
++ GLC++G L+ A +LD + C PNV TYS L+ GLC+ G ++ F LL+ M
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G D + +N L++GL K +++E ++L++ M GCYP +Y ++ K+
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A L+ M P ++Y +I GLC ++D +LK+MV VP + + I
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTI 317
Query: 380 V 380
+
Sbjct: 318 I 318
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 145/344 (42%), Gaps = 44/344 (12%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q R+ + P+ +Y ++N L +++R D +++Q + + C + YN +
Sbjct: 193 LLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQ-LMIRSGC-YPTVVTYNSLMEL 250
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+ ++ +A + M C P V +N V+ L + Q + D
Sbjct: 251 FCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPD 310
Query: 198 ACCLNILLKGLCENG------NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
+ ++ GLC++ LEAA +L+ + C PN TY+ ++ GLC ++
Sbjct: 311 VITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQ 370
Query: 252 AFGLLERM--------------------ESEGIDA---------------DTVTFNILIS 276
A LL RM +S +DA + V + LI
Sbjct: 371 ALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALID 430
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
GL K G+V++ +++ E M + P A+Y VL GL R EA +V MI + P
Sbjct: 431 GLSKGGEVDKAVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFP 489
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
SY LI GLC VE+ + + + +GF +G++ +V
Sbjct: 490 DGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 138/299 (46%), Gaps = 11/299 (3%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q + P+ Y +I L + R D + +++++ + D Y+ I I
Sbjct: 263 LIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC--VPDVITYSTI-ID 319
Query: 138 G-------NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
G + ++ A E L M C P+ T+ +V+ L A+ + +
Sbjct: 320 GLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMI 379
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
V D ++++ LC++ +L+AA+ + ++ C+PN Y+ L+ GL + G V+
Sbjct: 380 DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVD 439
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A + E M E T+N ++ GL G++EE ++++E M K C+P+ ASY ++
Sbjct: 440 KAVRVFELM-VESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALI 498
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
GL EA EL + + + Y L++ LC +K + D V K+++ G+
Sbjct: 499 RGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 1/214 (0%)
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C P+ T+ +++ L A + + G+ N ++KGLC+ G A
Sbjct: 26 CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDAL 85
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-SEGIDADTVTFNILISG 277
C P++ T++ L+ L + G VEEAF + E M S + VT+ +I+G
Sbjct: 86 GYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVING 145
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L K GK++ ++LL+ M GC PN +Y ++ GL R + L+ M P
Sbjct: 146 LCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPD 205
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ Y L++GLC + +++ +++ M++ G P
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 36/193 (18%)
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI------------------- 264
F ++ C PN TY +L+HGLC+ G +++A+ LL+ M GI
Sbjct: 21 FREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGR 80
Query: 265 --DA--------------DTVTFNILISGLRKQGKVEEGMKLLERMKGKG-CYPNSASYQ 307
DA D +TFNIL+ L K G+VEE ++ E M C PN +Y
Sbjct: 81 FGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYT 140
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
V+ GL + A EL+ M P+ ++Y L+ GLC + +L++M ++
Sbjct: 141 TVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR 200
Query: 368 GFVPRMGMWREIV 380
GF P + M+ ++
Sbjct: 201 GFQPDVIMYNTLL 213
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 148/322 (45%), Gaps = 40/322 (12%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKD------YNPNEALYTLIINKLAQAKRFDA 109
+SP V FS L D + +++ D Y PN Y ++N L +A + +
Sbjct: 177 VSPDTV--TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 234
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLV 169
+++ + + + D Y+V+ A R+ +A+E L M S C P
Sbjct: 235 AHAMIESMVDKGV--TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP-------- 284
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
N+LV K+ NIL+ G C+ GN E A + +E +N
Sbjct: 285 -NVLVPDKVT---------------------FNILIAGACKAGNFEQASALFEEMVAKNL 322
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+P+V T+ L+ GLC+ G VE A +L+ M + G+ + VT+N L+ GL K G++EE +
Sbjct: 323 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 382
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
LE M GC P+S +Y ++Y L R +A +LV + P V+Y L+ GL
Sbjct: 383 FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 442
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
E VL++MV +G P
Sbjct: 443 KSGKTEQAITVLEEMVGKGHQP 464
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 5/283 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR----FSDGFFYNVIKIYGNM 140
K P+ Y+++++ +A R D +++ + + C D +N++
Sbjct: 245 KGVTPDVITYSVLVDAFCKASRVDEALELLHGM-ASRGCTPNVLVPDKVTFNILIAGACK 303
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG +A +M + N P V TF +++ L A + I LGV +
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ GLC++G +E A L+E C P+ TY +L++ LC ++A L+ ++
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S G D DTVT+NIL+ GL K GK E+ + +LE M GKG P+S ++ GL
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLA 483
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
EL+ ++ + M P + ++ +C ++DV ++K+
Sbjct: 484 GTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 155/364 (42%), Gaps = 46/364 (12%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDA----IEDIMQR 116
VL+ D + + R P Y IIN L ++ A E++++R
Sbjct: 7 VLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVER 66
Query: 117 ----------IKVEKLCRFSDGFFYNVIKIYGNMA---------------------GRIS 145
++ LC+ D +++G+M+ GRI
Sbjct: 67 GHHPDVVTYNTLIDSLCKAGD--LEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRID 124
Query: 146 KAIETLFDMPSYNC--WPSVKTFNLVLNLLVSAKLYGEIQGIYTSA--AKLGVEIDACCL 201
+A E + +M +C P++ T+N L+ L + E + S L V D
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 184
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L+ GLC+ G ++ A V D+ PNV TY+ L++GLC+ +E A ++E M
Sbjct: 185 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN-----SASYQEVLYGLLDK 316
+G+ D +T+++L+ K +V+E ++LL M +GC PN ++ ++ G
Sbjct: 245 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKA 304
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
F +A L M+ + + P +++ LI GLC VE +L M G P + +
Sbjct: 305 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 364
Query: 377 REIV 380
+V
Sbjct: 365 NALV 368
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
S L + K+ P+ + +I+ L +A + +A DI+ + L + YN +
Sbjct: 311 SALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG--NLGVPPNVVTYNALV 368
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
+GRI +A + L +M S C P T+ ++ L A + + + G +
Sbjct: 369 HGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD 428
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D NIL+ GL ++G E A VL+E + +P+ T++ GL GN+ L
Sbjct: 429 PDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMEL 488
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEE 286
L + ++G+ D T + ++ + + GK+++
Sbjct: 489 LRVVLAKGMLPDATTCSSILDWVCRSGKLDD 519
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 175/358 (48%), Gaps = 49/358 (13%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSK---RKDYNPNEALYTLIINKLAQAKRFDAIED 112
++P+++ K+ L P+ V + ++ + K ++ Y + +Y L+I+KL F I+
Sbjct: 59 ITPSQLCKL---LELPLDVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDK 115
Query: 113 IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCW-PSVKTFNLVLN 171
+++++K E C F + F +++ YG AG +A L DM C+ P+ K++N+VL
Sbjct: 116 LLKQMKDEG-CVFKESLFILIMRYYGK-AGLPGQATRLLLDMWGVYCFEPTFKSYNVVLE 173
Query: 172 LLVSAK--------LYGEI-QGIYTSAAKLGV---------EIDACC------------- 200
+LV+ Y + +GI + GV E+D+ C
Sbjct: 174 ILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVP 233
Query: 201 ----LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+L+ L EN + A +L+E CEP+V+T++ ++HGLC+ G + EA L
Sbjct: 234 NSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLH 293
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+RM AD + L+ GL + GKV+E +L ++ PN+ Y ++ G +
Sbjct: 294 DRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVS 349
Query: 317 KRFPEAKELVGR-MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
RF EAK+L+ + M+ P ++ +I GLC + + L +MV++GF P +
Sbjct: 350 GRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNV 407
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 148/294 (50%), Gaps = 3/294 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGRISK 146
NPN LY +IN + RF+ +D++ + V + F D F +N++ G +
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMV--IAGFEPDAFTFNIMIDGLCKKGYLVS 390
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+E L +M P+V T+ ++++ + E + S + G+ ++ N L+
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIG 450
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC++G ++ A + E + C+P++ T+++L++GLC+ +EEA GL M EG+ A
Sbjct: 451 ALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+TVT+N LI + +++ KL+ M+ +GC ++ +Y ++ L + L+
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLI 570
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+M E + PS S LI+ C V D L+ M+Q+G P + + ++
Sbjct: 571 EQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 169/354 (47%), Gaps = 48/354 (13%)
Query: 56 LSPTE-----VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
+SPT V+K F + + S S+L +K PN +Y ++I+ L++ R +
Sbjct: 196 ISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCV-PNSIIYQMLIHALSENNRVNEA 254
Query: 111 EDIMQRI--------------KVEKLCRFSDGFFYNVIKIYGNM---------------- 140
+++ + + LC+ G + K++ M
Sbjct: 255 MKLLEEMFLMGCEPDVQTFNDVIHGLCK--AGRIHEAAKLHDRMLLRDFTADALIQGYLM 312
Query: 141 -----AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI-YTSAAKLGV 194
G++ +A L +P+ P+ +N ++N V + + E + + Y + G
Sbjct: 313 HGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E DA NI++ GLC+ G L +A LDE K+ EPNV TY+ L+ G C++G+ EEA
Sbjct: 369 EPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASK 428
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
++ M ++G+ +TV +N LI L K GK+++ +++ M KGC P+ ++ ++YGL
Sbjct: 429 VVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLC 488
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ EA L M+ E + + V+Y LIH +L++ D ++ +M +G
Sbjct: 489 KNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRG 542
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 3/309 (0%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+S + L++ K K + PN YT++I+ + F+ ++ + + L + G Y
Sbjct: 389 VSALEFLDEMVK-KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG--Y 445
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + G+I A++ +M S C P + TFN ++ L E G+Y
Sbjct: 446 NCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL 505
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
GV + N L+ ++ A ++ E + C + TY+ L+ LC+ G E+
Sbjct: 506 EGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEK 565
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
GL+E+M E I + NILI+ + GKV + ++ L M +G P+ +Y ++
Sbjct: 566 CLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLIN 625
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
GL RF EA L + + + P V+Y LI C + L D +L K V GF+P
Sbjct: 626 GLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIP 685
Query: 372 RMGMWREIV 380
W ++
Sbjct: 686 NEITWSILI 694
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 6/201 (2%)
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS----DGFFYNVIKIYGNMAGRISKAIET 150
T+ N L A F +E I Q K+ RF D YN + G K +
Sbjct: 512 TVTYNTLIHA--FLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGL 569
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
+ M +PS+ + N+++N + + G+ D N L+ GLC+
Sbjct: 570 IEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCK 629
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G + A + + + P+ TY+TL+ C +G +A LL + S G + +T
Sbjct: 630 MGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEIT 689
Query: 271 FNILISGLRKQGKVEEGMKLL 291
++ILI+ K E +L
Sbjct: 690 WSILINYFVKNNSDSEQFTIL 710
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 147/303 (48%), Gaps = 39/303 (12%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ YT +I + K D ++ I +K C+ ++ + N+I AGRI++A
Sbjct: 226 HPDTFTYTSLILGHCRNKGVDNAYEVF-LIMPQKGCQRNEVSYTNLIHGLCE-AGRINEA 283
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ DM NC P+V+T+ +L+
Sbjct: 284 LKLFADMTEDNCCPTVRTYT-----------------------------------VLIYA 308
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L +G A + +E ++ CEPNV TY+ L+ GLC++ ++EA +L M +G+
Sbjct: 309 LSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPS 368
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+N LI G K+G +++ ++L+ M+ C PN+ +Y E++ GL K++ +A L+
Sbjct: 369 VVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLN 428
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
+M+ ++SPS ++Y LIHG C +E +L M + G VP W V T K
Sbjct: 429 KMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVP--DQWTYSVFIDTLCK 486
Query: 388 DNR 390
+ R
Sbjct: 487 EGR 489
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 164/365 (44%), Gaps = 40/365 (10%)
Query: 75 ISVLNQYS--KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ LN ++ K K PN YT++I+ L + + D ++ + + L YN
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL--IPSVVTYN 373
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ G I A E L M S +C P+ +T+N ++ L + + + +
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
+ N L+ G C+ +LE+A+ +L + P+ TYS + LC++G VEEA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L + ++++G+ A+ V + LI G K GK++ LLERM C PNS +Y ++ G
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLI--------------------------- 345
L +K+ EA LV +M+ + P+ V+Y LI
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613
Query: 346 --------HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVT 396
H +Q ++E+VD V+ KM ++G +P + + ++ G G +R ++
Sbjct: 614 VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673
Query: 397 ETVDS 401
VD+
Sbjct: 674 CMVDT 678
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 144/327 (44%), Gaps = 37/327 (11%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
NE YT +I+ L +A R + + + + C + + + G +GR +A+
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSG--SGRKVEALN 320
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+M C P+V T+ ++++ L E + + + ++ G+ N L+ G C
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G ++ AF +LD +C PN RTY+ L+ GLC+K V +A LL +M + +
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI 440
Query: 270 TFNILISG-----------------------------------LRKQGKVEEGMKLLERM 294
T+N LI G L K+G+VEE L + +
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV 500
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
K KG N Y ++ G + A L+ RM+ + P+ +Y LI GLC +K +
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIVG 381
++ ++ KM+ G P + + ++G
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIG 587
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 147/326 (45%), Gaps = 16/326 (4%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L+P+ V +F+ DP + +S N + R + N Y+ ++N L +A+ E I
Sbjct: 66 LTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKI-- 123
Query: 116 RIK-VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
RI ++ C D F V++++ M + P+++ +N +L L
Sbjct: 124 RISMIKSCCSIEDVLF--VLEVFRKMNAD-----------GEFKFKPTLRCYNTILMSLS 170
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
L E++ +Y + + N ++ G C+ GN+ A + + P+
Sbjct: 171 KFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTF 230
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TY++L+ G C V+ A+ + M +G + V++ LI GL + G++ E +KL M
Sbjct: 231 TYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
C P +Y ++Y L R EA L M + P+ +Y LI GLC + +
Sbjct: 291 TEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKM 350
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
++ +L +M ++G +P + + ++
Sbjct: 351 DEARKMLSEMSEKGLIPSVVTYNALI 376
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P T+++ ++ L E ++ S GV+ + L+ G C+ G ++ A+ +
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L+ C PN TY+ L+ GLC++ ++EA L+ +M + G+ VT+ ILI + K
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G + +K+ M G P+ +Y L+ + E +++ +M E + P V+
Sbjct: 592 DGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
Y LI G L LK MV G P +
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSL 684
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 132/316 (41%), Gaps = 20/316 (6%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K NE +YT +I+ + + D +++R+ + C + + YNV+
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM-LNDAC-LPNSYTYNVLIEGLCKEK 558
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A + M + P+V T+ +++ ++ + ++ LG + D C
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L G LE V+ + ++ P++ TY+ L+ G G AF L+ M
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678
Query: 263 GIDADTVTFNILISGLRKQGKVEE------------------GMKLLERMKGKGCYPNSA 304
G +ILI L + +++E +KL E+M GC + +
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVS 738
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
Y ++ G ++R EA+ LV M MSPS Y L+ C + + ++ M
Sbjct: 739 IYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAM 798
Query: 365 VQQGFVPRMGMWREIV 380
V+ G +P + ++ +V
Sbjct: 799 VENGLLPLLESYKLLV 814
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 122/285 (42%), Gaps = 19/285 (6%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ YT ++ + ++D++ ++ E + D Y V+ G +
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI--LPDLVTYTVLIDGYARLGLTHR 667
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A + L M C PS+ ++++ L E + +++G++
Sbjct: 668 AFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR------SEIGID----------- 710
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
+ E A + ++ + C +V Y L+ G C++ +EEA GL+ M+ G+
Sbjct: 711 SVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP 770
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+N L+ K G E ++L++ M G P SY+ ++ GL + +AK +
Sbjct: 771 SEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVF 830
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ + V++K LI GL + LV++ ++ M ++G P
Sbjct: 831 HGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQP 875
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%)
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A++ M + C V + ++ + E QG+ + G+ N LL
Sbjct: 721 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 780
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
C+ G A ++D + P + +Y L+ GL +G+ E+A + + S G +
Sbjct: 781 CCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNY 840
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
D V + +LI GL K+ V+E +L++ M+ KGC PN +Y ++ GL
Sbjct: 841 DEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 143/283 (50%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +++ + + + +++ ++ E + YNV+ G + A+
Sbjct: 40 PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGC--TPNNVTYNVLMDGMCGEGDVDDAL 97
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L ++PS+ C PS +N VL L SA+ +G+ + T + + N+++ L
Sbjct: 98 ELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSL 157
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G L+ A +L++ K C N+ TY+ +++GLCE+ NV+ A GLL +M+S G D
Sbjct: 158 CRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDI 217
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N L+ GL + + +L++ M GC P++ ++ ++ L K +A E+ +
Sbjct: 218 VTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQ 277
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + +P+ ++Y +I GL ++ + +M +GF P
Sbjct: 278 MPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNP 320
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 35/274 (12%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ A+ L DM C P V T+N++L + Y + + G +
Sbjct: 21 GQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTY 80
Query: 202 NILLKGLCENGNLEAAFYVLDEFP-----------------------------------K 226
N+L+ G+C G+++ A +L P +
Sbjct: 81 NVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLR 140
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+NC PN T++ +++ LC KG +++A LLE+M G A+ VT+N +I+GL +Q V+
Sbjct: 141 ENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDG 200
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
M LL +MK GC P+ +Y +L GL R+ +A+EL+ M P V++ LI
Sbjct: 201 AMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIG 260
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LC + L+ D V K+M +G P + I+
Sbjct: 261 FLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII 294
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 104/187 (55%)
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
V+ +A N L+ LCE G + A VLD+ + C P+V TY+ L+ C+ +A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L++ M +EG + VT+N+L+ G+ +G V++ ++LL + GC P++ +Y VL GL
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+R+ +A ELV M+ E P+ ++ +I+ LC + L++ +L+KM + G +
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 374 GMWREIV 380
+ I+
Sbjct: 183 VTYNAII 189
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 137/283 (48%), Gaps = 3/283 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L A+R+ ++++ + E C ++ F NV+ G + +AI
Sbjct: 110 PSTVNYNTVLKGLCSAERWGDADELVTEMLREN-CPPNEATF-NVVIYSLCRKGLLQQAI 167
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L M + C ++ T+N ++N L + G+ + G + D N LLKGL
Sbjct: 168 QLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGL 227
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C A ++D + C P+ T++TL+ LC+KG + +A + ++M +G ++
Sbjct: 228 CSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNS 287
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ +ISGL K K+++ ++L M KG P+ YQ + L D EA + V +
Sbjct: 288 ITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRK 346
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +SP V Y ++ GLC E ++ MV G +P
Sbjct: 347 LQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMP 389
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 39/285 (13%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R++ PNEA + ++I L + +++ K+ K ++ YN I I G R
Sbjct: 140 RENCPPNEATFNVVIYSLCRKGLLQQAIQLLE--KMSKHGCTANIVTYNAI-INGLCEQR 196
Query: 144 -ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A+ L M SY C P + T+N +L L SA + + + + + + G D N
Sbjct: 197 NVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFN 256
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE----------------K 246
L+ LC+ G + A V + P + C PN TYST++ GL + K
Sbjct: 257 TLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHK 316
Query: 247 G------------------NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
G +EEA + +++ GI TV +N ++ GL + GK E +
Sbjct: 317 GFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAI 376
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
++ M GC P+ +Y ++ GL + EA+EL+ ++ C R
Sbjct: 377 DIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL-CSR 420
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 7/255 (2%)
Query: 64 IFSNLRDPISVISVLNQYSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK 121
I + L + +V + SK K Y P+ Y ++ L A R+ E++M + +
Sbjct: 188 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNM-TQN 246
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
C D +N + + G + AIE MP C P+ T++ +++ L A +
Sbjct: 247 GC-LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQ 305
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
++ G D +L + L ++ +E A + + P+ Y+ ++
Sbjct: 306 ALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILL 364
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GLC G E A ++ M S G D +T+ ILI GL +G + E +LL ++ +
Sbjct: 365 GLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLV 424
Query: 302 NSASYQEVLYGLLDK 316
NS E L LLD+
Sbjct: 425 NSLIKSEAL--LLDQ 437
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A R++ A E + M C+P+ FN +++ L E G + +GV
Sbjct: 23 ANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETMRSMGVSPTIVT 82
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ G C+ L A +L E + EPN TY+T +HGLC+ G V++A L M
Sbjct: 83 YNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMT 142
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ I D + LI GL + GK+ E LL+ M+ GC P Y +L L R
Sbjct: 143 EKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRIN 202
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA +L RM + P ++++ ++ G C ++D +L++M G PR ++ ++
Sbjct: 203 EAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLI 262
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
IL+ GLC+ L AF +++ ++ C PN ++ +M LC++G EA+G +E M
Sbjct: 13 FGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETMR 72
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S G+ VT+NILI G K+ K+ +++L+ M G+G PN +Y L+GL +
Sbjct: 73 SMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVD 132
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A L M +++ Y LI GLC + + +L +M G VP+ G + I+
Sbjct: 133 DALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAIL 192
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 4/284 (1%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P + ++++ L +A R DA E + + E+ C F + +N I GR ++A
Sbjct: 8 PTVVTFGILVDGLCKANRLTDAFE--LVEVMAERGC-FPNALVFNGIMDALCKEGRSAEA 64
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ M S P++ T+N++++ + I G E + N L G
Sbjct: 65 YGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHG 124
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G ++ A + ++ +V Y+TL+ GLC+ G + EA+ LL+ ME+ G
Sbjct: 125 LCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPK 184
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+N ++S L K ++ E KL +RM G G P+ ++ +++G R +A L+
Sbjct: 185 PGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQ 244
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+M ++P V Y LI L V + +L++M+ +G P
Sbjct: 245 QMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSP 288
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A+E L +M P+ T+N L+ L + ++ + + + +D
Sbjct: 95 KLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYT 154
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC+ G L A+ +LDE C P Y+ ++ LC+ + EA L +RM
Sbjct: 155 TLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGS 214
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI D +TF +++ G + ++++ + LL++MK G P Y ++ L R EA
Sbjct: 215 GILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEA 274
Query: 323 KELVGRMICERMSPSFVSY 341
L+ MI +SP+ +Y
Sbjct: 275 YRLLQEMISRGLSPNSRTY 293
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ A+ M V + +++ L A E + G C
Sbjct: 129 GKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCY 188
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L LC+ + A + P+ T+ ++ G C +++A LL++M+S
Sbjct: 189 NAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKS 248
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G+ V +N LI L + G+V E +LL+ M +G PNS +Y
Sbjct: 249 AGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY 293
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 7/208 (3%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ +L + + R + PN Y ++ L + + D + R EK R D + Y
Sbjct: 99 ALEILQEMTGR-GHEPNHVTYNTFLHGLCKYGKVDDALALF-RAMTEKKIRL-DVYGYTT 155
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ AG++++A L +M + C P +N +L+ L E ++ G
Sbjct: 156 LIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSG 215
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ D +++ G C ++ A +L + P Y+TL+ L G V EA+
Sbjct: 216 ILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAY 275
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQ 281
LL+ M S G+ ++ T+ + +RKQ
Sbjct: 276 RLLQEMISRGLSPNSRTYAL----MRKQ 299
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 158/326 (48%), Gaps = 30/326 (9%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD---GFF----------- 130
+ + P++ Y ++N L + R DA +D+ RI ++ F+ GF
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 131 -------YNVIK--------IYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
Y ++ IYG G + A+E L DM + C P+V ++ ++++
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E + + G++ + N L+ C+ + A + E P++ C+P+V
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T+++L+ GLCE ++ A LL M SEG+ A+TVT+N LI+ ++G+++E KL+ M
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+G + +Y ++ GL +A+ L +M+ + +PS +S LI+GLC +V
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
E+ K+MV +G P + + ++
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLI 641
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 161/340 (47%), Gaps = 24/340 (7%)
Query: 52 HKDWLSPTEVLKIFSNLRDPISVISVLNQYS---KRKDYNPNEALYTLIINKLAQAKRFD 108
HK ++P ++ K+ L P++V + + +S + Y + +Y ++I KL F
Sbjct: 74 HK--ITPFQLYKL---LELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFK 128
Query: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFN 167
I+ ++ ++K E + F + F ++++ Y + AG + + +M + Y+C P+ K++N
Sbjct: 129 TIDRLLIQMKDEGIV-FKESLFISIMRDY-DKAGFPGQTTRLMLEMRNVYSCEPTFKSYN 186
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+VL +LVS + ++ + +++K C +++A +L + K
Sbjct: 187 VVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH 246
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
C PN Y TL+H L + V EA LLE M G D TFN +I GL K ++ E
Sbjct: 247 GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 306
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
K++ RM +G P+ +Y ++ GL R AK+L R+ P V + LIHG
Sbjct: 307 AKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHG 362
Query: 348 LCNQKLVEDVDWVLKKMVQQ-GFVPRM--------GMWRE 378
++D VL MV G VP + G W+E
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 2/294 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ K PN YT++++ + + D +++ + + L + GF N +
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF--NCLISAFCKEH 473
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI +A+E +MP C P V TFN +++ L + GV + N
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G ++ A +++E Q + TY++L+ GLC G V++A L E+M +
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G ++ NILI+GL + G VEE ++ + M +G P+ ++ ++ GL R +
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ ++ E + P V++ L+ LC V D +L + ++ GFVP W
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 8/311 (2%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
V+K F + + S +S+L +K PN +Y +I+ L++ R + +++ + +
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCV-PNSVIYQTLIHSLSKCNRVNEALQLLEEMFL- 280
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+ D +N + + RI++A + + M P T+ ++N L
Sbjct: 281 -MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL-DEFPKQNCEPNVRTYSTL 239
+ ++ K + I N L+ G +G L+ A VL D P+V TY++L
Sbjct: 340 AAKDLFYRIPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
++G ++G V A +L M ++G + ++ IL+ G K GK++E +L M G
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
PN+ + ++ + R PEA E+ M + P ++ LI GLC ++ W
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 360 VLKKMVQQGFV 370
+L+ M+ +G V
Sbjct: 516 LLRDMISEGVV 526
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 143/284 (50%), Gaps = 4/284 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ VL++ +R+ Y P+ YT++I ++ ++ +K C+ D YNV+
Sbjct: 229 MEVLDRQMQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMR-KKGCK-PDVVTYNVL 285
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
GR+ +AI+ L +MP Y C P+V T N++L + S + + + + + G
Sbjct: 286 INGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGC 345
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
NIL+ LC L A VL++ PK C PN +Y+ L+HG C++ ++ A
Sbjct: 346 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIE 405
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LE M S G D VT+N L++ L K GK + +++L ++ KGC P +Y V+ GL
Sbjct: 406 YLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLT 465
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL-CNQKLVEDV 357
+ A EL+ M + + P ++Y L+ GL C K+ E +
Sbjct: 466 KVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAI 509
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 144/295 (48%), Gaps = 4/295 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
++K P+ Y ++IN + + R D + + + C+ + +N+I G
Sbjct: 271 RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYG-CQ-PNVITHNIILRSMCSTG 328
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R A L DM C PSV TFN+++N L +L G + K G ++ N
Sbjct: 329 RWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYN 388
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
LL G C+ ++ A L+ + C P++ TY+TL+ LC+ G + A +L ++ S+
Sbjct: 389 PLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK 448
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G +T+N +I GL K GK E +LLE M+ KG P+ +Y +L GL + + EA
Sbjct: 449 GCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEA 508
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVLKKMVQQGFVPRMGMW 376
++ M + PS V+Y ++ GLC Q+ +D+ L MV++G P +
Sbjct: 509 IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDF-LAYMVEKGCKPTKATY 562
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 6/300 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++I ++ D +++R+ V D YN I +G++ +A+
Sbjct: 175 PDVITYNVLIGGYCKSGEIDKALQVLERMSVA-----PDVVTYNTILRSLCDSGKLKEAM 229
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L C+P V T+ +++ + G+ + K G + D N+L+ G+
Sbjct: 230 EVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 289
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G L+ A L+ P C+PNV T++ ++ +C G +A LL M +G
Sbjct: 290 CKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSV 349
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VTFNILI+ L ++ + + +LE+M GC PNS SY +L+G +K+ A E +
Sbjct: 350 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
M+ P V+Y L+ LC + +L ++ +G P + + ++ G GK
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 32/211 (15%)
Query: 193 GVEIDACCLNILLKG--------------------------------LCENGNLEAAFYV 220
G D N+L+ G LC++G L+ A V
Sbjct: 172 GAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEV 231
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
LD ++ C P+V TY+ L+ C V +A LL+ M +G D VT+N+LI+G+ K
Sbjct: 232 LDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 291
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G+++E +K L M GC PN ++ +L + R+ +A+ L+ M+ + SPS V+
Sbjct: 292 EGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVT 351
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ LI+ LC ++L+ VL+KM + G +P
Sbjct: 352 FNILINFLCRKRLLGRAIDVLEKMPKHGCMP 382
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 3/170 (1%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NI L+ L NG LE L+ Q P+V ++L+ G C G +A ++E +E+
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D +T+N+LI G K G++++ +++LERM P+ +Y +L L D + E
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKE 227
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A E++ R + P ++Y LI CN V +L +M ++G P
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKP 277
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 87/168 (51%), Gaps = 3/168 (1%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++G C +G A +++ P+V TY+ L+ G C+ G +++A +LERM
Sbjct: 148 LIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS--- 204
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D VT+N ++ L GK++E M++L+R + CYP+ +Y ++ + +A
Sbjct: 205 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAM 264
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L+ M + P V+Y LI+G+C + +++ L M G P
Sbjct: 265 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQP 312
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 4/191 (2%)
Query: 89 PNEALYTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN Y +++ Q K+ D AIE + I V + C + D YN + G+ A
Sbjct: 382 PNSLSYNPLLHGFCQEKKMDRAIEYL--EIMVSRGC-YPDIVTYNTLLTALCKDGKADAA 438
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E L + S C P + T+N V++ L + + G++ D + LL+G
Sbjct: 439 VEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRG 498
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L G ++ A + + + +P+ TY+ +M GLC+ A L M +G
Sbjct: 499 LGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPT 558
Query: 268 TVTFNILISGL 278
T+ ILI G+
Sbjct: 559 KATYTILIEGI 569
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 161/379 (42%), Gaps = 76/379 (20%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VE 120
I++ Q + Y P+ Y +I+ L + +R D+ + + ++
Sbjct: 15 ITLFKQMVDKAIY-PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMID 73
Query: 121 KLCRFSDGFFYNVIKIYGNMA----------------------GRISKAIETLFDMPSYN 158
LC+ G N + +Y +MA + K + L +M
Sbjct: 74 GLCKC--GRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRG 131
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C P+ T+N ++N L+ E + A G + +++KGLC+ G +EAAF
Sbjct: 132 CAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAF 191
Query: 219 YVLDEF--------P-----------------------------KQNCEPNVRTYSTLMH 241
V+DE P ++ C PNV TYSTL+
Sbjct: 192 RVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLID 251
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GL + ++EA LL +M G A+TVT++ ++ GL K G++E+ + +L +M+ GC P
Sbjct: 252 GLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP 311
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
++ +Y ++ G ++R EA L+ M+ PS V+Y L HGLC ++ +L
Sbjct: 312 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 371
Query: 362 KKMVQQGFVPRMGMWREIV 380
M +G P + IV
Sbjct: 372 DYMAARGCAPNAITYSSIV 390
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 3/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y+ +I+ L++ + D ++ ++ VE CR + + V+ + GR+ A+
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKM-VELGCRANTVTYSTVVDGLLKV-GRMEDAV 298
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M C P T+N +++ + E G+ + G L GL
Sbjct: 299 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 358
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ESEGIDAD 267
C +G + A +LD + C PN TYS+++ GLC+ G V EA G E+M E +
Sbjct: 359 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 418
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+ ++ LI GL K GK++E + LERM G P+ ++ ++ GL D R EL
Sbjct: 419 VIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFR 478
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M P V+Y L+ LC V++ + ++M G P R ++
Sbjct: 479 GMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMI 531
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 143/294 (48%), Gaps = 3/294 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ + +++ L + +R ++ +R +E+ CR + + +I MA ++ +A
Sbjct: 205 SPDVITFNSVLDGLCKEQRILDAHNVFKR-ALERGCRPNVVTYSTLIDGLSKMA-KMDEA 262
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ L M C + T++ V++ L+ + + G DA N L+ G
Sbjct: 263 LQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDG 322
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ L A +L E + P+V TY+TL HGLC G +EA +L+ M + G +
Sbjct: 323 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 382
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+T++ ++ GL K G+V E + E+M + + P+ +Y ++ GL + EA E +
Sbjct: 383 AITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFL 442
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
RMI P V++ LI+GLC+ ++ + + M ++G VP M + +V
Sbjct: 443 ERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLV 496
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 3/241 (1%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ KAI M +P V T+ +++ L + E ++ A G N
Sbjct: 10 KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYN 69
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++ GLC+ G +E A + D+ P V TYSTL+ GLC V++ LLE M
Sbjct: 70 TMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAG 129
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + VT+N L++ L QG+ +E LLE+M GC P ++ ++ GL +
Sbjct: 130 RGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEA 189
Query: 322 AKELVGR--MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A +V MI +SP +++ ++ GLC ++ + D V K+ +++G P + + +
Sbjct: 190 AFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTL 249
Query: 380 V 380
+
Sbjct: 250 I 250
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 1/186 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV-EIDAC 199
+GR +A+E L M + C P+ T++ +++ L A E G + A+ V
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 420
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+ L+ GLC+ G ++ A+ L+ + P+V T+S L++GLC+ G ++ L M
Sbjct: 421 AYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGM 480
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G D VT+ L+ L + +V+E L ++M+ G P+ ++ + +++GLL+ R
Sbjct: 481 AERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRD 540
Query: 320 PEAKEL 325
+AK +
Sbjct: 541 EDAKRI 546
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 38/206 (18%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ GLC++ ++ A + + + P+V TY L+ GL ++ V+EA+ L E ++G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 264 IDADTVTFNILISGLRKQGKVE------------------------------------EG 287
VT+N +I GL K G++E +G
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
KLLE M G+GC PN+ +Y ++ LL + R EA L+ +M P +++ +I G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 348 LCNQKLVEDVDWVLKK--MVQQGFVP 371
LC + +E V+ + M++ G P
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSP 206
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++ GLC+ V++A L ++M + I D VT+ LI GL KQ +V+E L E + KG
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRM-ICERMSPSFVSYKKLIHGLCNQKLVEDV 357
C+P +Y ++ GL R A L M I P+ V+Y LI GLC V+
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 358 DWVLKKMVQQGFVPRMGMWREIV 380
+L++M +G P + +V
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLV 143
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 9/291 (3%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++N +A DA ++ + D F YN + + G + A+ D
Sbjct: 131 YNTMVNGYCRAGNIDAARRMIDSVPFAP-----DTFTYNPLIRALCVRGCVLDALAVFDD 185
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M C PSV T++++L+ Y + + G E D N+L+ +C G+
Sbjct: 186 MLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGD 245
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A VL+ P C+P+ TY+ ++ LC EEA LL +M S D VTFN
Sbjct: 246 VGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNA 305
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA----KELVGRM 329
+I+ L ++G V K+L +M GC P+ +Y ++ GL ++R EA KEL+ M
Sbjct: 306 VITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEM 365
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P V++ +I LC + L + V+ +M + G +P + + IV
Sbjct: 366 VSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIV 416
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 136/303 (44%), Gaps = 11/303 (3%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
++ + + V++ L Y + P+ YT ++ L ++R++ + ++ ++
Sbjct: 245 DVGEALKVLNSLPSYGCK----PDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDC--AP 298
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE----I 182
D +N + G + +A + L M + C P + T++ +++ L + E +
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ + D N ++ LC+ G + A V+DE + C P++ TY+ ++ G
Sbjct: 359 KELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDG 418
Query: 243 -LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
LC+ EEA LL M S G+ DT T+ L GL ++ ++E + + R++ G P
Sbjct: 419 FLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSP 478
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ Y +L GL K R A + M+ P +Y L+ G+ + +E+ +L
Sbjct: 479 DKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELL 538
Query: 362 KKM 364
+
Sbjct: 539 GNL 541
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 35/202 (17%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEP------------------------------ 231
N L+GL + G L+ A ++ +P
Sbjct: 65 NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGP 124
Query: 232 --NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+ TY+T+++G C GN++ A ++ +S DT T+N LI L +G V + +
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRMI---DSVPFAPDTFTYNPLIRALCVRGCVLDALA 181
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+ + M +GC P+ +Y +L + + +A L+ M + P V+Y LI+ +C
Sbjct: 182 VFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMC 241
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
+Q V + VL + G P
Sbjct: 242 SQGDVGEALKVLNSLPSYGCKP 263
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 147/290 (50%), Gaps = 4/290 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +II+ +A+ + ++ ++E+L Y+ I G +SKA+
Sbjct: 96 PNVVSYNIIIDGYCKARNIEKALAFLR--EMEELGHPPTPHAYSSIVQSFCKTGNVSKAM 153
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +MP+ C P + FN++L+ L A+ E + ++ S G + D N ++ GL
Sbjct: 154 DVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGL 213
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ L+ A ++L+ +++ P TY+TL+ LC+ +++A+ + E+M
Sbjct: 214 CKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTE 273
Query: 269 VTFN--ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
++ ILI+GL K + E ++ + M+G+G P +Y +L GLL + +A EL
Sbjct: 274 PAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELT 333
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
M+ + +P+ +Y+ LI LC VE+ +L M +GFVP + +W
Sbjct: 334 YFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIW 383
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 126/276 (45%), Gaps = 17/276 (6%)
Query: 98 INKLAQAKRFDAIEDIMQRIK-------VEKLCRFSDGFFYNVIKIYGNMAGRISKAIET 150
I KL +A E I++ +K V+ C GFF +G +
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFF---------KSGSFQRGCSQ 51
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
L M +P+ +N +++ L A + E + Y + NI++ G C+
Sbjct: 52 LDRMLEAGLFPNAILYNNLISCLCKAGMLAEAES-YLKRMPQHCAPNVVSYNIIIDGYCK 110
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
N+E A L E + P YS+++ C+ GNV +A + M ++G + D V
Sbjct: 111 ARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVN 170
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
FN+L+SGL + K+ E +L M +GC P+ +Y ++ GL K+ EA L+ RM
Sbjct: 171 FNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMK 230
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
E +SP+FV+Y LI LC ++ V +KM +
Sbjct: 231 QEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAE 266
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 14/287 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-YNVIKIYGNMAGRISKA 147
P+ Y +I L + K+ D +++R+K E + S F Y + + R+ +A
Sbjct: 201 PDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDV---SPTFVTYTTLIDHLCKFARLQQA 257
Query: 148 IETLFDMPSYNCWPSVKTFN--LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
E M C + ++ +++N L A+ GE + ++ G+ N LL
Sbjct: 258 YEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLL 317
Query: 206 KGLCENGNLEAA----FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+GL L+ A +++LD+ P PN+ TY L+ LC+ VEEAF LL M
Sbjct: 318 EGLLSTAKLQDAMELTYFMLDQVPA----PNMFTYEILISSLCKTDQVEEAFKLLSAMRD 373
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G + +L+S L + G++++ +L + M C S +L G+L + E
Sbjct: 374 KGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDE 433
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
AK+ + +M + P +Y KL+ GLC Q + +++++V+ G
Sbjct: 434 AKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 151/307 (49%), Gaps = 11/307 (3%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAK--RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
S R + P + L ++ +LA + + +++ R++ RFS+ V+ +
Sbjct: 38 STRPAFPPPQPLLFHLLRRLATSSPSHLPCLLNLLPRLRHRP--RFSESAALVVLSAFSR 95
Query: 140 MAGRISKAIETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA--KLGVEI 196
A A++ +PS C P +++ N +L+ V A+ + + + S + G I
Sbjct: 96 -AIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRI 154
Query: 197 --DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ NI+L+ LC G+L+ A + D ++ P+ TYSTLM GL ++ ++ A
Sbjct: 155 APNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALD 214
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGL 313
LL+ M G+ D V +N L+ G K G+ E+ M++ +++ K G PN A+Y +L GL
Sbjct: 215 LLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGL 274
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
RF E E+ RM+ + P ++Y LIHGLC V+ V ++++ G V
Sbjct: 275 CKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDA 334
Query: 374 GMWREIV 380
M+ +V
Sbjct: 335 AMYNSLV 341
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 147/309 (47%), Gaps = 6/309 (1%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
V+ V ++ K PN A Y ++++ L + RF + ++ +R+ L D Y +
Sbjct: 247 VMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNL--QPDVITYGI 304
Query: 134 IKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ I+G +G + A ++ +N ++ A E + SA
Sbjct: 305 L-IHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFA 363
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEE 251
G+ + NI++KGL ++G ++ A + D K C P+ T+ TL+HGLC+ G +
Sbjct: 364 GLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANK 422
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
AF + E G D +++ +I+GL G++ + +K+ E+M GC PNS Y ++
Sbjct: 423 AFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALIS 482
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G R +A + +M SP+ ++Y LI GLC + ++ V ++MV+ GF P
Sbjct: 483 GFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTP 542
Query: 372 RMGMWREIV 380
+ + ++
Sbjct: 543 DITTYGSLI 551
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 138/300 (46%), Gaps = 11/300 (3%)
Query: 89 PNEALYTLIINKLAQA----KRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
P+ + +I+ L Q K F E+ R+ ++L FS + ++I N+ GR+
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEE--ARVSGKQLDVFS---YSSMINGLCNV-GRL 455
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A++ M C P+ +N +++ + IY+ A G N L
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTL 515
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+ + A V E + P++ TY +L+ GL +++A + +++ +G+
Sbjct: 516 IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMK-GKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D + NILI GL GKV+E + + MK K C PN +Y ++ GL + +A
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
L + + + P +SY I GLC+ + + +L +++ +G +P + W +V V
Sbjct: 636 TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAV 695
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 3/233 (1%)
Query: 141 AGRISKAIETLFDM--PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
+G + +AIE L+D+ C P TF +++ L + I+ A G ++D
Sbjct: 381 SGMVDEAIE-LWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDV 439
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+ ++ GLC G L A V ++ K C+PN Y+ L+ G C+ +A + +
Sbjct: 440 FSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSK 499
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G +T+N LI GL K K +E + M G P+ +Y ++ GL K+
Sbjct: 500 MADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKK 559
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A + +++ + + + + LIHGLC+ V++ V M ++ P
Sbjct: 560 IDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCP 612
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 147/287 (51%), Gaps = 3/287 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE-KLCRFSDGFFYNVIKIYGNMAGRIS 145
+ N Y I+ KL++A+ FD +E +M ++ + + F ++++ YG +AGR
Sbjct: 77 FTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYG-LAGRYE 135
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY-TSAAKLGVEIDACCLNIL 204
++ +P + SV++ N +LN+L+ + + + ++ S G+ + N+L
Sbjct: 136 SSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLL 195
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+K LC+ ++E+A+ VLDE P PN+ TY+T++ G +G++E A +LE M G
Sbjct: 196 VKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGW 255
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+ +L+ G K G+ E +++ M+ PN +Y ++ L +K+ EA+
Sbjct: 256 YPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARN 315
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ M+ P K+I LC V++ + +KM++ +P
Sbjct: 316 MFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 362
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 114/262 (43%), Gaps = 42/262 (16%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR--FSDGFFYNVIKIYGNMAGRISK 146
PN YT I+ ++ + +++ E L R + D Y V+ GR S+
Sbjct: 222 PNLVTYTTILGGYVARGDMESAKRVLE----EMLDRGWYPDAITYTVLMDGYCKLGRFSE 277
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA--CC---- 200
A + DM P+ T+ +++ L K GE + ++ D+ CC
Sbjct: 278 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVID 337
Query: 201 -----------------------------LNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L+ L+ LC+ G + A + DEF K + P
Sbjct: 338 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDKGSI-P 396
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
++ TY+TL+ G+CEKG + EA L + M + T+N+LI GL K G V+EG+++L
Sbjct: 397 SLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 456
Query: 292 ERMKGKGCYPNSASYQEVLYGL 313
E M GC+PN ++ + GL
Sbjct: 457 EEMLESGCFPNKTTFLILFEGL 478
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 82/172 (47%), Gaps = 3/172 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ + P+ +L +I+ L + + D + +++ ++ C + +I + GR+
Sbjct: 323 RSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM-LKNNCMPDNALLSTLIH-WLCKEGRV 380
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S+A LFD PS+ T+N ++ + E ++ + + +A N+L
Sbjct: 381 SEA-RKLFDEFDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVL 439
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
++GL +NGN++ VL+E + C PN T+ L GL + G E+A ++
Sbjct: 440 IEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIV 491
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 142/288 (49%), Gaps = 4/288 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN-MAGR 143
+D P+ Y ++I+ LA+A + + + +R+ + YNV+ I+G +A
Sbjct: 179 RDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGI--TPSAVTYNVV-IHGMCLAYT 235
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+E M S C PS TFN++++ E + G D +
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC ++ A ++L++ K+ C+P V T +TL+HGLC+ G ++EA +L+ M S G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D VT+N L+ G + G+ E +LL M +G PN +Y ++ GL R PEA
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +M +P+ +Y LI G C+ V+ + +MV G P
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 463
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 147/301 (48%), Gaps = 12/301 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYG-N 139
++ +P+ Y ++I+ LA+A + + D+ Q++ G + + I+G
Sbjct: 4 RNVSPDSWSYGILIDGLAKAGKLNDARDLFQKL-------LHSGVTPSTVAYTSLIHGLC 56
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
MA A E DM C PS T+N++++ + E + + G D
Sbjct: 57 MANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVV 116
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N ++ GLC++G +E A + +E + C PN R+++T++ GLC++ +++A + M
Sbjct: 117 TYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E+ I D+ ++ ILI GL K GK+ E KL RM G P++ +Y V++G+
Sbjct: 177 EARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTL 236
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA EL M + PS ++ LI C + +++ +LK+M G VP + + +
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTL 296
Query: 380 V 380
+
Sbjct: 297 I 297
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 142/292 (48%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +++ L ++ R + E ++ ++E+L + +N I + +I +A
Sbjct: 113 PDVVTYNTVMDGLCKSGRVE--EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 170
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +M + + P ++ ++++ L A E ++ G+ A N+++ G+
Sbjct: 171 QVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGM 230
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C L+ A + + C P+ T++ L+ C++G ++EAF LL+RM +G D
Sbjct: 231 CLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDV 290
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ LISGL +V++ LLE M + C P + +++GL R EA+E++
Sbjct: 291 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 350
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ SP V+Y L+HG C E +L MV +G P + + +V
Sbjct: 351 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 402
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 2/298 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+R PN + II L Q + D + ++ + D + Y ++ AG
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDI--PPDSWSYGILIDGLAKAG 199
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++++A + M PS T+N+V++ + A E ++ S G N
Sbjct: 200 KLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFN 259
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C+ G ++ AF +L P+V TYSTL+ GLC V++A LLE M
Sbjct: 260 ILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 319
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
VT N LI GL K G+++E ++L+ M G P+ +Y +++G + A
Sbjct: 320 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERA 379
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+EL+ M+ ++P+ V+Y L+ GLC + + V +M G P + + ++
Sbjct: 380 RELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 437
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 2/262 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y ++I+ + A D ++ + ++ K CR S F +N++ G++ +A
Sbjct: 217 TPSAVTYNVVIHGMCLAYTLDEALELFKSMR-SKGCRPSR-FTFNILIDAHCKRGKMDEA 274
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L M P V T++ +++ L S + + + K + N L+ G
Sbjct: 275 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G ++ A VLD P+V TY+TL+HG C G E A LL M + G+ +
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+ L+SGL K ++ E + +MK GC PN +Y ++ G + +L G
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454
Query: 328 RMICERMSPSFVSYKKLIHGLC 349
M+C +SP V Y L LC
Sbjct: 455 EMVCAGISPDHVVYGTLAAELC 476
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M N P ++ ++++ L A + + ++ GV L+ GLC +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A + + ++ C P+ TY+ ++ C++G +EEA L+++M +G D VT+N
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
++ GL K G+VEE + L M+ GC PN S+ ++ GL + + +A ++ M
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P SY LI GL + + + ++M+ G P
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITP 218
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 137/326 (42%), Gaps = 15/326 (4%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ K P+ + ++I+ + + D +++R+ DG +V+ ++G
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMT-------DDGHVPDVVTYSTLISG 299
Query: 143 -----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
R+ A L DM C P+V T N +++ L A E + + + G D
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+ G C G E A +L + + PNV TY+ L+ GLC+ + EA G+
Sbjct: 360 VVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFA 419
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+M+S G + T+ LI G G+V+ G+KL M G P+ Y + L
Sbjct: 420 QMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479
Query: 318 RFPEAKELV--GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
R A E++ GR + Y+ + GL + +E ++ MV+ G +P
Sbjct: 480 RSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPER 539
Query: 376 WREIV-GCVTFGKDNRNRVYVTETVD 400
+V G G+ R + E +D
Sbjct: 540 CASLVAGLCKSGQGGEARAVLEEIMD 565
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 131/277 (47%), Gaps = 1/277 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ YT +IN L + R DA D+ +++ CR + F YN + R+ A
Sbjct: 43 QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCR-PNAFTYNALVDGLCKQDRLDAA 101
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ + + P V T+N ++ L E +T + G N ++ G
Sbjct: 102 RAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITG 161
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC L A V +E ++ PN+ TYS ++ GLC+ ++EA LL+RM SEG D
Sbjct: 162 LCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPD 221
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + L+ G G+++ + LL RM +GC P+ +Y V+ L R +A E+
Sbjct: 222 LVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR 281
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ + SP+ V+Y LI G C V++ V+++M
Sbjct: 282 ELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM 318
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 132/289 (45%), Gaps = 5/289 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ L + R DA ++ + D YN + GR+ +A+
Sbjct: 80 PNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFA--PDVVTYNTLMAALFQLGRVDEAL 137
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
T M P++ +FN ++ L A+ + ++ + ++++ GL
Sbjct: 138 ATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGL 197
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++ L+ A +LD + C P++ Y+ L+ G G ++ A GLL RM S+G D
Sbjct: 198 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDV 257
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ ++I L K G+V++ ++ + C PN +Y ++ G R E +++
Sbjct: 258 VTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMRE 317
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
M C P+ V+Y +I GL E+ + ++M + GFVP +R
Sbjct: 318 MACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYR 363
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 126/245 (51%), Gaps = 10/245 (4%)
Query: 142 GRISKAIETLFD--MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL----GVE 195
GR+++A+E FD + + P V ++ ++N L G + + K+ G
Sbjct: 24 GRVAQALEH-FDASLELAHAQPDVVSYTTLINGLCK---LGRVDAAFDLFRKMVAAGGCR 79
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+A N L+ GLC+ L+AA V+ E K++ P+V TY+TLM L + G V+EA
Sbjct: 80 PNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALAT 139
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+M EG V+FN +I+GL + ++ + +++ M + +PN +Y V+ GL
Sbjct: 140 FTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCK 199
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
+ EA++L+ RM+ E P V+Y L+ G ++ +L++MV QG +P +
Sbjct: 200 SDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVT 259
Query: 376 WREIV 380
+ ++
Sbjct: 260 YTVVI 264
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 6/205 (2%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ V N+ R D++PN Y+++I+ L ++ + D + ++ R+ V + CR D Y +
Sbjct: 172 LEVFNEMIDR-DFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRM-VSEGCR-PDLVAYTPL 228
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+ + AGR+ A+ L M S C P V T+ +V++ L + I+
Sbjct: 229 VLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKC 288
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ + L+ G C ++ V+ E C PNV TY+T++ GL EEA+G
Sbjct: 289 SPNVVTYSALIGGYCRASRVDEGGKVMREMA---CRPNVVTYNTMIWGLSMVDRNEEAYG 345
Query: 255 LLERMESEGIDADTVTFNILISGLR 279
+ M G D T+ L LR
Sbjct: 346 MFREMSECGFVPDARTYRGLKRALR 370
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLE-RMKGKGCYPNSASYQEVLYGLLDKK 317
M+ EG+ + T +I++ GL + G+V + ++ + ++ P+ SY ++ GL
Sbjct: 1 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60
Query: 318 RFPEAKELVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
R A +L +M+ P+ +Y L+ GLC Q ++ V+ + ++ F P
Sbjct: 61 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAP 115
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 131/277 (47%), Gaps = 1/277 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ YT +IN L + R DA D+ +++ CR + F YN + R+ A
Sbjct: 93 QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCR-PNAFTYNALVDGLCKQDRLDAA 151
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ + + P V T+N ++ L E +T + G N ++ G
Sbjct: 152 RAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITG 211
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC L A V +E ++ PN+ TYS ++ GLC+ ++EA LL+RM SEG D
Sbjct: 212 LCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPD 271
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + L+ G G+++ + LL RM +GC P+ +Y V+ L R +A E+
Sbjct: 272 LVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR 331
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ + SP+ V+Y LI G C V++ V+++M
Sbjct: 332 ELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM 368
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 132/289 (45%), Gaps = 5/289 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ L + R DA ++ + D YN + GR+ +A+
Sbjct: 130 PNAFTYNALVDGLCKQDRLDAARAVITEARKRDFA--PDVVTYNTLMAALFQLGRVDEAL 187
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
T M P++ +FN ++ L A+ + ++ + ++++ GL
Sbjct: 188 ATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGL 247
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++ L+ A +LD + C P++ Y+ L+ G G ++ A GLL RM S+G D
Sbjct: 248 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDV 307
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ ++I L K G+V++ ++ + C PN +Y ++ G R E +++
Sbjct: 308 VTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMRE 367
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
M C P+ V+Y +I GL E+ + ++M + GFVP +R
Sbjct: 368 MACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYR 413
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 145/296 (48%), Gaps = 18/296 (6%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKL-C--RFSDGFFYNVIKIYGNMAGRISKAIET 150
Y ++I A DA +++ + VE + C R + + + GR+++A+E
Sbjct: 28 YNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCR-----CGRVAQALEH 82
Query: 151 LFD--MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL----GVEIDACCLNIL 204
FD + + P V ++ ++N L G + + K+ G +A N L
Sbjct: 83 -FDASLELAHAQPDVVSYTTLINGLCK---LGRVDAAFDLFRKMVAAGGCRPNAFTYNAL 138
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+ L+AA V+ E K++ P+V TY+TLM L + G V+EA +M EG
Sbjct: 139 VDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGY 198
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
V+FN +I+GL + ++ + +++ M + +PN +Y V+ GL + EA++
Sbjct: 199 VPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQ 258
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ RM+ E P V+Y L+ G ++ +L++MV QG +P + + ++
Sbjct: 259 LLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVI 314
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 6/205 (2%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ V N+ R D++PN Y+++I+ L ++ + D + ++ R+ V + CR D Y +
Sbjct: 222 LEVFNEMIDR-DFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRM-VSEGCR-PDLVAYTPL 278
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+ + AGR+ A+ L M S C P V T+ +V++ L + I+
Sbjct: 279 VLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKC 338
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ + L+ G C ++ V+ E C PNV TY+T++ GL EEA+G
Sbjct: 339 SPNVVTYSALIGGYCRASRVDEGGKVMREMA---CRPNVVTYNTMIWGLSMVDRNEEAYG 395
Query: 255 LLERMESEGIDADTVTFNILISGLR 279
+ M G D T+ L LR
Sbjct: 396 MFREMSECGFVPDARTYRGLKRALR 420
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 38/206 (18%)
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI------- 264
G+ A + E P Q +V TY+ L+ G C +++ AF LL M+ EG+
Sbjct: 5 GSHNQALQLFRENPCQLPASSV-TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTT 63
Query: 265 --------------------DA---------DTVTFNILISGLRKQGKVEEGMKLLERM- 294
DA D V++ LI+GL K G+V+ L +M
Sbjct: 64 SIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMV 123
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
GC PN+ +Y ++ GL + R A+ ++ +P V+Y L+ L V
Sbjct: 124 AAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRV 183
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
++ +M ++G+VP + + I+
Sbjct: 184 DEALATFTQMTEEGYVPTLVSFNAII 209
>gi|296089012|emb|CBI38715.3| unnamed protein product [Vitis vinifera]
Length = 429
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 152/325 (46%), Gaps = 40/325 (12%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
SP+ V K+ ++ DP+ + + S + ++ + + + ++I KL A++F ++D++ R
Sbjct: 58 SPSRVQKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMR 117
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+K E+ + F ++I+IYG A +A++T M ++ P K N +L LLVS
Sbjct: 118 LKSEQYS-INPSLFSDIIEIYGE-ANLPDQALKTFHSMLQFHSKPLPKHLNRLLQLLVSH 175
Query: 177 KLYGEIQ-GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ Y ++ SA + GV D NIL+ C NG+L A+ + ++ K++ P+V +
Sbjct: 176 RNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVES 235
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y LM GLC K V A LLE M ++G D +++ GL QG +E +E M
Sbjct: 236 YRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTF--GLCDQGLYDEAKNYVEEML 293
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
KG S F + LI+G CN +E
Sbjct: 294 SKG-----------------------------------FSLHFSVFHALINGFCNVGKLE 318
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
+ VL++M++ G P W I+
Sbjct: 319 EACEVLREMLRHGEAPHTETWVAII 343
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 114/240 (47%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A R++ A E + M C+P+ FN +++ L E G + +GV
Sbjct: 23 ANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFIETMRSMGVSPTIVT 82
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ G C+ L A +L E + EPN TY+T +HGLC+ G V++A L M
Sbjct: 83 YNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMT 142
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ I D + LI GL + GK+ E LL+ M+ GC P Y +L L R
Sbjct: 143 EKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRIN 202
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA +L RM + P ++++ ++ G C ++D +L++M G PR ++ ++
Sbjct: 203 EAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLI 262
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
IL+ GLC+ L AF +++ ++ C PN ++ +M LC++G EA+G +E M
Sbjct: 13 FGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFIETMR 72
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S G+ VT+N+LI G K+ K+ +++L+ M G+G PN +Y L+GL +
Sbjct: 73 SMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVD 132
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A L M +++ Y LI GLC + + +L +M G VP+ G + I+
Sbjct: 133 DALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAIL 192
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 133/284 (46%), Gaps = 4/284 (1%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P + ++++ L +A R DA E + + E+ C F + +N I GR ++A
Sbjct: 8 PTVVTFGILVDGLCKANRLTDAFE--LVEVMGERGC-FPNALVFNGIMDALCKEGRSAEA 64
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ M S P++ T+NL+++ + I G E + N L G
Sbjct: 65 YGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHG 124
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G ++ A + ++ +V Y+TL+ GLC+ G + EA+ LL+ ME+ G
Sbjct: 125 LCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPK 184
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+N ++S L K ++ E KL +RM G G P+ ++ +++G R +A L+
Sbjct: 185 PGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQ 244
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+M ++P V Y LI L V + +L++M+ +G P
Sbjct: 245 QMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSP 288
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A+E L +M P+ T+N L+ L + ++ + + + +D
Sbjct: 95 KLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYT 154
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC+ G L A+ +LDE C P Y+ ++ LC+ + EA L +RM
Sbjct: 155 TLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGS 214
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI D +TF +++ G + ++++ + LL++MK G P Y ++ L R EA
Sbjct: 215 GILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEA 274
Query: 323 KELVGRMICERMSPSFVSY 341
L+ MI +SP+ +Y
Sbjct: 275 YRLLQEMISRGLSPNSRTY 293
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 8/222 (3%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKV---EKLCRFSDGFFYNVIKIYGNMAGRI 144
+P Y L+I+ + ++ +I+Q + E + F + + K G++
Sbjct: 77 SPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKY-----GKV 131
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+ M V + +++ L A E + G C N +
Sbjct: 132 DDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAI 191
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L LC+ + A + P+ T+ ++ G C +++A LL++M+S G+
Sbjct: 192 LSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGL 251
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
V +N LI L + G+V E +LL+ M +G PNS +Y
Sbjct: 252 APREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY 293
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 7/208 (3%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ +L + + R + PN Y ++ L + + D + R EK R D + Y
Sbjct: 99 ALEILQEMTGR-GHEPNHVTYNTFLHGLCKYGKVDDALALF-RAMTEKKIRL-DVYGYTT 155
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ AG++++A L +M + C P +N +L+ L E ++ G
Sbjct: 156 LIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSG 215
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ D +++ G C ++ A +L + P Y+TL+ L G V EA+
Sbjct: 216 ILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAY 275
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQ 281
LL+ M S G+ ++ T+ + +RKQ
Sbjct: 276 RLLQEMISRGLSPNSRTYAL----MRKQ 299
>gi|115477108|ref|NP_001062150.1| Os08g0499800 [Oryza sativa Japonica Group]
gi|42407346|dbj|BAD08807.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|113624119|dbj|BAF24064.1| Os08g0499800 [Oryza sativa Japonica Group]
gi|125562056|gb|EAZ07504.1| hypothetical protein OsI_29761 [Oryza sativa Indica Group]
gi|215716978|dbj|BAG95341.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 443
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 163/358 (45%), Gaps = 5/358 (1%)
Query: 38 ASHQDSDHHAYKLNHKDWLSPTE--VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYT 95
AS + H + P E VL N RDP+ + + + + N +
Sbjct: 56 ASSKWRRRHPSTTKESAGVEPAEPPVLVRIKNERDPVRLYELFRANAHNRLLIENRFAFE 115
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
+ +LA A+R D +E+I+++ K R +GF +I +YG A A+ T +M
Sbjct: 116 DAVARLAGARRNDLVEEILEQHKALPQGR-REGFVVRIIGLYGK-ARMPDHALSTFREMG 173
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
Y C + K+ N + +L+ A+L+ E+ ++ S+ GVE+D N ++K +C+ G L
Sbjct: 174 LYGCPRTAKSLNATMKVLLRARLFDEVLQLFESSETYGVELDDISYNTVVKMMCDLGELR 233
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
AAF V+ E K P+V TY+TLM + G E GL M G ++N+ I
Sbjct: 234 AAFRVMQEMEKAGVRPDVITYTTLMDAFYKCGQREVGDGLWNLMRLRGCMPTLASYNVRI 293
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
L + + + L+ +M G P+ +Y V+ G AK + G M
Sbjct: 294 QFLVNRRRGWQANDLVRKMYASGLRPDEITYNLVIKGFFMMGEHEMAKTVFGAMHGRGCK 353
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNR 392
P+ Y+ ++H LC ++ + + K +++ + P + +++ G ++ KD R
Sbjct: 354 PNAKVYQTMVHYLCERREFDLAFRLCKDSMEKNWFPSVDTINQLLKGLISISKDRNAR 411
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C P++ ++N+ + LV+ + + + G+ D N+++KG G E A
Sbjct: 282 CMPTLASYNVRIQFLVNRRRGWQANDLVRKMYASGLRPDEITYNLVIKGFFMMGEHEMAK 341
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
V + C+PN + Y T++H LCE+ + AF L + + T N L+ GL
Sbjct: 342 TVFGAMHGRGCKPNAKVYQTMVHYLCERREFDLAFRLCKDSMEKNWFPSVDTINQLLKGL 401
Query: 279 ---RKQGKVEEGMKLLERMKGKGCYPNS--ASYQEVL 310
K E MKL+ + K Y N ++Q++L
Sbjct: 402 ISISKDRNAREIMKLV--IGRKPSYSNDEVKTFQDIL 436
>gi|125603901|gb|EAZ43226.1| hypothetical protein OsJ_27826 [Oryza sativa Japonica Group]
Length = 515
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 163/358 (45%), Gaps = 5/358 (1%)
Query: 38 ASHQDSDHHAYKLNHKDWLSPTE--VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYT 95
AS + H + P E VL N RDP+ + + + + N +
Sbjct: 128 ASSKWRRRHPSTTKESAGVEPAEPPVLVRIKNERDPVRLYELFRANAHNRLLIENRFAFE 187
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
+ +LA A+R D +E+I+++ K R +GF +I +YG A A+ T +M
Sbjct: 188 DAVARLAGARRNDLVEEILEQHKALPQGR-REGFVVRIIGLYGK-ARMPDHALSTFREMG 245
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
Y C + K+ N + +L+ A+L+ E+ ++ S+ GVE+D N ++K +C+ G L
Sbjct: 246 LYGCPRTAKSLNATMKVLLRARLFDEVLQLFESSETYGVELDDISYNTVVKMMCDLGELR 305
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
AAF V+ E K P+V TY+TLM + G E GL M G ++N+ I
Sbjct: 306 AAFRVMQEMEKAGVRPDVITYTTLMDAFYKCGQREVGDGLWNLMRLRGCMPTLASYNVRI 365
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
L + + + L+ +M G P+ +Y V+ G AK + G M
Sbjct: 366 QFLVNRRRGWQANDLVRKMYASGLRPDEITYNLVIKGFFMMGEHEMAKTVFGAMHGRGCK 425
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNR 392
P+ Y+ ++H LC ++ + + K +++ + P + +++ G ++ KD R
Sbjct: 426 PNAKVYQTMVHYLCERREFDLAFRLCKDSMEKNWFPSVDTINQLLKGLISISKDRNAR 483
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C P++ ++N+ + LV+ + + + G+ D N+++KG G E A
Sbjct: 354 CMPTLASYNVRIQFLVNRRRGWQANDLVRKMYASGLRPDEITYNLVIKGFFMMGEHEMAK 413
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
V + C+PN + Y T++H LCE+ + AF L + + T N L+ GL
Sbjct: 414 TVFGAMHGRGCKPNAKVYQTMVHYLCERREFDLAFRLCKDSMEKNWFPSVDTINQLLKGL 473
Query: 279 ---RKQGKVEEGMKLLERMKGKGCYPNS--ASYQEVL 310
K E MKL+ + K Y N ++Q++L
Sbjct: 474 ISISKDRNAREIMKLV--IGRKPSYSNDEVKTFQDIL 508
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 125/254 (49%), Gaps = 24/254 (9%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ A+ L M C P+V+++N V+N L + E + I A+ G+ +
Sbjct: 569 GKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITY 628
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC NG + AF + + K+ C PN+ TYS+L++GLC++G +EA LL+ ME
Sbjct: 629 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMER 688
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG------LLD 315
+G+ D VTF LI G G+++ LL RM GC PN +Y +L G LL+
Sbjct: 689 KGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLE 748
Query: 316 KK------------------RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
+K F L+ RM P+ +Y L+ GLC + +
Sbjct: 749 EKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEA 808
Query: 358 DWVLKKMVQQGFVP 371
+ ++K M ++GF P
Sbjct: 809 EQLVKDMKERGFCP 822
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 158/353 (44%), Gaps = 22/353 (6%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L V +I + +D SVI SKR Y N + ++N+L + + F + I
Sbjct: 115 LKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI-- 172
Query: 116 RIKVEKLCRFSD---------------GFFY-----NVIKIYGNMAGRISKAIETLFDMP 155
RI + K CR + GF + N + I + A M
Sbjct: 173 RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML 232
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
+ PS+ TFN ++N+L E + I + + + D L+ G C N NL+
Sbjct: 233 NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLD 292
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
AF V D K+ C+PN TYSTL++GLC +G V+EA +LE M +GI+ T+ + I
Sbjct: 293 LAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 352
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+ L EE ++L+ RMK +GC PN +Y ++ GL + A L +M+ E +
Sbjct: 353 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 412
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
P+ V+Y LI+ LC + M G + + EI+ + G D
Sbjct: 413 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 465
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 152/319 (47%), Gaps = 9/319 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K++ PN YT +I+ L++ + + + ++ E L + YN + + G
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL--VPNTVTYNALINELCVGG 429
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDAC 199
R S A++ M + + +T+N ++ L L G+I+ ++ K+G
Sbjct: 430 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLC---LGGDIEKAMVLFEKMLKMGPLPTVV 486
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ G GN+ A +LD + CEP+ TY+ L+ G + G +E A + M
Sbjct: 487 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 546
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G++ + V++ LI G K GKV+ + LLERM+ GC PN SY V+ GL + RF
Sbjct: 547 VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRF 606
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA+++ +M + + P+ ++Y LI GLC + + M ++ +P + + +
Sbjct: 607 SEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 666
Query: 380 V-GCVTFGKDNRNRVYVTE 397
+ G GK + + + E
Sbjct: 667 IYGLCQEGKADEAEILLKE 685
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 150/320 (46%), Gaps = 17/320 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +IN+L RF I + E ++ YN I + G I KA+
Sbjct: 413 PNTVTYNALINELCVGGRFSTALKIFHWM--EGHGSLANTQTYNEIIKGLCLGGDIEKAM 470
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-------GVEIDACCL 201
M P+V T+N ++N ++ +G +AA+L G E D
Sbjct: 471 VLFEKMLKMGPLPTVVTYNTLINGYLT-------KGNVNNAARLLDLMKENGCEPDEWTY 523
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G + G LE+A + E + PN +Y+TL+ G + G V+ A LLERME
Sbjct: 524 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEE 583
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + + ++N +I+GL K+ + E K+ ++M +G PN +Y ++ GL R
Sbjct: 584 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQF 643
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV- 380
A ++ M + P+ +Y LI+GLC + ++ + +LK+M ++G P + ++
Sbjct: 644 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 703
Query: 381 GCVTFGKDNRNRVYVTETVD 400
G V G+ + + + VD
Sbjct: 704 GFVVLGRIDHAFLLLRRMVD 723
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 143/314 (45%), Gaps = 5/314 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +IN L++ + E I+ +I L D F Y + I G+ R
Sbjct: 238 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLS--PDVFTYTSL-ILGHCRNRNLDLA 294
Query: 149 ETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+FD M C P+ T++ ++N L + E + + G+E + +
Sbjct: 295 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 354
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC + E A ++ K+ C PNV+TY+ L+ GL G +E A GL +M EG+ +
Sbjct: 355 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 414
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TVT+N LI+ L G+ +K+ M+G G N+ +Y E++ GL +A L
Sbjct: 415 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 474
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
+M+ P+ V+Y LI+G + V + +L M + G P + E+V G +G
Sbjct: 475 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 534
Query: 387 KDNRNRVYVTETVD 400
K Y E V+
Sbjct: 535 KLESASFYFQEMVE 548
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 134/304 (44%), Gaps = 6/304 (1%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
+R+ ++S + QY D +P+ YT +I + + D + R+ V++ C +
Sbjct: 256 VREAELILSQIFQY----DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM-VKEGCDPNS 310
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+ +I N GR+ +A++ L +M P+V T+ L + L + + E +
Sbjct: 311 VTYSTLINGLCN-EGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVA 369
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
K G + L+ GL G LE A + + K+ PN TY+ L++ LC G
Sbjct: 370 RMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 429
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
A + ME G A+T T+N +I GL G +E+ M L E+M G P +Y
Sbjct: 430 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 489
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G L K A L+ M P +Y +L+ G +E + ++MV+
Sbjct: 490 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 549
Query: 368 GFVP 371
G P
Sbjct: 550 GLNP 553
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 132/313 (42%), Gaps = 40/313 (12%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC-------RFSDGF 129
+ + KRK PN Y+ +I L Q + D E +++ ++ + L DGF
Sbjct: 647 IFHDMEKRKCL-PNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 705
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN------LLVSAKLYGEIQ 183
+ GRI A L M C P+ +T++++L LL+ K+ + +
Sbjct: 706 V---------VLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHE 756
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+Y+ + E D N E +L + CEP + TYSTL+ GL
Sbjct: 757 AVYSFSPH---EKDV--------------NFEIVSNLLARMSEIGCEPTLDTYSTLVSGL 799
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C KG EA L++ M+ G D + L+ K +V+ +K+ ++ KG +
Sbjct: 800 CRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHL 859
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+ Y+ ++ L + EA+ L M+ + + + + L+ GL + ++ +L
Sbjct: 860 SIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHI 919
Query: 364 MVQQGFVPRMGMW 376
M + F P + +
Sbjct: 920 MESKNFTPNIQTY 932
>gi|359489475|ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
vinifera]
Length = 1105
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 152/325 (46%), Gaps = 42/325 (12%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
SP+ V K+ ++ DP+ + + S + ++ + + + ++I KL A++F ++D++ R
Sbjct: 44 SPSRVQKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMR 103
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+K E+ + F ++I+IYG A +A++T M ++ P K N +L LLVS
Sbjct: 104 LKSEQYS-INPSLFSDIIEIYGE-ANLPDQALKTFHSMLQFHSKPLPKHLNRLLQLLVSH 161
Query: 177 KLYGEIQ-GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ Y ++ SA + GV D NIL+ C NG+L A+ + ++ K++ P+V +
Sbjct: 162 RNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVES 221
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y LM GLC K V A LLE M ++G D L+SGL QG +E +E M
Sbjct: 222 YRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDAT----LVSGLCDQGLYDEAKNYVEEML 277
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
KG S F + LI+G CN +E
Sbjct: 278 SKG-----------------------------------FSLHFSVFHALINGFCNVGKLE 302
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
+ VL++M++ G P W I+
Sbjct: 303 EACEVLREMLRHGEAPHTETWVAII 327
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 2/283 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P++ Y +N L Q +M + E D F YN++ G++ +
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG--HDPDVFTYNIVVNCLCKNGQLEE 339
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M C P + TFN ++ L + E + GV D NIL+
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G+ A + +E C P+ TY+TL+ LC G + +A LL+ MES G
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
T+T+N +I GL K+ ++EE ++ ++M +G N+ ++ ++ GL K+ +A EL+
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+MI E + P+ ++Y ++ C Q ++ +L+ M GF
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 133/251 (52%), Gaps = 4/251 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA++ L DM S C S T+N +++ L E + ++ G+ +A
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC++ ++ AF ++++ + +PN TY++++ C++G++++A +LE M +
Sbjct: 500 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + D VT+ LI+GL K G+ + +K+L M+ KG P +Y VL L + +
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 619
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC--NQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A L M P ++YK + GLC + E D++L +MV +GF+P +R +
Sbjct: 620 ALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML-EMVDKGFIPEFSSFRML 678
Query: 380 V-GCVTFGKDN 389
G + G D+
Sbjct: 679 AEGLLNLGMDD 689
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 151/324 (46%), Gaps = 14/324 (4%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM-------QRIKVEKL 122
DP + + +LN R D+ P +Y II KL D ++ ++ ++K+ +
Sbjct: 53 DPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVV 112
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
F D Y +++ + I ++ LF + + +N +LN+LV +
Sbjct: 113 HSFLDS--YEGQQLFDDAVDLILNQLQPLFGIQA-----DTVVYNHLLNVLVEGSKMKLL 165
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ +Y+ G++ D N L+K LC + A +L+E + P+ T++TLM G
Sbjct: 166 ESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQG 225
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
E+G++E A + RM G A VT N+LI+G K G+VE+ + +++ G P+
Sbjct: 226 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 285
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+Y + GL A +++ M+ E P +Y +++ LC +E+ +L
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345
Query: 363 KMVQQGFVPRMGMWREIVGCVTFG 386
+MV +G +P + + ++ + G
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTG 369
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 130/267 (48%), Gaps = 9/267 (3%)
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVK 164
+ED + I+ E +DGF + I + G + A++ + M P V
Sbjct: 267 VEDALGYIQQE----IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+N+V+N L E +GI G D N L+ LC LE A + +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ P+V T++ L++ LC+ G+ A L E M++ G D VT+N LI L GK+
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ + LL+ M+ GC ++ +Y ++ GL K R EA+E+ +M + +S + +++ L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I GLC K ++D ++ +M+ +G P
Sbjct: 503 IDGLCKDKKIDDAFELINQMISEGLQP 529
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 8/276 (2%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+LNQ + +Y ++N L + + +E + + + D +N +
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGI--KPDVVTFNTLMK 189
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---G 193
A ++ A+ L +M S P TF ++ V G I+ A++ G
Sbjct: 190 ALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEE---GSIEAALRVKARMLEMG 246
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+N+L+ G C+ G +E A + + EP+ TY+T ++GLC+ +V A
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+++ M EG D D T+NI+++ L K G++EE +L +M +GC P+ ++ ++ L
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
R EA +L ++ + +SP ++ LI+ LC
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALC 402
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 2/283 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P++ Y +N L Q +M + E D F YN++ G++ +
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG--HDPDVFTYNIVVNCLCKNGQLEE 339
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M C P + TFN ++ L + E + GV D NIL+
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G+ A + +E C P+ TY+TL+ LC G + +A LL+ MES G
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
T+T+N +I GL K+ ++EE ++ ++M +G N+ ++ ++ GL K+ +A EL+
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+MI E + P+ ++Y ++ C Q ++ +L+ M GF
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 133/251 (52%), Gaps = 4/251 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA++ L DM S C S T+N +++ L E + ++ G+ +A
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC++ ++ AF ++++ + +PN TY++++ C++G++++A +LE M +
Sbjct: 500 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + D VT+ LI+GL K G+ + +K+L M+ KG P +Y VL L + +
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 619
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC--NQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A L M P ++YK + GLC + E D++L +MV +GF+P +R +
Sbjct: 620 ALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML-EMVDKGFIPEFSSFRML 678
Query: 380 V-GCVTFGKDN 389
G + G D+
Sbjct: 679 AEGLLNLGMDD 689
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 151/324 (46%), Gaps = 14/324 (4%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM-------QRIKVEKL 122
DP + + +LN R D+ P +Y II KL D ++ ++ ++K+ +
Sbjct: 53 DPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVV 112
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
F D Y +++ + I ++ LF + + +N +LN+LV +
Sbjct: 113 HSFLDS--YEGQQLFDDAVDLILNQLQPLFGIQA-----DTVVYNHLLNVLVEGSKMKLL 165
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ +Y+ G++ D N L+K LC + A +L+E + P+ T++TLM G
Sbjct: 166 ESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQG 225
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
E+G++E A + RM G A VT N+LI+G K G+VE+ + +++ G P+
Sbjct: 226 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 285
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+Y + GL A +++ M+ E P +Y +++ LC +E+ +L
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345
Query: 363 KMVQQGFVPRMGMWREIVGCVTFG 386
+MV +G +P + + ++ + G
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTG 369
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 130/267 (48%), Gaps = 9/267 (3%)
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVK 164
+ED + I+ E +DGF + I + G + A++ + M P V
Sbjct: 267 VEDALGYIQQE----IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+N+V+N L E +GI G D N L+ LC LE A + +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ P+V T++ L++ LC+ G+ A L E M++ G D VT+N LI L GK+
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ + LL+ M+ GC ++ +Y ++ GL K R EA+E+ +M + +S + +++ L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I GLC K ++D ++ +M+ +G P
Sbjct: 503 IDGLCKDKKIDDAFELINQMISEGLQP 529
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 130/280 (46%), Gaps = 8/280 (2%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+V +LNQ + +Y ++N L + + +E + + + D +N
Sbjct: 128 AVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGI--KPDVVTFN 185
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ A ++ A+ L +M S P TF ++ V G I+ A++
Sbjct: 186 TLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEE---GSIEAALRVKARM 242
Query: 193 ---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G +N+L+ G C+ G +E A + + EP+ TY+T ++GLC+ +V
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
A +++ M EG D D T+NI+++ L K G++EE +L +M +GC P+ ++ +
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+ L R EA +L ++ + +SP ++ LI+ LC
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALC 402
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 158/323 (48%), Gaps = 10/323 (3%)
Query: 52 HKDWLSPTEVLKIFSNLRD---PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD 108
+ D + T+++K F LR+ + V+ +L ++ + P+ Y +IN + R D
Sbjct: 117 NPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ-----PDVFAYNALINGFCKMNRID 171
Query: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL 168
++ R++ + D YN++ G++ A++ L + S NC P+V T+ +
Sbjct: 172 DATRVLDRMRSKDFS--PDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTI 229
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
++ + E + G++ D N +++G+C+ G ++ AF ++ +
Sbjct: 230 LIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKG 289
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
CEP+V +Y+ L+ L +G EE L+ +M SE D + VT++ILI+ L + GK+EE M
Sbjct: 290 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 349
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
LL+ MK KG P++ SY ++ + R A E + MI + P V+Y ++ L
Sbjct: 350 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 409
Query: 349 CNQKLVEDVDWVLKKMVQQGFVP 371
C + + K+ + G P
Sbjct: 410 CKNGKADQALEIFGKLGEVGCSP 432
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 146/318 (45%), Gaps = 12/318 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF--SDGFFYNVIKIYGNMAGRISK 146
P YT++I +A + D ++ E L R D F YN I G + +
Sbjct: 222 PTVITYTILI----EATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 277
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A E + ++ C P V ++N++L L++ + E + + T + + +IL+
Sbjct: 278 AFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 337
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC +G +E A +L ++ P+ +Y L+ C +G ++ A LE M S+G
Sbjct: 338 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 397
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D V +N +++ L K GK ++ +++ ++ GC PNS+SY + L A ++
Sbjct: 398 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 457
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
M+ + P ++Y +I LC + +V+ +L M F P + + ++ + F
Sbjct: 458 LEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVL--LGFC 515
Query: 387 KDNRNRVYVTETVDSLAS 404
K +R + + +D L S
Sbjct: 516 KAHR----IEDAIDVLDS 529
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 2/243 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y+++I L + + + ++++ +K + L D + Y+ + GR+ A
Sbjct: 326 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT--PDAYSYDPLIAAFCREGRLDVA 383
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
IE L M S C P + +N VL L + I+ ++G ++ N +
Sbjct: 384 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 443
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L +G+ A +++ E +P+ TY++++ LC +G V++AF LL M S
Sbjct: 444 LWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPS 503
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+NI++ G K ++E+ + +L+ M G GC PN +Y ++ G+ EA EL
Sbjct: 504 VVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAN 563
Query: 328 RMI 330
++
Sbjct: 564 DLV 566
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 128/298 (42%), Gaps = 2/298 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y II + + D ++++ +++ K C D YN++ G+ +
Sbjct: 257 PDMFTYNTIIRGMCKEGMVDRAFEMIRNLEL-KGCE-PDVISYNILLRALLNQGKWEEGE 314
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + M S C P+V T+++++ L E + + G+ DA + L+
Sbjct: 315 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 374
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G L+ A L+ C P++ Y+T++ LC+ G ++A + ++ G ++
Sbjct: 375 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 434
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++N + S L G + ++ M G P+ +Y ++ L + +A EL+
Sbjct: 435 SSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVD 494
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
M PS V+Y ++ G C +ED VL MV G P + ++ + F
Sbjct: 495 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFA 552
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +GN + ++L+ ++ P+V + L+ G NV +A ++E +E G D
Sbjct: 96 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+N LI+G K ++++ ++L+RM+ K P++ +Y ++ L + + A +++ +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ + P+ ++Y LI + V++ +L +M+ +G P M + I+
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTII 266
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS-PSF 338
+ G E + LLE M KG P+ +++ G + P+A ++ I E+ P
Sbjct: 97 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVME--ILEKFGQPDV 154
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+Y LI+G C ++D VL +M + F P + ++G
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIG 197
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 159/331 (48%), Gaps = 10/331 (3%)
Query: 52 HKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIE 111
HK ++P ++ K+ D + + + + +K Y + +Y ++I KL F I+
Sbjct: 68 HK--ITPFQLCKLLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTID 125
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFNLVL 170
++ ++K E + F + F ++++ Y + AG + + +M + Y+C P+ K++N+VL
Sbjct: 126 RLLMQMKDEGIV-FKESLFISIMRDY-DKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVL 183
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
+LVS + ++ + +++K LC +++A VL + K C
Sbjct: 184 EILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCV 243
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PN Y TL+H L + V EA LLE M G D TFN +I GL K ++ E K+
Sbjct: 244 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 303
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+ RM +G P+ +Y ++ GL R AK+L R+ P+ V + LIHG
Sbjct: 304 VNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPTSVIFNTLIHGFVT 359
Query: 351 QKLVEDVDWVLKKMVQQ-GFVPRMGMWREIV 380
++D VL MV G VP + + ++
Sbjct: 360 HGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 390
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 156/326 (47%), Gaps = 30/326 (9%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD---GFF----------- 130
+ + P++ Y ++N L + R DA +D+ RI F+ GF
Sbjct: 310 RGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAV 369
Query: 131 -------YNVIK--------IYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
Y ++ IYG G + A+E L DM + C P+V ++ ++++
Sbjct: 370 LSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFC 429
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E + + G++ + N L+ C+ + A + E P++ C+P+V
Sbjct: 430 KLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 489
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T+++L+ GLCE ++ A LL M SEG+ A+TVT+N LI+ ++G+++E KL+ M
Sbjct: 490 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 549
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+G + +Y ++ GL +A+ L +M+ + + PS +S LI+GLC +V
Sbjct: 550 VFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMV 609
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
E+ K+MV +G P + + ++
Sbjct: 610 EEAVEFQKEMVLRGSTPDIVTFNSLI 635
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 137/294 (46%), Gaps = 2/294 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ K PN YT++++ + + D +++ + + L + GF N +
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGF--NCLISAFCKEH 467
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI +A+E +MP C P V TFN +++ L + GV + N
Sbjct: 468 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 527
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G ++ A +++E Q + TY++L+ GLC G V++A L E+M +
Sbjct: 528 TLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 587
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ +++ NILI+GL + G VEE ++ + M +G P+ ++ ++ GL R +
Sbjct: 588 GLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 647
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ ++ E + P V+Y L+ LC V D +L + ++ GFVP W
Sbjct: 648 LTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTW 701
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 143/284 (50%), Gaps = 2/284 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + +I+ + R+ E ++ + + K C S F N++ + G + +AI
Sbjct: 150 PNVITHNIILRSMCSTGRWMDAEKLLSDM-LRKGCSPSVVTF-NILINFLCRQGLLGRAI 207
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L MP + C P+ ++N +L+ K G D N LL L
Sbjct: 208 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 267
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++G ++ A +L++ + C P + TY+T++ GL + G E A LL+ M +G+ D
Sbjct: 268 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 327
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ L+SGL ++GKV+E +K ++G G PN+ +Y ++ GL ++ A + +
Sbjct: 328 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 387
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
MI +R P+ +Y LI G+ + L ++ +L ++ +G V +
Sbjct: 388 MISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 431
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 127/254 (50%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YNV+ GR+ +AI+ L +MPSY C P+V T N++L + S + + + +
Sbjct: 116 DVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 175
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ + G NIL+ LC G L A +L++ P C PN +Y+ L+HG C++
Sbjct: 176 SDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKE 235
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
++ A L+ M S G D VT+N L++ L K GKV+ +++L ++ KGC P +Y
Sbjct: 236 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 295
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
V+ GL + A +L+ M + + P ++Y L+ GL + V++ +
Sbjct: 296 NTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 355
Query: 367 QGFVPRMGMWREIV 380
G P + I+
Sbjct: 356 LGIRPNAITYNSIM 369
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 1/199 (0%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G + D N+L+ G+C+ G L+ A L+ P C+PNV T++ ++ +C G +A
Sbjct: 112 GSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDA 171
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LL M +G VTFNILI+ L +QG + + +LE+M GC PNS SY +L+G
Sbjct: 172 EKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 231
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+K+ A E + M+ P V+Y L+ LC V+ +L ++ +G P
Sbjct: 232 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 291
Query: 373 MGMWREIV-GCVTFGKDNR 390
+ + ++ G GK R
Sbjct: 292 LITYNTVIDGLSKVGKTER 310
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 120/237 (50%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A++ L +M + P V T+N+++N + E + G + + NI
Sbjct: 98 VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 157
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L+ +C G A +L + ++ C P+V T++ L++ LC +G + A +LE+M G
Sbjct: 158 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 217
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+++++N L+ G K+ K++ ++ L+ M +GCYP+ +Y +L L + A
Sbjct: 218 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 277
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E++ ++ + SP ++Y +I GL E +L +M ++G P + + +V
Sbjct: 278 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 334
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 8/223 (3%)
Query: 88 NPNEALYTLIINKLAQAKRFD-AIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
PN Y +++ + K+ D AIE DIM V + C + D YN + G++
Sbjct: 219 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIM----VSRGC-YPDIVTYNTLLTALCKDGKV 273
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+E L + S C P + T+N V++ L + + G++ D + L
Sbjct: 274 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 333
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GL G ++ A + PN TY+++M GLC+ + A L M S+
Sbjct: 334 VSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRC 393
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
T+ ILI G+ +G +E + LL + +G S++ Q
Sbjct: 394 KPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQ 436
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 174/367 (47%), Gaps = 15/367 (4%)
Query: 12 RQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHK----DWLSPTEVLKIFSN 67
RQ QSL T K F + S ++ +S H + K D + T+++K F
Sbjct: 78 RQQHSQSLGFRDTQMLK-IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFT 136
Query: 68 LRD---PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
LR+ + V+ +L ++ + P+ Y +IN + R D ++ R++ +
Sbjct: 137 LRNIPKAVRVMEILEKFGQ-----PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS- 190
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
D YN++ G++ A++ L + S NC P+V T+ +++ + E
Sbjct: 191 -PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALK 249
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ G++ D N +++G+C+ G ++ AF ++ + CEP+V +Y+ L+ L
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+G EE L+ +M SE D + VT++ILI+ L + GK+EE M LL+ MK KG P++
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
SY ++ + R A E + MI + P V+Y ++ LC + + K+
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 365 VQQGFVP 371
+ G P
Sbjct: 430 GEVGCSP 436
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 138/300 (46%), Gaps = 7/300 (2%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF--SDGFFY 131
+ VLNQ + P YT++I +A + D ++ E L R D F Y
Sbjct: 212 ALKVLNQLLS-DNCQPTVITYTILI----EATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N I G + +A E + ++ C P V ++N++L L++ + E + + T
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
+ + +IL+ LC +G +E A +L ++ P+ +Y L+ C +G ++
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A LE M S+G D V +N +++ L K GK ++ +++ ++ GC PNS+SY +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L A ++ M+ + P ++Y +I LC + +V++ +L M F P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 2/243 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y+++I L + + + ++++ +K + L D + Y+ + GR+ A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT--PDAYSYDPLIAAFCREGRLDVA 387
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
IE L M S C P + +N VL L + I+ ++G ++ N +
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L +G+ A +++ E +P+ TY++++ LC +G V+EAF LL M S
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+NI++ G K ++E+ + +LE M G GC PN +Y ++ G+ EA EL
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAN 567
Query: 328 RMI 330
++
Sbjct: 568 DLV 570
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 129/298 (43%), Gaps = 2/298 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y II + + D ++++ +++ K C D YN++ G+ +
Sbjct: 261 PDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL-KGCE-PDVISYNILLRALLNQGKWEEGE 318
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + M S C P+V T+++++ L E + + G+ DA + L+
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G L+ A L+ C P++ Y+T++ LC+ G ++A + ++ G ++
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++N + S L G + ++ M G P+ +Y ++ L + EA EL+
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
M PS V+Y ++ G C +ED VL+ MV G P + ++ + F
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 556
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +GN + ++L+ ++ P+V + L+ G N+ +A ++E +E G D
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+N LI+G K ++++ ++L+RM+ K P++ +Y ++ L + + A +++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ + P+ ++Y LI + V++ ++ +M+ +G P M + I+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS-PSF 338
+ G E + LLE M KG P+ +++ G + P+A ++ I E+ P
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME--ILEKFGQPDV 158
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+Y LI+G C ++D VL +M + F P + ++G
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIG 201
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 152/300 (50%), Gaps = 5/300 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKA 147
PN Y ++IN L + +FD +I R+K + R D + Y+ + I+G +G + A
Sbjct: 228 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE--RGQDLYTYSTL-IHGLCGSGNLDGA 284
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M P V +N +LN + A E ++ K G NIL++G
Sbjct: 285 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNILIRG 343
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L EN ++ A + + P+++C + TY L+HGLC+ G + +A +LE E+ D D
Sbjct: 344 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 403
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T ++ +I+GL ++G+++E +L++M GC PN V+ G + + +A G
Sbjct: 404 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFG 463
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
M+ + P+ V+Y LI+GL + + ++K+M+Q+G+ P M + ++ + GK
Sbjct: 464 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGK 523
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 142/327 (43%), Gaps = 47/327 (14%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-------- 107
LSP V+K+ + ++P S +S+ + ++ Y+ ++ I+ +L K
Sbjct: 8 LSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAYAKNS 67
Query: 108 --DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKT 165
D DI QR+ +I+G C P +++
Sbjct: 68 MPDQALDIFQRMH----------------EIFG--------------------CQPGIRS 91
Query: 166 FNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP 225
+N +LN L+ + + E + + +G+ + NIL+K C + A +L+
Sbjct: 92 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 151
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
Q P+V +Y TL++ L + G + +A L + M G+ D +NILI G K+G +
Sbjct: 152 GQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDIL 211
Query: 286 EGMKLLER-MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
++ ER +KG YPN SY ++ GL +F E+ E+ RM +Y L
Sbjct: 212 NASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTL 271
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
IHGLC ++ V K+M + G P
Sbjct: 272 IHGLCGSGNLDGATRVYKEMAENGVSP 298
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ + L M + C P+ N V+N V A + + + G
Sbjct: 418 GRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTY 477
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GL + A+ ++ E ++ +PN+ TYS LM+GLC+ ++ A L +
Sbjct: 478 NTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALE 537
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G D NI+I GL GKVE+ ++L MK + C PN ++ ++ G + F
Sbjct: 538 KGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFER 597
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ++ ++ + P +SY + GLC+ + D L V +G +P W +V
Sbjct: 598 ASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 656
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 121/254 (47%), Gaps = 2/254 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ +IN L + R D + ++ ++ + C+ + + N + A ++ A+ +
Sbjct: 407 YSSMINGLCREGRLDEVAGVLDQM-TKHGCK-PNPYVCNAVINGFVRASKLEDALRFFGN 464
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S C+P+V T+N ++N L A+ + E + + G + + ++L+ GLC+
Sbjct: 465 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKK 524
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A + + ++ +P+V+ ++ ++HGLC G VE+A L M+ + VT N
Sbjct: 525 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNT 584
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ G K E K+ + + G P+ SY L GL R +A + +
Sbjct: 585 LMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 644
Query: 334 MSPSFVSYKKLIHG 347
+ P+ +++ L+ G
Sbjct: 645 VLPTAITWNILVQG 658
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 137/343 (39%), Gaps = 41/343 (11%)
Query: 45 HHAYKLNH--KDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLA 102
H Y +H K P V ++ P + + + + P Y ++N L
Sbjct: 41 HTPYVFHHILKRLFDPKLVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALI 100
Query: 103 QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPS 162
++ ++D E + E + + YN++ + KA E L M P
Sbjct: 101 ESNKWDEAESFF--LYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPD 158
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL------------------ 204
V ++ ++N L + ++ + GV D C NIL
Sbjct: 159 VFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWE 218
Query: 205 ------------------LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ GLC+ G + +F + K ++ TYSTL+HGLC
Sbjct: 219 RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGS 278
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
GN++ A + + M G+ D V +N +++G + G++EE ++L + M+ +GC SY
Sbjct: 279 GNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSY 337
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
++ GL + + EA + + + ++Y L+HGLC
Sbjct: 338 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 380
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 120/250 (48%), Gaps = 7/250 (2%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--VEKLCRFSDGFFY 131
V VL+Q +K PN + +IN +A + +ED ++ V K C F Y
Sbjct: 423 VAGVLDQMTKH-GCKPNPYVCNAVINGFVRASK---LEDALRFFGNMVSKGC-FPTVVTY 477
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + + A R S+A + +M P++ T++L++N L K ++ A +
Sbjct: 478 NTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALE 537
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G + D NI++ GLC +G +E A + E ++NC PN+ T++TLM G + + E
Sbjct: 538 KGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFER 597
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A + + + G+ D +++NI + GL ++ + + L +G P + ++ ++
Sbjct: 598 ASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQ 657
Query: 312 GLLDKKRFPE 321
G L K + E
Sbjct: 658 GYLALKGYME 667
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 6/163 (3%)
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFNILISG 277
YV K+ +P + + H + ++A + +RM E G ++N L++
Sbjct: 44 YVFHHILKRLFDPKL-----VAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNA 98
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L + K +E + G PN +Y ++ KK+F +AKEL+ M + SP
Sbjct: 99 LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPD 158
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
SY LI+ L + D + +M ++G P + + ++
Sbjct: 159 VFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILI 201
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 2/283 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P++ Y +N L Q +M + E D F YN++ G++ +
Sbjct: 190 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG--HDPDVFTYNIVVNCLCKNGQLEE 247
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M C P + TFN ++ L + E + GV D NIL+
Sbjct: 248 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 307
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G+ A + +E C P+ TY+TL+ LC G + +A LL+ MES G
Sbjct: 308 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 367
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
T+T+N +I GL K+ ++EE ++ ++M +G N+ ++ ++ GL K+ +A EL+
Sbjct: 368 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 427
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+MI E + P+ ++Y ++ C Q ++ +L+ M GF
Sbjct: 428 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 470
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 133/251 (52%), Gaps = 4/251 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA++ L DM S C S T+N +++ L E + ++ G+ +A
Sbjct: 348 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 407
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC++ ++ AF ++++ + +PN TY++++ C++G++++A +LE M +
Sbjct: 408 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 467
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + D VT+ LI+GL K G+ + +K+L M+ KG P +Y VL L + +
Sbjct: 468 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 527
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC--NQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A L M P ++YK + GLC + E D++L +MV +GF+P +R +
Sbjct: 528 ALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML-EMVDKGFIPEFSSFRML 586
Query: 380 V-GCVTFGKDN 389
G + G D+
Sbjct: 587 AEGLLNLGMDD 597
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+N+V+N L E +GI G D N L+ LC LE A +
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ + P+V T++ L++ LC+ G+ A L E M++ G D VT+N LI L
Sbjct: 287 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 346
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
GK+ + + LL+ M+ GC ++ +Y ++ GL K R EA+E+ +M + +S + ++
Sbjct: 347 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 406
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ LI GLC K ++D ++ +M+ +G P
Sbjct: 407 FNTLIDGLCKDKKIDDAFELINQMISEGLQP 437
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%)
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
P + +N +LN+LV ++ +Y+ G++ D N L+K LC +
Sbjct: 46 PLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQV 105
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
A +L+E + P+ T++TLM G E+G++E A + RM G A VT N+L
Sbjct: 106 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 165
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I+G K G+VE+ + +++ G P+ +Y + GL A +++ M+ E
Sbjct: 166 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 225
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
P +Y +++ LC +E+ +L +MV +G +P + + ++ + G
Sbjct: 226 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 277
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 8/276 (2%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+LNQ + +Y ++N L + + +E + + + D +N +
Sbjct: 40 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGI--KPDVVTFNTLMK 97
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---G 193
A ++ A+ L +M S P TF ++ V G I+ A++ G
Sbjct: 98 ALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEE---GSIEAALRVKARMLEMG 154
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+N+L+ G C+ G +E A + + EP+ TY+T ++GLC+ +V A
Sbjct: 155 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 214
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+++ M EG D D T+NI+++ L K G++EE +L +M +GC P+ ++ ++ L
Sbjct: 215 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 274
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
R EA +L ++ + +SP ++ LI+ LC
Sbjct: 275 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALC 310
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 142 GRISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G K +E+++ +M + P V TFN ++ L A + + GV D
Sbjct: 67 GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETT 126
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L++G E G++EAA V + C T + L++G C+ G VE+A G +++
Sbjct: 127 FTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 186
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++G + D +T+N ++GL + V +K+++ M +G P+ +Y V+ L +
Sbjct: 187 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 246
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EAK ++ +M+ P ++ LI LC +E+ + +++ +G P
Sbjct: 247 EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSP 297
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 152/313 (48%), Gaps = 3/313 (0%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
++ FS+L+ SVL + K P +T +IN L + +F ++ + V
Sbjct: 139 LINCFSHLQRVDLAFSVLAKIIKL-GLQPTIVTFTTLINWLCKVGKFAQAMELFDDM-VA 196
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+ CR D + Y I G + A L M C P+V T++ +++ +
Sbjct: 197 RGCR-PDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVN 255
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E I++ G+ D N L++GLC + A +L+E N P++ T++ L+
Sbjct: 256 EALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLV 315
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
+C++G V EA G+L+ M G++ D VT++ L+ G + +V E KL + M KGC
Sbjct: 316 DTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCK 375
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P+ SY ++ G KR EAK+L MI + ++P+ VSY LIHGLC + + +
Sbjct: 376 PDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNL 435
Query: 361 LKKMVQQGFVPRM 373
K M G +P +
Sbjct: 436 FKNMHTNGNLPNL 448
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 4/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
PN Y+ II+ + +R + DI +KV+ + D F YN +I+ N + + +A
Sbjct: 236 PNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGIS--PDIFTYNSLIQGLCNFS-QWKEA 292
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L +M S N P + TFN++++ + E QG+ + ++GVE D + L+ G
Sbjct: 293 SALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYG 352
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ A + D + C+P+V +Y+ L++G C+ ++EA L M +G+ +
Sbjct: 353 YSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPN 412
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V++N LI GL + G + E L + M G PN +Y +L G + F +A L
Sbjct: 413 NVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFR 472
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M P+ V Y LI +C + D + ++ +G P ++ I+
Sbjct: 473 AMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTII 525
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P++ T ++++N + + KLG++ L+ LC+ G A +
Sbjct: 131 PNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMEL 190
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+ + C P+V TY+T+++GLC+ G A GLL++ME G + VT++ +I RK
Sbjct: 191 FDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRK 250
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+V E + + MK KG P+ +Y ++ GL + ++ EA L+ M + P V+
Sbjct: 251 DRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVT 310
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ L+ +C + V + VLK M + G P
Sbjct: 311 FNVLVDTICKEGKVSEAQGVLKTMTEMGVEP 341
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 151 LFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
LFD M + C P V ++N+++N K E + ++ G+ + N L+ GLC
Sbjct: 365 LFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLC 424
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G+L A + PN+ TYS L+ G C++G +AF L M+S + V
Sbjct: 425 QLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLV 484
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+NILI + K G + + KL + KG PN+ Y ++ GL + EA E M
Sbjct: 485 MYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNM 544
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ P +SY +I G + K ++ +M +GF+ +G
Sbjct: 545 EEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVG 589
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS-AKLYGEIQGIYTSAAKLGVEIDACCLN 202
I A+ + M P + F +L+ +V + Y + + G+ + L+
Sbjct: 78 IDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLS 137
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ ++ AF VL + K +P + T++TL++ LC+ G +A L + M +
Sbjct: 138 ILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVAR 197
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D T+ +I+GL K G+ LL++M+ GC PN +Y ++ +R EA
Sbjct: 198 GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEA 257
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
++ M + +SP +Y LI GLCN ++ +L +M +P + + +V
Sbjct: 258 LDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDT 317
Query: 383 V 383
+
Sbjct: 318 I 318
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 9/236 (3%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+L + K FDA+ + K C+ D F YN++ RI +A + +
Sbjct: 353 YSLRSEVVEARKLFDAM--------ITKGCK-PDVFSYNILINGYCKVKRIDEAKQLFNE 403
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P+ ++N +++ L E + ++ + G + +ILL G C+ G
Sbjct: 404 MIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGY 463
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
AF + +PN+ Y+ L+ +C+ GN+ +A L + +G+ + +
Sbjct: 464 FGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTT 523
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+I+GL K+G ++E ++ M+ GC P+ SY ++ G L K A +L+G M
Sbjct: 524 IINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEM 579
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 105/215 (48%), Gaps = 4/215 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K P+ Y ++IN + KR D + + + + L + YN + I+G G
Sbjct: 372 KGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLT--PNNVSYNTL-IHGLCQLGS 428
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A +M + P++ T++++L+ +G+ ++ + + + NI
Sbjct: 429 LREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNI 488
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ +C++GNL A + E + +PN + Y+T+++GLC++G ++EA ME +G
Sbjct: 489 LIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDG 548
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
D +++N++I G ++L+ M+ KG
Sbjct: 549 CPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKG 583
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/182 (18%), Positives = 74/182 (40%), Gaps = 2/182 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I+ L Q ++ + + + F Y+++ G KA
Sbjct: 411 PNNVSYNTLIHGLCQLGSLREARNLFKNMHTNG--NLPNLFTYSILLDGFCKQGYFGKAF 468
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M S P++ +N++++ + + + + +++ G++ +A ++ GL
Sbjct: 469 RLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGL 528
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G L+ A + C P+ +Y+ ++ G + A L+ M +G AD
Sbjct: 529 CKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADV 588
Query: 269 VT 270
T
Sbjct: 589 GT 590
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 121/239 (50%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A++ L M C P V T++ V+N L + E +GI G D
Sbjct: 315 GHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTF 374
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ LC LE A + E + PNV T++ L++ LC+ G+ A L E M+S
Sbjct: 375 NTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKS 434
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D VT+NILI L GK+ + + LL+ M+ GC ++ +Y ++ GL ++R E
Sbjct: 435 SGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEE 494
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A+E+ +M + + +++ LI GLCN + ++D ++ +M+ +G P + I+
Sbjct: 495 AEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSIL 553
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 2/283 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ ++ +N L Q D ++ + +++ C + VI N G + +
Sbjct: 297 FEPDRVTFSTFVNGLCQNGHVDHALKVLG-LMLQEGCEPDVYTYSTVINCLCN-NGELEE 354
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A + M C P TFN ++ L + E + G+ + NIL+
Sbjct: 355 AKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILIN 414
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G+ A + +E C P+ TY+ L+ LC G + +A LL+ ME G
Sbjct: 415 ALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQ 474
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
TVT+N +I GL K+ ++EE ++ ++M G N+ ++ ++ GL + +R +A ELV
Sbjct: 475 STVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELV 534
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+MI E + P+ V+Y ++ C Q + +L+ M GF
Sbjct: 535 DQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGF 577
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 162/357 (45%), Gaps = 38/357 (10%)
Query: 55 WLSPTEVLKIFSNLR---DPISVISVLNQYSKRKD-YNPNEALYTLIINKLAQAKRFDAI 110
+ + +E ++ + LR DP + + +LN R D P+ +Y II KL A FD +
Sbjct: 50 FAAGSEQERLVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLM 109
Query: 111 EDIMQRIKVE-----------------KLCRFSDGF--FYNVIKIYGNMA---------- 141
+ ++ ++ E +L F D F N + ++G A
Sbjct: 110 KVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLT 169
Query: 142 ----GRISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G K +E+ + +M S P V TFN V++ L A+ + + V
Sbjct: 170 VLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAP 229
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D L++G E G++EAA + + C P T + L++G C+ G V +A G +
Sbjct: 230 DETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYI 289
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
++ ++G + D VTF+ ++GL + G V+ +K+L M +GC P+ +Y V+ L +
Sbjct: 290 QQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNN 349
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EAK +V +M+ P ++ LI LC + +E+ + +++ +G P +
Sbjct: 350 GELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNV 406
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 145/308 (47%), Gaps = 6/308 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +PN + ++IN L + + + +K D YN++ +G++
Sbjct: 400 KGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCT--PDEVTYNILIDNLCSSGKL 457
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+KA++ L +M C S T+N +++ L + E + ++ G+ +A N L
Sbjct: 458 AKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTL 517
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC ++ A ++D+ + +PN TY++++ C++GN+ +A +L+ M + G
Sbjct: 518 IDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGF 577
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ D VT+ LI+GL K + + +KLL M+ KG P +Y V+ L +A
Sbjct: 578 EVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALS 637
Query: 325 LVGRMICERMSPSFVSYKKLIHGLC--NQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-G 381
L M P +YK + GLC + E D+ L +M GF+P +R + G
Sbjct: 638 LFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDF-LVEMADNGFIPEFSSFRMLAEG 696
Query: 382 CVTFGKDN 389
+ G D+
Sbjct: 697 LLNLGMDD 704
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 149/310 (48%), Gaps = 16/310 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ +IN L + + I+ ++ V+ C D +N + + ++ +A+
Sbjct: 334 PDVYTYSTVINCLCNNGELEEAKGIVNQM-VDSGC-LPDTTTFNTLIVALCTENQLEEAL 391
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLL-------VSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ ++ P+V TFN+++N L ++ +L+ E++ G D
Sbjct: 392 DLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMK-------SSGCTPDEVTY 444
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ LC +G L A +L E C + TY+T++ GLC++ +EEA + ++M+
Sbjct: 445 NILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDV 504
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
GI + +TFN LI GL ++++ +L+++M +G PN+ +Y +L + +
Sbjct: 505 TGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISK 564
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A +++ M V+Y LI+GLC + + +L+ M +G P + ++
Sbjct: 565 AADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQ 624
Query: 382 CVTFGKDNRN 391
+ G + R+
Sbjct: 625 SLFRGNNGRD 634
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 35/263 (13%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G I A+ M C P+ T N+++N G+ G G E D
Sbjct: 245 GSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTF 304
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ + GLC+NG+++ A VL ++ CEP+V TYST+++ LC G +EEA G++ +M
Sbjct: 305 STFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVD 364
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGM--------------------------------- 288
G DT TFN LI L + ++EE +
Sbjct: 365 SGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHL 424
Query: 289 --KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+L E MK GC P+ +Y ++ L + +A +L+ M S V+Y +I
Sbjct: 425 AVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIID 484
Query: 347 GLCNQKLVEDVDWVLKKMVQQGF 369
GLC ++ +E+ + V +M G
Sbjct: 485 GLCKRRRIEEAEEVFDQMDVTGI 507
>gi|359496226|ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Vitis vinifera]
Length = 382
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 154/293 (52%), Gaps = 5/293 (1%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ-RIKV 119
V K R+ ++ + S+ + +Y + +LA AKRF IE+I++ + K
Sbjct: 29 VFKDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKY 88
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
+ + R +GF +I +YG +G A + +MP C SV +FN +L V++K +
Sbjct: 89 KDISR--EGFAVRLITLYGK-SGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVNSKKF 145
Query: 180 GEIQGIYTS-AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+++G ++ +KL VE D NI++ GLC+ G++++A +LDE K++ EP++ T++T
Sbjct: 146 DKVEGFFSELPSKLSVEPDLVSYNIVINGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNT 205
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L++G G + + RME + I D ++N + GL + ++ EG+ L+E M+ KG
Sbjct: 206 LLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVGLVSEKRMLEGIGLVEEMQTKG 265
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
P+ S+ ++ G + + EA G+M P +++ L+ C +
Sbjct: 266 IKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCLPDKLTFATLVPLYCEK 318
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 122/245 (49%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YNV+ GR A + L DM C PSV TFN+++N L L G +
Sbjct: 153 DVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVL 212
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
K G ++ N LL G C+ +E A L + + C P++ TY+TL+ LC+
Sbjct: 213 EKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKD 272
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G V+ A LL ++ S+G +T+N +I GL K GK ++ KLL+ M+ KG P+ +Y
Sbjct: 273 GKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITY 332
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL + + EA + + + P+ ++Y ++ GLC + + L MVQ
Sbjct: 333 SSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQ 392
Query: 367 QGFVP 371
+G P
Sbjct: 393 RGCKP 397
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 143/284 (50%), Gaps = 2/284 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++I+ + R+ E ++ + V + C S F N++ + G + +AI
Sbjct: 152 PDVITYNVLISGMCSTGRWMDAEKLLADM-VRRGCSPSVVTF-NILINFLCRKGLLGRAI 209
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L MP + C P+ ++N +L+ K G D N LL L
Sbjct: 210 DVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTAL 269
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++G ++AA +L++ + C P + TY+T++ GL + G ++A LL+ M ++G+ D
Sbjct: 270 CKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDI 329
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ L+ GL ++GKV+E +K ++ G PN+ +Y ++ GL ++ A + +
Sbjct: 330 ITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAY 389
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
M+ P+ SY LI GL + L ++ +L ++ +G V +
Sbjct: 390 MVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKK 433
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 116/239 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+ KA + + P V T+N++++ + S + + + + + G
Sbjct: 133 GKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTF 192
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ LC G L A VL++ PK C PN +Y+ L+HG C++ +E A L +M S
Sbjct: 193 NILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTS 252
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D VT+N L++ L K GKV+ ++LL ++ KGC P +Y V+ GL + +
Sbjct: 253 RGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQ 312
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +L+ M + + P ++Y L+ GL + V++ + G P + I+
Sbjct: 313 AAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIM 371
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 98/189 (51%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D N+L+ G+C G A +L + ++ C P+V T++ L++ LC KG + A
Sbjct: 149 GAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRA 208
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+LE+M G +++++N L+ G K+ K+E ++ L +M +GCYP+ +Y +L
Sbjct: 209 IDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTA 268
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L + A EL+ ++ + SP ++Y +I GL + +L +M +G P
Sbjct: 269 LCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPD 328
Query: 373 MGMWREIVG 381
+ + +VG
Sbjct: 329 IITYSSLVG 337
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 1/188 (0%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++G C+ G A +++ P+V TY+ L+ G+C G +A LL M G
Sbjct: 125 LIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRG 184
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
VTFNILI+ L ++G + + +LE+M GC PNS SY +L+G +K+ A
Sbjct: 185 CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAI 244
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GC 382
E +G+M P V+Y L+ LC V+ +L ++ +G P + + ++ G
Sbjct: 245 EYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 304
Query: 383 VTFGKDNR 390
GK ++
Sbjct: 305 SKVGKTDQ 312
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L L NG LE F L+ + P++ ++L+ G C+ G +A ++E +E G
Sbjct: 91 LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+N+LISG+ G+ + KLL M +GC P+ ++ ++ L K A +
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAID 210
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ +M +P+ +SY L+HG C +K +E L KM +G P
Sbjct: 211 VLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYP 257
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 3/231 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I VL + K PN Y +++ + K+ + + + ++ + C + D YN +
Sbjct: 209 IDVLEKMPKH-GCTPNSLSYNPLLHGFCKEKKMERAIEYLGKM-TSRGC-YPDIVTYNTL 265
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G++ A+E L + S C P + T+N V++ L + + G+
Sbjct: 266 LTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGL 325
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ D + L+ GL G ++ A + +PN TY+ +M GLC+ + A
Sbjct: 326 KPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAID 385
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
L M G ++ ILI GL +G +E ++LL + +G S++
Sbjct: 386 FLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSSA 436
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 154/320 (48%), Gaps = 40/320 (12%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RKD PNEA ++++ + L Q D ++++++ + CR D YN + + GR
Sbjct: 342 RKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMH-KYGCR-PDAVIYNTLIYSFSEQGR 399
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A++ L MP C P V +FN L L A+ + + + + + + NI
Sbjct: 400 VDDALKLLNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNI 456
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA----------- 252
L+ LC+NG + A V ++ PK C P++ TYS+L++GL E+G VE A
Sbjct: 457 LIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCKP 516
Query: 253 --FG-------------------LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
FG L+ M + + +TFNILI+ L ++G V+ +++
Sbjct: 517 DIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVF 576
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E+M G P+ +Y ++ G ++ R +A+ L+ M C+ P VSY + GLC
Sbjct: 577 EQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCK---PDAVSYNSALKGLCRA 633
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
+ ++ + V+ +M++ P
Sbjct: 634 ERWKEAEEVVAEMLRMKCPP 653
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 136/259 (52%), Gaps = 16/259 (6%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ + + L +A+R+D E+++ ++ E C + F N++ GR++ A
Sbjct: 413 SPDVISFNAALKGLCRAERWDDAEELIVQMLRED-CPLIEMTF-NILIDSLCQNGRVNNA 470
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL----GVEIDACCLNI 203
IE MP Y C P + T++ ++N L QG+ SA +L + D N
Sbjct: 471 IEVFEQMPKYGCTPDIVTYSSLINGLSE-------QGLVESAIELFQSMPCKPDIFGYNA 523
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+LKGLC E A ++ +++C PN T++ L++ LC+KG V+ A + E+M G
Sbjct: 524 VLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYG 583
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D T+N LI+G +QG++++ +LL M C P++ SY L GL +R+ EA+
Sbjct: 584 STPDIFTYNALINGFSEQGRLDDARRLLSTMS---CKPDAVSYNSALKGLCRAERWKEAE 640
Query: 324 ELVGRMICERMSPSFVSYK 342
E+V M+ + P+ V++K
Sbjct: 641 EVVAEMLRMKCPPNEVTFK 659
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 139/292 (47%), Gaps = 8/292 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L A++++ E +M + V C ++ F I+ + G + +A+
Sbjct: 210 PDTYTYNTVLMGLCGARQWEDAEALMAEM-VRNHCPPNEVTFATQIRAFCQ-NGLLDRAV 267
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L MP Y C P V ++ ++N G + + + + C N LKGL
Sbjct: 268 QLLDRMPQYGCTPDVVIYSTLVNGFSE---QGRVDDAIELLNGMLCKPNTICYNAALKGL 324
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C E ++ E +++C PN T+S L LC+ G V+ A +LE+M G D
Sbjct: 325 CIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDA 384
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +N LI +QG+V++ +KLL M C P+ S+ L GL +R+ +A+EL+ +
Sbjct: 385 VIYNTLIYSFSEQGRVDDALKLLNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQ 441
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ E +++ LI LC V + V ++M + G P + + ++
Sbjct: 442 MLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLI 493
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 132/285 (46%), Gaps = 10/285 (3%)
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
++I KL +R E ++ +K +D +N + GR++ A E L
Sbjct: 117 ILIKKLCAQRRLADAERVLDALKAAGA---ADPVSHNTLVAGYCRDGRLADA-ERLLAAA 172
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
+ +V T+ ++N + G + A + V D N +L GLC E
Sbjct: 173 GLSGAANVVTYTTLINGYCRS---GRLADALALIASMPVAPDTYTYNTVLMGLCGARQWE 229
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A ++ E + +C PN T++T + C+ G ++ A LL+RM G D V ++ L+
Sbjct: 230 DAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLV 289
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+G +QG+V++ ++LL G C PN+ Y L GL +R+ + +L+ M+ +
Sbjct: 290 NGFSEQGRVDDAIELL---NGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCL 346
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P+ ++ L LC LV+ VL++M + G P ++ ++
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLI 391
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 6/180 (3%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C +G L A ++ P P+ TY+T++ GLC E+A L+ M
Sbjct: 186 LINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNH 242
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VTF I + G ++ ++LL+RM GC P+ Y ++ G ++ R +A
Sbjct: 243 CPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAI 302
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
EL+ M+C+ P+ + Y + GLC + EDV ++ +MV++ +P + + C+
Sbjct: 303 ELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCL 359
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 2/276 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I+ L +A R D D+ + E L + Y ++ Y +G KA+
Sbjct: 402 PNLHTYNTLISGLLRANRLDDALDLFSNM--ESLGVEPTAYTYILLIDYHGKSGHPGKAL 459
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
ET M + P++ N L L GE + ++ G+ D+ N+++K
Sbjct: 460 ETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCY 519
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G ++ A +L E K CEP+V ++L+ L + G VEEA+ + RME +
Sbjct: 520 SKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTV 579
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+NIL++GL K+G++++ ++L E M G GC PN+ ++ +L L A ++ +
Sbjct: 580 VTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYK 639
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
M P +++ +IHG Q +++ W+ +M
Sbjct: 640 MTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM 675
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 139/305 (45%), Gaps = 2/305 (0%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+V +++K P +Y L+I+ + + ++ + +K D F YN +
Sbjct: 775 NVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCA--PDTFTYNSLI 832
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
+G+I++ + +M + C P+ T+N+V++ LV + + +Y +
Sbjct: 833 DAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFS 892
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
C L+ GL ++G L+ A + D C PN Y+ L++G + G+V+ A
Sbjct: 893 PTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEF 952
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+RM EGI D ++ IL+ L G+V++ + E++K G P+ +Y ++ GL
Sbjct: 953 FKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGR 1012
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
+R EA L M + P +Y LI L ++E+ + +++ G P +
Sbjct: 1013 SQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFT 1072
Query: 376 WREIV 380
+ ++
Sbjct: 1073 YNALI 1077
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 135/310 (43%), Gaps = 5/310 (1%)
Query: 53 KDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIED 112
K L L + S R I + L + + PN YT+ I L + + D
Sbjct: 226 KPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYR 285
Query: 113 IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
IM+R+ + C D Y V+ A ++ A+ M S + P T+ +L+
Sbjct: 286 IMKRMD-DDGCG-PDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDK 343
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
+++ I+T G D IL+ LC+ G + AF +LD KQ PN
Sbjct: 344 FSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPN 403
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ TY+TL+ GL +++A L MES G++ T+ +LI K G + ++ E
Sbjct: 404 LHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFE 463
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+MK +G PN + LY L + R EAK + + ++P V+Y ++ C K
Sbjct: 464 KMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMK--CYSK 521
Query: 353 LVEDVDWVLK 362
V VD +K
Sbjct: 522 -VGQVDEAIK 530
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 144/306 (47%), Gaps = 12/306 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK--IYGNM 140
K + P++ Y +++K + D +E I ++ +DG+ +V+ I N
Sbjct: 326 KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEME-------ADGYAPDVVTFTILVNA 378
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
AGRI++A + L M P++ T+N +++ L+ A + ++++ LGVE
Sbjct: 379 LCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPT 438
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A +L+ ++G+ A ++ + PN+ + ++ L E G + EA +
Sbjct: 439 AYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFN 498
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
++S G+ D+VT+N+++ K G+V+E +KLL M C P+ ++ L
Sbjct: 499 ELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAG 558
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
R EA ++ RM ++P+ V+Y L+ GL + ++ + + M G P +
Sbjct: 559 RVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFN 618
Query: 378 EIVGCV 383
++ C+
Sbjct: 619 TLLDCL 624
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 143/331 (43%), Gaps = 16/331 (4%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDA------- 109
S EVL + ++ DPI + Y K PN T N + + R
Sbjct: 90 SSDEVLGVLHSISDPIHALF----YFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAF 145
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLV 169
+ D+MQR + + R D + ++ + G + +A L M + ++N +
Sbjct: 146 VFDLMQR---QIIRRNVDTYLIIFKSLF--IRGGLRQAPSALEKMREAGFVLNAYSYNGL 200
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
++ L+ + E +Y G++ + L+ + N++ +L+E
Sbjct: 201 IHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGL 260
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
PN+ TY+ + L G ++EA+ +++RM+ +G D VT+ +LI L K+++ M
Sbjct: 261 RPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMC 320
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
L +MK P+ +Y +L D + +++ M + +P V++ L++ LC
Sbjct: 321 LFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALC 380
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + +L M +QG +P + + ++
Sbjct: 381 KAGRINEAFDLLDTMRKQGVLPNLHTYNTLI 411
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 43/286 (15%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+ + YN + + +G +A+E M S PS+KTF+ ++ + + G+
Sbjct: 193 NAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLL 252
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+G+ + I ++ L +G ++ A+ ++ C P+V TY+ L+ LC
Sbjct: 253 EEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTA 312
Query: 247 GNVEEAFGLLER-----------------------------------MESEGIDADTVTF 271
+++A L + ME++G D VTF
Sbjct: 313 RKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTF 372
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
IL++ L K G++ E LL+ M+ +G PN +Y ++ GLL R +A +L M
Sbjct: 373 TILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMES 432
Query: 332 ERMSPSFVSYKKLI--HGLCNQ--KLVEDVDWVLKKMVQQGFVPRM 373
+ P+ +Y LI HG K +E +KM +G P +
Sbjct: 433 LGVEPTAYTYILLIDYHGKSGHPGKALE----TFEKMKARGIAPNI 474
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 8/233 (3%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N +LY+L A+ R + + +K L D YN++ + G++ +AI+
Sbjct: 478 NASLYSL-----AEMGRLGEAKAMFNELKSSGLA--PDSVTYNMMMKCYSKVGQVDEAIK 530
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
L +M C P V N +++ L A E ++ ++ + NILL GL
Sbjct: 531 LLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLG 590
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G ++ A + + C PN T++TL+ LC+ V+ A + +M + D +
Sbjct: 591 KEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVL 650
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
TFN +I G KQ +++ + L +MK K P+ + +L G++ + +A
Sbjct: 651 TFNTIIHGFIKQNQIKNAIWLFHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDA 702
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 142/331 (42%), Gaps = 10/331 (3%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ ++K +S + I +L++ SK + P+ + +I+ L +A R +E+
Sbjct: 508 DSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQ-CEPDVIVINSLIDTLYKAGR---VEEA 563
Query: 114 MQRI-KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
Q ++E++ YN++ G+I KA++ M + C P+ TFN +L+
Sbjct: 564 WQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDC 623
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
L ++ + D N ++ G + ++ A ++ + K+ P+
Sbjct: 624 LCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPD 682
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESE-GIDADTVTFNILISGLRKQGKVEEGMKLL 291
T TL+ G+ + G +E+AF + E + G + D + ++ G+ + E+ +
Sbjct: 683 HVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFG 742
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE-RMSPSFVSYKKLIHGLCN 350
ER+ + + + ++ L K+ A+ + + E + P+ Y LI G
Sbjct: 743 ERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLE 802
Query: 351 QKLVEDVDW-VLKKMVQQGFVPRMGMWREIV 380
VE V W + ++M G P + ++
Sbjct: 803 VHNVE-VAWNLFEEMKSAGCAPDTFTYNSLI 832
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 140/296 (47%), Gaps = 2/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN YT++I++ + R + +++ + + L + G YN + ++
Sbjct: 418 KGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG--YNCLISALCKDEKV 475
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+ DM S C P + TFN ++ L + E G+Y GV + N L
Sbjct: 476 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 535
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G ++ A ++++ + C + TY+ L+ LC GN+E+ L E M S+G+
Sbjct: 536 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 595
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ + ++ NILI+GL + G ++ ++ L M +G P+ +Y ++ GL R EA
Sbjct: 596 NPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 655
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L ++ E + P ++Y LI C + + +D +L + V GF+P W +V
Sbjct: 656 LFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILV 711
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 144/293 (49%), Gaps = 1/293 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NPN L+ +IN R D + +M + C D F YN + + G + A
Sbjct: 350 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCG-PDIFTYNTLILGLCKKGYLVSA 408
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E + +M C P+V T+ ++++ E + + + G+ ++A N L+
Sbjct: 409 RELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISA 468
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC++ ++ A + + + C+P++ T+++L+ GLC+ EEA GL + M EG+ A+
Sbjct: 469 LCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIAN 528
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+T+N LI ++G ++E +KL+ M +GC + +Y ++ L + L
Sbjct: 529 TITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFE 588
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + ++P+ +S LI+GLC ++ L+ M+ +G P + + ++
Sbjct: 589 DMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLI 641
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 164/327 (50%), Gaps = 8/327 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
++P ++ K+ D + + + +K Y +Y ++I+KL A F I+ ++
Sbjct: 76 ITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLM 135
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFNLVLNLLV 174
++K E + F + F ++K YG AG +A L DM Y+C P+ +++N+VL++L+
Sbjct: 136 QMKQEGIV-FRESLFILIMKHYGR-AGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLL 193
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
+ + ++ G+ +++K LC +++A +L + + C PN
Sbjct: 194 AGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAI 253
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y TL+H L + G V E LLE M G D TFN I GL K ++ E KL++RM
Sbjct: 254 VYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRM 313
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+G PNS +Y +++GL + EA+ L+ ++ +P+ V + LI+G ++ +
Sbjct: 314 LLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV----PNPNVVLFNTLINGYVSRGRL 369
Query: 355 EDVDWVL-KKMVQQGFVPRMGMWREIV 380
++ V+ + M+ G P + + ++
Sbjct: 370 DEAKAVMHESMLSVGCGPDIFTYNTLI 396
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 22/179 (12%)
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLV 169
++DI ++ LCR AG I K + DM S P+ + N++
Sbjct: 562 LDDITYNGLIKALCR----------------AGNIEKGLALFEDMMSKGLNPNNISCNIL 605
Query: 170 LNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
+N L G IQ + G+ D N L+ GLC+ G + A + D+
Sbjct: 606 INGLCRT---GNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 662
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
+ P+ TY+TL+ C++G ++A LL R G + VT+ IL+S K+G E
Sbjct: 663 EGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 146/287 (50%), Gaps = 3/287 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE-KLCRFSDGFFYNVIKIYGNMAGRIS 145
+ N Y I+ KL++A+ FD +E +M ++ + + F ++++ YG +AGR
Sbjct: 79 FTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYG-LAGRYE 137
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY-TSAAKLGVEIDACCLNIL 204
++ +P + SV++ N +LN+L+ + + + ++ S G+ + N+L
Sbjct: 138 SSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLL 197
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+K LC+ ++E+A+ VLDE P PN+ TY+T++ G +G++E A +LE M G
Sbjct: 198 VKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGW 257
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D T+ +L+ G K G+ E +++ M+ PN +Y ++ L +K+ EA+
Sbjct: 258 YPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARN 317
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ M+ P K+I LC V++ + +KM++ +P
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 42/262 (16%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR--FSDGFFYNVIKIYGNMAGRISK 146
PN YT I+ ++ + +++ E L R + D Y V+ GR S+
Sbjct: 224 PNLVTYTTILGGYVARGDMESAKRVLE----EMLDRGWYPDATTYTVLMDGYCKLGRFSE 279
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA--CC---- 200
A + DM P+ T+ +++ L K GE + ++ + D+ CC
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 201 -----------------------------LNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L+ L+ LC+ G + A + DEF K + P
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-P 398
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
++ TY+TL+ G+CEKG + EA L + M + T+N+LI GL K G V+EG+++L
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 458
Query: 292 ERMKGKGCYPNSASYQEVLYGL 313
E M GC+PN ++ + GL
Sbjct: 459 EEMLEIGCFPNKTTFLILFEGL 480
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 6/246 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
++ + PNE Y ++I L + K+ ++ + +E+ VI
Sbjct: 288 EKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM-LERSFMPDSSLCCKVIDALCE-DH 345
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A M NC P + +++ L E + ++ K G N
Sbjct: 346 KVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYN 404
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G+CE G L A + D+ ++ C+PN TY+ L+ GL + GNV+E +LE M
Sbjct: 405 TLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEI 464
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLER--MKGKGCYPNSASYQEVLYGLLDKKRFP 320
G + TF IL GL+K GK E+ MK++ M GK + + + G LDK P
Sbjct: 465 GCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESWELFLKKFAGELDKGVLP 524
Query: 321 EAKELV 326
KEL+
Sbjct: 525 -LKELL 529
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 146/292 (50%), Gaps = 5/292 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P++A+Y +I+ ++AK F + + V+ C + + N++ AGR A+
Sbjct: 43 PDDAIYNALISGYSKAKDFGQAFKFLAEM-VKNHCLPTVVTYTNIVDGLCK-AGRTKDAV 100
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M C P++ T+N+++ L + E + + A G D N +KGL
Sbjct: 101 KLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGL 160
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ ++ A L P P+V +Y+T+++GLC+ G+++ A +L++M + G D
Sbjct: 161 CKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDV 217
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ LI G K G+VE M LL+ M GC PN +Y +L L +A++++
Sbjct: 218 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 277
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M +P VSY I GLC + V+ V +MV++G P + +V
Sbjct: 278 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLV 329
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 20/296 (6%)
Query: 76 SVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
++++ YSK KD+ P YT I++ L +A R ++ ++ +
Sbjct: 50 ALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMR-D 108
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
K C + + YNVI ++ +A + L +M +P V T+N + L
Sbjct: 109 KGCS-PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVD 167
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E + A++ V D ++ GLC++G+L++A +LD+ + C P+V TYS+L+
Sbjct: 168 EARKFL---ARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLI 224
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
G C+ G VE A GLL+ M G + V +N L+ L + G + + +L M+ +G
Sbjct: 225 DGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFT 284
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
P+ SY + GL +R +AK + RM+ +P+ SY L+ LC +K ++D
Sbjct: 285 PDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDD 340
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 115/227 (50%), Gaps = 3/227 (1%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M +C P TF ++L L + + + + ++G D N L+ G + +
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
AF L E K +C P V TY+ ++ GLC+ G ++A LL+ M +G + T+N+
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
++ GL ++ K++E K+LE M +G +P+ +Y + GL R EA++ + RM
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++P VSY +I+GLC ++ +L +M +G P + + ++
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLI 224
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 4/263 (1%)
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
++K C+ D F + ++ + ++ KA + L M C P +N +++ AK
Sbjct: 2 IDKSCQ-PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+G+ K ++ GLC+ G + A +LDE + C PN+ TY+
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++ GLCE+ ++EA +LE M G D VT+N I GL K +V+E K L RM
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
P+ SY V+ GL A ++ +M +P V+Y LI G C VE
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237
Query: 359 WVLKKMVQQGFVPRMGMWREIVG 381
+L M++ G P M + ++G
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLG 260
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 143/302 (47%), Gaps = 4/302 (1%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
++ R P+ YT +IN L ++ D+ ++ ++ + C + ++I +
Sbjct: 171 KFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQM-TNRGCTPDVVTYSSLIDGFCK 229
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G + +A+ L M C P++ +N +L L G+ + + + G D
Sbjct: 230 -GGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVV 288
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N + GLC+ ++ A V D ++ C PN +YS L+ LC+K +++A L+E+
Sbjct: 289 SYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQA 348
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLER-MKGKGCYPNSASYQEVLYGLLDKKR 318
+ D + + +L+ GL K G+ +E L + + K C P+ Y +L +++
Sbjct: 349 REKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 408
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
+A ++ +M+ ER + V++ L+HGLC + D + +L MV +GF+P +
Sbjct: 409 IDKALQIHKQML-ERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGT 467
Query: 379 IV 380
+V
Sbjct: 468 LV 469
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 107/272 (39%), Gaps = 43/272 (15%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++ L + ED++ +++E+ D YN A R+ KA
Sbjct: 250 PNMVAYNSLLGALHRLGHIGKAEDML--VEMERRGFTPDVVSYNACIDGLCKAERVKKAK 307
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M C P+ ++++++ L K + + A + +D +LL GL
Sbjct: 308 AVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGL 367
Query: 209 CENGNLEAAFY----VLDEFPKQNCEP--------------------------------- 231
C+ G + A VLDE + CEP
Sbjct: 368 CKGGRFDEACALFSKVLDE---KICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC 424
Query: 232 -NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
NV T++ L+HGLC + +A +L M EG D VT+ L+ + K GK ++L
Sbjct: 425 CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALEL 484
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
E GC P+ +Y ++ GL+ + EA
Sbjct: 485 FEEAVKGGCVPDVVTYSALITGLVHENMAEEA 516
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 110/282 (39%), Gaps = 45/282 (15%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
LYT++++ L + RFD + ++ EK+C D FFYNV+ +I KA++
Sbjct: 359 LYTVLLDGLCKGGRFDEACALFSKVLDEKICE-PDVFFYNVMLDSHCKRRQIDKALQIHK 417
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M NC V NIL+ GLC +
Sbjct: 418 QMLERNCCNVVT------------------------------------WNILVHGLCVDD 441
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
L A +L + P+ TY TL+ +C+ G A L E G D VT++
Sbjct: 442 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 501
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
LI+GL + EE L ++ + A + ++ G + +L +I
Sbjct: 502 ALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIES 554
Query: 333 RMSPSFVSYKKLIHG-LCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ P+ ++ K I G L + + + + V+ GF P +
Sbjct: 555 DVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDL 596
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 155/314 (49%), Gaps = 9/314 (2%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
T VL F N D +S ++ +RK + YT +IN L +A + E ++Q +
Sbjct: 365 TTVLSGFCNKGDLVSARRWFDEM-QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMW 423
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+L D Y V+ G++++A + M P+V T+ + + L
Sbjct: 424 ARRL--DVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQ-- 479
Query: 179 YGEIQG---IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
G++Q + + G+E++AC N L+ GLC+ G LE A + + +P+V T
Sbjct: 480 -GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYT 538
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y+TL+ LC+ G+++ A LL+ M +GI VT+N+L++G G+VE G KLL+ M
Sbjct: 539 YTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWML 598
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
K +PN+A+Y ++ + E+ M + P+ +Y LI G C + ++
Sbjct: 599 EKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMK 658
Query: 356 DVDWVLKKMVQQGF 369
+ + +M+Q+GF
Sbjct: 659 EALYFHDEMIQKGF 672
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 133/286 (46%), Gaps = 14/286 (4%)
Query: 89 PNEALYTLIINKLAQ----AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
PN +YT ++ L + +ED++QR + + + V+ + N G +
Sbjct: 324 PNATVYTSVVALLCDKGWISDALRVVEDMVQRKVI-----LDEALYTTVLSGFCN-KGDL 377
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A +M T+ ++N L A E + + +++D +L
Sbjct: 378 VSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVL 437
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C+ G + AF + + ++ PNV TY+ L GLC++G+V+ A LL M ++G+
Sbjct: 438 IDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGL 497
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ + T+N LI+GL K G +E+ M+ + M P+ +Y ++ L A
Sbjct: 498 ELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHS 557
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVED----VDWVLKKMVQ 366
L+ M+ + + P+ V+Y L++G C VE +DW+L+K +
Sbjct: 558 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIH 603
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 140/309 (45%), Gaps = 8/309 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKAIETLF 152
Y +++ L A R ++D Q +++ D Y ++ I+G+ A G + A++ L
Sbjct: 262 YNILLKALCDAGR---VKDARQLF--DEMASAPDVVTYGIL-IHGHCALGELENAVKLLD 315
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M + P+ + V+ LL + + + V +D +L G C G
Sbjct: 316 EMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKG 375
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+L +A DE ++ + TY+T+++GLC +EEA LL+ M + +D D VT+
Sbjct: 376 DLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYT 435
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
+LI G K+GK+ E ++ M +G PN +Y + GL + A EL+ M +
Sbjct: 436 VLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNK 495
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD-NRN 391
+ + +Y LI+GLC +E + M P + + ++ + D +R
Sbjct: 496 GLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRA 555
Query: 392 RVYVTETVD 400
+ E +D
Sbjct: 556 HSLLQEMLD 564
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 7/228 (3%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +AIE ++P N V ++N++L L A G ++ ++ D I
Sbjct: 244 LDEAIELFQELPHKN----VCSYNILLKALCDA---GRVKDARQLFDEMASAPDVVTYGI 296
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C G LE A +LDE EPN Y++++ LC+KG + +A ++E M
Sbjct: 297 LIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRK 356
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D + ++SG +G + + + M+ KG + +Y ++ GL EA+
Sbjct: 357 VILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAE 416
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L+ M R+ V+Y LI G C + + + + MVQ+G P
Sbjct: 417 KLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTP 464
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 14/237 (5%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYTSAAKLGV 194
G IS A+ + DM + VL +L+ + + + E+Q + G+
Sbjct: 340 GWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQ-------RKGL 392
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D ++ GLC LE A +L E + + + TY+ L+ G C++G + EAF
Sbjct: 393 ATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQ 452
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ M G+ + VT+ L GL KQG V+ +LL M KG N+ +Y ++ GL
Sbjct: 453 MHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLC 512
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A + M + P +Y LI LC ++ +L++M+ +G P
Sbjct: 513 KAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKP 569
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 133/269 (49%), Gaps = 24/269 (8%)
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
+AIE + Q + + +C YN++ AGR+ A + +M S P V T+
Sbjct: 246 EAIE-LFQELPHKNVCS------YNILLKALCDAGRVKDARQLFDEMAS---APDVVTYG 295
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKL-------GVEIDACCLNILLKGLCENGNLEAAFYV 220
++++ + GE++ +A KL GVE +A ++ LC+ G + A V
Sbjct: 296 ILIHGHCA---LGELE----NAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRV 348
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+++ ++ + Y+T++ G C KG++ A + M+ +G+ D VT+ +I+GL +
Sbjct: 349 VEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCR 408
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
++EE KLL+ M + + +Y ++ G + + EA ++ M+ ++P+ V+
Sbjct: 409 AVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVT 468
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
Y L GLC Q V+ + +L +M +G
Sbjct: 469 YTALTDGLCKQGDVQAANELLHEMSNKGL 497
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 2/287 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ PN YT + + L + A +++ + + L + YN + AG
Sbjct: 459 QRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGL--ELNACTYNSLINGLCKAGY 516
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+ T+ DM + P V T+ +++ L + + G++ N+
Sbjct: 517 LEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNV 576
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C +G +E +LD ++N PN TY++LM C + N++ + + M S
Sbjct: 577 LMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRD 636
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + T+NILI G K ++E + + M KG + SY ++ L KK+F EA+
Sbjct: 637 VGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEAR 696
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
EL M E ++ Y I N+ +E + ++V+ V
Sbjct: 697 ELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASIV 743
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL R+ GI N ++S L ++E ++L + + K N SY +L L
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHK----NVCSYNILLKALC 270
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
D R +A++L M +P V+Y LIHG C +E+ +L +MV G P
Sbjct: 271 DAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNAT 327
Query: 375 MWREIVG 381
++ +V
Sbjct: 328 VYTSVVA 334
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 140/296 (47%), Gaps = 2/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN YT++I++ + R + +++ + + L + G YN + ++
Sbjct: 436 KGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG--YNCLISALCKDEKV 493
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+ DM S C P + TFN ++ L + E G+Y GV + N L
Sbjct: 494 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 553
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G ++ A ++++ + C + TY+ L+ LC GN+E+ L E M S+G+
Sbjct: 554 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 613
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ + ++ NILI+GL + G ++ ++ L M +G P+ +Y ++ GL R EA
Sbjct: 614 NPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 673
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L ++ E + P ++Y LI C + + +D +L + V GF+P W +V
Sbjct: 674 LFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILV 729
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 144/293 (49%), Gaps = 1/293 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NPN L+ +IN R D + +M + C D F YN + + G + A
Sbjct: 368 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCG-PDIFTYNTLILGLCKKGYLVSA 426
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E + +M C P+V T+ ++++ E + + + G+ ++A N L+
Sbjct: 427 RELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISA 486
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC++ ++ A + + + C+P++ T+++L+ GLC+ EEA GL + M EG+ A+
Sbjct: 487 LCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIAN 546
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+T+N LI ++G ++E +KL+ M +GC + +Y ++ L + L
Sbjct: 547 TITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFE 606
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + ++P+ +S LI+GLC ++ L+ M+ +G P + + ++
Sbjct: 607 DMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLI 659
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 163/327 (49%), Gaps = 8/327 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
++P ++ K+ D + + + +K Y +Y ++I+KL A F + ++
Sbjct: 94 ITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLM 153
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFNLVLNLLV 174
++K E + F + F ++K YG AG +A L DM Y+C P+ +++N+VL++L+
Sbjct: 154 QMKQEGIV-FRESLFILIMKHYGR-AGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLL 211
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
+ + ++ G+ +++K LC +++A +L + + C PN
Sbjct: 212 AGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAI 271
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y TL+H L + G V E LLE M G D TFN I GL K ++ E KL++RM
Sbjct: 272 VYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRM 331
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+G PNS +Y +++GL + EA+ L+ ++ +P+ V + LI+G ++ +
Sbjct: 332 LLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV----PNPNVVLFNTLINGYVSRGRL 387
Query: 355 EDVDWVL-KKMVQQGFVPRMGMWREIV 380
++ V+ + M+ G P + + ++
Sbjct: 388 DEAKAVMHESMLSVGCGPDIFTYNTLI 414
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 7/166 (4%)
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
C D + +IK AG I K + DM S P+ + N+++N L G I
Sbjct: 578 CPLDDITYNGLIKALCR-AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT---GNI 633
Query: 183 QGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
Q + G+ D N L+ GLC+ G + A + D+ + P+ TY+TL
Sbjct: 634 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 693
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
+ C++G ++A LL R G + VT+ IL+S K+G E
Sbjct: 694 ISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 154/322 (47%), Gaps = 6/322 (1%)
Query: 63 KIFSNLR---DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
++ + LR DP + + +LN R+D+ P+ A+Y II KL A FD +E +++ ++
Sbjct: 58 RLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRR 117
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKL 178
E G + ++ Y + R A++ + + + ++ +N +LN+L
Sbjct: 118 EGH-EAGAGVVRSFVESYARLR-RFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSR 175
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
++ +Y G++ D LN L+K LC + A +L+E P+ T++T
Sbjct: 176 MKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTT 235
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
LM G E+G++E A + +M G VT N+LI+G K G+VE+ + +++ G
Sbjct: 236 LMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADG 295
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
P+ +Y ++ L A +++ M+ E P +Y +I+ L +++
Sbjct: 296 FEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAK 355
Query: 359 WVLKKMVQQGFVPRMGMWREIV 380
++ +MV +G +P + ++
Sbjct: 356 GIVNQMVDRGCLPDTTTFNTLI 377
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 136/289 (47%), Gaps = 12/289 (4%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-----FYNVIKIYGNMAG 142
+P ++IN + R +ED + I+ E +DGF YN G
Sbjct: 262 SPTRVTVNVLINGYCKMGR---VEDALGYIQKE----IADGFEPDQVTYNTFVHCLCQNG 314
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+S A++ + M P V T+N V+N L E +GI G D N
Sbjct: 315 HVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFN 374
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ LC LE A + E + P+V T++ L++ LC+ G+ L E M+S
Sbjct: 375 TLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSS 434
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D VT+NILI L GK+ + LL+ M+ GC ++ +Y ++ L + R EA
Sbjct: 435 GCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEA 494
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+E+ +M +S S V++ LI GLC K ++D ++++MV++G P
Sbjct: 495 EEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQP 543
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 128/283 (45%), Gaps = 2/283 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P++ Y ++ L Q +M + E D F YN + + G + +
Sbjct: 296 FEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEG--HDPDVFTYNTVINCLSKNGELDE 353
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A + M C P TFN ++ L S E + G+ D NIL+
Sbjct: 354 AKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILIN 413
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G+ + +E C P+ TY+ L+ LC G + A LL+ MES G
Sbjct: 414 ALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPR 473
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
TVT+N +I L KQ ++EE ++ ++M G ++ ++ ++ GL KR +A EL+
Sbjct: 474 STVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELI 533
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+M+ E + PS ++Y ++ C Q ++ +L+ M GF
Sbjct: 534 EQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGF 576
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 135/266 (50%), Gaps = 4/266 (1%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN++ + G++ A++ L +M S C S T+N +++ L E + ++
Sbjct: 439 DEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF 498
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
G+ A N L+ GLC+ ++ A ++++ K+ +P+ TY++++ C++
Sbjct: 499 DQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQ 558
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G++++A +LE M + G + D VT+ LI+GL K G+ + +KLL M+ KG P +Y
Sbjct: 559 GDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 618
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC--NQKLVEDVDWVLKKM 364
V+ L + +A L M P ++YK + GLC + E D+ L +M
Sbjct: 619 NPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDF-LVEM 677
Query: 365 VQQGFVPRMGMWREIV-GCVTFGKDN 389
V +GF+P +R + G + G D+
Sbjct: 678 VNKGFMPEFSSFRMLAEGLLNLGMDD 703
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 144/299 (48%), Gaps = 6/299 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ ++P+ Y +IN L++ D + I+ ++ V++ C D +N + + R
Sbjct: 328 QEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM-VDRGC-LPDTTTFNTLIVALCSQNR 385
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI--YTSAAKLGVEIDACCL 201
+ +A++ ++ P V TFN+++N L K+ GI + G D
Sbjct: 386 LEEALDLARELTVKGLSPDVYTFNILINAL--CKVGDPHLGIRLFEEMKSSGCAPDEVTY 443
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ LC G L A +L E C + TY+T++ LC++ +EEA + ++M++
Sbjct: 444 NILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDA 503
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
GI VTFN LI GL K ++++ +L+E+M +G P++ +Y +L + +
Sbjct: 504 HGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKK 563
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +++ M V+Y LI+GLC + +L+ M +G P + ++
Sbjct: 564 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVI 622
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 161/314 (51%), Gaps = 4/314 (1%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
LSP VLK+ + ++P + ++ + ++ Y + +Y I+ +L++ + + + I++
Sbjct: 8 LSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVE 67
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFNLVLNLLV 174
I+ ++ C+ + +VIK YG + +A++ M + C P+++++N +LN V
Sbjct: 68 LIRSQE-CKCDEDVALSVIKTYGKNS-MPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
AK + +++ ++ GV + N+L+K C+ E A LD K+ +P+V
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER- 293
+YST+++ L + G +++A L + M G+ D +NILI G K+ + M+L +R
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
++ YPN ++ ++ GL R + ++ RM +Y LIHGLC+
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 354 VEDVDWVLKKMVQQ 367
V+ + V ++ ++
Sbjct: 306 VDKAESVFNELDER 319
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 133/287 (46%), Gaps = 7/287 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKA 147
PN + ++I+ L++ R D I +R+K + R D + Y+ + I+G AG + KA
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE--REKDLYTYSSL-IHGLCDAGNVDKA 309
Query: 148 IETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
++ V T+N +L K+ ++ K V I + NIL+K
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVS--YNILIK 367
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GL ENG ++ A + P + + TY +HGLC G V +A G+++ +ES G
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D + +I L K+ ++EE L++ M G NS ++ GL+ R EA +
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
M P+ VSY LI GLC + +K+M++ G+ P +
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 127/300 (42%), Gaps = 7/300 (2%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
D + + + Q + KD Y+ +I+ L A D E + + K D
Sbjct: 273 DCLKIWERMKQNEREKDLYT----YSSLIHGLCDAGNVDKAESVFNELDERKAS--IDVV 326
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN + G+I +++E M N ++ ++N+++ L+ E I+
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEHKNS-VNIVSYNILIKGLLENGKIDEATMIWRLM 385
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G D I + GLC NG + A V+ E +V Y++++ LC+K +
Sbjct: 386 PAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRL 445
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EEA L++ M G++ ++ N LI GL + ++ E L M GC P SY +
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ GL +F EA V M+ P +Y L+ GLC + ++ + + +Q G
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 121/300 (40%), Gaps = 2/300 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K Y ++ Y + I+ L + +MQ +VE D + Y I R+
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGYVNKALGVMQ--EVESSGGHLDVYAYASIIDCLCKKKRL 445
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A + +M + + N ++ L+ GE K G NIL
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+ G A + E + +P+++TYS L+ GLC ++ A L + G+
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ D + NILI GL GK+++ M ++ M+ + C N +Y ++ G A
Sbjct: 566 ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATV 625
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
+ G M + P +SY ++ GLC + V G P + W +V V
Sbjct: 626 IWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 88/186 (47%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN++ AG+ +A + +M P +KT++++L L + ++
Sbjct: 502 YNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ G+E D NIL+ GLC G L+ A V+ +NC N+ TY+TLM G + G+
Sbjct: 562 QSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSN 621
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A + M G+ D +++N ++ GL V M+ + + G +P ++ ++
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Query: 311 YGLLDK 316
++++
Sbjct: 682 RAVVNR 687
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 2/170 (1%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+LK L N AAF + D + + Y ++ L E V ++E + S+
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-GCYPNSASYQEVLYGLLDKKRFPE 321
D +I K ++ + + +RM+ GC P SY +L ++ K++ +
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVK 132
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ L ++P+ +Y LI C +K E L M ++GF P
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKP 182
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 67/174 (38%), Gaps = 39/174 (22%)
Query: 221 LDEFPKQ----NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
LD F + CEP +R+Y+TL++ E + L E+ G+ + T+N+LI
Sbjct: 98 LDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI- 156
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
+M K KK F +A+ + M E P
Sbjct: 157 ----------------KMSCK------------------KKEFEKARGFLDWMWKEGFKP 182
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
SY +I+ L ++D + +M ++G P + + ++ KD++
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 140/296 (47%), Gaps = 2/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN YT++I++ + R + +++ + + L + G YN + ++
Sbjct: 43 KGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG--YNCLISALCKDEKV 100
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+ DM S C P + TFN ++ L + E G+Y GV + N L
Sbjct: 101 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 160
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G ++ A ++++ + C + TY+ L+ LC GN+E+ L E M S+G+
Sbjct: 161 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 220
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ + ++ NILI+GL + G ++ ++ L M +G P+ +Y ++ GL R EA
Sbjct: 221 NPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 280
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L ++ E + P ++Y LI C + + +D +L + V GF+P W +V
Sbjct: 281 LFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILV 336
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 129/254 (50%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F YN + + G + A E + +M C P+V T+ ++++ E + +
Sbjct: 13 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 72
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G+ ++A N L+ LC++ ++ A + + + C+P++ T+++L+ GLC+
Sbjct: 73 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 132
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
EEA GL + M EG+ A+T+T+N LI ++G ++E +KL+ M +GC + +Y
Sbjct: 133 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 192
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ L + L M+ + ++P+ +S LI+GLC ++ L+ M+
Sbjct: 193 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 252
Query: 367 QGFVPRMGMWREIV 380
+G P + + ++
Sbjct: 253 RGLTPDIVTYNSLI 266
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 101/184 (54%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
++ S +G D N L+ GLC+ G L +A +++E + CEPNV TY+ L+ C
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G +EEA +L+ M +G+ + V +N LIS L K KV++ + + M KGC P+
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ +++GL +F EA L M+ E + + ++Y LIH + +++ ++ M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180
Query: 365 VQQG 368
+ +G
Sbjct: 181 LFRG 184
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 80/152 (52%)
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
C P++ TY+TL+ GLC+KG + A L+ M+ +G + + +T+ ILI K+G++EE
Sbjct: 10 CGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEAR 69
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+L+ M GKG N+ Y ++ L ++ +A + G M + P ++ LI GL
Sbjct: 70 NVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 129
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C E+ + + M+ +G + + ++
Sbjct: 130 CKVNKFEEALGLYQDMLLEGVIANTITYNTLI 161
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%)
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E M S G D T+N LI GL K+G + +L+ M+ KGC PN +Y ++ +
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
R EA+ ++ M + ++ + V Y LI LC + V+D + M +G P + +
Sbjct: 63 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122
Query: 377 REIV 380
++
Sbjct: 123 NSLI 126
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEID 197
AG I K + DM S P+ + N+++N L G IQ + G+ D
Sbjct: 202 AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT---GNIQHALEFLRDMIHRGLTPD 258
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+ GLC+ G + A + D+ + P+ TY+TL+ C++G ++A LL
Sbjct: 259 IVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 318
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVE 285
R G + VT+ IL+S K+G E
Sbjct: 319 RGVDSGFIPNEVTWYILVSNFIKEGDQE 346
>gi|356531124|ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g05600-like [Glycine max]
Length = 502
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 159/324 (49%), Gaps = 11/324 (3%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKR-KDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
L+PT + +I ++P+ +++ N+ R +Y N +Y +I+ L + R + + D++
Sbjct: 9 LTPTYLSQIIKTQKNPLKALNIFNEAKSRYPNYYHNGPVYATMISILGTSGRLNEMRDVI 68
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+++K E C D F +VIK Y N AG + +AI +P +NC ++FN +L ++V
Sbjct: 69 EQMK-EDSCECKDSVFVSVIKTYAN-AGLVDEAISLYKSIPRFNCVNWTESFNTMLQIMV 126
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDAC--CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
++ ++ G E+ + LN+L+ LC+ + A + E Q+C PN
Sbjct: 127 KENRLEIAHRLFVESS-CGWEVRSLVRALNLLMYALCQKSRSDLALQLFQEMDYQSCYPN 185
Query: 233 VRTYSTLMHGLCEKGNVEEA----FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
+Y+ LM GLC+ + EA + + R+ +G D V + L+ L GK EE
Sbjct: 186 RDSYAILMKGLCQDRRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDAGKFEEAE 245
Query: 289 KLLERMKGKGC-YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
++L ++ KG P + L L D K AK ++ + + PS SY +
Sbjct: 246 EILGKILRKGLKAPKRCHSRLDLDQLSDGKDIESAKRMIHEALIKGSVPSLASYNAMAVD 305
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVP 371
L ++ +++ D V+ +M +GF P
Sbjct: 306 LYSEGKIDEADKVIIEMQVRGFKP 329
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 112/277 (40%), Gaps = 27/277 (9%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRI-----KVEKLC-------RFSDGFFYNVIKIYGNM 140
+Y +++ L A +F+ E+I+ +I K K C + SDG
Sbjct: 227 VYRTLLDALCDAGKFEEAEEILGKILRKGLKAPKRCHSRLDLDQLSDG------------ 274
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
I A + + PS+ ++N + L S E + G +
Sbjct: 275 -KDIESAKRMIHEALIKGSVPSLASYNAMAVDLYSEGKIDEADKVIIEMQVRGFKPTHSI 333
Query: 201 LNILLKGLCENGNLEAAFYVLDE-FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+ LC+ ++ A V++E K NC P + Y+ L+ LC GN L +M
Sbjct: 334 FEAKVAALCKVSKVDEAIKVIEEDMVKVNCLPTAKVYNILLKNLCNVGNSTAILESLNKM 393
Query: 260 ESE-GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
S+ G D T++IL+ L + + E +LLE+M K +P + SY ++ GL R
Sbjct: 394 SSKVGCTGDRDTYSILLEMLCGERRYLEASQLLEKMSIKSYWPCTNSYNSLIRGLCSIGR 453
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
EA + MI + P + L CN + ++
Sbjct: 454 QYEAVMWLEDMISQGKLPEISVWNSLASLFCNSEKIK 490
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER-ME 260
N + L G ++ A V+ E + +P + + LC+ V+EA ++E M
Sbjct: 300 NAMAVDLYSEGKIDEADKVIIEMQVRGFKPTHSIFEAKVAALCKVSKVDEAIKVIEEDMV 359
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-GCYPNSASYQEVLYGLLDKKRF 319
+NIL+ L G ++ L +M K GC + +Y +L L ++R+
Sbjct: 360 KVNCLPTAKVYNILLKNLCNVGNSTAILESLNKMSSKVGCTGDRDTYSILLEMLCGERRY 419
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
EA +L+ +M + P SY LI GLC+ + E V W L+ M+ QG +P + +W
Sbjct: 420 LEASQLLEKMSIKSYWPCTNSYNSLIRGLCSIGRQYEAVMW-LEDMISQGKLPEISVWNS 478
Query: 379 IVG 381
+
Sbjct: 479 LAS 481
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 142 GRISKAIETLF-DMPSYNCWPSVKTFNLVL-NLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
++ +AI+ + DM NC P+ K +N++L NL ++ + ++K+G D
Sbjct: 345 SKVDEAIKVIEEDMVKVNCLPTAKVYNILLKNLCNVGNSTAILESLNKMSSKVGCTGDRD 404
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+ILL+ LC A +L++ ++ P +Y++L+ GLC G EA LE M
Sbjct: 405 TYSILLEMLCGERRYLEASQLLEKMSIKSYWPCTNSYNSLIRGLCSIGRQYEAVMWLEDM 464
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
S+G + +N L S K++ + R++
Sbjct: 465 ISQGKLPEISVWNSLASLFCNSEKIKVSSETFSRLRS 501
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 138/289 (47%), Gaps = 3/289 (1%)
Query: 84 RKDYNPNEALYTLIINKLA-QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
R Y P+ Y +IN L + ++ D + ++ + L D YN I + A
Sbjct: 195 RGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLS--PDVVTYNSIISALSKAR 252
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ KA L M P+ T N +L+ S+ + G++ + GVE D N
Sbjct: 253 AMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYN 312
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ LC+NG A + D K+ +PN TY TL+HG +G++ + LL+ M
Sbjct: 313 TLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRN 372
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI D FNILI K GKV++ M L +M+ +G P++ +Y V+ L + +A
Sbjct: 373 GIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDA 432
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
GR+I E ++P V ++ LIHGLC + + + + +M+ +G P
Sbjct: 433 MAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICP 481
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 127/281 (45%), Gaps = 2/281 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R P+ ++ ++I + + D + +++ + L D Y ++ M G+
Sbjct: 371 RNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLN--PDTVTYGIVMDALCMVGK 428
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ + S P F +++ L + + + + + G+ + N
Sbjct: 429 VDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNT 488
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL LC+ G + A + D + + + +V TY+TL+ G C G V+EA LLE M +G
Sbjct: 489 LLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDG 548
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + VT+N +I+G K G++E+ L +M KG P +Y +L GL +R AK
Sbjct: 549 VKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAK 608
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
EL MI + +Y ++ GLC +D + + +
Sbjct: 609 ELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNL 649
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 128/300 (42%), Gaps = 8/300 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAK---RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
++ + PN A Y +++ A + + D+M R ++ D + +N++
Sbjct: 336 KRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQ-----PDHYIFNILIGTYTK 390
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ A+ M P T+ +V++ L + + G+ DA
Sbjct: 391 HGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVV 450
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ GLC + A + E + PN ++TL++ LC++G V A + + M
Sbjct: 451 FRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMV 510
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ D +T+N LI G GKV+E KLLE M G PN +Y ++ G R
Sbjct: 511 RVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIE 570
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A L +M + ++P V+Y ++ GL + + M++ G +G + I+
Sbjct: 571 DAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIIL 630
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 158/398 (39%), Gaps = 66/398 (16%)
Query: 29 RTFALASPSASHQDSDHHAY-KLNHKDWLSPTEVLKIFSNLRD-----PISVISVLNQYS 82
R A A+ + SH HHA+ +L H+ + + ++ + L D P IS+ +
Sbjct: 25 RQEAAAAGTDSHHA--HHAFDELLHRP--TTSSIVDLNRALSDAARHSPAVAISLFRRMV 80
Query: 83 --KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
R PN Y+++I+ ++ D + R+ G+ I +
Sbjct: 81 MVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRV-------IRSGWTAEAITFSPLL 133
Query: 141 AG-----RISKAIE-TLFDMPSYNCWPSVKTFNLVLNLLVSAK-----LYGEIQGIYTSA 189
R S+A++ L MP C P+V ++ ++L L L+ +
Sbjct: 134 KALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADD 193
Query: 190 AKLGVEIDACCLNILLKGLCENG-NLEAAFYVLDEFPKQNCEPNVRTY------------ 236
+ G D N ++ GL G L+ A+++ D+ Q P+V TY
Sbjct: 194 TRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARA 253
Query: 237 -----------------------STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++L+HG C G +A G+ +RM +G++ D T+N
Sbjct: 254 MDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNT 313
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ L K G+ E K+ + M +G PNSA+Y +L+G + + L+ M+
Sbjct: 314 LMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNG 373
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P + LI V+D + KM +QG P
Sbjct: 374 IQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNP 411
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 142/301 (47%), Gaps = 18/301 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ ++ +I+ L ++D E++ + +C + F+N + + G +++A
Sbjct: 446 PDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGIC--PNNIFFNTLLNHLCKEGMVARA- 502
Query: 149 ETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-------GVEIDACC 200
+ +FD M + V T+N +++ L+G++ AAKL GV+ +
Sbjct: 503 KNIFDLMVRVDVQRDVITYNTLID---GYCLHGKVD----EAAKLLEGMVLDGVKPNEVT 555
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ G C+NG +E AF + + + P + TYST++ GL + A L M
Sbjct: 556 YNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMI 615
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI D T+NI++ GL + ++ +++ + + + + ++ ++ LL R
Sbjct: 616 KSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHD 675
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EAK+L ++ + P+ V+Y ++ L Q L+E++D + + + G M +V
Sbjct: 676 EAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALV 735
Query: 381 G 381
G
Sbjct: 736 G 736
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PN+ TYS ++ G+++ AF L R+ G A+ +TF+ L+ L + + E M +
Sbjct: 89 PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148
Query: 291 -LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS-----PSFVSYKKL 344
L RM GC PN SY +L GL D+ R +A L+ M+ + P VSY +
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTV 208
Query: 345 IHGLCNQKLVEDVDW-VLKKMVQQGFVPRMGMWREIVGCVT 384
I+GL + D + + +M+ QG P + + I+ ++
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALS 249
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 33/267 (12%)
Query: 89 PNEALYTLIINKLAQ---AKRFDAIEDIMQRI--------------------KVEKLCRF 125
PN + ++N L + R I D+M R+ KV++ +
Sbjct: 481 PNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKL 540
Query: 126 SDGFFYNVIK----IYGNMA------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
+G + +K Y M GRI A M S P + T++ +L L
Sbjct: 541 LEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQ 600
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
A+ + +Y K G++ D NI+L GLC+N + A + + RT
Sbjct: 601 ARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRT 660
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
++ ++ L + G +EA L + + G+ + VT+ +++ L +QG +EE L ++
Sbjct: 661 FNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLE 720
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEA 322
GC NS ++ LL K +A
Sbjct: 721 KNGCTANSRMLNALVGKLLQKGEVRKA 747
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 88/202 (43%), Gaps = 3/202 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K NP Y+ I+ L QA+R A +++ + ++ +F G YN+I +
Sbjct: 582 KGVNPGIVTYSTILQGLFQARRTAAAKELYLWM-IKSGIKFDIGT-YNIILLGLCQNNCT 639
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+ ++ + +TFN++++ L+ + E + ++ S G+ + ++
Sbjct: 640 DDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLM 699
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+K L E G LE + K C N R + L+ L +KG V +A L +++
Sbjct: 700 MKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNF 759
Query: 265 DADTVTFNILISGLRKQGKVEE 286
+ T L+ L GK ++
Sbjct: 760 SLEASTAESLVL-LVSSGKYDQ 780
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 135/296 (45%), Gaps = 36/296 (12%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
DG Y ++ AG +S A+ +M C P V T+N +LN L + + +G+
Sbjct: 15 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 74
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL--- 243
+ GV D C L+ G C G L+ A + D Q P++ TY+TL+ G+
Sbjct: 75 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 134
Query: 244 --------------------------------CEKGNVEEAFGLLERMESEGIDADTVTF 271
CEKG VE+AFG L+ M ++GI + +T+
Sbjct: 135 GDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTY 194
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N +I G + G V +G K L++M P+ +Y +++G + + + +A +L+ M
Sbjct: 195 NSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEK 254
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-RMGMWREIVGCVTFG 386
E++ P V+Y LI+G V++ W+ +KM +G P R I G VT G
Sbjct: 255 EKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAG 310
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 96/189 (50%)
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ D +++ G C G + A V DE C P+V TY+TL++GLC++ + +
Sbjct: 10 FGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD 69
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A GLL M G+ D TF LI G +GK+++ ++L + M + P+ +Y ++
Sbjct: 70 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 129
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G+ + +A +L M + P+ V+Y LI C + VED L +M+ +G +P
Sbjct: 130 GMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 189
Query: 372 RMGMWREIV 380
+ + I+
Sbjct: 190 NIMTYNSII 198
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 110/230 (47%)
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
L +M + P + +V+ A L + + G D N LL GLC+
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
L A +L+E ++ P++ T++TL+HG C +G +++A L + M ++ + D VT
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+N LI G+ +QG +++ L + M + +PN +Y ++ +K + +A + MI
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P+ ++Y +I G C V L+KM+ P + + ++
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 233
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 45/288 (15%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVE----KLCRFSDGFFYNVIKIYGNMAGRI 144
P+ Y ++N L + +R E ++ ++ LC F+ +I Y + G++
Sbjct: 49 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFT-----TLIHGYC-IEGKL 102
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA++ M + P + T+N +++ + + ++ + + +IL
Sbjct: 103 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 162
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV--------------- 249
+ CE G +E AF LDE + PN+ TY++++ G C GNV
Sbjct: 163 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 222
Query: 250 --------------------EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+AF LL ME E + D VT+N+LI+G G V+E
Sbjct: 223 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 282
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
+ E+M KG P+ +Y ++ G + EA +L M+ +P
Sbjct: 283 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
M L M+ G P+ Y V+ G +A + M+ P V+Y L++G
Sbjct: 1 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LC ++ + D + +L +M ++G P + + ++
Sbjct: 61 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLI 93
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 148/300 (49%), Gaps = 5/300 (1%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
NLRD + V ++ S+ PN Y+++I+ L + R + + ++ EK C+ S
Sbjct: 245 NLRDALKVFDLM---SREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG-EKGCQPS 300
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+ +IK + G I KA +M + C P+V T+ ++++ L E G+
Sbjct: 301 TRTYTVLIKALCD-RGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
K G+ N L+ G C++G + AF +L K+ C+PNVRT++ LM GLC
Sbjct: 360 RKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G +A LL+RM G+ D V++N+LI GL ++G + KLL M P+ ++
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTF 479
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ + + A +G M+ + +S V+ LI G+CN D ++L+ +V+
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVK 539
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 10/212 (4%)
Query: 186 YTSAA--------KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTY 236
YT AA K+G +D+ + LL G C NL A V D ++ C PN +Y
Sbjct: 210 YTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSY 269
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
S L+HGLCE G +EEAFGL ++M +G T T+ +LI L +G +++ L + M
Sbjct: 270 SILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIA 329
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+GC PN +Y ++ GL + EA + +M+ + + PS ++Y LI+G C V
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVP 389
Query: 357 VDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
+L M ++ P + + E++ G GK
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 136/307 (44%), Gaps = 17/307 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------G 142
PN YT++I+ L + + + + +++ DG F +VI Y + G
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKM-------VKDGIFPSVIT-YNALINGYCKDG 385
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ A E L M C P+V+TFN L+ L K Y + + G+ D
Sbjct: 386 RVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH-LLKRMLDNGLSPDIVSY 444
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+L+ GLC G++ A+ +L + EP+ T++ +++ C++G + A L M
Sbjct: 445 NVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI D VT LI G+ GK + + +LE + S +L L + E
Sbjct: 505 KGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKE 564
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV- 380
++G++ + PS V+Y L+ GL + +L+ M G +P + + I+
Sbjct: 565 ELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIIN 624
Query: 381 GCVTFGK 387
G FG+
Sbjct: 625 GLCQFGR 631
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 11/290 (3%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D P+ +T IIN + + D + + + K + +I N+ G+
Sbjct: 471 DLEPDCLTFTAIINAFCKQGKADVASAFLG-LMLRKGISLDEVTGTTLIDGVCNV-GKTR 528
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A+ L + + + N++L++L E + KLG+ L+
Sbjct: 529 DALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GL +G++ +F +L+ C PNV Y+ +++GLC+ G VEEA LL M+ G+
Sbjct: 589 DGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG-LLDKKRFPEA-- 322
+ VT+ +++ G GK++ ++ + M +G N Y +L G +L +K E
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDP 708
Query: 323 ---KELVGRMICERMSPSFVSYKK-LIHGLCNQKLVEDVDWVLKKMVQQG 368
KEL+ + E++ S L+ LC + ++ + +++ +++ G
Sbjct: 709 ECIKELIS--VVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSG 756
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 7/242 (2%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G IS + L M C P+V + +++N L E + + ++ GV +
Sbjct: 594 SGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG--LCEKGNVEEAFGLLER 258
+++KG NG L+ A + ++ E N R YS+L+ G L +KG E ++
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKE 713
Query: 259 MES--EGIDADTVTFNI-LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+ S E + T I L++ L K+G+ +E L++ + G + A ++
Sbjct: 714 LISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKA-IDIIMESYCS 772
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV-DWVLKKMVQQGFVPRMG 374
KK+ + EL+ ++ PSF S+ +I GL + E + V++ + G V + G
Sbjct: 773 KKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSG 832
Query: 375 MW 376
+
Sbjct: 833 VL 834
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 36/185 (19%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE------ 285
N YS+L+ L + A+ RME++G + + +++ L K G E
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 286 -----------------------------EGMKLLERMKGKG-CYPNSASYQEVLYGLLD 315
+ +K+ + M +G C PNS SY +++GL +
Sbjct: 219 CKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCE 278
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
R EA L +M + PS +Y LI LC++ L++ + +M+ +G P +
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHT 338
Query: 376 WREIV 380
+ ++
Sbjct: 339 YTVLI 343
>gi|356510096|ref|XP_003523776.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g18475-like [Glycine max]
Length = 640
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 147/319 (46%), Gaps = 47/319 (14%)
Query: 89 PNEALYTLIINKLAQAKR----FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
PN Y+ ++ L + R F+ E+++ R + D YNV+ G+
Sbjct: 361 PNLFTYSTFMDGLCRNGRVKEAFELFEEMVSRDHI-----VPDPLTYNVLINEFCRRGKP 415
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A + M S C+P+V ++ L
Sbjct: 416 DRARNVIEFMKSNRCYPNVYNYS-----------------------------------AL 440
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+ G LE A VL E +P+ TY++L++ LC G + EA GLL+ ++
Sbjct: 441 VDGLCKVGKLEDAKGVLAEMKGSGLKPDTVTYTSLINFLCRNGQIGEAMGLLKEIKENTC 500
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
ADTVTFN+++ GL ++ + EE + +LE++ +G Y N SY+ VL L K +AKE
Sbjct: 501 QADTVTFNVILGGLCREDRFEEALDMLEKLPQQGVYLNKGSYRIVLNSLTQKCELKKAKE 560
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
L+G M+ P + + +L+ LC +V+D L +V+ GF P + W ++G +
Sbjct: 561 LLGLMLSRGFRPHYATSNELLVCLCKAGMVDDAAVALFYLVEMGFQPGLESWEVLIGLIC 620
Query: 385 FGKDNRNRVYVTETVDSLA 403
R +YV E ++ L
Sbjct: 621 ---RERKLLYVFELLNELV 636
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 53 KDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDY-NPNEALYTLIINKLAQAKRFDAIE 111
+ ++S + + +D + + N S++ + + + A Y I+ KLA +F A+
Sbjct: 48 RKYISHDSAIDLIKCEKDSQHTLKIFNMVSEQNGFQHGSNATYATILEKLACCYKFHAVH 107
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSV--KTFNLV 169
++ ++ E C+F +G F N++K + + K + F + P V K +
Sbjct: 108 CVLHQMAYET-CKFHEGIFVNLMKHFSKSSIH-EKVLHAFFSI-----QPIVREKPXSTC 160
Query: 170 LNLLVSAKLYGEIQGIYTSAAK-LGVEIDACCLNILLKGLCENGNLEAAFYVLDE 223
LNLL + + + A + L + + C NIL+K C+NG+L++AF V+ E
Sbjct: 161 LNLLQDSNRVDLARKLLLHAKRGLTHKPNTCVFNILVKYHCKNGDLDSAFEVVKE 215
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 157/332 (47%), Gaps = 12/332 (3%)
Query: 41 QDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINK 100
+D HH L+ + T VL F N D +S ++ +RK + YT +IN
Sbjct: 353 EDMVHHKVILDEAVY---TTVLSGFCNKGDLVSARRWFDEM-QRKGLATDGVTYTTLING 408
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCW 160
L +A E ++Q + +L D Y V+ G++++A + M
Sbjct: 409 LCRAGELKEAEKVLQEMLARRL--DVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVA 466
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
P+V T+ + + L G++Q + + G+E++AC N L+ GLC+ G L+ A
Sbjct: 467 PNVVTYTALSDGLCKQ---GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQA 523
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+ + +P+V TY+TL+ LC+ G ++ A LL+ M GI VT+N+L++G
Sbjct: 524 MRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNG 583
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
G+VE G KLLE M K +PN+ +Y ++ E+ M + P+
Sbjct: 584 FCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPN 643
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+Y LI G C + +++ + +M+++GF
Sbjct: 644 ENTYNILIKGHCKARSMKEAQYFHNEMIEKGF 675
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 135/292 (46%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +YT ++ L R +++ + K+ + + V+ + N G + A
Sbjct: 327 PNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVI-LDEAVYTTVLSGFCN-KGDLVSAR 384
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M T+ ++N L A E + + +++D +L+ G
Sbjct: 385 RWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGY 444
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G + AF V + ++ PNV TY+ L GLC++G+V+ A LL M ++G++ +
Sbjct: 445 CKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNA 504
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N LI+GL K G +++ M+ + M G P+ +Y ++ L A +L+
Sbjct: 505 CTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQE 564
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + P+ V+Y L++G C VE +L+ M+++ P + ++
Sbjct: 565 MLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLM 616
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 7/228 (3%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +AIE +P N V ++N++L +L A G ++ ++ D I
Sbjct: 247 LDEAIELFQGLPDKN----VCSYNILLKVLCGA---GRVEDARQLFDEMASPPDVVTYGI 299
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C G LE A +LD+ + EPN Y++++ LC+KG V +A ++E M
Sbjct: 300 LIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHK 359
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D + ++SG +G + + + M+ KG + +Y ++ GL EA+
Sbjct: 360 VILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAE 419
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+++ M+ R+ V+Y L+ G C + + + V MVQ+G P
Sbjct: 420 KVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAP 467
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 132/288 (45%), Gaps = 14/288 (4%)
Query: 90 NEALYTLIIN------KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+EA+YT +++ L A+R+ D MQR + +DG Y + AG
Sbjct: 363 DEAVYTTVLSGFCNKGDLVSARRW---FDEMQRKGLA-----TDGVTYTTLINGLCRAGE 414
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A + L +M + T+ ++++ E ++ + + GV +
Sbjct: 415 LKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTA 474
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L GLC+ G+++AA +L E + E N TY++L++GLC+ G +++A + M++ G
Sbjct: 475 LSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAG 534
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D T+ LI L K G+++ LL+ M G P +Y ++ G R K
Sbjct: 535 LKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGK 594
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L+ M+ + + P+ +Y L+ C ++ + K M + P
Sbjct: 595 KLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEP 642
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 119/242 (49%), Gaps = 9/242 (3%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYT 187
YN++ AGR+ A + +M S P V T+ ++++ + GE++ +
Sbjct: 265 YNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCA---LGELENAVKLLD 318
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
GVE +A ++ LC+ G + A V+++ + Y+T++ G C KG
Sbjct: 319 DMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKG 378
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ A + M+ +G+ D VT+ LI+GL + G+++E K+L+ M + + +Y
Sbjct: 379 DLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYT 438
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + + EA ++ M+ ++P+ V+Y L GLC Q V+ + +L +M +
Sbjct: 439 VLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK 498
Query: 368 GF 369
G
Sbjct: 499 GL 500
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 2/241 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN YT + + L + A +++ + + L + YN + AG + +A+
Sbjct: 467 PNVVTYTALSDGLCKQGDVQAANELLHEMSNKGL--ELNACTYNSLINGLCKAGYLDQAM 524
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
T+ DM + P V T+ +++ L + + G++ N+L+ G
Sbjct: 525 RTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGF 584
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +G +E +L+ ++N PN TY++LM C N++ + + M S ++ +
Sbjct: 585 CMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNE 644
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+NILI G K ++E M KG ++SY ++ L KK+F EA++L
Sbjct: 645 NTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHD 704
Query: 329 M 329
M
Sbjct: 705 M 705
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 12/211 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-----FYNVIKIYGNMAGR 143
P+ YT +I+ L ++ D D++Q + +G YNV+ M+GR
Sbjct: 537 PDVYTYTTLIDALCKSGELDRAHDLLQEM-------LDNGIKPTIVTYNVLMNGFCMSGR 589
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ + L M N P+ T+N ++ IY VE + NI
Sbjct: 590 VEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNI 649
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+KG C+ +++ A Y +E ++ +YS L+ L +K EA L M EG
Sbjct: 650 LIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEG 709
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERM 294
A+ +N I + +E + L + +
Sbjct: 710 FTAEPDVYNFYIDFNFNEDNLEATLALCDEL 740
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL R+ GI N ++S L ++E ++L + + K N SY +L L
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLPDK----NVCSYNILLKVLC 273
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
R +A++L M P V+Y LIHG C +E+ +L MV +G P
Sbjct: 274 GAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNAT 330
Query: 375 MWREIVG 381
++ +V
Sbjct: 331 VYTSVVA 337
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 184/375 (49%), Gaps = 16/375 (4%)
Query: 3 LRSHFARNHRQSIIQSLSSASTITRKR-TFALASPSASHQDSDHHAYKLNHKDWLSPTEV 61
+R +F N ++I SL + +I R FA+ +P S+ + K W
Sbjct: 1 MRCYFRSNRFKNI--SLHTPISIVPLRFIFAVETPLQSYTVTPPI------KPWPQRLFP 52
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDYNP----NEALYTLIINKLAQAKRFDAIEDIMQRI 117
++ + +R ++ L + Y+P N Y II +L++A+ F+ +E ++ +
Sbjct: 53 NRLVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLEL 112
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
+ + S+ F VI+ YG +A R A++T + ++ SV++ N +LN LV
Sbjct: 113 QDSGI-NCSEDLFITVIRSYG-LASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNN 170
Query: 178 LYGEIQGIYT-SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ + ++ S +K GV + NIL+K LC+ ++E A V DE P PNV TY
Sbjct: 171 RFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTY 230
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+T++ G +G++ A + + G D T+ IL+ G KQG+ + +K+++ M+
Sbjct: 231 TTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEE 290
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
G PN +Y ++ G +++ EA L+ M+ ++ P+ K+I LC + V++
Sbjct: 291 NGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKE 350
Query: 357 VDWVLKKMVQQGFVP 371
+ +K++++ P
Sbjct: 351 ACKMWEKLLKKNCTP 365
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 3/230 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA-AKLGVEIDACC 200
GR + A++ + +M P+ T+ +++ + GE + K + A C
Sbjct: 276 GRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALC 335
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
++ LC G ++ A + ++ K+NC P+ STL+H LC++GN+ EA L E
Sbjct: 336 CKVI-DVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFE 394
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G + +T+N LI+G+ + G++ E +L + M KGC PN +Y ++ G L +
Sbjct: 395 -RGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAK 453
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
E ++V M+ + + +Y L+ GL E++ +L ++ G V
Sbjct: 454 EVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISSGAV 503
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 113/230 (49%), Gaps = 11/230 (4%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
P+ YT++++ + RF DA++ D M+ VE + Y VI I G R S
Sbjct: 260 PDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVE-----PNDITYGVI-ILGYCKERKS 313
Query: 146 -KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ L DM P+ V+++L E ++ K D + L
Sbjct: 314 GEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTL 373
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ LC+ GN+ A + +EF + ++ TY+TL+ G+CE G + EA L + M +G
Sbjct: 374 IHWLCKEGNIWEARKLFNEFERGTIS-SLLTYNTLIAGMCEMGELCEAARLWDDMLEKGC 432
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ T+N+LI G K GK +E +K++E M KGC N ++Y ++ GLL
Sbjct: 433 VPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLL 482
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 152/314 (48%), Gaps = 22/314 (7%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQR-IKVEKLC--RFSDGFFYNVIKIYGNMAGRI 144
+PN ++ +I L A R + ++ +R + VE + RF+ F + G+ + R+
Sbjct: 378 SPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGD-SRRL 436
Query: 145 SKAIETLFD--------MPSYN----------CWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+ E + + P ++ C P++ T+N ++ L + + + G+
Sbjct: 437 EQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLL 496
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G+ D N +L GLC+ + A V ++ C PNV TYSTL+ GL +
Sbjct: 497 EFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKM 556
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
++EA LL +M G A+TVT++ ++ GL K G++E+ + +L +M+ GC P++ +Y
Sbjct: 557 AKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTY 616
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ G ++R EA L+ M+ PS V+Y L HGLC ++ +L M
Sbjct: 617 NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 676
Query: 367 QGFVPRMGMWREIV 380
+G P + IV
Sbjct: 677 RGCAPNAITYSSIV 690
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 147/285 (51%), Gaps = 14/285 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRIS 145
+ P+ Y +++ L +A R +A ++Q + E S F I + G + AG ++
Sbjct: 172 FTPDAVTYNTMVDGLYKAGRLEAAGMVLQLL-AESFS--SPTVFTFTIAVDGLSKAGNLT 228
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSA-KLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A E MP P+ T++ +++ L A KL + + ++ G+ + L
Sbjct: 229 GAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMF----AFSSL 284
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GLC+ LE A +L P C PNV +++LM+GLC+ V+EAF L + M+ G
Sbjct: 285 LHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGC 341
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
AD +T+NIL+ GL K ++ E + +E M + +GC PN ++ ++ GL + R +A
Sbjct: 342 SADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAW 401
Query: 324 ELVGRMIC-ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
E+ RM+ E +SP+ +Y L+ GLC ++ ++M+++
Sbjct: 402 EVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLER 446
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 146/295 (49%), Gaps = 22/295 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGR 143
+ + P+ ++T++++ L + R D Q++ L F+ D YN + AGR
Sbjct: 135 RGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVL---LIGFTPDAVTYNTMVDGLYKAGR 191
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY---TSAAKLGVEIDACC 200
+ A L + P+V TF + ++ L A G + G Y S + GV +
Sbjct: 192 LEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKA---GNLTGAYEFFDSMPQTGVSPNTVT 248
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L+ GLC+ G L+ A +L + +N + + +S+L+HGLC+ +EEA LL+ M
Sbjct: 249 YDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP 305
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ V FN L++GL + +V+E +L + MK GC + +Y +L GL +R P
Sbjct: 306 CV---PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIP 362
Query: 321 EAK---ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ-QGFVP 371
EA EL+ R E SP+ V++ LI GLCN V V ++MV +G P
Sbjct: 363 EAYRHVELMRRT--EGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISP 415
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 14/262 (5%)
Query: 94 YTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-----RISKA 147
Y ++IN L +A R DA + I+ GF V+ + G + K
Sbjct: 4 YNVLINGLCKAGRVCDAFTAFRKAIQF--------GFRPTVVTYSTVIDGLCRDNEVDKG 55
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L +M C P+ T+N ++N L+ E + A G + +++KG
Sbjct: 56 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKG 115
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G +EAAF V+DE + P+V ++ L+H LCE G V+EA+ +++ G D
Sbjct: 116 LCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPD 175
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+N ++ GL K G++E +L+ + P ++ + GL A E
Sbjct: 176 AVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFD 235
Query: 328 RMICERMSPSFVSYKKLIHGLC 349
M +SP+ V+Y LI GLC
Sbjct: 236 SMPQTGVSPNTVTYDALIDGLC 257
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 115/240 (47%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN + + +G + A+ L M P V TFN VL+ L + + ++ A
Sbjct: 476 YNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRAL 535
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ G + + L+ GL + ++ A +L + + C N TYST++ GL + G +E
Sbjct: 536 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 595
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A +L +M G D VT+N LI G K+ ++ E + LL M G +P+ +Y +
Sbjct: 596 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC 655
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+GL RF EA E++ M +P+ ++Y ++ GLC V + +KM + V
Sbjct: 656 HGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVV 715
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 131/308 (42%), Gaps = 39/308 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y+ +I+ L++ + D ++ ++ VE CR + + V+ + GR+ A+
Sbjct: 541 PNVVTYSTLIDGLSKMAKMDEALQLLAKM-VELGCRANTVTYSTVVDGLLKV-GRMEDAV 598
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M C P T+N +++ + E G+ + G L GL
Sbjct: 599 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 658
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG-------------- 254
C +G + A +LD + C PN TYS+++ GLC+ G V EA G
Sbjct: 659 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 718
Query: 255 ----------------------LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
LERM G D VTF+ILI+GL G+++ G++L
Sbjct: 719 VIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFC 778
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC-NQ 351
M +GC + +Y ++ K F A L+ M ++ + V++ +I LC N
Sbjct: 779 GMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGND 838
Query: 352 KLVEDVDW 359
++ E V +
Sbjct: 839 RIDEAVSY 846
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+N+++N L A + + A + G + ++ GLC + ++ +L+E
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ C PN TY+TL++ L +G +EAF LLERM + G + +TF ++I GL K+G++
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
E ++++ M +G P+ + +L+ L + R EA +++ +P V+Y +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ GL +E VL+ + + P
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSP 209
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 13/295 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ +I+ L +A R D + ++R+ + R D ++++ AGRI +
Sbjct: 717 PHVIAYSALIDGLCKAGRIDEAYEFLERMI--RAGRIPDVVTFSILINGLCDAGRIDTGL 774
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILL 205
E M C + +N ++N L GE Y ++ G+ + I++
Sbjct: 775 ELFCGMAERGCKADIYAYNAMINAYC---LKGEFSAAYALLEEMKTHGIAKNTVTHGIVI 831
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
K LC N ++ A P ++C + +Y+TL+ L E+A LL M ++G
Sbjct: 832 KALCGNDRIDEAVSYFHSIP-EDCRDEI-SYNTLITSLVASRRSEQALELLRAMVADGGS 889
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D + ++ GL K G E KLL+ M+ +G P+ +Y ++ GL K+ P A +
Sbjct: 890 PDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDY 949
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + + P + Y LI C V+D W K + G P + M+ +V
Sbjct: 950 FEEMLRKNLKPDAIVYSSLIDAFCKADKVDDA-W--KLLRSSGIEPTITMYSTMV 1001
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 8/280 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++N L R +++R+ C F +IK G I A
Sbjct: 69 PNAVTYNTLVNALLGQGRAKEAFSLLERMAANG-CPPELITFGLIIKGLCK-EGEIEAAF 126
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +M P V+ ++L+ L E + +G DA N ++ GL
Sbjct: 127 RVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGL 186
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G LEAA VL + P V T++ + GL + GN+ A+ + M G+ +T
Sbjct: 187 YKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNT 246
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ LI GL K GK++ + LL + K ++ +L+GL R EA +L+
Sbjct: 247 VTYDALIDGLCKAGKLDIALGLL---RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKA 303
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
M C P+ V + L++GLC + V++ + M + G
Sbjct: 304 MPC---VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESG 340
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 131/288 (45%), Gaps = 5/288 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
++P+ YT + + L ++ RFD +I+ + + Y+ I AGR+++
Sbjct: 644 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCA--PNAITYSSIVDGLCKAGRVTE 701
Query: 147 AIETLFDMPSYN-CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A+ M P V ++ +++ L A E + G D +IL+
Sbjct: 702 ALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILI 761
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC+ G ++ + ++ C+ ++ Y+ +++ C KG A+ LLE M++ GI
Sbjct: 762 NGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIA 821
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+TVT I+I L +++E + + + C + SY ++ L+ +R +A EL
Sbjct: 822 KNTVTHGIVIKALCGNDRIDEAVSYFHSIP-EDCR-DEISYNTLITSLVASRRSEQALEL 879
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ M+ + SP +Y ++ GL E +L++M +G P +
Sbjct: 880 LRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDL 927
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 35/138 (25%)
Query: 269 VTFNILISGLRKQGK-----------------------------------VEEGMKLLER 293
VT+N+LI+GL K G+ V++G KLLE
Sbjct: 2 VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M G+GC PN+ +Y ++ LL + R EA L+ RM P +++ +I GLC +
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121
Query: 354 VEDVDWVLKKMVQQGFVP 371
+E V+ +MV +GFVP
Sbjct: 122 IEAAFRVVDEMVDRGFVP 139
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 110/266 (41%), Gaps = 21/266 (7%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L+ S L + K N + ++I L R D E + + + CR D
Sbjct: 801 LKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRID--EAVSYFHSIPEDCR--D 856
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL-------VSAKLYG 180
YN + + R +A+E L M + P + V++ L V+AKL
Sbjct: 857 EISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQ 916
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E++ G D I++ GL + L A +E ++N +P+ YS+L+
Sbjct: 917 EMR-------SRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLI 969
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
C+ V++A+ LL S GI+ ++ ++ L K ++ ++++ MK K C
Sbjct: 970 DAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCE 1026
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELV 326
P + + + + R EA +LV
Sbjct: 1027 PGIHIWTSLATAYVAEGRVDEAVKLV 1052
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 94/213 (44%), Gaps = 19/213 (8%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVE----KLCRFS---DGFFYNVIKIYGNMAG 142
+E Y +I L ++R + ++++ + + C + DG F AG
Sbjct: 856 DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLF---------KAG 906
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
A + L +M S P ++T+ ++++ L AK + + ++ DA +
Sbjct: 907 SPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYS 966
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ C+ ++ A+ +L EP + YST++ LC+ ++A ++ M+S+
Sbjct: 967 SLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSK 1023
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
+ + L + +G+V+E +KL+ ++
Sbjct: 1024 NCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 108/220 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS F +L + K Y + + T G+ D LNIL+ C L AF V
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K C+P+ T++TL+ GLC +G + EA L ++ EG D VT+ L++GL K
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++LL M K C PN +Y ++ L ++ EA L MI + +SP +
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LIH LCN + V +L +MV +P + ++ +V
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 145/319 (45%), Gaps = 15/319 (4%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
F +LR SVL + K N TLI + K +A+ + I
Sbjct: 157 FCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI------- 209
Query: 125 FSDGFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+GF +V+ YG + G S AI L M NC P+V +N +++ L +
Sbjct: 210 -GEGFQPDVVT-YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ 267
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
E +++ G+ D N L+ LC + +L+E PNV +ST
Sbjct: 268 VTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 327
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++ LC++G + A +++ M G++ D VT+ L+ G + +++E +K+ + M KG
Sbjct: 328 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 387
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C PN SY ++ G +R +A L+ +M + + V+Y LIHGLC+ ++
Sbjct: 388 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 447
Query: 359 WVLKKMVQQGFVPRMGMWR 377
+ +MV G +P + +R
Sbjct: 448 ALFHEMVASGQIPDLVTYR 466
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ P V T N+++N + G + KLG + D N L++GLC G
Sbjct: 138 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 197
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A ++ D+ + +P+V TY TLM+GLC+ GN A LL M + + + +N
Sbjct: 198 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 257
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I L K +V E L M KG P+ +Y +++ L + + L+ M+ +
Sbjct: 258 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 317
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P+ V + ++ LC + ++ V+ M+++G P
Sbjct: 318 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 355
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 132/288 (45%), Gaps = 6/288 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAG 142
+K+ PN Y II+ L + ++ ++ + + + D F YN +I N+
Sbjct: 245 QKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGIS--PDIFTYNSLIHALCNLCE 302
Query: 143 RISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
K + TL +M + P+V F+ V++ L + + K GVE D
Sbjct: 303 W--KHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTY 360
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G C ++ A V D + C PNVR+Y+ L++G C+ +++A GLLE+M
Sbjct: 361 TALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL 420
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G+ ADTVT+N LI GL G+++ + L M G P+ +Y+ +L L E
Sbjct: 421 QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE 480
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A L+ + + + Y I G+C +E + + QGF
Sbjct: 481 AMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGF 528
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 4/286 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +T ++ +A+ K + + + +++ D + N++ R+ A
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSL--STQMDSFGIPPDVYTLNILINSFCHLRRLGYAF 167
Query: 149 ETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L + C P TFN L+ L V K+ GE ++ G + D L+ G
Sbjct: 168 SVLAKLLKLGCQPDNTTFNTLIRGLCVEGKI-GEALHLFDKTIGEGFQPDVVTYGTLMNG 226
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ GN AA +L ++NC PNV Y+T++ LC+ V EAF L M ++GI D
Sbjct: 227 LCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPD 286
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+N LI L + + LL M PN + V+ L + A ++V
Sbjct: 287 IFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVD 346
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
MI + P V+Y L+ G C + +++ V MV +G VP +
Sbjct: 347 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 39/179 (21%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
PN Y ++IN Q +R D +++++ ++ L +D YN + I+G GR+ A
Sbjct: 390 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGL--IADTVTYNTL-IHGLCHVGRLQHA 446
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
I +M + P + T+ ILL
Sbjct: 447 IALFHEMVASGQIPDLVTYR-----------------------------------ILLDY 471
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+N +L A +L N + ++ Y+ + G+C G +E A L + +G A
Sbjct: 472 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFAA 530
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 160/329 (48%), Gaps = 12/329 (3%)
Query: 61 VLKIFSNLRDPISVISVLNQY-SKRKDYNPNEALYTLIINKLAQAK--RFDAIEDIMQRI 117
+L++ + DP + ++ L+ S Y P + L ++ +LA + R + I+ R+
Sbjct: 17 LLELMKSEPDPATALAHLDLLVSTWPAYTPPQPLLFHLLRRLATSSPSRLPRLLGILPRL 76
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSA 176
+ RFS+ V+ + A A+ +PS+ C P V++ N +L+ V A
Sbjct: 77 RHRP--RFSESAALVVLSAFSR-ALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRA 133
Query: 177 KLYGEIQGIYTSAA--KLGVEI--DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
+ + + + S + G I + NI+L+ LC G+L+ A + D + P+
Sbjct: 134 RRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPD 193
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TYSTLM G + ++ A LL+ M S + D V +N L+ G + G+ E+ M++ E
Sbjct: 194 RITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWE 253
Query: 293 RM-KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
++ + G PN A+Y +L GL F EA ++ RM+ P ++Y +IHGLC
Sbjct: 254 QLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRS 313
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+ V +M++ G VP + ++ ++
Sbjct: 314 TDVDSAARVYSEMIKTGLVPDVVIYNSLL 342
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 142/310 (45%), Gaps = 32/310 (10%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI--------------KV 119
+ V Q + +PN A Y ++++ L + F D+ +R+ +
Sbjct: 248 AMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMI 307
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
LCR +D + A +M P V +N +L A
Sbjct: 308 HGLCRSTD----------------VDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRV 351
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC-EPNVRTYST 238
GE + S + G+ + NI+LKGL + G ++ A + + K + P++ T+ST
Sbjct: 352 GEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFST 410
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++HGLCEKG ++ +LE + G + D +++ +ISGL K G++++ +KL E++
Sbjct: 411 MIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDS 470
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
PNS Y ++ G +F +A + +M SP+ ++Y LIHGLC + +
Sbjct: 471 FKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEAS 530
Query: 359 WVLKKMVQQG 368
++M+++G
Sbjct: 531 RFTREMLEKG 540
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 3/244 (1%)
Query: 142 GRISKAIETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GR+ A++ L++ S + + P+ +N ++N A + + +Y+ A+
Sbjct: 454 GRLDDAVK-LYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTIT 512
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ GLC+ A E ++ C +V TY +L+ GLC ++ A L ++
Sbjct: 513 YNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQIL 572
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-GCYPNSASYQEVLYGLLDKKRF 319
+G+ D V NILI GL GKV+E +LL MK K C PN +Y ++ G + F
Sbjct: 573 DKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCF 632
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+A L ++ + P +SY I GLC+ + +L +M+ G +P W +
Sbjct: 633 DKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNIL 692
Query: 380 VGCV 383
V V
Sbjct: 693 VRAV 696
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 119/260 (45%), Gaps = 3/260 (1%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
+E Y+ +I+ L + R D + ++I ++ + YN + A + S AI
Sbjct: 439 DEFSYSSMISGLCKDGRLDDAVKLYEKISMDSF--KPNSHIYNALINGFCQASKFSDAIR 496
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
M +C P+ T+N +++ L A+ Y E + G +D L++GLC
Sbjct: 497 VYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLC 556
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ESEGIDADT 268
+ ++ A + ++ + + +V ++ L+HGLC G V+EA LL M E +
Sbjct: 557 RDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNV 616
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N L+ G + G ++ L + G P+ SY + GL R PE +L+
Sbjct: 617 VTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNE 676
Query: 329 MICERMSPSFVSYKKLIHGL 348
M+ + P+ +++ L+ +
Sbjct: 677 MLASGIIPTAITWNILVRAV 696
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 120/282 (42%), Gaps = 5/282 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ L D + ++ L D Y+ + R+ A+
Sbjct: 157 PNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLA--PDRITYSTLMSGFVKNNRLDNAL 214
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACCLNILLKG 207
L +MPSY P +N +L + + ++ + G + N++L G
Sbjct: 215 YLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDG 274
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G + A V + N +P++ TY T++HGLC +V+ A + M G+ D
Sbjct: 275 LCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPD 334
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V +N L+ G G+V E K + M G N SY +L GL D +A +L
Sbjct: 335 VVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWE 393
Query: 328 RM-ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ + +SP V++ +IHGLC + +L++ G
Sbjct: 394 LLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSG 435
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 132/299 (44%), Gaps = 15/299 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDA---IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
P+ Y+ +++ + R D + D M +V+ D YN + G
Sbjct: 192 PDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQP-----DAVCYNALLGGCFRNGEFE 246
Query: 146 KAI---ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
KA+ E L P + P++ T+N++L+ L ++ E ++ + D
Sbjct: 247 KAMRVWEQLVRDPGAS--PNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYG 304
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++ GLC + ++++A V E K P+V Y++L+ G C G V EA+ + M
Sbjct: 305 TMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVS 364
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGLLDKKRFPE 321
GI + ++NI++ GL G V++ L E + K P+ ++ +++GL +K +
Sbjct: 365 GI-RNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANK 423
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ +++ SY +I GLC ++D + +K+ F P ++ ++
Sbjct: 424 SLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALI 482
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 93/237 (39%), Gaps = 42/237 (17%)
Query: 87 YNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRI 144
+ PN +Y +IN QA +F DAI Q E C + YN + I+G A +
Sbjct: 471 FKPNSHIYNALINGFCQASKFSDAIRVYSQ--MAENDCSPTT-ITYNTL-IHGLCKAEKY 526
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A +M C V T+ ++ L K ++ G++ D NIL
Sbjct: 527 LEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNIL 586
Query: 205 LKGLCENGNLEAAFYVLDEFP-KQNCEPNVRTYSTLM----------------------- 240
+ GLC G ++ A +L E K NC PNV TY+TLM
Sbjct: 587 IHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENG 646
Query: 241 ------------HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
GLC E LL M + GI +T+NIL+ + K G ++
Sbjct: 647 LVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 141/319 (44%), Gaps = 37/319 (11%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ ++ +I + D + ++ ++ L DG Y ++ AG + +A
Sbjct: 296 TPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGL--MPDGVIYTMVIGGFCRAGLMLEA 353
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +M ++ C P V T+N +LN L + + + + + GV D C L+ G
Sbjct: 354 LRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHG 413
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL------------------------ 243
C +GN+E A D Q P++ TY+TL+ G+
Sbjct: 414 YCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPN 473
Query: 244 -----------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
CEKG V+ AF L+ M ++GI + +T+N +I G + G V +G + L
Sbjct: 474 HVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLP 533
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+M+ P+ +Y +++G + + + EA L+ M E + P V+Y +I G
Sbjct: 534 KMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHG 593
Query: 353 LVEDVDWVLKKMVQQGFVP 371
+++ DWV KKM +G P
Sbjct: 594 NMQEADWVYKKMGARGIEP 612
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 133/289 (46%), Gaps = 4/289 (1%)
Query: 94 YTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
YTL +++ + +F ++ ++ ++EK C F D +NV+ AG + A+ +
Sbjct: 160 YTLNIMVHSYCKTLQFGEVDTVIS--EMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
M S P + T+N VL L+ + + + ++ + GV D N+L+ G C
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G LE A E + P+V ++S L+ +G ++ A L M G+ D V +
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
++I G + G + E +++ + M GC P+ +Y +L GL ++R +A+EL+ M
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P ++ LIHG C +E + Q P + + ++
Sbjct: 398 RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLI 446
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 1/247 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A E L +M + P + +V+ A L E + G D
Sbjct: 313 GEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTY 372
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL GLC+ L A +L+E ++ P++ T++TL+HG C GN+E+A + +
Sbjct: 373 NTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISD 432
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + D VT+N LI G+ +QG + + +L + M + +PN +Y ++ +K +
Sbjct: 433 QRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDN 492
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV- 380
A + M+ + + P+ ++Y +I G C V L KM +P + + ++
Sbjct: 493 AFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIH 552
Query: 381 GCVTFGK 387
G V GK
Sbjct: 553 GYVKEGK 559
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 130/287 (45%), Gaps = 10/287 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK----VEKLCRFSDGFFYNVIKIYGNMAGRI 144
P+ Y ++N L + +R E+++ +K LC F+ +I Y G I
Sbjct: 367 PDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFT-----TLIHGYCR-DGNI 420
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA++ + P + T+N +++ + G+ ++ + + +IL
Sbjct: 421 EKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSIL 480
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ CE G ++ AF LDE + PN+ TY++++ G C GNV + L +M + +
Sbjct: 481 IDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV 540
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+N LI G K+GK+ E LL+ M+ + P++ +Y ++ G EA
Sbjct: 541 MPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADW 600
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +M + P +Y +I+G + + +M+Q+G P
Sbjct: 601 VYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 2/217 (0%)
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
S N + T N++++ +GE+ + + K V D N+++ G++E
Sbjct: 152 SSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVE 211
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
AA ++D + +P + TY++++ GL G ++A + M++ G+ D +FN+LI
Sbjct: 212 AAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLI 271
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK-RFPEAKELVGRMICERM 334
G + G++EE ++ + M+G+ P+ S+ L GL ++ A E + M +
Sbjct: 272 GGFCRAGELEEALRFYKEMRGRRVTPDVVSFS-CLIGLFTRRGEMDHAAEYLREMREFGL 330
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P V Y +I G C L+ + V +MV G +P
Sbjct: 331 MPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLP 367
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 88/187 (47%)
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E++ LNI++ C+ V+ E K+ P+V T++ ++ G+VE A
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMA 215
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L++ M S+GI VT+N ++ GL + G+ ++ ++ M G P+ S+ ++ G
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
EA M R++P VS+ LI + ++ L++M + G +P
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV 335
Query: 375 MWREIVG 381
++ ++G
Sbjct: 336 IYTMVIG 342
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%)
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
N E N T + ++H C+ E ++ ME + D VT N+++ + G VE
Sbjct: 154 NSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAA 213
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
M L++ M KG P +Y VL GLL R+ +A+E+ M ++P S+ LI G
Sbjct: 214 MALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGG 273
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
C +E+ K+M + P + + ++G T
Sbjct: 274 FCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFT 310
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ A L +M + P++ T+N ++ + + Q V D
Sbjct: 488 GQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITY 547
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G + G + AF +L +N +P+ TY+ ++ G GN++EA + ++M +
Sbjct: 548 NTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGA 607
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
GI+ D T+ +I+G G ++ +L + M KG P+
Sbjct: 608 RGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 87/183 (47%), Gaps = 10/183 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDA----IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
PN Y+++I+ + + D +++++ + V + ++ ++IK Y +G +
Sbjct: 472 PNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYN-----SIIKGYCR-SGNV 525
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
SK + L M P + T+N +++ V E + V+ DA N++
Sbjct: 526 SKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMI 585
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G +GN++ A +V + + EP+ TY ++++G GN +++F L + M +G+
Sbjct: 586 ISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGL 645
Query: 265 DAD 267
D
Sbjct: 646 APD 648
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 140/313 (44%), Gaps = 37/313 (11%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y +I +L A R D ++ + + + I+ Y AGR+ A++
Sbjct: 38 YRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYAR-AGRLRAAVDAFER 96
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + C P+ +N +++ LV+A + + +Y GV DA + LK C G
Sbjct: 97 MDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGR 156
Query: 214 LEAAFYVLDEFPKQNCE-----------------------------------PNVRTYST 238
A +L ++ C+ P+V T++
Sbjct: 157 PHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNN 216
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++H LC+KG+V E+ LL ++ G+ A+ T NI I GL + G++EE + L+ERM G
Sbjct: 217 VLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-GAY 275
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
P+ +Y ++ GL + EA + +GRM+ + P +Y +I G C ++++
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335
Query: 359 WVLKKMVQQGFVP 371
+LK V +GFVP
Sbjct: 336 ELLKDAVFKGFVP 348
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 122/256 (47%), Gaps = 15/256 (5%)
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
++ G YN ++ M GR + +P V TFN VL+ L E
Sbjct: 187 YAHGHGYNARHLFDEMLGR--------------DVFPDVATFNNVLHALCQKGDVMESGA 232
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ K G+ + NI ++GLCE+G LE A +++ P+V TY+TLM GLC
Sbjct: 233 LLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLC 291
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ V+EA L RM ++G D T+N +I G K G ++E +LL+ KG P+
Sbjct: 292 KDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRV 351
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ GL + A EL + + P V Y L+ GLC Q L+ V+ +M
Sbjct: 352 TYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM 411
Query: 365 VQQGFVPRMGMWREIV 380
V++G P + + I+
Sbjct: 412 VEEGCHPDIWTYNIII 427
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 119/245 (48%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F YN I +G + +A E L D P T+ ++N L + ++
Sbjct: 314 DDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELF 373
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
A ++ D N L+KGLC G + A V++E ++ C P++ TY+ +++GLC+
Sbjct: 374 NEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKM 433
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
GN+ +A ++ +G D TFN LI G K+ K++ ++L+ERM G P+ +Y
Sbjct: 434 GNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITY 493
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
VL GL + E E MI + P+ ++Y LI C +E+ V+ +M Q
Sbjct: 494 NSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQ 553
Query: 367 QGFVP 371
G VP
Sbjct: 554 DGLVP 558
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 122/240 (50%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G I +A+E + + + P + +N ++ L L + + G D
Sbjct: 364 GDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTY 423
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NI++ GLC+ GN+ A V+++ + P+V T++TL+ G C++ ++ A L+ERM +
Sbjct: 424 NIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWT 483
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
GI D +T+N +++GL K GK +E + E M KGC PN+ +Y ++ + E
Sbjct: 484 YGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 543
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A ++ RM + + P VS+ LIHG C ++ + +K+ ++G+ + ++G
Sbjct: 544 ASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIG 603
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 6/297 (2%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
++ KD P+ +Y ++ L + +M + VE+ C D + YN+I
Sbjct: 376 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM-VEEGCH-PDIWTYNIIINGLCKM 433
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G IS A + D P V TFN L+ KL +Q + G+ D
Sbjct: 434 GNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQ-LVERMWTYGIAPDVIT 492
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N +L GLC+ G + +E + C PN TY+ L+ C+ +EEA G++ RM
Sbjct: 493 YNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMC 552
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK-RF 319
+G+ D V+FN LI G + G ++ L +++ KG Y +A +L G K
Sbjct: 553 QDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKG-YSATADTFNILIGAYSSKLNM 611
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
A+++ G MI + P +Y+ L+ GLC V+ L +M+ +GFVP M +
Sbjct: 612 QMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATF 668
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 115/229 (50%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A + L M + C P T+N +++ + + E + A G D
Sbjct: 295 KVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYC 354
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC G++E A + +E ++ +P++ Y++L+ GLC +G + A ++ M E
Sbjct: 355 SLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEE 414
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D T+NI+I+GL K G + + ++ KG P+ ++ ++ G + + A
Sbjct: 415 GCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSA 474
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+LV RM ++P ++Y +++GLC ++V+ ++M+ +G P
Sbjct: 475 LQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRP 523
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 130/286 (45%), Gaps = 2/286 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y +IIN L + +M V+ D F +N + ++ A
Sbjct: 417 HPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGY--LPDVFTFNTLIDGYCKRLKLDSA 474
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ + M +Y P V T+N VLN L A E+ + G +A NIL++
Sbjct: 475 LQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIEN 534
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ LE A V+ + P+ +++TL+HG C G+++ A+ L ++++ +G A
Sbjct: 535 FCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSAT 594
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TFNILI + ++ K+ M KG P+ +Y+ ++ GL A +
Sbjct: 595 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLA 654
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
MI + PS ++ ++++ L V + ++ MV+ G VP +
Sbjct: 655 EMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEV 700
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 117/268 (43%), Gaps = 2/268 (0%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
IS +V+ + K Y P+ + +I+ + + D+ +++R+ + D Y
Sbjct: 436 ISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIA--PDVITY 493
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + AG+ + ET +M C P+ T+N+++ E G+ +
Sbjct: 494 NSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQ 553
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ DA N L+ G C NG+L+ A+ + + ++ T++ L+ K N++
Sbjct: 554 DGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQM 613
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A + M S+G D T+ IL+ GL K V+ L M KG P+ A++ +L
Sbjct: 614 AEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLN 673
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFV 339
L R EA ++ M+ + P V
Sbjct: 674 LLAMNHRVSEAVAIIHIMVRMGVVPEVV 701
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 168/367 (45%), Gaps = 43/367 (11%)
Query: 50 LNHKDWLSPTEVLKIFSNLRDPISVISVL-NQYSKRKDYNPNEALYTLIINKLAQAKRFD 108
+N +SP + + DP + + N K + Y LII KL +++ F
Sbjct: 1 MNPPKPISPFRLSSLLRLQNDPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFH 60
Query: 109 AIEDIMQRIKVEKLCRFS--DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF 166
+E I+ +++ E RFS + F NVI YG A +AI+T +P + C +VK+
Sbjct: 61 EMEQILSQLRRET--RFSPKEIIFCNVISFYGR-ARLPDRAIQTFESIPEFRCQRTVKSL 117
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
N +LN L+ K + + GI + K D C N+L+ C +G+L A+ V DE +
Sbjct: 118 NSLLNALLKCKEFEKFDGILSGIDKFATP-DVCTYNVLINACCSSGSLGDAWNVFDEMLR 176
Query: 227 Q------------------------------------NCEPNVRTYSTLMHGLCEKGNVE 250
+ N +PN Y++LM GLC +
Sbjct: 177 KHVCPNVVTFGTLISGLCGDSRLDEAFRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELS 236
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
AF L + M + + D+ ++ LI+ L K G+ +E +LE M+ GC P++ +Y ++
Sbjct: 237 LAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMI 296
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
G ++K F A ++ M+ + P +SY +I GLC + + + + + M ++G
Sbjct: 297 SGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCT 356
Query: 371 PRMGMWR 377
P +G +R
Sbjct: 357 PDVGSYR 363
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 19/288 (6%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y ++IN + ++ + + +C F + + G+ R+ +A
Sbjct: 145 TPDVCTYNVLINACCSSGSLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCGD--SRLDEA 202
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI--YTSAAKLGVE-------IDA 198
DM VK FN+ N V A L + + + A +L E +D+
Sbjct: 203 FRLKEDM--------VKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDS 254
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+ L+ L + G + F VL+E + C+P+ TY+ ++ G C + + E A+G+LE
Sbjct: 255 GIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEE 314
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M ++G D +++N++ISGL K+GK E L E M +GC P+ SY+ + GL + +
Sbjct: 315 MVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQ 374
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
F EA ++ M+ + +P S K + LC + +E + VL +V+
Sbjct: 375 FNEAAFILDEMVFKGYAPKSASKTKFVEALCQEGNLELLCKVLNSLVK 422
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 2/140 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +I+ K F+A +++ + V K C+ D YNVI G+ +A
Sbjct: 287 PDTVTYNAMISGFCNEKDFEAAYGVLEEM-VAKGCK-PDVISYNVIISGLCKEGKWREAN 344
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ DMP C P V ++ ++ + L + E I G + ++ L
Sbjct: 345 DLFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEAL 404
Query: 209 CENGNLEAAFYVLDEFPKQN 228
C+ GNLE VL+ K N
Sbjct: 405 CQEGNLELLCKVLNSLVKGN 424
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K P+E +Y II L + E +++ ++ K F D Y + G
Sbjct: 304 KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMR--KWGVFPDNVVYTTVISGFCKLG 361
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+S A + +M P + T+ V++ + + E + ++ G+E D
Sbjct: 362 NVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYT 421
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G ++ AF V ++ ++ PNV TY+ L GLC+ G ++ A LL M +
Sbjct: 422 ALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRK 481
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + T+N +++GL K G +E+ +KL+E M G YP++ +Y ++ +A
Sbjct: 482 GLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKA 541
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EL+ M+ +R+ P+ V++ L++G C ++ED + +++ M+++G +P
Sbjct: 542 HELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMP 590
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 142/317 (44%), Gaps = 39/317 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P+ +YT +I+ + A + ++ +K+ D Y + I+G +G++ +A
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIV--PDIVTYTSV-IHGICKSGKMVEA 401
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E +M P T+ +++ A E ++ + G+ + L G
Sbjct: 402 REMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADG 461
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+NG ++ A +L E ++ +PNV TY+T+++GLC+ GN+E+ L+E M+ G D
Sbjct: 462 LCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPD 521
Query: 268 T-----------------------------------VTFNILISGLRKQGKVEEGMKLLE 292
T VTFN+L++G G +E+G +L+E
Sbjct: 522 TITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIE 581
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M KG PN+ ++ ++ K E+ M + P +Y LI G C +
Sbjct: 582 WMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKAR 641
Query: 353 LVEDVDWVLKKMVQQGF 369
+++ ++ K+MV++G+
Sbjct: 642 NMKEAWFLHKEMVEKGY 658
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 2/231 (0%)
Query: 144 ISKAIETLFDMPSYN-CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
I A++ + P CW +V N+VL+ L E + G D
Sbjct: 223 IKIAVKVFEEFPELGVCWNTVSC-NIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYG 281
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+++ G C G L+ ++DE + +P+ Y+ ++ LC+ G V EA LL M
Sbjct: 282 VVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKW 341
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D V + +ISG K G V KL + M+ K P+ +Y V++G+ + EA
Sbjct: 342 GVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEA 401
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+E+ M+ + + P V+Y LI G C +++ V +MVQ+G P +
Sbjct: 402 REMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNV 452
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G++ D N ++ LC+NG + A +L K P+ Y+T++ G C+ GNV A
Sbjct: 307 GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAA 366
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L + M + I D VT+ +I G+ K GK+ E ++ M KG P+ +Y ++ G
Sbjct: 367 CKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDG 426
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
EA + +M+ + ++P+ V+Y L GLC ++ + +L +M ++G P
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPN 486
Query: 373 MGMWREIV 380
+ + IV
Sbjct: 487 VYTYNTIV 494
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 117/287 (40%), Gaps = 51/287 (17%)
Query: 85 KDYNPNEALYTLIINKLAQA----KRFDAIEDIMQR---IKVEKLCRFSDGFFYNVIKIY 137
K P+E YT +I+ +A + F ++Q+ V +DG N
Sbjct: 411 KGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN----- 465
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-------SAKLYGE--IQGIYTS 188
G I A E L +M P+V T+N ++N L + KL E + G Y
Sbjct: 466 ----GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPD 521
Query: 189 AAKLGVEIDACC--------------------------LNILLKGLCENGNLEAAFYVLD 222
+DA C N+L+ G C +G LE +++
Sbjct: 522 TITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIE 581
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
++ PN T+++LM C K N+ + + M G+ D+ T+NILI G K
Sbjct: 582 WMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKAR 641
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
++E L + M KG +A+Y ++ G +K+F EA++L M
Sbjct: 642 NMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEM 688
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 2/227 (0%)
Query: 156 SYNCWPSVK-TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL-CENGN 213
+Y W S F+L +LV E Q ++ + GV + N+ L L C
Sbjct: 163 TYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEG 222
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A V +EFP+ N + + ++H LC+ G V EA LL +M G D V++ +
Sbjct: 223 IKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGV 282
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
++SG + G++++ +KL++ +KGKG P+ Y ++ L EA++L+ M
Sbjct: 283 VVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWG 342
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P V Y +I G C V + +M ++ VP + + ++
Sbjct: 343 VFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVI 389
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 101/254 (39%), Gaps = 37/254 (14%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
I V + L RK PN Y I+N L + + +M+ + + + D Y
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGF--YPDTITY 525
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-------------------- 171
+ G ++KA E L M + P++ TFN+++N
Sbjct: 526 TTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLE 585
Query: 172 --LLVSAKLYGEIQG-------------IYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
++ +A + + IY + GV D+ NIL+KG C+ N++
Sbjct: 586 KGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKE 645
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A+++ E ++ TY L+ G ++ EA L E M G+ A+ ++I +
Sbjct: 646 AWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVD 705
Query: 277 GLRKQGKVEEGMKL 290
++G E ++L
Sbjct: 706 VNYEEGNWEITLEL 719
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 123/230 (53%), Gaps = 1/230 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
++ +A+E M P V T++ +++ L + K+ ++ ++ + G +
Sbjct: 93 KMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAY 152
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC++ N+E A+ +L+E + P+ TY+T++ GLC G V EA + M S
Sbjct: 153 NALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPS 212
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D V +N L+ L K+GK +E MKL + + KG P++ +Y +L GL K E
Sbjct: 213 RGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 272
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A+E+ +M+ +P+ +Y ++ G C K V+D VL++M + G VP
Sbjct: 273 AEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVP 322
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 126/282 (44%), Gaps = 2/282 (0%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N Y +IN L + + + +++ + + D YN I G++S+A +
Sbjct: 148 NTVAYNALINGLCKDENIERAYKLLEEMASKGY--VPDNITYNTILSGLCRMGKVSEAKQ 205
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
MPS P V +N +L+ L E ++ G D N +L GL
Sbjct: 206 FFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLA 265
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
N++ A + + C PN TYS ++ G C V++A +LE M G D V
Sbjct: 266 RKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVV 325
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+NIL+ GL K V++ +L M GC P+ SY VL GL + +A+ L RM
Sbjct: 326 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 385
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I ++ P V++ L+ GLC +++ +L +M G P
Sbjct: 386 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAP 427
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 142 GRISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++++A+E LF M C + +N ++N L + + A G D
Sbjct: 127 GKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNIT 186
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N +L GLC G + A D P + P+V Y+ L+ L ++G +EA L + +
Sbjct: 187 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI 246
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++G DTVT+N ++ GL ++ ++E ++ ++M GC PN A+Y VL G K+
Sbjct: 247 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVD 306
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A +++ M P V+Y L+ GLC LV+ + MV G P
Sbjct: 307 DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 357
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 2/245 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ Y+P+ Y +++ L + + D + + + + D YN I + +
Sbjct: 213 RGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGY--MPDTVTYNSILLGLARKSNM 270
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A E M + C P+ T+++VL+ AK + + +K+G D NIL
Sbjct: 271 DEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNIL 330
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GLC+ ++ A + C P++ +YS +++GLC+ V +A L +RM +
Sbjct: 331 LDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 390
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VTFNIL+ GL K GK++E LL++M GC P+ +Y ++ GL + R +A
Sbjct: 391 VPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADR 450
Query: 325 LVGRM 329
L M
Sbjct: 451 LTQAM 455
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 12/291 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM---- 140
K Y P+ Y I++ L + + + + S G+ +V+ G +
Sbjct: 178 KGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMP-------SRGYSPDVVAYNGLLDALY 230
Query: 141 -AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G+ +A++ D+ + P T+N +L L E + ++ G +
Sbjct: 231 KEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGA 290
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+I+L G C ++ A VL+E K P+V TY+ L+ GLC+ V++A L M
Sbjct: 291 TYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G D V+++++++GL K KV + L +RM + P+ ++ ++ GL +
Sbjct: 351 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 410
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
EAK+L+ +M C +P +V+Y L++GL Q D + + M ++GF+
Sbjct: 411 DEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 461
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C P+ TF +VL + ++ G+ D NIL+ G + G ++ A
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ +E EP++ TY++L++ C++ ++EA L + M +G + D VT++ +ISGL
Sbjct: 64 RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123
Query: 279 RKQGKVEEGMKLL-ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
K GKV E +++L +M +GC N+ +Y ++ GL + A +L+ M + P
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++Y ++ GLC V + M +G+ P
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSP 217
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+ C PN T+ ++ C++G + + + L E+M GI D + +NILI G K+G+V+E
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+L E M G P+ +Y +L + + EA EL M + P V+Y +I
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 347 GLCNQ-KLVEDVDWVLKKMVQQG 368
GLC K+ E ++ + KM+++G
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERG 144
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 2/179 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN A Y+++++ +AK+ D +++ + K+ D YN++ + KA
Sbjct: 287 PNGATYSIVLSGHCRAKKVDDAHKVLEEM--SKIGAVPDVVTYNILLDGLCKTNLVDKAH 344
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M C P + ++++VLN L + + ++ + + D NIL+ GL
Sbjct: 345 ELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 404
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G L+ A +LD+ C P+ Y+TLM+GL ++G +A L + M+ +G +D
Sbjct: 405 CKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
TF +++ KQGK+ +G KL E+M G P+ Y ++ G K R EA L M
Sbjct: 10 TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKD 388
+ + PS +Y L++ C + +++ + K M ++GF P + + I+ G GK
Sbjct: 70 VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK- 128
Query: 389 NRNRVYVTETVDSL 402
VTE ++ L
Sbjct: 129 ------VTEALEML 136
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 7/322 (2%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + + ++ FS+L+ SV ++ K P+ + +IN L + +F +
Sbjct: 129 DIYTLSILIDCFSHLQRVDLAFSVFSKMIKL-GLQPDAVTFNTLINGLCKVGKFAQAVEF 187
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMA--GRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+ C+ + Y I + G + A M C P+V T+N++++
Sbjct: 188 FDDFEASG-CQPT---VYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILID 243
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L KL E I++ + D N L++GLC + A +L+E N P
Sbjct: 244 SLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMP 303
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N+ T++ L+ +C++G V EA G+ + M G++ D VT++ L+ G + ++ E KL
Sbjct: 304 NIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLF 363
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ M KGC P++ SY ++ G KR EAK+L MI + ++P V+Y LIHGLC
Sbjct: 364 DAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQL 423
Query: 352 KLVEDVDWVLKKMVQQGFVPRM 373
+ + + K M G +P +
Sbjct: 424 GRLREAQDLFKNMHSNGNLPDL 445
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 111/220 (50%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + T +++++ + +++ KLG++ DA N L+ GLC+ G A
Sbjct: 128 PDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEF 187
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+F C+P V TY+T+++GLC+ G A GL ++ME G + VT+NILI L K
Sbjct: 188 FDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCK 247
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
V E + + MK K P+ +Y ++ GL + +R+ EA L+ M + P+ +
Sbjct: 248 DKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFT 307
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ L+ +C + V + V K M + G P + + ++
Sbjct: 308 FNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLM 347
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 138/293 (47%), Gaps = 4/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
PN Y ++I+ L + K + DI +K +++ D F YN +I+ N R +A
Sbjct: 233 PNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRIS--PDIFTYNSLIQGLCNFR-RWKEA 289
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L +M S N P++ TFN++++ + E QG++ + ++GVE D + L+ G
Sbjct: 290 SALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYG 349
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ A + D + C+P+ +Y+ L+ G C+ ++EA L M +G+ D
Sbjct: 350 YSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPD 409
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V +N LI GL + G++ E L + M G P+ +Y +L G + +A L
Sbjct: 410 NVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFR 469
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + P Y LI +C ++D + ++ QG +P + ++ I+
Sbjct: 470 VMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTII 522
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS-AKLYGEIQGIYTSAAKLGVEIDACCLN 202
I A+ + M P + F +L+ +V + YG + + G+ D L+
Sbjct: 75 IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ ++ AF V + K +P+ T++TL++GLC+ G +A + E+
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G T+ +I+GL K G+ L ++M+ GC PN +Y ++ L K EA
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
++ M +R+SP +Y LI GLCN + ++ +L +M +P + + +V
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314
Query: 383 V 383
+
Sbjct: 315 I 315
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 1/225 (0%)
Query: 151 LFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
LFD M + C P ++N+++ AK E + ++ G+ D N L+ GLC
Sbjct: 362 LFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLC 421
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G L A + P++ TYS L+ G C++G + +AF L M+S + D
Sbjct: 422 QLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIA 481
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+NILI + K G +++ KL + +G PN Y ++ L + EA E M
Sbjct: 482 MYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNM 541
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ P SY +I G K ++ +M +GFV G
Sbjct: 542 EGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAG 586
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 4/215 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K P+ Y ++I +AKR D + + + + L D YN + I+G GR
Sbjct: 369 KGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLT--PDNVNYNTL-IHGLCQLGR 425
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A + +M S P + T++++L+ G+ ++ ++ D NI
Sbjct: 426 LREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNI 485
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ +C+ GNL+ A + E Q PNV+ Y+T+++ LC++G ++EA ME +G
Sbjct: 486 LIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDG 545
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
D ++N++I G + +L+ M+ +G
Sbjct: 546 CPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/183 (18%), Positives = 71/183 (38%), Gaps = 2/183 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y +I+ L Q R +D+ + + D F Y+++ G + KA
Sbjct: 407 TPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG--NLPDLFTYSMLLDGFCKEGYLGKA 464
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
M S P + +N++++ + + + +++ G+ + ++
Sbjct: 465 FRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINN 524
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G L+ A C P+ +Y+ ++ G + + A L+ M G A+
Sbjct: 525 LCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAE 584
Query: 268 TVT 270
T
Sbjct: 585 AGT 587
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 150/290 (51%), Gaps = 5/290 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +I L ++ ++ + +K K C D F YN++ G++ +A+
Sbjct: 404 PDVCTYNSLIQGLCLSRNHTVAMELYKEMKT-KGCH-PDEFTYNMLIDSLCFRGKLQEAL 461
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +M C +V T+N +++ K E + I+ GV ++ N L+ GL
Sbjct: 462 NLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGL 521
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++ +E A ++D+ + P+ TY++L+ C+ G++++A +++ M S+G + D
Sbjct: 522 CKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDI 581
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ LI+GL K G+VE KLL ++ KG +Y V+ L +KR EA L
Sbjct: 582 VTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFRE 641
Query: 329 MICERMSPSFVSYKKLIHGLCN--QKLVEDVDWVLKKMVQQGFVPRMGMW 376
MI + +P V+YK + GLC + E VD+V+ +M+++G+VP +
Sbjct: 642 MIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVM-EMLERGYVPEFSSF 690
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 171/337 (50%), Gaps = 6/337 (1%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+PT++L D +VI + SK+ ++ P+ +++ +++KL +A FDA++DI++
Sbjct: 54 FTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILK 113
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP-SYNCWPSVKTFNLVLNLLV 174
+K+ L + I+ Y + G ++ ++ + M + + +N +LN+LV
Sbjct: 114 EMKI-SLSVIDNDSLLVFIESYASF-GLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLV 171
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
++ +++ G+ D NIL+K LC + A +++E P+ +
Sbjct: 172 DGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEK 231
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T++T+M G E+GN++ A + E+M G VT N+L++G K+G++EE ++ +E M
Sbjct: 232 TFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEM 291
Query: 295 KGK-GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+ G +P+ ++ ++ GL A E++ M+ E P +Y LI GLC
Sbjct: 292 SLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGE 351
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
V++ VL +M+++ P + I+ T K+N+
Sbjct: 352 VDEAVKVLNQMIERDCSPNTVTYNTIIS--TLCKENQ 386
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 145/304 (47%), Gaps = 2/304 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
+ + S R+ + P++ + +++N L++ ++M + E D + YN +
Sbjct: 288 IEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD--PDIYTYNSLISG 345
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
G + +A++ L M +C P+ T+N +++ L E + G+ D
Sbjct: 346 LCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPD 405
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
C N L++GLC + N A + E + C P+ TY+ L+ LC +G ++EA LL+
Sbjct: 406 VCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLK 465
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
ME G + +T+N LI G K ++ E ++ ++M+ +G NS +Y ++ GL +
Sbjct: 466 EMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSE 525
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
R EA +L+ +MI E + P +Y L+ C ++ +++ M G P + +
Sbjct: 526 RVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYG 585
Query: 378 EIVG 381
++
Sbjct: 586 TLIA 589
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 36/266 (13%)
Query: 142 GRISKAIETLFDMP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GRI +A+ + +M +P TFN+++N L + + G + D
Sbjct: 279 GRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYT 338
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA-------- 252
N L+ GLC+ G ++ A VL++ +++C PN TY+T++ LC++ VEEA
Sbjct: 339 YNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLT 398
Query: 253 ---------------------------FGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
L + M+++G D T+N+LI L +GK++
Sbjct: 399 GKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQ 458
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
E + LL+ M+ GC N +Y ++ G KR EA+E+ +M + +S + V+Y LI
Sbjct: 459 EALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLI 518
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVP 371
GLC + VE+ ++ +M+ +G P
Sbjct: 519 DGLCKSERVEEASQLMDQMIMEGLRP 544
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 163/334 (48%), Gaps = 20/334 (5%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI- 117
T VL+ LRD + N +++ Y E Y ++ L + + + + + I
Sbjct: 80 TTVLQTLGFLRDTSKALQFFN-WAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIE 138
Query: 118 -KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-- 174
+ + + FF ++++ + N AG ++I+ M S+ PSV TFN +L +L+
Sbjct: 139 KRSRGIVKLEARFFNSLMRNF-NRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKR 197
Query: 175 -----SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
+ K+Y E+ Y GV D NIL++G C NG ++ F + ++ + C
Sbjct: 198 GRTNMAKKVYDEMLSTY------GVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGC 251
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID--ADTVTFNILISGLRKQGKVEEG 287
EP+V TY+TL+ GLC G V A+ +++ M + +D + VT+ LI G + ++E+
Sbjct: 252 EPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKA 311
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV-GRMICERMSPSFVSYKKLIH 346
+ + E M +G N+ +Y ++ GL + ++F + K+++ G SP ++ L+H
Sbjct: 312 LAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMH 371
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C+ ++D V ++M + P + +V
Sbjct: 372 CHCHAGNLDDALKVFERMSELKIQPDSATYSALV 405
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 21/254 (8%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF------YNVIKIYGNMAGR 143
N Y +I L +A++F+ I+DI++ DG F +N + AG
Sbjct: 326 NNITYNTLIKGLCEARKFEKIKDILEGTA-------GDGTFSPDTCTFNTLMHCHCHAGN 378
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS--AAKLGVEIDAC-- 199
+ A++ M P T++ ++ L Y + + + K+ + D C
Sbjct: 379 LDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKP 438
Query: 200 ---CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
N + K LCE G + A + ++ + + +Y TL+ G C++G E + LL
Sbjct: 439 LVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELL 497
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M + D T+ LI+GL K ++ LE+M PNS+++ +L LL++
Sbjct: 498 VLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQ 557
Query: 317 KRFPEAKELVGRMI 330
R E+ L+ M+
Sbjct: 558 GRASESASLIQLML 571
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 123/309 (39%), Gaps = 47/309 (15%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
NL D + V +++ P+ A Y+ ++ L Q ++ ED++ ++ K+
Sbjct: 378 NLDDALKVFERMSELK----IQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSG 433
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
DG C P V +N + L + + +
Sbjct: 434 DG------------------------------CKPLVAAYNPIFKYLCETGKTKKAEKAF 463
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G + D L+ G C+ G E+ + +L +++ P+ TY +L++GL
Sbjct: 464 RQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHM 522
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN---S 303
A LE+M ++ TF+ +++ L +QG+ E L++ M K N S
Sbjct: 523 DKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFS 582
Query: 304 ASYQEVLYGL-LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVL 361
+L+G ++ K F L G+ +M ++LI LC+ +K+++ +L
Sbjct: 583 TGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKM-------EELIRYLCHCRKVIQGSKLLL 635
Query: 362 KKMVQQGFV 370
+ FV
Sbjct: 636 FSLESHQFV 644
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 156/306 (50%), Gaps = 20/306 (6%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+S T VL+ ++DP + +++++K ++ Y +++ L + + + + +
Sbjct: 76 ISKTTVLRTLRLIKDPSKALRFF-KWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLF 134
Query: 116 RIK--VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
I+ + + D FF ++I+ Y AG ++++ M S PSV TFN ++++L
Sbjct: 135 SIEKHSKGTVKLEDRFFNSLIRSYAE-AGLFKESMKLFQTMKSIAVSPSVVTFNSLMSIL 193
Query: 174 V-------SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
+ + ++Y E+ G Y GV D C N+L++G C+N ++ F E
Sbjct: 194 LKRGRTNMAKEVYDEMLGTY------GVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMES 247
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM--ESEGIDADTVTFNILISGLRKQGKV 284
NC+ +V TY+TL+ GLC G V A L+ M + EG++ + VT+ LI G + +V
Sbjct: 248 FNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEV 307
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE-RMSPSFVSYKK 343
EE + +LE M +G PN +Y ++ GL + + + K+++ RM + SP ++
Sbjct: 308 EEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNT 367
Query: 344 LIHGLC 349
+IH C
Sbjct: 368 IIHLHC 373
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 136/328 (41%), Gaps = 46/328 (14%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ VL + + R PN Y ++ L +A + D ++D+++R+K SDG F
Sbjct: 310 ALVVLEEMTSR-GLKPNMITYNTLVKGLCEAHKLDKMKDVLERMK-------SDGGF--- 358
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
P TFN +++L A E ++ S K
Sbjct: 359 --------------------------SPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFR 392
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEF-------PKQNCEPNVRTYSTLMHGLCEK 246
+ D+ + L++ LC+ G+ + A + DE K +P +Y+ + LCE
Sbjct: 393 IPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEH 452
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G ++A ++ ++ G D ++ +I G K+G E G +LL M + P+ Y
Sbjct: 453 GKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIY 511
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ G L K + AKE + +M+ P ++ ++ L + + V+ M++
Sbjct: 512 DYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHESSCVIVMMLE 571
Query: 367 QGFVPRMGMWREIVGCVTFGKDNRNRVY 394
+ + + E + + FG++ R +
Sbjct: 572 KNVRQNINLSTESLQ-LLFGREQHERAF 598
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 122/270 (45%), Gaps = 23/270 (8%)
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
V+ LCR ++I N+ + K E L P+V T+ ++ +
Sbjct: 261 VDGLCRAGK------VRIARNLVNGMGKKCEGL--------NPNVVTYTTLIRGYCMKQE 306
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN-CEPNVRTYS 237
E + G++ + N L+KGLCE L+ VL+ P+ T++
Sbjct: 307 VEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFN 366
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
T++H C GN++EA + E M+ I AD+ +++ LI L ++G + +L + + K
Sbjct: 367 TIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEK 426
Query: 298 -------GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
G P +ASY + L + + +A+ ++ R + +R + SY +I G C
Sbjct: 427 EILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVI-RQLMKRGTQDPQSYTTVIMGHCK 485
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ E +L M+++ F+P + ++ ++
Sbjct: 486 EGAYESGYELLMWMLRRDFLPDIEIYDYLI 515
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 149/327 (45%), Gaps = 38/327 (11%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
+K+++Y + + Y +I+ L +++ + ++Q + +C + VI++ GN A
Sbjct: 114 AKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGN-A 172
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-VEIDACC 200
I KAI + + + C P+ + +N ++ +L+ Y ++ +Y + G + D
Sbjct: 173 KMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVT 232
Query: 201 LNILLKGLC----------------ENG-------------------NLEAAFYVLDEFP 225
+ L+ C ENG N+ A + +E
Sbjct: 233 YSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMR 292
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
C P+V TY+ L+ GL + G ++EA+ M+ EG DTV N +I+ L K G+++
Sbjct: 293 YMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLD 352
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLD-KKRFPEAKELVGRMICERMSPSFVSYKKL 344
+G+KL E M C PN +Y ++ L + K R E RM +SPS +Y L
Sbjct: 353 DGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSIL 412
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I G C +E +L++M ++GF P
Sbjct: 413 IDGFCKTNRIEKAMMLLEEMDEKGFPP 439
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 155/365 (42%), Gaps = 39/365 (10%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
V + N+ S P+ Y+ +I+ + R D+ ++ +K E + + + +
Sbjct: 213 VHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMK-ENGMQPTAKIYTMI 271
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
I ++ + + A+ +M C P V T+ ++ L A E Y + G
Sbjct: 272 ISLFFKL-DNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREG 330
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE-KGNVEEA 252
+ D +N ++ L + G L+ + +E +C PNV TY+T++ L E K V E
Sbjct: 331 CKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEV 390
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
F ERM+ GI T++ILI G K ++E+ M LLE M KG P A+Y ++
Sbjct: 391 FSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDA 450
Query: 313 LLDKKRFPEAKEL-------------------------VGRM-----ICERMS-----PS 337
L KR+ A EL GR+ + + MS P+
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPN 510
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVT 396
+Y L+ GL ++++ ++KM + G +P + + I+ G G +R +T
Sbjct: 511 VYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLT 570
Query: 397 ETVDS 401
+S
Sbjct: 571 NMKNS 575
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 134/317 (42%), Gaps = 38/317 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +I L +A R D ++ E C+ N+I G AGR+ +
Sbjct: 298 PDVFTYTELIRGLGKAGRIDEAYHFYHEMQREG-CKPDTVVMNNMINFLGK-AGRLDDGL 355
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAK-LYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +M +C P+V T+N ++ L +K E+ + G+ +IL+ G
Sbjct: 356 KLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDG 415
Query: 208 LCENGNLEAAFYVLDE-----FP-----------------------------KQNC-EPN 232
C+ +E A +L+E FP K+NC +
Sbjct: 416 FCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS 475
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
R Y+ ++ L + G +++A L + M G + +N L+SGL + ++E + +
Sbjct: 476 ARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMR 535
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+M+ GC P+ SY +L GL A E++ M + P VSY ++ L +
Sbjct: 536 KMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAG 595
Query: 353 LVEDVDWVLKKMVQQGF 369
+ E+ ++K+M GF
Sbjct: 596 MFEEAAELMKEMNALGF 612
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 3/261 (1%)
Query: 89 PNEALYTLIINKLAQAK-RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN Y II L ++K R + +R+K + F Y+++ RI KA
Sbjct: 368 PNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGIS--PSPFTYSILIDGFCKTNRIEKA 425
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L +M P + +++ L AK Y ++ + A +++K
Sbjct: 426 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKH 485
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L + G L+ A + DE K C PNV Y+ LM GL ++EA + +M+ G D
Sbjct: 486 LGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPD 545
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++NI+++GL K G M++L MK P++ SY VL L F EA EL+
Sbjct: 546 INSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMK 605
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M ++Y ++ +
Sbjct: 606 EMNALGFEYDLITYSSILEAI 626
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 5/202 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P A Y +I+ L +AKR+D ++ Q +K + C S Y V+ + AGR+
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELK--ENCGSSSARVYAVMIKHLGKAGRL 492
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
AI +M C P+V +N +++ L A + E + G D NI+
Sbjct: 493 DDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNII 552
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GL + G A +L +P+ +Y+T++ L G EEA L++ M + G
Sbjct: 553 LNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGF 612
Query: 265 DADTVTFNILISGLRKQGKVEE 286
+ D +T++ ++ + GKV++
Sbjct: 613 EYDLITYSSILEAI---GKVDQ 631
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 134/283 (47%), Gaps = 2/283 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P++ Y +N L Q +M + E D F YN++ G++ +
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG--HDPDVFTYNIVVNCLCKNGQLEE 339
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M C P + TFN ++ L + E + GV D NIL+
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G+ A + +E C P+ TY+TL+ LC G + +A LL+ MES G
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
T+T+N +I GL K+ ++EE ++ ++M +G N+ ++ ++ GL K+ +A L+
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLI 519
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+MI E + P+ ++Y ++ C Q ++ +L+ M GF
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 133/251 (52%), Gaps = 4/251 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA++ L DM S C S T+N +++ L E + ++ G+ +A
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC++ ++ AF ++++ + +PN TY++++ C++G++++A +LE M +
Sbjct: 500 NTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + D VT+ LI+GL K G+ + +K+L M+ KG P +Y VL L + +
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 619
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC--NQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A L M P ++YK + GLC + E D++L +MV +GF+P +R +
Sbjct: 620 ALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML-EMVDKGFIPEFSSFRML 678
Query: 380 V-GCVTFGKDN 389
G + G D+
Sbjct: 679 AEGLLNLGMDD 689
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 148/319 (46%), Gaps = 4/319 (1%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
DP + + +LN R D+ P +Y II KL D ++ ++ ++ E + G
Sbjct: 53 DPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREG-HQVKLGV 111
Query: 130 FYNVIKIYGNMAGRISKAIETLFDM--PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
++ + Y A++ + + P + +N +LN+LV ++ +Y+
Sbjct: 112 VHSFLDSYEGQQ-LFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
G++ D N L+K LC + A +L+E + P+ T++TLM G E+G
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEG 230
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++E A + RM G A VT N+LI+G K G+VE+ + +++ G P+ +Y
Sbjct: 231 SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYN 290
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ GL A +++ M+ E P +Y +++ LC +E+ +L +MV +
Sbjct: 291 TFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350
Query: 368 GFVPRMGMWREIVGCVTFG 386
G +P + + ++ + G
Sbjct: 351 GCLPDITTFNTLIAALCTG 369
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 130/267 (48%), Gaps = 9/267 (3%)
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVK 164
+ED + I+ E +DGF + I + G + A++ + M P V
Sbjct: 267 VEDALGYIQQE----IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+N+V+N L E +GI G D N L+ LC LE A + +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ P+V T++ L++ LC+ G+ A L E M++ G D VT+N LI L GK+
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ + LL+ M+ GC ++ +Y ++ GL K R EA+E+ +M + +S + +++ L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I GLC K ++D ++ +M+ +G P
Sbjct: 503 IDGLCKDKKIDDAFGLINQMISEGLQP 529
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 8/276 (2%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+LNQ + +Y ++N L + + +E + + + D +N +
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGI--KPDVVTFNTLMK 189
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---G 193
A ++ A+ L +M S P TF ++ V G I+ A++ G
Sbjct: 190 ALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEE---GSIEAALRVKARMLEMG 246
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+N+L+ G C+ G +E A + + EP+ TY+T ++GLC+ +V A
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+++ M EG D D T+NI+++ L K G++EE +L +M +GC P+ ++ ++ L
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
R EA +L ++ + +SP ++ LI+ LC
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALC 402
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 139/288 (48%), Gaps = 2/288 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P +T +IN L +A F ++ + V + C+ D + Y I G + A
Sbjct: 159 PTIITFTTLINGLCKAGEFAQALELFDDM-VARGCQ-PDVYTYTTIINGLCKMGETAAAA 216
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M C P V T++ +++ L +L E I++ G+ L++GL
Sbjct: 217 GLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGL 276
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C + A +L+E N P++ T+S L+ C++GNV EA G+L+ M G++ +
Sbjct: 277 CSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNV 336
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+N L+ G Q +V E KL + M +GC P+ SY ++ G KR EAK+L
Sbjct: 337 ITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNE 396
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
MI + ++P+ VSY LIH C + + + K M G++P + +
Sbjct: 397 MIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTY 444
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ T N+++N + + KLG++ L+ GLC+ G A +
Sbjct: 124 PNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALEL 183
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+ + C+P+V TY+T+++GLC+ G A GL+++M G D VT++ LI L K
Sbjct: 184 FDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCK 243
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
V E + + MK KG P SY ++ GL R+ EA ++ M + P V+
Sbjct: 244 DRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVT 303
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ LI C + V + VLK M + G P + + ++
Sbjct: 304 FSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLM 343
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 1/229 (0%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK-LYGEIQGIYTSAAKLGVEIDACCLN 202
I A+ + M P + FN +L+ +V + Y + + G+ + C LN
Sbjct: 71 IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C +++ F VL + K +P + T++TL++GLC+ G +A L + M +
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D T+ +I+GL K G+ L+++M GC P+ +Y ++ L + EA
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ M + +SP+ VSY LI GLC+ ++ +L +M +P
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMP 299
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 132/332 (39%), Gaps = 65/332 (19%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLCRFSDGFFYNVI 134
P+ Y+ +I+ L + + + DI +K ++ LC FS
Sbjct: 229 PDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFS-------- 280
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
R +A L +M S N P + TF+L++++ E QG+ + ++GV
Sbjct: 281 --------RWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGV 332
Query: 195 EIDACCLN-----------------------------------ILLKGLCENGNLEAAFY 219
E + N IL+ G C ++ A
Sbjct: 333 EPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQ 392
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ +E Q PN +Y+TL+H C+ G + EA L + M + G D T+++L+ G
Sbjct: 393 LFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFC 452
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
KQG + + +L M+G PN Y ++ + A++L + + P
Sbjct: 453 KQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQ 512
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+GLC + L+++ +KM + G P
Sbjct: 513 IYTTIINGLCKEGLLDEALEAFRKMEEDGCPP 544
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 130/292 (44%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT IIN L + A +++++ E C+ D Y+ + +++A+
Sbjct: 194 PDVYTYTTIINGLCKMGETAAAAGLIKKMG-EVGCQ-PDVVTYSTLIDSLCKDRLVNEAL 251
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M + P+V ++ ++ L S + E + L + D ++L+
Sbjct: 252 DIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIF 311
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ GN+ A VL + EPNV TY++LMHG + V EA L + M + G D
Sbjct: 312 CKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDV 371
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+++ILI+G +++E +L M +G PN+ SY +++ + EA+EL
Sbjct: 372 FSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKD 431
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M P +Y L+ G C Q + + + M P + M+ ++
Sbjct: 432 MHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILI 483
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 110/243 (45%), Gaps = 9/243 (3%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
YN Y+L + + K FD + + + C+ D F Y+++ M RI +
Sbjct: 339 YNSLMHGYSLQMEVVEARKLFD--------VMITRGCK-PDVFSYSILINGYCMVKRIDE 389
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A + +M P+ ++ +++ E + ++ G D C ++LL+
Sbjct: 390 AKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLE 449
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+ G L AF + +PN+ Y+ L+ +C+ GN+ A L + G+
Sbjct: 450 GFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQP 509
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D + +I+GL K+G ++E ++ +M+ GC PN SY ++ G L K A +L+
Sbjct: 510 DVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLI 569
Query: 327 GRM 329
G M
Sbjct: 570 GEM 572
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 1/225 (0%)
Query: 151 LFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
LFD M + C P V ++++++N K E + ++ G+ + L+ C
Sbjct: 358 LFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFC 417
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G L A + + P++ TYS L+ G C++G + +AF L M+ + + V
Sbjct: 418 QLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLV 477
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+ ILI + K G + KL + G P+ Y ++ GL + EA E +M
Sbjct: 478 MYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKM 537
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ P+ SY +I G K ++ +M +GFV G
Sbjct: 538 EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEG 582
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PN T + L++ C +V+ F +L ++ G+ +TF LI+GL K G+ + ++L
Sbjct: 124 PNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALEL 183
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+ M +GC P+ +Y ++ GL A L+ +M P V+Y LI LC
Sbjct: 184 FDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCK 243
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
+LV + + M +G P + + ++ G +F +
Sbjct: 244 DRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSR 281
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 76/190 (40%), Gaps = 16/190 (8%)
Query: 88 NPNEALYTLIINKLAQAKRF----DAIEDIMQRIKVEKLCRFS---DGFFYNVIKIYGNM 140
PN YT +I+ Q + + +D+ + LC +S +GF
Sbjct: 403 TPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQ-------- 454
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + KA M P++ + ++++ + + + +++ G++ D
Sbjct: 455 -GYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQI 513
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
++ GLC+ G L+ A + + C PN +Y+ ++ G + + A L+ M
Sbjct: 514 YTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMR 573
Query: 261 SEGIDADTVT 270
+G AD T
Sbjct: 574 DKGFVADEGT 583
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 118/231 (51%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + +A+ M + +C P + +++ L A E + + A G E +
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C G +E A V + C PNVRTY+ L+HGLC+ G VE A L RM
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G++ + VT+ LI G +G ++ +LL M+ G PN ++ ++ L +++
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA+ +G ++ + + + V Y LI GLC ++ D +++KM+ +GFVP
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 149/333 (44%), Gaps = 49/333 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
P+ +Y +++ L +A R + +V S+GF N++ +Y + AG
Sbjct: 175 PDTHVYATMVHGLCEAGR-------TEEAEVLLEEAMSNGFEPNIV-VYNALIDGYCNAG 226
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A++ M C P+V+T+ +++ L + +++ + G+E +
Sbjct: 227 EMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYT 286
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L++G C G+L+ AF +L PN T+S L+ LC++ VEEA L + +
Sbjct: 287 ALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKK 346
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + V + LI GL K GK++ +L+++M +G P++ SY ++ GL +K+ +A
Sbjct: 347 GVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQA 406
Query: 323 -----------------------------------KELVGRMICERMSPSFVSYKKLIHG 347
K++ +MI ++P V+Y +
Sbjct: 407 TLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRS 466
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C + +ED + ++ +MV +G P + + ++
Sbjct: 467 YCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 125/283 (44%), Gaps = 7/283 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P L TL++ LA+ + F +E + R+ L ++ +I Y +AG I A
Sbjct: 40 PLRCLNTLLM-ALARHRMFPDMESLASRMPARNLRTYT-----TLINAY-CLAGDIPAAK 92
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L + P + + A + ++ G A LL GL
Sbjct: 93 QHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGL 152
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
G + A V +C P+ Y+T++HGLCE G EEA LLE S G + +
Sbjct: 153 LGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNI 212
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +N LI G G++E +K+ E M G C PN +Y E+++GL + A L R
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + P+ V+Y LI G CN+ ++ +L M G VP
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVP 315
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 150/318 (47%), Gaps = 12/318 (3%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK- 146
+PN YT +I+ L ++ + + + R+ VE G NV+ + G+ ++
Sbjct: 244 SPNVRTYTELIHGLCKSGKVERAMVLFSRM-VEA------GLEPNVVTYTALIQGQCNEG 296
Query: 147 ----AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
A L M + P+ TF+++++ L + E Q S K GV+++
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC+ G ++AA ++ + + P+ +YS+L+ GLC + + +A +LE M +
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI A VT+ I+I L ++ E K+ ++M G P+ +Y + ++ R +A
Sbjct: 417 GIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDA 476
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
+ ++ +M+ + P+ V+Y LI G N LV + MV +G+ P + ++
Sbjct: 477 ESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRL 536
Query: 383 VTFGKDNRNRVYVTETVD 400
V + N V + + D
Sbjct: 537 VVKKSSSDNSVDIWKIAD 554
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 4/227 (1%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
MP+ N ++T+ ++N A + TS G+ D+ + G C G
Sbjct: 67 MPARN----LRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGM 122
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L A V P + C TY+ L+HGL G V EA + M ++ DT +
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYAT 182
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
++ GL + G+ EE LLE G PN Y ++ G + A ++ M R
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
SP+ +Y +LIHGLC VE + +MV+ G P + + ++
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALI 289
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 19/264 (7%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG- 142
+K NE +YT +I+ L + + DA +++MQ++ S+GF + + G
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM-------ISEGFVPDAHSYSSLIDGL 397
Query: 143 ----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
++S+A L DM S T+ ++++ LV + I+ G+ D
Sbjct: 398 CRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDI 457
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+ ++ CE G +E A ++ + + PN+ TY+TL+ G G V +AF E
Sbjct: 458 VTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEV 517
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV-----LYGL 313
M +G + ++ +L+ + K+ + + + + K ++Y E+ +YGL
Sbjct: 518 MVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDL--QESNYDEIVWKILIYGL 575
Query: 314 LDKKRFPEAKELVGRMICERMSPS 337
L K E L+ M PS
Sbjct: 576 LQKGSVAEFSSLLSVMKEHGYQPS 599
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 145/293 (49%), Gaps = 10/293 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAK----RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG 138
+ K PN +Y+ II+ L + K + + +++ R + +S +++ +
Sbjct: 109 EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYS-----SILHGFC 163
Query: 139 NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
N+ GR ++A M N P TFN++++ L + E Q ++ + + GVE +
Sbjct: 164 NL-GRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNV 222
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N L+ G C ++ A + + ++ C P+VR+Y+ L+ G C+ G ++EA GLL
Sbjct: 223 NTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE 282
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M + + DTVT++ L+ G + G+ ++ KLLE M+ G P+ +Y VL GL +
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH 342
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA EL+ M ++ P+ Y LI G+CN +E + + +G P
Sbjct: 343 LDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQP 395
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 168/360 (46%), Gaps = 16/360 (4%)
Query: 40 HQDSDHHAYKLN-----HKDWLSPTEVLKIFSNLRDPIS----VISVLNQYSK--RKDYN 88
H + DH + + K L P V FS L + +S +I + + + + Y
Sbjct: 22 HSNHDHFHFAFSVLGNMFKLGLQPNHV--TFSTLLNGLSSKAKIIDAVKLFDEMVKMGYE 79
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ IIN L + ++++++ EK C+ + Y+ I I++A+
Sbjct: 80 PDVITYSTIINGLCKMGSTTMAIQLLKKME-EKGCK-PNVVVYSTIIDSLCKDKLITEAM 137
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M + P+V T++ +L+ + E ++ + V D NIL+ GL
Sbjct: 138 EFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGL 197
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G + A V + ++ EPNV TY+ LM G C + ++EA L M +G
Sbjct: 198 SKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSV 257
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++NILI G K G+++E LL M K P++ +Y ++ G R +A++L+
Sbjct: 258 RSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEE 317
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
M + P ++Y ++ GLC Q +++ +LK M + P + ++ ++ G FGK
Sbjct: 318 MRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGK 377
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 140/293 (47%), Gaps = 2/293 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y+ I++ R + + +++ VE+ D +N++ + G I +A
Sbjct: 149 SPNVVTYSSILHGFCNLGRSNEATSLFKQM-VERNV-MPDTVTFNILVDGLSKEGMILEA 206
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
M P+V T+N +++ S E Q ++ + G NIL+KG
Sbjct: 207 QCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKG 266
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C++G ++ A +L E + P+ TYSTLM G C+ G ++A LLE M S G+ D
Sbjct: 267 HCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPD 326
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T++I++ GL KQG ++E +LL+ M+ PN Y ++ G+ + + A+EL
Sbjct: 327 LMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFS 386
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + P V+Y +I GL L + + + M G +P + I+
Sbjct: 387 NLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVII 439
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 2/225 (0%)
Query: 158 NCWPSVKTFNLVLNLLVSAKL--YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
N P V T +++N + + + + KLG++ + + LL GL +
Sbjct: 5 NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A + DE K EP+V TYST+++GLC+ G+ A LL++ME +G + V ++ +I
Sbjct: 65 DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
L K + E M+ L M +G PN +Y +L+G + R EA L +M+ +
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P V++ L+ GL + ++ + V + M+++G P + + ++
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALM 229
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 150/316 (47%), Gaps = 13/316 (4%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
+ +L F NL S+ Q +R + P+ + ++++ L++ + + + +
Sbjct: 156 SSILHGFCNLGRSNEATSLFKQMVER-NVMPDTVTFNILVDGLSKEGMILEAQCVFETM- 213
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKA----IETLFD-MPSYNCWPSVKTFNLVLNLL 173
+EK G NV M G S++ + LF+ M C PSV+++N+++
Sbjct: 214 IEK------GVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGH 267
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ E +G+ + + D + L+KG C++G + A +L+E P++
Sbjct: 268 CKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDL 327
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TYS ++ GLC++G+++EAF LL+ M+ I+ + + ILI G+ GK+E +L
Sbjct: 328 MTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSN 387
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+ KG P+ +Y ++ GLL EA EL M P+ +Y +I G
Sbjct: 388 LFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGD 447
Query: 354 VEDVDWVLKKMVQQGF 369
+ ++++MV +GF
Sbjct: 448 TSNAGRLIEEMVGRGF 463
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 116/261 (44%), Gaps = 2/261 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
K PN Y +++ + D + + I V K C S + +IK + +GR
Sbjct: 215 EKGVEPNVNTYNALMDGYCSQSQMDEAQKLFN-IMVRKGCAPSVRSYNILIKGHCK-SGR 272
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I +A L +M P T++ ++ + Q + G+ D +I
Sbjct: 273 IDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSI 332
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L GLC+ G+L+ AF +L + EPN+ Y+ L+ G+C G +E A L + +G
Sbjct: 333 VLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKG 392
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D VT+ ++ISGL K G E +L M GC PNS +Y ++ G L A
Sbjct: 393 IQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAG 452
Query: 324 ELVGRMICERMSPSFVSYKKL 344
L+ M+ S +++ L
Sbjct: 453 RLIEEMVGRGFSADSSTFQML 473
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 118/231 (51%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + +A+ M + +C P + +++ L A E + + A G E +
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C G +E A V + C PNVRTY+ L+HGLC+ G VE A L RM
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G++ + VT+ LI G +G ++ +LL M+ G PN ++ ++ L +++
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA+ +G ++ + + + V Y LI GLC ++ D +++KM+ +GFVP
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 149/333 (44%), Gaps = 49/333 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
P+ +Y +++ L +A R + +V S+GF N++ +Y + AG
Sbjct: 175 PDTHVYATMVHGLCEAGR-------TEEAEVLLEEAMSNGFEPNIV-VYNALIDGYCNAG 226
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A++ M C P+V+T+ +++ L + +++ + G+E +
Sbjct: 227 EMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYT 286
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L++G C G+L+ AF +L PN T+S L+ LC++ VEEA L + +
Sbjct: 287 ALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKK 346
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + V + LI GL K GK++ +L+++M +G P++ SY ++ GL +K+ +A
Sbjct: 347 GVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQA 406
Query: 323 -----------------------------------KELVGRMICERMSPSFVSYKKLIHG 347
K++ +MI ++P V+Y +
Sbjct: 407 TLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRS 466
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C + +ED + ++ +MV +G P + + ++
Sbjct: 467 YCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 125/283 (44%), Gaps = 7/283 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P L TL++ LA+ + F +E + R+ L ++ +I Y +AG I A
Sbjct: 40 PLRCLNTLLM-ALARHRMFPDMESLASRMPARNLRTYT-----TLINAYC-LAGDIPAAK 92
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L + P + + A + ++ G A LL GL
Sbjct: 93 QHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGL 152
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
G + A V +C P+ Y+T++HGLCE G EEA LLE S G + +
Sbjct: 153 LGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNI 212
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +N LI G G++E +K+ E M G C PN +Y E+++GL + A L R
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + P+ V+Y LI G CN+ ++ +L M G VP
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVP 315
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 150/318 (47%), Gaps = 12/318 (3%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK- 146
+PN YT +I+ L ++ + + + R+ VE G NV+ + G+ ++
Sbjct: 244 SPNVRTYTELIHGLCKSGKVERAMVLFSRM-VEA------GLEPNVVTYTALIQGQCNEG 296
Query: 147 ----AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
A L M + P+ TF+++++ L + E Q S K GV+++
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC+ G ++AA ++ + + P+ +YS+L+ GLC + + +A +LE M +
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI A VT+ I+I L ++ E K+ ++M G P+ +Y + ++ R +A
Sbjct: 417 GIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDA 476
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
+ ++ +M+ + P+ V+Y LI G N LV + MV +G+ P + ++
Sbjct: 477 ESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRL 536
Query: 383 VTFGKDNRNRVYVTETVD 400
V + N V + + D
Sbjct: 537 VVKKSSSDNSVDIWKIAD 554
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 138/325 (42%), Gaps = 24/325 (7%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG- 142
+K NE +YT +I+ L + + DA +++MQ++ S+GF + + G
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM-------ISEGFVPDAHSYSSLIDGL 397
Query: 143 ----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
++S+A L DM S T+ ++++ LV + I+ G+ D
Sbjct: 398 CRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDI 457
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+ ++ CE G +E A ++ + + PN+ TY+TL+ G G V +AF E
Sbjct: 458 VTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEV 517
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMK------------LLERMKGKGCYPNSASY 306
M +G + ++ +L+ + K+ + + LLE + + + Y
Sbjct: 518 MVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIY 577
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+ L R EAK M ++PS Y +I C K++ D +L M +
Sbjct: 578 SCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTK 637
Query: 367 QGFVPRMGMWREIVGCVTFGKDNRN 391
G++P + +R I+ + G + R
Sbjct: 638 SGYLPHLESYRIIISSLCEGGNFRT 662
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 4/227 (1%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
MP+ N ++T+ ++N A + TS G+ D+ + G C G
Sbjct: 67 MPARN----LRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGM 122
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L A V P + C TY+ L+HGL G V EA + M ++ DT +
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYAT 182
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
++ GL + G+ EE LLE G PN Y ++ G + A ++ M R
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
SP+ +Y +LIHGLC VE + +MV+ G P + + ++
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALI 289
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 123/298 (41%), Gaps = 27/298 (9%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISK 146
NP+ YT+ + + R + E ++ ++ + F + YN +I+ Y N+ G +S+
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV--FPNLVTYNTLIRGYANL-GLVSQ 510
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A T M P+ ++ ++L L+V I+ A D L +LL+
Sbjct: 511 AFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIA-------DMKDLQVLLE 563
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
+ E AA YS + LC +EEA M++ +
Sbjct: 564 DITERQLPLAA----------------DIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTP 607
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ +I + + + + LL+ M G P+ SY+ ++ L + F AKE+
Sbjct: 608 SEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVF 667
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
G ++ + + + +K LI+GL + V + +L M + G+ P + I G +T
Sbjct: 668 GDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEIT 725
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 13/204 (6%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDI-----MQRIKV------EKLCRFSDGFFYNV 133
K + PNE YT+++ + + D DI M+ ++V E+ + +
Sbjct: 521 KGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCF 580
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
I+ + R+ +A M + N PS + +++ K+ + + S K G
Sbjct: 581 IRCLCRV-DRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSG 639
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
I++ LCE GN A V + + + + L++GL +KG+V E
Sbjct: 640 YLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFS 699
Query: 254 GLLERMESEGIDADTVTFNILISG 277
LL M+ G T N +I+G
Sbjct: 700 SLLSVMKEHGYQPSN-TINAMITG 722
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 118/231 (51%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + +A+ M + +C P + +++ L A E + + A G E +
Sbjct: 155 AGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C G +E A V + C PNVRTY+ L+HGLC+ G VE A L RM
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G++ + VT+ LI G +G ++ +LL M+ G PN ++ ++ L +++
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA+ +G ++ + + + V Y LI GLC ++ D +++KM+ +GFVP
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 149/333 (44%), Gaps = 49/333 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
P+ +Y +++ L +A R + +V S+GF N++ +Y + AG
Sbjct: 175 PDTHVYATMVHGLCEAGR-------TEEAEVLLEEAMSNGFEPNIV-VYNALIDGYCNAG 226
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A++ M C P+V+T+ +++ L + +++ + G+E +
Sbjct: 227 EMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYT 286
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L++G C G+L+ AF +L PN T+S L+ LC++ VEEA L + +
Sbjct: 287 ALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKK 346
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + V + LI GL K GK++ +L+++M +G P++ SY ++ GL +K+ +A
Sbjct: 347 GVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQA 406
Query: 323 -----------------------------------KELVGRMICERMSPSFVSYKKLIHG 347
K++ +MI ++P V+Y +
Sbjct: 407 TLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRS 466
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C + +ED + ++ +MV +G P + + ++
Sbjct: 467 YCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 125/283 (44%), Gaps = 7/283 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P L TL++ LA+ + F +E + R+ L ++ +I Y +AG I A
Sbjct: 40 PLRCLNTLLM-ALARHRMFPDMESLASRMPARNLRTYT-----TLINAYC-LAGDIPAAK 92
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L + P + + A + ++ G A LL GL
Sbjct: 93 QHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGL 152
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
G + A V +C P+ Y+T++HGLCE G EEA LLE S G + +
Sbjct: 153 LGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNI 212
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +N LI G G++E +K+ E M G C PN +Y E+++GL + A L R
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + P+ V+Y LI G CN+ ++ +L M G VP
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVP 315
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 150/318 (47%), Gaps = 12/318 (3%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK- 146
+PN YT +I+ L ++ + + + R+ VE G NV+ + G+ ++
Sbjct: 244 SPNVRTYTELIHGLCKSGKVERAMVLFSRM-VEA------GLEPNVVTYTALIQGQCNEG 296
Query: 147 ----AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
A L M + P+ TF+++++ L + E Q S K GV+++
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC+ G ++AA ++ + + P+ +YS+L+ GLC + + +A +LE M +
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI A VT+ I+I L ++ E K+ ++M G P+ +Y + ++ R +A
Sbjct: 417 GIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDA 476
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
+ ++ +M+ + P+ V+Y LI G N LV + MV +G+ P + ++
Sbjct: 477 ESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRL 536
Query: 383 VTFGKDNRNRVYVTETVD 400
V + N V + + D
Sbjct: 537 VVKKSSSDNSVDIWKIAD 554
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 4/227 (1%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
MP+ N ++T+ ++N A + TS G+ D+ + G C G
Sbjct: 67 MPARN----LRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGM 122
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L A V P + C TY+ L+HGL G V EA + M ++ DT +
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYAT 182
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
++ GL + G+ EE LLE G PN Y ++ G + A ++ M R
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
SP+ +Y +LIHGLC VE + +MV+ G P + + ++
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALI 289
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 123/304 (40%), Gaps = 35/304 (11%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG- 142
+K NE +YT +I+ L + + DA +++MQ++ S+GF + + G
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM-------ISEGFVPDAHSYSSLIDGL 397
Query: 143 ----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
++S+A L DM S T+ ++++ LV + I+ G+ D
Sbjct: 398 CRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDI 457
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+ ++ CE G +E A ++ + + PN+ TY+TL+ G G V +AF E
Sbjct: 458 VTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEV 517
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M +G + ++ +L+ + K+ + + + + K +VL + +++
Sbjct: 518 MVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKD--------LQVLLEDITERQ 569
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
P A ++ Y I LC +E+ M P ++
Sbjct: 570 LPLAADI---------------YSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTS 614
Query: 379 IVGC 382
I+ C
Sbjct: 615 IIDC 618
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 108/220 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS F +L + K Y + + T G+ D LNIL+ C L AF V
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K C+P+ T++TL+ GLC +G + EA L ++ EG D VT+ L++GL K
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++LL M K C PN +Y ++ L ++ EA L MI + +SP +
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LIH LCN + V +L +MV +P + ++ +V
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 367
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 145/319 (45%), Gaps = 15/319 (4%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
F +LR SVL + K N TLI + K +A+ + I
Sbjct: 195 FCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI------- 247
Query: 125 FSDGFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+GF +V+ YG + G S AI L M NC P+V +N +++ L +
Sbjct: 248 -GEGFQPDVVT-YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ 305
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
E +++ G+ D N L+ LC + +L+E PNV +ST
Sbjct: 306 VTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 365
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++ LC++G + A +++ M G++ D VT+ L+ G + +++E +K+ + M KG
Sbjct: 366 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 425
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C PN SY ++ G +R +A L+ +M + + V+Y LIHGLC+ ++
Sbjct: 426 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 485
Query: 359 WVLKKMVQQGFVPRMGMWR 377
+ +MV G +P + +R
Sbjct: 486 ALFHEMVASGQIPDLVTYR 504
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ P V T N+++N + G + KLG + D N L++GLC G
Sbjct: 176 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 235
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A ++ D+ + +P+V TY TLM+GLC+ GN A LL M + + + +N
Sbjct: 236 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 295
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I L K +V E L M KG P+ +Y +++ L + + L+ M+ +
Sbjct: 296 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 355
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P+ V + ++ LC + ++ V+ M+++G P
Sbjct: 356 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 393
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 142/322 (44%), Gaps = 41/322 (12%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAG 142
+K+ PN Y II+ L + ++ ++ + + + D F YN +I N+
Sbjct: 283 QKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGIS--PDIFTYNSLIHALCNLCE 340
Query: 143 RISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
K + TL +M + P+V F+ V++ L + + K GVE D
Sbjct: 341 W--KHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTY 398
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G C ++ A V D + C PNVR+Y+ L++G C+ +++A GLLE+M
Sbjct: 399 TALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL 458
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G+ ADTVT+N LI GL G+++ + L M G P+ +Y+ +L L E
Sbjct: 459 QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE 518
Query: 322 -----------------------------------AKELVGRMICERMSPSFVSYKKLIH 346
A++L + + + P +Y +IH
Sbjct: 519 AMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIH 578
Query: 347 GLCNQKLVEDVDWVLKKMVQQG 368
GLC + L+++ + + +KM + G
Sbjct: 579 GLCKRGLLDEANKLFRKMDENG 600
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 4/286 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +T ++ +A+ K + + + +++ D + N++ R+ A
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSL--STQMDSFGIPPDVYTLNILINSFCHLRRLGYAF 205
Query: 149 ETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L + C P TFN L+ L V K+ GE ++ G + D L+ G
Sbjct: 206 SVLAKLLKLGCQPDNTTFNTLIRGLCVEGKI-GEALHLFDKTIGEGFQPDVVTYGTLMNG 264
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ GN AA +L ++NC PNV Y+T++ LC+ V EAF L M ++GI D
Sbjct: 265 LCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPD 324
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+N LI L + + LL M PN + V+ L + A ++V
Sbjct: 325 IFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVD 384
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
MI + P V+Y L+ G C + +++ V MV +G VP +
Sbjct: 385 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 163/372 (43%), Gaps = 16/372 (4%)
Query: 2 ILRSHFARNHRQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEV 61
+LRS +N R ++I + ++ + R A S + K D + +
Sbjct: 277 LLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMIT-----KGISPDIFTYNSL 331
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQ----AKRFDAIEDIMQRI 117
+ NL + V ++LN+ K PN +++ +++ L + A D + D+M +
Sbjct: 332 IHALCNLCEWKHVTTLLNEMVNSK-IMPNVVVFSTVVDALCKEGMIAIAHDVV-DMMIKR 389
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
VE D Y + + + +A++ M C P+V+++N+++N +
Sbjct: 390 GVE-----PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ 444
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
+ G+ + G+ D N L+ GLC G L+ A + E P++ TY
Sbjct: 445 RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 504
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
L+ LC+ ++ EA LL+ +E +DAD + +NI I G+ + G++E L + K
Sbjct: 505 ILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSK 564
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G P+ +Y +++GL + EA +L +M S Y +I G
Sbjct: 565 GLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGA 624
Query: 358 DWVLKKMVQQGF 369
+L++M+ +GF
Sbjct: 625 TQLLQEMLAEGF 636
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 39/266 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
PN Y ++IN Q +R D +++++ ++ L +D YN + I+G GR+ A
Sbjct: 428 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGL--IADTVTYNTL-IHGLCHVGRLQHA 484
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
I +M + P + T+ ILL
Sbjct: 485 IALFHEMVASGQIPDLVTYR-----------------------------------ILLDY 509
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+N +L A +L N + ++ Y+ + G+C G +E A L + S+G+ D
Sbjct: 510 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 569
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+NI+I GL K+G ++E KL +M GC + Y ++ G L A +L+
Sbjct: 570 VRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQ 629
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKL 353
M+ E S + ++ L + L
Sbjct: 630 EMLAEGFSADVSTTTLIVEMLSDDGL 655
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 163/334 (48%), Gaps = 20/334 (5%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI- 117
T VL+ LRD + N +++ Y E Y ++ L + + + + + I
Sbjct: 80 TTVLQTLGFLRDTSKALQFFN-WAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIE 138
Query: 118 -KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-- 174
+ + + FF ++++ + N AG ++I+ M S+ PSV TFN +L +L+
Sbjct: 139 KRSRGIVKLEARFFNSLMRNF-NRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKR 197
Query: 175 -----SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
+ K+Y E+ Y GV D NIL++G C NG ++ F + ++ + C
Sbjct: 198 GRTNMAKKVYDEMLSTY------GVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGC 251
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID--ADTVTFNILISGLRKQGKVEEG 287
EP+V TY+TL+ GLC G V A+ +++ M + +D + VT+ LI G + ++E+
Sbjct: 252 EPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKA 311
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV-GRMICERMSPSFVSYKKLIH 346
+ + E M +G N+ +Y ++ GL + ++F + K+++ G SP ++ L+H
Sbjct: 312 LAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMH 371
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C+ ++D V ++M + P + +V
Sbjct: 372 CHCHAGNLDDALKVFERMSELKIQPDSATYSALV 405
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 21/254 (8%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF------YNVIKIYGNMAGR 143
N Y +I L +A++F+ I+DI++ DG F +N + AG
Sbjct: 326 NNITYNTLIKGLCEARKFEKIKDILEGTA-------GDGTFSPDTCTFNTLMHCHCHAGN 378
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS--AAKLGVEIDAC-- 199
+ A++ M P T++ ++ L Y + + + K+ + D C
Sbjct: 379 LDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKP 438
Query: 200 ---CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
N + K LCE G + A + ++ + + +Y TL+ G C++G E + LL
Sbjct: 439 LVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELL 497
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M + D T+ LI+GL K ++ LE+M PNS+++ +L LL++
Sbjct: 498 VLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQ 557
Query: 317 KRFPEAKELVGRMI 330
R E+ L+ M+
Sbjct: 558 GRTSESASLIQLML 571
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 123/309 (39%), Gaps = 47/309 (15%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
NL D + V +++ P+ A Y+ ++ L Q ++ ED++ ++ K+
Sbjct: 378 NLDDALKVFERMSELK----IQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSG 433
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
DG C P V +N + L + + +
Sbjct: 434 DG------------------------------CKPLVAAYNPIFKYLCETGKTKKAEKAF 463
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G + D L+ G C+ G E+ + +L +++ P+ TY +L++GL
Sbjct: 464 RQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHM 522
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN---S 303
A LE+M ++ TF+ +++ L +QG+ E L++ M K N S
Sbjct: 523 DKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFS 582
Query: 304 ASYQEVLYGL-LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVL 361
+L+G ++ K F L G+ +M ++LI LC+ +K+++ +L
Sbjct: 583 TGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKM-------EELIRYLCHCRKVIQGSKLLL 635
Query: 362 KKMVQQGFV 370
+ FV
Sbjct: 636 FSLESHQFV 644
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 144/301 (47%), Gaps = 26/301 (8%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL + K P+ Y+ +IN + D +I++ + DG +V+
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTR------DGIAPDVV-T 115
Query: 137 YGNMA------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA-------KLYGEIQ 183
Y ++ G++ +A E + +M P TF+ ++ +A KLY EI
Sbjct: 116 YTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEI- 174
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ +S+ K D L+ G C++GNLE A +L + C PNV TYS+L+HGL
Sbjct: 175 -LTSSSWK----PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGL 229
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C+ G++++A L RM S+G + VT+ LI GL KV+ L++ M C P++
Sbjct: 230 CKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDT 289
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
SY +L G R EAK+L M + P ++Y L+ G CN +E+ ++L+
Sbjct: 290 VSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLEN 349
Query: 364 M 364
M
Sbjct: 350 M 350
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 139/300 (46%), Gaps = 2/300 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K P++ ++ +I A++ D + + I + D Y + +G
Sbjct: 140 KLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK-PDVVTYTALIDGFCKSG 198
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ KA++ L M C P+V T++ +L+ L A + ++ G +
Sbjct: 199 NLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYT 258
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC ++AA ++DE C P+ +Y+ L+ G C G +EEA L + M ++
Sbjct: 259 TLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATK 318
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMK-GKGCYPNSASYQEVLYGLLDKKRFPE 321
D +T+ L+ G ++EE LLE MK G P+ +Y V+ G KRF E
Sbjct: 319 SCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVE 378
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A E + MI ++P+ V+Y LI GLC V+ VLK MV + P +G + ++G
Sbjct: 379 AAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIG 438
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 143/298 (47%), Gaps = 6/298 (2%)
Query: 78 LNQYSKRKDY-NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
L + K +++ PNE Y +++N L +A+ ++++ ++ K + VI
Sbjct: 27 LACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVING 86
Query: 137 YGNMAGRISKAIETLFDMPSYN-CWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGV 194
+ G + +A E L +M + + P V T+ V++ L K+ + + K GV
Sbjct: 87 FCKQ-GEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLK-GV 144
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDE-FPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
E D + L+ G C ++ A + E + +P+V TY+ L+ G C+ GN+E+A
Sbjct: 145 EPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAM 204
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+L ME + VT++ L+ GL K G +++ + L RM KGC PN +Y +++GL
Sbjct: 205 KMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGL 264
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ A+ L+ M P VSY L+ G C +E+ + K+M + +P
Sbjct: 265 CAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLP 322
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 1/234 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + +A++ M S C P+V T+ +++ L +A + + D
Sbjct: 232 AGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVS 291
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N LL G C G +E A + E ++C P+ TY+ L+ G C +EEA LLE M+
Sbjct: 292 YNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMK 351
Query: 261 SE-GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ GID D VT++I+++G + + E + ++ M + PN+ +Y ++ GL R
Sbjct: 352 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 411
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
A E++ M+ +R+ PS ++ +I LC +++ +L M G P M
Sbjct: 412 DHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGM 465
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 18/288 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN YT +I+ L A + DA +M + C D YN + GRI +A
Sbjct: 252 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT--CCPPDTVSYNALLDGYCRLGRIEEAK 309
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE----IQGIYTSAAKLGVEIDACCLNIL 204
+ +M + +C P T+ ++ +A E ++ + T+A G++ D +I+
Sbjct: 310 QLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA---GIDPDVVTYSIV 366
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G A + E +N PN TYS+L+ GLC+ G V+ A +L+ M ++ +
Sbjct: 367 VAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRV 426
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ TFN +I L + G ++E KLL M G P +Y +L G R A E
Sbjct: 427 EPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYE 486
Query: 325 LVGRM--------ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
L M + P ++ LI GLC + ++ V++++
Sbjct: 487 LFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEEL 533
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
C+P V T++ ++ G C+ +++A E+M E + + T+N++++GL K +
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAY 61
Query: 289 KLLERMK-GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC-ERMSPSFVSYKKLIH 346
++L+ M+ GK P+ +Y V+ G + A E++ M+ + ++P V+Y ++
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
GLC ++ ++++M +G P
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEP 146
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 9/187 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
++ PN Y+ +I+ L +A R D ++++ + V K S G F +VI + G +
Sbjct: 389 RNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNM-VNKRVEPSVGTFNSVIGALCRL-GDM 446
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQGIYTSAAKLGVEID 197
+A + L M ++ P + T+ +L + ++ +L+ ++ ++ +
Sbjct: 447 DEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVP 506
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+ L++GLC+ ++ A V++E + CEP ++ GL G EEA L+
Sbjct: 507 EQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLIN 566
Query: 258 RMESEGI 264
+ G+
Sbjct: 567 SISKVGL 573
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 2/298 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K PN YT +I+ L + + R+ + + F + YN +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV--FPNTVTYNALINILVENR 404
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI A L M C P++ T+N ++ + + + + G + N
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++KG C++GN +A +LD C+P+ +Y+ L+ G C+ +E AFGL M +
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + VT+ LI G K K++ LLE MK GC PN +Y +++GL + F A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+EL MI E + P+ V+Y +I GLC + KM++QG +P + + ++
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 149/315 (47%), Gaps = 3/315 (0%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
D S + V NQ +K + PN Y+ +IN L + R + D+++ + + + +
Sbjct: 265 DLDSALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTC 323
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+I + G A DM + C P+V T+ +++ L + L G++
Sbjct: 324 TGPIIALCD--MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
++ GV + N L+ L EN ++ AF VL+ + C PN+ TY+ ++ G C G+
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
++A ++ M G A+ VT+N +I G G +++L+ M+ GC P+ SY E+
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ G + A L M+ + + P+ V+Y LI G C + ++ +L+ M + G
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561
Query: 370 VPRMGMWREIVGCVT 384
P + + ++ +T
Sbjct: 562 RPNVQTYNVLIHGLT 576
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 117/252 (46%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F Y+ + I+ + G + ++ M S P++ +N V+N L + + I
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ + D ++ G C +L++A V ++ K+ CEPN TYSTL++GLC+ G
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V EAF L+ M GI T I L G E+ +L MK KGC PN +Y
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ GL A L RM + + P+ V+Y LI+ L + ++ VL M + G
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420
Query: 369 FVPRMGMWREIV 380
P + + E++
Sbjct: 421 CSPNIVTYNEMI 432
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTS 188
+ +IK Y + +G + A+ L M C P ++ L+ +K+ G++
Sbjct: 463 YNTIIKGYCD-SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF-GLFNE 520
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+ + L+ G C++ L+ A +L+ + C PNV+TY+ L+HGL ++ N
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
A L + M EGI + VT+ +I GL K G +++ +M +GC PN +Y
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 640
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ L + + EA+ L + + P ++Y K+I VE L +M++ G
Sbjct: 641 LIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700
Query: 369 FVPRM 373
P +
Sbjct: 701 CQPTL 705
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 2/225 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+E YT +I + + ++ + + + LC ++ + +I Y ++ A
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP-NEVTYTALIDGYCK-DEKLDTAT 550
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M C P+V+T+N++++ L + + + + G+ + ++ GL
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+NG+ A + ++ +Q C PN+ TYS+L+ L ++G VEEA L +E G+ D
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+T+ +I GKVE L RM GC P +Y ++ GL
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 132/297 (44%), Gaps = 3/297 (1%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E++K + L DP + V+N +R ++ N Y II + + I+ ++
Sbjct: 430 EMIKGYCILGDPKKAMLVMNNMLQR-GHSANLVTYNTIIKGYCDSGNTTSALRILDLMR- 487
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
+ C+ + + +I + ++ ++ A +M P+ T+ +++ +
Sbjct: 488 DGGCKPDEWSYTELICGFCKIS-KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ + G + N+L+ GL + N A + ++ PNV TY+ +
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ GLC+ G+ A + +M +G + +T++ LI L ++GKVEE L ++ G
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
P+ +Y +++ + + A +GRMI P+ +Y LI GL N+ L+ D
Sbjct: 667 IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 124/310 (40%), Gaps = 28/310 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY-NVIKIYGNMAGRISKA 147
PN Y+ +I L Q + + E++ ++ L D Y +I+ Y M+G++ A
Sbjct: 633 PNLLTYSSLIRALGQEGKVEEAENLFAELERHGL--IPDEITYVKMIEAY-IMSGKVEHA 689
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L M C P++ T+ +++ L + L + + A L + C
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR-----LAALPDVVPNCSFGY---- 740
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ + +A + + + + +V+ + L+ L G EA LL M S+G+ D
Sbjct: 741 --QTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+N L+ L + V+ M + + M +GC + Y+E++ L R EA+
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM------------ 375
M+ +P V LI GL + L M + ++P +
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKR 918
Query: 376 -WREIVGCVT 384
W+ + GC+T
Sbjct: 919 SWKHVAGCIT 928
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 153/336 (45%), Gaps = 41/336 (12%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQ---AKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+SVL++ +R+ P +Y +I+ F + ++Q + + C G
Sbjct: 135 LSVLDEM-RRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLH-GRGCALDVGNCN 192
Query: 132 NVIKIYGNMAGRISKAIETLFDMP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
V+ + G + +A+ L D+P S+ C P V ++N VL L AK +G +Q +
Sbjct: 193 LVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMV 252
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
++G + N L+ LC NG E VL + C P++R Y+T++ G+C++G++E
Sbjct: 253 RVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLE 312
Query: 251 EAFGLLERMESEGIDA-----------------------------------DTVTFNILI 275
A +L+RM S G+ D VTFNIL+
Sbjct: 313 VAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILV 372
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+ G V ++LLE+M GC P+ +Y V+ G + EA L+ M
Sbjct: 373 DFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCR 432
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P+ +SY ++ GLC+ + D + ++ +M++QG P
Sbjct: 433 PNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSP 468
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 40/342 (11%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLCRFSDGFFYNV 133
+P+ Y ++ L AKR+ ++D+M+ + + LCR +G F V
Sbjct: 222 DPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCR--NGLFERV 279
Query: 134 IKIYGNMA---------------------GRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
++ M G + A E L MPSY P+V +N VL
Sbjct: 280 HQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKG 339
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
L SA+ + + + + +D NIL+ C+NG + +L++ + C P+
Sbjct: 340 LCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPD 399
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
V TY+T+++G C++G ++EA LL+ M + G +T+++ I++ GL + + L+
Sbjct: 400 VITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMS 459
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+M +GC PN ++ V+ L K +A EL+ +M+ SP +SY +I GL
Sbjct: 460 QMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAG 519
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR-NRV 393
++ +L MV +G P ++ I K+ R NRV
Sbjct: 520 KTDEALELLNVMVNKGMSPNTIIYSSIAS--ALSKEGRINRV 559
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++ L A+R++ E+++ + + C D F N++ + G + + I
Sbjct: 328 PNVVCYNTVLKGLCSAERWEQAEELLAEM-FDNDCPLDDVTF-NILVDFFCQNGLVYRVI 385
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M + C P V T+ V+N L E + S A G + I+LKGL
Sbjct: 386 ELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGL 445
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C A ++ + +Q C PN T++T+++ LC+KG VE+A LL++M G D
Sbjct: 446 CSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDL 505
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++++ +I GL K GK +E ++LL M KG PN+ Y + L + R ++
Sbjct: 506 ISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDN 565
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + V Y +I LC + + L MV G +P
Sbjct: 566 IQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMP 608
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 5/228 (2%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDA 198
GRI+ A+ L +M C P ++++L S G + L G +D
Sbjct: 129 GRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDV 188
Query: 199 CCLNILLKGLC-ENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
N++L +C + G+++ A +L + P C+P+V +Y+ ++ GLC L+
Sbjct: 189 GNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLM 248
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E M G + VTFN LI L + G E ++L +M GC P+ Y VL G+ +
Sbjct: 249 EEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKE 308
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A E++ RM + P+ V Y ++ GLC+ + E + +L +M
Sbjct: 309 GHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEM 356
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 5/206 (2%)
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
G++ AA + V +A +++ LC G + A VLDE ++ C P Y +
Sbjct: 97 GQLASARRLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVI 156
Query: 240 MHGLCEKGNV---EEAFGLLERMESEGIDADTVTFNILISGLRKQG-KVEEGMKLLERMK 295
+ C +G A +L+ + G D N++++ + QG V+E ++LL +
Sbjct: 157 LEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLP 216
Query: 296 GK-GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
GC P+ SY VL GL KR+ ++L+ M+ P+ V++ LI LC L
Sbjct: 217 TSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLF 276
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
E V VL +MV G P + M+ ++
Sbjct: 277 ERVHQVLAQMVDHGCTPDIRMYATVL 302
>gi|449468996|ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
gi|449484169|ref|XP_004156805.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
Length = 399
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 147/306 (48%), Gaps = 3/306 (0%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
RDP + + + + N + +++LA A+RFD IE +++ K R +G
Sbjct: 48 RDPEKLFHLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGR-REG 106
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F +I +YG A I A++T +DM Y C +VK+FN VL +L+ ++ G ++ +
Sbjct: 107 FIIRIIMLYGK-AEMIKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSE 165
Query: 189 AA-KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
A K +E+D +NIL+K C+ G L A+ ++ E K +P+V TY+TL+ +
Sbjct: 166 APEKFDIELDIISVNILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDR 225
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
E + GL M G + TFN+ I L ++ + + KL++ M+ G P+ +Y
Sbjct: 226 QSEISNGLWNLMVLRGCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYN 285
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
V+ G AK + + P+ Y+ +IH LC + + K + +
Sbjct: 286 LVIKGFCQAGLLDMAKRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNK 345
Query: 368 GFVPRM 373
+ P +
Sbjct: 346 NWFPNI 351
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 1/152 (0%)
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C P++ TFN+ + L+ + + + +G+ D N+++KG C+ G L+ A
Sbjct: 242 CLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMAK 301
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
V +PNV+ Y T++H LC+ + A + + ++ + T + L+ GL
Sbjct: 302 RVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKGL 361
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
K G+ + +L+ + K P S + E L
Sbjct: 362 NKMGEAGKA-QLILALARKRVPPFSKNQLEAL 392
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 2/298 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K PN YT +I+ L + + R+ + + F + YN +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV--FPNTVTYNALINILVENR 404
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI A L M C P++ T+N ++ + + + + G + N
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++KG C++GN +A +LD C+P+ +Y+ L+ G C+ +E AFGL M +
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + VT+ LI G K K++ LLE MK GC PN +Y +++GL + F A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+EL MI E + P+ V+Y +I GLC + KM++QG +P + + ++
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 148/312 (47%), Gaps = 3/312 (0%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
S + V NQ +K + PN Y+ +IN L + R + D+++ + + + +
Sbjct: 268 SALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP 326
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+I + G A DM + C P+V T+ +++ L + L G++ ++
Sbjct: 327 IIALCD--MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 384
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GV + N L+ L EN ++ AF VL+ + C PN+ TY+ ++ G C G+ ++A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
++ M G A+ VT+N +I G G +++L+ M+ GC P+ SY E++ G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+ A L M+ + + P+ V+Y LI G C + ++ +L+ M + G P
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564
Query: 373 MGMWREIVGCVT 384
+ + ++ +T
Sbjct: 565 VQTYNVLIHGLT 576
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 117/252 (46%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F Y+ + I+ + G + ++ M S P++ +N V+N L + + I
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ + D ++ G C +L++A V ++ K+ CEPN TYSTL++GLC+ G
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V EAF L+ M GI T I L G E+ +L MK KGC PN +Y
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ GL A L RM + + P+ V+Y LI+ L + ++ VL M + G
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420
Query: 369 FVPRMGMWREIV 380
P + + E++
Sbjct: 421 CSPNIVTYNEMI 432
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTS 188
+ +IK Y + +G + A+ L M C P ++ L+ +K+ G++
Sbjct: 463 YNTIIKGYCD-SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF-GLFNE 520
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+ + L+ G C++ L+ A +L+ + C PNV+TY+ L+HGL ++ N
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
A L + M EGI + VT+ +I GL K G +++ +M +GC PN +Y
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 640
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ L + + EA+ L + + P ++Y K+I VE L +M++ G
Sbjct: 641 LIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700
Query: 369 FVPRM 373
P +
Sbjct: 701 CQPTL 705
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 2/225 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+E YT +I + + ++ + + + LC ++ + +I Y ++ A
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP-NEVTYTALIDGYCK-DEKLDTAT 550
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M C P+V+T+N++++ L + + + + G+ + ++ GL
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+NG+ A + ++ +Q C PN+ TYS+L+ L ++G VEEA L +E G+ D
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+T+ +I GKVE L RM GC P +Y ++ GL
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 132/297 (44%), Gaps = 3/297 (1%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E++K + L DP + V+N +R ++ N Y II + + I+ ++
Sbjct: 430 EMIKGYCILGDPKKAMLVMNNMLQR-GHSANLVTYNTIIKGYCDSGNTTSALRILDLMR- 487
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
+ C+ + + +I + ++ ++ A +M P+ T+ +++ +
Sbjct: 488 DGGCKPDEWSYTELICGFCKIS-KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ + G + N+L+ GL + N A + ++ PNV TY+ +
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ GLC+ G+ A + +M +G + +T++ LI L ++GKVEE L ++ G
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
P+ +Y +++ + + A +GRMI P+ +Y LI GL N+ L+ D
Sbjct: 667 IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 15/261 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY-NVIKIYGNMAGRISKA 147
PN Y+ +I L Q + + E++ ++ L D Y +I+ Y M+G++ A
Sbjct: 633 PNLLTYSSLIRALGQEGKVEEAENLFAELERHGL--IPDEITYVKMIEAY-IMSGKVEHA 689
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L M C P++ T+ +++ L + L + + A L + C
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR-----LAALPDVVPNCSFGY---- 740
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ + +A + + + + +V+ + L+ L G EA LL M S+G+ D
Sbjct: 741 --QTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+N L+ L + V+ M + + M +GC + Y+E++ L R EA+
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M+ +P V LI GL
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGL 879
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
SV+ N +++ L +A + E + S G+ D N LL L N++ A V
Sbjct: 763 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 822
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
Q CE ++ Y L+ LC+ +EA E M + D V +LI GL +
Sbjct: 823 KHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRD 882
Query: 282 GKVEEGMKLLERMKGKGCYPNSASY 306
G + M+ L M+ + P+ Y
Sbjct: 883 GYKDLCMEFLHIMETRRYMPSFHIY 907
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 162/315 (51%), Gaps = 6/315 (1%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
LSP VLK+ + ++P + ++ + ++ Y + +Y I+ +L++A+ + I++
Sbjct: 8 LSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVE 67
Query: 116 RIKVEKLCRFSDGFFYNVIKIYG--NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
I+ ++ C+ + +VIK YG +M R + + ++ + C P ++++N +LN
Sbjct: 68 LIRSQE-CKCDEDVALSVIKTYGKNSMPDRALDVFKRMREI--FGCEPGIRSYNTLLNAF 124
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
V AK + +++ ++ GV + N+L+K C+ E A L+ K+ +P+V
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDV 184
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+YST+++ L + G +++A L + M + D +NILI G K+ + M+L ++
Sbjct: 185 FSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDK 244
Query: 294 -MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
++ YPN ++ ++ GL R + ++ RM +Y LIHGLC++
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEG 304
Query: 353 LVEDVDWVLKKMVQQ 367
V+ + V ++V++
Sbjct: 305 NVDKAESVFNELVER 319
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 140/319 (43%), Gaps = 8/319 (2%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
D + + + Q + KD Y+ +I+ L D E + + K F D
Sbjct: 273 DCLKIWDRMKQNEREKDLYT----YSSLIHGLCDEGNVDKAESVFNELVERK--AFIDVV 326
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN + G+I +++E M N ++ ++N+++ L+ E I+
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEQRNS-VNIVSYNILIKGLLENGKIDEATMIWRLM 385
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G D I + GLC NG + A V+ E + +V Y++++ LC+K +
Sbjct: 386 PAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRL 445
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EEA L++ M G++ ++ N LI GL + ++ + L+ M GC P SY +
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNIL 505
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ GL + +F EA V M+ + P +Y L+ GLC + +E + + +Q G
Sbjct: 506 ICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGL 565
Query: 370 VPRMGMWREIV-GCVTFGK 387
P + M ++ G + GK
Sbjct: 566 EPDVMMHNILIHGLCSVGK 584
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ GLCE G A + E + +P+++TYS L+ GLC +E A L +
Sbjct: 503 NILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQ 562
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G++ D + NILI GL GK+++ M ++ M+ + C N +Y ++ G +
Sbjct: 563 SGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNR 622
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A + G M + P +SY ++ GLC V G P + W +V
Sbjct: 623 ATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVR 682
Query: 382 CVT 384
V
Sbjct: 683 AVV 685
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 113/239 (47%), Gaps = 6/239 (2%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G ++KA+ + ++ S V + +++ L + E + +K GVE+++
Sbjct: 408 GYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVC 467
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GL + L A ++ K C P V +Y+ L+ GLCE G EA ++ M
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLE 527
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D T++IL+ GL + K+E ++L + G P+ + +++GL + +
Sbjct: 528 NGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDD 587
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ++ M + + V+Y L+ G V D + + V G++ +MG+ +I+
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGYFK---VRDSN---RATVIWGYMYKMGLQPDII 640
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 89/187 (47%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN++ AG+ +A + +M P +KT++++L L + ++
Sbjct: 502 YNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFL 561
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ G+E D NIL+ GLC G L+ A V+ +NC N+ TY+TLM G + +
Sbjct: 562 QSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSN 621
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A + M G+ D +++N ++ GL +V ++ + + G +P ++ ++
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILV 681
Query: 311 YGLLDKK 317
++++K
Sbjct: 682 RAVVNRK 688
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 2/170 (1%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+LK L N AAF + D + + Y ++ L E V ++E + S+
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQ 72
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-GCYPNSASYQEVLYGLLDKKRFPE 321
D +I K + + + +RM+ GC P SY +L ++ K++ +
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVK 132
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ L ++P+ +Y LI C +K E L M ++GF P
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKP 182
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 154/311 (49%), Gaps = 13/311 (4%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFF 130
I V+ +L + +P+ Y II +A R D+ ++ R+K + FS D
Sbjct: 112 IQVMHILENHG-----HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKG---FSPDIVT 163
Query: 131 YNVIKIYGNMAGR--ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
YN++ G++ R + A+E + NC P+V T+ +++ + E +
Sbjct: 164 YNIL--IGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDE 221
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
++ ++ D N +++G+C G ++ AF ++ + P+V TY+ L+ GL +G
Sbjct: 222 MLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGK 281
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
E + L+ M + G +A+ VT+++LIS + + GKVEEG+ LL+ MK KG P+ Y
Sbjct: 282 WEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDP 341
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ L + R A E++ MI + P V+Y ++ LC QK ++ + +K+ + G
Sbjct: 342 LIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVG 401
Query: 369 FVPRMGMWREI 379
P + +
Sbjct: 402 CSPNASSYNSM 412
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 138/299 (46%), Gaps = 3/299 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P+ L T +I+ L +K D +M ++ D YN I A RI
Sbjct: 86 KGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG---HPDLIAYNAIITGFCRANRI 142
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + L M + P + T+N+++ L S + K + IL
Sbjct: 143 DSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTIL 202
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++ G ++ A +LDE + N +P++ TY++++ G+C +G V+ AF ++ + S+G
Sbjct: 203 IEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGY 262
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+NIL+ GL QGK E G +L+ M +GC N +Y ++ + + E
Sbjct: 263 APDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVG 322
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
L+ M + + P Y LI LC + V+ VL M+ G VP + + I+ C+
Sbjct: 323 LLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACL 381
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 156/332 (46%), Gaps = 3/332 (0%)
Query: 52 HKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIE 111
H D ++ ++ F S VL++ K K ++P+ Y ++I L D+
Sbjct: 123 HPDLIAYNAIITGFCRANRIDSAYQVLDRM-KNKGFSPDIVTYNILIGSLCSRGMLDSAL 181
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+ ++ E C+ + Y ++ + G I +A++ L +M N P + T+N ++
Sbjct: 182 EFKNQLLKEN-CKPT-VVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIR 239
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
+ I +S + G D NILL+GL G EA + ++ + + CE
Sbjct: 240 GMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEA 299
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
NV TYS L+ +C G VEE GLL+ M+ +G+ D ++ LI+ L K+G+V+ +++L
Sbjct: 300 NVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVL 359
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ M GC P+ +Y +L L +KR EA + ++ SP+ SY + L +
Sbjct: 360 DVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWST 419
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
++ +M+ +G P + ++ C+
Sbjct: 420 GHKVRALGMILEMLDKGVDPDGITYNSLISCL 451
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 139/320 (43%), Gaps = 7/320 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y II + + D I+ I + D YN++ G+
Sbjct: 229 PDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYA--PDVITYNILLRGLLNQGKWEAGY 286
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E + DM + C +V T++++++ + E G+ K G++ D C + L+ L
Sbjct: 287 ELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAAL 346
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G ++ A VLD C P++ Y+T++ LC++ +EA + E++ G +
Sbjct: 347 CKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNA 406
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++N + S L G + ++ M KG P+ +Y ++ L EA EL+
Sbjct: 407 SSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVD 466
Query: 329 MICE--RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
M E PS VSY ++ GLC V D VL MV +G P + ++ + FG
Sbjct: 467 MEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFG 526
Query: 387 ---KDNRNRVYVTETVDSLA 403
D R+ +D+++
Sbjct: 527 GCLNDARDLATTLVNMDAIS 546
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 4/210 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+K P+ Y +I L + R D +++ + + C D YN I
Sbjct: 328 KKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLD-VMISDGC-VPDIVNYNTILACLCKQK 385
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R +A+ + C P+ ++N + + L S G+ GV+ D N
Sbjct: 386 RADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYN 445
Query: 203 ILLKGLCENGNLEAAFYVLD--EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ LC +G ++ A +L E C+P+V +Y+ ++ GLC+ V +A +L M
Sbjct: 446 SLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMV 505
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKL 290
+G + T+ LI G+ G + + L
Sbjct: 506 DKGCRPNETTYTFLIEGIGFGGCLNDARDL 535
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 67/163 (41%), Gaps = 4/163 (2%)
Query: 222 DEFPKQNCEPN---VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
D P N PN + S + L E N+ + + ++ +D +S
Sbjct: 8 DFLPLFNPHPNRTNSHSNSRTLPILNETTNINRTLSSVSKPQTHTLDFKDTHLLKSLSRS 67
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G E + L + KG P+ ++++GL K +A +++ ++ P
Sbjct: 68 CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVM-HILENHGHPDL 126
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
++Y +I G C ++ VL +M +GF P + + ++G
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIG 169
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 149/348 (42%), Gaps = 44/348 (12%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
S +S+L KR Y P+ A ++++IN+L +A + ++ +Q + R S F YN
Sbjct: 67 SALSLLETMIKR-GYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYN 125
Query: 133 --------------VIKIYGNMA-------------------------GRISKAIETLFD 153
I+ M GR K + + D
Sbjct: 126 SLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 185
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+ NC P+V T+N LN L+ + QG+Y G D + L+ G
Sbjct: 186 L---NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A + + + C PN TY+ L+HGLC++ +EA L +M G D D VT+
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTT 302
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ G GK+E+ +++ + M KG P+ +Y +L G + EA++L M+
Sbjct: 303 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE 362
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ-QGFVPRMGMWREIV 380
P VS+ +I GL K ++D V ++M Q G P + + ++
Sbjct: 363 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 1/231 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GRI+ A +M S C P V T++ +++ A+ + + ++ + G +A
Sbjct: 206 GRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTY 265
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL GLC+ + A + + ++ C+P+ TY+TL++G C G +E+A + + M S
Sbjct: 266 NCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVS 325
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G D D V +N L+ G + GK E +L + M + C P++ S+ ++ GL KR +
Sbjct: 326 KGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDD 385
Query: 322 AKELVGRMICER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A E+ RM + SP V+Y LI GLC ++ + + V K++ + P
Sbjct: 386 AVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 436
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 7/272 (2%)
Query: 81 YSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG 138
Y + D N PN Y +N L + R + + + + + C D Y+ + I+G
Sbjct: 180 YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM-ISAGCS-PDVITYSTL-IHG 236
Query: 139 -NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
++A + +A E M S C P+ T+N +L+ L E ++ + G + D
Sbjct: 237 FSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPD 296
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
LL G C G +E A V DE + +P+V Y+ L+ G G EA L +
Sbjct: 297 KVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQ 356
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGLLDK 316
M S DTV+ NI+I GL K ++++ +++ ERM + GC P+ +Y +++GL +
Sbjct: 357 VMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGE 416
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+R EA ++ + ++SP ++ L+ +
Sbjct: 417 QRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 204 LLKGLCENGNLEAAF---YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L GLC++G +E AF + E + P+ T +++ LC+ G V+ A LLE M
Sbjct: 17 FLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLETMI 76
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERM------KGKGCYPNSASYQEVLYGLL 314
G D T ++LI+ L K K++E + L+ M + C+ SY +L L
Sbjct: 77 KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCF----SYNSLLNSLC 132
Query: 315 DKKRFPEAKELVGRMICER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
K+ +A + M+ ER + P VSY LI G C + + + K+M+ VP +
Sbjct: 133 KAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNV 192
Query: 374 GMW 376
+
Sbjct: 193 TTY 195
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 93/196 (47%), Gaps = 5/196 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKA 147
PN Y +++ L + + D ++ +++ VE+ C D Y + +YG G+I +A
Sbjct: 260 PNAVTYNCLLHGLCKESKPDEAHELFRKM-VERGCD-PDKVTYTTL-LYGFCNVGKIEQA 316
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E +M S P V +N +L A GE + ++ + D NI++ G
Sbjct: 317 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDG 376
Query: 208 LCENGNLEAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
L + L+ A V + + + C P++ TY++L+ GLC + + EA + + ++ +
Sbjct: 377 LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 436
Query: 267 DTVTFNILISGLRKQG 282
D FN+L+ + G
Sbjct: 437 DPHAFNVLLEAMYAAG 452
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV---TFNILISGLRKQGKVEEGM 288
N ++ + GLC+ G +E+AF M+ + T + +I L K G+V+ +
Sbjct: 10 NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV---GRMICERMSPSFVSYKKLI 345
LLE M +G P+ A++ ++ L + EA+E + R I R S F SY L+
Sbjct: 70 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCF-SYNSLL 128
Query: 346 HGLCNQKLVEDVDWVLKKMV-QQGFVP 371
+ LC K V + MV ++ VP
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVP 155
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 2/298 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K PN YT +I+ L + + R+ + + F + YN +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGV--FPNTVTYNALINILVENR 404
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI A L M C P++ T+N ++ + + + + G + N
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++KG C++GN +A +LD C+P+ +Y+ L+ G C+ +E AFGL M +
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + VT+ LI G K K++ LLE MK GC PN +Y +++GL + F A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+EL MI E + P+ V+Y +I GLC + KM++QG +P + + ++
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 148/312 (47%), Gaps = 3/312 (0%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
S + V NQ +K + PN Y+ +IN L + R + D+++ + + + +
Sbjct: 268 SALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP 326
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+I + G A DM + C P+V T+ +++ L + + G++ ++
Sbjct: 327 IIALCD--MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRD 384
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GV + N L+ L EN ++ AF VL+ + C PN+ TY+ ++ G C G+ ++A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
++ M G A+ VT+N +I G G +++L+ M+ GC P+ SY E++ G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+ A L M+ + + P+ V+Y LI G C + ++ +L+ M + G P
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564
Query: 373 MGMWREIVGCVT 384
+ + ++ +T
Sbjct: 565 VQTYNVLIHGLT 576
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 117/252 (46%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F Y+ + I+ + G + ++ M S P++ +N V+N L + + I
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ + D ++ G C +L++A V ++ K+ CEPN TYSTL++GLC+ G
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V EAF L+ M GI T I L G E+ +L MK KGC PN +Y
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ GL A L RM + + P+ V+Y LI+ L + ++ VL M + G
Sbjct: 361 LISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420
Query: 369 FVPRMGMWREIV 380
P + + E++
Sbjct: 421 CSPNIVTYNEMI 432
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTS 188
+ +IK Y + +G + A+ L M C P ++ L+ +K+ G++
Sbjct: 463 YNTIIKGYCD-SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF-GLFNE 520
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+ + L+ G C++ L+ A +L+ + C PNV+TY+ L+HGL ++ N
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
A L + M EGI + VT+ +I GL K G +++ +M +GC PN +Y
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 640
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ L + + EA+ L + + P ++Y K+I VE L +M++ G
Sbjct: 641 LIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700
Query: 369 FVPRM 373
P +
Sbjct: 701 CQPTL 705
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 2/225 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+E YT +I + + ++ + + + LC ++ + +I Y ++ A
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP-NEVTYTALIDGYCK-DEKLDTAT 550
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M C P+V+T+N++++ L + + + + G+ + ++ GL
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+NG+ A + ++ +Q C PN+ TYS+L+ L ++G VEEA L +E G+ D
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+T+ +I GKVE L RM GC P +Y ++ GL
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 132/297 (44%), Gaps = 3/297 (1%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E++K + L DP + V+N +R ++ N Y II + + I+ ++
Sbjct: 430 EMIKGYCILGDPKKAMLVMNNMLQR-GHSANLVTYNTIIKGYCDSGNTTSALRILDLMR- 487
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
+ C+ + + +I + ++ ++ A +M P+ T+ +++ +
Sbjct: 488 DGGCKPDEWSYTELICGFCKIS-KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ + G + N+L+ GL + N A + ++ PNV TY+ +
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ GLC+ G+ A + +M +G + +T++ LI L ++GKVEE L ++ G
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
P+ +Y +++ + + A +GRMI P+ +Y LI GL N+ L+ D
Sbjct: 667 IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 15/261 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY-NVIKIYGNMAGRISKA 147
PN Y+ +I L Q + + E++ ++ L D Y +I+ Y M+G++ A
Sbjct: 633 PNLLTYSSLIRALGQEGKVEEAENLFAELERHGL--IPDEITYVKMIEAY-IMSGKVEHA 689
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L M C P++ T+ +++ L + L + + A L + C
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR-----LAALPDVVPNCSFGY---- 740
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ + +A + + + + +V+ + L+ L G EA LL M S+G+ D
Sbjct: 741 --QTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+N L+ L + V+ M + + M +GC + Y+E++ L R EA+
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M+ +P V LI GL
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGL 879
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
SV+ N +++ L +A + E + S G+ D N LL L N++ A V
Sbjct: 763 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 822
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
Q CE ++ Y L+ LC+ +EA E M + D V +LI GL +
Sbjct: 823 KHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRD 882
Query: 282 GKVEEGMKLLERMKGKGCYPNSASY 306
G + M+ L M+ + P+ Y
Sbjct: 883 GYKDLCMEFLHIMETRRYMPSFHIY 907
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 142/294 (48%), Gaps = 30/294 (10%)
Query: 89 PNEALYTLIINKLAQAKRF-DAI---EDIMQR----------IKVEKLCRFSDGFFYNVI 134
P+ YT +I L R DA+ +D+++R + +E +CR S GF
Sbjct: 141 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNS-GF----- 194
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+A+ L +M + C P++ T+N+++N + + + + G
Sbjct: 195 ----------EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGF 244
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ D LLKGLC + + + E ++NC PN T+ L+ C G VE A
Sbjct: 245 QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQ 304
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+LE+M G +T NI+I+ + KQG+V++ KLL M GC P++ SY VL GL
Sbjct: 305 VLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLC 364
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+R+ +AKEL+ M+ P+ V++ I LC + L+E ++++M + G
Sbjct: 365 RAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHG 418
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 133/272 (48%), Gaps = 8/272 (2%)
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGF---FYNVIKIYGNMA--GRISKAIETLFDMPS 156
A +R A ED+ +++ + DG Y K+ N+ GR S A L
Sbjct: 45 AHLRRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEG 104
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
V +N L+ YG + + V DA L++ LC+ G +
Sbjct: 105 SGSPVDVFAYN---TLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVAD 161
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A +LD+ ++ C+PNV TY+ L+ +C E+A +L+ M ++G + VT+N++I+
Sbjct: 162 ALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIIN 221
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G+ ++G+V++ +LL R+ G P++ SY +L GL KR+ + +EL M+ + P
Sbjct: 222 GMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMP 281
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ V++ LI C +VE VL++M + G
Sbjct: 282 NEVTFDMLIRFFCRGGMVERAIQVLEQMTEHG 313
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 157/350 (44%), Gaps = 51/350 (14%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++VL++ + K PN Y +IIN + + R D +++ R+ S GF + +
Sbjct: 198 MAVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLP-------SYGFQPDTV 249
Query: 135 K----IYGNMAGRISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+ G A + +E LF +M NC P+ TF++++ + +
Sbjct: 250 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQM 309
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG------- 242
+ G + NI++ +C+ G ++ AF +L++ C P+ +Y+T++ G
Sbjct: 310 TEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERW 369
Query: 243 ----------------------------LCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
LC+KG +E+A L+E+M G VT+N L
Sbjct: 370 DDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNAL 429
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
++G QG ++ ++L M C PN+ +Y +L GL + +R A ELV M+
Sbjct: 430 VNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDC 486
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
P+ V++ L+ C + +E+ ++++M++ G P + + ++ +T
Sbjct: 487 PPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGIT 536
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ +A G +D N L+ G C G+L+AA ++ P P+ TY+ L+ LC
Sbjct: 98 VLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVA---PDAYTYTPLIRVLC 154
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G V +A LL+ M G + VT+ +L+ + + E+ M +L+ M+ KGC PN
Sbjct: 155 DRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIV 214
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ G+ + R +A+EL+ R+ P VSY L+ GLC K +DV+ + +M
Sbjct: 215 TYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEM 274
Query: 365 VQQGFVP 371
+++ +P
Sbjct: 275 MEKNCMP 281
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 34/327 (10%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ YT ++ L +KR+D +E++ + +EK C ++ F +I+ + G + +
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEM-MEKNCMPNEVTFDMLIRFFCR-GGMVER 301
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
AI+ L M + C + N+V+N + + + G D +LK
Sbjct: 302 AIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLK 361
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG--- 263
GLC + A +L+E + NC PN T++T + LC+KG +E+A L+E+M G
Sbjct: 362 GLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTV 421
Query: 264 -----------------IDA------------DTVTFNILISGLRKQGKVEEGMKLLERM 294
ID+ +T+T+ L++GL +++ +L+ M
Sbjct: 422 GVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEM 481
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
C PN ++ ++ K EA ELV +M+ +P+ ++Y L+ G+
Sbjct: 482 LRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSS 541
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIVG 381
ED +L +V +G P + + I+G
Sbjct: 542 EDALELLHGLVSKGVSPDVITFSSIIG 568
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 139/288 (48%), Gaps = 13/288 (4%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NP+ YT ++ L +A+R+D ++++ + V C ++ F I I G I +A
Sbjct: 350 NPDTISYTTVLKGLCRAERWDDAKELLNEM-VRNNCPPNEVTFNTFICILCQ-KGLIEQA 407
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL----GVEIDACCLNI 203
I + M + C V T+N ++N +QG SA +L + +
Sbjct: 408 IMLIEQMSEHGCTVGVVTYNALVNGFC-------VQGHIDSALELFRSMPCKPNTITYTT 460
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC L+ A ++ E + +C PNV T++ L+ C+KG +EEA L+E+M G
Sbjct: 461 LLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHG 520
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ +T+N L+ G+ K E+ ++LL + KG P+ ++ ++ L + R EA
Sbjct: 521 CTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAV 580
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L + M P V Y K++ GLC + +++ MV G +P
Sbjct: 581 QLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMP 628
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 142/306 (46%), Gaps = 6/306 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I VL Q ++ N L ++IN + + R D ++ + C D Y +
Sbjct: 303 IQVLEQMTEHGCAT-NTTLCNIVINSICKQGRVDDAFKLLNDMGSYG-CN-PDTISYTTV 359
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
A R A E L +M NC P+ TFN + +L L + + ++ G
Sbjct: 360 LKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGC 419
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ N L+ G C G++++A + P C+PN TY+TL+ GLC ++ A
Sbjct: 420 TVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAE 476
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L+ M + VTFN+L+S ++G +EE ++L+E+M GC PN +Y +L G+
Sbjct: 477 LVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGIT 536
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+A EL+ ++ + +SP +++ +I L + +E+ + + G P+
Sbjct: 537 KDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAV 596
Query: 375 MWREIV 380
++ +I+
Sbjct: 597 VYNKIL 602
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 150/328 (45%), Gaps = 7/328 (2%)
Query: 43 SDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLA 102
+D +Y N D +S T VLK +LN+ R + PNE + I L
Sbjct: 342 NDMGSYGCN-PDTISYTTVLKGLCRAERWDDAKELLNEMV-RNNCPPNEVTFNTFICILC 399
Query: 103 QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPS 162
Q + +++++ E C YN + + G I A+E MP C P+
Sbjct: 400 QKGLIEQAIMLIEQMS-EHGCTVG-VVTYNALVNGFCVQGHIDSALELFRSMP---CKPN 454
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
T+ +L L +A+ + + + N+L+ C+ G LE A +++
Sbjct: 455 TITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVE 514
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
+ + C PN+ TY+TL+ G+ + + E+A LL + S+G+ D +TF+ +I L K+
Sbjct: 515 QMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKED 574
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
++EE ++L ++ G P + Y ++L GL + A + M+ P+ +Y
Sbjct: 575 RIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYI 634
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
LI GL ++ L+++ +L + +G +
Sbjct: 635 ILIEGLAHEGLLKEAQDLLSVLCSRGVL 662
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P+V + L+ LC +G +A +L E G D +N L++G + G ++ +L
Sbjct: 74 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 133
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+ M P++ +Y ++ L D+ R +A L+ M+ P+ V+Y L+ +C
Sbjct: 134 IGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E VL +M +G P + + I+
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVII 220
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 136/285 (47%), Gaps = 2/285 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P +T +IN L + F ++ + V K C+ D + YN I G + A
Sbjct: 161 PTIVTFTTLINGLCKVGEFAQAVELFDDM-VAKGCQ-PDVYTYNTIINGLCKIGETAAAA 218
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M C P++ T++ +++ L +L E I++ G+ D L++GL
Sbjct: 219 GLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGL 278
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ + A +L+E N P++ T++ L+ C++G V EA G+L+ M G++ +
Sbjct: 279 CKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNV 338
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ L+ G V E KL M KGC PN SY ++ G KR EA +L
Sbjct: 339 VTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNE 398
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
MI + ++P+ VSY LIHG C + + + + M G +P +
Sbjct: 399 MIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDL 443
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P++ T ++ +N + + KLG++ L+ GLC+ G A +
Sbjct: 126 PNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVEL 185
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+ + C+P+V TY+T+++GLC+ G A GLL++ME G + VT++ LI L +
Sbjct: 186 FDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCR 245
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
V E + + MK KG P+ +Y ++ GL R+ EA L+ M + P V+
Sbjct: 246 DRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVT 305
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ L+ C + V + VLK M + G P + + ++
Sbjct: 306 FNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLM 345
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 35/264 (13%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ L + P++ TF ++N L + + ++ G + D N
Sbjct: 143 RVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYN 202
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++ GLC+ G AA +L + + C+PN+ TYSTL+ LC V EA + M+++
Sbjct: 203 TIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAK 262
Query: 263 GID-----------------------------------ADTVTFNILISGLRKQGKVEEG 287
GI D VTFN+L+ K+GKV E
Sbjct: 263 GISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEA 322
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+ +L+ M G PN +Y ++YG EA++L MI + P+ SY LI+G
Sbjct: 323 LGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILING 382
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVP 371
C K +++ + +M+ QG P
Sbjct: 383 YCKAKRIDEAMQLFNEMIHQGLTP 406
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y+ +I+ L + + + DI +K + + D F Y + R +A
Sbjct: 231 PNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGIS--PDIFTYTSLIQGLCKFSRWKEAS 288
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +M S N P + TFN++++ E G+ + ++GVE + + L+ G
Sbjct: 289 ALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGY 348
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
++ A + + C+PN+ +Y+ L++G C+ ++EA L M +G+ +
Sbjct: 349 SLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNN 408
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V++N LI G + GK+ E L M G P+ +Y +L G + +A L
Sbjct: 409 VSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRA 468
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + P+ V Y L+H +C +D + ++ QG P + ++ I+
Sbjct: 469 MQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTII 520
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 147/324 (45%), Gaps = 9/324 (2%)
Query: 81 YSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
Y K K +P+ YT +I L + R+ ++ ++ L D +NV+
Sbjct: 258 YMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLN--EMTSLNIMPDIVTFNVLVDTFCK 315
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEID 197
G++S+A+ L M P+V T++ +L+ L+ ++ + ++ G + +
Sbjct: 316 EGKVSEALGVLKTMTEMGVEPNVVTYS---SLMYGYSLWTDVVEARKLFHVMITKGCKPN 372
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
NIL+ G C+ ++ A + +E Q PN +Y+TL+HG C+ G + EA L
Sbjct: 373 IFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR 432
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M + G D T++IL+ G KQG + + +L M+ PN Y +++ +
Sbjct: 433 NMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSG 492
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+A++L + + + P Y +I+GLC + L+++ + M G P +
Sbjct: 493 NHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYN 552
Query: 378 EIV-GCVTFGKDNRNRVYVTETVD 400
I+ G + ++R + V E D
Sbjct: 553 VIIRGLLQHKDESRALLLVGEMRD 576
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 118/248 (47%), Gaps = 3/248 (1%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS-AKLYGEIQGIYTSAAKLGVEIDACCLN 202
I A+ + M P + F +L+ +V + Y + + +G+ + L+
Sbjct: 73 IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I + C+ ++ F VL + K +P + T++TL++GLC+ G +A L + M ++
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D T+N +I+GL K G+ LL++M+ GC PN +Y ++ L + EA
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
++ M + +SP +Y LI GLC ++ +L +M +P + + +V
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVD- 311
Query: 383 VTFGKDNR 390
TF K+ +
Sbjct: 312 -TFCKEGK 318
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + C P++ ++N+++N AK E ++ G+ + N L+ G C+ G
Sbjct: 364 MITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGK 423
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L A + P++ TYS L+ G C++G + +AF L M+S + + V + I
Sbjct: 424 LREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTI 483
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ + K G ++ KL + +G P+ Y ++ GL + EA E M +
Sbjct: 484 LVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADG 543
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
P +SY +I GL K ++ +M +GF+
Sbjct: 544 CPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFI 580
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 108/215 (50%), Gaps = 4/215 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K PN Y ++IN +AKR D + + + L + YN + I+G G+
Sbjct: 367 KGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLT--PNNVSYNTL-IHGFCQLGK 423
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A + +M + P + T++++L+ G+ ++ + ++ + I
Sbjct: 424 LREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTI 483
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ +C++GN + A + E Q +P+V+ Y+T+++GLC++G ++EA ME++G
Sbjct: 484 LVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADG 543
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
D +++N++I GL + + L+ M+ +G
Sbjct: 544 CPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRG 578
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/180 (18%), Positives = 73/180 (40%), Gaps = 2/180 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN Y +I+ Q + +D+ + + D F Y+++ G + KA
Sbjct: 405 TPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNG--NLPDLFTYSILLDGFCKQGYLGKA 462
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
M S P++ + ++++ + + + + + +++ G++ ++ G
Sbjct: 463 FRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIING 522
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G L+ A C P+ +Y+ ++ GL + + A L+ M G AD
Sbjct: 523 LCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 167/336 (49%), Gaps = 8/336 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
SP+++L + D S +S+ S + +Y+ + +++ ++ +LA+A FD++ +++
Sbjct: 57 FSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLR 116
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM--PSYNCWPSVKTFNLVLNLL 173
++ K+ + F ++ Y + + I LF + + P + +N+ L+LL
Sbjct: 117 QMHSSKI-PVDESTFLIFLETYAT-SHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLL 174
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
V A ++ +++ V D NIL++ LC+ L A +L++ P P+
Sbjct: 175 VKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDE 234
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+T++TLM G E+ +VE A + E M G + +V+ N+L++GL K+G++EE ++ +
Sbjct: 235 KTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFI-- 292
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+ +G P+ ++ ++ GL + E++ M+ + +Y LI GLC
Sbjct: 293 YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGE 352
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDN 389
+++ +L MV + P + ++G T K+N
Sbjct: 353 IDEAVEILHHMVSRDCEPNTVTYNTLIG--TLCKEN 386
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 147/302 (48%), Gaps = 8/302 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ + + P++ + ++N L + ++M +EK D + YN + G
Sbjct: 294 EEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMD-FMLEKGFEL-DVYTYNSLISGLCKLG 351
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS---AKLYGEIQGIYTSAAKLGVEIDAC 199
I +A+E L M S +C P+ T+N ++ L + E+ + TS GV D C
Sbjct: 352 EIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSK---GVLPDVC 408
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L++GLC N E A + +E ++ C+P+ TYS L+ LC + ++EA LL+ M
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E G + V +N LI GL K +V + + ++M+ G +S +Y ++ GL KR
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRV 528
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA +L+ +MI E + P +Y ++ C Q ++ +++ M G P + + +
Sbjct: 529 EEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTL 588
Query: 380 VG 381
+G
Sbjct: 589 IG 590
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 143/305 (46%), Gaps = 14/305 (4%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
LR I ++ + Y R P+E +T ++ + + I + + VE C +
Sbjct: 214 QLRPAILMLEDMPNYGLR----PDEKTFTTLMQGFIEEADVEGALRI-KELMVESGCELT 268
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI-QGI 185
NV+ GRI +A+ +++ + P TFN ++N L G I QG+
Sbjct: 269 -SVSVNVLVNGLCKEGRIEEALRFIYEEEGF--CPDQVTFNALVNGLCRT---GHIKQGL 322
Query: 186 YTSAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
L G E+D N L+ GLC+ G ++ A +L ++CEPN TY+TL+ L
Sbjct: 323 EMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTL 382
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C++ +VE A L + S+G+ D TFN LI GL E M+L E MK KGC P+
Sbjct: 383 CKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDE 442
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y ++ L ++R EA L+ M + + V Y LI GLC V D + + +
Sbjct: 443 FTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQ 502
Query: 364 MVQQG 368
M G
Sbjct: 503 MEMLG 507
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 144/285 (50%), Gaps = 5/285 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +I L + ++ + +K EK C D F Y+++ R+ +A+
Sbjct: 405 PDVCTFNSLIQGLCLTSNREIAMELFEEMK-EKGCD-PDEFTYSILIESLCSERRLKEAL 462
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +M C +V +N +++ L G+ + I+ LGV + N L+ GL
Sbjct: 463 MLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGL 522
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++ +E A ++D+ + +P+ TY+T++ C++G+++ A +++ M G + D
Sbjct: 523 CKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDI 582
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ LI GL K G+V+ KLL ++ KG +Y V+ L +KR EA L
Sbjct: 583 VTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFRE 642
Query: 329 MICERMSPSFVSYKKLIHGLCN--QKLVEDVDWVLKKMVQQGFVP 371
M+ + P ++YK + GLCN + E VD+ + +M+++G +P
Sbjct: 643 MMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTV-EMLEKGILP 686
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 5/288 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K +P+E Y+++I L +R +++ +++ R + YN +
Sbjct: 434 KEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCAR--NVVVYNTLIDGLCKNN 491
Query: 143 RISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ A E +FD M S T+N ++N L +K E + G++ D
Sbjct: 492 RVGDA-EDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTY 550
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+LK C+ G+++ A ++ CEP++ TY TL+ GLC+ G V+ A LL ++
Sbjct: 551 TTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQM 610
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK-RFP 320
+G+ +N +I L K+ + +E M+L M KG P+ +Y+ V GL +
Sbjct: 611 KGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQ 670
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
EA + M+ + + P F S+ L GLC+ + + + ++ ++++G
Sbjct: 671 EAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKG 718
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 6/244 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y +IN L ++KR + +M ++ +E L D F Y + Y G I +A + + +
Sbjct: 515 YNTLINGLCKSKRVEEAAQLMDQMIMEGL--KPDKFTYTTMLKYFCQQGDIKRAADIVQN 572
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M C P + T+ ++ L A + S G+ + N +++ LC+
Sbjct: 573 MTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKR 632
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN-VEEAFGLLERMESEGIDADTVTFN 272
+ A + E ++ P+V TY + GLC G ++EA M +GI + +F
Sbjct: 633 TKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFG 692
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
L GL + ++L+ + KG + S S ++ G L ++F +A +G I +
Sbjct: 693 FLAEGLCSLSMEDTLIQLINMVMEKGRF--SQSETSIIRGFLKIQKFNDALANLG-AILD 749
Query: 333 RMSP 336
R P
Sbjct: 750 RKKP 753
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 147/310 (47%), Gaps = 6/310 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISK 146
NP+ + ++ A++ + ++ Q + VE + D Y+++ I+G G++ +
Sbjct: 42 NPDVFAFNGVMQGFARSNNMEKAREVYQHM-VESGYK-PDNVSYHIL-IHGLAKIGKLDE 98
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
+++ L +M PS++ ++ ++ L A+ ++ + G D L+
Sbjct: 99 SLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELIL 158
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ G ++ A + PK C+PNV Y+ L+HGLC G +E+A L M+S
Sbjct: 159 GLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSP 218
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D VT+N L+ + K +VEEG KL E M+ G PN ++ +++GL +A E+
Sbjct: 219 DVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF 278
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVT 384
G M+ P+ +Y LI GLC + V + +KM Q P + ++ C
Sbjct: 279 GSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 338
Query: 385 FGKDNRNRVY 394
D ++Y
Sbjct: 339 GSMDEAEKLY 348
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 139/312 (44%), Gaps = 39/312 (12%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+ ++ LA+A+R D + + + FY +I + AG++ A
Sbjct: 112 TPSMQAYSSLVRALAKARRVDHASSLFDEM-IRGGHHPDRLMFYELI-LGLCQAGKVKDA 169
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E MP + C P+V +N +LL G
Sbjct: 170 SERFKQMPKHGCQPNVPVYN-----------------------------------VLLHG 194
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC +G LE A + E +C P+V TY+TL+ +C+ VEE L E M + G +
Sbjct: 195 LCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPN 254
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+TF+ LI GL + G++E+ +++ M GC PN +Y ++ GL ++ +A+EL
Sbjct: 255 VITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFE 314
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV-QQGFVPRMGMWREIV-GCVTF 385
+M + P V+Y LI G C + +++ + + ++M G P + + ++ G
Sbjct: 315 KMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKL 374
Query: 386 GKDNRNRVYVTE 397
GK R V E
Sbjct: 375 GKLGRANELVAE 386
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 110/232 (47%)
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M + C P V FN V+ + + + +Y + G + D +IL+ GL
Sbjct: 31 KVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGL 90
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G L+ + +L E + P+++ YS+L+ L + V+ A L + M G D
Sbjct: 91 AKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDR 150
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ F LI GL + GKV++ + ++M GC PN Y +L+GL + +A L
Sbjct: 151 LMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAE 210
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M SP V+Y L+ +C + VE+ + + M G+VP + + ++
Sbjct: 211 MKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLI 262
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 143/331 (43%), Gaps = 40/331 (12%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK-VEKLCRFSDGFFYNVIKIYGNMAG 142
R ++P+ ++ +I L QA + ++D +R K + K + YNV+ +G
Sbjct: 143 RGGHHPDRLMFYELILGLCQAGK---VKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSG 199
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A +M S++C P V T+N +L+ + A+ E ++ + G + +
Sbjct: 200 QLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFS 259
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM--- 259
L+ GLC G LE A V + C+PN TY+TL+ GLC V +A L E+M
Sbjct: 260 TLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQA 319
Query: 260 -----------------------ESE----------GIDADTVTFNILISGLRKQGKVEE 286
E+E G+ VTFN LI G K GK+
Sbjct: 320 CIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGR 379
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+L+ M KG +S +Y+ ++ GL + EA E+ +M ++ VS +
Sbjct: 380 ANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVG 439
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
GLC ++ V + + G VP +R
Sbjct: 440 GLCKTGNIDQAYAVFEATRKSGAVPNPETFR 470
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++K L + E ++ VL+E C P+V ++ +M G N+E+A + + M G
Sbjct: 16 IIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESG 75
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D V+++ILI GL K GK++E +K+L M +G P+ +Y ++ L +R A
Sbjct: 76 YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHAS 135
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
L MI P + + +LI GLC V+D K+M + G P + ++
Sbjct: 136 SLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 3/210 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN+ YT +I+ L +A++ ++ + K+ + C D YN + G + +A
Sbjct: 288 PNKYTYTTLISGLCRAEKVIQARELFE--KMTQACIPPDAVAYNSLIAGYCKRGSMDEAE 345
Query: 149 ETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +M P++ TFN +++ G + G+ D+C IL+ G
Sbjct: 346 KLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAG 405
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L L+ A V + ++ + + + + GLC+ GN+++A+ + E G +
Sbjct: 406 LSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPN 465
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGK 297
TF IL L K G+VE+ KL+E K +
Sbjct: 466 PETFRILSESLIKLGRVEDAQKLMEPAKAR 495
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 154/306 (50%), Gaps = 2/306 (0%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+S++N +K + P Y I++ + + K+ I + + + VE + + YN++
Sbjct: 152 LSIVN-LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVS-PNVYTYNIL 209
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
AG + + +M C P+V T+N +++ + GE + A G+
Sbjct: 210 IRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGL 269
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ N+++ GLC G ++ +L+E K+ P+ T++TL++G C GN +A
Sbjct: 270 NPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALV 329
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L M G+ + VT+ LI+ + K G + M+ L++M+ +G +PN +Y ++ G
Sbjct: 330 LHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFS 389
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ +A +++ M+ +P+ ++Y LI+G C +ED +L++M+++GF+P +
Sbjct: 390 QQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVV 449
Query: 375 MWREIV 380
+ I+
Sbjct: 450 SYSTII 455
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 139/272 (51%), Gaps = 3/272 (1%)
Query: 111 EDIMQRIKVEKL-CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLV 169
ED+ Q +K C+ S F V+K + I+KA+ + SY P V ++N +
Sbjct: 115 EDLFQCLKNSYYQCKSSSAVFDLVVKSCARV-NLINKALSIVNLAKSYGFMPGVLSYNAI 173
Query: 170 LNLLVSAKLYGEI-QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
L+ ++ K +I +GI+ + GV + NIL++G C GNLE E +
Sbjct: 174 LDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNG 233
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
C PNV TY+T++ C+ + EAF LL M +G++ + +++N++I+GL ++G+++E
Sbjct: 234 CLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETS 293
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
++LE M + P+ ++ ++ G + F +A L M+ +SP+ V+Y LI+ +
Sbjct: 294 EILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSM 353
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C + L +M +G P + ++
Sbjct: 354 CKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLI 385
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 137/283 (48%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y II+ + ++ +++ + ++ L + YNV+ G++ +
Sbjct: 236 PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLN--PNLISYNVVINGLCREGQMKETS 293
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M P TFN ++N + + + ++ K G+ + L+ +
Sbjct: 294 EILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSM 353
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ GNL A LD+ + PN RTY+TL+ G ++G +++A+ +++ M G
Sbjct: 354 CKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTI 413
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+N LI+G G++E+ LL+ M +G P+ SY ++ G + +A +L
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + +SP +Y LI GLC Q+ + +V + ++M+ G P
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP 516
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 147/312 (47%), Gaps = 12/312 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGR 143
K NPN Y ++IN L + + +I++ + + D +N +I Y N+ G
Sbjct: 267 KGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV--PDRVTFNTLINGYCNV-GN 323
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A+ +M P+V T+ ++N + A G+ +
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G + G L+ A+ ++ E + P + TY+ L++G C G +E+A GLL+ M G
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D V+++ +ISG + ++E+ +L M KG P+ A+Y ++ GL ++R E
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK---KMVQQGFVPRMGMWREIV 380
+L M+ + P V+Y LI+ C + D+D L+ +M+Q+GF P + + ++
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEG---DLDKALRLHDEMIQKGFSPDIVTYNVLI 560
Query: 381 GCVTFGKDNRNR 392
F K +R +
Sbjct: 561 N--GFNKQSRTK 570
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 145/308 (47%), Gaps = 17/308 (5%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL+ + +PN YT +IN + +A + + + +++ L +G Y +
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL--HPNGRTYTTLID 386
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ G + +A + + +M P++ T+N ++N + G+ + G
Sbjct: 387 GFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIP 446
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D + ++ G C N LE AF + E + P+V TYS+L+ GLC++ + E L
Sbjct: 447 DVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLF 506
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ M S G+ D VT+ LI+ +G +++ ++L + M KG P+ +Y ++ G +
Sbjct: 507 QEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQ 566
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLI---------------HGLCNQKLVEDVDWVL 361
R EAK L+ +++ E P+ ++Y LI G C + L+ + D VL
Sbjct: 567 SRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVL 626
Query: 362 KKMVQQGF 369
+ M+Q+G+
Sbjct: 627 ESMLQKGY 634
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+I +A + L M P++ ++N+V+N L E I +K D N
Sbjct: 253 KIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFN 312
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C GN A + E K PNV TY+TL++ +C+ GN+ A L++M
Sbjct: 313 TLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDR 372
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + T+ LI G +QG +++ ++++ M G P +Y ++ G R +A
Sbjct: 373 GLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDA 432
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ MI P VSY +I G C + +E + +MV +G P + + ++
Sbjct: 433 SGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 132/342 (38%), Gaps = 66/342 (19%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG---- 142
+ P Y +IN R + ++Q + +E+ GF +V+ ++G
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEM-IER------GFIPDVVSYSTIISGFCRN 461
Query: 143 -RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ KA + +M + P V T++ ++ L + GE+ ++ LG+ D
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL---------------------- 239
L+ C G+L+ A + DE ++ P++ TY+ L
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581
Query: 240 ----------------------------MHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
M G C KG + EA +LE M +G + +
Sbjct: 582 EESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVY 641
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI- 330
N++I G K G +E+ L + M G P+S + + L + + E +L+ +
Sbjct: 642 NVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLK 701
Query: 331 -CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
C R++ + ++ K LI + ++ V VLK M G +P
Sbjct: 702 SC-RITEAALA-KVLIGINSKEGNMDAVFNVLKDMALSGLLP 741
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 18/248 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +P+ A Y+ +I L + +R + D+ Q + L + + ++I Y + G +
Sbjct: 477 KGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP-DEVTYTSLINAYC-IEGDL 534
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE-----IQGIYTSAAKLGVEIDAC 199
KA+ +M P + T+N+++N E ++ +Y + + +
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594
Query: 200 ---CLNI-------LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
C N+ L+KG C G + A VL+ ++ + N Y+ ++HG + GN+
Sbjct: 595 IDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNI 654
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E+A+ L + M G +VT L L +GK E +LL+ K C A+ +V
Sbjct: 655 EKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTL-KSCRITEAALAKV 713
Query: 310 LYGLLDKK 317
L G+ K+
Sbjct: 714 LIGINSKE 721
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 148/310 (47%), Gaps = 11/310 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK--IYGNM 140
K+K PN YT +I+ ++ + M R V + YN + + NM
Sbjct: 360 KKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGV-----VPNTVTYNALMNVLMENM 414
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
I A+ M + C P+ ++N ++ + + + T+ K
Sbjct: 415 --EIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVT 472
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI++KG C++G+ + A VL+ C+P+ +Y+ L+ G C+ +E A G+ M
Sbjct: 473 YNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMM 532
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ + VT+ LISG K K++ ++LERMK GC PN +Y +++GL + F
Sbjct: 533 DRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFS 592
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A+EL M+ E++SP V+Y +I+GLCN + + KMV+ G +P + + ++
Sbjct: 593 GAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLI 652
Query: 381 GCVTFGKDNR 390
G++ R
Sbjct: 653 Q--ALGQEGR 660
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 150/331 (45%), Gaps = 6/331 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + T ++ + RD S + N+ + + PN A Y+ +IN L + R + D
Sbjct: 262 DTFTYTSMILGYCRNRDLDSAFEIFNRMDE-EGCEPNAATYSTLINGLCNSGRVNEALDF 320
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ + + F ++ + GRI A + DM C P+V T+ +L+
Sbjct: 321 ISEMTRHGVLPTVHTFTAPIVALCD--MGRIEDAWKIFIDMKKKGCKPNVYTYT---SLI 375
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
++ G++ ++ GV + N L+ L EN +++A V + K C PN
Sbjct: 376 SGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNT 435
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+Y+ L+ G C G+ E+A +L M VT+NI+I G G + +++LE
Sbjct: 436 SSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLEL 495
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
MK GC P+ SY E++ G + A + M+ + P+ V+Y LI G C +
Sbjct: 496 MKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEK 555
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
++ +L++M + G P + + ++ +T
Sbjct: 556 LDCAARMLERMKRSGCRPNVQTYNVLIHGLT 586
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 144/308 (46%), Gaps = 9/308 (2%)
Query: 76 SVLNQYSK--RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+V+++Y + R+ PN +Y +IN L + E I+ KV K D F Y
Sbjct: 211 TVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIIN--KVFKSGMKPDTFTYTS 268
Query: 134 IKIYGNMAGR-ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ I G R + A E M C P+ T++ ++N L ++ E + +
Sbjct: 269 M-ILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRH 327
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GV + LC+ G +E A+ + + K+ C+PNV TY++L+ G + A
Sbjct: 328 GVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMA 384
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
GL RM +G+ +TVT+N L++ L + +++ + + M GC PN++SY E++ G
Sbjct: 385 IGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRG 444
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+A ++ M+ R +P+ V+Y +I G C+ + VL+ M G P
Sbjct: 445 YCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPD 504
Query: 373 MGMWREIV 380
+ E++
Sbjct: 505 EWSYTELI 512
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 121/269 (44%), Gaps = 4/269 (1%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F Y + I N S ++ + P++ +N V+N L + + I
Sbjct: 194 FTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINK 253
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
K G++ D ++ G C N +L++AF + + ++ CEPN TYSTL++GLC G
Sbjct: 254 VFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGR 313
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V EA + M G+ TF I L G++E+ K+ MK KGC PN +Y
Sbjct: 314 VNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTS 373
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G ++ A L RM + + P+ V+Y L++ L ++ V M + G
Sbjct: 374 LISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHG 430
Query: 369 FVPRMGMWREIV-GCVTFGKDNRNRVYVT 396
+P + E++ G T G + +T
Sbjct: 431 CLPNTSSYNELIRGYCTIGDTEKAMSMLT 459
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 2/251 (0%)
Query: 131 YNVI-KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN+I K Y + +G AI L M + C P ++ +++ G++
Sbjct: 473 YNIIIKGYCD-SGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEM 531
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G+ + L+ G C++ L+ A +L+ + C PNV+TY+ L+HGL ++ N
Sbjct: 532 MDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNF 591
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
A L + M E I D VT++ +I+GL G + +++ +M GC PN +Y +
Sbjct: 592 SGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSL 651
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ L + R EA+E+ + + + P V+Y K+I V+ L +M+ G
Sbjct: 652 IQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGC 711
Query: 370 VPRMGMWREIV 380
P + + ++
Sbjct: 712 QPTLQTYDVLI 722
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 3/253 (1%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
++K + + D I VL + K P+E YT +I+ + + + + +
Sbjct: 476 IIKGYCDSGDTDVAIRVL-ELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDR 534
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
LC ++ + +I Y ++ A L M C P+V+T+N++++ L +
Sbjct: 535 GLCP-NEVTYTALISGYCK-DEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFS 592
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ + + + D + ++ GLC NG + A + ++ K C PN+ TYS+L+
Sbjct: 593 GAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLI 652
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
L ++G VEEA + ++ +G+ D VT+ +I GKV+ L M GC
Sbjct: 653 QALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQ 712
Query: 301 PNSASYQEVLYGL 313
P +Y ++ GL
Sbjct: 713 PTLQTYDVLIKGL 725
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 130/320 (40%), Gaps = 24/320 (7%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
KR PN Y ++I+ L + F E++ + + EK+ D Y+ + G
Sbjct: 567 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKIS--PDVVTYSTVINGLCNNG 624
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
I A+E M + C P++ T++ ++ L E + +++ K G+ D
Sbjct: 625 AIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYV 684
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL-----LE 257
+++ +G ++ AF L E C+P ++TY L+ GL + + L
Sbjct: 685 KMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTS 744
Query: 258 RMESEGIDADTVT-----------------FNILISGLRKQGKVEEGMKLLERMKGKGCY 300
+ + I+ D ++ ++ L+S L + G+ E L M +
Sbjct: 745 TFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQC 804
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
PN +Y+ L LL + A ++ M +R YK+LI LC ++ +V
Sbjct: 805 PNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFV 864
Query: 361 LKKMVQQGFVPRMGMWREIV 380
+KM+ + +W ++
Sbjct: 865 FEKMLSRALNADEIVWTILI 884
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++K + A LD F ++ + + TY+TL+ L + ++ EG
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + + +N +I+ L K G V + ++ ++ G P++ +Y ++ G + A
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E+ RM E P+ +Y LI+GLCN V + + +M + G +P
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLP 331
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 117/264 (44%), Gaps = 23/264 (8%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y+ +I L Q R + E++ +K + L D Y + M+G++ +A
Sbjct: 643 PNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGL--IPDEVTYVKMIEVCVMSGKVDRAF 700
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE---IDACCLNILL 205
+ L +M + C P+++T+++++ L + +Y ++ + +A+ + I+ +++L
Sbjct: 701 DFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLS 760
Query: 206 KGLCENGNLEAAFYVLD-EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L E LD E +Q Y L+ L G EA L M S+
Sbjct: 761 SKLAE----------LDFELSRQ-------LYDALLSRLSRSGRWFEANNLYRSMVSQSQ 803
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ T+ + L + KV+ M + + M + C + Y+E++ L R EA+
Sbjct: 804 CPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARF 863
Query: 325 LVGRMICERMSPSFVSYKKLIHGL 348
+ +M+ ++ + + LI+GL
Sbjct: 864 VFEKMLSRALNADEIVWTILINGL 887
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 60/153 (39%), Gaps = 1/153 (0%)
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
K + +A L+ G T+ L+ L K M ++ +G PN
Sbjct: 171 KAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLI 230
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y V+ L +A+ ++ ++ M P +Y +I G C + ++ + +M
Sbjct: 231 YNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMD 290
Query: 366 QQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTE 397
++G P + ++ G G+ N +++E
Sbjct: 291 EEGCEPNAATYSTLINGLCNSGRVNEALDFISE 323
>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
Length = 418
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 156/322 (48%), Gaps = 42/322 (13%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS--DGFFYNVIKIYGNMAGRISKAIETL 151
Y LII KL +++ F +E I+ +++ E RFS + F NVI YG A +AI+T
Sbjct: 46 YDLIITKLGRSRMFHEMEQILSQLRRET--RFSPKEIIFCNVISFYGR-ARLPDRAIQTF 102
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+P + C +VK+ N +LN L++ K + + GI + K + C NIL+ C +
Sbjct: 103 ESIPEFRCQRTVKSLNSLLNALLNCKEFEKFDGILSGIDKFATP-NVCTYNILINACCLS 161
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE-------------------- 251
G L A+ V DE +++ PNV T+ TL+ GLC ++E
Sbjct: 162 GRLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRLDEASRLKEDMVKVFNVKPNAFV 221
Query: 252 ----------------AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
AF L + M + + D+ ++ LI+ L K G+ +E +LE M+
Sbjct: 222 YASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMR 281
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
GC P++ +Y ++ G ++K F A ++ M+ + P +SY +I GLC +
Sbjct: 282 ENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWR 341
Query: 356 DVDWVLKKMVQQGFVPRMGMWR 377
+ + + + M ++G P +G +R
Sbjct: 342 EANDLFEDMPRRGCTPDVGSYR 363
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 131/279 (46%), Gaps = 29/279 (10%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG----- 142
PN Y ++IN + R ++ + + +C NV+ ++G
Sbjct: 145 TPNVCTYNILINACCLSGRLGDAWNVFDEMLRKHVCP-------NVVTFGTLISGLCRDS 197
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI--YTSAAKLGVE----- 195
R+ +A DM VK FN+ N V A L + + + A +L E
Sbjct: 198 RLDEASRLKEDM--------VKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANK 249
Query: 196 --IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+D+ + L+ L + G + F VL+E + C+P+ TY+ ++ G C + + E A+
Sbjct: 250 LRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAY 309
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
G+LE M +G D +++N++ISGL K+GK E L E M +GC P+ SY+ + GL
Sbjct: 310 GVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGL 369
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+ +F EA ++ M+ + +P S K + LC+ +
Sbjct: 370 CEGMQFNEAAFILDEMVFKGYAPKSASXTKFVEALCSGR 408
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 173/367 (47%), Gaps = 15/367 (4%)
Query: 12 RQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHK----DWLSPTEVLKIFSN 67
RQ QSL T K F + S ++ +S H + K D + T+++K F
Sbjct: 78 RQQHSQSLGFRDTQMLK-IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFT 136
Query: 68 LRD---PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
LR+ + V+ +L ++ + P+ Y +IN + R D ++ R++ +
Sbjct: 137 LRNIPKAVRVMEILEKFGQ-----PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS- 190
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
D YN++ G++ A++ L + S NC P+V T+ +++ + E
Sbjct: 191 -PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALK 249
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ G++ D N +++G+C+ G ++ AF ++ + EP+V +Y+ L+ L
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALL 309
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+G EE L+ +M SE D + VT++ILI+ L + GK+EE M LL+ MK KG P++
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
SY ++ + R A E + MI + P V+Y ++ LC + + K+
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 365 VQQGFVP 371
+ G P
Sbjct: 430 GEVGCSP 436
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 2/243 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y+++I L + + + ++++ +K + L D + Y+ + GR+ A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT--PDAYSYDPLIAAFCREGRLDVA 387
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
IE L M S C P + +N VL L + I+ ++G ++ N +
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L +G+ A +++ E +P+ TY++++ LC +G V+EAF LL M S
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+NI++ G K ++E+ + +LE M G GC PN +Y ++ G+ EA EL
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAN 567
Query: 328 RMI 330
++
Sbjct: 568 DLV 570
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 128/298 (42%), Gaps = 2/298 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y II + + D ++++ ++++ D YN++ G+ +
Sbjct: 261 PDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG--SEPDVISYNILLRALLNQGKWEEGE 318
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + M S C P+V T+++++ L E + + G+ DA + L+
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G L+ A L+ C P++ Y+T++ LC+ G ++A + ++ G ++
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++N + S L G + ++ M G P+ +Y ++ L + EA EL+
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
M PS V+Y ++ G C +ED VL+ MV G P + ++ + F
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 556
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +GN + ++L+ ++ P+V + L+ G N+ +A ++E +E G D
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+N LI+G K ++++ ++L+RM+ K P++ +Y ++ L + + A +++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ + P+ ++Y LI + V++ ++ +M+ +G P M + I+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS-PSF 338
+ G E + LLE M KG P+ +++ G + P+A ++ I E+ P
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME--ILEKFGQPDV 158
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+Y LI+G C ++D VL +M + F P + ++G
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIG 201
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 144/292 (49%), Gaps = 5/292 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P++A+Y +I+ ++AK F + + V+ C + + N++ A R A+
Sbjct: 75 PDDAIYNALISGYSKAKDFGQAFKFLAEM-VKNHCLPTVVTYTNIVDGLCK-AERTRDAV 132
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M C P++ T+N+++ L + E + + A G D N +KGL
Sbjct: 133 KLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGL 192
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ ++ A L P P+V +Y+T+++GLC+ G+++ A +L+ M + G D
Sbjct: 193 CKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDV 249
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ LI G K G+VE M LL+ M GC PN +Y +L L +A++++
Sbjct: 250 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 309
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M +P VSY I GLC + V+ V +MV++G P + ++
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLI 361
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 121/252 (48%), Gaps = 3/252 (1%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F YN + + R KA +M +C P TF ++L L + + + +
Sbjct: 8 FTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGR 67
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
++G D N L+ G + + AF L E K +C P V TY+ ++ GLC+
Sbjct: 68 MKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAER 127
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+A LL+ M +G + T+N+++ GL ++ K++E K+LE M +G +P+ +Y
Sbjct: 128 TRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 187
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ GL R EA++ + RM ++P VSY +I+GLC ++ +L M +G
Sbjct: 188 FIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRG 244
Query: 369 FVPRMGMWREIV 380
P + + ++
Sbjct: 245 CTPDVVTYSSLI 256
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 5/295 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y N Y ++ +L + R D + Q + ++K C+ D F + ++ + ++ K
Sbjct: 3 YEHNVFTYNKLLLQLTREHRHDKASAVFQEM-IDKSCQ-PDAFTFAILLRGLCRSNQLEK 60
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A + L M C P +N +++ AK +G+ K ++
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ A +LDE + C PN+ TY+ ++ GLCE+ ++EA +LE M G
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D VT+N I GL K +V+E K L RM P+ SY V+ GL A ++
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRML 237
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
M +P V+Y LI G C VE +L M++ G P M + ++G
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLG 292
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 158/359 (44%), Gaps = 32/359 (8%)
Query: 6 HFARNHRQ----SIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEV 61
R HR ++ Q + S TFA+ + A KL +
Sbjct: 16 QLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGR-------- 67
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKR 106
+K + D ++++ YSK KD+ P YT I++ L +A+R
Sbjct: 68 MKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAER 127
Query: 107 FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF 166
++ ++ +K C + + YNVI ++ +A + L +M +P V T+
Sbjct: 128 TRDAVKLLDEMR-DKGCS-PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
N + L E + A++ V D ++ GLC++G+L++A +LD
Sbjct: 186 NSFIKGLCKCDRVDEARKFL---ARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN 242
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+ C P+V TYS+L+ G C+ G VE A GLL+ M G + V +N L+ L + G + +
Sbjct: 243 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGK 302
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
+L M+ +G P+ SY + GL +R +AK + RM+ +P+ SY LI
Sbjct: 303 AEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLI 361
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 155/362 (42%), Gaps = 64/362 (17%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
RD + ++ + + K +PN Y +I+ L + ++ D + +++ + V G
Sbjct: 129 RDAVKLLDEM----RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVR-------G 177
Query: 129 FFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
+F +V+ + G R+ +A + L MP P V ++ V+N L +
Sbjct: 178 YFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV---TPDVVSYTTVINGLCKSGDLDSAS 234
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ + G D + L+ G C+ G +E A +LD K C PN+ Y++L+ L
Sbjct: 235 RMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 294
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
G++ +A +L ME G D V++N I GL K +V++ + +RM +GC PN+
Sbjct: 295 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 354
Query: 304 ASYQE----------VLYGLLDKKRFPEAKELVGRMICERMSP----------------- 336
+SY +L GL RF EA L +++ E++
Sbjct: 355 SSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 414
Query: 337 ------------------SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
+ V++ L+HGLC + D + +L MV +GF+P +
Sbjct: 415 QIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGT 474
Query: 379 IV 380
+V
Sbjct: 475 LV 476
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%)
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
+G E + N LL L + A V E ++C+P+ T++ L+ GLC +E+
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A LL RM+ G D +N LISG K + K L M C P +Y ++
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
GL +R +A +L+ M + SP+ +Y ++ GLC ++ +++ +L++M +G+ P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180
Query: 372 RMGMWREIV 380
+ + +
Sbjct: 181 DVVTYNSFI 189
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 150/335 (44%), Gaps = 27/335 (8%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIIN---KLAQAKRFDAI 110
D +S T V+ D S +L+ S R P+ Y+ +I+ K + +R +
Sbjct: 213 DVVSYTTVINGLCKSGDLDSASRMLDHMSNRG-CTPDVVTYSSLIDGFCKGGEVERAMGL 271
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
D M ++ CR + YN + + G I KA + L +M P V ++N +
Sbjct: 272 LDSMLKLG----CR-PNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACI 326
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVE----------IDACCLNILLKGLCENGNLEAAFY- 219
+ L A+ + + ++ + G +D +LL GLC+ G + A
Sbjct: 327 DGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACAL 386
Query: 220 ---VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
VLDE + CEP+V Y+ ++ C++ +++A + ++M + + VT+NIL+
Sbjct: 387 FSKVLDE---KICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVH 442
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
GL ++ + +L M +G P+ +Y ++ + + A EL + P
Sbjct: 443 GLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVP 502
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
V+Y LI GL ++ + E+ + K+V++ +VP
Sbjct: 503 DVVTYSALITGLVHENMAEEAYLLFTKLVERRWVP 537
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 2/187 (1%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
LYT++++ L + RFD + ++ EK+C D FFYNV+ +I KA++
Sbjct: 366 LYTVLLDGLCKGGRFDEACALFSKVLDEKICE-PDVFFYNVMLDSHCKRRQIDKALQIHK 424
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M NC +V T+N++++ L + + + + G D L+ +C+ G
Sbjct: 425 QMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCG 483
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
AA + +E K C P+V TYS L+ GL + EEA+ L ++ D T
Sbjct: 484 KSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLG 543
Query: 273 ILISGLR 279
+L L+
Sbjct: 544 LLHRKLK 550
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%)
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + + T+N L+ L ++ + ++ + + M K C P++ ++ +L GL + +A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
++L+GRM P Y LI G K L +MV+ +P + + IV
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 383 VTFGKDNRNRV 393
+ + R+ V
Sbjct: 122 LCKAERTRDAV 132
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 146/305 (47%), Gaps = 7/305 (2%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
S R + P + L ++ +LA + + ++ RFS+ V+ + A
Sbjct: 38 STRPAFPPPQPLLFHLLRRLATSSPSHLPRLLNLLPRLRHRPRFSESAALVVLSAFSR-A 96
Query: 142 GRISKAIETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA--KLGVEI-- 196
A++ +PS C P +++ N +L+ V A+ + + + S + G I
Sbjct: 97 IMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAP 156
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ NI+L+ LC G+L+ A + D ++ P+ TYSTLM GL ++ ++ A LL
Sbjct: 157 NLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLL 216
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGLLD 315
+ M + D V +N L+ G K G+ E+ M++ +++ K G PN A+Y +L GL
Sbjct: 217 DEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCK 276
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
RF E E+ RM+ + P ++Y LIHGLC V+ V ++++ G V M
Sbjct: 277 FGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAM 336
Query: 376 WREIV 380
+ +V
Sbjct: 337 YNSLV 341
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 157/370 (42%), Gaps = 75/370 (20%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ-----RIKVEKLCR-------FSDGFF 130
+R+ P+ Y+ ++ LA+ R D D++ R++ + +C F G F
Sbjct: 185 RRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEF 244
Query: 131 YNVIKIYGNMA----------------------GRISKAIETLFDMPSYNCWPSVKTFNL 168
V++++ + GR + E M + N P V T+ +
Sbjct: 245 EKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGI 304
Query: 169 VLNLLVSAKLYGEIQG---IYTSAAKLGVEIDACCLNILLKGLCENGNLE--------AA 217
+++ L + G++ G +Y+ K G+ IDA N L+KG C+ G ++ A
Sbjct: 305 LIHGLCRS---GDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAG 361
Query: 218 FYVLDEFPKQN---------------------------CEPNVRTYSTLMHGLCEKGNVE 250
F L N C P+ T+ TL+HGLC+ G
Sbjct: 362 FAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFAN 421
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+AF + E G D +++ +I+GL G++ + +K+ E+M GC PNS Y ++
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALI 481
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
G R +A + +M SP+ ++Y LI GLC + ++ V ++MV+ GF
Sbjct: 482 SGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541
Query: 371 PRMGMWREIV 380
P + + ++
Sbjct: 542 PDITTYGSLI 551
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 138/300 (46%), Gaps = 11/300 (3%)
Query: 89 PNEALYTLIINKLAQA----KRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
P+ + +I+ L Q K F E+ R+ ++L FS + ++I N+ GR+
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEE--ARVSGKQLDVFS---YSSMINGLCNV-GRL 455
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A++ M C P+ +N +++ + IY+ A G N L
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTL 515
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+ + A V E + P++ TY +L+ GL +++A + +++ +G+
Sbjct: 516 IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMK-GKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D + NILI GL GKV+E + + MK K C PN +Y ++ GL + +A
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
L + + + P +SY I GLC+ + + +L +++ +G +P + W +V V
Sbjct: 636 TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAV 695
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 3/233 (1%)
Query: 141 AGRISKAIETLFDM--PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
+G + +AIE L+D+ C P TF +++ L + I+ A G ++D
Sbjct: 381 SGMVDEAIE-LWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDV 439
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+ ++ GLC G L A V ++ K C+PN Y+ L+ G C+ +A + +
Sbjct: 440 FSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSK 499
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G +T+N LI GL K K +E + M G P+ +Y ++ GL K+
Sbjct: 500 MADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKK 559
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A + +++ + + + + LIHGLC+ V++ V M ++ P
Sbjct: 560 IDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCP 612
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 159/363 (43%), Gaps = 26/363 (7%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L P V KI + + + + SKR Y + + ++N+L + K + +
Sbjct: 69 LRPHHVSKIINTHINTDTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHV-- 126
Query: 116 RIKVEKLCRFSD------GFFYNVIKIYGNMAGRISKAIETL------FDMP-------- 155
RI + K CR D F + + + G + TL FDM
Sbjct: 127 RILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYA 186
Query: 156 ---SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
S PS+ TFN ++N+L E ++ + + DA L+ G C N
Sbjct: 187 QIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNR 246
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
L+ AF V D K C PN TYSTL++GLC +G + EA +LE M +GI+ T+
Sbjct: 247 KLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYT 306
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
+ IS L G+V++ + L+ M KGC P+ +Y ++ GL + A + +M+ E
Sbjct: 307 VPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKE 366
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
+ P+ V+Y LI+ LC + + M G + + +I+ + FG D+ +
Sbjct: 367 GLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGL-FGMDDIEK 425
Query: 393 VYV 395
V
Sbjct: 426 AMV 428
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 138/312 (44%), Gaps = 34/312 (10%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK------- 135
K + P+E Y +I+ + + D+ + FFY ++K
Sbjct: 469 KESNCEPDERTYCELISGFCKGGKLDS----------------ATSFFYEMLKCGISPNQ 512
Query: 136 -IYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
Y M G+I A+ M C S++T+N +++ L + E +
Sbjct: 513 WTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAK 572
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ G++ + L+ GLC+N AF + E K+NC PN TY++L++GLC++G
Sbjct: 573 MTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK 632
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V+ A ER+ G + T++ L+SGL ++G+ E +L+E MK KG P+ Y
Sbjct: 633 VDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCS 688
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+L + A E+ M + P YK LI LC E+ + + ++++
Sbjct: 689 LLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQ 748
Query: 369 FVPRMGMWREIV 380
+ + +W +V
Sbjct: 749 WNSDLIVWTVLV 760
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 132/275 (48%), Gaps = 6/275 (2%)
Query: 74 VISVLNQYSK--RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
V S N Y++ P+ + +IN L + + + +I LC D F Y
Sbjct: 178 VTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLC--PDAFTY 235
Query: 132 NVIKIYGNMAGR-ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
+ I G+ R + KA E M C P+ T++ ++N L + GE +
Sbjct: 236 TSL-ILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMT 294
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ G+E + + LC+ G ++ A ++ K+ C P+V+TY+ ++ GL G +E
Sbjct: 295 EKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKME 354
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A G+ +M EG+ +TVT+N LI+ L +G+ +K+ + M+G G N+ +Y +++
Sbjct: 355 LAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQII 414
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
GL +A + +M+ + SP+ V+Y LI
Sbjct: 415 KGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLI 449
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 131/297 (44%), Gaps = 2/297 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K +P+ YT II+ L +A + + + ++ E L + YN + GR
Sbjct: 330 KKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGL--VPNTVTYNALINELCTEGR 387
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
A++ M + + +T+N ++ L + ++ K G N
Sbjct: 388 FGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNT 447
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ + G L A L + NCEP+ RTY L+ G C+ G ++ A M G
Sbjct: 448 LIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCG 507
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I + T+ +I G K+GK++ + L ERM+ GC + +Y ++ GL RF EA+
Sbjct: 508 ISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAE 567
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ +M + + P+ ++Y LI+GLC + +M ++ +P + ++
Sbjct: 568 KFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLI 624
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 135/306 (44%), Gaps = 13/306 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIK-IYGNMAGRISK 146
PN Y +IN+L RF I + E ++ YN +IK ++G I K
Sbjct: 370 PNTVTYNALINELCTEGRFGIALKIFDWM--EGHGTLANAQTYNQIIKGLFG--MDDIEK 425
Query: 147 AIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A+ M P+V T+N L++ L L + +Y E D L+
Sbjct: 426 AMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKES-NCEPDERTYCELI 484
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C+ G L++A E K PN TY+ ++ G C++G ++ A L ERME G
Sbjct: 485 SGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCS 544
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
A T+N +ISGL K + E K +M +G PN+ +Y ++ GL A ++
Sbjct: 545 ASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKI 604
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVT 384
M + P+ +Y LI+GLC + V+ + ++ + G P + + +V G
Sbjct: 605 FHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAE----RLTENGCEPTIDTYSTLVSGLCR 660
Query: 385 FGKDNR 390
G+ N
Sbjct: 661 EGRSNE 666
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 127/299 (42%), Gaps = 2/299 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NPN Y+ +IN L R D+++ + + + + Y V GR+ A
Sbjct: 264 NPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGI--EPTVYTYTVPISSLCDIGRVDDA 321
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
I + M C PSV+T+ +++ L A G+Y K G+ + N L+
Sbjct: 322 INLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINE 381
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC G A + D N +TY+ ++ GL ++E+A + +M +G
Sbjct: 382 LCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPT 441
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+N LI K+G + + L MK C P+ +Y E++ G + A
Sbjct: 442 VVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFY 501
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
M+ +SP+ +Y +I G C + ++ + ++M + G + + I+ ++ G
Sbjct: 502 EMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKG 560
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 115/240 (47%), Gaps = 2/240 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTF-NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ +A+ + ++ P T+ +L+L + KL + ++ K G ++
Sbjct: 211 GKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFE-VFDRMVKDGCNPNSVT 269
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L+ GLC G + A +L+E ++ EP V TY+ + LC+ G V++A L+ M
Sbjct: 270 YSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMG 329
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G T+ +ISGL + GK+E + + +M +G PN+ +Y ++ L + RF
Sbjct: 330 KKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFG 389
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ++ M + +Y ++I GL +E V KM++ G P + + ++
Sbjct: 390 IALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLI 449
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 9/275 (3%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN+ YT +I+ + + D + +R++ E C S YN I + R S+A
Sbjct: 509 SPNQWTYTAMIDGYCKEGKIDVALSLFERME-ENGCSASIET-YNAIISGLSKGNRFSEA 566
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ M P+ T+ ++N L I+ K +A L+ G
Sbjct: 567 EKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYG 626
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G ++AA + + CEP + TYSTL+ GLC +G EA L+E M+ +G+
Sbjct: 627 LCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPS 682
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+ L+ K KV+ +++ M KG P+ Y+ ++ L R EA +
Sbjct: 683 MEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQ 742
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
++ ++ + + + L+ GL + D D +K
Sbjct: 743 SLLKKQWNSDLIVWTVLVDGLLQEG---DSDLCMK 774
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 105/244 (43%), Gaps = 15/244 (6%)
Query: 72 ISVISVLNQYSKRKDY---------NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL 122
IS +S N++S+ + + PN YT +IN L + + I ++EK
Sbjct: 554 ISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFH--EMEKK 611
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
+ Y + IYG A E L + C P++ T++ +++ L E
Sbjct: 612 NCLPNAHTYTSL-IYGLCQEGKVDAAERLTE---NGCEPTIDTYSTLVSGLCREGRSNEA 667
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ + + G+ LL C++ ++ A + + + +P++ Y L+
Sbjct: 668 SQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICA 727
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC EEA + + + + ++D + + +L+ GL ++G + MK L M+ + C P+
Sbjct: 728 LCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPS 787
Query: 303 SASY 306
+Y
Sbjct: 788 LHTY 791
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 116/223 (52%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M C P V T++ +++ L + E I++ G+ + N L++GLC
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
A +L+E N PN+ T+S L++ C++GNV EA G+L+ M G++ + VT++
Sbjct: 313 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 372
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L++G Q +V E KL + M KGC P+ SY ++ G KR EAK+L MI +
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 432
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
++P VSY LI GLC + + + K M+ G +P + +
Sbjct: 433 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTY 475
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P T ++++N + + KLG+++ N L+ GLC+ G A +
Sbjct: 155 PDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVEL 214
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+ + +P+V TY+T+++GLC+ G A GL +M G D VT++ +I L K
Sbjct: 215 FDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCK 274
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+V E + + MK KG PN +Y ++ GL + R+ EA ++ M+ + P+ V+
Sbjct: 275 DRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVT 334
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ LI+ C + V + VLK M + G P + + ++
Sbjct: 335 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM 374
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 142/293 (48%), Gaps = 4/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
P+ Y+ II+ L + +R + DI +K + + + F YN +I+ N + R +A
Sbjct: 260 PDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGIS--PNIFTYNSLIQGLCNFS-RWREA 316
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L +M S N P++ TF+L++N+ E +G+ + ++GVE + + L+ G
Sbjct: 317 SAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG 376
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ A + D + C+P+V +Y+ L++G C+ + EA L M +G+ D
Sbjct: 377 YSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPD 436
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V++N LI GL + G++ E L + M G P+ +Y +L G + +A L
Sbjct: 437 IVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFR 496
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + P+ V Y LI +C + +++ + ++ QG P + ++ I+
Sbjct: 497 AMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTII 549
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 151 LFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
LFD M + C P V ++N+++N AK GE + ++ G+ D N L+ GLC
Sbjct: 389 LFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLC 448
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G L A + P++ TYS L+ G C++G + +AF L M+S + + V
Sbjct: 449 QLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMV 508
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+NILI + K ++E KL + +G PN Y ++ GL + EA E M
Sbjct: 509 MYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNM 568
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ P+ SY +I G K ++ +M ++GFV
Sbjct: 569 EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFV 609
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 8/244 (3%)
Query: 89 PNEALYTLIINKLA-QAKRFDA--IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PN Y+ ++N + QA+ +A + D+M + K C+ D F YN++ A RI
Sbjct: 365 PNVVTYSSLMNGYSLQAEVVEARKLFDVM----ITKGCK-PDVFSYNILINGYCKAKRIG 419
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A + +M P + ++N +++ L E ++ + G D C +ILL
Sbjct: 420 EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILL 479
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C+ G L AF + +PN+ Y+ L+ +C+ N++EA L + +G+
Sbjct: 480 DGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQ 539
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ + +I+GL K+G ++E ++ M+ GC PN SY ++ G L K A +L
Sbjct: 540 PNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQL 599
Query: 326 VGRM 329
+G M
Sbjct: 600 IGEM 603
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 16/189 (8%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRI----KVEKLCRFS---DGFFYNVIKIYGNMA 141
P+ Y +I+ L Q R D+ + + + LC +S DGF
Sbjct: 435 PDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQ--------- 485
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G ++KA M S P++ +N++++ + ++ E + +++ G++ +
Sbjct: 486 GYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIY 545
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++ GLC+ G L+ A + C PN +Y+ ++ G + + A L+ M
Sbjct: 546 TTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRE 605
Query: 262 EGIDADTVT 270
+G AD T
Sbjct: 606 KGFVADVAT 614
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 150/327 (45%), Gaps = 38/327 (11%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
+KR++Y + + Y +I L +++ + ++Q + +C + V+++ GN A
Sbjct: 114 AKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGN-A 172
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-------- 193
+SKAI + + + C P+ + +N ++ +L+ YG++ +Y + G
Sbjct: 173 KMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMT 232
Query: 194 --VEIDACC-------LNILLKGLCENG-------------------NLEAAFYVLDEFP 225
I A C LL + ENG ++ A + +E
Sbjct: 233 YSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMR 292
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
Q C P+V TY+ L+ GL + G ++EA+ M+ EG DTV N +I+ L K G+++
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLD 352
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLD-KKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ MKL + M C P+ +Y ++ L + K R E RM +SPS +Y L
Sbjct: 353 DAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSIL 412
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I G C +E +L++M ++GF P
Sbjct: 413 IDGFCKTNRMEKAMMLLEEMDEKGFPP 439
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 151/348 (43%), Gaps = 41/348 (11%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDY-NPNEALYTLIINKLAQAKRFDAIEDIMQRI 117
T ++ +F L D +S+ + R Y P+ YT +I L +A R D +
Sbjct: 269 TMLITLFFKLDDVHGALSLFEEM--RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEM 326
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
+ E CR N+I G AGR+ A++ +M + C PSV T+N ++ L +K
Sbjct: 327 QREG-CRPDTVVMNNMINFLGK-AGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESK 384
Query: 178 LYG-EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE-----FP------ 225
E+ + + G+ + +IL+ G C+ +E A +L+E FP
Sbjct: 385 SRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAY 444
Query: 226 -----------------------KQNC-EPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
K+NC + R Y+ ++ L + G +++A + + M
Sbjct: 445 CSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNK 504
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D +N L+SGL + G ++E + + RM+ GC P+ SY +L GL
Sbjct: 505 LGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHR 564
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A E++ M + P VSY ++ L + + E+ ++++M GF
Sbjct: 565 AMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGF 612
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 3/261 (1%)
Query: 89 PNEALYTLIINKLAQAK-RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y II L ++K R + +R+K + S F Y+++ R+ KA
Sbjct: 368 PSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSS--FTYSILIDGFCKTNRMEKA 425
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L +M P + +++ L AK Y ++ + A +++K
Sbjct: 426 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKH 485
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L + G L+ A + DE K C P+V Y+ LM GL G ++EA + RM+ G D
Sbjct: 486 LGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD 545
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++NI+++GL K G M++L MK P+ SY VL L F EA +L+
Sbjct: 546 INSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLME 605
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M ++Y ++ +
Sbjct: 606 EMNTLGFEYDLITYSSILEAI 626
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 11/215 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P A Y +I+ L +AKR+D ++ Q +K + C S Y V+ + AGR+
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELK--ENCGSSSARVYAVMIKHLGKAGRL 492
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
AI +M C P V +N +++ L + E + G D NI+
Sbjct: 493 DDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNII 552
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GL + G A +L + P+V +Y+T++ L G EEA L+E M + G
Sbjct: 553 LNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGF 612
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ D +T++ ++ + GKV+ G+GC
Sbjct: 613 EYDLITYSSILEAI---GKVD------HEYTGQGC 638
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 9/341 (2%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ + ++ F L S +LN+ K P +YT++I + +
Sbjct: 229 DTMTYSALISAFCKLGRRDSATQLLNEM-KENGMQPTTKIYTMLITLFFKLDDVHGALSL 287
Query: 114 MQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
+ ++ + CR D F Y +I+ G AGRI +A ++M C P N ++N
Sbjct: 288 FEEMR-HQYCR-PDVFTYTELIRGLGK-AGRIDEAYHFFYEMQREGCRPDTVVMNNMINF 344
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN-CEP 231
L A + ++ L N ++K L E+ + + E K++ P
Sbjct: 345 LGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 404
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+ TYS L+ G C+ +E+A LLE M+ +G + LI L K + + +L
Sbjct: 405 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKK-RFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+ +K + C +SA V+ L K R +A + M +P +Y L+ GL
Sbjct: 465 QELK-ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 523
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNR 390
++++ +++M + G +P + + I+ G G +R
Sbjct: 524 TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHR 564
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 166/359 (46%), Gaps = 22/359 (6%)
Query: 51 NHKDWLSPTEVLK--IFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD 108
+H + SP + L + S DP+ V+ N + + N + L ++N LA AK +
Sbjct: 65 SHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYP 124
Query: 109 AIEDIMQR-IKVEKLCRFSDGFF--------YNVIKIYGNMA-------GRISKAIETLF 152
I I+ +K E C S F + I +M + +E
Sbjct: 125 KIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFK 184
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
Y SV + N +L+ LV +G ++ +Y + + + N ++ GLC+ G
Sbjct: 185 RAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVG 244
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF---GLLERMESEGIDADTV 269
L A V+D+ PNV TY+TL+ G C+ G V + + +L+ M + ++V
Sbjct: 245 KLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSV 304
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
TFN+LI G K + +K+ E M+ +G P +Y ++ GL ++ + EAK L+ M
Sbjct: 305 TFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM 364
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
+ + P+ ++Y LI+G C +KL+E+ + + +QG P + + ++ G FGK
Sbjct: 365 LSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGK 423
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 147/303 (48%), Gaps = 29/303 (9%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI------Y 137
R+ +PN + +IN L + + + D++ +KV GF+ NV+ Y
Sbjct: 223 RRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVW-------GFWPNVVTYNTLIDGY 275
Query: 138 GNMA--GRISKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYTS 188
M G++ KA L +M P+ TFN+++ NL + K++ E+Q
Sbjct: 276 CKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQS---- 331
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G++ N L+ GLC G L A +LDE N +PNV TY+ L++G C+K
Sbjct: 332 ---QGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKL 388
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+EEA L + + +G+ + +TFN L+ G K GK+EE L + M KG PN+++Y
Sbjct: 389 LEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNC 448
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + + E K L+ M C + V+Y LI C +K + ++ +M+ +G
Sbjct: 449 LIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG 508
Query: 369 FVP 371
P
Sbjct: 509 LKP 511
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 148/284 (52%), Gaps = 2/284 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN + ++I+ + + A + + ++ + L + + + +++ N G++++A
Sbjct: 300 SPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGL-KPTVVTYNSLVNGLCN-EGKLNEA 357
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L +M S N P+V T+N ++N KL E + ++ + K G+ + N LL G
Sbjct: 358 KVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHG 417
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G +E AF + ++ PN TY+ L+ G C +G +EE LL M+ G+ AD
Sbjct: 418 YCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKAD 477
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TVT+NILIS ++ + ++ +L++ M KG P+ +Y +L G + A L
Sbjct: 478 TVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRK 537
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+M E + V+Y LI G C + +ED + +L +M+++G +P
Sbjct: 538 QMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIP 581
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 2/233 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +IN + K + ++ I + L + +N + G++ +A
Sbjct: 371 PNVITYNALINGYCKKKLLEEARELFDNIGKQGLT--PNVITFNTLLHGYCKFGKMEEAF 428
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M P+ T+N ++ E++ + GV+ D NIL+
Sbjct: 429 LLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAW 488
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
CE + A ++DE + +P+ TY+ L++G C +GN+ A L ++ME EG A+
Sbjct: 489 CEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANV 548
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
VT+N+LI G ++GK+E+ LL M KG PN +Y+ + +++K P+
Sbjct: 549 VTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPD 601
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF--SDGFFYNVI 134
+L + K + PN + Y +I + + + +++++ ++ CR +D YN++
Sbjct: 429 LLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQ----CRGVKADTVTYNIL 484
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
KA + +M PS T+N++LN + K G
Sbjct: 485 ISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGR 544
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ N+L++G C G LE A +L+E ++ PN TY + + EKG + + G
Sbjct: 545 WANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEG 604
Query: 255 LL 256
L
Sbjct: 605 HL 606
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 154/306 (50%), Gaps = 2/306 (0%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+S++N +K + P Y I++ + + K+ I + + + VE + + YN++
Sbjct: 152 LSIVN-LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVS-PNVYTYNIL 209
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
AG + + +M C P+V T+N +++ + GE + A G+
Sbjct: 210 IRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGL 269
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ N+++ GLC G ++ +L+E K+ P+ T++TL++G C GN +A
Sbjct: 270 NPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALV 329
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L M G+ + VT+ LI+ + K G + M+ L++M+ +G +PN +Y ++ G
Sbjct: 330 LHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFS 389
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ +A +++ M+ +P+ ++Y LI+G C +ED +L++M+++GF+P +
Sbjct: 390 QQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVV 449
Query: 375 MWREIV 380
+ I+
Sbjct: 450 SYSTII 455
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 140/272 (51%), Gaps = 3/272 (1%)
Query: 111 EDIMQRIKVEKL-CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLV 169
ED+ Q +K C+ S F V+K + I+KA+ + SY P V ++N +
Sbjct: 115 EDLFQCLKNSYYQCKSSSAVFDLVVKSCARV-NLINKALSIVNLAKSYGFMPGVLSYNAI 173
Query: 170 LNLLVSAKLYGEI-QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
L+ ++ K +I +GI+ + GV + NIL++G C GNLE + E +
Sbjct: 174 LDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNG 233
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
C PNV TY+T++ C+ + EAF LL M +G++ + +++N++I+GL ++G+++E
Sbjct: 234 CLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETS 293
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
++LE M + P+ ++ ++ G + F +A L M+ +SP+ V+Y LI+ +
Sbjct: 294 EILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSM 353
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C + L +M +G P + ++
Sbjct: 354 CKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLI 385
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 137/283 (48%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y II+ + ++ +++ + ++ L + YNV+ G++ +
Sbjct: 236 PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLN--PNLISYNVVINGLCREGQMKETS 293
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M P TFN ++N + + + ++ K G+ + L+ +
Sbjct: 294 EILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSM 353
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ GNL A LD+ + PN RTY+TL+ G ++G +++A+ +++ M G
Sbjct: 354 CKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTI 413
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+N LI+G G++E+ LL+ M +G P+ SY ++ G + +A +L
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + +SP +Y LI GLC Q+ + +V + ++M+ G P
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP 516
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 147/312 (47%), Gaps = 12/312 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGR 143
K NPN Y ++IN L + + +I++ + + D +N +I Y N+ G
Sbjct: 267 KGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV--PDRVTFNTLINGYCNV-GN 323
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A+ +M P+V T+ ++N + A G+ +
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G + G L+ A+ ++ E + P + TY+ L++G C G +E+A GLL+ M G
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D V+++ +ISG + ++E+ +L M KG P+ A+Y ++ GL ++R E
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK---KMVQQGFVPRMGMWREIV 380
+L M+ + P V+Y LI+ C + D+D L+ +M+Q+GF P + + ++
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEG---DLDKALRLHDEMIQKGFSPDIVTYNVLI 560
Query: 381 GCVTFGKDNRNR 392
F K +R +
Sbjct: 561 N--GFNKQSRTK 570
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 145/308 (47%), Gaps = 17/308 (5%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL+ + +PN YT +IN + +A + + + +++ L +G Y +
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL--HPNGRTYTTLID 386
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ G + +A + + +M P++ T+N ++N + G+ + G
Sbjct: 387 GFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIP 446
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D + ++ G C N LE AF + E + P+V TYS+L+ GLC++ + E L
Sbjct: 447 DVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLF 506
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ M S G+ D VT+ LI+ +G +++ ++L + M KG P+ +Y ++ G +
Sbjct: 507 QEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQ 566
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLI---------------HGLCNQKLVEDVDWVL 361
R EAK L+ +++ E P+ ++Y LI G C + L+ + D VL
Sbjct: 567 SRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVL 626
Query: 362 KKMVQQGF 369
+ M+Q+G+
Sbjct: 627 ESMLQKGY 634
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+I +A + L M P++ ++N+V+N L E I +K D N
Sbjct: 253 KIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFN 312
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C GN A + E K PNV TY+TL++ +C+ GN+ A L++M
Sbjct: 313 TLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDR 372
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + T+ LI G +QG +++ ++++ M G P +Y ++ G R +A
Sbjct: 373 GLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDA 432
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ MI P VSY +I G C + +E + +MV +G P + + ++
Sbjct: 433 SGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 132/342 (38%), Gaps = 66/342 (19%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG---- 142
+ P Y +IN R + ++Q + +E+ GF +V+ ++G
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEM-IER------GFIPDVVSYSTIISGFCRN 461
Query: 143 -RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ KA + +M + P V T++ ++ L + GE+ ++ LG+ D
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL---------------------- 239
L+ C G+L+ A + DE ++ P++ TY+ L
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581
Query: 240 ----------------------------MHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
M G C KG + EA +LE M +G + +
Sbjct: 582 EESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVY 641
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI- 330
N++I G K G +E+ L + M G P+S + + L + + E +L+ +
Sbjct: 642 NVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLK 701
Query: 331 -CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
C R++ + ++ K LI + ++ V VLK M G +P
Sbjct: 702 SC-RITEAALA-KVLIGINSKEGNMDAVFNVLKDMALSGLLP 741
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 18/248 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +P+ A Y+ +I L + +R + D+ Q + L + + ++I Y + G +
Sbjct: 477 KGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP-DEVTYTSLINAYC-IEGDL 534
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE-----IQGIYTSAAKLGVEIDAC 199
KA+ +M P + T+N+++N E ++ +Y + + +
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594
Query: 200 ---CLNI-------LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
C N+ L+KG C G + A VL+ ++ + N Y+ ++HG + GN+
Sbjct: 595 IDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNI 654
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E+A+ L + M G +VT L L +GK E +LL+ K C A+ +V
Sbjct: 655 EKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTL-KSCRITEAALAKV 713
Query: 310 LYGLLDKK 317
L G+ K+
Sbjct: 714 LIGINSKE 721
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 152/306 (49%), Gaps = 9/306 (2%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSD 127
++P+S +S+ S+ K ++ + ++ I+ +LA R + I+ +K +K C +
Sbjct: 24 KNPLSALSLFESASRNKSHSAH--VFHHILRRLAADSRLVSHVSRIVDIVKAQK-CPCKE 80
Query: 128 GFFYNVIKIYGNMAGRIS-KAIETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
VIK Y ++S KA++T +M + C P V+++N +LN V + +
Sbjct: 81 DVALTVIKAYAK--NKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESF 138
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ V + NIL+K C+ +E A +LD QN +P+V +Y TL++G+ +
Sbjct: 139 SRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVK 198
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSA 304
G++ A + + M G+ AD +N+LI G K G ++G ++ ER+ K YPN
Sbjct: 199 VGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVV 258
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ GL RF E+ E+ RM +Y LIHGLC ++ V K++
Sbjct: 259 TYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEI 318
Query: 365 VQQGFV 370
V+ V
Sbjct: 319 VESSLV 324
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 146/323 (45%), Gaps = 38/323 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN--------------VI 134
PN Y ++IN L + RFD +I +R+ + R D F Y+ +
Sbjct: 255 PNVVTYNIMINGLCKCGRFDESLEIWERMTKNE--REKDMFTYSSLIHGLCEAGNIDGAV 312
Query: 135 KIYGNM---------------------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
++Y + AG+I ++ E M NC +V ++N+++ L
Sbjct: 313 RVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSYNILIKGL 371
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
E I+ K G ++ +L+ GLC+NG L A + E + +
Sbjct: 372 FENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDA 431
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
YS+++ GLC++G ++EA ++ +M+ G D N LI+G + K+E+ +
Sbjct: 432 YAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFRE 491
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M+ KGC P SY ++ GL +RF EA V M+ + P ++ L+ GLC +K
Sbjct: 492 MECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKK 551
Query: 354 VEDVDWVLKKMVQQGFVPRMGMW 376
+E + ++ + +GF P + M+
Sbjct: 552 IEMALNLWQQALDKGFKPDITMY 574
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 131/299 (43%), Gaps = 6/299 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K P Y ++I+ L + R + I + + E D + Y+ + GR
Sbjct: 389 KKGCRPESTTYGVLIHGLCKNGRLNKALKIFK--EAEDGPGKLDAYAYSSMVDGLCKEGR 446
Query: 144 ISKAIETL--FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ +AI + D Y P V N ++N V A + + G
Sbjct: 447 MDEAISIVNQMDKRGYKLDPHV--CNPLINGFVRASKLEDAINFFREMECKGCSPTIVSY 504
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+KGLC+ A+ + E ++ +P++ T S LM GLC++ +E A L ++
Sbjct: 505 NTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALD 564
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G D +NIL+ GL K+E+ ++L MK C PN + ++ GL + + +
Sbjct: 565 KGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEK 624
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ ++ + + P +SY I GLC+ + D L + +G +P W +V
Sbjct: 625 ASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILV 683
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 150/339 (44%), Gaps = 61/339 (17%)
Query: 78 LNQYSKRKDYNPNEALYTLIIN---KLAQAKRFDAIEDIM--QRIKVEKLCRFSDGFFYN 132
++Y + D +PN Y ++I K Q ++ ++ D M Q +K + FS G N
Sbjct: 138 FSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPD---VFSYGTLIN 194
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK- 191
+ G++ G A++ +M V +N++++ Y + + I+ K
Sbjct: 195 GMVKVGDLLG----ALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKD 250
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
V + NI++ GLC+ G + + + + K E ++ TYS+L+HGLCE GN++
Sbjct: 251 CSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDG 310
Query: 252 AFGLLERMESEGIDADTVT----------------------------------FNILISG 277
A + + + + D VT +NILI G
Sbjct: 311 AVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKG 370
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR-------FPEAKELVGRMI 330
L + GKVEE + + E + KGC P S +Y +++GL R F EA++ G++
Sbjct: 371 LFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKL- 429
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+Y ++ GLC + +++ ++ +M ++G+
Sbjct: 430 ------DAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGY 462
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A ++ AI +M C P++ ++N ++ L A+ + E + + D
Sbjct: 479 ASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMIT 538
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
++L+ GLC+ +E A + + + +P++ Y+ LMHGLC +E+A L M+
Sbjct: 539 CSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMK 598
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ VT N L+ GL K E+ ++ + + G +P+ SY + GL R
Sbjct: 599 RSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRIS 658
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+A E + + + P+ V++ L+ N
Sbjct: 659 DAIEFLNDALNRGILPTAVTWNILVRAAVN 688
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 137/282 (48%), Gaps = 3/282 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ VL + + K Y P+ T++I+ + + ++ K C+ D YNV+
Sbjct: 201 MQVLGRQLQSKCY-PDVVTCTVLIDATCKESGVGQAMKLFNEMR-NKGCK-PDVVTYNVL 257
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
GR+ +AI L +PSY C P V + N++L L S + + + + + G
Sbjct: 258 IKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGC 317
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
NIL+ LC+ G L A VL+ PK PN R+++ L+ G C ++ A
Sbjct: 318 LPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIE 377
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LE M S G D VT+NIL++ L K GKV++ + +L ++ KGC P+ SY V+ GLL
Sbjct: 378 YLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLL 437
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+ A EL+ M + + P ++ ++ GL + V +
Sbjct: 438 KVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVRE 479
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A++ L C+P V T ++++ G+ ++ G + D
Sbjct: 195 GKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTY 254
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+L+KG C+ G L+ A L + P C+P+V +++ ++ LC G +A LL M
Sbjct: 255 NVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLR 314
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G VTFNILI+ L ++G + + + +LE M G PNS S+ ++ G + K
Sbjct: 315 KGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDR 374
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV- 380
A E + M+ P V+Y L+ LC V+D +L ++ +G P + + ++
Sbjct: 375 AIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVID 434
Query: 381 GCVTFGK 387
G + GK
Sbjct: 435 GLLKVGK 441
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 140/325 (43%), Gaps = 37/325 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ K P+ Y ++I + R D ++++ C+ D +N+I G
Sbjct: 243 RNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG-CQ-PDVISHNMILRSLCSGG 300
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE--------------------- 181
R A++ L M C PSV TFN+++N L L G+
Sbjct: 301 RWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFN 360
Query: 182 --IQGIYTSAA------------KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
IQG G D NILL LC++G ++ A +L + +
Sbjct: 361 PLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSK 420
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
C P++ +Y+T++ GL + G E A LLE M +G+ D +T ++ GL ++GKV E
Sbjct: 421 GCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREA 480
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
MK +K PN+ Y ++ GL ++ A + + M+ + P+ +Y LI G
Sbjct: 481 MKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKG 540
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPR 372
+ + L ED + ++ +G V R
Sbjct: 541 ITYEGLAEDASKLSNELYSRGLVKR 565
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 117/230 (50%), Gaps = 3/230 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR A + + + V ++N++++ + GEI+ ++GV +A
Sbjct: 128 GRTKNASQIMGILEESGAVIDVTSYNVLISGYCKS---GEIEEALRVLDRMGVSPNAATY 184
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ +L LC+ G L+ A VL + C P+V T + L+ C++ V +A L M +
Sbjct: 185 DAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRN 244
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G D VT+N+LI G K G+++E ++ L+++ GC P+ S+ +L L R+ +
Sbjct: 245 KGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMD 304
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A +L+ M+ + PS V++ LI+ LC + L+ VL+ M + G P
Sbjct: 305 AMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTP 354
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 3/167 (1%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L+ L NG LE L+ + P+V + L+ C+ G + A ++ +E G
Sbjct: 86 LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D ++N+LISG K G++EE +++L+RM G PN+A+Y VL L D+ + +A +
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++GR + + P V+ LI C + V + +M +G P
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKP 249
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 3/179 (1%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D L++ C+ G + A ++ + +V +Y+ L+ G C+ G +EEA
Sbjct: 109 GKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA 168
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+L+RM G+ + T++ ++ L +GK+++ M++L R CYP+ + ++
Sbjct: 169 LRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDA 225
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +A +L M + P V+Y LI G C +++ LKK+ G P
Sbjct: 226 TCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQP 284
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 169/364 (46%), Gaps = 24/364 (6%)
Query: 30 TFALASPSASH------QDSDHHAYKLNHKDWLSPTEVLKIFSNLRD-PISVISVLNQYS 82
T LASP H + S H K + L+P+ + + NL + P V+ LN +
Sbjct: 33 TTNLASPLTPHFLEQSARSSQWHFIK-QVESSLTPSLISQTLLNLHESPQVVLDFLNHFH 91
Query: 83 KRKDYNPNEALYTLIINKLAQAK-------------RFDAIEDIMQRIKV--EKLCRFSD 127
+ L +I+ +L K ++I +I + + ++L S
Sbjct: 92 HKLSDARTLCLAIVIVARLPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSS 151
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F +IK +M R +A E + M P+++T N +L+L + +Y
Sbjct: 152 IVFDYLIKSCCDM-NRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+L ++ NI++ LC+ G L+ A + +PN+ TY+T++HG C G
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
VE A +L M+ + I+ D+ T+ LISG+ KQG++EE K+ E M KG P++ Y
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G +K A M+ + +SP+ +Y LIH L ++ ++ + ++K++ ++
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390
Query: 368 GFVP 371
G P
Sbjct: 391 GISP 394
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 2/265 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K +P + Y +I+ L +R D E +++ I+ + + D YN++
Sbjct: 354 KKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS--PDAITYNILINGYCRCAN 411
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
KA +M + P+ KT+ +L++L E ++ GV DA N
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNA 471
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C N N++ AF +L + + P+ T++T+M G C +G VEEA L + M+ G
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D ++FN LISG ++G +++ ++ M G P +Y ++ GL + A+
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAE 591
Query: 324 ELVGRMICERMSPSFVSYKKLIHGL 348
EL+ M+ + M+P +Y LI G+
Sbjct: 592 ELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 144/324 (44%), Gaps = 37/324 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
KR+ P+ Y +I+ + + R + I + + V+K R S + +I + N G
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM-VQKGLRPSAVIYNTLIDGFCN-KG 340
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A +M P++ T+N +++ L + E + + + G+ DA N
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH--------------------- 241
IL+ G C N + AF + DE +P +TY++L+H
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460
Query: 242 --------------GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
G C NV+ AF LL+ M+ + D VTFN ++ G ++GKVEE
Sbjct: 461 GVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEA 520
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+L + MK +G P+ S+ ++ G + +A + M+ +P+ ++Y L+ G
Sbjct: 521 RELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQG 580
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVP 371
LC + + + +LK+MV +G P
Sbjct: 581 LCKNQEGDLAEELLKEMVSKGMTP 604
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 2/242 (0%)
Query: 131 YNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN I ++G + GR+ A L M P T+ +++ + E I+
Sbjct: 259 YNTI-VHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM 317
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ G+ A N L+ G C GNL+ A DE K+ P + TY++L+H L +
Sbjct: 318 VQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRT 377
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+EA +++ ++ +GI D +T+NILI+G + ++ L + M G P +Y +
Sbjct: 378 DEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSL 437
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L+ L K R EA +L ++ E + P + + LI G C+ V+ +LK M +
Sbjct: 438 LHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKV 497
Query: 370 VP 371
P
Sbjct: 498 PP 499
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 119/239 (49%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA + + M + P++ T+N +++ S+ I T+ + +E D+
Sbjct: 235 GKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTY 294
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G+C+ G LE A + +E ++ P+ Y+TL+ G C KGN++ A + M
Sbjct: 295 GSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLK 354
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI T+N LI L + + +E +++ ++ KG P++ +Y ++ G +
Sbjct: 355 KGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKK 414
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A L M+ + P+ +Y L+H L + +++ D + KK+ +G +P M+ ++
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALI 473
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 97/185 (52%), Gaps = 2/185 (1%)
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
I+ C N LL + EAA+ + E + + +V T++ +++ LC++G +++A
Sbjct: 186 IETC--NSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+ ME+ G+ + VT+N ++ G G+VE +L MK + P+S +Y ++ G+
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCK 303
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
+ R EA ++ M+ + + PS V Y LI G CN+ ++ +M+++G P M
Sbjct: 304 QGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMST 363
Query: 376 WREIV 380
+ ++
Sbjct: 364 YNSLI 368
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L+K C+ + AF ++ P + T ++L+ + E A+ L M
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
I + TFNI+I+ L K+GK+++ + M+ G PN +Y +++G R
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ++ M +++ P +Y LI G+C Q +E+ + ++MVQ+G P ++ ++
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 138/287 (48%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ +NP+ +++ KL + ++ A+ + + ++C D +N++ + G++
Sbjct: 127 RGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVC--PDVSTFNILINVLCVEGKL 184
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA L M PSV T+N VLN Y + G+E DAC N+L
Sbjct: 185 KKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNML 244
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ LC+N + +L + K+ PN TY+++++G ++G + A + + M +
Sbjct: 245 VDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNL 304
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ VT+N LI G G E+ + +LE M+ G PN SY +L GL +F +K
Sbjct: 305 LPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKS 364
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ RM M ++Y +I GLC L+ + +L KM++ G VP
Sbjct: 365 ILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVP 411
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 125/250 (50%), Gaps = 1/250 (0%)
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
LC+ + F +I++Y G + A+ET M PSV T N++L LV + G
Sbjct: 93 LCKSNPSVFDLLIRVYLR-EGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGA 151
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
+ + V D NIL+ LC G L+ A Y+L + + P+V TY+T+++
Sbjct: 152 VWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLN 211
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
C+KG + A L+++M S+GI+AD T+N+L+ L K + +G LL++M+ + P
Sbjct: 212 WYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISP 271
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N +Y ++ G + + + A + M + P+ V+Y LI G C+ E +L
Sbjct: 272 NEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTIL 331
Query: 362 KKMVQQGFVP 371
+ M G P
Sbjct: 332 EMMEATGPKP 341
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 2/283 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ Y ++N + R+ A +++ ++ + + +D YN++ R +K
Sbjct: 199 YVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGI--EADACTYNMLVDDLCKNNRSAK 256
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
L M P+ T+N ++N V G I+ + L + + N L+
Sbjct: 257 GYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALID 316
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C +GN E A +L+ +PN +YS L++GLC E + +LERM G+
Sbjct: 317 GHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIV 376
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ + +I GL + G + E +KLL++M G P+ ++ ++ G + KE++
Sbjct: 377 GCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEII 436
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+M ++P+ + Y LI+ C V + V M + G+
Sbjct: 437 CKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGY 479
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 158/387 (40%), Gaps = 76/387 (19%)
Query: 64 IFSNLRDPISVISVLNQYSK---RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
IF+ L +++ L+ Y + +P + +YT ++ L +A + A + ++
Sbjct: 629 IFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKN 688
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFNLVL-------NL 172
LC +D NVI + G+++KA + M S PS+ T+N++L NL
Sbjct: 689 GLC--ADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNL 746
Query: 173 LVSAKLYGEIQ--GI-------------YTSAAKL-------------GVEIDACCLNIL 204
+ LY + GI + +A L GV +D C N+L
Sbjct: 747 SKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNML 806
Query: 205 LKGLCENGNLEAAF------YVLDEFP-----------------------------KQNC 229
+ CE + AF + D FP ++ C
Sbjct: 807 IMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGC 866
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
P+ R Y L++ +C G++ AF L + ME+ GI + V + L+ GL K GKVEE
Sbjct: 867 IPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKL 926
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+L+ M K P A++ +++ + EA +L M + ++Y LI GLC
Sbjct: 927 VLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLC 986
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMW 376
V + K++ Q+G P M +
Sbjct: 987 ADGDVASALKLYKEIKQRGLWPNMTTY 1013
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 125/317 (39%), Gaps = 37/317 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+++ +PNE Y IIN + + A I Q + + L + YN + G
Sbjct: 265 RKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNL--LPNCVTYNALIDGHCHDG 322
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLN-------------LLVSAKLYGEIQGIYTSA 189
+A+ L M + P+ +++ +LN +L ++ G I G
Sbjct: 323 NFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYT 382
Query: 190 A----------------------KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
A K GV D ++L+ G C G ++ ++ + K
Sbjct: 383 AMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKA 442
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
PN Y+TL++ C+ G+V EAF + M G DA+ N+L+S L K GKV
Sbjct: 443 GLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVA 502
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
M G PNS ++ ++ G + +A + MI PS +Y L+
Sbjct: 503 EYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKA 562
Query: 348 LCNQKLVEDVDWVLKKM 364
LC ++ +L K+
Sbjct: 563 LCRAGKFKEAKRLLDKL 579
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 126/283 (44%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PNE Y+ ++N L + +F+ + I++R+++ + + + + N G +++++
Sbjct: 341 PNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRN--GLLNESV 398
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L M P V TF++++N ++ I K G+ ++ L+
Sbjct: 399 KLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNY 458
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G++ AF V + + N + L+ LC+ G V A M G ++
Sbjct: 459 CKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNS 518
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+TF+ +I+G G + + + M G +P+ +Y +L L +F EAK L+ +
Sbjct: 519 ITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDK 578
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + V+Y ++ ++ D + +MVQ+ +P
Sbjct: 579 LHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLP 621
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 107/225 (47%), Gaps = 11/225 (4%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PSV F+L++ + + + G+ + G N+LL L + + A +
Sbjct: 98 PSV--FDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLF 155
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
E + P+V T++ L++ LC +G +++A LL++ME G VT+N +++ K
Sbjct: 156 FKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCK 215
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G+ + ++L+++M KG ++ +Y ++ L R + L+ +M +SP+ ++
Sbjct: 216 KGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEIT 275
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
Y +I+G + + + ++M +P CVT+
Sbjct: 276 YNSIINGFVKEGKIGAATRIFQEMSMLNLLPN---------CVTY 311
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 18/264 (6%)
Query: 142 GRIS-KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV------ 194
GR++ K + + P ++ ++LV A+LY + I +++GV
Sbjct: 25 GRLALKFLNWVIQQPGLELRHLTHMLSITTHILVRARLYENAKSILKHLSQMGVGSKSVF 84
Query: 195 ----------EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ + ++L++ G + A + P+V T + L+ L
Sbjct: 85 GALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLV 144
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++ V + + M + + D TFNILI+ L +GK+++ LL++M+ G P+
Sbjct: 145 KERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVV 204
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y VL K R+ A EL+ +M + + +Y L+ LC +LKKM
Sbjct: 205 TYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKM 264
Query: 365 VQQGFVPRMGMWREIV-GCVTFGK 387
++ P + I+ G V GK
Sbjct: 265 RKRMISPNEITYNSIINGFVKEGK 288
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYN------------PNEALYTLIINKL 101
D ++ + IF ++ S+ISVL++ S ++ + P+ Y ++N++
Sbjct: 821 DLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRM 880
Query: 102 AQAKRFDA---IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYN 158
+ ++D M+ + + + K G++ +A L M +
Sbjct: 881 CRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAK-----CGKVEEAKLVLDFMLRKS 935
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
P++ TF ++++ + E + + V++D N+L+ GLC +G++ +A
Sbjct: 936 LIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASAL 995
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGL 243
+ E ++ PN+ TY L+ +
Sbjct: 996 KLYKEIKQRGLWPNMTTYCILIDAI 1020
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 79/198 (39%), Gaps = 45/198 (22%)
Query: 143 RISKAIET---LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT---SAAKLGVEI 196
R+S E+ L +M C P + + ++N + G I G + LG+
Sbjct: 847 RVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRM---GHIHGAFKLKDEMEALGISS 903
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH--------------- 241
+ L++GL + G +E A VLD +++ P + T++TLMH
Sbjct: 904 GDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLK 963
Query: 242 --------------------GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
GLC G+V A L + ++ G+ + T+ ILI +
Sbjct: 964 DTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTN 1023
Query: 282 G-KVEEGMKLLERMKGKG 298
+ +G LL+ ++ +G
Sbjct: 1024 DISLAKGEVLLKDLQERG 1041
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 158/353 (44%), Gaps = 22/353 (6%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L V +I + +D SVI SKR Y N + ++N+L + + F + I
Sbjct: 73 LKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI-- 130
Query: 116 RIKVEKLCRFSD---------------GFFY-----NVIKIYGNMAGRISKAIETLFDMP 155
RI + K CR + GF + N + I + A M
Sbjct: 131 RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML 190
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
+ PS+ TFN ++N+L E + I + + + D L+ G C N NL+
Sbjct: 191 NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLD 250
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
AF V D K+ C+PN TYSTL++GLC +G V+EA +LE M +GI+ T+ + I
Sbjct: 251 LAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 310
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+ L EE ++L+ RMK +GC PN +Y ++ GL + A L +M+ E +
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
P+ V+Y LI+ LC + M G + + EI+ + G D
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 423
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 146/301 (48%), Gaps = 8/301 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K++ PN YT +I+ L++ + + + ++ E L + YN + + G
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL--VPNTVTYNALINELCVGG 387
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDAC 199
R S A++ M + + +T+N ++ L L G+I+ ++ K+G
Sbjct: 388 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLC---LGGDIEKAMVLFEKMLKMGPLPTVV 444
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ G GN+ A +LD + CEP+ TY+ L+ G + G +E A + M
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G++ + V++ LI G K GKV+ + LL+RM+ GC PN SY V+ GL + RF
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA+++ +M+ + + P+ ++Y LI GLC + + M ++ +P + + +
Sbjct: 565 SEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624
Query: 380 V 380
+
Sbjct: 625 I 625
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 143/314 (45%), Gaps = 5/314 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +IN L++ + E I+ +I L D F Y + I G+ R
Sbjct: 196 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLS--PDVFTYTSL-ILGHCRNRNLDLA 252
Query: 149 ETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+FD M C P+ T++ ++N L + E + + G+E + +
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC + E A ++ K+ C PNV+TY+ L+ GL G +E A GL +M EG+ +
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TVT+N LI+ L G+ +K+ M+G G N+ +Y E++ GL +A L
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
+M+ P+ V+Y LI+G + V + +L M + G P + E+V G +G
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492
Query: 387 KDNRNRVYVTETVD 400
K Y E V+
Sbjct: 493 KLESASFYFQEMVE 506
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 134/304 (44%), Gaps = 6/304 (1%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
+R+ ++S + QY D +P+ YT +I + + D + R+ V++ C +
Sbjct: 214 VREAELILSQIFQY----DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM-VKEGCDPNS 268
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+ +I N GR+ +A++ L +M P+V T+ L + L + + E +
Sbjct: 269 VTYSTLINGLCN-EGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVA 327
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
K G + L+ GL G LE A + + K+ PN TY+ L++ LC G
Sbjct: 328 RMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 387
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
A + ME G A+T T+N +I GL G +E+ M L E+M G P +Y
Sbjct: 388 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 447
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G L K A L+ M P +Y +L+ G +E + ++MV+
Sbjct: 448 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 507
Query: 368 GFVP 371
G P
Sbjct: 508 GLNP 511
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 39/239 (16%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ A+ L M C P+V+++N V+N
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVIN------------------------------ 556
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
GL + A + D+ +Q PNV TY+TL+ GLC G + AF + ME
Sbjct: 557 -----GLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK 611
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ T++ LI GL ++GK +E ERM GC P +Y ++ GL K RF E
Sbjct: 612 RKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYE 667
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A++LV M P Y L+ C V+ + + +GF + ++R ++
Sbjct: 668 AEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALI 726
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 107/252 (42%), Gaps = 37/252 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLCRFSDGFFYNV 133
NPN Y +IN L++ RF E I ++ ++ LCR +G
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCR--NGRTQFA 602
Query: 134 IKIYGNMAGRISKAIETLFD-------------------MPSYNCWPSVKTFNLVLNLLV 174
KI+ +M R K + L+ M C P++ T++ +++ L
Sbjct: 603 FKIFHDMEKR--KCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLC 660
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
+ E + + + G D LL C+N ++ A + + + ++
Sbjct: 661 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 720
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y L+ LC+ G VEEA L + M + +AD + + +L+ GL K+G+++ MKLL M
Sbjct: 721 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 780
Query: 295 KGKGCYPNSASY 306
+ K PN +Y
Sbjct: 781 ESKNFTPNIQTY 792
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 169/364 (46%), Gaps = 24/364 (6%)
Query: 30 TFALASPSASH------QDSDHHAYKLNHKDWLSPTEVLKIFSNLRD-PISVISVLNQYS 82
T LASP H + S H K + L+P+ + + NL + P V+ LN +
Sbjct: 33 TTNLASPLTPHFLEQSARSSQWHFIK-QVESSLTPSLISQTLLNLHESPQVVLDFLNHFH 91
Query: 83 KRKDYNPNEALYTLIINKLAQAK-------------RFDAIEDIMQRIKV--EKLCRFSD 127
+ L +I+ +L K ++I +I + + ++L S
Sbjct: 92 HKLSDARTLCLAIVIVARLPSPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLGFKSS 151
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F +IK +M R +A E + M P+++T N +L+L + +Y
Sbjct: 152 IVFDYLIKSCCDM-NRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+L ++ NI++ LC+ G L+ A + +PN+ TY+T++HG C G
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
VE A +L M+ + I+ D+ T+ LISG+ KQG++EE K+ E M KG P++ Y
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G +K A M+ + +SP+ +Y LIH L ++ ++ + ++K++ ++
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390
Query: 368 GFVP 371
G P
Sbjct: 391 GISP 394
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 128/265 (48%), Gaps = 2/265 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K +P + Y +I+ L +R D E +++ I+ + + D YN++
Sbjct: 354 KKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS--PDAITYNILINGYCRCAN 411
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
KA +M + P+ KT+ +L++L E ++ GV D N
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNA 471
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C N N++ AF +L + + P+ T++T+M G C +G VEEA L + M+ G
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D ++FN LISG ++G +++ ++ M G P +Y ++ GL + A+
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAE 591
Query: 324 ELVGRMICERMSPSFVSYKKLIHGL 348
EL+ M+ + M+P +Y LI G+
Sbjct: 592 ELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 144/324 (44%), Gaps = 37/324 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
KR+ P+ Y +I+ + + R + I + + V+K R S + +I + N G
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM-VQKGLRPSAVIYNTLIDGFCN-KG 340
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A +M P++ T+N +++ L + E + + + G+ DA N
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH--------------------- 241
IL+ G C N + AF + DE +P +TY++L+H
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460
Query: 242 --------------GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
G C NV+ AF LL+ M+ + D VTFN ++ G ++GKVEE
Sbjct: 461 GVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEA 520
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+L + MK +G P+ S+ ++ G + +A + M+ +P+ ++Y L+ G
Sbjct: 521 RELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQG 580
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVP 371
LC + + + +LK+MV +G P
Sbjct: 581 LCKNQEGDLAEELLKEMVSKGMTP 604
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 120/239 (50%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA + + M + P++ T+N +++ S+ I T+ + +E D+
Sbjct: 235 GKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTY 294
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G+C+ G LE A + +E ++ P+ Y+TL+ G C KGN++ A + M
Sbjct: 295 GSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLK 354
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI T+N LI L + + +E +++ ++ KG P++ +Y ++ G +
Sbjct: 355 KGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKK 414
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A L M+ + P+ +Y L+H L + +++ D + KK+ +G +P + M+ ++
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALI 473
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 2/242 (0%)
Query: 131 YNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN I ++G + GR+ A L M P T+ +++ + E I+
Sbjct: 259 YNTI-VHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM 317
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ G+ A N L+ G C GNL+ A DE K+ P + TY++L+H L +
Sbjct: 318 VQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRT 377
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+EA +++ ++ +GI D +T+NILI+G + ++ L + M G P +Y +
Sbjct: 378 DEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSL 437
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L+ L K R EA +L ++ E + P + + LI G C+ V+ +LK M +
Sbjct: 438 LHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKV 497
Query: 370 VP 371
P
Sbjct: 498 PP 499
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 97/185 (52%), Gaps = 2/185 (1%)
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
I+ C N LL + EAA+ + E + + +V T++ +++ LC++G +++A
Sbjct: 186 IETC--NSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+ ME+ G+ + VT+N ++ G G+VE +L MK + P+S +Y ++ G+
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCK 303
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
+ R EA ++ M+ + + PS V Y LI G CN+ ++ +M+++G P M
Sbjct: 304 QGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMST 363
Query: 376 WREIV 380
+ ++
Sbjct: 364 YNSLI 368
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L+K C+ + AF ++ P + T ++L+ + E A+ L M
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
I + TFNI+I+ L K+GK+++ + M+ G PN +Y +++G R
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ++ M +++ P +Y LI G+C Q +E+ + ++MVQ+G P ++ ++
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 2/276 (0%)
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
LII KL + F+ ++Q +K + + S F +I+ Y AG KA+E+ M
Sbjct: 98 LIIGKLIKENAFELYWKVLQELKNSAI-KISSEAFSVLIEAYSE-AGMDEKAVESFSLMR 155
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
++C P + FNL+L+ LV + + +Y K + D IL+ GLC+ +
Sbjct: 156 DFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A + DE + PN YS ++ GLC+ + +A L +M + G + D +T+N+L+
Sbjct: 216 DALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLL 275
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+G K G +++ LL+ + G Y ++ GL +R+ EA +M+ E +
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P + Y +I GL + V + +L +M ++G P
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRP 371
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 16/249 (6%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+++L + ++R P+ Y +I D E + R+++ K F + Y+++
Sbjct: 358 LTLLGEMTER-GLRPDTICYNALIKGFCDMGYLDEAESL--RLEISKHDCFPNNHTYSIL 414
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK-------LYGEIQGIYT 187
G I+KA +M C PSV TFN ++N L A L+ +++ +
Sbjct: 415 ICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRK 474
Query: 188 SAAKLGVE------IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
+ L + D L ++++ LCE+G + A+ +L + P++RTY+ L++
Sbjct: 475 PSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILIN 534
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
G C+ GN+ AF L + M+ +G D+VT+ LI GL + G+ E+ +++ E+M KGC P
Sbjct: 535 GFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVP 594
Query: 302 NSASYQEVL 310
S++Y+ ++
Sbjct: 595 ESSTYKTIM 603
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 140/307 (45%), Gaps = 8/307 (2%)
Query: 78 LNQYSKRKDYN--PNEALYTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ +S +D++ P+ + LI++ L + + F A+ Q +K C + I
Sbjct: 148 VESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLK----CNLNPDVVTYGI 203
Query: 135 KIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
I+G ++ LFD M P+ +++VL+ L AK + Q +++ G
Sbjct: 204 LIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASG 263
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
D N+LL G C++G L+ AF +L K V Y L++GL EEA
Sbjct: 264 CNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAH 323
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
++M E I D + + I+I GL ++G+V E + LL M +G P++ Y ++ G
Sbjct: 324 MWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGF 383
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
D EA+ L + P+ +Y LI G+C L+ + K+M + G +P +
Sbjct: 384 CDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSV 443
Query: 374 GMWREIV 380
+ ++
Sbjct: 444 VTFNSLI 450
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 138/282 (48%), Gaps = 17/282 (6%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAG 142
R++ P+ LYT++I L+Q R ++ + E+ R D YN +IK + +M G
Sbjct: 331 RENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEM-TERGLR-PDTICYNALIKGFCDM-G 387
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ +A ++ ++C+P+ T+++++ + L + Q I+ KLG N
Sbjct: 388 YLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFN 447
Query: 203 ILLKGLCENGNLEAA---FYVLDEFPK--------QNCEP--NVRTYSTLMHGLCEKGNV 249
L+ GLC+ LE A FY ++ K Q + ++ + +M LCE G +
Sbjct: 448 SLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMI 507
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+A+ LL ++ G+ D T+NILI+G K G + KL + M+ KG P+S +Y +
Sbjct: 508 LKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTL 567
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ GL R +A E+ +M+ + P +YK ++ C +
Sbjct: 568 IDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRE 609
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 137/300 (45%), Gaps = 15/300 (5%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y +IN L +A+R++ Q++ E + D Y ++ + GR+++A+ L +
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENI--KPDVMLYTIMIRGLSQEGRVTEALTLLGE 363
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P +N ++ E + + +K + +IL+ G+C+NG
Sbjct: 364 MTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGL 423
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-----------SE 262
+ A ++ E K C P+V T+++L++GLC+ +EEA L +ME S+
Sbjct: 424 INKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQ 483
Query: 263 GIDA--DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G D D + +++ L + G + + KLL ++ G P+ +Y ++ G
Sbjct: 484 GTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNIN 543
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +L M + P V+Y LI GL ED + ++MV++G VP ++ I+
Sbjct: 544 GAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIM 603
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 141/329 (42%), Gaps = 46/329 (13%)
Query: 89 PNEALYTLIINKLAQAKR-FDAI-------------EDIMQRIKVEKLCR---FSDGF-F 130
PN+ +Y+++++ L QAK+ FDA + I + + C+ D F
Sbjct: 231 PNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTL 290
Query: 131 YNVIKIYGNMAGRISKA--IETLFDMPSY-------------NCWPSVKTFNLVLNLLVS 175
++ G++ G I I LF Y N P V + +++ L
Sbjct: 291 LQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQ 350
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
E + + G+ D C N L+KG C+ G L+ A + E K +C PN T
Sbjct: 351 EGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHT 410
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM- 294
YS L+ G+C+ G + +A + + ME G VTFN LI+GL K ++EE L +M
Sbjct: 411 YSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470
Query: 295 ------------KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+G + AS Q ++ L + +A +L+ +++ + P +Y
Sbjct: 471 IVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYN 530
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
LI+G C + + K+M +G +P
Sbjct: 531 ILINGFCKFGNINGAFKLFKEMQLKGHMP 559
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
+Q + SA K+ E ++L++ E G E A +C+P++ ++ ++H
Sbjct: 116 LQELKNSAIKISSE----AFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILH 171
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
L K A + +M ++ D VT+ ILI GL K K ++ + L + M +G P
Sbjct: 172 FLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILP 231
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N Y VL GL K+ +A+ L +M + ++Y L++G C ++D +L
Sbjct: 232 NQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLL 291
Query: 362 KKMVQQGFVPRMGMWREIVGCVTFG 386
+ + + G I+G + +G
Sbjct: 292 QLLTKDG---------HILGVIGYG 307
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 127/305 (41%), Gaps = 38/305 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK----LCRFSDGF--FYNVIKIYGNM-- 140
P+ + +IN L +A R + + ++++ + R S G +++ + M
Sbjct: 441 PSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMER 500
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GV 194
+G I KA + L + P ++T+N+++N +G I G + ++ G
Sbjct: 501 LCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCK---FGNINGAFKLFKEMQLKGH 557
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D+ L+ GL G E A + ++ K+ C P TY T+M C + N+ A
Sbjct: 558 MPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALS 617
Query: 255 LLER-------MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+ + E E + +F+ +++ ++ L M K + A Y
Sbjct: 618 VWMKYLRDFRGWEDEKVRVVAESFD--------NEELQTAIRRLLEMDIKSKNFDLAPYT 669
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM--- 364
L GL+ KR EA + + +M+ S S LI LC +VE++D +
Sbjct: 670 IFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLC---MVENLDMAMDVFLFT 726
Query: 365 VQQGF 369
+++GF
Sbjct: 727 LERGF 731
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 2/208 (0%)
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
V +++ +N L E I+ + G D+ NIL+ GLC++ LE ++D
Sbjct: 91 VISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMD 150
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
E + P V TY+TL+HG C G V+ A +L+ ME GI +TVT+ LI GL G
Sbjct: 151 EMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCG 210
Query: 283 KVEEGMKLLERMKGKG--CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+VE + +L+ MK +G C PN +Y ++++GL K F E + MI P+ +
Sbjct: 211 EVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNAT 270
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
Y LIHGLC + + +L +MV G
Sbjct: 271 YTALIHGLCQKGSFLEAAVLLNEMVAIG 298
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 140/301 (46%), Gaps = 12/301 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMA 141
+ K P+ Y ++IN L + + + +M ++ FS I+G A
Sbjct: 118 EEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARG---FSPTVVTYTTLIHGFCTA 174
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ A++ L +M P+ T+ ++ L GE++ ++ + + CC
Sbjct: 175 GRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC---GEVERAILVLKEMKLRGNECCP 231
Query: 202 NI-----LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
N+ L+ GLC+ G E LDE C PN TY+ L+HGLC+KG+ EA LL
Sbjct: 232 NVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLL 291
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M + G + D V +N LI GL K G+++ ++ M KG P+ +Y ++ GL D
Sbjct: 292 NEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDA 351
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
EA L+ M + + P+ V+Y LI+G + ++ +M G +P ++
Sbjct: 352 GLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIY 411
Query: 377 R 377
+
Sbjct: 412 K 412
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 4/280 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ IN L + + +I + ++E+ D F YN++ ++ + + +
Sbjct: 94 YSRKINGLCKKGQIAEAMEIFR--EMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDE 151
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P+V T+ +++ +A I G+ + L++GLC+ G
Sbjct: 152 MQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGE 211
Query: 214 LEAAFYVLDEFPKQN--CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
+E A VL E + C PNV TY+ L+HGLC+KG E L+ M G + T+
Sbjct: 212 VERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATY 271
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
LI GL ++G E LL M GC + Y ++ GL A+E+ M+
Sbjct: 272 TALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVE 331
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ ++P +Y LI GLC+ L+++ ++++M +G VP
Sbjct: 332 KGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVP 371
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 81/139 (58%)
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+ +V +YS ++GLC+KG + EA + ME +G D+ T+NILI+GL K ++E G+
Sbjct: 88 DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVS 147
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
L++ M+ +G P +Y +++G R A +++ M ++P+ V+Y LI GLC
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLC 207
Query: 350 NQKLVEDVDWVLKKMVQQG 368
+ VE VLK+M +G
Sbjct: 208 DCGEVERAILVLKEMKLRG 226
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%)
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D D ++++ I+GL K+G++ E M++ M+ KG P+S +Y ++ GL +
Sbjct: 88 DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVS 147
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ M SP+ V+Y LIHG C V+ +L +M +G P + ++
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALI 203
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 148/325 (45%), Gaps = 39/325 (12%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMA 141
K + P+ Y +I+ + + + + I++++K ++ YN +I Y N
Sbjct: 298 KNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMK--EIGLLPTAVTYNTLIDGYCN-K 354
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + KA +M P+V T+NL+++ L E G+ G+ D+
Sbjct: 355 GDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITY 414
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH-------------------- 241
NIL+ G C GN + AF + DE + +P + TY++L++
Sbjct: 415 NILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIR 474
Query: 242 ---------------GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
G C GN++ AF LL+ M+ I D VT+N L+ G ++GKVEE
Sbjct: 475 EGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEE 534
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+LL+ MK +G P+ SY ++ G + +A + M+ +P+ ++Y LI
Sbjct: 535 ARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQ 594
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
GLC + + + +LK+MV +G P
Sbjct: 595 GLCKNQQGDLAEELLKEMVSKGITP 619
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 117/229 (51%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R A E M P ++TFN +L+L + + +Y +L ++ N
Sbjct: 181 RGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFN 240
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ LC+ G L+ A + +PNV TY+T++HG C +G VE A +L+ M++
Sbjct: 241 IMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNR 300
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G++ D+ T+ LISG+ K GK+EE +LE+MK G P + +Y ++ G +K +A
Sbjct: 301 GVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKA 360
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + P+ +Y LIH L + +++ D ++K M G VP
Sbjct: 361 FGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVP 409
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 128/265 (48%), Gaps = 2/265 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ P + Y L+I+ L + D + +++ + + D YN++ G
Sbjct: 369 RRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIV--PDSITYNILINGYCRCGN 426
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
KA +M S P++ T+ ++ +L ++ + G D N
Sbjct: 427 AKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNA 486
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C NGNL+ AF +L E K+N P+ TY+TLM G C +G VEEA LL+ M+ G
Sbjct: 487 LIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRG 546
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +++N LISG K+G + + + + M G P +Y ++ GL ++ A+
Sbjct: 547 IRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAE 606
Query: 324 ELVGRMICERMSPSFVSYKKLIHGL 348
EL+ M+ + ++P +Y LI G+
Sbjct: 607 ELLKEMVSKGITPDDSTYFSLIEGI 631
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 135/279 (48%), Gaps = 4/279 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKAIETLF 152
+ ++IN L + + +D + + E L + YN + I+G + GR+ A L
Sbjct: 239 FNIMINVLCKEGKLKKAKDFIGSM--ENLGVKPNVVTYNTV-IHGYCSRGRVEGARMVLD 295
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M + P T+ +++ + E GI ++G+ A N L+ G C G
Sbjct: 296 IMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKG 355
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+L AF DE ++ P V TY+ L+H L +G ++EA G+++ M GI D++T+N
Sbjct: 356 DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYN 415
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
ILI+G + G ++ L + M KG P +Y ++Y L + R A +L ++I E
Sbjct: 416 ILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE 475
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
SP + + LI G C ++ +LK+M ++ VP
Sbjct: 476 GASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVP 514
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 115/232 (49%), Gaps = 4/232 (1%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
+V TFN+++N+L + + S LGV+ + N ++ G C G +E A VL
Sbjct: 235 TVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVL 294
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
D + EP+ TY +L+ G+C+ G +EEA G+LE+M+ G+ VT+N LI G +
Sbjct: 295 DIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNK 354
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G + + + M + P ++Y +++ L + + EA ++ M + P ++Y
Sbjct: 355 GDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITY 414
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRV 393
LI+G C + + +M+ +G P + + ++ ++ RNR+
Sbjct: 415 NILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLS----KRNRM 462
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GR 143
K P YT +I L++ R A +D+ ++I E D +N + I G+ A G
Sbjct: 440 KGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGAS--PDLIMFNAL-IDGHCANGN 496
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A L +M N P T+N ++ E + + + G+ D N
Sbjct: 497 LDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNT 556
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G + G++ AF + DE P + TY+ L+ GLC+ + A LL+ M S+G
Sbjct: 557 LISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKG 616
Query: 264 IDADTVTFNILISGLRKQGKVEE 286
I D T+ LI G+ GKV++
Sbjct: 617 ITPDDSTYFSLIEGI---GKVDD 636
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 158/319 (49%), Gaps = 6/319 (1%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L+P V+K+ + D + + K++ Y+ N Y +I+ L +AK F ++ ++Q
Sbjct: 181 LNPDAVVKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQ 240
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSV--KTFNLVLNLL 173
+++ + + ++ + YG +GR +++E M P + +N VL L
Sbjct: 241 KMQTQGR-EITRSMLHSFVMSYGR-SGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSL 298
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
V K + ++ GV + +++ +E A +LD+ + N P+V
Sbjct: 299 VKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDV 358
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY+ ++ LC++ +E+A+G+L++M G + + T+N LI GL + EE ++L+
Sbjct: 359 VTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTL 418
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC-NQK 352
M+ G PN +Y + +GL +R AKE+ + + P+ V+Y L++G C +
Sbjct: 419 MEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSR 478
Query: 353 LVEDVDWVLKKMVQQGFVP 371
L+E +D +LK+M Q P
Sbjct: 479 LIEAMD-ILKEMHQNDCTP 496
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 147/298 (49%), Gaps = 4/298 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-G 142
+ +Y P+ YT++I+ L + K + ++Q+++ E C + + YN + I G A
Sbjct: 351 QNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMR-ENGCE-PNIYTYNAL-IQGLCAVR 407
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R +A+E + M P++ T+ ++ + L + + ++ A G++ + N
Sbjct: 408 RPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYN 467
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
LL G C L A +L E + +C P+ TY+TL+ GL + + +A + + ME++
Sbjct: 468 TLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENK 527
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D + T NIL GL + G ++ RMK +G +++ Y ++ L EA
Sbjct: 528 GYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEA 587
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ L+ MI + SP+ +Y +I G C Q ++D D +L M++ G P G + ++
Sbjct: 588 QALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILI 645
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 139/304 (45%), Gaps = 4/304 (1%)
Query: 83 KRKDYNPN--EALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
K Y P + Y ++ L + K+ D E++ ++ + ++ + ++I+ + +
Sbjct: 278 KEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQM-INNGVSCNNLTYTSMIQCFF-L 335
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
++ A++ L DM N P V T+ +V++ L K+ + G+ + G E +
Sbjct: 336 KEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYT 395
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L++GLC E A ++ + PN+ TY+ L HGLC+ ++ A +
Sbjct: 396 YNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEAL 455
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ + VT+N L++G + ++ E M +L+ M C P+ +Y ++ GL+ + P
Sbjct: 456 ARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLP 515
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A + M + +F + L GL +D ++M +GF + +
Sbjct: 516 DALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAI 575
Query: 381 GCVT 384
C++
Sbjct: 576 HCLS 579
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 100/239 (41%), Gaps = 41/239 (17%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF--SDGFFYNVIKIYGNMAGRISK 146
PN YT++ + L + +R D +++ E L R + YN + R+ +
Sbjct: 426 PNIYTYTILTHGLCKLRRLDRAKEMFN----EALARGLKPNRVTYNTLLNGYCRGSRLIE 481
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A++ L +M +C P T+ ++ LV + ++ G +++ LNIL +
Sbjct: 482 AMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILAR 541
Query: 207 GLCENGN-----------------------------------LEAAFYVLDEFPKQNCEP 231
GL GN +E A +L E + P
Sbjct: 542 GLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSP 601
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
N+ TY+T++ G C +G +++A +L M GI DT ++NILI QG+ ++ +L
Sbjct: 602 NLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQL 660
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EAF L++ M E DT ++L+S L K K++ L +M G N+ +Y ++
Sbjct: 272 EAFNLMKEMGYEPGLIDTAYNSVLVS-LVKNKKLDMAENLFAQMINNGVSCNNLTYTSMI 330
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
K++ +A +L+ MI +P V+Y +I LC +K++E VL+KM + G
Sbjct: 331 QCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCE 390
Query: 371 PRMGMWREIV 380
P + + ++
Sbjct: 391 PNIYTYNALI 400
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 158/353 (44%), Gaps = 22/353 (6%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L V +I + +D SVI SKR Y N + ++N+L + + F + I
Sbjct: 73 LKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI-- 130
Query: 116 RIKVEKLCRFSD---------------GFFY-----NVIKIYGNMAGRISKAIETLFDMP 155
RI + K CR + GF + N + I + A M
Sbjct: 131 RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML 190
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
+ PS+ TFN ++N+L E + I + + + D L+ G C N NL+
Sbjct: 191 NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLD 250
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
AF V D K+ C+PN TYSTL++GLC +G V+EA +LE M +GI+ T+ + I
Sbjct: 251 LAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 310
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+ L EE ++L+ RMK +GC PN +Y ++ GL + A L +M+ E +
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
P+ V+Y LI+ LC + M G + + EI+ + G D
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 423
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 153/319 (47%), Gaps = 9/319 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K++ PN YT +I+ L++ + + + ++ E L + YN + + G
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL--VPNTVTYNALINELCVGG 387
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDAC 199
R S A++ M + + +T+N ++ L L G+I+ ++ K+G
Sbjct: 388 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLC---LGGDIEKAMVLFEKMLKMGPLPTVV 444
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ G GN+ A +LD + CEP+ TY+ L+ G + G +E A + M
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G++ + V++ LI G K GKV+ + LL+RM+ GC PN SY V+ GL + RF
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA+++ +M+ + + P+ ++Y LI GLC + + M ++ +P + + +
Sbjct: 565 SEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624
Query: 380 V-GCVTFGKDNRNRVYVTE 397
+ G GK + + + E
Sbjct: 625 IYGLCQEGKADEAEILLKE 643
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 100/185 (54%), Gaps = 6/185 (3%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ A+ L M C P+V+++N V+N L + E + I + G+ +
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITY 586
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC NG + AF + + K+ C PN+ TYS+L++GLC++G +EA LL+ ME
Sbjct: 587 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMER 646
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG------LLD 315
+G+ D VTF LI G G+++ LL RM GC PN +Y +L G LL+
Sbjct: 647 KGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLE 706
Query: 316 KKRFP 320
+K FP
Sbjct: 707 EKIFP 711
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 143/314 (45%), Gaps = 5/314 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +IN L++ + E I+ +I L D F Y + I G+ R
Sbjct: 196 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLS--PDVFTYTSL-ILGHCRNRNLDLA 252
Query: 149 ETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+FD M C P+ T++ ++N L + E + + G+E + +
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC + E A ++ K+ C PNV+TY+ L+ GL G +E A GL +M EG+ +
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TVT+N LI+ L G+ +K+ M+G G N+ +Y E++ GL +A L
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
+M+ P+ V+Y LI+G + V + +L M + G P + E+V G +G
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492
Query: 387 KDNRNRVYVTETVD 400
K Y E V+
Sbjct: 493 KLESASFYFQEMVE 506
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 141/318 (44%), Gaps = 37/318 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +IN+L RF I + E ++ YN I + G I KA+
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWM--EGHGSLANTQTYNEIIKGLCLGGDIEKAM 428
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVS-------AKL---------------YGEIQGIY 186
M P+V T+N ++N ++ A+L Y E+ +
Sbjct: 429 VLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF 488
Query: 187 TSAAKLGV------EIDACCLN-------ILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ KL E+ C LN L+ G ++G ++ A +L + C PNV
Sbjct: 489 SKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNV 548
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+Y+ +++GL ++ EA + ++M +G+ + +T+ LI GL + G+ + K+
Sbjct: 549 ESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD 608
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M+ + C PN +Y ++YGL + + EA+ L+ M + ++P V++ LI G
Sbjct: 609 MEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGR 668
Query: 354 VEDVDWVLKKMVQQGFVP 371
++ +L++MV G P
Sbjct: 669 IDHAFLLLRRMVDMGCKP 686
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 134/304 (44%), Gaps = 6/304 (1%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
+R+ ++S + QY D +P+ YT +I + + D + R+ V++ C +
Sbjct: 214 VREAELILSQIFQY----DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM-VKEGCDPNS 268
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+ +I N GR+ +A++ L +M P+V T+ L + L + + E +
Sbjct: 269 VTYSTLINGLCN-EGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVA 327
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
K G + L+ GL G LE A + + K+ PN TY+ L++ LC G
Sbjct: 328 RMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 387
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
A + ME G A+T T+N +I GL G +E+ M L E+M G P +Y
Sbjct: 388 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 447
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G L K A L+ M P +Y +L+ G +E + ++MV+
Sbjct: 448 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 507
Query: 368 GFVP 371
G P
Sbjct: 508 GLNP 511
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 162/382 (42%), Gaps = 75/382 (19%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI------------ 117
D S + V NQ +K + PN Y+ +IN L + R + D+++ +
Sbjct: 435 DLDSALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTC 493
Query: 118 --KVEKLCRFSDGFFYNVIKIYGNM---------------------AGRISKAIETLFDM 154
+ LC G + + +++ +M +G + AI M
Sbjct: 494 TGPIIALCDM--GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 551
Query: 155 PSYNCWPSVKTFNLVLNLLVSAK----------LYGEIQGIYTSAAKLGVEIDACCL--- 201
+P+ T+N ++N+LV + L G G++T+ I C+
Sbjct: 552 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR-NGLFTNIVTYNEMIKGYCILGD 610
Query: 202 -----------------------NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
N ++KG C++GN +A +LD C+P+ +Y+
Sbjct: 611 PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTE 670
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+ G C+ +E AFGL M +G+ + VT+ LI G K K++ LLE MK G
Sbjct: 671 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 730
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C PN +Y +++GL + F A+EL MI E + P+ V+Y +I GLC
Sbjct: 731 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 790
Query: 359 WVLKKMVQQGFVPRMGMWREIV 380
+ KM++QG +P + + ++
Sbjct: 791 EMFNKMIEQGCLPNLLTYSSLI 812
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F Y+ + I+ + G + ++ M S P++ +N V+N L + + I
Sbjct: 351 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 410
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ + D ++ G C +L++A V ++ K+ CEPN TYSTL++GLC+ G
Sbjct: 411 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 470
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V EAF L+ M GI T I L G E+ +L MK KGC PN +Y
Sbjct: 471 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 530
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ GL A L RM + + P+ V+Y LI+ L + ++ VL M + G
Sbjct: 531 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 590
Query: 369 FVPRMGMWREIV 380
+ + E++
Sbjct: 591 LFTNIVTYNEMI 602
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTS 188
+ +IK Y + +G + A+ L M C P ++ L+ +K+ G++
Sbjct: 633 YNTIIKGYCD-SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF-GLFNE 690
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+ + L+ G C++ L+ A +L+ + C PNV+TY+ L+HGL ++ N
Sbjct: 691 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 750
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
A L + M EGI + VT+ +I GL K G +++ +M +GC PN +Y
Sbjct: 751 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 810
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ L + + EA+ L + + P ++Y K+I VE L +M++ G
Sbjct: 811 LIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 870
Query: 369 FVPRM 373
P +
Sbjct: 871 CQPTL 875
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 2/225 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+E YT +I + + ++ + + + LC ++ + +I Y ++ A
Sbjct: 663 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP-NEVTYTALIDGYCK-DEKLDTAT 720
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M C P+V+T+N++++ L + + + + G+ + ++ GL
Sbjct: 721 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 780
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+NG+ A + ++ +Q C PN+ TYS+L+ L ++G VEEA L +E G+ D
Sbjct: 781 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 840
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+T+ +I GKVE L RM GC P +Y ++ GL
Sbjct: 841 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 885
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 132/297 (44%), Gaps = 3/297 (1%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E++K + L DP + V+N +R ++ N Y II + + I+ ++
Sbjct: 600 EMIKGYCILGDPKKAMLVMNNMLQR-GHSANLVTYNTIIKGYCDSGNTTSALRILDLMR- 657
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
+ C+ + + +I + ++ ++ A +M P+ T+ +++ +
Sbjct: 658 DGGCKPDEWSYTELICGFCKIS-KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 716
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ + G + N+L+ GL + N A + ++ PNV TY+ +
Sbjct: 717 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 776
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ GLC+ G+ A + +M +G + +T++ LI L ++GKVEE L ++ G
Sbjct: 777 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 836
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
P+ +Y +++ + + A +GRMI P+ +Y LI GL N+ L+ D
Sbjct: 837 IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 893
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 15/261 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY-NVIKIYGNMAGRISKA 147
PN Y+ +I L Q + + E++ ++ L D Y +I+ Y M+G++ A
Sbjct: 803 PNLLTYSSLIRALGQEGKVEEAENLFAELERHGL--IPDEITYVKMIEAY-IMSGKVEHA 859
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L M C P++ T+ +++ L + L + + A L + C
Sbjct: 860 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR-----LAALPDVVPNCSFGY---- 910
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ + +A + + + + +V+ + L+ L G EA LL M S+G+ D
Sbjct: 911 --QTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 968
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+N L+ L + V+ M + + M +GC + Y+E++ L R EA+
Sbjct: 969 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 1028
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M+ +P V LI GL
Sbjct: 1029 NMLMRTWNPDDVVQAVLIDGL 1049
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
SV+ N +++ L +A + E + S G+ D N LL L N++ A V
Sbjct: 933 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 992
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
Q CE ++ Y L+ LC+ +EA E M + D V +LI GL +
Sbjct: 993 KHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRD 1052
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
G + M+ L M+ + P+ Y +L KKR
Sbjct: 1053 GYKDLCMEFLHIMETRRYMPSFHIYT-ILAREASKKR 1088
>gi|255555093|ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542429|gb|EEF43971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 377
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 152/304 (50%), Gaps = 11/304 (3%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD----GFFYNVIKIY 137
S+ ++ Y+ I+ +L+ AK+F +ED ++ K F+D F +I +Y
Sbjct: 46 SESPEFRARHRFYSTIVRRLSFAKQFSMVEDFLEHQK-----NFADITNEQFTIRLISLY 100
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS-AAKLGVEI 196
G AG + A +MP C +V++FN +L+ + + + ++QG KLG+
Sbjct: 101 GK-AGMLDHAHRLFDEMPDLKCTRTVRSFNALLSACIDSGKFDKVQGFLRDFPVKLGITP 159
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D NI++KG CE GNL++ VL E K+ EP++ T++TL++G G + +
Sbjct: 160 DVVSFNIVIKGYCEIGNLDSGVLVLCEMEKRGIEPDLITFNTLLNGFYGNGRFVDGEKIW 219
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
MES+ + + ++N + GL + +V E ++LL M+ KG P+ SY V+ GL +
Sbjct: 220 TLMESKNVVPNVRSYNSRLRGLELENRVMEAVELLGEMENKGIRPDVMSYNAVIKGLCND 279
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ E K ++ P V+Y LI L + ++ + +++ +G + ++
Sbjct: 280 ENVEEVKNWYRKLKENGRMPDRVTYMTLIPYLRQKGDLDGAVELCIEIMNKGLLVNATLF 339
Query: 377 REIV 380
+ +V
Sbjct: 340 QHVV 343
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 99/250 (39%), Gaps = 43/250 (17%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKAIETLF 152
+ +++ + +FD ++ ++ V KL D +N VIK Y + G + + L
Sbjct: 128 FNALLSACIDSGKFDKVQGFLRDFPV-KLGITPDVVSFNIVIKGYCEI-GNLDSGVLVLC 185
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M P + TFN +LN + + + I+T V + N L+GL
Sbjct: 186 EMEKRGIEPDLITFNTLLNGFYGNGRFVDGEKIWTLMESKNVVPNVRSYNSRLRGLELEN 245
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+ A +L E + P+V +Y+ ++ GLC NVEE +++ G D VT+
Sbjct: 246 RVMEAVELLGEMENKGIRPDVMSYNAVIKGLCNDENVEEVKNWYRKLKENGRMPDRVTYM 305
Query: 273 ILISGLRKQG-----------------------------------KVEEGMKLLERMKGK 297
LI LR++G +VEE L+ER K
Sbjct: 306 TLIPYLRQKGDLDGAVELCIEIMNKGLLVNATLFQHVVDELVKLSRVEEAKDLVERGKS- 364
Query: 298 GCYPNSASYQ 307
N SY+
Sbjct: 365 ----NKHSYK 370
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 119/230 (51%), Gaps = 2/230 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +S+A++ + S C P FN++++ L A E + + ++ G+ D
Sbjct: 154 GNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTY 211
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC++ +E A +L+ K+ PN+ TY+TL++G C+ G A L+ERM
Sbjct: 212 NSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQ 271
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D VTFN LISG ++ K+++ ++L MK C PN +Y ++ GL D R E
Sbjct: 272 SGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANE 331
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A EL+ M + P ++Y LI C +E + MV++G +P
Sbjct: 332 ACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIP 381
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 130/292 (44%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ L+ ++++ L +A + +++ + + D YN + + R+ +A
Sbjct: 171 PDSVLFNILVHGLCKANQLSEARQMIEEMSERGI--VPDVVTYNSLIDGLCKSYRMEEAR 228
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L M P++ T+N ++ G + + G D N L+ G
Sbjct: 229 QLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGF 288
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ ++ A VL K C PN+ TY+ L+ GLC+ G EA LL M+ GI D
Sbjct: 289 CQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDI 348
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+N LI + ++E+ ++ M +G P+ SY + LL +RF EA L+
Sbjct: 349 ITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDN 408
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M P+ ++ L+ GLC + +++ +L M + G P + +V
Sbjct: 409 MFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLV 460
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 2/241 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + +A + L +M P V T + ++ L + + + + D+
Sbjct: 118 AGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAP--DSVL 175
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ GLC+ L A +++E ++ P+V TY++L+ GLC+ +EEA LLE M
Sbjct: 176 FNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMV 235
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ + VT+N LI G K G +L+ERM G +P+ ++ ++ G K +
Sbjct: 236 KRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKID 295
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A E++ M +P+ V+Y LI GLC+ + +L +M +G +P + + ++
Sbjct: 296 KACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLI 355
Query: 381 G 381
G
Sbjct: 356 G 356
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 34/213 (15%)
Query: 202 NILLKGLCENGNLEAAFYVL-DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N LL+ L + A+ + DE Q+C+ N TY+TL+ G C+ G++E AF LL M+
Sbjct: 73 NCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMK 132
Query: 261 SEGIDADTVT---------------------------------FNILISGLRKQGKVEEG 287
G D VT FNIL+ GL K ++ E
Sbjct: 133 ERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQLSEA 192
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+++E M +G P+ +Y ++ GL R EA++L+ M+ ++ P+ V+Y LI+G
Sbjct: 193 RQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYG 252
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C ++++M+Q G P + + ++
Sbjct: 253 YCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLI 285
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 12/297 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG----NMAGRI 144
P+ Y +I+ L ++ R + +++ + K+ + YN + IYG G
Sbjct: 206 PDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKV--RPNLVTYNTL-IYGYCKTGCTGLA 262
Query: 145 SKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ IE + ++ P V TFN L+ +K+ + ++ L + N+
Sbjct: 263 HQLIERMIQSGTH---PDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAP-NLVTYNV 318
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+ G A +L E + P++ TY++L+ C +E+AF + M G
Sbjct: 319 LISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERG 378
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D +++ L L K + +E LL+ M G PN ++ ++ GL +R EA+
Sbjct: 379 VIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEAR 438
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ M P+ +Y+ L+ GLC V+D VL MV +G P + IV
Sbjct: 439 HLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIV 495
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+I KA E L M C P++ T+N++++ L A E + + G+ D N
Sbjct: 293 KIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYN 352
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ C N +E AF + + ++ P+ +Y TL L + +EAF LL+ M
Sbjct: 353 SLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDA 412
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + TFN L+ GL +++E LL M+ GC P +++Y+ ++ GL R +A
Sbjct: 413 GAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDA 472
Query: 323 KELVGRMICERMSPSFVSYKKLIHGL 348
KE++ M+ E + P S ++H L
Sbjct: 473 KEVLVMMVSEGIQPLVSSSGTIVHTL 498
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 2/258 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ + +I+ Q + D +++ +K + LC + YNV+ AGR ++A
Sbjct: 275 HPDVVTFNSLISGFCQKSKIDKACEVLHLMK-KGLCA-PNLVTYNVLISGLCDAGRANEA 332
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L +M P + T+N ++ + + I + GV D L
Sbjct: 333 CELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVA 392
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L ++ + AF +LD PN+ T+++LM GLC ++EA LL M G D
Sbjct: 393 LLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPA 452
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+ +L++GL K G+V++ ++L M +G P +S +++ L + + A
Sbjct: 453 ASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFD 512
Query: 328 RMICERMSPSFVSYKKLI 345
+++ SY+KL+
Sbjct: 513 QVVAAESKACDPSYQKLL 530
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 2/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN YT++I L + FD + I+ + + L YN + G
Sbjct: 338 KHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGL--IPSVVTYNALIDGYCKKGLS 395
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ A+E L M S NC P+ +T+N ++ K + + + ++ + NIL
Sbjct: 396 ASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNIL 455
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C+ G+L +A+ +L + P+ TYS + LC++G VEEA L E ++ +GI
Sbjct: 456 IHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
A+ V ++ LI G K GKV +G LL++M GC PNS +Y ++ G +K F EA+
Sbjct: 516 KANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARL 575
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LV MI + P+ +Y LI L + + +M+ G P + ++ +
Sbjct: 576 LVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFI 631
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 2/291 (0%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
NE YT +I+ +A+R D + ++ E C + Y VI GR ++A+
Sbjct: 273 NEVSYTNLIHGFCEARRVDEALKLFSQMH-EDNC-WPTVRTYTVIIFALCQLGRKTEALN 330
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+M +C P+V T+ +++ L + + + I + G+ N L+ G C
Sbjct: 331 MFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYC 390
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G +A +L NC PN RTY+ L+ G C N+ +A LL +M + + V
Sbjct: 391 KKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVV 450
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+NILI G K+G + KLL M G P+ +Y + L + EA+ L +
Sbjct: 451 TYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESL 510
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + V Y LI G C V D ++L KM+ G VP + ++
Sbjct: 511 KEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLI 561
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 175/417 (41%), Gaps = 40/417 (9%)
Query: 3 LRSHFARNHR-----QSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLS 57
LR F+ HR S+ QS S I + L+ P+ H N ++
Sbjct: 22 LRLTFSITHRFFTSPASLPQSFSVEHDIPAQLFSILSRPNWQK-----HPSLKNLIPSIA 76
Query: 58 PTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIIN--------------KLAQ 103
P+ + +F+ DP + ++ N ++ + N + ++N ++
Sbjct: 77 PSHISALFALNLDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAENMRILM 136
Query: 104 AKRFDAIEDIMQRIK-VEKLCRFSDGF-FYNVIKIYGNMAGRISK----------AIETL 151
K D+ E+ + ++ + + R D F F ++ Y + +S+ +E L
Sbjct: 137 IKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEML 196
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
DM + P++ T N ++N E + + + G+ +D L+ G C N
Sbjct: 197 DDMVT----PNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRN 252
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
N++AA + P + C N +Y+ L+HG CE V+EA L +M + T+
Sbjct: 253 KNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTY 312
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
++I L + G+ E + + + M K C PN +Y ++ L + F +AK+++ M+
Sbjct: 313 TVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLE 372
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
+ + PS V+Y LI G C + L +L M P + E++ GK+
Sbjct: 373 KGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKN 429
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 138/323 (42%), Gaps = 31/323 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+E Y++ I+ L + + + + +K EK + ++ + +I Y + G++S
Sbjct: 482 PDEWTYSVFIDTLCKRGLVEEARSLFESLK-EKGIKANEVIYSTLIDGYCKV-GKVSDGR 539
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M S C P+ T+N +++ K + E + + K +E A IL+ L
Sbjct: 540 FLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNL 599
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
++ + A + D+ P+V Y+ +H C G +++A L+ +M ++GI DT
Sbjct: 600 LKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDT 659
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK----------- 317
+ + + I + G ++ +L+RM GC P+ +Y ++ L + K
Sbjct: 660 MLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELS 719
Query: 318 ------------------RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
+ +L G+M +P+ +Y K I GLC +E
Sbjct: 720 DLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHR 779
Query: 360 VLKKMVQQGFVPRMGMWREIVGC 382
+ M ++G P ++ ++GC
Sbjct: 780 LFDHMKEKGQSPNEDIYNSLLGC 802
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 128/285 (44%), Gaps = 4/285 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISK 146
+PN Y +I + K ++ ++ KL + YN++ I+G G +
Sbjct: 411 SPNARTYNELILGFCRGKNIHKAMSLLHKMLERKL--QPNVVTYNIL-IHGQCKEGDLGS 467
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A + L M P T+++ ++ L L E + ++ S + G++ + + L+
Sbjct: 468 AYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLID 527
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+ G + ++LD+ C PN TY++L+ G C++ N +EA L++ M I+
Sbjct: 528 GYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEP 587
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
T+ ILI L K + ++ + ++M G +P+ Y ++ R +A+ L+
Sbjct: 588 AADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLI 647
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+M + + P + Y I ++ +LK+M + G P
Sbjct: 648 CKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEP 692
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 112/283 (39%), Gaps = 12/283 (4%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRISK 146
+P+ +YT I+ R E ++ ++ + + D Y + I YG G I
Sbjct: 621 HPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGI--MPDTMLYTLFIDAYGRF-GSIDG 677
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M C PS T++ ++ L +AK S GV +
Sbjct: 678 AFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASND------FS 731
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
+ E + + + C PN TY + GLC+ G +E A L + M+ +G
Sbjct: 732 NCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSP 791
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ +N L+ + G E ++ L+ M P+ S + +L GL D+ +AK +
Sbjct: 792 NEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVF 851
Query: 327 GRMI-CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ CE V +K LI GL + L + + M QG
Sbjct: 852 CSFLQCEYNYDEMV-WKVLIDGLLKKGLSDKCSDLFGIMETQG 893
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 144/298 (48%), Gaps = 2/298 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
KRK PN +Y II L + + E+ + + + D Y + G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI--LPDTVVYTTLIDGFCKRG 365
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
I A + ++M S + P V T+ +++ E ++ G+E D+
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G+++ AF V + + C PNV TY+TL+ GLC++G+++ A LL M
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + T+N +++GL K G +EE +KL+ + G ++ +Y ++ +A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+E++ M+ + + P+ V++ L++G C ++ED + +L M+ +G P + +V
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 137/290 (47%), Gaps = 12/290 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV--EKLCRFSDG---FFYNVIKIYGN 139
+D P+ YT II+ Q I D+++ K+ E C+ + F +I Y
Sbjct: 380 RDITPDVLTYTAIISGFCQ------IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
AG + A M C P+V T+ +++ L + K+G++ +
Sbjct: 434 -AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N ++ GLC++GN+E A ++ EF + TY+TLM C+ G +++A +L+ M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+G+ VTFN+L++G G +E+G KLL M KG PN+ ++ ++ +
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A + M + P +Y+ L+ G C + +++ ++ ++M +GF
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 35/261 (13%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN------------------- 171
YN++ + GRI +A L M P V +++ V+N
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 172 ---LLVSAKLYGEIQGIYTSAAKL-------------GVEIDACCLNILLKGLCENGNLE 215
L ++ +YG I G+ KL G+ D L+ G C+ G++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
AA E ++ P+V TY+ ++ G C+ G++ EA L M +G++ D+VTF LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+G K G +++ ++ M GC PN +Y ++ GL + A EL+ M +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 336 PSFVSYKKLIHGLCNQKLVED 356
P+ +Y +++GLC +E+
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEE 509
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 8/243 (3%)
Query: 144 ISKAIETLFDMP--SYNCWPS-VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV--EIDA 198
++ + FD+ +Y W S + F++ +LV L E + ++ G+ +D+
Sbjct: 153 VTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDS 212
Query: 199 CCLNILLKGLCENGNLEA-AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
C N+ L L ++ A A V EFP+ NV +Y+ ++H +C+ G ++EA LL
Sbjct: 213 C--NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 270
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
ME +G D ++++ +++G + G++++ KL+E MK KG PNS Y ++ L
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+ EA+E MI + + P V Y LI G C + + +M + P + +
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 378 EIV 380
I+
Sbjct: 391 AII 393
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 2/239 (0%)
Query: 143 RISKAIETLFDMPSYN-CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ + AI + P CW +V ++N+V++ + E + G D
Sbjct: 226 KTATAIIVFREFPEVGVCW-NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY 284
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ G C G L+ + +++ ++ +PN Y +++ LC + EA M
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI DTV + LI G K+G + K M + P+ +Y ++ G E
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +L M C+ + P V++ +LI+G C ++D V M+Q G P + + ++
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 116/242 (47%), Gaps = 2/242 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN YT +I+ L + D+ +++ ++ K+ + F YN I +G I +A
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLH--EMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ + + + T+ +++ + + Q I G++ N+L+ G
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C +G LE +L+ + PN T+++L+ C + N++ A + + M S G+ D
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+ L+ G K ++E L + MKGKG + ++Y ++ G L +K+F EA+E+
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 328 RM 329
+M
Sbjct: 691 QM 692
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 14/235 (5%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-------SAKLYGEIQGIYTSAAKLGV 194
G + A E L +M P++ T+N ++N L + KL GE + G+
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-------GL 522
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D L+ C++G ++ A +L E + +P + T++ LM+G C G +E+
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL M ++GI + TFN L+ + ++ + + M +G P+ +Y+ ++ G
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ EA L M + S S +Y LI G +K + V +M ++G
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
N + YT +++ ++ D ++I++ + + L F NV+ + G +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF--NVLMNGFCLHGMLEDG 580
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M + P+ TFN ++ IY GV D L+KG
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ N++ A+++ E + +V TYS L+ G ++ EA + ++M EG+ AD
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 268 TVTFNILISGLRKQGK 283
F+ S + +GK
Sbjct: 701 KEIFD-FFSDTKYKGK 715
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%), Gaps = 1/165 (0%)
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
F+ L + ++ + R + L + G + EA + E+M + G+ + N+ ++
Sbjct: 160 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR 219
Query: 278 LRKQG-KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
L K K + + G N ASY V++ + R EA L+ M + +P
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+SY +++G C ++ V +++ M ++G P ++ I+G
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 147/327 (44%), Gaps = 38/327 (11%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
+K+++Y + + Y +I+ L +++ + ++Q + +C + VI++ GN A
Sbjct: 114 AKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGN-A 172
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-VEIDACC 200
I KAI + + + C P+ + +N ++ +L+ Y ++ +Y + G D
Sbjct: 173 KMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVT 232
Query: 201 LNILLKGLC----------------ENG-------------------NLEAAFYVLDEFP 225
+ L+ C ENG N+ A + +E
Sbjct: 233 YSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMR 292
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
C P+V TY+ L+ GL + G ++EA+ M+ E DTV N +I+ L K G+++
Sbjct: 293 YMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLD 352
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLD-KKRFPEAKELVGRMICERMSPSFVSYKKL 344
+G+KL E M C PN +Y ++ L + K R E RM +SPS +Y L
Sbjct: 353 DGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSIL 412
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I G C +E +L++M ++GF P
Sbjct: 413 IDGFCKTNRIEKAMMLLEEMDEKGFPP 439
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 134/317 (42%), Gaps = 38/317 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +I L +A R D ++ E C+ N+I G AGR+ +
Sbjct: 298 PDVFTYTELIRGLGKAGRIDEAYHFYHEMQRED-CKPDTVVMNNMINFLGK-AGRLDDGL 355
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAK-LYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +M +C P+V T+N ++ L +K E+ + G+ +IL+ G
Sbjct: 356 KLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDG 415
Query: 208 LCENGNLEAAFYVLDE-----FP-----------------------------KQNC-EPN 232
C+ +E A +L+E FP K+NC +
Sbjct: 416 FCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS 475
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
R Y+ ++ L + G +++A L + M G + +N L+SGL + ++E + +
Sbjct: 476 ARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMR 535
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+M+ GC P+ SY +L GL A E++ M + P VSY ++ L +
Sbjct: 536 KMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAG 595
Query: 353 LVEDVDWVLKKMVQQGF 369
+ E+ ++K+M GF
Sbjct: 596 MFEEAAELMKEMNALGF 612
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 155/365 (42%), Gaps = 39/365 (10%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
V + N+ S +P+ Y+ +I+ + R D+ ++ +K E + + + +
Sbjct: 213 VHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMK-ENGMQPTAKIYTMI 271
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
I ++ + + A+ +M C P V T+ ++ L A E Y +
Sbjct: 272 ISLFFKL-DNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQRED 330
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE-KGNVEEA 252
+ D +N ++ L + G L+ + +E +C PNV TY+T++ L E K V E
Sbjct: 331 CKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEV 390
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
F ERM+ GI T++ILI G K ++E+ M LLE M KG P A+Y ++
Sbjct: 391 FSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDA 450
Query: 313 LLDKKRFPEAKEL-------------------------VGRM-----ICERMS-----PS 337
L KR+ A EL GR+ + + MS P+
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPN 510
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVT 396
+Y L+ GL ++++ ++KM + G +P + + I+ G G +R +T
Sbjct: 511 VYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLT 570
Query: 397 ETVDS 401
+S
Sbjct: 571 NMKNS 575
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 3/261 (1%)
Query: 89 PNEALYTLIINKLAQAK-RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN Y II L ++K R + +R+K + F Y+++ RI KA
Sbjct: 368 PNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGIS--PSPFTYSILIDGFCKTNRIEKA 425
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L +M P + +++ L AK Y ++ + A +++K
Sbjct: 426 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKH 485
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L + G L+ A + DE K C PNV Y+ LM GL ++EA + +M+ G D
Sbjct: 486 LGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPD 545
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++NI+++GL K G M++L MK P++ SY VL L F EA EL+
Sbjct: 546 INSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMK 605
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M ++Y ++ +
Sbjct: 606 EMNALGFEYDLITYSSILEAI 626
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 5/202 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P A Y +I+ L +AKR+D ++ Q +K + C S Y V+ + AGR+
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELK--ENCGSSSARVYAVMIKHLGKAGRL 492
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
AI +M C P+V +N +++ L A + E + G D NI+
Sbjct: 493 DDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNII 552
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GL + G A +L +P+ +Y+T++ L G EEA L++ M + G
Sbjct: 553 LNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGF 612
Query: 265 DADTVTFNILISGLRKQGKVEE 286
+ D +T++ ++ + GKV++
Sbjct: 613 EYDLITYSSILEAI---GKVDQ 631
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 146/303 (48%), Gaps = 2/303 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L + KRK PN +Y II L + + E+ + + + D Y +
Sbjct: 746 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI--LPDTVVYTTLIDG 803
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
G I A + ++M S + P V T+ +++ E ++ G+E D
Sbjct: 804 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 863
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+ L+ G C+ G+++ AF V + + C PNV TY+TL+ GLC++G+++ A LL
Sbjct: 864 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 923
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M G+ + T+N +++GL K G +EE +KL+ + G ++ +Y ++
Sbjct: 924 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 983
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+A+E++ M+ + + P+ V++ L++G C ++ED + +L M+ +G P +
Sbjct: 984 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 1043
Query: 378 EIV 380
+V
Sbjct: 1044 SLV 1046
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 137/290 (47%), Gaps = 12/290 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV--EKLCRFSDG---FFYNVIKIYGN 139
+D P+ YT II+ Q I D+++ K+ E C+ + F +I Y
Sbjct: 823 RDITPDVLTYTAIISGFCQ------IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 876
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
AG + A M C P+V T+ +++ L + K+G++ +
Sbjct: 877 -AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 935
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N ++ GLC++GN+E A ++ EF + TY+TLM C+ G +++A +L+ M
Sbjct: 936 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+G+ VTFN+L++G G +E+G KLL M KG PN+ ++ ++ +
Sbjct: 996 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 1055
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A + M + P +Y+ L+ G C + +++ ++ ++M +GF
Sbjct: 1056 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 1105
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 35/261 (13%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN------------------- 171
YN++ + GRI +A L M P V +++ V+N
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751
Query: 172 ---LLVSAKLYGEIQGIYTSAAKL-------------GVEIDACCLNILLKGLCENGNLE 215
L ++ +YG I G+ KL G+ D L+ G C+ G++
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
AA E ++ P+V TY+ ++ G C+ G++ EA L M +G++ D+VTF LI
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+G K G +++ ++ M GC PN +Y ++ GL + A EL+ M +
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Query: 336 PSFVSYKKLIHGLCNQKLVED 356
P+ +Y +++GLC +E+
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEE 952
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 8/243 (3%)
Query: 144 ISKAIETLFDMP--SYNCWPS-VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV--EIDA 198
++ + FD+ +Y W S + F++ +LV L E + ++ G+ +D+
Sbjct: 596 VTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDS 655
Query: 199 CCLNILLKGLCENGNLEA-AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
C N+ L L ++ A A V EFP+ NV +Y+ ++H +C+ G ++EA LL
Sbjct: 656 C--NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 713
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
ME +G D ++++ +++G + G++++ KL+E MK KG PNS Y ++ L
Sbjct: 714 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 773
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+ EA+E MI + + P V Y LI G C + + +M + P + +
Sbjct: 774 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833
Query: 378 EIV 380
I+
Sbjct: 834 AII 836
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 2/239 (0%)
Query: 143 RISKAIETLFDMPSYN-CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ + AI + P CW +V ++N+V++ + E + G D
Sbjct: 669 KTATAIIVFREFPEVGVCW-NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY 727
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ G C G L+ + +++ ++ +PN Y +++ LC + EA M
Sbjct: 728 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 787
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI DTV + LI G K+G + K M + P+ +Y ++ G E
Sbjct: 788 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 847
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +L M C+ + P V++ +LI+G C ++D V M+Q G P + + ++
Sbjct: 848 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 906
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 116/242 (47%), Gaps = 2/242 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN YT +I+ L + D+ +++ ++ K+ + F YN I +G I +A
Sbjct: 896 SPNVVTYTTLIDGLCKEGDLDSANELLH--EMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 953
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ + + + T+ +++ + + Q I G++ N+L+ G
Sbjct: 954 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C +G LE +L+ + PN T+++L+ C + N++ A + + M S G+ D
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 1073
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+ L+ G K ++E L + MKGKG + ++Y ++ G L +K+F EA+E+
Sbjct: 1074 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 1133
Query: 328 RM 329
+M
Sbjct: 1134 QM 1135
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 14/235 (5%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-------SAKLYGEIQGIYTSAAKLGV 194
G + A E L +M P++ T+N ++N L + KL GE + G+
Sbjct: 913 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-------GL 965
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D L+ C++G ++ A +L E + +P + T++ LM+G C G +E+
Sbjct: 966 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 1025
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL M ++GI + TFN L+ + ++ + + M +G P+ +Y+ ++ G
Sbjct: 1026 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 1085
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ EA L M + S S +Y LI G +K + V +M ++G
Sbjct: 1086 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
N + YT +++ ++ D ++I++ + + L F NV+ + G +
Sbjct: 966 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF--NVLMNGFCLHGMLEDG 1023
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M + P+ TFN ++ IY GV D L+KG
Sbjct: 1024 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 1083
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ N++ A+++ E + +V TYS L+ G ++ EA + ++M EG+ AD
Sbjct: 1084 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 1143
Query: 268 TVTFNILISGLRKQGK 283
F+ S + +GK
Sbjct: 1144 KEIFD-FFSDTKYKGK 1158
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%), Gaps = 1/165 (0%)
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
F+ L + ++ + R + L + G + EA + E+M + G+ + N+ ++
Sbjct: 603 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR 662
Query: 278 LRKQG-KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
L K K + + G N ASY V++ + R EA L+ M + +P
Sbjct: 663 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 722
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+SY +++G C ++ V +++ M ++G P ++ I+G
Sbjct: 723 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 767
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 2/276 (0%)
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
LII KL + F+ ++Q +K + + S F +I+ Y AG KA+E+ M
Sbjct: 98 LIIGKLIKENAFELYWKVLQELKNSAI-KISSEAFSVLIEAYSE-AGMDEKAVESFGLMR 155
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
++C P + FNL+L+ LV + + +Y K + D IL+ GLC+ +
Sbjct: 156 DFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A + DE + PN YS ++ GLC+ + +A L +M + G + D +T+N+L+
Sbjct: 216 DALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLL 275
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+G K G +++ LL+ + G Y ++ GL +R+ EA +M+ E +
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P + Y +I GL + V + +L +M ++G P
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRP 371
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 16/249 (6%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+++L + ++R P+ Y +I D E + R+++ K F + Y+++
Sbjct: 358 LTLLGEMTER-GLRPDTICYNALIKGFCDMGYLDEAESL--RLEISKHDCFPNNHTYSIL 414
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK-------LYGEIQGIYT 187
G I+KA +M C PSV TFN ++N L A L+ +++ +
Sbjct: 415 ICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRK 474
Query: 188 SAAKLGVE------IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
+ L + D L ++++ LCE+G + A+ +L + P++RTY+ L++
Sbjct: 475 PSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILIN 534
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
G C+ GN+ AF L + M+ +G D+VT+ LI GL + G+ E+ +++ E+M KGC P
Sbjct: 535 GFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVP 594
Query: 302 NSASYQEVL 310
S++Y+ ++
Sbjct: 595 ESSTYKTIM 603
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 6/250 (2%)
Query: 137 YGNMAGRISKAIET-----LFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YG + + K +T LFD M P+ +++VL+ L AK + Q +++
Sbjct: 201 YGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMR 260
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G D N+LL G C++G L+ AF +L K V Y L++GL E
Sbjct: 261 ASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYE 320
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA ++M E I D + + I+I GL ++G+V E + LL M +G P++ Y ++
Sbjct: 321 EAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALI 380
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
G D EA+ L + P+ +Y LI G+C L+ + K+M + G +
Sbjct: 381 KGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCL 440
Query: 371 PRMGMWREIV 380
P + + ++
Sbjct: 441 PSVVTFNSLI 450
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 138/282 (48%), Gaps = 17/282 (6%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAG 142
R++ P+ LYT++I L+Q R ++ + E+ R D YN +IK + +M G
Sbjct: 331 RENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEM-TERGLR-PDTICYNALIKGFCDM-G 387
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ +A ++ ++C+P+ T+++++ + L + Q I+ KLG N
Sbjct: 388 YLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFN 447
Query: 203 ILLKGLCENGNLEAA---FYVLDEFPK--------QNCEP--NVRTYSTLMHGLCEKGNV 249
L+ GLC+ LE A FY ++ K Q + ++ + +M LCE G +
Sbjct: 448 SLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMI 507
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+A+ LL ++ G+ D T+NILI+G K G + KL + M+ KG P+S +Y +
Sbjct: 508 LKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTL 567
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ GL R +A E+ +M+ + P +YK ++ C +
Sbjct: 568 IDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRE 609
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 137/300 (45%), Gaps = 15/300 (5%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y +IN L +A+R++ Q++ E + D Y ++ + GR+++A+ L +
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENI--KPDVMLYTIMIRGLSQEGRVTEALTLLGE 363
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P +N ++ E + + +K + +IL+ G+C+NG
Sbjct: 364 MTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGL 423
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-----------SE 262
+ A ++ E K C P+V T+++L++GLC+ +EEA L +ME S+
Sbjct: 424 INKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQ 483
Query: 263 GIDA--DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G D D + +++ L + G + + KLL ++ G P+ +Y ++ G
Sbjct: 484 GTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNIN 543
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +L M + P V+Y LI GL ED + ++MV++G VP ++ I+
Sbjct: 544 GAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIM 603
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 141/329 (42%), Gaps = 46/329 (13%)
Query: 89 PNEALYTLIINKLAQAKR-FDAI-------------EDIMQRIKVEKLCR---FSDGF-F 130
PN+ +Y+++++ L QAK+ FDA + I + + C+ D F
Sbjct: 231 PNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTL 290
Query: 131 YNVIKIYGNMAGRISKA--IETLFDMPSY-------------NCWPSVKTFNLVLNLLVS 175
++ G++ G I I LF Y N P V + +++ L
Sbjct: 291 LQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQ 350
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
E + + G+ D C N L+KG C+ G L+ A + E K +C PN T
Sbjct: 351 EGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHT 410
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM- 294
YS L+ G+C+ G + +A + + ME G VTFN LI+GL K ++EE L +M
Sbjct: 411 YSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470
Query: 295 ------------KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+G + AS Q ++ L + +A +L+ +++ + P +Y
Sbjct: 471 IVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYN 530
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
LI+G C + + K+M +G +P
Sbjct: 531 ILINGFCKFGNINGAFKLFKEMQLKGHMP 559
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
+Q + SA K+ E ++L++ E G E A +C+P++ ++ ++H
Sbjct: 116 LQELKNSAIKISSE----AFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILH 171
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
L K A + +M ++ D VT+ ILI GL K K ++ + L + M +G P
Sbjct: 172 FLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILP 231
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N Y VL GL K+ +A+ L +M + ++Y L++G C ++D +L
Sbjct: 232 NQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLL 291
Query: 362 KKMVQQGFVPRMGMWREIVGCVTFG 386
+ + + G I+G + +G
Sbjct: 292 QLLTKDG---------HILGVIGYG 307
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 122/294 (41%), Gaps = 35/294 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK----LCRFSDGF--FYNVIKIYGNM-- 140
P+ + +IN L +A R + + ++++ + R S G +++ + M
Sbjct: 441 PSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMER 500
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GV 194
+G I KA + L + P ++T+N+++N +G I G + ++ G
Sbjct: 501 LCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCK---FGNINGAFKLFKEMQLKGH 557
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D+ L+ GL G E A + ++ K+ C P TY T+M C + N+ A
Sbjct: 558 MPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALS 617
Query: 255 LLERM-------ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+ + E E + +F+ +++ ++ L M K + A Y
Sbjct: 618 VWMKYLRDFRGWEDEKVRVVAESFD--------NEELQTAIRRLLEMDIKSKNFDLAPYT 669
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
L GL+ KR EA + + +M+ S S LI LC +VE++D +
Sbjct: 670 IFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLC---MVENLDMAM 720
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 145/300 (48%), Gaps = 5/300 (1%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
NLRD + V V+ SK PN Y+++I+ L + R + + ++ EK C+ S
Sbjct: 245 NLRDALKVFDVM---SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG-EKGCQPS 300
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+ +IK + G I KA +M C P+V T+ ++++ L E G+
Sbjct: 301 TRTYTVLIKALCD-RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
K + N L+ G C++G + AF +L K+ C+PNVRT++ LM GLC
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G +A LL+RM G+ D V++N+LI GL ++G + KLL M P+ ++
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ + + A +G M+ + +S V+ LI G+C D ++L+ +V+
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 108/212 (50%), Gaps = 10/212 (4%)
Query: 186 YTSAA--------KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTY 236
YT AA K+G +D+ LL G C NL A V D K+ C PN +Y
Sbjct: 210 YTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSY 269
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
S L+HGLCE G +EEAFGL ++M +G T T+ +LI L +G +++ L + M
Sbjct: 270 SILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP 329
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+GC PN +Y ++ GL + EA + +M+ +R+ PS ++Y LI+G C V
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389
Query: 357 VDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
+L M ++ P + + E++ G GK
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 136/301 (45%), Gaps = 5/301 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN YT++I+ L + + + + +++ +++ F YN + GR+ A
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI--FPSVITYNALINGYCKDGRVVPAF 391
Query: 149 ETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L M C P+V+TFN L+ L K Y + + G+ D N+L+ G
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH-LLKRMLDNGLSPDIVSYNVLIDG 450
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC G++ A+ +L + EP+ T++ +++ C++G + A L M +GI D
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT LI G+ K GK + + +LE + S +L L + E ++G
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
++ + PS V+Y L+ GL + +L+ M G +P + + I+ G FG
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 387 K 387
+
Sbjct: 631 R 631
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 9/243 (3%)
Query: 86 DYNPNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
D P+ +T IIN + + D A +M R + V K+ G
Sbjct: 471 DIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKV-----G 525
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A+ L + + + N++L++L E + KLG+
Sbjct: 526 KTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYT 585
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GL +G++ +F +L+ C PNV Y+ +++GLC+ G VEEA LL M+
Sbjct: 586 TLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS 645
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG-LLDKKRFPE 321
G+ + VT+ +++ G GK++ ++ + M +G N Y +L G +L +K
Sbjct: 646 GVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDN 705
Query: 322 AKE 324
++E
Sbjct: 706 SEE 708
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 121/281 (43%), Gaps = 21/281 (7%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G I+ + L M C P+V + +++N L E + + ++ GV +
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG--LCEKG--NVEEAFG-- 254
+++KG NG L+ A + ++ E N R YS+L+ G L +KG N EE+
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSD 713
Query: 255 -LLERMESEGIDADTVTFN-----------ILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
L + E I+ L++ L K+G+ +E L++ + +G +
Sbjct: 714 IALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE 773
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV-DWVL 361
A ++ KK+ + EL+ ++ PSF S+ +I GL + E + V+
Sbjct: 774 KA-MDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVM 832
Query: 362 KKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVDSL 402
+ + G V + G+ V C+ G + + V + VD L
Sbjct: 833 ELLTSNGVVEKSGVL-TYVECLMEGDETGDCSEVIDLVDQL 872
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 36/185 (19%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE------ 285
N YS+L+ L + A+ RME++G + + +++ L K G E
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 286 -----------------------------EGMKLLERM-KGKGCYPNSASYQEVLYGLLD 315
+ +K+ + M K C PNS SY +++GL +
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
R EA L +M + PS +Y LI LC++ L++ + +M+ +G P +
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 376 WREIV 380
+ ++
Sbjct: 339 YTVLI 343
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 115/220 (52%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M C P V T++ +++ L + E I++ G+ + N L++GLC
Sbjct: 36 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 95
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
A +L+E N PN+ T+S L++ C++GNV EA G+L+ M G++ + VT++
Sbjct: 96 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 155
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L++G Q +V E KL + M KGC P+ SY ++ G KR EAK+L MI +
Sbjct: 156 LMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 215
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
++P VSY LI GLC + + + K M+ G +P +
Sbjct: 216 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDL 255
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 140/290 (48%), Gaps = 4/290 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
P+ Y+ II+ L + +R + DI +K + + + F YN +I+ N + R +A
Sbjct: 43 PDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGIS--PNIFTYNSLIQGLCNFS-RWREA 99
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L +M S N P++ TF+L++N+ E +G+ + ++GVE + + L+ G
Sbjct: 100 SAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG 159
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ A + D + C+P+V +Y+ L++G C+ + EA L M +G+ D
Sbjct: 160 YSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPD 219
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V++N LI GL + G++ E L + M G P+ +Y +L G + +A L
Sbjct: 220 IVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFR 279
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
M + P+ V Y LI +C + +++ + ++ QG P M W+
Sbjct: 280 AMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWK 329
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 2/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ Y P+ YT IIN L + A + +++ E C+ D Y+ I R+
Sbjct: 4 RGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMG-EAGCQ-PDVVTYSTIIDSLCKDRRV 61
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
++A++ M + P++ T+N ++ L + + E + L + + ++L
Sbjct: 62 NEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLL 121
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ C+ GN+ A VL + EPNV TYS+LM+G + V EA L + M ++G
Sbjct: 122 INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGC 181
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D ++NILI+G K ++ E +L M +G P+ SY ++ GL R EA +
Sbjct: 182 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD 241
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L M+ P +Y L+ G C Q + + + M P M M+ ++
Sbjct: 242 LFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 297
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M + G D T+ +I+GL K G+ L ++M GC P+ +Y ++ L +R
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EA ++ M + +SP+ +Y LI GLCN + +L +M+ +P +
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNI 115
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 145/310 (46%), Gaps = 23/310 (7%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+L + +RK +P+ Y +IN + +F E++ E L R G + I
Sbjct: 277 LLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYD----EMLPR---GIIPSTITY 329
Query: 137 YGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ G R+ A + M + C P + TFN ++ AK + + +
Sbjct: 330 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 389
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ + L+ G C+ G+L AA +L E PNV T +TL+ GLC+ G +++
Sbjct: 390 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKD 449
Query: 252 AFGLLERMESE-----------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
A + + M+ G++ D T+NILISGL +GK E +L E M +G
Sbjct: 450 ALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 509
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P++ +Y V++GL + R EA ++ M + SP+ V++ LI+G C V+D +
Sbjct: 510 PDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 569
Query: 361 LKKMVQQGFV 370
+M ++G V
Sbjct: 570 FCEMGRRGIV 579
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 157/349 (44%), Gaps = 22/349 (6%)
Query: 53 KDWLSPTEV-----LKIFSNLRDPISVISVLNQYSKRKDYNPNEALY-----TLIINKLA 102
+D L P ++ + + D +S +++L + + PN ++ T +IN
Sbjct: 207 EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFC 266
Query: 103 QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPS 162
+ R+ + ++Q + +E+ D YN + G+ +A E +M PS
Sbjct: 267 SSGRWSEAQQLLQEM-LERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPS 325
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
T++ +++ + ++ A G D N L+ G C ++ +L
Sbjct: 326 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 385
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
E + N TY+TL+HG C+ G++ A LL+ M S G+ + VT N L+ GL G
Sbjct: 386 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNG 445
Query: 283 KVEEGMKLLERMKGK-----------GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
K+++ +++ + M+ G P+ +Y ++ GL+++ +F EA+EL M
Sbjct: 446 KLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 505
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P ++Y +IHGLC Q +++ + M + F P + + ++
Sbjct: 506 RGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 554
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 27/251 (10%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC-------RFSDGFFYNVIKIYGNMAG 142
N YT +I+ Q +A +D++Q + +C DG N G
Sbjct: 395 NTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDN---------G 445
Query: 143 RISKAIETLFDM-----------PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
++ A+E M P P V+T+N++++ L++ + E + +Y
Sbjct: 446 KLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 505
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ D N ++ GLC+ L+ A + D ++ PNV T++TL++G C+ G V++
Sbjct: 506 RGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 565
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
L M GI A+ +T+ LI G RK G + + + + M G YP++ + + +L
Sbjct: 566 GLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLT 625
Query: 312 GLLDKKRFPEA 322
GL K+ A
Sbjct: 626 GLWSKEELKRA 636
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 132/276 (47%), Gaps = 15/276 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K +P+ + +I +AKR D ++ + L ++ Y + I+G G
Sbjct: 355 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGL--VANTITYTTL-IHGFCQVGD 411
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-------SAKLYGEIQ----GIYTSAAKL 192
++ A + L +M S P+V T N +L+ L + +++ +Q I S
Sbjct: 412 LNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFN 471
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GVE D NIL+ GL G A + +E P + P+ TY++++HGLC++ ++EA
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ + M S+ + VTF LI+G K G+V++G++L M +G N+ +Y +++G
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
A ++ M+ + P ++ + ++ GL
Sbjct: 592 FRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGL 627
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ KLG + LL GLC + A LD F Q C+PNV T++TLM+GLC
Sbjct: 136 FGKITKLGFHPTVVTFSTLLHGLCVEDRISEA---LDLF-HQMCKPNVVTFTTLMNGLCR 191
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG-KGCYPNSA 304
+G V EA LL+RM +G+ + +T+ ++ G+ K G + LL +M+ PN
Sbjct: 192 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVV 251
Query: 305 SYQE-----VLYGLLDKKRFPEAKELVGRMI-CERMSPSFVSYKKLIHGLCNQKLVEDVD 358
+ ++ G R+ EA++L+ M+ +++SP V+Y LI+ + + +
Sbjct: 252 IWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAE 311
Query: 359 WVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
+ +M+ +G +P + ++ F K NR
Sbjct: 312 ELYDEMLPRGIIPSTITYSSMID--GFCKQNR 341
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 32/284 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +T ++N L + R ++ R+ DG N I YG + + K
Sbjct: 177 PNVVTFTTLMNGLCREGRVVEAVALLDRM-------LEDGLQPNQIT-YGTIVDGMCKMG 228
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+T+ LNLL + E+ I + +E C +N G
Sbjct: 229 DTVS----------------ALNLLRKME---EVSHIKPNVVIWPLERRTCMIN----GF 265
Query: 209 CENGNLEAAFYVLDE-FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C +G A +L E ++ P+V TY+ L++ ++G EA L + M GI
Sbjct: 266 CSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPS 325
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+T++ +I G KQ +++ + M KGC P+ ++ ++ G KR + +L+
Sbjct: 326 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 385
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + + ++Y LIHG C + +L++MV G P
Sbjct: 386 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCP 429
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G E LE A + + + P+V + LM + G ++ L +ME
Sbjct: 49 LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + +F IL+ K+ + ++ G +P ++ +L+GL + R EA
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+L +M C+ P+ V++ L++GLC + V + +L +M++ G P + IV
Sbjct: 169 DLFHQM-CK---PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIV 221
>gi|225466731|ref|XP_002268415.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g05600-like [Vitis vinifera]
Length = 503
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 167/371 (45%), Gaps = 57/371 (15%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQY-SKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
+L PT++ ++ ++P++ + + N+ SK +Y N +Y +IN L + R + ++
Sbjct: 8 FLIPTQLSQMIRTQKNPLTALKIFNEAKSKFPNYRHNGPVYATMINVLGSSGRIAEMREV 67
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ ++K + C D F +V+K Y AG + +A+ +P +NC +FN +L +L
Sbjct: 68 IDQMKQDS-CECKDSVFSSVMKTYAR-AGMVDEAVSLFKTLPQFNCVNWTGSFNTLLRIL 125
Query: 174 V-------SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
V + +L+ E + +++G LN+L+ LC+ + A +V E
Sbjct: 126 VKESKLETACRLFLEHSCGWEVKSRIGS------LNLLMDALCQINRSDLALHVFQEMRY 179
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEA----FGLLERMESEGIDADTVTFNILISGLRKQG 282
Q C P+ +Y LM GLCE G + EA + + R+ +G D + L+ L G
Sbjct: 180 QCCSPDKESYRILMRGLCEDGRLNEATHLLYSMFWRISQKGGGEDIAAYRTLLDALCDNG 239
Query: 283 KVEEGMKLL-----------------------------ERMKG-------KGCYPNSASY 306
VEE +++L ER KG +G P+ ASY
Sbjct: 240 HVEEALEILGKVLKKGLKAPKRCRGHLDLSYCCNGEDIERTKGLINEALIRGGVPSMASY 299
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK-KMV 365
+ L +++ EA +++ M PS Y+ I LC VE+ V+K +MV
Sbjct: 300 SAMAIDLYSERKIGEANQVLDEMRDRGFKPSLSIYEAKIAALCRCGGVEEAVKVIKEEMV 359
Query: 366 QQGFVPRMGMW 376
+ VP + ++
Sbjct: 360 EDSCVPTVRLY 370
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL-ERMESEGIDADTVTFNILI 275
A VLDE + +P++ Y + LC G VEEA ++ E M + +NI++
Sbjct: 315 ANQVLDEMRDRGFKPSLSIYEAKIAALCRCGGVEEAVKVIKEEMVEDSCVPTVRLYNIVL 374
Query: 276 SGLRKQGKVEEGMKLLERMKGK-GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
GL ++GK + LE+M + GC + +Y ++ GL RF EA ++ RM+
Sbjct: 375 KGLCREGKSAFAVGYLEKMARQVGCVADKETYSILVDGLCCDGRFVEASGILERMLIRSS 434
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
SP +Y LI GLC D L++MV QG +P + +W +V V
Sbjct: 435 SPGVETYNTLIRGLCLMGRQYDAVIWLEEMVVQGKLPAVSVWDSLVASV 483
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ +++ + L S + GE + G + + LC G +E A V
Sbjct: 294 PSMASYSAMAIDLYSERKIGEANQVLDEMRDRGFKPSLSIYEAKIAALCRCGGVEEAVKV 353
Query: 221 L-DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE-GIDADTVTFNILISGL 278
+ +E + +C P VR Y+ ++ GLC +G A G LE+M + G AD T++IL+ GL
Sbjct: 354 IKEEMVEDSCVPTVRLYNIVLKGLCREGKSAFAVGYLEKMARQVGCVADKETYSILVDGL 413
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
G+ E +LERM + P +Y ++ GL R +A + M+ + P+
Sbjct: 414 CCDGRFVEASGILERMLIRSSSPGVETYNTLIRGLCLMGRQYDAVIWLEEMVVQGKLPAV 473
Query: 339 VSYKKLIHGLCN 350
+ L+ +C+
Sbjct: 474 SVWDSLVASVCS 485
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 142 GRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLV----SAKLYGEIQGIYTSAAKLGVEI 196
G + +A++ + + M +C P+V+ +N+VL L SA G ++ + A ++G
Sbjct: 345 GGVEEAVKVIKEEMVEDSCVPTVRLYNIVLKGLCREGKSAFAVGYLEKM---ARQVGCVA 401
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D +IL+ GLC +G A +L+ ++ P V TY+TL+ GLC G +A L
Sbjct: 402 DKETYSILVDGLCCDGRFVEASGILERMLIRSSSPGVETYNTLIRGLCLMGRQYDAVIWL 461
Query: 257 ERMESEG 263
E M +G
Sbjct: 462 EEMVVQG 468
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 152/298 (51%), Gaps = 3/298 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+ + +P+ ++ +I+ L++A F+A E + Q + L D YN + G
Sbjct: 282 KKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLS--PDVRTYNAMLSGLFRTG 339
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+++K E M NC ++ ++N+++ L+ K + + + G++ D+
Sbjct: 340 KLNKCFELWNVMSKNNCC-NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYG 398
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+L+ GLC+NG L A +L+E + + + YS+++HGLC+KG +E+A L+ +M+
Sbjct: 399 LLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKN 458
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
++ FN LI+G + K+EE + +L MK K C P SY ++ GL +RF +A
Sbjct: 459 RRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDA 518
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ M+ E + P ++Y LI GLC + V+ + + + + P + M I+
Sbjct: 519 YLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIII 576
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 160/339 (47%), Gaps = 7/339 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+SPT VLK+ ++P + +++ + + Y ++ I+ +L K + I+
Sbjct: 8 ISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVD 67
Query: 116 RIKVEKLCRFSDGFFYNVIKIYG--NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
++ ++ C S+ + IK Y +M + + + D+ + C P +++FN +LN
Sbjct: 68 LMRAQR-CTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDI--FGCNPGIRSFNSMLNAF 124
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ + + E + +T G+ + NIL+K C+ E +L + P++
Sbjct: 125 IESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDI 184
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+Y TL++ L + GN+ +A L + M G++ D + +NILI G ++G + ++ +R
Sbjct: 185 LSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKR 244
Query: 294 -MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+ YP+ +Y ++ GL + E+ E+ RM SP ++ +IHGL
Sbjct: 245 LLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAG 304
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNR 390
+ V ++M++ G P + + ++ G GK N+
Sbjct: 305 NFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNK 343
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 148/290 (51%), Gaps = 13/290 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P+ Y ++IN L + + D ++ R+K + + D F ++ + I+G + AG + A
Sbjct: 253 PSVETYNIMINGLCKLGKLDESMEMWNRMKKNE--KSPDLFTFSSM-IHGLSKAGNFNAA 309
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC----LNI 203
+ +M P V+T+N +L+ L + ++ +K + CC N+
Sbjct: 310 EKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSK-----NNCCNIVSYNM 364
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++GL +N +E A ++ + + TY L++GLC+ G + +A +LE E+EG
Sbjct: 365 LIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEG 424
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D DT ++ ++ GL K+G +E+ ++L+ +MK NS + ++ G + + EA
Sbjct: 425 ADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAI 484
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
++ M + +P+ VSY +I+GLC + D LK+M+++G P M
Sbjct: 485 SVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDM 534
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 125/259 (48%), Gaps = 2/259 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ +++ L + + +++ ++K + + + F ++I Y A ++ +AI L +
Sbjct: 432 YSSMVHGLCKKGMLEQAVELIHQMKKNRR-KLNSHVFNSLINGYVR-AFKLEEAISVLRE 489
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S +C P+V ++N ++N L A+ + + + G++ D ++L+ GLC
Sbjct: 490 MKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEK 549
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + + + +P+++ ++ ++HGLC V+ A + +M D VT N
Sbjct: 550 VDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNT 609
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
++ GL K G E +K+ +R+ G P+ SY GL R +A E + +
Sbjct: 610 IMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRG 669
Query: 334 MSPSFVSYKKLIHGLCNQK 352
+ P+ ++ L+ + + K
Sbjct: 670 ILPNAPTWNVLVRAVVDDK 688
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 4/289 (1%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
S + +L + RK P+ YT+II+ L + R D ++ + + ++ F YN
Sbjct: 248 SALDLLRKMEHRK-IKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGI--KANVFTYN 304
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ GR + L DM + P+V TF+ +++ LV E + +Y
Sbjct: 305 SLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITR 364
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+E + N L+ GLC + L+ A ++D + C+P++ TY+ L++G C+ V++
Sbjct: 365 GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDG 424
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L +M G+ ADTVT++ LI G + K+ K+ + M +G +P +Y +L G
Sbjct: 425 MRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDG 484
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
L D EA ++ +M +M Y +IHG+CN V+D W L
Sbjct: 485 LCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDA-WSL 532
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 4/285 (1%)
Query: 87 YNPNEALYTLIINKLA-QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
Y PN + ++N L + + F+A+E + + + + D N I + R+S
Sbjct: 156 YEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHV---PDLITLNTIVNGLCLKDRVS 212
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A++ + M + C P+ T+ +LN + + + ++ I++
Sbjct: 213 EAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIII 272
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC++G L+ A E + + NV TY++L+ C G ++ LL M + I
Sbjct: 273 DNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ VTF+ LI L K+GK+ E L M +G PN+ +Y ++YGL + KR EA ++
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQM 392
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ M+ + P +Y LI+G C K V+D + +KM +G +
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMI 437
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 119/232 (51%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ GR+ +A+E + M P + T N ++N L E + G + +
Sbjct: 172 LEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQF 231
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+L +C++GN +A +L + + +P+V TY+ ++ LC+ G +++A M
Sbjct: 232 TYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEM 291
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E++GI A+ T+N LI G+ ++G +LL M + PN ++ ++ L+ + +
Sbjct: 292 ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKL 351
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EAK+L MI + P+ ++Y LI+GLCN K +++ + ++ MV +G P
Sbjct: 352 TEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDP 403
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 1/228 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V FN + LL K Y + + G+ D LNI++ C L AF
Sbjct: 88 PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSA 147
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ + K EPN T++TL++GLC +G V EA L++ M D +T N +++GL
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCL 207
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+ +V E + L+ RM GC PN +Y +L + A +L+ +M ++ P V+
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC-VTFGK 387
Y +I LC ++D +M +G + + ++G +FG+
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGR 315
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ I+N L R D++ R+ C+ + F Y I +G + A+
Sbjct: 193 PDLITLNTIVNGLCLKDRVSEAVDLIARMMANG-CQ-PNQFTYGPILNRMCKSGNTASAL 250
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L M P V T+ ++++ L + ++ G++ + N L+
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSF 310
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G + +L + + PNV T+S L+ L ++G + EA L M + GI+ +T
Sbjct: 311 CSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNT 370
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+N LI GL +++E ++++ M KGC P+ +Y ++ G K+ + L +
Sbjct: 371 ITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRK 430
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M M V+Y LI G C + + V ++MV QG P
Sbjct: 431 MSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHP 473
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 130/282 (46%), Gaps = 4/282 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-RISKA 147
PN ++ +I+ L + + +D+ + + + YN + IYG R+ +A
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGI--EPNTITYNSL-IYGLCNDKRLDEA 389
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ + M S C P + T+N+++N AK + ++ + G+ D + L++G
Sbjct: 390 NQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQG 449
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C++ L A V E Q P + TY+ L+ GLC+ G +EEA G+L++M ++ D
Sbjct: 450 FCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELD 509
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+NI+I G+ KV++ L + KG + SY +L GL + EA L
Sbjct: 510 IGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFR 569
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+M + P +Y LI + ++++M + GF
Sbjct: 570 KMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGF 611
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 115/231 (49%), Gaps = 5/231 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +P+ Y ++IN +AK+ D + +++ + + +D Y+ + I G R
Sbjct: 399 KGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGM--IADTVTYSTL-IQGFCQSRK 455
Query: 145 SKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +F +M S P + T+ ++L+ L E GI K +E+D NI
Sbjct: 456 LIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNI 515
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G+C ++ A+ + P + + ++++Y+ ++ GLC++ ++ EA L +M+ +G
Sbjct: 516 IIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDG 575
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ D T+N LI + + ++L+E MK G + + AS +++ +L
Sbjct: 576 YEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCG-FSSDASTVKIVMDML 625
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 149/343 (43%), Gaps = 50/343 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGRISKA 147
P+ Y +IN A + +E+ ++ + KL + D YN I +AGR+ +A
Sbjct: 167 PDIVTYNTLIN--AGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEA 224
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L M +C P + TFN +L+ A + + + + D IL+ G
Sbjct: 225 AEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNG 281
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA- 266
LC G ++ AFY+L+E +Q P+V Y++L+ GLC+ G +EEA L++ M + I A
Sbjct: 282 LCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAE 341
Query: 267 -------------------------------------------DTVTFNILISGLRKQGK 283
D VT+N LI GL K +
Sbjct: 342 MVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANR 401
Query: 284 VEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKK 343
V E L + M GC+PN + V++GL R +A LV M +R +P+ V Y
Sbjct: 402 VREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTS 461
Query: 344 LIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
LI GLC ++D VL M QG +R+++ + G
Sbjct: 462 LIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHG 504
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 137/251 (54%), Gaps = 7/251 (2%)
Query: 134 IKIYGNM-AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
I I GN AG+ ++A+E L + ++ P V FN +++ L + ++ +
Sbjct: 67 ILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESS 126
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN--CEPNVRTYSTLMH-GLCEKGNV 249
V D N ++ GLC++GNLE A +L+E ++ P++ TY+TL++ G+C+ G+V
Sbjct: 127 RVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDV 186
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EEA +L+ M+ G D +T+N +I L G+V E ++L+ M C P+ ++ +
Sbjct: 187 EEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFNTL 243
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L G P A E++ M E + P ++Y L++GLC V+ ++L+++V+QG+
Sbjct: 244 LDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY 303
Query: 370 VPRMGMWREIV 380
+P + + +V
Sbjct: 304 IPDVIAYTSLV 314
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 6/222 (2%)
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
D+ C P++ TF +++ A + + V D N L+ GL ++G
Sbjct: 52 DLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDG 111
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA--DTVT 270
N + A + + P++ TY+T++ GLC+ GN+E+A LLE M G + D VT
Sbjct: 112 NPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVT 171
Query: 271 FNILI-SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+N LI +G+ K G VEE +++L+ MK G P+ +Y +++ L R EA E++ M
Sbjct: 172 YNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM 231
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
C SP V++ L+ G C ++ VL++M ++ +P
Sbjct: 232 SC---SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILP 270
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 3/205 (1%)
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
V ++N +L++LV + +Y G + IL++G C+ G A L
Sbjct: 27 VHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLR 86
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
+ + P+V ++ L+HGL + GN ++A L E MES ++ D T+N +ISGL K G
Sbjct: 87 ALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSG 146
Query: 283 KVEEGMKLLERM--KGKGCYPNSASYQEVL-YGLLDKKRFPEAKELVGRMICERMSPSFV 339
+E+ +LLE M +G P+ +Y ++ G+ EA E++ M +P +
Sbjct: 147 NLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVI 206
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y +IH LC V + +LK M
Sbjct: 207 TYNSIIHALCVAGRVVEAAEILKTM 231
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 139/315 (44%), Gaps = 36/315 (11%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSK---------------RKDYNPNEALYTLIINKLAQ 103
E+LK S D ++ ++L+ + K R++ P+ YT+++N L +
Sbjct: 225 AEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 284
Query: 104 AKR----FDAIEDIMQR----------IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
+ F +E+I+++ V+ LC+ G K+ M+ R E
Sbjct: 285 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK--SGEIEEAHKLVKEMSAR-----E 337
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
L +M S N P + T+N+VL L+ + + + G D N L+ GLC
Sbjct: 338 ILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLC 397
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ + A + DE C PN T +++ GLC G V++A+ L+ M + + V
Sbjct: 398 KANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVV 457
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+ LI GL K ++++ +L+ M+G+G + +Y++++ ++ R EA + M
Sbjct: 458 VYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEM 517
Query: 330 ICERMSPSFVSYKKL 344
+ P + K L
Sbjct: 518 VARGFLPDGSTSKTL 532
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 145/331 (43%), Gaps = 57/331 (17%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVE-KLCRFS---DGFFYNVIKIYGNMAGRI 144
P+ Y II+ L A R +I++ + L F+ DGF AG +
Sbjct: 203 PDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNTLLDGFC---------KAGML 253
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLL-------VSAKLYGEI--QG------IYTS- 188
+A+E L +M N P V T+ +++N L V+ L EI QG YTS
Sbjct: 254 PRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSL 313
Query: 189 ------------AAKLGVEIDA----------------CCLNILLKGLCENGNLEAAFYV 220
A KL E+ A NI+L GL ++G++ A +
Sbjct: 314 VDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSL 373
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ + + P+V TY+TL+ GLC+ V EA L + M S G + VT ++ GL +
Sbjct: 374 ISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCR 433
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+V++ L+ M K PN Y ++ GL R +A ++ M + ++ +
Sbjct: 434 VGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFA 493
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y+KLI + + V + + +MV +GF+P
Sbjct: 494 YRKLIVSMIHGGRVAEAMAMYDEMVARGFLP 524
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G + D N LL L ++G+ V + C PN+ T+ L+ G C+ G A
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L ++ + D FN LI GL K G ++ +KL E M+ P+ +Y V+ G
Sbjct: 82 LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141
Query: 313 LLDKKRFPEAKELVGRMI--CERMSPSFVSYKKLIH-GLCNQKLVEDVDWVLKKMVQQGF 369
L +A+EL+ MI + +P V+Y LI+ G+C VE+ +L M G
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201
Query: 370 VPRMGMWREIV 380
P + + I+
Sbjct: 202 APDVITYNSII 212
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 154/310 (49%), Gaps = 10/310 (3%)
Query: 64 IFSNLRDPISVISVLNQY-SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL 122
+ L D V+ L + + KD P+ YT +++ L +A +FD + +++ + + +
Sbjct: 50 LMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREM-IARG 108
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV----SAKL 178
C F +I G +A L D+ S F ++ L S +L
Sbjct: 109 CAPDTVTFSTLIDGLCKF-GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVEL 167
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
++ G+ + G N+++ G C+ +L++A+ +L+ ++ C PNV T++
Sbjct: 168 ASKVLGVVIAK---GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTI 224
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+ GLC+ V EA LLE+M + G + VT++ +I+GL KQG+V++ +L + M+ +
Sbjct: 225 LITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 284
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C PN ++ ++ GL KR EA++L RM +P ++Y LI GLC V++
Sbjct: 285 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 344
Query: 359 WVLKKMVQQG 368
+ + + + G
Sbjct: 345 QLFQTIPESG 354
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 158/351 (45%), Gaps = 51/351 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-----AGR 143
PN+ Y ++I + A D +++ +K S+GF N + M AGR
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMK-------SNGFEGNAVVHTTLMKGLCDAGR 59
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+E F + +C P V T+ +++ L A + E QG+ G D +
Sbjct: 60 VVEALEH-FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFST 118
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQN---------------CE------------------ 230
L+ GLC+ G+ E AF VL++ ++ C
Sbjct: 119 LIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAK 178
Query: 231 ---PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
P V ++ +++G C+ +++ A+ LLE M +G + TF ILI+GL K +V E
Sbjct: 179 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEA 238
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+LLE+M GC PN +Y V+ GL + + +A EL M P+ V++ LI G
Sbjct: 239 QQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDG 298
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRNRVYVT 396
LC K +E+ + +M + G P + + ++ C +F D +++ T
Sbjct: 299 LCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQT 349
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 145/321 (45%), Gaps = 41/321 (12%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P ++ L+IN +AK D+ +++ + +EK C + F + ++ A R+
Sbjct: 178 KGFTPTVLMFNLVINGFCKAKDLDSAYKLLE-VMIEKGC-VPNVFTFTILITGLCKANRV 235
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A + L M + C P+V T++ V+N
Sbjct: 236 GEAQQLLEKMVTGGCSPNVVTYSTVIN--------------------------------- 262
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
GLC+ G ++ A+ + ++NC PNV T++ L+ GLC+ +EEA L RM G
Sbjct: 263 --GLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGC 320
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC-YPNSASYQEVLYGLLDKKRFPEAK 323
D +T+N LI GL K +V+E +L + + G N+ +Y + +G R +A
Sbjct: 321 APDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADAC 380
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ ++ + SP +Y LI C +V ++++M +GF PR+ ++G +
Sbjct: 381 RIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGL 440
Query: 384 TFGKDNRNRVYVTETVDSLAS 404
G + + DS+A+
Sbjct: 441 FEGNHTERAI---QLFDSMAA 458
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 143/354 (40%), Gaps = 56/354 (15%)
Query: 77 VLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK 121
V+N + K KD + PN +T++I L +A R + +++++ V
Sbjct: 190 VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM-VTG 248
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
C + + VI G++ A E M NC P+V T N++++ L AK E
Sbjct: 249 GCSPNVVTYSTVINGLCKQ-GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 307
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP-NVRTYSTLM 240
+ +Y + G D N L+ GLC++ ++ AF + P+ N TYSTL
Sbjct: 308 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 367
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI------------------------- 275
HG G + +A + + +G D T+ LI
Sbjct: 368 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 427
Query: 276 ----------SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
GL + E ++L + M +GC ++ Y V+ G+ + +A +
Sbjct: 428 PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAV 487
Query: 326 VGRMICER---MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ ++I +R +PS + L+ LC +D +L KM ++GF + +
Sbjct: 488 LEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSY 541
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
C PN TY L+ G G+++ A LLE M+S G + + V L+ GL G+V E +
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ M K C P+ +Y +++ L +F EA+ ++ MI +P V++ LI GL
Sbjct: 65 EHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123
Query: 349 CNQKLVEDVDWVLKKMVQQGF 369
C E VL+ ++Q+G
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGM 144
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 3/221 (1%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S P V T + VL L ++ S A G DA N++++G+
Sbjct: 421 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 480
Query: 214 LEAAFYVLDEF---PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
A VL++ + P+ L+ LC+ G ++A LL +M G A +
Sbjct: 481 HNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSS 540
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+N L+SGL + + +E ++ E M G P ++ V+ L + +A ELV RM
Sbjct: 541 YNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMS 600
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P + LI G C + +L++M + G P
Sbjct: 601 KLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEP 641
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/342 (19%), Positives = 143/342 (41%), Gaps = 39/342 (11%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLC 123
L Q +R++ PN + ++I+ L +AKR + + R++ ++ LC
Sbjct: 276 LFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLC 335
Query: 124 R---FSDGF-FYNVIKIYGNMA----------------GRISKAIETLFDMPSYNCWPSV 163
+ + F + I G A GR++ A + P +
Sbjct: 336 KSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDL 395
Query: 164 KTF-NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
T+ +L+L +++ ++ + A+K G L+ +L GL E + E A + D
Sbjct: 396 ATYTSLILEYCKTSRAVEVVELVEEMASK-GFPPRVNTLSAVLGGLFEGNHTERAIQLFD 454
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM---ESEGIDADTVTFNILISGLR 279
+ C + Y+ ++ G+ +A +LE++ + + + L+ L
Sbjct: 455 SMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLC 514
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
+ G+ ++ +LL +M +G +SY +L GL +R+ EA ++ M+ +P
Sbjct: 515 QVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEIS 574
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ +I LC+ V+D ++++M + G P + ++G
Sbjct: 575 TVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIG 616
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS------DGFFYNVIKIYGNMAGRISK 146
+Y L++ +A+A + + +++++ ++ +F+ D ++ ++ GR
Sbjct: 467 IYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQV-----GRTDD 521
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A + L M +V ++N +L+ L + + E ++ + G + +N+++
Sbjct: 522 AKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVIS 581
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC ++ A+ ++ K C P++ T +TL+ G C+ G + A LLE M G++
Sbjct: 582 WLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEP 641
Query: 267 DTVTFNIL 274
+ T ++L
Sbjct: 642 NDTTHDLL 649
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 19/270 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-- 142
K ++P+ A YT +I + + R + ++++ + S GF V + + G
Sbjct: 389 KGFSPDLATYTSLILEYCKTSRAVEVVELVEEMA-------SKGFPPRVNTLSAVLGGLF 441
Query: 143 ---RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI-----QGIYTSAAKLGV 194
+AI+ M + C +NLV+ + A + + Q I K
Sbjct: 442 EGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNP 501
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
A ++ L++ LC+ G + A +L + ++ V +Y+ L+ GL +EA
Sbjct: 502 SSSA--VDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQ 559
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ E M S G + T N++IS L KV++ +L++RM GC P+ + ++ G
Sbjct: 560 VFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYC 619
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKL 344
R A++L+ M + P+ ++ L
Sbjct: 620 KSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
Length = 671
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 42/321 (13%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAG 142
RKD PN+A ++ +IN L Q + + ++++ +++K D YN +I + + A
Sbjct: 346 RKDCPPNDATFSTLINSLCQNRLVEYAVEVLE--QMQKYGYMPDVVSYNTIISCFSDQA- 402
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+A + L + S C P +FN VL L AK + + + K I+ N
Sbjct: 403 ---RADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFN 459
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-- 260
IL+ LC+NG ++ A V + PK C P++ TYS+L++G E+G E AF L M
Sbjct: 460 ILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCR 519
Query: 261 ------------------------------SEGIDADTVTFNILISGLRKQGKVEEGMKL 290
+E + VTFNILIS L ++G V + +
Sbjct: 520 ADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDV 579
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
E+M G P+ +Y ++ G ++ R +A + + M CE P +SY ++ GLC
Sbjct: 580 YEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE---PDTISYNSILKGLCR 636
Query: 351 QKLVEDVDWVLKKMVQQGFVP 371
+ +D + ++ +M+++ P
Sbjct: 637 AERWKDAEKLVTEMLRKNCTP 657
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 146/292 (50%), Gaps = 8/292 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L AK+++ E++M+ + + C ++ F I+ + G + +A+
Sbjct: 214 PDTYTYNTVLKGLCCAKQWEQAEELMREM-IRNSCHPNEVTFATQIRAFCQ-NGLLDRAV 271
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L MP Y C P V ++ ++N +G + + + C N LKGL
Sbjct: 272 ELLEQMPKYGCTPDVIIYSTLVNGFSE---HGRVDEALKLLNTMLCRPNTVCYNAALKGL 328
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G E ++ E +++C PN T+STL++ LC+ VE A +LE+M+ G D
Sbjct: 329 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 388
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V++N +IS Q + ++ +KLL+ M C P++ S+ VL L KR+ +A ELV +
Sbjct: 389 VSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAK 445
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + + +++ LI LC V+D V + M + +P + + ++
Sbjct: 446 MLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLI 497
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 134/255 (52%), Gaps = 10/255 (3%)
Query: 89 PNEALYTLIINKLAQAKR-FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ + ++ L +AKR +DA+E + + +K K CR ++ F N++ G++ A
Sbjct: 418 PDTISFNAVLKCLCKAKRWYDAVELVAKMLK--KDCRINEMTF-NILIDSLCQNGQVKDA 474
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
IE MP Y C P + T++ ++N L ++ S + D N LKG
Sbjct: 475 IEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRS---MPCRADIFSYNATLKG 531
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC + A ++ + ++C PN T++ L+ LC+KG V A + E+M GI D
Sbjct: 532 LCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPD 591
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+N LI+G +QG++++ +K L M C P++ SY +L GL +R+ +A++LV
Sbjct: 592 IFTYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVT 648
Query: 328 RMICERMSPSFVSYK 342
M+ + +P+ V++K
Sbjct: 649 EMLRKNCTPNEVTFK 663
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 140/290 (48%), Gaps = 12/290 (4%)
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
++I KL +R E +++ +K +D +N + G + A E + +
Sbjct: 121 ILIKKLCARRRLADAERVLEALKASGA---ADAVSHNTLVAGYCRDGSLGDA-ERVVEAA 176
Query: 156 SYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
+ +V T+ L+ S +L ++ I A + V D N +LKGLC
Sbjct: 177 RASGTANVVTYTALIDGYCRSGRLADALRLI----ASMPVAPDTYTYNTVLKGLCCAKQW 232
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
E A ++ E + +C PN T++T + C+ G ++ A LLE+M G D + ++ L
Sbjct: 233 EQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTL 292
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
++G + G+V+E +KLL M C PN+ Y L GL R+ E EL+ M+ +
Sbjct: 293 VNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDC 349
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
P+ ++ LI+ LC +LVE VL++M + G++P + + I+ C +
Sbjct: 350 PPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFS 399
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 8/292 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y + L A R++ + +++ + V K C +D F +I + A+
Sbjct: 316 PNTVCYNAALKGLCIAGRWEEVGELIAEM-VRKDCPPNDATFSTLINSLCQNR-LVEYAV 373
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M Y P V ++N +++ + + S + + D N +LK L
Sbjct: 374 EVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKS---MLCKPDTISFNAVLKCL 430
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ A ++ + K++C N T++ L+ LC+ G V++A + E M D
Sbjct: 431 CKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDI 490
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ LI+G +QG E L M C + SY L GL R+ +A EL+
Sbjct: 491 VTYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIAD 547
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ E P+ V++ LI LC + LV V ++M + G P + + ++
Sbjct: 548 MVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALI 599
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 126/254 (49%), Gaps = 4/254 (1%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN I + A + +A+E L M NC+ T+N +++ S+ + GI+
Sbjct: 45 DAVTYNSIIAALSKAQAMDRAMEVLTVMVMPNCF----TYNSIMHGYCSSGQSEKAIGIF 100
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
G+E D N L+ LC+NG A + D K+ +P++ TY TL+HG K
Sbjct: 101 RKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASK 160
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G + E LL M G+ D FNILI KQ KV+E + + +M+ +G PN+ +Y
Sbjct: 161 GALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNY 220
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+ V+ GL R +A +MI + ++P+ V Y LIH LC E + ++ +++
Sbjct: 221 RTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILD 280
Query: 367 QGFVPRMGMWREIV 380
QG P + + I+
Sbjct: 281 QGINPNIVFFNTIL 294
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%)
Query: 166 FNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP 225
FN+++ + E+ +++ + G+ +A ++ GLC+ G L+ A ++
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
+ PNV Y++L+H LC E+A L+ + +GI+ + V FN ++ L K+G+V
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
E KL + + G P+ +Y ++ G + A +L+ M+ + P V+Y LI
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+G C +ED + K+M G P + + I+
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPDIITYNIIL 399
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ A+ M P+V + +++ L + + + + + G+ +
Sbjct: 231 GRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFF 290
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L LC+ G + + + D P+V TYSTL+ G C G ++ A LL M S
Sbjct: 291 NTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVS 350
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D+VT++ LI+G K ++E+ + L + M+ G P+ +Y +L+GL +R
Sbjct: 351 VGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAA 410
Query: 322 AKELVGRM 329
AKEL R+
Sbjct: 411 AKELYARI 418
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 31/276 (11%)
Query: 44 DHHAYKL---NHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINK 100
DHH + + + EV+ +FS +R ++ PN Y +I+
Sbjct: 181 DHHVFNILICAYTKQEKVDEVVLVFSKMR--------------QQGLTPNAVNYRTVIDG 226
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI------SKAIETLFDM 154
L + R D D M + E++ G NV+ +Y ++ + KA E +F++
Sbjct: 227 LCKLGRLD---DAM--LNFEQM--IDKGLTPNVV-VYTSLIHALCTYDKWEKAEELIFEI 278
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
P++ FN +L+ L E + ++ +GV D + L+ G C G +
Sbjct: 279 LDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKM 338
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A +L +P+ TYSTL++G C+ +E+A L + MES G++ D +T+NI+
Sbjct: 339 DGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNII 398
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+ GL + + +L R+ G ++Y +L
Sbjct: 399 LHGLFRTRRTAAAKELYARITESGTQLELSTYNIIL 434
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 7/256 (2%)
Query: 121 KLCRFSDGF-----FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
K+C SDG YN + Y G+ ++A + M P + T+ +L+ S
Sbjct: 102 KMC--SDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYAS 159
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
E+ + + G+++D NIL+ + ++ V + +Q PN
Sbjct: 160 KGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVN 219
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y T++ GLC+ G +++A E+M +G+ + V + LI L K E+ +L+ +
Sbjct: 220 YRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEIL 279
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+G PN + +L L + R E+K+L + ++P ++Y LI G C ++
Sbjct: 280 DQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMD 339
Query: 356 DVDWVLKKMVQQGFVP 371
+L MV G P
Sbjct: 340 GAMKLLTGMVSVGLKP 355
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ LC E A ++ E Q PN+ ++T++ LC++G V E+ L + + G
Sbjct: 258 LIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIG 317
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
++ D +T++ LI G GK++ MKLL M G P+S +Y ++ G R +A
Sbjct: 318 VNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDAL 377
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
L M ++P ++Y ++HGL + + ++ + G + + I+ +
Sbjct: 378 ALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIIL--M 435
Query: 384 TFGKDN 389
F K N
Sbjct: 436 DFAKTN 441
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
C P+V +Y+T++ GL ++G+V++A+ M + D VT+N +I+ L K ++ M
Sbjct: 7 CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
++L M PN +Y +++G + +A + +M + + P V+Y L+ L
Sbjct: 67 EVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
C + + MV++G P + +
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPDITTY 150
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 114/223 (51%), Gaps = 3/223 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ F+ +L + K Y + +Y G+ + LNIL+ C L AF V
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K +P+ T++TL+ GLC +G + EA L ++M EG D +T+ LI+GL K
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
++ E + L M KG PN+ +Y +++GL + EA L MI ++ P ++
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187
Query: 341 YKKLIHGLCNQKLVEDVD---WVLKKMVQQGFVPRMGMWREIV 380
+ L+ LC + +++ +D + ++M QQG +P + ++
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLI 230
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 157/363 (43%), Gaps = 29/363 (7%)
Query: 14 SIIQSLSSASTITRKRTFALASPSASHQDS---DHHAYKLNHKDWLSPTEVLKIFSNLRD 70
SI+ ++ITR + ++ DS H+ Y LN ++ F +L
Sbjct: 9 SIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLN--------ILINSFCHLNR 60
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
SVL K Y P+ A +T +I L + + ++ E GF
Sbjct: 61 LGFAFSVLGDILKLG-YQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE-------GFQ 112
Query: 131 YNVIKIYGNMAG------RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
+V+ YG + ++++A+ DM + P+ T++ +++ L + E
Sbjct: 113 PDVLT-YGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIR 171
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGN---LEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
++ + + D N L+ LC+ G ++ A + +E +Q P+ TY+TL+H
Sbjct: 172 LFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIH 231
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GLC G + +A L M G D VT+ IL L K ++ E M LL+ ++G P
Sbjct: 232 GLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDP 291
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ Y V+ G+ A++L ++ + + P +Y +I+GLC Q L+ + +
Sbjct: 292 DIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLF 351
Query: 362 KKM 364
+M
Sbjct: 352 GEM 354
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 144/329 (43%), Gaps = 19/329 (5%)
Query: 56 LSPTEVLKIFSNLRDPISVI----SVLNQYSKRKDYNPNEALYTL--IINKLAQAKR--- 106
+ P + FS L I+ + +VL+ Y + + YTL +IN R
Sbjct: 4 MRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGF 63
Query: 107 -FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKT 165
F + DI+ ++ + S F +I+ + G+I +A++ M P V T
Sbjct: 64 AFSVLGDIL-KLGYQP----STATFTTLIRGL-CVEGKIGEALQLFDKMTGEGFQPDVLT 117
Query: 166 FNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP 225
+ ++N L + E +++ G+ + + L+ GLC G+ + A +
Sbjct: 118 YGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMI 177
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVE---EAFGLLERMESEGIDADTVTFNILISGLRKQG 282
+ P+ T++TL+ LC++G ++ +A GL E M +G+ DTVT+N LI GL G
Sbjct: 178 HRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVG 237
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
++ + + L M G P+ +Y+ + L R EA L+ + + P Y
Sbjct: 238 RLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYS 297
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ G+C +E + K+ +G P
Sbjct: 298 IVMDGMCRAGELEAARDLFSKLSSKGLHP 326
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GR+ AI +M Y P + T+ ++ + L E + ++ D
Sbjct: 236 VGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHI 295
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+I++ G+C G LEAA + + + P+VRTY+ +++GLC++G + EA L M+
Sbjct: 296 YSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMD 355
Query: 261 SEGIDA 266
I++
Sbjct: 356 ENDIES 361
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 2/278 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
+ +II+ L + F+ +++ IK +D F +I+ Y M I KA+E+
Sbjct: 94 HNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTV-LIQAYAKM-DMIEKAVESFEM 151
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M ++C P V T+N VL+++V ++ GIY KL + +IL+ G+C++G
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A + DE ++ PN TY+ ++ GLC+ + A+ L M+ G D+VT+N
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ G K G+V+E + LL+ + + Y ++ GL +RF +A+ +M
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P + Y ++ GL +D +L +M ++G VP
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVP 369
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 141/307 (45%), Gaps = 15/307 (4%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L +Y ++ Y ++ Y+ +I+ L +A+RF+ + +++ + D Y ++
Sbjct: 288 LLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIK--PDVILYTIMMKG 345
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+ AG+ A+ L +M P +N ++ L E + ++ +K
Sbjct: 346 LSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSS 405
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
AC IL+ G+C +G + A + +E K C P+V T++ L+ G C+ GN+E+A L
Sbjct: 406 ACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFY 465
Query: 258 RME-----------SEGID--ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ME S+G + DT + ++ L G + + +L ++ G PN
Sbjct: 466 KMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNII 525
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y +++G A +L + + +SP V+Y LI+GL + ED VL ++
Sbjct: 526 TYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQI 585
Query: 365 VQQGFVP 371
++ G P
Sbjct: 586 LKNGCTP 592
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 136/287 (47%), Gaps = 19/287 (6%)
Query: 81 YSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIY 137
Y K ++N P+ LYT+++ L++A +F ++ + L D YN +IK Y
Sbjct: 324 YRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLV--PDTHCYNALIKGY 381
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
++ G + +A ++ +C+ S T+ +++ + + L G+ Q I+ K G
Sbjct: 382 CDL-GLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPS 440
Query: 198 ACCLNILLKGLCENGNLEAA---FYVLD--EFPK--------QNCEPNVRTYSTLMHGLC 244
N L+ G C+ GN+E A FY ++ P N + + T++ LC
Sbjct: 441 VVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLC 500
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ G + +A+ +L ++ G + +T+NILI G K G + KL + ++ KG P+S
Sbjct: 501 DSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSV 560
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+Y ++ GLL R +A ++ +++ +P YK + C +
Sbjct: 561 TYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRR 607
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 136/331 (41%), Gaps = 50/331 (15%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN+ YT+II+ L QA++ D + +K + C D YN + GR+ +A+
Sbjct: 229 PNKITYTIIISGLCQAQKADVAYRLFIAMK-DHGC-IPDSVTYNALLHGFCKLGRVDEAL 286
Query: 149 ETL---------FDMPSYNC----------------W----------PSVKTFNLVLNLL 173
L D Y+C W P V + +++ L
Sbjct: 287 GLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGL 346
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
A + + + + G+ D C N L+KG C+ G L+ A + E K +C +
Sbjct: 347 SKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSA 406
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY+ L+ G+C G V +A + ME G VTFN LI G K G +E+ L +
Sbjct: 407 CTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYK 466
Query: 294 M-------------KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
M +G ++AS Q ++ L D +A ++ ++ +P+ ++
Sbjct: 467 MEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIIT 526
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LIHG C + + K++ +G P
Sbjct: 527 YNILIHGFCKAGNINGAFKLFKELQLKGLSP 557
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 22/252 (8%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ +LN+ ++R P+ Y +I D + + +++ K FS Y ++
Sbjct: 356 LRLLNEMTER-GLVPDTHCYNALIKGYCDLGLLDEAKSL--HLEISKNDCFSSACTYTIL 412
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+G + A + +M + C+PSV TFN +++ A G I+ K+ +
Sbjct: 413 ICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKA---GNIEKAQLLFYKMEI 469
Query: 195 E----------------IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+D L +++ LC++G + A+ +L + PN+ TY+
Sbjct: 470 GRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNI 529
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+HG C+ GN+ AF L + ++ +G+ D+VT+ LI+GL + E+ +L+++ G
Sbjct: 530 LIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNG 589
Query: 299 CYPNSASYQEVL 310
C P + Y+ +
Sbjct: 590 CTPITEVYKSFM 601
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 120/293 (40%), Gaps = 4/293 (1%)
Query: 74 VISVLNQYSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
V+ L Y++ N PN A ++++I+ + ++ + + + ++ + Y
Sbjct: 177 VLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRI--LPNKITY 234
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+I A + A M + C P T+N +L+ E G+ K
Sbjct: 235 TIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEK 294
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
+D + L+ GL E A + + N +P+V Y+ +M GL + G ++
Sbjct: 295 DRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKD 354
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A LL M G+ DT +N LI G G ++E L + C+ ++ +Y ++
Sbjct: 355 ALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILIC 414
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
G+ +A+++ M PS V++ LI G C +E + KM
Sbjct: 415 GMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM 467
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 11/259 (4%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEID 197
+G I KA L + P++ T+N++++ A G I G + +L G+ D
Sbjct: 502 SGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKA---GNINGAFKLFKELQLKGLSPD 558
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL-L 256
+ L+ GL E AF VLD+ K C P Y + M C + + AF L L
Sbjct: 559 SVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWL 618
Query: 257 ERMES-EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+ + S G D++ + + ++G+VEE ++ L M K A Y L GL
Sbjct: 619 KYLRSIPGRDSEVLKS---VEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQ 675
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
R EA ++ + + + S KLI+ L ++ + + +G++ +
Sbjct: 676 AGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRI 735
Query: 376 WREIVGCVTFGKDNRNRVY 394
++ + +D RNR +
Sbjct: 736 CNRLLKSLLRSEDKRNRAF 754
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 63/137 (45%)
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
+++ ++ L + E + +L+ ++ G F +LI K +E+ ++ E M
Sbjct: 93 SHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMM 152
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
K C P+ +Y VL+ ++ K+ A + RM+ P+ ++ LI G+C
Sbjct: 153 KDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKT 212
Query: 355 EDVDWVLKKMVQQGFVP 371
++ + +M Q+ +P
Sbjct: 213 QNALQMFDEMTQRRILP 229
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 177/369 (47%), Gaps = 18/369 (4%)
Query: 21 SASTITRKRTFALASPSASH-----QDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVI 75
+A T+ ++ + + PS S +DS +H Y + + ++K +S+L +
Sbjct: 107 TAQTLAQELALSASDPSGSSIFQCLKDS-YHVYNSSSAVF---DLMVKSYSHLNMIDQAV 162
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAK---RFDAIEDIMQRIKVEKLCRFSDGFF-Y 131
+ +N +K + P Y +++ + +++ + A E + I+ R S + Y
Sbjct: 163 NTIN-LAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIR----SRVSPNVYTY 217
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N++ G + K + +M C P+V T+N +++ E G+ S +
Sbjct: 218 NILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 277
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G++ + N+++ GLC G+++ A+ +L+E + P+ TY+TL++G C++GN +
Sbjct: 278 KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ 337
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A + M G+ VT+ LI+ + K + M+ ++M+ +G PN +Y ++
Sbjct: 338 ALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLID 397
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G + EA ++ M SPS V+Y IHG C + +E+ V+++MV++G P
Sbjct: 398 GFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAP 457
Query: 372 RMGMWREIV 380
+ + I+
Sbjct: 458 DVVSYSTII 466
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 146/312 (46%), Gaps = 17/312 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +P+ YT +IN + +A+ + + ++++ L R ++ + +I + G
Sbjct: 347 RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL-RPNERTYTTLIDGFSRQ-GL 404
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+++A L +M PSV T+N ++ + E G+ + G+ D +
Sbjct: 405 LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 464
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G C G L+ AF + E ++ P+ TYS+L+ GLCE + EA L + M G
Sbjct: 465 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 524
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D T+ LI+ +G + + + L + M KG P++ +Y ++ GL + R EAK
Sbjct: 525 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 584
Query: 324 ELVGRMICERMSPSFVSYKKLIH---------------GLCNQKLVEDVDWVLKKMVQQG 368
L+ ++I E PS V+Y LI G C + L+ + D V + MV++
Sbjct: 585 RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 644
Query: 369 FVPRMGMWREIV 380
P ++ I+
Sbjct: 645 HKPGEAVYNVII 656
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 2/251 (0%)
Query: 131 YN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN +I Y M GRI +A L M S P++ ++N+++N L E I
Sbjct: 252 YNTLIDAYCKM-GRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 310
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G D N LL G C+ GN A + E + P+V TY+ L++ +C+ N+
Sbjct: 311 GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 370
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
A ++M G+ + T+ LI G +QG + E ++L M G P+ +Y
Sbjct: 371 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 430
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
++G +R EA +V M+ + ++P VSY +I G C + ++ + ++MV++G
Sbjct: 431 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 490
Query: 370 VPRMGMWREIV 380
P + ++
Sbjct: 491 SPDAVTYSSLI 501
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 133/287 (46%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN Y +IIN L + +I++ + + D YN + G
Sbjct: 278 KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFT--PDEVTYNTLLNGYCKEGNF 335
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ +M PSV T+ ++N + A+ + G+ + L
Sbjct: 336 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 395
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G G L A+ +L+E + P+V TY+ +HG C +EEA G+++ M +G+
Sbjct: 396 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 455
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D V+++ +ISG ++G+++ ++ + M KG P++ +Y ++ GL + +R EA +
Sbjct: 456 APDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACD 515
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L M+ + P +Y LI+ C + + + +M+ +GF+P
Sbjct: 516 LSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLP 562
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I+ + R D +++ + + + + YNVI G + +A
Sbjct: 247 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQ--PNLISYNVIINGLCREGSMKEAW 304
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M P T+N +LN + + I+ + GV L+ +
Sbjct: 305 EILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSM 364
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ NL A D+ + PN RTY+TL+ G +G + EA+ +L M G
Sbjct: 365 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 424
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N I G ++EE + +++ M KG P+ SY ++ G K A ++
Sbjct: 425 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 484
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + +SP V+Y LI GLC + + + + ++M+ G P
Sbjct: 485 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPP 527
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 18/260 (6%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
+ Q K +P+ Y+ +I L + +R D+ Q + L D F Y +
Sbjct: 481 MKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLP--PDEFTYTTLINA 538
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG-----IYTSAAKL 192
+ G ++KA+ +M P T+++++N L E + IY +
Sbjct: 539 YCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPS 598
Query: 193 GVEIDAC---CLNI-------LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
V D C NI L+KG C G + A V + ++N +P Y+ ++HG
Sbjct: 599 DVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHG 658
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
C GN+ +AF L + M G TVT LI L K+G EE +++ + C N
Sbjct: 659 HCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL-RSCRLN 717
Query: 303 SASYQEVLYGLLDKKRFPEA 322
A +VL + K+ EA
Sbjct: 718 EAELAKVLVEINHKEGNMEA 737
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 71/377 (18%), Positives = 136/377 (36%), Gaps = 64/377 (16%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSK------RKDYNPNEALYTLIINKLAQAKRFDA 109
L P E + ++ L D S +LN+ + ++P+ Y I+ +R +
Sbjct: 385 LRPNE--RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEE 442
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLV 169
++Q + + L D Y+ I G + +A + +M P T++ +
Sbjct: 443 ALGVVQEMVEKGLA--PDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL 500
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
+ L + E + +G+ D L+ C G+L A ++ DE +
Sbjct: 501 IQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGF 560
Query: 230 EPNVRTYSTLMHGL---------------------------------------------- 243
P+ TYS L++GL
Sbjct: 561 LPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVAL 620
Query: 244 ----CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
C KG + EA + E M +N++I G + G + + L + M G
Sbjct: 621 IKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGF 680
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMI--CERMSPSFVSYKKLIHGLCNQKLVEDV 357
P++ + ++ L + E E++G + C R++ + ++ K L+ + +E V
Sbjct: 681 VPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSC-RLNEAELA-KVLVEINHKEGNMEAV 738
Query: 358 DWVLKKMVQQGFVPRMG 374
VL M + G +P G
Sbjct: 739 LNVLTDMAKDGLLPNSG 755
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 155/333 (46%), Gaps = 33/333 (9%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
+ ++I KLA + D+++ ++Q++K++ S+ F +VI +Y G +A+E +
Sbjct: 78 FEVMIRKLAMDGQVDSVQYLLQQMKLQGF-HCSEDLFISVISVY-RQVGLAERAVEMFYR 135
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+ + C PSVK +N VL+ L+ I +Y + G E + N+LLK LC+N
Sbjct: 136 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 195
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME------------- 260
++ A +L E + C PN +Y+T++ +CE G V+E L ER E
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGL 255
Query: 261 -----------------SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
+GI + ++++ LI+ L G++E LL +M +GC+PN
Sbjct: 256 CKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNI 315
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMI-CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+ ++ G + +A ++ +MI + P+ V+Y L+ G C+ ++ V
Sbjct: 316 HTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFL 375
Query: 363 KMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYV 395
M + G P + + ++ T VY+
Sbjct: 376 HMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYI 408
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 148/352 (42%), Gaps = 49/352 (13%)
Query: 62 LKIFSNLRDP------ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+KI++++ D I +I ++ + KR + PN Y +++ L + + D + ++
Sbjct: 145 VKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLV 204
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
+ + C + + + + + + + F+ P V +N ++N L
Sbjct: 205 EMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFE-------PVVSVYNALINGLCK 257
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ Y + + + G+ + + L+ L +G +E AF +L + K+ C PN+ T
Sbjct: 258 ERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHT 317
Query: 236 ------------------------------------YSTLMHGLCEKGNVEEAFGLLERM 259
Y+TL+ G C GN+++A + M
Sbjct: 318 LSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHM 377
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E G + T+ LI+G K+G +E + + +M GC PN Y ++ L +F
Sbjct: 378 EEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKF 437
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA+ L+ M E +PS ++ I GLC+ ++ + V ++M QQ P
Sbjct: 438 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCP 489
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 135/328 (41%), Gaps = 51/328 (15%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------ 140
+ P ++Y +IN L + + + ++M + VEK G NVI Y +
Sbjct: 241 FEPVVSVYNALINGLCKERDYKGGVELMSEM-VEK------GISPNVIS-YSTLINELSN 292
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+G+I A L M C P++ T + LV V + + G++ +
Sbjct: 293 SGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVV 352
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE--------- 250
N L++G C +GN++ A V + C PN+RTY +L++G ++G++E
Sbjct: 353 AYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKM 412
Query: 251 --------------------------EAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
EA L+E M E TFN I GL G++
Sbjct: 413 LTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 472
Query: 285 EEGMKLLERMKGK-GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKK 343
+ K+ +M+ + C PN +Y E+L GL R EA L + + S +Y
Sbjct: 473 DWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNT 532
Query: 344 LIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+HG CN L ++ KM+ G P
Sbjct: 533 LLHGSCNAGLPGIALQLVGKMMVNGKSP 560
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 112/247 (45%), Gaps = 9/247 (3%)
Query: 134 IKIYGNMA------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
I+ YG++ G + A+ M + C P+V + ++ L + E + +
Sbjct: 386 IRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIE 445
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEK 246
+K N +KGLC+ G L+ A V + +Q C PN+ TY+ L+ GL +
Sbjct: 446 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKA 505
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+EEA+GL + G++ T T+N L+ G G ++L+ +M G P+ +
Sbjct: 506 NRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITM 565
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICER--MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ + + A +++ + C R P +SY +I GLC ED + ++M
Sbjct: 566 NMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERM 625
Query: 365 VQQGFVP 371
+ + +P
Sbjct: 626 ISERIIP 632
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 29/264 (10%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS-- 145
+PN Y +IN + + I ++ + G NV+ +Y +M +
Sbjct: 383 SPNIRTYGSLINGFTKRGSLEGAVYIWNKM-------LTSGCCPNVV-VYTSMVEALCRH 434
Query: 146 ---KAIETLFD-MPSYNCWPSVKTFNLVLNLLVSA-------KLYGEIQGIYTSAAKLGV 194
K E+L + M NC PSV TFN + L A K++ +++ Y +
Sbjct: 435 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVT 494
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
N LL GL + +E A+ + E + E + TY+TL+HG C G A
Sbjct: 495 ------YNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQ 548
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG--KGCYPNSASYQEVLYG 312
L+ +M G D +T N++I KQGK E +++L+ + + P+ SY V++G
Sbjct: 549 LVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWG 608
Query: 313 LLDKKRFPEAKELVGRMICERMSP 336
L + L RMI ER+ P
Sbjct: 609 LCRSNCREDGVILFERMISERIIP 632
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%)
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T+ ++ L G V+ LL++M+ +G F +IS R+ G E +++ R+
Sbjct: 77 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 136
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
K GC P+ Y VL LL + R + M + P+ +Y L+ LC V
Sbjct: 137 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 196
Query: 355 EDVDWVLKKMVQQGFVP 371
+ +L +M +G P
Sbjct: 197 DGAKKLLVEMSNKGCCP 213
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 143/305 (46%), Gaps = 15/305 (4%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIE--DIMQRIKVEKLCRFS 126
D I ++S + + + P+ +Y II+ + DA+E D M+R V +
Sbjct: 157 DAIDLVSKMEEMG----FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR-----A 207
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN + +GR S A + DM + P+V TF V+++ V + E +Y
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ V+ D N L+ GLC +G ++ A +LD + C P+V TY+TL++G C+
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
V+E L M G+ DT+T+N +I G + G+ + ++ RM + PN +Y
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTY 384
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+LYGL R +A L M + +Y +IHG+C VED + + +
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 367 QGFVP 371
+G P
Sbjct: 445 KGLKP 449
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 5/245 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+D PN +T +I+ + +F + + ++ + C D F YN + M GR+
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYE--EMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A + L M + C P V T+N ++N +K E ++ A+ G+ D N +
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++G + G +AA + F + + PN+RTYS L++GLC VE+A L E M+ I
Sbjct: 356 IQGYFQAGRPDAAQEI---FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ D T+NI+I G+ K G VE+ L + KG P+ SY ++ G K+++ ++
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 472
Query: 325 LVGRM 329
L +M
Sbjct: 473 LYRKM 477
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 144/310 (46%), Gaps = 4/310 (1%)
Query: 63 KIFSNLRDPISVISVLNQYSKRKDYNPNEAL--YTLIINKLAQAKRFDAIEDIMQRIKVE 120
+ FS R +++ ++ + K P ++ ++ +++K+A++K +D + + ++V
Sbjct: 39 RTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVC 98
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+ D + YN++ R A+ + M + P V T + ++N
Sbjct: 99 GIGH--DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ + + ++G D N ++ G C+ G + A + D + + TY++L+
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
GLC G +A L+ M I + +TF +I K+GK E MKL E M +
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P+ +Y ++ GL R EAK+++ M+ + P V+Y LI+G C K V++ +
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 361 LKKMVQQGFV 370
++M Q+G V
Sbjct: 337 FREMAQRGLV 346
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
++N+V+N L + + K G E D ++ L+ G C+ + A ++ +
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ P+V Y+T++ G C+ G V +A L +RME +G+ AD VT+N L++GL G+
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ +L+ M + PN ++ V+ + + +F EA +L M + P +Y L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
I+GLC V++ +L MV +G +P + + ++
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 12/259 (4%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-----RISKAI 148
Y ++IN L + RF ++ V K+ +F G+ +V+ + + G R+ AI
Sbjct: 107 YNIVINCLCRCSRF-----VIALSVVGKMMKF--GYEPDVVTVSSLINGFCQGNRVFDAI 159
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + M P V +N +++ L + ++ + GV DA N L+ GL
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +G A ++ + ++ PNV T++ ++ ++G EA L E M +D D
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N LI+GL G+V+E ++L+ M KGC P+ +Y ++ G KR E +L
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 329 MICERMSPSFVSYKKLIHG 347
M + ++Y +I G
Sbjct: 340 MAQRGLVGDTITYNTIIQG 358
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
RT+ST + N+EE L +M V F+ ++S + K + + L
Sbjct: 39 RTFSTKRSSM----NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHH 94
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M+ G + SY V+ L RF A +VG+M+ P V+ LI+G C
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
V D ++ KM + GF P + ++ I+
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTII 181
>gi|15220068|ref|NP_178132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806404|sp|Q8GW57.2|PP134_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80150, mitochondrial; Flags: Precursor
gi|332198242|gb|AEE36363.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 397
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 36 PSASHQDSDHHAYKLNHKDWLSPTE--VLKIFSNLRDPISVISVLNQYSKRKDYNPNEAL 93
PS++ + + + N L P E L + RDP + ++ + + N
Sbjct: 14 PSSAATGIAYVSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFA 73
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
+ +++LA A R D IED+++ K R +GF +I +YG AG +A++T F+
Sbjct: 74 FEDTVSRLAGAGRLDFIEDLLEHQKTLPQGR-REGFIVRIIMLYGK-AGMTKQALDTFFN 131
Query: 154 MPSYNCWPSVKTFNLVLNLL-VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M Y C SVK+FN L +L + L+ + ++ + +K G++IDA NI +K CE G
Sbjct: 132 MDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELG 191
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
L+ A+ + E K P+V TY+TL+ L + GL M +G + TFN
Sbjct: 192 ILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFN 251
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV-GRMIC 331
+ I L + + + LL M P+S +Y V+ G RFP+ E V M
Sbjct: 252 VRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFF-LARFPDMAERVYTAMHG 310
Query: 332 ERMSPSFVSYKKLIHGLC 349
+ P+ Y+ +IH LC
Sbjct: 311 KGYKPNLKIYQTMIHYLC 328
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 115/240 (47%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + +A+ M C P ++++++ L A GE + T A G +
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C G+LE A + + C PNVRTY+ L+ G C+ G VE A L RM
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ + VT+ LI G +G +E +LL M+ G PN + ++ L R
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIE 336
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA++ +G ++ + + + V Y +I LC + +++K++ +GFVP M+ ++
Sbjct: 337 EAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLI 396
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 79/168 (47%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL+GLC G + A V C P+ YS ++HGLC G EA LL +G
Sbjct: 150 LLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKG 209
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ +N LI G G +E + + + M+ KGC PN +Y +++ G + A
Sbjct: 210 FVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAM 269
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L RMI ++P+ V+Y LI G C++ +E +L M G P
Sbjct: 270 VLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAP 317
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 114/276 (41%), Gaps = 2/276 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
YT +IN A A + + + L D Y + G + A
Sbjct: 77 YTTLINAYCHAGDLPAAKRHLSSLLRAGLA--PDSHAYTSFVLGYCRTGLFAHACRLFLL 134
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
MP C + T+ +L L A + E ++ G D+ +I++ GLC G
Sbjct: 135 MPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGR 194
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
A +L + + PNV Y+ L+ G C G++E A + + M+S+G + T+
Sbjct: 195 AGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQ 254
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K GKVE M L RM G PN +Y ++ G + A L+ M
Sbjct: 255 LICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACG 314
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
++P+ + LI LC +E+ L +VQ+G
Sbjct: 315 LAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGI 350
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 138/334 (41%), Gaps = 51/334 (15%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
P+ +Y+++++ L A R ++ GF NV +Y + G
Sbjct: 177 PDSHVYSIMVHGLCGAGRAGEAVALLTD-------AMGKGFVPNV-AVYNALIDGYCSTG 228
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ AI+ M S C P+V+T+ L+ S K+ + +Y+ + G+ +
Sbjct: 229 DLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMV-LYSRMIEAGLAPNVVTY 287
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L++G C G+LE AF +L PN T L+ LC+ G +EEA L +
Sbjct: 288 TTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQ 347
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI + V + +I L K GK + L++++ +G P++ Y ++ GL + + E
Sbjct: 348 KGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLE 407
Query: 322 AKELVG------------------------------RMICERMS-----PSFVSYKKLIH 346
A L+ +MI +RM+ P V+Y I
Sbjct: 408 AISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIR 467
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C +ED + ++ +M+ G P + + ++
Sbjct: 468 SYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLI 501
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 126/298 (42%), Gaps = 12/298 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGNMA-GR 143
PN YT +I ++ + + + R+ G NV+ I G + G
Sbjct: 247 PNVRTYTQLICGFCKSGKVERAMVLYSRM-------IEAGLAPNVVTYTTLIQGQCSEGH 299
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A L M + P+ T ++++ L E Q S + G++++
Sbjct: 300 LEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTS 359
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ LC++G + A ++ + + P+ YS+L+ GLC + + EA LL M G
Sbjct: 360 MIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESG 419
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ A+ V F ILI ++ + + + +RM G P+ +Y + R +A+
Sbjct: 420 VQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAE 479
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
++ +MI + P+ +Y LI G N LV LK M+ G P + ++G
Sbjct: 480 SMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLG 537
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 4/227 (1%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
MP N + T+ ++N A + +S + G+ D+ + G C G
Sbjct: 69 MPVRN----LHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGL 124
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
A + P++ C TY+ L+ GLC G V EA + M +G D+ ++I
Sbjct: 125 FAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSI 184
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
++ GL G+ E + LL GKG PN A Y ++ G A ++ M +
Sbjct: 185 MVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKG 244
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P+ +Y +LI G C VE + +M++ G P + + ++
Sbjct: 245 CLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLI 291
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 135/313 (43%), Gaps = 18/313 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K N+ +YT +I+ L ++ +FD ++MQ+I E D Y+ + +
Sbjct: 347 QKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGF--VPDAHMYSSLIDGLCRENK 404
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +AI L DM + F ++++ + + I A GV+ D +
Sbjct: 405 LLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTV 464
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C++G +E A ++ + PN+ TY+TL+ G G V +AF L+ M G
Sbjct: 465 FIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNG 524
Query: 264 IDADTVTFNILISGLRKQGKVEE------------GMKLLERMKGK----GCYPNSASYQ 307
+ ++ +L+ L K+ + MK+LE + + C S Y
Sbjct: 525 CKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYD 584
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ L R EAK + M ++PS Y +I KL+++ L MV++
Sbjct: 585 CFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKR 644
Query: 368 GFVPRMGMWREIV 380
++PR+ +R I+
Sbjct: 645 NYLPRLESYRFII 657
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 129/296 (43%), Gaps = 21/296 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT+ I Q R + E +M ++ ++ R + + +IK Y N+ G +S+A
Sbjct: 457 PDVVTYTVFIRSYCQDGRMEDAESMMIQM-IDHGVRPNLTTYNTLIKGYANL-GLVSQAF 514
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+L +M C P+ +++ ++L LL+ Y ++ S K+ + +K L
Sbjct: 515 SSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKI----------VDMKVL 564
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
E +L+E K C Y + L + +EEA L M+S +
Sbjct: 565 EE---------LLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSE 615
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ +I + ++E ++ L+ M + P SY+ ++ L ++ F AK + G
Sbjct: 616 DVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGD 675
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
++ + + +++K LI GL + D +L M +Q P ++ + G +T
Sbjct: 676 ILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEIT 731
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 138/274 (50%), Gaps = 3/274 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K P+ + Y L+++ L R +D+++ ++ + + D YN++ + G
Sbjct: 382 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI--IPDAITYNILINGYSRCGN 439
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
KA + +M S P+ T+ ++ +L E ++ GV D N
Sbjct: 440 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 499
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G C NGN+E AF +L E +++ P+ T++TLM G C +G VEEA LL+ M+ G
Sbjct: 500 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 559
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +++N LISG ++G +++ ++ + M G P +Y ++ L + A+
Sbjct: 560 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 619
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCN-QKLVED 356
EL+ M+ + +SP +Y LI G+ N LVED
Sbjct: 620 ELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVED 653
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 143/323 (44%), Gaps = 39/323 (12%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGR 143
K P+ Y +I+ + + R + + K+ ++ + YN +I Y N G
Sbjct: 313 KGIEPDSYTYGSLISGMCKEGRLEEASGLFD--KMVEIGLVPNAVTYNTLIDGYCN-KGD 369
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A +M PSV T+NL+++ L GE + K G+ DA NI
Sbjct: 370 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 429
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH---------------------- 241
L+ G GN + AF + +E + EP TY++L++
Sbjct: 430 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 489
Query: 242 -------------GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
G C GNVE AF LL+ M+ + + D VTFN L+ G ++GKVEE
Sbjct: 490 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 549
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
LL+ MK +G P+ SY ++ G + +A + M+ +P+ ++Y LI L
Sbjct: 550 MLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCL 609
Query: 349 CNQKLVEDVDWVLKKMVQQGFVP 371
C + + + +LK+MV +G P
Sbjct: 610 CKNQEGDLAEELLKEMVNKGISP 632
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 120/242 (49%), Gaps = 2/242 (0%)
Query: 131 YNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN I I+G + G I A L M P T+ +++ + E G++
Sbjct: 287 YNTI-IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM 345
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
++G+ +A N L+ G C G+LE AF DE K+ P+V TY+ L+H L +G +
Sbjct: 346 VEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRM 405
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EA +++ M +GI D +T+NILI+G + G ++ L M KG P +Y +
Sbjct: 406 GEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSL 465
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+Y L + R EA +L +++ + +SP + + ++ G C VE +LK+M ++
Sbjct: 466 IYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSV 525
Query: 370 VP 371
P
Sbjct: 526 PP 527
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 117/229 (51%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R +A + + M P ++T N +L+L + +Y +L + N
Sbjct: 194 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 253
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ LC+ G L+ A + +PNV +Y+T++HG +GN+E A +L+ M +
Sbjct: 254 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 313
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI+ D+ T+ LISG+ K+G++EE L ++M G PN+ +Y ++ G +K A
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 373
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + + PS +Y L+H L + + + D ++K+M ++G +P
Sbjct: 374 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP 422
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 35/254 (13%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
+V TFN+++N+L + + LG + + N ++ G GN+E A +L
Sbjct: 248 TVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRIL 307
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
D + EP+ TY +L+ G+C++G +EEA GL ++M G+ + VT+N LI G +
Sbjct: 308 DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNK 367
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV--------------- 326
G +E + M KG P+ ++Y +++ L + R EA +++
Sbjct: 368 GDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITY 427
Query: 327 --------------------GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
M+ + + P+ V+Y LI+ L + +++ D + +K++
Sbjct: 428 NILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD 487
Query: 367 QGFVPRMGMWREIV 380
QG P + M+ +V
Sbjct: 488 QGVSPDVIMFNAMV 501
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+I+ C N +L + +E A+ + E + V T++ +++ LC++G +++A
Sbjct: 213 KIETC--NDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKARE 270
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ ME G + V++N +I G +G +E ++L+ M+ KG P+S +Y ++ G+
Sbjct: 271 FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMC 330
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ R EA L +M+ + P+ V+Y LI G CN+ +E +MV++G +P +
Sbjct: 331 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS 390
Query: 375 MWREIV 380
+ +V
Sbjct: 391 TYNLLV 396
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
++L++ CE + AF ++ P + T + ++ + +E A+ L M
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
I + TFNI+++ L K+GK+++ + + M+G G PN SY +++G +
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 301
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A+ ++ M + + P +Y LI G+C + +E+ + KMV+ G VP + ++
Sbjct: 302 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 361
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 143/305 (46%), Gaps = 15/305 (4%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIE--DIMQRIKVEKLCRFS 126
D I ++S + + + P+ +Y II+ + DA+E D M+R V +
Sbjct: 98 DAIDLVSKMEEMG----FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR-----A 148
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN + +GR S A + DM + P+V TF V+++ V + E +Y
Sbjct: 149 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 208
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ V+ D N L+ GLC +G ++ A +LD + C P+V TY+TL++G C+
Sbjct: 209 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 268
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
V+E L M G+ DT+T+N +I G + G+ + ++ RM + PN +Y
Sbjct: 269 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTY 325
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+LYGL R +A L M + +Y +IHG+C VED + + +
Sbjct: 326 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 385
Query: 367 QGFVP 371
+G P
Sbjct: 386 KGLKP 390
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 5/245 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+D PN +T +I+ + +F + + ++ + C D F YN + M GR+
Sbjct: 179 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYE--EMTRRCVDPDVFTYNSLINGLCMHGRV 236
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A + L M + C P V T+N ++N +K E ++ A+ G+ D N +
Sbjct: 237 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 296
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++G + G +AA + F + + PN+RTYS L++GLC VE+A L E M+ I
Sbjct: 297 IQGYFQAGRPDAAQEI---FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 353
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ D T+NI+I G+ K G VE+ L + KG P+ SY ++ G K+++ ++
Sbjct: 354 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 413
Query: 325 LVGRM 329
L +M
Sbjct: 414 LYRKM 418
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 132/282 (46%), Gaps = 2/282 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ ++ +++K+A++K +D + + ++V + D + YN++ R A+
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGH--DLYSYNIVINCLCRCSRFVIAL 65
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M + P V T + ++N + + + ++G D N ++ G
Sbjct: 66 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 125
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G + A + D + + TY++L+ GLC G +A L+ M I +
Sbjct: 126 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 185
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+TF +I K+GK E MKL E M + P+ +Y ++ GL R EAK+++
Sbjct: 186 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 245
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
M+ + P V+Y LI+G C K V++ + ++M Q+G V
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 287
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
++N+V+N L + + K G E D ++ L+ G C+ + A ++ +
Sbjct: 47 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 106
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ P+V Y+T++ G C+ G V +A L +RME +G+ AD VT+N L++GL G+
Sbjct: 107 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 166
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ +L+ M + PN ++ V+ + + +F EA +L M + P +Y L
Sbjct: 167 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 226
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
I+GLC V++ +L MV +G +P + + ++
Sbjct: 227 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 262
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 12/259 (4%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-----RISKAI 148
Y ++IN L + RF ++ V K+ +F G+ +V+ + + G R+ AI
Sbjct: 48 YNIVINCLCRCSRF-----VIALSVVGKMMKF--GYEPDVVTVSSLINGFCQGNRVFDAI 100
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + M P V +N +++ L + ++ + GV DA N L+ GL
Sbjct: 101 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 160
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +G A ++ + ++ PNV T++ ++ ++G EA L E M +D D
Sbjct: 161 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 220
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N LI+GL G+V+E ++L+ M KGC P+ +Y ++ G KR E +L
Sbjct: 221 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 280
Query: 329 MICERMSPSFVSYKKLIHG 347
M + ++Y +I G
Sbjct: 281 MAQRGLVGDTITYNTIIQG 299
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V F+ ++S + K + + L M+ G + SY V+ L RF A +VG+
Sbjct: 11 VDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGK 70
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ P V+ LI+G C V D ++ KM + GF P + ++ I+
Sbjct: 71 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII 122
>gi|302755288|ref|XP_002961068.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
gi|300172007|gb|EFJ38607.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
Length = 461
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 153/299 (51%), Gaps = 8/299 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+LII+ L ++ D + +++R+ + + C D Y+ + + GR+ +A+E +
Sbjct: 125 YSLIIHSLCKSGMVDKAKVLVERM-ISRNC-VPDARIYDPVIEELSKTGRVDEAVEIAKE 182
Query: 154 MPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+ +C SV T+N LVL L + +L I+ ++T A+ G D NIL +GL +G
Sbjct: 183 ADAKHC-TSVVTYNSLVLGFLKARRLKRGIK-VFTRMARTGPSPDIYTYNILFEGLSRHG 240
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
A+ +L + P+V T+++L++GL E A L++ M S G D + +T+
Sbjct: 241 LWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYT 300
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
IL+ L + + +E ++L +R+ + PN +Y V+ L R +A L G M+
Sbjct: 301 ILLKWLARNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLAS 360
Query: 333 RMS-PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
+ P+ ++Y+ LIHGLC + +E +L M ++G P + + IV F K R
Sbjct: 361 DCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACYGTIVA--AFCKQGR 417
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 128/293 (43%), Gaps = 7/293 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +Y +I +L++ R D +I + K C + YN + + A R+ + I
Sbjct: 155 PDARIYDPVIEELSKTGRVDEAVEIAKEADA-KHC--TSVVTYNSLVLGFLKARRLKRGI 211
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M P + T+N++ L L+ + + GV D N L+ GL
Sbjct: 212 KVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGL 271
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
E+ A ++ E + C+PN TY+ L+ L +E L +R+ + +
Sbjct: 272 VEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARNARTDECVELFQRLLDRKLAPNV 331
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYP-NSASYQEVLYGLLDKKRFPEAKELVG 327
T+N ++S L K G++++ +L M C P N+ +Y+ +++GL K A L+
Sbjct: 332 YTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLD 391
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M +P Y ++ C Q +++ +L++M F M+R +V
Sbjct: 392 AMAKRGCAPDVACYGTIVAAFCKQGRIDEAFELLERM---PFAGDKVMFRTLV 441
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 8/230 (3%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D + YN++ + G A + L M P V TFN ++N LV Y +
Sbjct: 225 DIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLI 284
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
G + +A ILLK L N + + + PNV TY+T+M LC+
Sbjct: 285 QEMVSRGCDPNAITYTILLKWLARNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKA 344
Query: 247 GNVEEA---FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
G +++A FG++ + S+ + +T+ LI GL + ++E + LL+ M +GC P+
Sbjct: 345 GRLDQAHRLFGVM--LASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDV 402
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
A Y ++ + R EA EL+ RM + V ++ L+ LC +L
Sbjct: 403 ACYGTIVAAFCKQGRIDEAFELLERM---PFAGDKVMFRTLVRALCKLQL 449
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 127/291 (43%), Gaps = 37/291 (12%)
Query: 141 AGRISKAIETLFDMP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
AG + A+E L + S++ SV T+++++ L +AK + + +G+E D
Sbjct: 64 AGNVDGALEFLREAKNSFSLRASVSTYSILVAALTAAKRNNDALELLEQMESVGLEADKD 123
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA------- 252
++++ LC++G ++ A +++ +NC P+ R Y ++ L + G V+EA
Sbjct: 124 TYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAVEIAKEA 183
Query: 253 ---------------FGLLE------------RMESEGIDADTVTFNILISGLRKQGKVE 285
G L+ RM G D T+NIL GL + G
Sbjct: 184 DAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWR 243
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
KLL RM G P+ ++ ++ GL++ R+ A L+ M+ P+ ++Y L+
Sbjct: 244 FAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILL 303
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRNRVY 394
L ++ + ++++ + P + + ++ C D +R++
Sbjct: 304 KWLARNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLF 354
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 15/191 (7%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
LN L+GLC+ GN++ A L E + +V TYS L+ L +A LLE+M
Sbjct: 54 LNGCLRGLCKAGNVDGALEFLREAKNSFSLRASVSTYSILVAALTAAKRNNDALELLEQM 113
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
ES G++AD T++++I L K G V++ L+ERM + C P++ Y V+ L R
Sbjct: 114 ESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRV 173
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-------- 371
EA E + + + S V+Y L+ G + ++ V +M + G P
Sbjct: 174 DEAVE-IAKEADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNIL 232
Query: 372 -----RMGMWR 377
R G+WR
Sbjct: 233 FEGLSRHGLWR 243
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 39/193 (20%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN YT+++ LA+ R D ++ QR+ KL + + YN + AGR+ +A
Sbjct: 293 DPNAITYTILLKWLARNARTDECVELFQRLLDRKLA--PNVYTYNTVMSALCKAGRLDQA 350
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
M + +C P +A L+ G
Sbjct: 351 HRLFGVMLASDCTPP----------------------------------NAITYRALIHG 376
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC LE A +LD K+ C P+V Y T++ C++G ++EAF LLERM G D
Sbjct: 377 LCLKMELERAVLLLDAMAKRGCAPDVACYGTIVAAFCKQGRIDEAFELLERMPFAG---D 433
Query: 268 TVTFNILISGLRK 280
V F L+ L K
Sbjct: 434 KVMFRTLVRALCK 446
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 71/172 (41%), Gaps = 36/172 (20%)
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL-ERMESEGIDADT 268
E GNL A +L + + +++ + + GLC+ GNV+ A L E S + A
Sbjct: 28 EQGNLRATIELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFLREAKNSFSLRASV 87
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T++IL++ L + + ++LLE+M+ G + +Y +
Sbjct: 88 STYSILVAALTAAKRNNDALELLEQMESVGLEADKDTYSLI------------------- 128
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
IH LC +V+ ++++M+ + VP ++ ++
Sbjct: 129 ----------------IHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVI 164
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 138/274 (50%), Gaps = 3/274 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K P+ + Y L+++ L R +D+++ ++ + + D YN++ + G
Sbjct: 360 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI--IPDAITYNILINGYSRCGN 417
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
KA + +M S P+ T+ ++ +L E ++ GV D N
Sbjct: 418 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 477
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G C NGN+E AF +L E +++ P+ T++TLM G C +G VEEA LL+ M+ G
Sbjct: 478 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 537
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +++N LISG ++G +++ ++ + M G P +Y ++ L + A+
Sbjct: 538 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 597
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCN-QKLVED 356
EL+ M+ + +SP +Y LI G+ N LVED
Sbjct: 598 ELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVED 631
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 143/323 (44%), Gaps = 39/323 (12%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGR 143
K P+ Y +I+ + + R + + K+ ++ + YN +I Y N G
Sbjct: 291 KGIEPDSYTYGSLISGMCKEGRLEEASGLFD--KMVEIGLVPNAVTYNTLIDGYCN-KGD 347
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A +M PSV T+NL+++ L GE + K G+ DA NI
Sbjct: 348 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 407
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH---------------------- 241
L+ G GN + AF + +E + EP TY++L++
Sbjct: 408 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 467
Query: 242 -------------GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
G C GNVE AF LL+ M+ + + D VTFN L+ G ++GKVEE
Sbjct: 468 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 527
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
LL+ MK +G P+ SY ++ G + +A + M+ +P+ ++Y LI L
Sbjct: 528 MLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCL 587
Query: 349 CNQKLVEDVDWVLKKMVQQGFVP 371
C + + + +LK+MV +G P
Sbjct: 588 CKNQEGDLAEELLKEMVNKGISP 610
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 120/242 (49%), Gaps = 2/242 (0%)
Query: 131 YNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN I I+G + G I A L M P T+ +++ + E G++
Sbjct: 265 YNTI-IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM 323
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
++G+ +A N L+ G C G+LE AF DE K+ P+V TY+ L+H L +G +
Sbjct: 324 VEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRM 383
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EA +++ M +GI D +T+NILI+G + G ++ L M KG P +Y +
Sbjct: 384 GEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSL 443
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+Y L + R EA +L +++ + +SP + + ++ G C VE +LK+M ++
Sbjct: 444 IYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSV 503
Query: 370 VP 371
P
Sbjct: 504 PP 505
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 117/229 (51%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R +A + + M P ++T N +L+L + +Y +L + N
Sbjct: 172 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 231
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ LC+ G L+ A + +PNV +Y+T++HG +GN+E A +L+ M +
Sbjct: 232 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 291
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI+ D+ T+ LISG+ K+G++EE L ++M G PN+ +Y ++ G +K A
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 351
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + + PS +Y L+H L + + + D ++K+M ++G +P
Sbjct: 352 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP 400
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 35/254 (13%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
+V TFN+++N+L + + LG + + N ++ G GN+E A +L
Sbjct: 226 TVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRIL 285
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
D + EP+ TY +L+ G+C++G +EEA GL ++M G+ + VT+N LI G +
Sbjct: 286 DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNK 345
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV--------------- 326
G +E + M KG P+ ++Y +++ L + R EA +++
Sbjct: 346 GDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITY 405
Query: 327 --------------------GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
M+ + + P+ V+Y LI+ L + +++ D + +K++
Sbjct: 406 NILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD 465
Query: 367 QGFVPRMGMWREIV 380
QG P + M+ +V
Sbjct: 466 QGVSPDVIMFNAMV 479
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+I+ C N +L + +E A+ + E + V T++ +++ LC++G +++A
Sbjct: 191 KIETC--NDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKARE 248
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ ME G + V++N +I G +G +E ++L+ M+ KG P+S +Y ++ G+
Sbjct: 249 FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMC 308
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ R EA L +M+ + P+ V+Y LI G CN+ +E +MV++G +P +
Sbjct: 309 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS 368
Query: 375 MWREIV 380
+ +V
Sbjct: 369 TYNLLV 374
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
++L++ CE + AF ++ P + T + ++ + +E A+ L M
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
I + TFNI+++ L K+GK+++ + + M+G G PN SY +++G +
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 279
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A+ ++ M + + P +Y LI G+C + +E+ + KMV+ G VP + ++
Sbjct: 280 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 339
>gi|5902386|gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thaliana]
Length = 419
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 36 PSASHQDSDHHAYKLNHKDWLSPTE--VLKIFSNLRDPISVISVLNQYSKRKDYNPNEAL 93
PS++ + + + N L P E L + RDP + ++ + + N
Sbjct: 14 PSSAATGIAYVSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFA 73
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
+ +++LA A R D IED+++ K R +GF +I +YG AG +A++T F+
Sbjct: 74 FEDTVSRLAGAGRLDFIEDLLEHQKTLPQGR-REGFIVRIIMLYGK-AGMTKQALDTFFN 131
Query: 154 MPSYNCWPSVKTFNLVLNLL-VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M Y C SVK+FN L +L + L+ + ++ + +K G++IDA NI +K CE G
Sbjct: 132 MDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELG 191
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
L+ A+ + E K P+V TY+TL+ L + GL M +G + TFN
Sbjct: 192 ILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFN 251
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV-GRMIC 331
+ I L + + + LL M P+S +Y V+ G RFP+ E V M
Sbjct: 252 VRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFF-LARFPDMAERVYTAMHG 310
Query: 332 ERMSPSFVSYKKLIHGLC 349
+ P+ Y+ +IH LC
Sbjct: 311 KGYKPNLKIYQTMIHYLC 328
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS FN +L + K Y + + G+ D LNIL+ C L AF V
Sbjct: 67 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K +P+ T++TL+ GLC +G + +A L ++M EG + VT+ LI+GL K
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++LL M+ C P+ Y ++ L ++ EA L +M+ + +SP +
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 246
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LIH LCN + V +L +M+ +P + ++ +V
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVV 286
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 2/245 (0%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ P V T N+++N G + KLG + D L++GLC G
Sbjct: 95 MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A ++ D+ + +PNV TY TL++GLC+ GN A LL ME D V +
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 214
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I L K +V E L +M G+G P+ +Y +++ L + + L+ +MI +
Sbjct: 215 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 274
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRN 391
+ P V + ++ LC + + + V+ M+ +G P + + ++ C+ D
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 334
Query: 392 RVYVT 396
+V+ T
Sbjct: 335 KVFDT 339
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 137/298 (45%), Gaps = 17/298 (5%)
Query: 87 YNPNEALYTLIINKL-AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM----- 140
+ P+ A +T +I L + K DA+ + I +GF NV+ YG +
Sbjct: 135 HQPDTATFTTLIRGLCVEGKIGDALHLFDKMI--------GEGFQPNVVT-YGTLINGLC 185
Query: 141 -AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G + AI L M NC P V + +++ L + E +++ G+ D
Sbjct: 186 KVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIF 245
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
L+ LC + +L++ P+V +ST++ LC++G + EA +++ M
Sbjct: 246 TYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMM 305
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G++ + VT+N L+ G Q +++E +K+ + M G PN SY ++ G +R
Sbjct: 306 IIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM 365
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+A L M + + P+ V+Y L+H C+ ++D + +MV G +P + +R
Sbjct: 366 DKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYR 422
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 116/245 (47%), Gaps = 6/245 (2%)
Query: 127 DGFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
+G+ NVI + G R+ KA +M P+ T+N +++ +L
Sbjct: 343 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDA 402
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
I + A G D ILL LC+ +L+ A +L N +P+++ Y+ ++
Sbjct: 403 IALFHEMVAH-GQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVID 461
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
G+C G +E A + + S+G+ + T+ I+I+GL ++G ++E KL M G GC P
Sbjct: 462 GMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSP 521
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ +Y + GLL K A +L+ M+ S + L+ LC+ KL + V +L
Sbjct: 522 DGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 581
Query: 362 KKMVQ 366
+ VQ
Sbjct: 582 SEFVQ 586
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 2/239 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ A L + P TF L+ L V K+ G+ ++ G + +
Sbjct: 119 RLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKI-GDALHLFDKMIGEGFQPNVVTY 177
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC+ GN AA +L + NC+P+V Y++++ LC+ V EAF L +M
Sbjct: 178 GTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVG 237
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI D T+ LI L + + LL +M P+ + V+ L + + E
Sbjct: 238 QGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITE 297
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ++V MI + P+ V+Y L+ G C Q +++ V MV G+ P + + ++
Sbjct: 298 AHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 356
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 139/300 (46%), Gaps = 5/300 (1%)
Query: 74 VISVLNQYSKR--KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
V N +SK + +P+ YT +I+ L + + ++ ++ K+ D +
Sbjct: 225 VTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKI--MPDVVIF 282
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ + G+I++A + + M P+V T+N +++ E ++ +
Sbjct: 283 STVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 342
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G + N L+ G C+ ++ A Y+ +E ++ PN TY+TLMH C G +++
Sbjct: 343 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQD 401
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A L M + G D T+ IL+ L K+ ++E M LL+ ++G P+ Y V+
Sbjct: 402 AIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVID 461
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G+ A+++ + + + P+ +Y +I+GLC + L+++ + + +M G P
Sbjct: 462 GMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSP 521
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 113/244 (46%), Gaps = 3/244 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN Y +IN + +R D + + + ++L + YN + ++ GR+
Sbjct: 345 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKEL--IPNTVTYNTL-MHXCHVGRLQD 401
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
AI +M ++ P + T+ ++L+ L E + + ++ D I++
Sbjct: 402 AIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVID 461
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G+C G LEAA + + PNVRTY+ +++GLC +G ++EA L M+ G
Sbjct: 462 GMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSP 521
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T+N + GL + + ++LL+ M +G + ++ ++ L D K K+++
Sbjct: 522 DGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 581
Query: 327 GRMI 330
+
Sbjct: 582 SEFV 585
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 144/322 (44%), Gaps = 16/322 (4%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + T ++ NL + V ++LNQ K P+ +++ +++ L + + D+
Sbjct: 243 DIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK-IMPDVVIFSTVVDALCKEGKITEAHDV 301
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGR-----ISKAIETLFDMPSYNCW-PSVKTFN 167
+ + + G NV+ M G + +A++ +FD +N + P+V ++N
Sbjct: 302 VDMMIIR-------GVEPNVVTYNALMDGHCLQSEMDEAVK-VFDTMVHNGYAPNVISYN 353
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
++N + + ++ + + + N L+ C G L+ A + E
Sbjct: 354 TLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAH 412
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
P++ TY L+ LC+K +++EA LL+ +E +D D + I+I G+ + G++E
Sbjct: 413 GQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAA 472
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+ + KG PN +Y ++ GL + EA +L M SP +Y + G
Sbjct: 473 RDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQG 532
Query: 348 LCNQKLVEDVDWVLKKMVQQGF 369
L K +L++M+ +GF
Sbjct: 533 LLQNKEALRAIQLLQEMLARGF 554
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 130/294 (44%), Gaps = 7/294 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY-NVIKIYGNMAGRISKA 147
P+ +YT II+ L + ++ ++ ++ + + D F Y ++I N+ K
Sbjct: 207 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGIS--PDIFTYTSLIHSLCNLCEW--KH 262
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
+ TL + M + P V F+ V++ L E + GVE + N L+
Sbjct: 263 VTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMD 322
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C ++ A V D PNV +Y+TL++G C+ +++A L E M + +
Sbjct: 323 GHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP 382
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+TVT+N L+ G++++ + L M G P+ A+Y+ +L L K EA L+
Sbjct: 383 NTVTYNTLMHXCHV-GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALL 441
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ M P Y +I G+C +E + + +G P + + ++
Sbjct: 442 KTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMI 495
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 1/142 (0%)
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+++A RM TV FN L++ + K + L +M G P+ +
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ R A ++ +++ P ++ LI GLC + + D + KM+ +G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169
Query: 369 FVPRMGMWREIV-GCVTFGKDN 389
F P + + ++ G G N
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTN 191
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 179/402 (44%), Gaps = 34/402 (8%)
Query: 5 SHFARNHRQSIIQSLSSAST----ITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTE 60
S+F+ S S+SS + + K + L+SP+ H L P
Sbjct: 26 SNFSSQPHPSSPLSISSNTDPFPELVSKISIILSSPTWERSSELSHLIP-----KLKPHH 80
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
V+ + + SV+ + S+ + + + + ++N+L + + F +++ RI +
Sbjct: 81 VVNLLDTHNNTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNV--RILMI 138
Query: 121 KLCRFSDGFFYNVIKIYGNMA-----GRISKAIETL------FDMPSYN----------- 158
K CR ++G VI++ + G + TL FDM
Sbjct: 139 KSCR-NEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSG 197
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
P++ TFN ++ +L + E + I G D L+ G C+NGNL+ AF
Sbjct: 198 IRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAF 257
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ D K C+PN TYS L++GLC +G +EEA +LE M +GI+ + I I L
Sbjct: 258 EMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSL 317
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
G+ E +KLL +MK +GC PN +Y ++ GL +F A + +M+ + + P+
Sbjct: 318 CDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTA 377
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+Y LI+ L + E + + M+ +P + I+
Sbjct: 378 VTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVII 419
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 4/303 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y+ +IN L R + D+++ + + + + ++ + AGR +A
Sbjct: 269 DPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCD--AGRSCEA 326
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ L M C P+V+T+ +++ L + G+Y G+ A + L+
Sbjct: 327 VKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQ 386
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L G E A + + + PN TY+ ++ G C G +++A + ++M G +
Sbjct: 387 LYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPN 446
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+NI+I KQG + M+LLE MKG G ++ +Y ++ G + A L
Sbjct: 447 VITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFN 506
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
M+ +SP+ V+Y +I+G V+D + KMV+ G VP G + ++ F K
Sbjct: 507 EMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMIS--GFSK 564
Query: 388 DNR 390
NR
Sbjct: 565 TNR 567
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 136/298 (45%), Gaps = 2/298 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K++ PN YT +I+ L++ +F+ + ++ + L + + + ++Y + G
Sbjct: 334 KKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLY--VEG 391
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R A+ M S++ P+ +T+N+++ S + I+ K G + N
Sbjct: 392 RFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYN 451
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ + G + A +L+ + + TY+ L+ G G +E AF L M
Sbjct: 452 IIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEH 511
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI + VT+N +I+G KV++ + L +M G P+S +Y ++ G R EA
Sbjct: 512 GISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEA 571
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ G+M+ + + P+ ++Y I GLC + +M ++ + P + + ++
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLI 629
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 134/293 (45%), Gaps = 6/293 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y +II+ + + +++ +K L + + N+I + G++ A
Sbjct: 444 SPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGL-KLDTWTYANLISGFSR-GGKLEHA 501
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M + P+V T+N ++N ++ + ++ + G + N+++ G
Sbjct: 502 FSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISG 561
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ + A + KQ PNV TY++ + GLC+ G AF + M+ +
Sbjct: 562 FSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPN 621
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T++ LI GL ++G+ E+ +LL+ GC PN +Y ++ GL K R EA +LV
Sbjct: 622 LCTYSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVE 677
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + + PS Y+ L+ G C VE + MV GF P + ++ ++
Sbjct: 678 SMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALI 730
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 6/247 (2%)
Query: 131 YNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN I I G + ++ A+ + M PS T+N++++ E +
Sbjct: 520 YNAI-INGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKM 578
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
K G+ + + GLC+NG AF + E K++ PN+ TYS+L+ GLC++G
Sbjct: 579 VKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQA 638
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E+A ER+ +G + + T+ L+ GL +G+ E +L+E MK KG P+ Y+ +
Sbjct: 639 EDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRAL 694
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L G A ++ M+ P YK LI LC + + + M+++ +
Sbjct: 695 LVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHW 754
Query: 370 VPRMGMW 376
+W
Sbjct: 755 NSDEVVW 761
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 127/299 (42%), Gaps = 20/299 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P Y+ +IN+L RF+ I + + + YNVI G I KA
Sbjct: 375 PTAVTYSALINQLYVEGRFETALTIFEWMLSHD--SLPNTETYNVIIKGFCSIGYIQKAT 432
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-------GVEIDACCL 201
M P+V T+N+++++ QG +A +L G+++D
Sbjct: 433 AIFDQMLKAGPSPNVITYNIIIHIYFK-------QGYMNNAMRLLEMMKGNGLKLDTWTY 485
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G G LE AF + +E + PNV TY+ +++G V++A L +M
Sbjct: 486 ANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVE 545
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + T+N++ISG K ++ E +M +G PN +Y + GL R
Sbjct: 546 SGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSL 605
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ++ M P+ +Y LI GLC + ED + +++ G P + + +V
Sbjct: 606 AFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAE----RLLDDGCEPNVDTYTTLV 660
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 123/288 (42%), Gaps = 4/288 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + +I L + E IM I C D F Y + I G + A
Sbjct: 200 PNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGAC--PDTFTYTSLIIGHCKNGNLDLAF 257
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M C P+ T++ ++N L S E + G+E I + L
Sbjct: 258 EMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSL 317
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G A +L + K+ C PNV+TY+ L+ GL G E A G+ +M ++G+
Sbjct: 318 CDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTA 377
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ LI+ L +G+ E + + E M PN+ +Y ++ G +A + +
Sbjct: 378 VTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQ 437
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
M+ SP+ ++Y +IH Q + + +L+ M G ++ W
Sbjct: 438 MLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGL--KLDTW 483
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 144/313 (46%), Gaps = 14/313 (4%)
Query: 74 VISVLNQYSKRKDYNPNEALYTL--IINKLAQAKRFDAIEDIMQRIKVEKL---CRFSDG 128
VI VL++ + D+ YTL L Q +FD ++ + + + +E L R +
Sbjct: 150 VIQVLSEINTTYDFG-----YTLYSFSTLLIQLGKFD-MDGLGRDVYIEMLNSGIRPNLF 203
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF-NLVLNLLVSAKLYGEIQGIYT 187
F +IKI N G++ +A + + Y P T+ +L++ + L + ++
Sbjct: 204 TFNAMIKILCN-KGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFE-MFD 261
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
K G + ++ + L+ GLC G LE A +L+E + EP V Y+ + LC+ G
Sbjct: 262 RMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAG 321
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
EA LL +M+ G + T+ LISGL + GK E + + +M G P + +Y
Sbjct: 322 RSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYS 381
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ L + RF A + M+ P+ +Y +I G C+ ++ + +M++
Sbjct: 382 ALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKA 441
Query: 368 GFVPRMGMWREIV 380
G P + + I+
Sbjct: 442 GPSPNVITYNIII 454
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 8/262 (3%)
Query: 88 NPNEALYTLIINK-LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+PN Y IIN L AK DA+ + ++ + S G YN++ + RIS+
Sbjct: 514 SPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVP--SSGT-YNMMISGFSKTNRISE 570
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A M P+V T+ ++ L I+ K + C + L+
Sbjct: 571 AENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLID 630
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ G E A +LD+ CEPNV TY+TL+ GLC KG EA L+E M+ +G+
Sbjct: 631 GLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQP 686
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ L+ G K +VE +K+ + M G P + Y+ ++ L +A+ +
Sbjct: 687 SEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMF 746
Query: 327 GRMICERMSPSFVSYKKLIHGL 348
M+ + + V + L+ GL
Sbjct: 747 QTMLKKHWNSDEVVWTVLLDGL 768
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 89 PNEALYTLIINKLAQAKR----FDAIEDIMQRIKVEKLCRFS---DGFFYNVIKIYGNMA 141
PN YT I+ L + R F ++ +R LC +S DG
Sbjct: 585 PNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLC---------QE 635
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+ A L D C P+V T+ ++ L E + S K G++
Sbjct: 636 GQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIY 691
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
LL G C+N +E+A + D +P + Y L+ LC+ ++A + + M
Sbjct: 692 RALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLK 751
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
+ ++D V + +L+ GL K+G+ + ++LL M+ + C N
Sbjct: 752 KHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLN 792
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 150/308 (48%), Gaps = 3/308 (0%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
S + +L++ + K PN Y+ +++ + +D ++ ++ + S G YN
Sbjct: 366 SAVRMLDEMEE-KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQG--YN 422
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
I G++ +A + +M S C P + T+N ++ L + L E + I+ + +
Sbjct: 423 GIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEE 482
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GV + N L+ L NG + + E C+ +V +Y+ L+ LC++GNV+ +
Sbjct: 483 GVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRS 542
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LLE M ++GI + ++N+LI+ L K GKV + ++L + M +G P+ +Y ++ G
Sbjct: 543 MALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLING 602
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L A L+ ++ E + P V+Y LI C +L++D +L K + G VP
Sbjct: 603 LCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPN 662
Query: 373 MGMWREIV 380
W +V
Sbjct: 663 ERTWGMMV 670
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 137/295 (46%), Gaps = 6/295 (2%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ +L+Q +R +P+ Y ++++ LA+A + +R+ +++ + F + V
Sbjct: 126 LHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTT--FTFGVA 183
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
GR A+ L M + C P + V++ LV+ E + +G
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D N L+ GLC G + A ++D Q C P+V TY L+ GLC +EA
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+L R+ + + V N +I G +GK+ +L E M KGC P+ +Y +++GL
Sbjct: 304 MLGRLP----EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
RF A ++ M + +P+ V+Y L+H C + +D +L +M+ +GF
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGF 414
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 10/284 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ LY +I+ L ++ + + + F V+ + G GR+ +A
Sbjct: 210 PDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCG--LGRVREAA 267
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG--VEIDACCLNILLK 206
+ M + C PSV T+ +L L + E + A LG E++ LN +++
Sbjct: 268 RLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADE------ACAMLGRLPEVNVVMLNTVIR 321
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G G L A + + + C P+V TYS LMHGLC+ G A +L+ ME +G
Sbjct: 322 GCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAP 381
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ VT++ L+ + G ++ +L++M KG NS Y ++Y L + +A LV
Sbjct: 382 NIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLV 441
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
M + P +Y +I+ LCN L+E+ + + + ++++G V
Sbjct: 442 QEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVV 485
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 122/239 (51%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR A+ L +M C P++ T++ +L+ ++ + + + G +++
Sbjct: 362 GRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGY 421
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ LC++G L+ A ++ E Q C+P++ TY+T+++ LC +EEA + +
Sbjct: 422 NGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIE 481
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EG+ A+ +T+N LI L + G+ +EG++L M GC + SY ++ L +
Sbjct: 482 EGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDR 541
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ L+ M+ + + P+ SY LI+ LC V D + K+M+ QG P + + ++
Sbjct: 542 SMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 600
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 117/279 (41%), Gaps = 45/279 (16%)
Query: 145 SKAIETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A+ L MP + PS +++N+VL+ L A + + +Y + V +
Sbjct: 123 GRALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 182
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+ LC G A +L + C P+ Y T++H L +G V EA LL+ M G
Sbjct: 183 AARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMG 242
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
AD TFN L+ GL G+V E +L++RM +GC P+ +Y +L GL ++ EA
Sbjct: 243 CAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEAC 302
Query: 324 ELVGRM--------------------------ICERMS-----PSFVSYKKLIHGLCNQK 352
++GR+ + E M P +Y L+HGLC
Sbjct: 303 AMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLG 362
Query: 353 LVEDVDWVLKKMVQQGFVP-------------RMGMWRE 378
+L +M ++G P R GMW +
Sbjct: 363 RFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDD 401
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 73/146 (50%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +++ L +M + P+ ++N+++N L A + + G+ D
Sbjct: 537 GNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTY 596
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC+ G AA +L++ P +N P++ TY+ L+ C+ +++A LL++ S
Sbjct: 597 NTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAIS 656
Query: 262 EGIDADTVTFNILISGLRKQGKVEEG 287
GI + T+ +++ +Q EG
Sbjct: 657 GGIVPNERTWGMMVQNFVRQTVNLEG 682
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 144/310 (46%), Gaps = 24/310 (7%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+L + +RK NPN Y+ +IN + ++F E++ E L R G N I
Sbjct: 306 LLQEMLERK-INPNVVTYSALINAYVKERKFFEAEELYD----EMLPR---GIIPNTITY 357
Query: 137 YGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ G R+ A + M + C P V TFN +++ AK + + +
Sbjct: 358 NSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTE 417
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ D N L+ G C G+L AA + + P++ T +TL+ GLC+ G +++
Sbjct: 418 TGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 477
Query: 252 AFGLLERMESE-----------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
A + + M+ G++ D T+NILISGL +GK E +L + M +G
Sbjct: 478 ALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIV 537
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
PN+ +Y ++ GL + R EA ++ M + SP V++ L+ G C V+D +
Sbjct: 538 PNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLEL 597
Query: 361 LKKMVQQGFV 370
+M ++G V
Sbjct: 598 FCEMGRRGIV 607
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 169/379 (44%), Gaps = 53/379 (13%)
Query: 53 KDWLSPTEV-----LKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
+D L P ++ + + D +S +++L + + PN +Y+ II+ L + R
Sbjct: 206 EDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRH 265
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
++ ++ + + F D F YN + +GR S+A L +M P+V T++
Sbjct: 266 SDAHNLYTEMQEKGI--FPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYS 323
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
++N V + + E + +Y G+ + N ++ G C+ L+AA ++ +
Sbjct: 324 ALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATK 383
Query: 228 NCEPNV-----------------------------------RTYSTLMHGLCEKGNVEEA 252
C P+V TY+TL+HG C G++ A
Sbjct: 384 GCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAA 443
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-----------GCYP 301
L ++M S G+ D VT N L+ GL GK+++ +++ + M+ G P
Sbjct: 444 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEP 503
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ +Y ++ GL+++ +F EA+EL M + P+ ++Y +I+GLC Q +++ +
Sbjct: 504 DVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMF 563
Query: 362 KKMVQQGFVPRMGMWREIV 380
M + F P + + +V
Sbjct: 564 DSMGSKSFSPDVVTFNTLV 582
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 5/219 (2%)
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
V +FN+++ S + KLG + D + LL GLC + A LD
Sbjct: 112 VYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEA---LD 168
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
F Q C PNV T++TLM+GLC +G V EA LL+RM +G+ + +T+ ++ G+ K G
Sbjct: 169 LF-HQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIG 227
Query: 283 KVEEGMKLLERMKGKG-CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
+ LL +M+ PN Y ++ GL R +A L M + + P +Y
Sbjct: 228 DTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTY 287
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+I G C+ + +L++M+++ P + + ++
Sbjct: 288 NCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALI 326
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 109/233 (46%), Gaps = 9/233 (3%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ AI+ DM PSV FN ++ ++V + + +Y + + D NI
Sbjct: 58 LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+K C L A + K +P+V T+STL+HGLC + V EA L +M
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM---- 173
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VTF L++GL ++G+V E + LL+RM G PN +Y ++ G+ A
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233
Query: 324 ELVGRMICERMS---PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
L+ +M E MS P+ V Y +I GL D + +M ++G P +
Sbjct: 234 NLLRKM--EEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDL 284
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 128/297 (43%), Gaps = 19/297 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I+ + R DA E M + K C D F +N + A RI
Sbjct: 352 PNTITYNSMIDGFCKQNRLDAAEH-MFYVMATKGCS-PDVFTFNTLIDGYCGAKRIDDGT 409
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILL 205
E L +M T+N +++ L G++ + ++ GV D N LL
Sbjct: 410 ELLHEMTETGLVADTTTYNTLIHGFC---LVGDLNAALDLSQQMISSGVCPDIVTCNTLL 466
Query: 206 KGLCENGNLEAAFYVLDEF-----------PKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
GLC+NG L+ A + P EP+V+TY+ L+ GL +G EA
Sbjct: 467 DGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEE 526
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L + M GI +T+T++ +I+GL KQ +++E ++ + M K P+ ++ ++ G
Sbjct: 527 LYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYC 586
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
R + EL M + ++Y LIHG + + ++M+ G P
Sbjct: 587 KAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYP 643
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K +P+ + +I+ AKR D +++ + L +D YN + I+G + G
Sbjct: 383 KGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGL--VADTTTYNTL-IHGFCLVGD 439
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL----------- 192
++ A++ M S P + T N +L+ L + ++ + K
Sbjct: 440 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFN 499
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GVE D NIL+ GL G A + E P + PN TYS++++GLC++ ++EA
Sbjct: 500 GVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEA 559
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ + M S+ D VTFN L+SG K G+V++G++L M +G ++ +Y +++G
Sbjct: 560 TQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHG 619
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
A ++ MI + P ++ + ++
Sbjct: 620 FRKVGNINGALDIFQEMISSGVYPDTITIRSML 652
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 85/168 (50%)
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
P P V+T+N++++ L++ + E + +Y G+ + + ++ GLC+ L
Sbjct: 497 PFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRL 556
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A + D ++ P+V T++TL+ G C+ G V++ L M GI AD +T+ L
Sbjct: 557 DEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITL 616
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
I G RK G + + + + M G YP++ + + +L L K+ A
Sbjct: 617 IHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRA 664
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G E LE A + + + P+V ++ LM + + L ++ME +
Sbjct: 48 LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +FNILI K+ + ++ G P+ ++ +L+GL + R EA
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+L +M P+ V++ L++GLC + V + +L +MV+ G P + IV
Sbjct: 168 DLFHQMC----RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 220
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 72/154 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+ +A E +MP P+ T++ ++N L E ++ S D
Sbjct: 519 GKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTF 578
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C+ G ++ + E ++ + TY TL+HG + GN+ A + + M S
Sbjct: 579 NTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMIS 638
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
G+ DT+T +++ L + +++ + +LE ++
Sbjct: 639 SGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 145/309 (46%), Gaps = 3/309 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y +I+ R+ + ++ ++ E + D + +N++ GRI +A L
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENV--DPDDYTFNILIDALCKEGRILEAQGVLAM 290
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P + T+N ++ S + E + ++ K G+E D N+L+ G C+
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + E +N P + +Y++L+ GLC G + LL+ M D VT+NI
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI L K+G++ E + +L M KG PN +Y ++ G + AK++ RM+
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNR 392
+ P ++Y LI+G C ++V++ + K+M + +P + + ++ G G+ +
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530
Query: 393 VYVTETVDS 401
+ E DS
Sbjct: 531 ELLDEMCDS 539
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 120/256 (46%), Gaps = 37/256 (14%)
Query: 161 PSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P++ TFN ++N ++ ++ + A+ G D L+ GL +NG ++AA +
Sbjct: 123 PNLVTFNTIINGFCINGMIFKALDFCQNLLAQ-GYLFDQFTYGTLINGLSKNGQIKAALH 181
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL------------------------ 255
+L E K + +PN+ YS L+ GLC+ G V +A GL
Sbjct: 182 LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCC 241
Query: 256 -----------LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
L +M E +D D TFNILI L K+G++ E +L M +G P+
Sbjct: 242 SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV 301
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ G ++ EA+EL RM+ + P ++Y LI G C K+V++ + K++
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 365 VQQGFVPRMGMWREIV 380
+ VP + + ++
Sbjct: 362 CNKNLVPTIASYNSLI 377
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 143/320 (44%), Gaps = 34/320 (10%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLCRFSDGFFYNVIKIYGN 139
Y +IN L++ + A ++Q ++ ++ LC+ DGF + + +
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK--DGFVSDALGLCSQ 220
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ R L D +YN +++ S + E+ + T + V+ D
Sbjct: 221 IGER-----GILLDAVTYNS---------LIDGCCSVGRWQEVTQLLTKMVRENVDPDDY 266
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NIL+ LC+ G + A VL K+ +P++ TY+ LM G C + NV EA L RM
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G++ D + +N+LI G K V+E M L + + K P ASY ++ GL + R
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
K+L+ M P V+Y LI LC + + + VL M+++G P + + +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 380 VGCVTFGKDNRNRVYVTETV 399
+ G RN V V + +
Sbjct: 447 MD----GYCLRNNVNVAKDI 462
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 2/281 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+ Y PN + IIN D Q + + D F Y + + G+
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGY--LFDQFTYGTLINGLSKNGQ 175
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I A+ L +M + P++ ++ +++ L + G+ + + G+ +DA N
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNS 235
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C G + +L + ++N +P+ T++ L+ LC++G + EA G+L M G
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D VT+N L+ G + V E +L RM +G P+ +Y ++ G K EA
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAM 355
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
L + + + P+ SY LI GLCN + V +L +M
Sbjct: 356 VLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM 396
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 139/303 (45%), Gaps = 12/303 (3%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL SKR + P+ Y ++ + ++ R+ L D YNV+ I
Sbjct: 287 VLAMMSKRGE-KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL--EPDVLNYNVL-I 342
Query: 137 YGNMAGRISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
G ++ LF ++ + N P++ ++N +++ L ++ ++ +
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D NIL+ LC+ G + A VL K+ +PN+ TY+ +M G C + NV A +
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
RM G++ D + +N+LI+G K V+E + L + M+ K P+ ASY ++ GL +
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
R P +EL+ M SP ++Y L+ C + + + +++V+ G+
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-------GI 575
Query: 376 WRE 378
W +
Sbjct: 576 WPD 578
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 132/297 (44%), Gaps = 3/297 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K+ P A Y +I+ L + R ++ ++ + + D YN++ GRI
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA--QPPDVVTYNILIDALCKEGRI 421
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ L M P++ T+N +++ + I+ K G+E D N+L
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVL 481
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C+ ++ A + E +N P++ +Y++L+ GLC G + LL+ M G
Sbjct: 482 INGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ 541
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+NIL+ K ++ + L ++ +G +P+ + ++ L ++ A++
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAED 600
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ ++ SP+ +Y LI+ LC + +L KM P + I+G
Sbjct: 601 ALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIG 657
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P F+ +L +V Y ++T G+ IL+ + AF +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L K +PN+ T++T+++G C G + +A + + ++G D T+ LI+GL K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+++ + LL+ M+ PN Y ++ GL +A L ++ + V+
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LI G C+ ++V +L KMV++ P
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDP 263
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 19/257 (7%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
LR+ ++V + + P+ Y ++IN + + D + + ++ + L D
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL--IPD 509
Query: 128 GFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
YN +I N+ GRI E L +M P V T+N++L+ + + + ++
Sbjct: 510 IASYNSLIDGLCNL-GRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLF 568
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G+ D + ++ LC+ L+ A L C PNV+TY+ L++ LC+
Sbjct: 569 RQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKD 627
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC------- 299
G+ EA LL +ME D +TF I+I L ++ + ++ KL E M +G
Sbjct: 628 GSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSL 687
Query: 300 -------YPNSASYQEV 309
+P S+ +Q V
Sbjct: 688 NQSHNVFFPASSGFQSV 704
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 103/247 (41%), Gaps = 3/247 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K PN Y +++ + +DI R+ L D YNV+
Sbjct: 433 KKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL--EPDILNYNVLINGYCKTEM 490
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +AI +M N P + ++N +++ L + +Q + G D NI
Sbjct: 491 VDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL C+ + A + + + P+ T ++ LC+ ++ A L+ + G
Sbjct: 551 LLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ T+ ILI+ L K G E M LL +M+ P++ +++ ++ LL + +A+
Sbjct: 610 CSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAE 669
Query: 324 ELVGRMI 330
+L MI
Sbjct: 670 KLREEMI 676
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 68/172 (39%)
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C N++ A + + P + L+ + G+ A L +++S+GI
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
TF ILI+ Q LL + G PN ++ ++ G +A +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ + +Y LI+GL ++ +L++M + P + M+ ++
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALI 202
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
H C NV++A RM T F+ L+ + + G + L +++ KG
Sbjct: 28 HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVDW 359
P+ A++ ++ + A L+ ++ P+ V++ +I+G C N + + +D+
Sbjct: 88 PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147
Query: 360 VLKKMVQQGFV 370
+ ++ QG++
Sbjct: 148 C-QNLLAQGYL 157
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 152/332 (45%), Gaps = 26/332 (7%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
I +VL Q + K P+ Y ++++ L + + I+ +K +C D Y
Sbjct: 343 IEAETVLKQMTD-KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC--PDAVTY 399
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ G++ A L +M NC P+ T N++L+ L E + + +
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVL-----------------------DEFPKQN 228
G +D NI++ GLC +G L+ A ++ D + N
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
C P++ TYSTL++GLC+ G EA L M E + D+V +NI I KQGK+
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
++L+ M+ KGC+ + +Y ++ GL K + E L+ M + +SP+ +Y I L
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYL 639
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C + VED +L +M+Q+ P + ++ ++
Sbjct: 640 CEGEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 23/250 (9%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+ +A L M PS+ ++N++++ L + + + I + GV DA
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
LL G C G ++AA +L E + NC PN T + L+H L + G + EA LL +M
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG----------------------- 298
+G DTVT NI++ GL G++++ +++++ M+ G
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C P+ +Y +L GL RF EAK L M+ E++ P V+Y IH C Q +
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 359 WVLKKMVQQG 368
VLK M ++G
Sbjct: 580 RVLKDMEKKG 589
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 103/201 (51%), Gaps = 4/201 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PSV +NL+L + + + +Y G+ N+L++ LC++ ++AA +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
DE P++ C+PN T+ L+ G C+ G ++ LL MES G+ + V +N ++S +
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM----SP 336
+G+ ++ K++E+M+ +G P+ ++ + L + + +A + M + P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 337 SFVSYKKLIHGLCNQKLVEDV 357
+ ++Y ++ G C L+ED
Sbjct: 290 NSITYNLMLKGFCKVGLLEDA 310
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 37/273 (13%)
Query: 134 IKIYGNMA-GRISKAIETLFD--MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
++++G+ A G + + L D + NC P + T++ +LN L A + E + ++
Sbjct: 492 MRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMM 551
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
++ D+ NI + C+ G + +AF VL + K+ C ++ TY++L+ GL K +
Sbjct: 552 GEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIF 611
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY---- 306
E GL++ M+ +GI + T+N I L + KVE+ LL+ M K PN S+
Sbjct: 612 EIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Query: 307 ------------QEV-------------LYG-----LLDKKRFPEAKELVGRMICERMSP 336
QEV LY LL + +A EL+ ++
Sbjct: 672 EAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
YK L+ LC + +E +L KM+ +G+
Sbjct: 732 GTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 22/307 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC--------RFS----DGFFYNVIKI 136
PN+ +Y I++ + R D E ++++++ E L R S +G + +I
Sbjct: 215 PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ +M ++ +P P+ T+NL+L L + + ++ S +
Sbjct: 275 FSDME------LDEYLGLPR----PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
NI L+GL +G A VL + + P++ +Y+ LM GLC+ G + +A ++
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M+ G+ D VT+ L+ G GKV+ LL+ M C PN+ + +L+ L
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
R EA+EL+ +M + V+ ++ GLC ++ ++K M G +
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 377 REIVGCV 383
+G V
Sbjct: 505 NSYIGLV 511
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 37/325 (11%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L D +++ ++ KR P+ Y +++ + DA + ++Q + + C +
Sbjct: 377 LSDAKTIVGLM----KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM-MRNNC-LPN 430
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA----KLYGEIQ 183
+ N++ GRIS+A E L M T N++++ L + K ++
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 184 G--IYTSAA--KLGVE---------IDACCL------NILLKGLCENGNLEAAFYVLDEF 224
G ++ SAA LG I+ CL + LL GLC+ G A + E
Sbjct: 491 GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ +P+ Y+ +H C++G + AF +L+ ME +G T+N LI GL + ++
Sbjct: 551 MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
E L++ MK KG PN +Y + L + ++ +A L+ M+ + ++P+ S+K L
Sbjct: 611 FEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYL 670
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGF 369
I C V D D M Q+ F
Sbjct: 671 IEAFCK---VPDFD-----MAQEVF 687
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 121/248 (48%), Gaps = 15/248 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ ++N L +A RF +++ + EKL D YN+ + G+IS A
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL--QPDSVAYNIFIHHFCKQGKISSAF 579
Query: 149 ETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L DM C S++T+N L+L L + +++ EI G+ + G+ + C N ++
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIF-EIHGLMDEMKEKGISPNICTYNTAIQY 638
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES-----E 262
LCE +E A +LDE ++N PNV ++ L+ C+ + + A + E S E
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKE 698
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ ++++ + L G++ + +LLE + +G + Y++++ L K A
Sbjct: 699 GL------YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVA 752
Query: 323 KELVGRMI 330
++ +MI
Sbjct: 753 SGILHKMI 760
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+LL+ + +E ++ + P T++ L+ LC+ V+ A L + M
Sbjct: 116 NLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPE 175
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G + TF IL+ G K G ++G++LL M+ G PN Y ++ + R +
Sbjct: 176 KGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDD 235
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++++V +M E + P V++ I LC + V D + M
Sbjct: 236 SEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 15/240 (6%)
Query: 140 MAGRISKAIETLFDMPSYNCWP-SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
+A RI K I F PS S+ + +LV AK++ EIQ ++ L I
Sbjct: 18 LAWRIFKRI---FSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLI--LSSSIQK 72
Query: 199 CCLNILLKGL---CENGNLEAAF----YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
L+ LL + ++ +++ AF V FP+ +P+V Y+ L+ ++ VE
Sbjct: 73 TKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPEN--KPSVYLYNLLLESCIKERRVEF 130
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
L + M GI T TFN+LI L V+ +L + M KGC PN ++ ++
Sbjct: 131 VSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVR 190
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G + EL+ M + P+ V Y ++ C + +D + +++KM ++G VP
Sbjct: 191 GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVP 250
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 127/281 (45%), Gaps = 2/281 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +IN + D + + D YN I A + KA+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGI--LPDVVTYNSIIAALCKAQAMDKAM 251
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M P T+N +L+ S+ E G GVE D ++L+ L
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+NG A + D K+ +P + TY TL+ G KG + E GLL+ M GI D
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
F+ILI KQGKV++ M + +M+ +G PN+ +Y V+ L R +A +
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
MI E +SP + Y LIHGLC E + ++ +M+ +G
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 138/321 (42%), Gaps = 5/321 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + + +T ++ L KR DI+ R E C + F YN++ R
Sbjct: 115 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGC-IPNVFSYNILLKGLCDENR 173
Query: 144 ISKAIETLFDMP---SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+A+E L M P V ++ V+N + Y G+ D
Sbjct: 174 SQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVT 233
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ LC+ ++ A VL+ K P+ TY++++HG C G +EA G L++M
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+G++ D VT+++L+ L K G+ E K+ + M +G P +Y +L G K
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E L+ M+ + P + LI Q V+ V KM QQG P + ++
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 381 GCVT-FGKDNRNRVYVTETVD 400
G + G+ +Y + +D
Sbjct: 414 GILCKSGRVEDAMLYFEQMID 434
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 129/273 (47%), Gaps = 2/273 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +P+ +++++I A+ + D + +++ + L + Y + +GR
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL--NPNAVTYGAVIGILCKSGR 421
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ M P +N +++ L + + + + G+ ++ N
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C+ G + + + + + +PNV TY+TL++G C G ++EA LL M S G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ +TVT++ LI+G K ++E+ + L + M+ G P+ +Y +L GL +R AK
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
EL R+ +Y ++HGLC KL +D
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 147/326 (45%), Gaps = 17/326 (5%)
Query: 70 DPISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIM 114
D +S +V+N + K D + P+ Y II L +A+ D +++
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ + D YN I +G+ +AI L M S P V T++L+++ L
Sbjct: 255 NTMVKNGV--MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLC 312
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E + I+ S K G++ + LL+G G L +LD + P+
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHY 372
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
+S L+ ++G V++A + +M +G++ + VT+ +I L K G+VE+ M E+M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+G P + Y +++GL ++ A+EL+ M+ + + + + +I C + V
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + + MV+ G P + + ++
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLI 518
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 113/280 (40%), Gaps = 35/280 (12%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D Y+++ Y GR +A + M P + T+ +L + E+ G+
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G+ D +IL+ + G ++ A V + +Q PN TY ++ LC+
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGL---------------------------- 278
G VE+A E+M EG+ + +N LI GL
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 479
Query: 279 -------RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
K+G+V E KL E M G PN +Y ++ G + EA +L+ M+
Sbjct: 480 NSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS 539
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P+ V+Y LI+G C +ED + K+M G P
Sbjct: 540 VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 139/335 (41%), Gaps = 41/335 (12%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG-FFYNVIKIYG-NM 140
+++ NPN Y +I L ++ R +ED M + S G YN + I+G
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGR---VEDAMLYFEQMIDEGLSPGNIVYNSL-IHGLCT 453
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ +A E + +M + FN +++ E + ++ ++GV+ +
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVIT 513
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C G ++ A +L +PN TYSTL++G C+ +E+A L + ME
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEME 573
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK--- 317
S G+ D +T+NI++ GL + + +L R+ G ++Y +L+GL K
Sbjct: 574 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 633
Query: 318 --------------------------------RFPEAKELVGRMICERMSPSFVSYKKLI 345
R EAK+L + P++ +Y+ +
Sbjct: 634 DALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 693
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ Q L+E++D + M G GM IV
Sbjct: 694 ENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 2/239 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R PN Y +IN A + D ++ + L + + + +I Y ++ R
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL-KPNTVTYSTLINGYCKIS-R 561
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ +M S P + T+N++L L + + +Y + G +I+ NI
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L GLC+N + A + + + RT++ ++ L + G +EA L S G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ + T+ ++ + QG +EE +L M+ GC +S ++ LL + A
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
>gi|357148282|ref|XP_003574702.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 448
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 156/334 (46%), Gaps = 4/334 (1%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
S T +L + RDP + + + + N + + +L+ A+R D +E+I+++
Sbjct: 81 SETPLLVRIKHERDPKRLYELFRANAHNRLLVENRFAFQDAVARLSGARRNDLVEEILEQ 140
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
K R +GF +I +YG A A+ T +M Y C + K+FN L +L+ A
Sbjct: 141 HKALPQGR-REGFVVRIIGLYGK-ARMPEHALRTFQEMEMYGCTCTNKSFNATLKVLMQA 198
Query: 177 KLYGE-IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+L+ E +Q K GVE+D N ++K +C+ G L AA+ V+ E K+ +P+V T
Sbjct: 199 QLFDEALQLFEEGPGKYGVELDDISYNTVVKMMCDMGELRAAYRVMQEMEKEGIQPDVIT 258
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y+TLM + G E GL M G ++N+ I L + + + L+ +M
Sbjct: 259 YTTLMAAFYKNGQREVGDGLWNLMRLRGCMPTLASYNVRIQFLINRRRGWQANDLVRKMY 318
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
G P+ +Y V+ G + AK + G M P+ Y+ ++H LC ++ +
Sbjct: 319 AAGIRPDEITYNLVIKGFFMMREHEMAKTVFGAMHGRGCKPNGKIYQTMVHYLCERREFD 378
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKD 388
+ K ++ + P + ++ G ++ KD
Sbjct: 379 LAFRLCKDSMENNWFPSVDTIHHLLKGLMSISKD 412
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C P++ ++N+ + L++ + + + G+ D N+++KG E A
Sbjct: 287 CMPTLASYNVRIQFLINRRRGWQANDLVRKMYAAGIRPDEITYNLVIKGFFMMREHEMAK 346
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
V + C+PN + Y T++H LCE+ + AF L + T + L+ GL
Sbjct: 347 TVFGAMHGRGCKPNGKIYQTMVHYLCERREFDLAFRLCKDSMENNWFPSVDTIHHLLKGL 406
Query: 279 ---RKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
K E MKL+ K ++Q++L
Sbjct: 407 MSISKDRNAGEIMKLVMGRKSSYSGDEVRAFQDIL 441
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 134/279 (48%), Gaps = 3/279 (1%)
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM 154
TL+ ++AK DA++ + +K + D Y+ I G + A++ L M
Sbjct: 15 TLLSGLCSKAKIMDAVKLFDEMVK---MGHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
C P+V +N +++ L +L E ++ K G+ D + +L G C G +
Sbjct: 72 EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRV 131
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
A + + ++N PN T++ L+ GLC+K + EA+ + E M +G++ D T+N L
Sbjct: 132 NEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNAL 191
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
+ G + +++E KL M KGC PN SY ++ G R EAK L+ M + +
Sbjct: 192 VDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+P +Y L+ G C ++ +LK+M G +P +
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNL 290
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 154/325 (47%), Gaps = 6/325 (1%)
Query: 49 KLNHK-DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
K+ H+ D ++ + ++ + + + +L + + K PN Y II+ L + +
Sbjct: 38 KMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM-EEKGCKPNVVAYNTIIDSLCKDRLV 96
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF 166
D + E + D F Y+ ++ + N+ GR+++A M N P+ TF
Sbjct: 97 TEAMDFFSEMVKEGIP--PDVFTYSSILHGFCNL-GRVNEATSLFKQMVERNVIPNKVTF 153
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
++++ L ++ E ++ + + G+E D N L+ G C ++ A + + +
Sbjct: 154 TILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDR 213
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+ C PNVR+Y+ L++G C+ G ++EA GLL M + + D T++ L+ G + G+ +E
Sbjct: 214 KGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQE 273
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+LL+ M G PN +Y VL GL EA EL+ M ++ P+ Y LI
Sbjct: 274 AQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIE 333
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
G+C +E + + +G P
Sbjct: 334 GMCTFGKLEAARELFSNLFVKGIQP 358
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 100/190 (52%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
KLG++ N LL GLC + A + DE K EP+V TYST+++GLC+ GN
Sbjct: 3 KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A LL++ME +G + V +N +I L K V E M M +G P+ +Y +L
Sbjct: 63 MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+G + R EA L +M+ + P+ V++ LI GLC ++++ + V + M ++G
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLE 182
Query: 371 PRMGMWREIV 380
P + + +V
Sbjct: 183 PDVYTYNALV 192
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 146/302 (48%), Gaps = 3/302 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ Y+ IIN L + ++++++ EK C+ + YN I +++
Sbjct: 41 HEPDVITYSTIINGLCKMGNTTMALQLLKKME-EKGCK-PNVVAYNTIIDSLCKDRLVTE 98
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A++ +M P V T++ +L+ + E ++ + V + IL+
Sbjct: 99 AMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILID 158
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ + A+ V + ++ EP+V TY+ L+ G C + ++EA L M+ +G
Sbjct: 159 GLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAP 218
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ ++NILI+G K G+++E LL M K P+ +Y ++ G R EA+EL+
Sbjct: 219 NVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELL 278
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTF 385
M + P+ ++Y ++ GLC +++ +LK M + P + ++ ++ G TF
Sbjct: 279 KEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTF 338
Query: 386 GK 387
GK
Sbjct: 339 GK 340
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 151/325 (46%), Gaps = 5/325 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + + +L F NL S+ Q +R + PN+ +T++I+ L + + +
Sbjct: 114 DVFTYSSILHGFCNLGRVNEATSLFKQMVER-NVIPNKVTFTILIDGLCKKRMISEAWLV 172
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNL 172
+ + + L D + YN + + G + + LF+ M C P+V+++N+++N
Sbjct: 173 FETMTEKGL--EPDVYTYNAL-VDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILING 229
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
+ E +G+ + + D + L++G C+ G + A +L E PN
Sbjct: 230 HCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPN 289
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ TYS ++ GLC+ G+++EAF LL+ M+ I+ + + ILI G+ GK+E +L
Sbjct: 290 LITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFS 349
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+ KG P +Y ++ GLL EA EL M P+ +Y +I G
Sbjct: 350 NLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNG 409
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWR 377
+ ++++MV +GF +R
Sbjct: 410 DTPNAVRLIEEMVGKGFSADSSTFR 434
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 116/261 (44%), Gaps = 37/261 (14%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK PN Y ++IN ++ R D + ++ + + L D F Y+ + GR
Sbjct: 213 RKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLT--PDIFTYSTLMRGFCQVGR 270
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A E L +M SY P++ T+++VL+
Sbjct: 271 PQEAQELLKEMCSYGLLPNLITYSIVLD-------------------------------- 298
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
GLC++G+L+ AF +L + EPN+ Y+ L+ G+C G +E A L + +G
Sbjct: 299 ---GLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKG 355
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I VT+ ++ISGL K G E +L M GC PNS +Y ++ G L P A
Sbjct: 356 IQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAV 415
Query: 324 ELVGRMICERMSPSFVSYKKL 344
L+ M+ + S +++ L
Sbjct: 416 RLIEEMVGKGFSADSSTFRML 436
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 109/214 (50%), Gaps = 2/214 (0%)
Query: 161 PSVKTFNLVLNLLVS-AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P++ TFN +L+ L S AK+ ++ ++ K+G E D + ++ GLC+ GN A
Sbjct: 8 PTLVTFNTLLSGLCSKAKIMDAVK-LFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQ 66
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+L + ++ C+PNV Y+T++ LC+ V EA M EGI D T++ ++ G
Sbjct: 67 LLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFC 126
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
G+V E L ++M + PN ++ ++ GL K+ EA + M + + P
Sbjct: 127 NLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVY 186
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+Y L+ G C++ +++ + M ++G P +
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNV 220
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 177/373 (47%), Gaps = 38/373 (10%)
Query: 37 SASHQDSD---HHAYKLNHKDWLSP-TEVLK-IFSNLRDPISVISVLNQYSKRKDYNPNE 91
S + QD D A L + +W P ++++K I N P++V+ + + + + +PN
Sbjct: 86 STAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNS 145
Query: 92 ALYTLI-------------INKLAQAKRFD----------AIEDIMQRIKVEKLCRFSDG 128
++ ++ +N K F+ + D+++ KVE + DG
Sbjct: 146 VIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDG 205
Query: 129 FFYNVI----KIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+ + Y NM G + A L +M C P++ T+N+++ L A+L
Sbjct: 206 MCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARL 265
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
E + S G+ D +IL+ G C A +L E +P TY+
Sbjct: 266 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNA 325
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+ G +G++E+AF + + M + GI+A+ + +N L++G+ K GK+E+ +++++ M KG
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
P+S +Y ++ G + A EL+ M +++P+ ++Y +I+GLC ++ +
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 445
Query: 359 WVLKKMVQQGFVP 371
+L++MV G P
Sbjct: 446 AILREMVMNGLKP 458
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 156/334 (46%), Gaps = 37/334 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +YT ++ A+ R + I++R++ + + D F YN + I A R+ +A
Sbjct: 458 PNAVVYTTLMTAHAKEGRVEESRMILERMREQGI--LPDVFCYNSLIIGFCKAKRMEEAR 515
Query: 149 ETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQ--------GIYTSA---- 189
L +M P+ T+ ++ + ++ + + E+ GIYT+
Sbjct: 516 TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGH 575
Query: 190 AKLG----------------VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
K G V D ++L+ GL NG + AF + E ++ PN
Sbjct: 576 CKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 635
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY++L+ G C++GNV++A LLE M +GI+ D VT+NILI GL K G++E L +
Sbjct: 636 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD 695
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
++G+G PN +Y ++ G K A +L+ M+ + P Y +++ C ++
Sbjct: 696 IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEK 755
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
E + ++M+++GF + I G GK
Sbjct: 756 FEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGK 789
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 142/293 (48%), Gaps = 4/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKA 147
P+ Y ++IN KR + E + +++ + + YN + I G M G I +A
Sbjct: 283 PDLYTYDILINGFCMEKR--SREAKLMLLEMIDVGLKPEPITYNAL-IDGFMRQGDIEQA 339
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M + ++ +N +LN + A + I + GVE D+ ++L++G
Sbjct: 340 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 399
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C N+ AF +LDE K+ P V TYS +++GLC GN++ +L M G+ +
Sbjct: 400 HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPN 459
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + L++ K+G+VEE +LERM+ +G P+ Y ++ G KR EA+ +
Sbjct: 460 AVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM 519
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ R+ P+ +Y I G +E D +M+ G +P +G++ ++
Sbjct: 520 EMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALI 572
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 133/310 (42%), Gaps = 12/310 (3%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+L++ KRK P Y++IIN L + I++ + + L + Y +
Sbjct: 412 LLDEMKKRK-LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGL--KPNAVVYTTLMT 468
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
GR+ ++ L M P V +N ++ AK E + + +
Sbjct: 469 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 528
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+A + G + G +E A +E PNV Y+ L+ G C++GNV EAF +
Sbjct: 529 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 588
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ S + D T+++LI GL + GK+ E + ++ KG PN+ +Y ++ G +
Sbjct: 589 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 648
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+A +L+ M + ++P V+Y LI GLC +E + + +G P
Sbjct: 649 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPN---- 704
Query: 377 REIVGCVTFG 386
CVT+
Sbjct: 705 -----CVTYA 709
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL L + +E + V D P+V TY+ ++ C+ GNV++A +L M
Sbjct: 184 NSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGE 243
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G + VT+N++I GL + ++E ++L M KG P+ +Y ++ G +KR E
Sbjct: 244 KGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSRE 303
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
AK ++ MI + P ++Y LI G Q +E + +MV G + +W ++
Sbjct: 304 AKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLN 363
Query: 382 CV 383
V
Sbjct: 364 GV 365
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 130/296 (43%), Gaps = 15/296 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K NP+ Y ++I+ L +A + +++ I+ G N + + G
Sbjct: 664 KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE-------GRGLTPNCVTYAAMVDGYC 716
Query: 145 -----SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ A + L +M P +N++LN + + + ++ + G
Sbjct: 717 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STV 775
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L++G C++G L+ A ++L+E ++ PN TY++L+ C+ G + EA L M
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ + T+ L+ G G + E L E M KG P+ +Y ++ +
Sbjct: 836 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 895
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
EA +L ++ + M S +Y LI LC ++ +V +L ++ + GF R+G+
Sbjct: 896 MEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGF--RLGL 949
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + +A +M N P+ KT+ +L+ + E+ ++ G+E D
Sbjct: 822 AGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMT 881
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+++ C GN+ A + DE + +V Y L+ LC+K E LL +
Sbjct: 882 YYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIG 941
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
G T +++ G + G ++E ++L M G N+ S +++ G
Sbjct: 942 ESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 139/290 (47%), Gaps = 8/290 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVE--KLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
Y ++I ++ + D+ ++ + +K++ + ++ GF N + AGR+ +A +
Sbjct: 103 YNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNAL----GKAGRVQEA-RSF 157
Query: 152 FD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
FD M P++ T+NL+++ G++ + G + NILL LC
Sbjct: 158 FDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCS 217
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G + AA + + C P+ TYSTL++GL + G VEEA + M G+ D V
Sbjct: 218 AGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVN 277
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+N L++ L K G ++ KL++ M KG +P++ S+ ++ L + A+E+ RM+
Sbjct: 278 YNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMV 337
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P +SY LI +L++MV+ GF+P + ++
Sbjct: 338 ESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLI 387
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 117/236 (49%), Gaps = 1/236 (0%)
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+I YG + A + S+ C P+V F ++++LV++ + + +Y +
Sbjct: 36 LITAYGR-GNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQK 94
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G ++D N+L++ +G L++A + E + EP+ TY L++ L + G V+EA
Sbjct: 95 GCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEA 154
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ M G+ + T+N+L+ RK G+++ + L MK +G P+ +Y +L
Sbjct: 155 RSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDA 214
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
L R A++L +M + SP +Y L++GL VE+ V ++MV +G
Sbjct: 215 LCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 2/235 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y+ ++N L ++ R + + + + + D YN + AG + +
Sbjct: 237 SPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVA--VDLVNYNSLLATLAKAGNMDRV 294
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ + +M P +FN +++ L A + ++ + G + D NIL+
Sbjct: 295 WKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDS 354
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
G+ A +L+E + P +TY++L+H L G V+EAF +LE ME+ G D
Sbjct: 355 YARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPD 414
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
VT+N L+ L K+G+ + +L ++MK KG P++ SY + GL R EA
Sbjct: 415 VVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEA 469
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 129/298 (43%), Gaps = 2/298 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
KR+ + P+ Y ++++ L A R A + ++ + D + Y+ + +G
Sbjct: 197 KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCS--PDSYTYSTLVNGLGKSG 254
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ +A + +M + +N +L L A + + ++ G DA N
Sbjct: 255 RVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFN 314
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++ L + +AA V + C+P++ +Y+ L+ G+ +A +LE M
Sbjct: 315 TIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEA 374
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G +T T+N LI L G+V+E +LE M+ GC P+ +Y ++ L + A
Sbjct: 375 GFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRA 434
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L +M + + P +SY I GL +++ + K M G M+R ++
Sbjct: 435 ARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 122/289 (42%), Gaps = 12/289 (4%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-----FYNVIKIYGNMAG 142
PN Y L+++ + + D + +K GF YN++ AG
Sbjct: 167 TPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRR-------GFQPSVVTYNILLDALCSAG 219
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A + M C P T++ ++N L + E ++ GV +D N
Sbjct: 220 RVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYN 279
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
LL L + GN++ + ++ E ++ P+ +++T+M L + + A + RM
Sbjct: 280 SLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVES 339
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D +++NILI + G + ++LE M G P + +Y +++ L + EA
Sbjct: 340 GCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEA 399
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ M P V+Y +L+ L + + + ++M +G P
Sbjct: 400 FAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEP 448
>gi|224114227|ref|XP_002316702.1| predicted protein [Populus trichocarpa]
gi|222859767|gb|EEE97314.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 145/254 (57%), Gaps = 8/254 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK-VEKLCRFSDGFFYNVIKIYGNMAGR 143
+D+ +Y I++LA A++F+ +E+I++ K E + + +GF +I +YG +AG
Sbjct: 53 EDFRTKTFVYKNSIHRLAAARKFNYVEEILEDQKQYEDI--YKEGFNARLISLYG-VAGM 109
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACCLN 202
A + +M C +V +FN +L V++K + E +G++ +K L +E D N
Sbjct: 110 FDNARKVFDEMFERKCARTVVSFNALLGACVNSKKFDEAEGLFKGLSKELEIEPDLVSYN 169
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+LK CE G++++A +LDE K+ EP++ T++TL+HG KG + + E+M+ +
Sbjct: 170 TVLKAFCEMGSMDSAATLLDEMEKKGLEPDLITFNTLLHGFYAKGRFVDGERIWEQMKEK 229
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
++ D ++N + GL + ++E+ +K++E MK +G ++ SY ++ G +++ +A
Sbjct: 230 NVEPDIRSYNAKLLGLTLEKRMEDVVKVVEEMKSEGIQLDTFSYSTLIRGFVNEGDLKKA 289
Query: 323 KEL---VGRMICER 333
K +GR C+R
Sbjct: 290 KHWYHEIGRSGCKR 303
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 153/310 (49%), Gaps = 10/310 (3%)
Query: 64 IFSNLRDPISVISVLNQY-SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL 122
+ L D V+ L + + KD P+ YT +++ L +A +FD + +++ + V +
Sbjct: 98 LMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREM-VAQG 156
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV----SAKL 178
C F +I G +A L D+ S F ++ L S +L
Sbjct: 157 CAPDTVTFSTLIDGLCKF-GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVEL 215
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
++ G+ + G N+++ G C+ +L++A+ +L+ ++ C PNV T++
Sbjct: 216 ASKVLGVVIAK---GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTI 272
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+ GLC+ V EA LLE+M G + VT++ +I+GL KQG+V++ +L + M+ +
Sbjct: 273 LITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 332
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C PN ++ ++ GL KR EA++L RM +P ++Y LI GLC V++
Sbjct: 333 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 392
Query: 359 WVLKKMVQQG 368
+ + + + G
Sbjct: 393 QLFQTIPESG 402
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 157/351 (44%), Gaps = 51/351 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-----AGR 143
PN+ Y ++I + A D +++ +K S GF N + M AGR
Sbjct: 55 PNKFTYGILIRGFSSAGDLDIAIQLLEEMK-------SSGFEGNAVVHTTLMKGLCDAGR 107
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+E F + +C P V T+ +++ L A + E QG+ G D +
Sbjct: 108 VVEALEH-FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFST 166
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQN---------------CE------------------ 230
L+ GLC+ G+ E AF VL++ ++ C
Sbjct: 167 LIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAK 226
Query: 231 ---PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
P V ++ +++G C+ +++ A+ LLE M +G + TF ILI+GL K +V E
Sbjct: 227 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEA 286
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+LLE+M GC PN +Y V+ GL + + +A EL M P+ V++ LI G
Sbjct: 287 QQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDG 346
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRNRVYVT 396
LC K +E+ + +M + G P + + ++ C +F D +++ T
Sbjct: 347 LCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQT 397
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 156/351 (44%), Gaps = 38/351 (10%)
Query: 89 PNEALYTLIINKL----AQAKRFDAIEDIMQR----------IKVEKLCR---------- 124
P+ ++ +I+ L ++ + F +ED++QR +++LC
Sbjct: 159 PDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASK 218
Query: 125 -----FSDGF-----FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ GF +N++ A + A + L M C P+V TF +++ L
Sbjct: 219 VLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLC 278
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
A GE Q + G + + ++ GLC+ G ++ A+ + ++NC PNV
Sbjct: 279 KANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVV 338
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T++ L+ GLC+ +EEA L RM G D +T+N LI GL K +V+E +L + +
Sbjct: 339 THNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 398
Query: 295 KGKGC-YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
G N+ +Y + +G R +A + ++ + SP +Y LI C
Sbjct: 399 PESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSR 458
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVDSLAS 404
+V ++++M +GF PR+ ++G + G + + DS+A+
Sbjct: 459 AVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAI---QLFDSMAA 506
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 145/358 (40%), Gaps = 56/358 (15%)
Query: 77 VLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK 121
V+N + K KD + PN +T++I L +A R + +++++ V
Sbjct: 238 VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM-VMG 296
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
C + + VI G++ A E M NC P+V T N++++ L AK E
Sbjct: 297 GCSPNVVTYSTVINGLCKQ-GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 355
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP-NVRTYSTLM 240
+ +Y + G D N L+ GLC++ ++ AF + P+ N TYSTL
Sbjct: 356 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 415
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI------------------------- 275
HG G + +A + + +G D T+ LI
Sbjct: 416 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 475
Query: 276 ----------SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
GL + E ++L + M +GC ++ Y V+ G+ + +A +
Sbjct: 476 PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAV 535
Query: 326 VGRMICER---MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++I +R +PS + L+ LC +D +L KM ++GF + + ++
Sbjct: 536 LEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLL 593
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+++G + +C N L LC + A + + C PN TY L+ G G++
Sbjct: 16 SRVGHNVFSC--NCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDL 73
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+ A LLE M+S G + + V L+ GL G+V E ++ M K C P+ +Y +
Sbjct: 74 DIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTAL 132
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
++ L +F EA+ ++ M+ + +P V++ LI GLC E VL+ ++Q+G
Sbjct: 133 VHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGM 192
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 3/221 (1%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S P V T + VL L ++ S A G DA N++++G+
Sbjct: 469 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 528
Query: 214 LEAAFYVLDEF---PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
+ A VL++ + P+ L+ LC+ G ++A LL +M G A +
Sbjct: 529 HDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSS 588
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+N L+SGL + + +E ++ E M G P ++ V+ L + +A ELV RM
Sbjct: 589 YNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMS 648
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P + LI G C + +L++M + G P
Sbjct: 649 KLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEP 689
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 144/342 (42%), Gaps = 39/342 (11%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLC 123
L Q +R++ PN + ++I+ L +AKR + + R++ ++ LC
Sbjct: 324 LFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLC 383
Query: 124 R---FSDGF-FYNVIKIYGNMA----------------GRISKAIETLFDMPSYNCWPSV 163
+ + F + I G A GR++ A + P +
Sbjct: 384 KSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDL 443
Query: 164 KTF-NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
T+ +L+L +++ ++ + A+K G L+ +L GL E + E A + D
Sbjct: 444 ATYTSLILEYCKTSRAVEVVELVEEMASK-GFPPRVNTLSAVLGGLFEGNHTERAIQLFD 502
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM---ESEGIDADTVTFNILISGLR 279
+ C + Y+ ++ G+ ++A +LE++ + + + L+ L
Sbjct: 503 SMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLC 562
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
+ GK ++ +LL +M +G +SY +L GL +R+ EA ++ M+ +P
Sbjct: 563 QVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEIS 622
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ +I LC+ V+D ++++M + G P + ++G
Sbjct: 623 TVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIG 664
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS------DGFFYNVIKIYGNMAGRISK 146
+Y L++ +A+A + D +++++ ++ +F+ D ++ ++ G+
Sbjct: 515 IYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQV-----GKTDD 569
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A + L M +V ++N +L+ L + + E ++ + G + +N+++
Sbjct: 570 AKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVIS 629
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC ++ A+ ++ K C P++ T +TL+ G C+ G + A LLE M G++
Sbjct: 630 WLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEP 689
Query: 267 DTVTFNIL 274
+ T ++L
Sbjct: 690 NDTTHDLL 697
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 19/270 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-- 142
K ++P+ A YT +I + + R + ++++ + S GF V + + G
Sbjct: 437 KGFSPDLATYTSLILEYCKTSRAVEVVELVEEMA-------SKGFPPRVNTLSAVLGGLF 489
Query: 143 ---RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI-----QGIYTSAAKLGV 194
+AI+ M + C +NLV+ + A + + Q I K
Sbjct: 490 EGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNP 549
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
A ++ L++ LC+ G + A +L + ++ V +Y+ L+ GL +EA
Sbjct: 550 SSSA--VDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQ 607
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ E M S G + T N++IS L KV++ +L++RM GC P+ + ++ G
Sbjct: 608 VFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYC 667
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKL 344
R A++L+ M + P+ ++ L
Sbjct: 668 KSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 142/283 (50%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PNE Y ++I+ + + + ++ + L + YN++ G++ +A+
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGL--RPNVVTYNILINGLCSDGKVDEAV 283
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M S + P+V T N+++N K E ++ K GV+ +A L+
Sbjct: 284 ALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAY 343
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++G +E AF + + + P V TY+ L+ GLC KG+V+ A L+ M S+ + AD
Sbjct: 344 CKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADV 403
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+NILI L K+G+ + +KLL+ M KG P+ +Y ++ G + A + R
Sbjct: 404 VTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTR 463
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + + V++ LI G C + +ED + +L +M+++G VP
Sbjct: 464 MERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVP 506
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 146/288 (50%), Gaps = 19/288 (6%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMA--GRISKAIET 150
+ +++N L + + + D+++ +KV + + YN +I Y M G++ KA
Sbjct: 158 FNIVVNGLCKVGKLNRAGDVIEDMKVWGVS--PNVITYNTLIDGYCKMGRIGKMYKADAI 215
Query: 151 LFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
L +M + P+ T+N+++ N+ + +++GE+Q + G+ + NI
Sbjct: 216 LKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQ-------RQGLRPNVVTYNI 268
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC +G ++ A + D+ + EPNV T++ L++G C+ V EA L ME +G
Sbjct: 269 LINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG 328
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+D + +T+ LI K G++E+ L M +G +P ++Y ++ GL K A+
Sbjct: 329 VDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAAR 388
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ M+ +++S V+Y LI LC + +L +M ++G P
Sbjct: 389 SLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNP 436
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 147/315 (46%), Gaps = 25/315 (7%)
Query: 97 IINKLAQAKRFDAIEDIMQR-IKVEK----------LCRFSDGFFYN-------VIKIYG 138
I+N LA K++ I + + +K EK + D F N V+
Sbjct: 38 ILNSLAHTKKYSKIRSFLDKFVKYEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVR 97
Query: 139 NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
N+ +I + E Y S+ + N +L+ LV G+++ +Y K +E++
Sbjct: 98 NL--KILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNV 155
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF---GL 255
NI++ GLC+ G L A V+++ PNV TY+TL+ G C+ G + + + +
Sbjct: 156 ISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAI 215
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
L+ M ++GI + VT+NILI G K V M++ M+ +G PN +Y ++ GL
Sbjct: 216 LKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCS 275
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
+ EA L +M+ + P+ V++ LI+G C K V + + M +QG P
Sbjct: 276 DGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMT 335
Query: 376 WREIVGCVTFGKDNR 390
+ ++ + KD R
Sbjct: 336 YTTLID--AYCKDGR 348
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 135/293 (46%), Gaps = 26/293 (8%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
+R+ PN Y ++IN L + D A+ D M +E + +NV+ I G
Sbjct: 255 QRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLE-----PNVVTHNVL-INGF 308
Query: 140 MAGR-ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
+ +++AI DM P+ T+ +++ + +Y G+ +
Sbjct: 309 CKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEV 368
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N L+ GLC G+++AA +++E + +V TY+ L+ LC+KG +A LL+
Sbjct: 369 STYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDE 428
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M +G++ VT+N L+ G ++G + + + RM+ KG N ++ ++ G K R
Sbjct: 429 MFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGR 488
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A L+ M+ + P+ +Y + + ++M+++GFVP
Sbjct: 489 LEDANGLLNEMLERGLVPNRTTY----------------EIIKEEMMEKGFVP 525
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 2/166 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P + Y +I L + A +M + +KL +D YN++ G KA+
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLS--ADVVTYNILIDSLCKKGESRKAV 423
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M PS T+N +++ + T + G + + N+L+KG
Sbjct: 424 KLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGF 483
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
C G LE A +L+E ++ PN TY + + EKG V + G
Sbjct: 484 CLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPDIEG 529
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 169/367 (46%), Gaps = 29/367 (7%)
Query: 19 LSSASTITRKRTFALASPSASHQDSDHHAY-KLNHKDWLSPTEVLKIFSNLRDPISVISV 77
+S A + + A SP ++ H + K+ D E LKIF
Sbjct: 26 MSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELD-----EALKIFDG---------- 70
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
+ ++ + P+ Y +IN +A + D + I+QR+ E L D YN +
Sbjct: 71 ----AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENL--VPDVVTYNSLVNG 124
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
GR+ +A + D P+V T++ L+ L + E ++ S K G E
Sbjct: 125 LCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEP 181
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ NIL+ GL + + AF + K EP+ TY+ + GLC+ G VE+A +L
Sbjct: 182 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 241
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ M+ +G D V+ N +I+GL K+ +V+E LL M+ KGC PN+ S+ ++ G
Sbjct: 242 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 301
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL---VEDVDWVLKKMVQQGFVPRM 373
++ +A M+ + P+ V+Y L+ GLC + +++ + M+++G VP +
Sbjct: 302 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDV 361
Query: 374 GMWREIV 380
+ ++
Sbjct: 362 VTYSALI 368
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 134/290 (46%), Gaps = 19/290 (6%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
+E LK+F SVL Q Y P Y ++I+ L + R + ++ +
Sbjct: 165 SEALKLFG---------SVLKQ-----GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLV 210
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
L D Y V AGR+ A+ L DM C P V + N V+N L K
Sbjct: 211 KHGL--EPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKR 268
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
E + + + G +A N L+ G C G + A E K+ +P V TY+
Sbjct: 269 VDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNI 328
Query: 239 LMHGLC---EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
L+ GLC ++G ++EA L + M +G D VT++ LI GL K GK+++ +LL M+
Sbjct: 329 LVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAME 388
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
KGC PN +Y ++ GL ++ EA EL M+ + P ++Y +I
Sbjct: 389 AKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 117/251 (46%), Gaps = 33/251 (13%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + WP+ T+N +L+ L + + Q +Y K G D N LL G C+ G
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A + D K+ P+V TY+ L++G C+ ++EA +L+RM SE + D VT+N
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 274 LISGLRKQGKVE---------------------------------EGMKLLERMKGKGCY 300
L++GL K G+V+ E +KL + +G
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYE 180
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P +Y ++ GLL + R EA EL ++ + P ++Y I GLC VED +
Sbjct: 181 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 240
Query: 361 LKKMVQQGFVP 371
LK M ++G VP
Sbjct: 241 LKDMDEKGCVP 251
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 5/191 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +IN L + KR D E ++ ++ K C + +N + AG+ KA+
Sbjct: 251 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEA-KGCS-PNAISFNTLICGQCRAGKWKKAM 308
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ---GIYTSAAKLGVEIDACCLNILL 205
T +M P+V T+N++++ L A+ G I+ ++ + + G D + L+
Sbjct: 309 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 368
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GL + G L+ A +L + C PNV TY++L+ GLC V+EA L M +G
Sbjct: 369 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCV 428
Query: 266 ADTVTFNILIS 276
DT+T+ +IS
Sbjct: 429 PDTITYGTIIS 439
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G + +T+N L+SGL G++ + L ERM G P+ +Y +L+G
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
EA ++ + P V+Y LI+G C +++ +L++MV + VP + +
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 379 IV-GCVTFGKDNRNRVYVTE 397
+V G G+ + R+ + +
Sbjct: 121 LVNGLCKNGRVDEARMLIVD 140
>gi|296089005|emb|CBI38708.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 158/335 (47%), Gaps = 21/335 (6%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQY-SKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
+L PT++ ++ ++P++ + + N+ SK +Y N +Y +IN L + R + ++
Sbjct: 8 FLIPTQLSQMIRTQKNPLTALKIFNEAKSKFPNYRHNGPVYATMINVLGSSGRIAEMREV 67
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ ++K + C D F +V+K Y AG + +A+ +P +NC +FN +L +L
Sbjct: 68 IDQMKQDS-CECKDSVFSSVMKTYAR-AGMVDEAVSLFKTLPQFNCVNWTGSFNTLLRIL 125
Query: 174 V-------SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
V + +L+ E + +++G LN+L+ LC+ + A +V E
Sbjct: 126 VKESKLETACRLFLEHSCGWEVKSRIGS------LNLLMDALCQINRSDLALHVFQEMRY 179
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEA----FGLLERMESEGIDADTVTFNILISGLRKQG 282
Q C P+ +Y LM GLCE G + EA + + R+ +G D + L+ L G
Sbjct: 180 QCCSPDKESYRILMRGLCEDGRLNEATHLLYSMFWRISQKGGGEDIAAYRTLLDALCDNG 239
Query: 283 KVEEGMKLLERMKGKGC-YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
VEE +++L ++ KG P L + + K L+ + PS SY
Sbjct: 240 HVEEALEILGKVLKKGLKAPKRCRGHLDLSYCCNGEDIERTKGLINEALIRGGVPSMASY 299
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ L +++ + + + VL +M +GF P + ++
Sbjct: 300 SAMAIDLYSERKIGEANQVLDEMRDRGFKPSLSIY 334
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 124/294 (42%), Gaps = 9/294 (3%)
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM- 154
L+++ L Q R D + Q ++ + C D Y ++ GR+++A L+ M
Sbjct: 156 LLMDALCQINRSDLALHVFQEMRYQ--CCSPDKESYRILMRGLCEDGRLNEATHLLYSMF 213
Query: 155 ---PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+ + +L+ L E I K G++ C L C N
Sbjct: 214 WRISQKGGGEDIAAYRTLLDALCDNGHVEEALEILGKVLKKGLKAPKRCRGHLDLSYCCN 273
Query: 212 G-NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G ++E +++E + P++ +YS + L + + EA +L+ M G
Sbjct: 274 GEDIERTKGLINEALIRGGVPSMASYSAMAIDLYSERKIGEANQVLDEMRDRGFKPSLSI 333
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGK-GCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+ I+ L + K + LE+M + GC + +Y ++ GL RF EA ++ RM
Sbjct: 334 YEAKIAALCRW-KSAFAVGYLEKMARQVGCVADKETYSILVDGLCCDGRFVEASGILERM 392
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ SP +Y LI GLC D L++MV QG +P + +W +V V
Sbjct: 393 LIRSSSPGVETYNTLIRGLCLMGRQYDAVIWLEEMVVQGKLPAVSVWDSLVASV 446
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE-GIDADTVTFNILISGL 278
VLDE + +P++ Y + LC + A G LE+M + G AD T++IL+ GL
Sbjct: 318 VLDEMRDRGFKPSLSIYEAKIAALC-RWKSAFAVGYLEKMARQVGCVADKETYSILVDGL 376
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
G+ E +LERM + P +Y ++ GL R +A + M+ + P+
Sbjct: 377 CCDGRFVEASGILERMLIRSSSPGVETYNTLIRGLCLMGRQYDAVIWLEEMVVQGKLPAV 436
Query: 339 VSYKKLIHGLCN 350
+ L+ +C+
Sbjct: 437 SVWDSLVASVCS 448
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 150/319 (47%), Gaps = 5/319 (1%)
Query: 56 LSPTEVLKIF-SNLRDPISVISVLNQYSKRK-DYNPNEALYTLIINKLAQAKRFDAIEDI 113
LSP +V + + R + +++ R+ Y ++ +++ L+ + D +
Sbjct: 90 LSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRV 149
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ R+ + + R F ++ Y AG++ A+ L M C P + N+ +N+L
Sbjct: 150 V-RLMIRRGVRRGTEQFAQLMLSYSR-AGKLRSAMRVLHLMQKDGCAPDISICNMAVNVL 207
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
V A + ++GVE D N L+KGLC + A ++ + C P+
Sbjct: 208 VVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDK 267
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESE-GIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+Y T+M LC++ VEE GLL+RM ++ G+ D VT+N+LI GL K G +E ++ L
Sbjct: 268 ISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLR 327
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+GK + Y +++ R EAKE+VG MI + P V+Y ++ G C
Sbjct: 328 ESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIG 387
Query: 353 LVEDVDWVLKKMVQQGFVP 371
++ ++K M + P
Sbjct: 388 ELDQARKMMKHMYKNDCKP 406
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 145/288 (50%), Gaps = 11/288 (3%)
Query: 89 PNEALYTLIINKLAQAKRFD-AIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
P+ ++ + +N L A R D A+E + M+R+ VE D + YN + A R+
Sbjct: 195 PDISICNMAVNVLVVAGRVDKALEFAERMRRVGVE-----PDVYTYNCLIKGLCGARRVV 249
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACCLNIL 204
A+E + M C P ++ V++ L K E++G+ G+ D N+L
Sbjct: 250 DAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVL 309
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GL ++G+ + A L E + + YS ++H C G + EA ++ M S+G
Sbjct: 310 IHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGC 369
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VT++ ++ G + G++++ K+++ M C PN+ ++ +L GL + EA E
Sbjct: 370 QPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWE 429
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQQGFVP 371
L+ + E +PS ++Y ++HG + KL E D V+ +M+Q+GF P
Sbjct: 430 LLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVV-QMLQKGFFP 476
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 136/277 (49%), Gaps = 3/277 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P++ Y +++ L + KR + + ++QR++ + F D YNV+ I+G G +A
Sbjct: 265 PDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGL-FPDQVTYNVL-IHGLAKHGHADEA 322
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E L + ++ +++ E + I G + D + ++ G
Sbjct: 323 LEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDG 382
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C G L+ A ++ K +C+PN T++ L++GLC+ G EA+ LL + E E
Sbjct: 383 FCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPS 442
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+++++ G R++GK++E ++ +M KG +P + +++ L ++ EAK+ +
Sbjct: 443 DITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFME 502
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+ + + + V++ +IHG Q +E ++ M
Sbjct: 503 QCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDM 539
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 141/293 (48%), Gaps = 4/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGRISKA 147
P++ Y ++I+ LA+ D + ++ ++ + RF D Y+ I + GR+++A
Sbjct: 301 PDQVTYNVLIHGLAKHGHAD---EALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEA 357
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E + +M S C P V T++ V++ + + + K + + LL G
Sbjct: 358 KEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNG 417
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G A+ +L++ ++ P+ TYS +MHG +G ++E+ ++ +M +G
Sbjct: 418 LCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPT 477
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TV N+LI L K K E +E+ + KGC N ++ V++G + A L+
Sbjct: 478 TVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMD 537
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M P V+Y ++ L + +++ +++KM+ +G +P +R ++
Sbjct: 538 DMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVI 590
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 102/209 (48%), Gaps = 4/209 (1%)
Query: 142 GRISKAIETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G+ S+A E L + W PS T+++V++ E + + G
Sbjct: 422 GKTSEAWE-LLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVE 480
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+N+L+ LC++ A +++ + C NV ++T++HG +G++E A L++ M
Sbjct: 481 INLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMY 540
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
D VT+ +++ L K+G+++E L+E+M +G P +Y+ V++ +K
Sbjct: 541 LSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLE 600
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLC 349
+ L+ +M+ + S +Y +++ LC
Sbjct: 601 DLLNLLEKMLARQEMKS--AYNQVVEKLC 627
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 162/376 (43%), Gaps = 73/376 (19%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++VL++ R+ P +Y +I+ + F + +++ + C G V+
Sbjct: 179 LAVLDEM-PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG-CALDVGNCNLVL 236
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+ G + +A+ L D+PS+ C P V ++N VL L AK +G +Q + ++
Sbjct: 237 NAICDQ-GSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMAC 295
Query: 195 EIDACCLNILLK-----------------------------------GLCENGNLEAAFY 219
+ N L+ G+C+ G+LE A
Sbjct: 296 PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHE 355
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGL-----------------------------------C 244
+L+ P +PNV Y+TL+ GL C
Sbjct: 356 ILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFC 415
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ G V+ LLE+M G D +T+ +I+G K+G ++E + LL+ M GC PN+
Sbjct: 416 QNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTI 475
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
SY VL GL +R+ +A++L+ +MI + + +++ LI+ LC + LVE +LK+M
Sbjct: 476 SYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 535
Query: 365 VQQGFVPRMGMWREIV 380
+ G P + + ++
Sbjct: 536 LVNGCSPDLISYSTVI 551
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 150/326 (46%), Gaps = 37/326 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLCRFSDGFFYNVI 134
P+ Y ++ L AKR+ ++++M+ + + LCR +G F V
Sbjct: 262 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCR--NGLFERVH 319
Query: 135 KIYGNMA---------------------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
++ M G + A E L MPSY P+V +N +L L
Sbjct: 320 EVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGL 379
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
SA+ + E + + +D NIL+ C+NG ++ +L++ + C P+V
Sbjct: 380 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDV 439
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY+T+++G C++G ++EA LL+ M + G +T+++ I++ GL + + L+ +
Sbjct: 440 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 499
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M +GC N ++ ++ L K +A EL+ +M+ SP +SY +I GL
Sbjct: 500 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 559
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREI 379
++ +L MV +G P ++ I
Sbjct: 560 TDEALELLNVMVNKGMSPNTIIYSSI 585
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++ L A+R++ E+++ + +K C D F N++ + G + + I
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEM-FDKDCPLDDVTF-NILVDFFCQNGLVDRVI 424
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M + C P V T+ V+N L E + S G + + I+LKGL
Sbjct: 425 ELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 484
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C A ++ + +Q C N T++TL++ LC+KG VE+A LL++M G D
Sbjct: 485 CSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 544
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++++ +I GL K GK +E ++LL M KG PN+ Y + L + R + ++
Sbjct: 545 ISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDN 604
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + V Y +I LC + E L MV G VP
Sbjct: 605 IQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 647
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 99/201 (49%)
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
G+++ AA + V +A +++ LC G + A VLDE P++ C P Y +
Sbjct: 141 GQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVI 200
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ C G A +LE + + G D N++++ + QG V+E + LL + GC
Sbjct: 201 LEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGC 260
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P+ SY VL GL KR+ +EL+ M+ P+ V++ LI LC L E V
Sbjct: 261 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHE 320
Query: 360 VLKKMVQQGFVPRMGMWREIV 380
VL +MV+ G P + M+ I+
Sbjct: 321 VLAQMVEHGCTPDIRMYATII 341
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GRI+ A+ L +MP C P ++++L + + G +D
Sbjct: 173 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNC 232
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK---GNVEEAFGLLER 258
N++L +C+ G+++ A ++L + P CEP+V +Y+ ++ GLC G V+E L+E
Sbjct: 233 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEE 289
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M + VTFN LIS L + G E ++L +M GC P+ Y ++ G+ +
Sbjct: 290 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 349
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A E++ RM + P+ V Y L+ GLC+ + E+ + +L +M
Sbjct: 350 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 395
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 141/284 (49%), Gaps = 2/284 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD ++ + ++++ Q D + ++++++ +E C D Y + G I
Sbjct: 398 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LEHGC-MPDVITYTTVINGFCKEGLI 455
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ L M + C P+ ++ +VL L SA+ + + + + + + G ++ N L
Sbjct: 456 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 515
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ LC+ G +E A +L + C P++ +YST++ GL + G +EA LL M ++G+
Sbjct: 516 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 575
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+T+ ++ + S L ++G++ + +++ + ++ ++ Y V+ L + A E
Sbjct: 576 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 635
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ M+ P+ +Y LI GL ++ V++ +L ++ +G
Sbjct: 636 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 150/319 (47%), Gaps = 5/319 (1%)
Query: 56 LSPTEVLKIF-SNLRDPISVISVLNQYSKRK-DYNPNEALYTLIINKLAQAKRFDAIEDI 113
LSP +V + + R + +++ R+ Y ++ +++ L+ + D +
Sbjct: 90 LSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRV 149
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ R+ + + R F ++ Y AG++ A+ L M C P + N+ +N+L
Sbjct: 150 V-RLMIRRGVRRGTEQFAQLMLSYSR-AGKLRSAMRVLHLMQKDGCAPDISICNMAVNVL 207
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
V A + ++GVE D N L+KGLC + A ++ + C P+
Sbjct: 208 VVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDK 267
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESE-GIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+Y T+M LC++ VEE GLL+RM ++ G+ D VT+N+LI GL K G +E ++ L
Sbjct: 268 ISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLR 327
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+GK + Y +++ R EAKE+VG MI + P V+Y ++ G C
Sbjct: 328 ESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIG 387
Query: 353 LVEDVDWVLKKMVQQGFVP 371
++ ++K M + P
Sbjct: 388 ELDQARKMMKHMYKNDCKP 406
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 145/288 (50%), Gaps = 11/288 (3%)
Query: 89 PNEALYTLIINKLAQAKRFD-AIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
P+ ++ + +N L A R D A+E + M+R+ VE D + YN + A R+
Sbjct: 195 PDISICNMAVNVLVVAGRVDKALEFAERMRRVGVE-----PDVYTYNCLIKGLCGARRVV 249
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACCLNIL 204
A+E + M C P ++ V++ L K E++G+ G+ D N+L
Sbjct: 250 DAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVL 309
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GL ++G+ + A L E + + YS ++H C G + EA ++ M S+G
Sbjct: 310 IHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGC 369
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VT++ ++ G + G++++ K+++ M C PN+ ++ +L GL + EA E
Sbjct: 370 QPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWE 429
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQQGFVP 371
L+ + E +PS ++Y ++HG + KL E D V+ +M+Q+GF P
Sbjct: 430 LLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVV-QMLQKGFFP 476
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 136/277 (49%), Gaps = 3/277 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P++ Y +++ L + KR + + ++QR++ + F D YNV+ I+G G +A
Sbjct: 265 PDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGL-FPDQVTYNVL-IHGLAKHGHADEA 322
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E L + ++ +++ E + I G + D + ++ G
Sbjct: 323 LEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDG 382
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C G L+ A ++ K +C+PN T++ L++GLC+ G EA+ LL + E E
Sbjct: 383 FCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPS 442
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+++++ G R++GK++E ++ +M KG +P + +++ L ++ EAK+ +
Sbjct: 443 DITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFME 502
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+ + + + V++ +IHG Q +E ++ M
Sbjct: 503 QCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDM 539
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 141/293 (48%), Gaps = 4/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGRISKA 147
P++ Y ++I+ LA+ D + ++ ++ + RF D Y+ I + GR+++A
Sbjct: 301 PDQVTYNVLIHGLAKHGHAD---EALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEA 357
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E + +M S C P V T++ V++ + + + K + + LL G
Sbjct: 358 KEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNG 417
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G A+ +L++ ++ P+ TYS +MHG +G ++E+ ++ +M +G
Sbjct: 418 LCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPT 477
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TV N+LI L K K E +E+ + KGC N ++ V++G + A L+
Sbjct: 478 TVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMD 537
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M P V+Y ++ L + +++ +++KM+ +G +P +R ++
Sbjct: 538 DMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVI 590
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 102/209 (48%), Gaps = 4/209 (1%)
Query: 142 GRISKAIETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G+ S+A E L + W PS T+++V++ E + + G
Sbjct: 422 GKTSEAWE-LLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVE 480
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+N+L+ LC++ A +++ + C NV ++T++HG +G++E A L++ M
Sbjct: 481 INLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMY 540
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
D VT+ +++ L K+G+++E L+E+M +G P +Y+ V++ +K
Sbjct: 541 LSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLE 600
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLC 349
+ L+ +M+ + S +Y +++ LC
Sbjct: 601 DLLNLLEKMLARQEMKS--AYNQVVEKLC 627
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 148/315 (46%), Gaps = 14/315 (4%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+L + +RK +P+ ++++IN L + +F E++ + + + YN +
Sbjct: 305 LLREMFERK-MSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI--IPNTITYNSMID 361
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ R+ A + M + C P V TF+++++ AK + + ++ G+
Sbjct: 362 GFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVA 421
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ L+ G C+ GNL AA +L E PNV T +TL+ GLC G +++A +
Sbjct: 422 NTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMF 481
Query: 257 ERMESEGID-----------ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+ M+ +D D T+NILI GL +GK E +L E M +G P++ +
Sbjct: 482 KVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTIT 541
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y V+ GL + R EA ++ M + SP V++ LI+G C V D V +M
Sbjct: 542 YNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMG 601
Query: 366 QQGFVPRMGMWREIV 380
++G V +R ++
Sbjct: 602 RRGIVANAITYRTLI 616
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 167/371 (45%), Gaps = 55/371 (14%)
Query: 53 KDWLSPTEV-----LKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
+D L P ++ + + D +S +++L + + PN +Y+ II+ L + R
Sbjct: 205 EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQ 264
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
+++ ++ + + + F YN + +GR S+A L +M P V TF+
Sbjct: 265 TDAQNLFSEMQEKGIS--PNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFS 322
Query: 168 LVLNLLV-------SAKLYGEI--QGI---------------------------YTSAAK 191
+++N LV + +LY E+ +GI Y A K
Sbjct: 323 VLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATK 382
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G D +IL+ G C ++ +L E ++ N TY+TL+HG C+ GN+
Sbjct: 383 -GCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNA 441
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-----------GCY 300
A LL+ M S G+ + VT N L+ GL GK+++ +++ + M+
Sbjct: 442 ALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVE 501
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P+ +Y ++ GL+++ +F EA+EL M + P ++Y +I GLC Q +++ +
Sbjct: 502 PDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQM 561
Query: 361 LKKMVQQGFVP 371
M +GF P
Sbjct: 562 FDSMGSKGFSP 572
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 133/276 (48%), Gaps = 15/276 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K +P+ ++++I+ AKR D ++ + L ++ Y + I+G G
Sbjct: 382 KGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGL--VANTITYTTL-IHGFCQLGN 438
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC---- 199
++ A++ L +M S P+V T N +L+ L + + ++ K +++DA
Sbjct: 439 LNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFN 498
Query: 200 -------CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
NIL+ GL G A + +E P + P+ TY++++ GLC++ ++EA
Sbjct: 499 DVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEA 558
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ + M S+G D VTF LI+G K G+V +G+++ M +G N+ +Y+ +++G
Sbjct: 559 TQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHG 618
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
A ++ MI + P ++ + ++ GL
Sbjct: 619 FCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 27/257 (10%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC-------RFSDGFFYNVIKI 136
R+ N YT +I+ Q +A D++Q + +C DG N
Sbjct: 416 RRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNN---- 471
Query: 137 YGNMAGRISKAIETLFDM-----------PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
G++ A+E M P + P V+T+N+++ L++ + E + +
Sbjct: 472 -----GKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEEL 526
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
Y G+ D N ++ GLC+ L+ A + D + P+V T++TL++G C+
Sbjct: 527 YEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCK 586
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V + + M GI A+ +T+ LI G + G + + + + M G YP++ +
Sbjct: 587 VGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTIT 646
Query: 306 YQEVLYGLLDKKRFPEA 322
+ +L GL K+ A
Sbjct: 647 IRNMLTGLWSKEELKRA 663
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 109/230 (47%), Gaps = 5/230 (2%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+S+A+ + C P+V F ++N L E + + G++ +
Sbjct: 161 RVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 216
Query: 203 ILLKGLCENGNLEAAFYVLDEFPK-QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++ G+C+ G+ +A +L + + +PNV YS ++ GL + G +A L M+
Sbjct: 217 TIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQE 276
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI + T+N +I+G G+ E +LL M + P+ ++ ++ L+ + +F E
Sbjct: 277 KGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFE 336
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A+EL M+ + P+ ++Y +I G Q ++ + + M +G P
Sbjct: 337 AEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSP 386
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 5/174 (2%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
IL+K C L A + K P++ T+STL+HGLC + V EA ++
Sbjct: 114 FTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI- 172
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ + F L++GL ++G+V E + LL+RM G PN +Y ++ G+
Sbjct: 173 ---CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 229
Query: 321 EAKELVGRM-ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
A L+ +M R+ P+ V Y +I GL D + +M ++G P +
Sbjct: 230 SALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNL 283
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN++ G+ S+A E +MP P T+N V++ L E ++ S
Sbjct: 507 YNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMG 566
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G D L+ G C+ G + V E ++ N TY TL+HG C+ GN+
Sbjct: 567 SKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNIN 626
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
A + + M S G+ DT+T +++GL + +++ ++ L
Sbjct: 627 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L +ME I + +F ILI K+ + ++ G +P+ ++ +L+GL
Sbjct: 98 LHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLC 157
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ R EA IC+ P+ +++ L++GLC + V + +L +MV+ G P
Sbjct: 158 VEDRVSEALHFF-HQICK---PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQI 213
Query: 375 MWREIV 380
+ IV
Sbjct: 214 TYGTIV 219
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 6/275 (2%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS 156
+++ L +A+R + I + +RI + C+ + + ++K G+I KA T+ +M
Sbjct: 6 LLDLLERARRSEQIVVVFRRI-FSQDCKPNALSYCYLVKALCR-TGKIDKACSTIAEMAR 63
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
P V T+N+V++ L A+ + + E D N LL GLC+NG +
Sbjct: 64 EKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQ 119
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A + P+ TY+TL+ C+ E A+GLL+ M S ++ +I+
Sbjct: 120 ACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIIN 179
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
GL K KV++ +L E MK GC P+ +Y +++GL K+R EAK+L+ M+ P
Sbjct: 180 GLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQP 239
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+++ LI GLC +++ + + M +QG P
Sbjct: 240 DKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAP 274
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 119/265 (44%), Gaps = 6/265 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+D PN Y ++ L + + D + + EKL D F YNV+ A RI
Sbjct: 29 QDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKL--VPDVFTYNVVIDTLCKARRI 86
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S+AIE MP P V T+N +L L + ++ S G+ L
Sbjct: 87 SRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 142
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ C+ E A+ +L + C P V +Y ++++GLC+ V++A+ L E M+ G
Sbjct: 143 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 202
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VT+N LI GL + ++ E LL M G P+ ++ ++ GL R EA
Sbjct: 203 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFV 262
Query: 325 LVGRMICERMSPSFVSYKKLIHGLC 349
L M + +P V++ L+ LC
Sbjct: 263 LFQGMAKQGCAPDLVTHTVLVSKLC 287
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T N +L+LL A+ +I ++ + +A L+K LC G ++ A + E
Sbjct: 2 TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61
Query: 225 PKQNC-------------------------------EPNVRTYSTLMHGLCEKGNVEEAF 253
++ EP+V TY+TL+ GLC+ G V +A
Sbjct: 62 AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQAC 121
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L ME GI VT+ LI K + E LL+ M + C P SY ++ GL
Sbjct: 122 SLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGL 181
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ +A +L M P V+Y LIHGLC ++ + + +L MV+ GF P
Sbjct: 182 CKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQP 239
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 4/179 (2%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL L E V Q+C+PN +Y L+ LC G +++A + M
Sbjct: 4 NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
E + D T+N++I L K ++ ++ E M P+ +Y +L GL R +
Sbjct: 64 EKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQ 119
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A L G M ++PS V+Y LI C E +L+ M + P + + I+
Sbjct: 120 ACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSII 178
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 126/324 (38%), Gaps = 38/324 (11%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
T ++ +F + + +L + RK +P Y IIN L + ++ D + + +K
Sbjct: 140 TTLIDVFCKMCQFETAYGLLQLMASRK-CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMK 198
Query: 119 VEKLCRFSDGFFYNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
+ C+ D YN + I+G + R+ +A + L M P TF ++ L +
Sbjct: 199 LAG-CK-PDRVTYNTL-IHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTD 255
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP------------ 225
E ++ AK G D +L+ LC L A V+ +P
Sbjct: 256 RIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPI 315
Query: 226 ---------------------KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++ PNV TY+ GL + A+ RM +GI
Sbjct: 316 FRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGI 375
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ D V +N+L+ G K +++ K++ M G PN +Y ++ K + E
Sbjct: 376 EPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGE 435
Query: 325 LVGRMICERMSPSFVSYKKLIHGL 348
L+ M+ P ++ L+ GL
Sbjct: 436 LLHTMVSRGRQPDVATWSTLVAGL 459
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 4/229 (1%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
D I VL Q ++ P+ +T++++KL ++ + + ++ C +
Sbjct: 255 DRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRK---LRPALSVVRNYPACPEAVIL 311
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+ + + G G +A L M P+V T+ L K +
Sbjct: 312 YTPIFRELGRRRG-FDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRM 370
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ G+E D N+L+ G C+ L+ A ++ + PN+ TY+TL+ C KG V
Sbjct: 371 LEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKV 430
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
E LL M S G D T++ L++GL G+ + L +G
Sbjct: 431 EAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 138/292 (47%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +Y II+ + + K + D+ + + + D YN + + G++ A
Sbjct: 210 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGIS--PDVVTYNALISGFCIVGKMKDAT 267
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M N P+V TFN++++ + E + + K G++ D N L+
Sbjct: 268 DLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C + A ++ + ++ PN+ +YS ++HG C+ V+EA L + M I D
Sbjct: 328 CLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDV 387
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N LI GL K GK+ +KL++ M +G + +Y +L L + +A L+ +
Sbjct: 388 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 447
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M E + P +Y L+ GLC +ED V + ++ +G++ + ++ ++
Sbjct: 448 MKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMI 499
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
N PS+ F +L LV + Y + ++ G+ D L+IL+ + G +
Sbjct: 67 NPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLS 126
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
F VL + K EPNV T +TL+ GLC KG + +A +++ + G + V++ LI+G
Sbjct: 127 FSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLING 186
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L K G+ ++LL R+ GK PN Y ++ + K EA +L M+ + +SP
Sbjct: 187 LCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPD 246
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+Y LI G C ++D + KM+ + P + + +V
Sbjct: 247 VVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 27/308 (8%)
Query: 54 DWLSPTEVLKIFSNL-RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIED 112
D + + ++ FS L ++P+S SVL + K Y PN T +I L
Sbjct: 106 DLVILSILINCFSQLGQNPLS-FSVLAKILKM-GYEPNVITLTTLIKGLCL--------- 154
Query: 113 IMQRIKVEKLCRFSD-----GFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWP 161
+ ++ + +F D GF N + YG + G+ S A++ L + P
Sbjct: 155 ---KGQIHQALQFHDKVVALGFHLNKVS-YGTLINGLCKVGQTSAALQLLRRVDGKLVQP 210
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
+V +N +++ + KL E +Y+ G+ D N L+ G C G ++ A +
Sbjct: 211 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLF 270
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
++ +N PNV T++ L+ G C++ ++EA +L M +GI D T+N L+
Sbjct: 271 NKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLV 330
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
+V + + + +G PN SY +++G K+ EA L M C + P V+Y
Sbjct: 331 KEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTY 390
Query: 342 KKLIHGLC 349
LI GLC
Sbjct: 391 NSLIDGLC 398
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 143/309 (46%), Gaps = 4/309 (1%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+++S N+ +K+ P+ + I+ L ++ + + + ++++ + SD +
Sbjct: 54 NLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGIT--SDLVILS 111
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAK 191
++ + G+ + L + P+V T L+ L + +++ +Q +
Sbjct: 112 ILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQ-FHDKVVA 170
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
LG ++ L+ GLC+ G AA +L + +PNV Y+T++ +C+ V E
Sbjct: 171 LGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNE 230
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
AF L M S+GI D VT+N LISG GK+++ L +M + PN ++ ++
Sbjct: 231 AFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVD 290
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G ++R EAK ++ M+ + + P +Y L+ C K V + + Q+G P
Sbjct: 291 GFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNP 350
Query: 372 RMGMWREIV 380
+ + ++
Sbjct: 351 NIHSYSIMI 359
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 136/285 (47%), Gaps = 2/285 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
++ NPN + ++++ + +R ++++ + + + D F YN + + +
Sbjct: 276 ENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIK--PDVFTYNSLMDRYCLVKEV 333
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+KA + P++ +++++++ K E ++ + D N L
Sbjct: 334 NKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSL 393
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+ G + A ++DE + + TY++++ LC+ V++A LL +M+ EGI
Sbjct: 394 IDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 453
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D T+ L+ GL K G++E+ + E + KG + Y ++ G F E+ +
Sbjct: 454 QPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLD 513
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L+ +M P+ V+Y+ +I L ++ + + +L++M+ +G
Sbjct: 514 LLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 3/224 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+ N S+R NPN Y+++I+ + K+ D ++ + + + D YN +
Sbjct: 339 IFNTISQR-GVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNI--IPDVVTYNSLID 395
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G+IS A++ + +M T+N +L+ L + + T G++
Sbjct: 396 GLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP 455
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D C L+ GLC+NG LE A V ++ + +V Y+ ++ G C G +E+ LL
Sbjct: 456 DICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLL 515
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
+ME G + VT+ I+I L + + ++ KLL M +G +
Sbjct: 516 SKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559
>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
gi|223945505|gb|ACN26836.1| unknown [Zea mays]
Length = 462
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 40/320 (12%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RKD PN+A ++ +IN L Q + + ++++++ +K D YN I + R
Sbjct: 137 RKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQM--QKYGYMPDVVSYNTIISCFSDQAR 194
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
A++ L M C P +FN VL L AK + + + K I+ NI
Sbjct: 195 ADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNI 251
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME--- 260
L+ LC+NG ++ A V + PK C P++ TYS+L++G E+G E AF L M
Sbjct: 252 LIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA 311
Query: 261 -----------------------------SEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+E + VTFNILIS L ++G V + +
Sbjct: 312 DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVY 371
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E+M G P+ +Y ++ G ++ R +A + + M CE P +SY ++ GLC
Sbjct: 372 EQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE---PDTISYNSILKGLCRA 428
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
+ +D + ++ +M+++ P
Sbjct: 429 ERWKDAEKLVTEMLRKNCTP 448
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 146/293 (49%), Gaps = 8/293 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L AK+++ E++M+ + + C ++ F I+ + G + +A+
Sbjct: 5 PDTYTYNTVLKGLCCAKQWEQAEELMREM-IRNSCHPNEVTFATQIRAFCQ-NGLLDRAV 62
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L MP Y C P V ++ ++N +G + + + C N LKGL
Sbjct: 63 ELLEQMPKYGCTPDVIIYSTLVNGFSE---HGRVDEALKLLNTMLCRPNTVCYNAALKGL 119
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G E ++ E +++C PN T+STL++ LC+ VE A +LE+M+ G D
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V++N +IS Q + ++ +KLL+ M C P++ S+ VL L KR+ +A ELV +
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAK 236
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
M+ + + +++ LI LC V+D V + M + +P + + ++
Sbjct: 237 MLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLIN 289
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 134/255 (52%), Gaps = 10/255 (3%)
Query: 89 PNEALYTLIINKLAQAKR-FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ + ++ L +AKR +DA+E + + +K K CR ++ F N++ G++ A
Sbjct: 209 PDTISFNAVLKCLCKAKRWYDAVELVAKMLK--KDCRINEMTF-NILIDSLCQNGQVKDA 265
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
IE MP Y C P + T++ ++N L ++ S + D N LKG
Sbjct: 266 IEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRS---MPCRADIFSYNATLKG 322
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC + A ++ + ++C PN T++ L+ LC+KG V A + E+M GI D
Sbjct: 323 LCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPD 382
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+N LI+G +QG++++ +K L M C P++ SY +L GL +R+ +A++LV
Sbjct: 383 IFTYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVT 439
Query: 328 RMICERMSPSFVSYK 342
M+ + +P+ V++K
Sbjct: 440 EMLRKNCTPNEVTFK 454
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 99/183 (54%), Gaps = 3/183 (1%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +LKGLC E A ++ E + +C PN T++T + C+ G ++ A LLE+M
Sbjct: 11 NTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPK 70
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D + ++ L++G + G+V+E +KLL M C PN+ Y L GL R+ E
Sbjct: 71 YGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEE 127
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
EL+ M+ + P+ ++ LI+ LC +LVE VL++M + G++P + + I+
Sbjct: 128 VGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIIS 187
Query: 382 CVT 384
C +
Sbjct: 188 CFS 190
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 8/293 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y + L A R++ + +++ + V K C +D F +I + A+
Sbjct: 107 PNTVCYNAALKGLCIAGRWEEVGELIAEM-VRKDCPPNDATFSTLINSLCQ-NRLVEYAV 164
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M Y P V ++N +++ + + S + + D N +LK L
Sbjct: 165 EVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKS---MLCKPDTISFNAVLKCL 221
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ A ++ + K++C N T++ L+ LC+ G V++A + E M D
Sbjct: 222 CKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDI 281
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ LI+G +QG E L M C + SY L GL R+ +A EL+
Sbjct: 282 VTYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIAD 338
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
M+ E P+ V++ LI LC + LV V ++M + G P + + ++
Sbjct: 339 MVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALIN 391
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 149/336 (44%), Gaps = 12/336 (3%)
Query: 40 HQDSDHHAYKLNHKDWLSPTE-----VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALY 94
H D+ ++ H+D + PT + L +++L + R P+ LY
Sbjct: 155 HADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMA-RHGCVPDAVLY 213
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM 154
+I+ L ++ + + C F +V++ + GR+ +A + M
Sbjct: 214 QTVIHALCDQGGVTEAATLLNEMLLMG-CAADVNTFDDVVRGMCGL-GRVREAARLVDRM 271
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
+ C P V T+ +L L + E + + +L V + N ++ G G L
Sbjct: 272 MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVL----FNTVIGGCLAEGKL 327
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
A + + + C+P+ TYS LMHGLC+ G + A LL ME +G + VT+ I+
Sbjct: 328 AEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIV 387
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
+ K G ++ LLE M KG NS Y ++Y L R EA L+ M +
Sbjct: 388 LHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGC 447
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+P SY +I+ LCN + +E+ + + + ++++G V
Sbjct: 448 NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 483
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 147/291 (50%), Gaps = 3/291 (1%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
S + +L + K K + PN YT++++ + +D +++ + + L S G+
Sbjct: 364 SAVRLLREMEK-KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 422
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ + + GR+ +A+ + +M S C P + ++N ++ L + + E + ++ + +
Sbjct: 423 IYALCKD--GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GV + N ++ L +G + A + E C +V +Y+ L+ +C+ GNV+ +
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LLE M +GI + V++NILIS L K+ +V + ++L ++M +G P+ +Y ++ G
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
L A L+ ++ E + P ++Y LI C +L++D +L +
Sbjct: 601 LCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 144/286 (50%), Gaps = 3/286 (1%)
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM 154
T+I LA+ K +A E + K C+ D Y+++ GRIS A+ L +M
Sbjct: 316 TVIGGCLAEGKLAEATE--LYETMGLKGCQ-PDAHTYSILMHGLCKLGRISSAVRLLREM 372
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
P+V T+ +VL+ ++ + + + + G+ +++ N ++ LC++G +
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A ++ E Q C P++ +Y+T+++ LC +EEA + E + EG+ A+ +T+N +
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I L + G+ ++ ++L + M GC + SY ++ + + L+ M + +
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P+ VSY LI LC ++ V D + K+M+ QG P + + ++
Sbjct: 553 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLI 598
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 138/298 (46%), Gaps = 7/298 (2%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAK-RFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ +L+Q +R P+ Y ++++ LA+A DA+ + + +++ + F +
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTT--FTFG 179
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
V GR ++A+ L M + C P + V++ L E + +
Sbjct: 180 VAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM 239
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D + +++G+C G + A ++D + C P V TY L+ GLC +EA
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA 299
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+L R+ + + V FN +I G +GK+ E +L E M KGC P++ +Y +++G
Sbjct: 300 RAMLGRVP----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHG 355
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
L R A L+ M + +P+ V+Y ++H C + +D +L++M +G
Sbjct: 356 LCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLT 413
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 33/260 (12%)
Query: 145 SKAIETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA-KLGVEIDACCLN 202
+A+ L +P + PS +++N+VL++L A + + +Y + V
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFG 179
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+ + LC G A +L + C P+ Y T++H LC++G V EA LL M
Sbjct: 180 VAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM 239
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G AD TF+ ++ G+ G+V E +L++RM KGC P +Y +L GL ++ EA
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA 299
Query: 323 KELVGRM--------------------------ICERMS-----PSFVSYKKLIHGLCNQ 351
+ ++GR+ + E M P +Y L+HGLC
Sbjct: 300 RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKL 359
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
+ +L++M ++GF P
Sbjct: 360 GRISSAVRLLREMEKKGFAP 379
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 2/222 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q + + NP+ Y II L ++ + E + + + E + ++G YN I
Sbjct: 438 LIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV--VANGITYNTIIHA 495
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
GR A+ +M + C V ++N ++ + + A+ G++ +
Sbjct: 496 LLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPN 555
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
NIL+ LC+ + A + + Q P++ TY+TL++GLC+ G + A LLE
Sbjct: 556 NVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLE 615
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
++ +E + D +T+NILIS K +++ LL R C
Sbjct: 616 KLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 657
>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Glycine max]
Length = 618
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 143/300 (47%), Gaps = 7/300 (2%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
S ++ +++ Y +I+KL +RFD ++ ++ + D F +I+ G
Sbjct: 60 STVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGR-- 117
Query: 142 GRISKAIETLFDMP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
R+++ + + D+ ++ PS+K FN +L++LV + + S GVE D
Sbjct: 118 ARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVKEDIDMAREFYRKSMMASGVEGDDYT 177
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
IL+KGLC + F +L + PN Y+TL+H LC G V A L+ ME
Sbjct: 178 FGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEME 237
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
D + VTFNILISG K+G + + LLE+ G P+ S +VL L + R
Sbjct: 238 ----DPNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTM 293
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA E++ R+ V+Y LI G C V+ LK+M +G +P + + ++
Sbjct: 294 EAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLI 353
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 143/305 (46%), Gaps = 10/305 (3%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q K + PN +Y +++ L + + ++M ++ +D F +I Y
Sbjct: 197 LLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMEDP-----NDVTFNILISGY 251
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
G +A+ L S P V + VL +L +A E + +G +D
Sbjct: 252 CK-EGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLD 310
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+KG C G ++ + L + + C PNV TY+ L+ G E G ++ A L
Sbjct: 311 VVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFN 370
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK--GKGCYPNSASYQEVLYGLLD 315
M+++GI + VTF+ LI GL + ++E+G +LE M+ +G + + Y ++YGLL
Sbjct: 371 DMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLK 430
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
K F E+ E + +M + P V +I C + +ED V +M+ +G +P + +
Sbjct: 431 KNGFDESAEFLTKM--GNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILV 488
Query: 376 WREIV 380
+ +V
Sbjct: 489 YNCLV 493
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 162/390 (41%), Gaps = 50/390 (12%)
Query: 8 ARNHRQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSN 67
++ H +I SAS +A P+ H S + A L HK
Sbjct: 35 SQEHVSQLILDQKSASEALEYFRWASTVPNFVHSQSTYRA--LIHK-----------LCT 81
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQA----------------------K 105
R +V +L++ P + ++ II L +A K
Sbjct: 82 FRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLK 141
Query: 106 RFDAIEDIMQRIKVEKLCRF-----------SDGFFYNVIKIYGNMAGRISKAIETLFDM 154
F++I D++ + ++ F D + + ++ + RI + + L +
Sbjct: 142 IFNSILDVLVKEDIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLI 201
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
S P+ +N +L+ L G + + + + NIL+ G C+ GN
Sbjct: 202 KSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEME----DPNDVTFNILISGYCKEGNS 257
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
A +L++ P+V + + ++ LC G EA +LER+ES G D V +N L
Sbjct: 258 VQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTL 317
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I G GKV+ G+ L++M+ KGC PN +Y ++ G + A +L M + +
Sbjct: 318 IKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGI 377
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+FV++ LI GLC+++ +ED +L+ M
Sbjct: 378 KWNFVTFDTLIRGLCSEERIEDGFSILELM 407
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 147/339 (43%), Gaps = 37/339 (10%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL + S + P+ T ++ L A R ++++R VE + D YN +
Sbjct: 262 VLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLER--VESMGGLLDVVAYNTLIK 319
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
AG++ + L M + C P+V T+N++++ + + ++ G++
Sbjct: 320 GFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKW 379
Query: 197 DACCLNILLKGLCENGNLEAAFYVLD--EFPKQNCEPNVRTYSTLMHGL----------- 243
+ + L++GLC +E F +L+ E K+ ++ Y+++++GL
Sbjct: 380 NFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAE 439
Query: 244 ----------------------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
C+KG +E+A + ++M EG + +N L+ G KQ
Sbjct: 440 FLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQ 499
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G V E ++L+ M C+P +++ V+ G + + A +LV + P+ +Y
Sbjct: 500 GNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETY 559
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LI LC ++ V +MV +G +P + +W ++
Sbjct: 560 SPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLL 598
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 121/271 (44%), Gaps = 16/271 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK-- 146
PN Y ++I+ +++ D D+ +K +DG +N + + G S+
Sbjct: 344 PNVDTYNVLISGFSESGMLDLALDLFNDMK-------TDGIKWNFVTFDTLIRGLCSEER 396
Query: 147 -----AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+I L + + +N ++ L+ + E T L A
Sbjct: 397 IEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPR--AVDR 454
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++++ C+ G +E A V D+ + P++ Y+ L+HG ++GNV EA L+ M +
Sbjct: 455 SLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIA 514
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
TFN +I+G +QGKVE +KL+E + +GC PN+ +Y ++ L +
Sbjct: 515 NNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQK 574
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
A ++ +M+ + + P + L+ L ++
Sbjct: 575 AMQVFMQMVDKGILPDLFIWNSLLLSLSQER 605
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G + GN+ A +++E NC P T++ ++ G C +G VE A L+E + +
Sbjct: 490 NCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITA 549
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G +T T++ LI L + G +++ M++ +M KG P+ + +L L ++ F
Sbjct: 550 RGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSLSQERHF 607
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 35/147 (23%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A+E + +M + NC+P TFN V+
Sbjct: 500 GNVREAVELMNEMIANNCFPIPSTFNAVIT------------------------------ 529
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
G C G +E+A ++++ + C PN TYS L+ LC G++++A + +M
Sbjct: 530 -----GFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVD 584
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGM 288
+GI D +N L+ L ++ + M
Sbjct: 585 KGILPDLFIWNSLLLSLSQERHFSKNM 611
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 144/301 (47%), Gaps = 14/301 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG- 142
+ + NE + ++N L AKR D DI+ R ++ F G NV+ + G
Sbjct: 118 KTGWRVNEVVINQLLNGLCDAKRVDEAMDILLR----RMPEF--GCMPNVVSCNTLLKGL 171
Query: 143 ----RISKAIETLFDMP---SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
R+ +A+E L M NC P+V T+N +++ L A+ +G+ GV+
Sbjct: 172 CNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVK 231
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+D + ++ GLC+ ++ A VL + +P+V TY+T++ GLC+ V+ A G+
Sbjct: 232 LDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGV 291
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
L+ M +G+ D VT+N +I GL K V+ +L+ M K P+ +Y +++G L
Sbjct: 292 LQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLS 351
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
+ E + M + P V+Y L+ LC + + M+++G P + +
Sbjct: 352 TGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTI 411
Query: 376 W 376
+
Sbjct: 412 Y 412
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 134/284 (47%), Gaps = 2/284 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN Y II+ L +A+ D E ++Q + ++K + D Y+ I A + +A
Sbjct: 196 TPNVVTYNTIIDGLCKAQAVDRAEGVLQHM-IDKGVKL-DVVTYSTIIDGLCKAQAVDRA 253
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L M P V T+N +++ L A+ +G+ GV+ D N ++ G
Sbjct: 254 EGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDG 313
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ ++ A VL ++ +P+++TY+ L+HG G +E LE M + G+D D
Sbjct: 314 LCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPD 373
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+++L+ L K GK E K+ M KG PN Y +L+G + + +L+
Sbjct: 374 VVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLD 433
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ +SP+ + ++ + ++++ + +M Q G P
Sbjct: 434 LMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSP 477
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 2/286 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN ++ +++ A+ D I R+ L D Y ++ GR+ A
Sbjct: 441 SPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLS--PDVVTYGILIDALCKLGRVDDA 498
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ M + P+ FN ++ L + + + + ++ GV + N ++
Sbjct: 499 VLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCN 558
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC G + A ++D + PNV +Y+TL+ G C G +EA LL+ M S G+ D
Sbjct: 559 LCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPD 618
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++++ L+ G K G+++ L M KG P + +Y +L GL +RF EAKEL
Sbjct: 619 LISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYL 678
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
MI +Y +++GLC V++ + + + + P +
Sbjct: 679 NMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNI 724
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 143/303 (47%), Gaps = 4/303 (1%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
Q+ K P+ Y II+ L +A+ D + ++Q + ++K + D YN + I+G
Sbjct: 293 QHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM-IDKDVK-PDIQTYNCL-IHGY 349
Query: 140 MA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
++ G + + L +M + P V T++L+L+ L E + I+ + G++ +
Sbjct: 350 LSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNV 409
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
ILL G G + +LD PN ++ ++ +K ++EA + R
Sbjct: 410 TIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSR 469
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G+ D VT+ ILI L K G+V++ + +M G PNS + ++YGL R
Sbjct: 470 MSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDR 529
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
+ +A+EL M + + P+ V + ++ LCN+ V ++ M + G P + +
Sbjct: 530 WEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNT 589
Query: 379 IVG 381
++G
Sbjct: 590 LIG 592
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 124/287 (43%), Gaps = 2/287 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ II+ L +A+ D E ++Q + ++K + D YN I A + +A L
Sbjct: 237 YSTIIDGLCKAQAVDRAEGVLQHM-IDKGVK-PDVVTYNTIIDGLCKAQAVDRAEGVLQH 294
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P V T+N +++ L A+ G+ V+ D N L+ G G
Sbjct: 295 MIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGE 354
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ L+E + +P+V TYS L+ LC+ G EA + M +GI + + I
Sbjct: 355 WKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGI 414
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ G +G + + LL+ M G PN+ + VL K EA + RM
Sbjct: 415 LLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHG 474
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+SP V+Y LI LC V+D +M+ G P ++ +V
Sbjct: 475 LSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLV 521
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 4/194 (2%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVL-DEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
K G ++ +N LL GLC+ ++ A +L P+ C PNV + +TL+ GLC + V
Sbjct: 118 KTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRV 177
Query: 250 EEAFGLLERMESEG---IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
EEA LL M +G + VT+N +I GL K V+ +L+ M KG + +Y
Sbjct: 178 EEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTY 237
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL + A+ ++ MI + + P V+Y +I GLC + V+ + VL+ M+
Sbjct: 238 STIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMID 297
Query: 367 QGFVPRMGMWREIV 380
+G P + + I+
Sbjct: 298 KGVKPDVVTYNTII 311
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 12/292 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV----IKIYGNM 140
+ +P+ Y+L+++ L + + I C G NV I ++G
Sbjct: 368 RGLDPDVVTYSLLLDYLCKNGKCTEARKIFY-------CMIRKGIKPNVTIYGILLHGYA 420
Query: 141 A-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
A G I+ + L M + P+ FN+VL + E I++ ++ G+ D
Sbjct: 421 ARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVV 480
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
IL+ LC+ G ++ A ++ PN +++L++GLC E+A L M
Sbjct: 481 TYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEM 540
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+G+ + V FN ++ L +G+V +L++ M+ G PN SY ++ G R
Sbjct: 541 WDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRT 600
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA +L+ M+ + P +SY L+ G C +++ + ++M+++G P
Sbjct: 601 DEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTP 652
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 11/241 (4%)
Query: 151 LFDMPSYNCWP-SVKTFNLVLNLLVSAK------LYGEIQGIYTSAAKLGVEIDACCLNI 203
LFD + P SV+ FN +LN++ A+ L + A V D C +I
Sbjct: 36 LFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSI 95
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG-LLERMESE 262
L C G +E F K N + L++GLC+ V+EA LL RM
Sbjct: 96 LTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEF 155
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMK---GKGCYPNSASYQEVLYGLLDKKRF 319
G + V+ N L+ GL + +VEE ++LL M G C PN +Y ++ GL +
Sbjct: 156 GCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAV 215
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A+ ++ MI + + V+Y +I GLC + V+ + VL+ M+ +G P + + I
Sbjct: 216 DRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTI 275
Query: 380 V 380
+
Sbjct: 276 I 276
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 128/293 (43%), Gaps = 2/293 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN ++ ++ L R++ E++ + + + + F+N I G++ A
Sbjct: 511 TPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGV--RPNVVFFNTIMCNLCNEGQVMVA 568
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ M P+V ++N ++ A E + +G++ D + LL+G
Sbjct: 569 QRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRG 628
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G ++ A+ + E ++ P TYST++ GL EA L M G D
Sbjct: 629 YCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWD 688
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+NI+++GL K V+E K+ + + K PN ++ ++ L R +A +L
Sbjct: 689 IYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFA 748
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P+ V+Y ++ + + L+++ D + M + G P M I+
Sbjct: 749 SIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAII 801
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 8/250 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
+R PN Y +I A R D + D+M + ++ D Y+ +
Sbjct: 576 ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLK-----PDLISYDTLLRGYC 630
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
GRI A +M P T++ +L L + + E + +Y + K G + D
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIY 690
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NI+L GLC+ ++ AF + ++ PN+ T++ ++ L + G ++A L +
Sbjct: 691 TYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASI 750
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S G+ + VT+ I++ + ++G ++E L M+ GC P+S ++ LL +
Sbjct: 751 PSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEI 810
Query: 320 PEAKELVGRM 329
A + ++
Sbjct: 811 MRAGAYLSKI 820
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 90/236 (38%), Gaps = 38/236 (16%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK P Y+ I+ L +RF +++ + + K + D + YN+I
Sbjct: 647 RKGVTPGAVTYSTILQGLFHTRRFSEAKELY--LNMIKSGQQWDIYTYNIILNGLCKTNC 704
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A + + S + P++ TF ++ +++
Sbjct: 705 VDEAFKIFQSLCSKDLRPNIITFTIM-------------------------------IDV 733
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L KG G + A + P PNV TY +M + ++G ++E L ME G
Sbjct: 734 LFKG----GRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG 789
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
D+V N +I L +G++ L ++ + AS +L L ++ +
Sbjct: 790 CTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMN-FSLEASTTSLLISLFSREEY 844
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 150/350 (42%), Gaps = 48/350 (13%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK-------------- 118
S +S+L KR Y P+ A ++++IN+L +A + ++ +Q +
Sbjct: 392 SALSLLETMIKR-GYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYN 450
Query: 119 --VEKLCRFSDGFFYNVIKIYGNMA-------------------------GRISKAIETL 151
+ LC+ + I+ M GR K + +
Sbjct: 451 SLLNSLCKAKK--VHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
D+ NC P+V T+N LN L+ + QG+Y G D + L+ G
Sbjct: 509 IDL---NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLA 565
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
+ A + + + C PN TY+ L+HGLC++ +EA L +M G D D VT+
Sbjct: 566 RKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTY 625
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
L+ G GK+E+ +++ + M KG P+ +Y +L G + EAK+L M+
Sbjct: 626 TTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVS 685
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ-QGFVPRMGMWREIV 380
+ P VS+ +I GL K ++D V ++M Q G P + + ++
Sbjct: 686 RQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 735
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 120/231 (51%), Gaps = 1/231 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GRI+ A +M + C P V T++ +++ A+ + + ++ + G +A
Sbjct: 531 GRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTY 590
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL GLC+ + A + + ++ C+P+ TY+TL++G C G +E+A + + M S
Sbjct: 591 NCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVS 650
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G D D V +N L+ G + GK E +L + M + C P++ S+ ++ GL KR +
Sbjct: 651 KGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDD 710
Query: 322 AKELVGRMICER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A E+ RM + SP V+Y LI GLC ++ + + V K++ + P
Sbjct: 711 AVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 761
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 129/272 (47%), Gaps = 7/272 (2%)
Query: 81 YSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG 138
Y + D N PN Y +N L + R + + + + V C D Y+ + I+G
Sbjct: 505 YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM-VAAGCS-PDVITYSTL-IHG 561
Query: 139 -NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
++A + +A E M S C P+ T+N +L+ L E ++ + G + D
Sbjct: 562 FSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPD 621
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
LL G C G +E A V DE + +P+V Y+ L+ G G EA L +
Sbjct: 622 RVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQ 681
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGLLDK 316
M S DTV+ NI+I GL K ++++ +++ ERM + GC P+ +Y +++GL +
Sbjct: 682 VMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGE 741
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+R EA ++ + ++SP ++ L+ +
Sbjct: 742 QRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++L++ L E+G ++ A E +N +P+ T +++ LC+ G V+ A LLE M
Sbjct: 343 DMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIK 402
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK--GCYPNSASYQEVLYGLLDKKRF 319
G D T ++LI+ L K K++E + L+ M K + SY +L L K+
Sbjct: 403 RGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKV 462
Query: 320 PEAKELVGRMICER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+A + M+ ER P VSY LI G C + + + K+M+ VP + +
Sbjct: 463 HQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTY 520
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKA 147
PN Y +++ L + + D ++ +++ VE+ C D Y + +YG G+I +A
Sbjct: 585 PNAVTYNCLLHGLCKESKPDEAHELFRKM-VERGCD-PDRVTYTTL-LYGFCNVGKIEQA 641
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E +M S P V +N +L A GE + ++ + D NI++ G
Sbjct: 642 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDG 701
Query: 208 LCENGNLEAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
L + L+ A V + + + C P++ TY++L+ GLC + + EA + + ++ +
Sbjct: 702 LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 761
Query: 267 DTVTFNILISGLR 279
D FN+L+ ++
Sbjct: 762 DPHAFNVLLEAIK 774
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/312 (19%), Positives = 128/312 (41%), Gaps = 5/312 (1%)
Query: 64 IFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC 123
+ +LRD ++ ++ + +++ + Y +++KL + + + +++ + +
Sbjct: 103 VIKHLRDGGEALTFF-RWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGV- 160
Query: 124 RFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
+GF Y V+ +A+ +M PS + V L + GE
Sbjct: 161 -VPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFS 219
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
++ + V ++ LL A + K C+P+ YS ++
Sbjct: 220 RVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAH 279
Query: 244 CEKGNVEEAFGLLERMESEG-IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
C+ N++EAF L M E + V + +SGL K GK+E+ + M+ + +
Sbjct: 280 CKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ-ESLSSS 338
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
Y ++ L++ R +A+E + + PS + +I LC V+ +L+
Sbjct: 339 QPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLE 398
Query: 363 KMVQQGFVPRMG 374
M+++G+ P M
Sbjct: 399 TMIKRGYCPDMA 410
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 39/242 (16%)
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
L++N ++ K E ++ + K G + DA + ++ C+ NL+ AF + E +
Sbjct: 240 LLVNFVIQDKAI-EASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVE 298
Query: 228 NCEP-NVRTYSTLMHGLCEKGNVEEAF---------------------------GLLERM 259
+ P N ++ + GLC+ G +E+AF G +++
Sbjct: 299 SKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKA 358
Query: 260 E-------SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
E I + T + +I L K G+V+ + LLE M +G P+ A++ ++
Sbjct: 359 EEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINE 418
Query: 313 LLDKKRFPEAKELVGRM--ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV-QQGF 369
L + EA+E + M S S SY L++ LC K V + MV ++ F
Sbjct: 419 LCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSF 478
Query: 370 VP 371
VP
Sbjct: 479 VP 480
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 73/154 (47%)
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+N + +V TY+ L+ L ++++A + E+M ++G+ + T+ +L+ + +E
Sbjct: 123 RNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDE 182
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
++ M KG P+S YQ+V L + E + GR + +R++ + K L+
Sbjct: 183 AVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLV 242
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Q + + + MV+ G P ++ +V
Sbjct: 243 NFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMV 276
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 162/376 (43%), Gaps = 73/376 (19%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++VL++ R+ P +Y +I+ + F + +++ + C G V+
Sbjct: 142 LAVLDEM-PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG-CALDVGNCNLVL 199
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+ G + +A+ L D+PS+ C P V ++N VL L AK +G +Q + ++
Sbjct: 200 NAICDQ-GSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMAC 258
Query: 195 EIDACCLNILLK-----------------------------------GLCENGNLEAAFY 219
+ N L+ G+C+ G+LE A
Sbjct: 259 PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHE 318
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGL-----------------------------------C 244
+L+ P +PNV Y+TL+ GL C
Sbjct: 319 ILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFC 378
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ G V+ LLE+M G D +T+ +I+G K+G ++E + LL+ M GC PN+
Sbjct: 379 QNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTI 438
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
SY VL GL +R+ +A++L+ +MI + + +++ LI+ LC + LVE +LK+M
Sbjct: 439 SYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 498
Query: 365 VQQGFVPRMGMWREIV 380
+ G P + + ++
Sbjct: 499 LVNGCSPDLISYSTVI 514
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 151/326 (46%), Gaps = 37/326 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLCRFSDGFFYNVI 134
P+ Y ++ L AKR+ ++++M+ + + LCR +G F V
Sbjct: 225 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCR--NGLFERVH 282
Query: 135 KIYGNMA---------------------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
++ M G + A E L MPSY P+V +N +L L
Sbjct: 283 EVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGL 342
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
SA+ + E + + +D NIL+ C+NG ++ +L++ ++ C P+V
Sbjct: 343 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDV 402
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY+T+++G C++G ++EA LL+ M + G +T+++ I++ GL + + L+ +
Sbjct: 403 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 462
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M +GC N ++ ++ L K +A EL+ +M+ SP +SY +I GL
Sbjct: 463 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREI 379
++ +L MV +G P ++ I
Sbjct: 523 TDEALELLNVMVNKGMSPNTIIYSSI 548
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 132/283 (46%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++ L A+R++ E+++ + +K C D F N++ + G + + I
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEM-FDKDCPLDDVTF-NILVDFFCQNGLVDRVI 387
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M C P V T+ V+N L E + S G + + I+LKGL
Sbjct: 388 ELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 447
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C A ++ + +Q C N T++TL++ LC+KG VE+A LL++M G D
Sbjct: 448 CSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 507
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++++ +I GL K GK +E ++LL M KG PN+ Y + L + R + ++
Sbjct: 508 ISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDN 567
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + V Y +I LC + E L MV G VP
Sbjct: 568 IQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 610
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 99/201 (49%)
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
G+++ AA + V +A +++ LC G + A VLDE P++ C P Y +
Sbjct: 104 GQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVI 163
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ C G A +LE + + G D N++++ + QG V+E + LL + GC
Sbjct: 164 LEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGC 223
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P+ SY VL GL KR+ +EL+ M+ P+ V++ LI LC L E V
Sbjct: 224 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHE 283
Query: 360 VLKKMVQQGFVPRMGMWREIV 380
VL +MV+ G P + M+ I+
Sbjct: 284 VLAQMVEHGCTPDIRMYATII 304
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GRI+ A+ L +MP C P ++++L + + G +D
Sbjct: 136 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNC 195
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK---GNVEEAFGLLER 258
N++L +C+ G+++ A ++L + P CEP+V +Y+ ++ GLC G V+E L+E
Sbjct: 196 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEE 252
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M + VTFN LIS L + G E ++L +M GC P+ Y ++ G+ +
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 312
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A E++ RM + P+ V Y L+ GLC+ + E+ + +L +M
Sbjct: 313 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 142/284 (50%), Gaps = 2/284 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD ++ + ++++ Q D + ++++++ +E+ C D Y + G I
Sbjct: 361 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LERGC-MPDVITYTTVINGFCKEGLI 418
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ L M + C P+ ++ +VL L SA+ + + + + + + G ++ N L
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ LC+ G +E A +L + C P++ +YST++ GL + G +EA LL M ++G+
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+T+ ++ + S L ++G++ + +++ + ++ ++ Y V+ L + A E
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ M+ P+ +Y LI GL ++ V++ +L ++ +G
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 144/304 (47%), Gaps = 10/304 (3%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R P + +I+ + K + + ++Q + + +D YN + AGR
Sbjct: 145 RAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGV--KADVVTYNTLMDGLCKAGR 202
Query: 144 ISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ +A + L M + C P V ++ V L S K+ Q + + + N
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQ-VLEQMRDSDHDPNVVTYN 261
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+L GLC++G ++ A ++++ + C NV YST++ GLC+ G +EA ++E M
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D VT++ L++GL K GK+EE ++ + M +GC PN+ +Y +++GL R E
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAE 381
Query: 322 AKELVGRM-----ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
A+ +V M + PS +Y LI GLC ++D ++M QG P +
Sbjct: 382 AERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSY 441
Query: 377 REIV 380
IV
Sbjct: 442 STIV 445
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 139/289 (48%), Gaps = 14/289 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG- 142
R PN + ++N ++ R E +++ + G NV+ G + G
Sbjct: 3 RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAAR-------GIQPNVVSYNGLLEGL 55
Query: 143 ----RISKAIETLFDMPSYN--CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
R +A E + DM S P + T++ +L+ A E + + G+
Sbjct: 56 CKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRP 115
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
DA ++ LC++ L A +L+E + C P + T++TL+ G C + N+E A LL
Sbjct: 116 DALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLL 175
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ M + G+ AD VT+N L+ GL K G+++E +LLERMK GC P+ +Y +YGL
Sbjct: 176 QTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS 235
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+ A +++ +M P+ V+Y ++ GLC ++ ++++M
Sbjct: 236 GKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA 284
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 123/268 (45%), Gaps = 39/268 (14%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLC---------------R 124
Y +++ L +A R E +++R+K V LC R
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMR 249
Query: 125 FSDG----FFYNVIKIYGNMAGRISKAIETLFDMPSYN-CWPSVKTFNLVLNLLVSAKLY 179
SD YN I +G+I A+E + M S + C +V ++ V++ L
Sbjct: 250 DSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRT 309
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
E + + + A+ G D + L+ GLC+ G +E A + E + C+PN TY +L
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL 369
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDAD-----TVTFNILISGLRKQGKVEEGMKLLERM 294
+HGLC G + EA ++E M S G D T+N LI GL K G++++ +K +RM
Sbjct: 370 VHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRM 429
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ +GC P+ SY ++ GL R +A
Sbjct: 430 RSQGCDPDGVSYSTIVEGLARSGRALQA 457
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 7/213 (3%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL Q + D++PN Y I++ L ++ + D ++M+++ C + + V+
Sbjct: 244 VLEQM-RDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDG 302
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ GR +A + M C P V T++ ++N L A E A G +
Sbjct: 303 LCKL-GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKP 361
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPK-----QNCEPNVRTYSTLMHGLCEKGNVEE 251
+A L+ GLC G L A +++E +C P+V TY+ L+ GLC+ G +++
Sbjct: 362 NAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDD 421
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
A +RM S+G D D V+++ ++ GL + G+
Sbjct: 422 ALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRA 454
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 37/264 (14%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M C P+ TFN ++N G+ + + + A G++ + N LL+GLC+
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 214 L-EAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT--- 268
EA V D + P++ TYSTL+ G C+ G VEE+ LL+ + S G+ D
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 269 --------------------------------VTFNILISGLRKQGKVEEGMKLLERMKG 296
+TFN LISG ++ +E LL+ M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
G + +Y ++ GL R EA++L+ RM +P V+Y ++GLC V +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240
Query: 357 VDWVLKKMVQQGFVPRMGMWREIV 380
VL++M P + + I+
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTIL 264
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 169/379 (44%), Gaps = 53/379 (13%)
Query: 53 KDWLSPTEVL--KIFSNL---RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
+D L PT++ I + D +S +++L + + PN +Y+ II+ L + R
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
+++ ++ + + F D F YN + + +GR S A + L +M P V T+N
Sbjct: 272 SDAQNLFTEMQEKGI--FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA---FYV---- 220
++N V + E +Y G+ + N ++ G C+ L+AA FY+
Sbjct: 330 ALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK 389
Query: 221 ----------------------------LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
L E P++ N TY+TL+HG C G++ A
Sbjct: 390 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 449
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-----------GCYP 301
L ++M S G+ D VT N L+ GL GK+++ +++ + M+ G P
Sbjct: 450 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 509
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ +Y ++ GL+++ +F EA+EL M + P ++Y +I GLC Q +++ +
Sbjct: 510 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 362 KKMVQQGFVPRMGMWREIV 380
M + F P + + ++
Sbjct: 570 VSMGSKSFSPNVVTFNTLI 588
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 145/311 (46%), Gaps = 26/311 (8%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLA-QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+L + +RK +P+ Y +IN + K F+A E + E L R G N I
Sbjct: 312 LLQEMLERK-ISPDVVTYNALINAFVKEGKFFEAAE-----LYDEMLPR---GIIPNTIT 362
Query: 136 IYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
+ G R+ A + + M + C P V TF +++ AK + +
Sbjct: 363 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 422
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ G+ + N L+ G C G+L AA + + P++ T +TL+ GLC+ G ++
Sbjct: 423 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 482
Query: 251 EAFGLLERMESE-----------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+A + + M+ G++ D +T+NILI GL +GK E +L E M +G
Sbjct: 483 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 542
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P++ +Y ++ GL + R EA ++ M + SP+ V++ LI+G C V+D
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 602
Query: 360 VLKKMVQQGFV 370
+ +M ++G V
Sbjct: 603 LFCEMGRRGIV 613
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 6/248 (2%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ AI+ DM PSV F ++ ++V + + +Y + + D NI
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+K C L A + K P+V T++TL+HGLC + V EA +M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VTF L++GL ++G++ E + LL+RM G P +Y ++ G+ K A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 324 ELVGRMICERMS---PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE-I 379
L+ +M E +S P+ V Y +I LC D + +M ++G P + + I
Sbjct: 240 NLLRKM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 380 VGCVTFGK 387
VG + G+
Sbjct: 298 VGFCSSGR 305
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 137/307 (44%), Gaps = 27/307 (8%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------G 142
PN +T ++N L + R ++ R+ DG I YG + G
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRM-------MEDGLQPTQIT-YGTIVDGMCKKG 233
Query: 143 RISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
A+ L M + P+V ++ +++ L + + Q ++T + G+ D
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ G C +G A +L E ++ P+V TY+ L++ ++G EA L + M
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
GI +T+T+N +I G KQ +++ + M KGC P+ ++ ++ G KR +
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL---KKMVQQGFVPRMGMWRE 378
EL+ M + + V+Y LIHG C LV D++ L ++M+ G P +
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFC---LVGDLNAALDLSQQMISSGVCP------D 464
Query: 379 IVGCVTF 385
IV C T
Sbjct: 465 IVTCNTL 471
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI---------QGIYTSAAKLG 193
R+S+A++ M C P+V TF ++N L E G+ + G
Sbjct: 164 RVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223
Query: 194 VEIDACC--------LNILLK-------------------GLCENGNLEAAFYVLDEFPK 226
+D C LN+L K LC++G A + E +
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+ P++ TY++++ G C G +A LL+ M I D VT+N LI+ K+GK E
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+L + M +G PN+ +Y ++ G + R A+++ M + SP ++ LI
Sbjct: 344 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 403
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
G C K ++D +L +M ++G V + ++
Sbjct: 404 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 437
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 140/292 (47%), Gaps = 15/292 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K +P+ +T +I+ AKR D +++ + L ++ YN + I+G + G
Sbjct: 389 KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL--VANTVTYNTL-IHGFCLVGD 445
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-SAKLYGEIQ---GIYTSAAKL------- 192
++ A++ M S P + T N +L+ L + KL ++ + S L
Sbjct: 446 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 505
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GVE D NIL+ GL G A + +E P + P+ TYS+++ GLC++ ++EA
Sbjct: 506 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ M S+ + VTFN LI+G K G+V++G++L M +G ++ Y ++YG
Sbjct: 566 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 625
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A ++ MI + P ++ + ++ G +++ +E +L+ +
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G E LE A + + + P+V + LM + + L ++ME +
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +FNILI K+ + ++ G +P+ ++ +L+GL + R EA
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ +M P+ V++ L++GLC + + + +L +M++ G P + IV
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 75/169 (44%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN++ G+ +A E +MP P T++ +++ L E ++
Sbjct: 510 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S + N L+ G C+ G ++ + E ++ + Y TL++G +
Sbjct: 570 VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKV 629
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
GN+ A + + M S G+ DT+T +++G + ++E + +LE ++
Sbjct: 630 GNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 141/297 (47%), Gaps = 14/297 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------ 140
+ P+ A +T +I + + + ++ +GF +V+ YG +
Sbjct: 127 HQPDTATFTTLIRGIYVEGKIGEALHLFDKM-------IGEGFRPDVVT-YGTLINGLCK 178
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G S AI L M NC P+V +N +++ L + E +++ G+ D
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ LC + +L+E P+V +++T++ LC++G V EA ++++M
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G++ + VT+ L+ G +++E +K+ + M KGC PN SY ++ G +R
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+A L G M + + P V+Y LIHGLC+ + ++D + +MV +P + +R
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 415
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 111/237 (46%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I AI + M PS FN +L + K + + + G+ + L+I
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C + AF VL + K +P+ T++TL+ G+ +G + EA L ++M EG
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D VT+ LI+GL K G ++LL M K C PN +Y ++ L ++ EA
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L M+ + +SP +Y LIH LCN + V +L +MV +P + + +V
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 37/274 (13%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ A L + P TF L+ + V K+ GE ++ G D
Sbjct: 111 RVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKI-GEALHLFDKMIGEGFRPDVVTY 169
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC+ GN AA +L ++NC+PNV Y+T++ LC+ V EAF L M +
Sbjct: 170 GTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVT 229
Query: 262 EGID-----------------------------------ADTVTFNILISGLRKQGKVEE 286
+GI D V+FN ++ L K+GKV E
Sbjct: 230 KGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTE 289
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
++++M +G PN +Y ++ G EA ++ M+C+ P+ +SY LI+
Sbjct: 290 AHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLIN 349
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
G C + ++ ++ +M +Q +P + ++
Sbjct: 350 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLI 383
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 113/245 (46%), Gaps = 2/245 (0%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ P++ T ++++N G + KLG + D L++G+ G
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A ++ D+ + P+V TY TL++GLC+ GN A LL M + + +N
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I L K +V E L M KG P+ +Y +++ L + + L+ M+ +
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRN 391
+ P VS+ ++ LC + V + V+ KM+Q+G P + + ++ C+ D
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326
Query: 392 RVYVT 396
+V+ T
Sbjct: 327 KVFDT 331
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 134/285 (47%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ Y +IN L + A ++ + V+K C+ + F YN I ++++
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSM-VQKNCQ-PNVFAYNTIIDSLCKDRQVTE 219
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A +M + P + T+N +++ L + + + + + D N ++
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G + A V+D+ ++ EPNV TY+ LM G C ++EA + + M +G
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP 339
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ +++N LI+G K ++++ M L M + P++ +Y +++GL +R +A L
Sbjct: 340 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 399
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ P+ V+Y+ L+ LC + + + +LK + P
Sbjct: 400 HEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDP 444
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 131/297 (44%), Gaps = 4/297 (1%)
Query: 74 VISVLNQYSK--RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
V N +S+ K +P+ Y +I+ L + + ++ + K+ D +
Sbjct: 217 VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI--MPDVVSF 274
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + G++++A + + M P+V T+ +++ E ++ +
Sbjct: 275 NTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC 334
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G + N L+ G C+ ++ A Y+ E +Q P+ TYSTL+HGLC +++
Sbjct: 335 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 394
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A L M + + VT+ IL+ L K + E M LL+ ++G P+ +
Sbjct: 395 AIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 454
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
G+ A++L + + + P +Y +I+GLC + L+++ + ++M + G
Sbjct: 455 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 511
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 6/290 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAG 142
+K+ PN Y II+ L + ++ ++ + + + D F YN +I N+
Sbjct: 194 QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS--PDIFTYNSLIHALCNLCE 251
Query: 143 RISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
K + TL +M P V +FN V++ L E + + GVE +
Sbjct: 252 W--KHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTY 309
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G C ++ A V D + C PNV +Y+TL++G C+ +++A L M
Sbjct: 310 TALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 369
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + DTVT++ LI GL ++++ + L M PN +Y+ +L L + E
Sbjct: 370 QELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAE 429
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A L+ + + P I G+C +E + + +G P
Sbjct: 430 AMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 479
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 142/353 (40%), Gaps = 48/353 (13%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + ++ NL + V ++LN+ K P+ + +++ L + + D+
Sbjct: 235 DIFTYNSLIHALCNLCEWKHVATLLNEMVDSK-IMPDVVSFNTVVDALCKEGKVTEAHDV 293
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGR-----ISKAIETLFDMPSYNCWPSVKTFNL 168
+ ++ G NV+ M G + +A++ M C P+V ++N
Sbjct: 294 VDKM-------IQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNT 346
Query: 169 VLNLLVSAK-------LYGE----------------IQGI-----YTSAAKLGVEIDAC- 199
++N + L+GE I G+ A L E+ AC
Sbjct: 347 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 406
Query: 200 ------CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
ILL LC+N L A +L N +P+++ + + G+C G +E A
Sbjct: 407 QIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAAR 466
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L + S+G+ D T++I+I+GL ++G ++E KL M GC N Y + G
Sbjct: 467 DLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGF 526
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
L A +L+ M+ S + + L + L + + +L++ VQ
Sbjct: 527 LRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 128/240 (53%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + K DM S+ P V++++++++ L A E I+ + ++ G +DA
Sbjct: 538 AGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARA 597
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ GLC++G ++ A+ VL+E ++ P V TY +++ GL + ++EA+ L E +
Sbjct: 598 YNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAK 657
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+GI+ + + ++ LI G K G+++E +LE M KG PN ++ ++ L+ +
Sbjct: 658 SKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEID 717
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA M + SP+ +Y LI+GLC + ++M +QG +P + + ++
Sbjct: 718 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMI 777
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 141/291 (48%), Gaps = 23/291 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P Y +I A+RFD +++R++ E+ C S F +++ G ++ +A+
Sbjct: 314 PCAYAYNTMIMGYGSAERFDDAYKLLERLR-ERGCIPSVVSFNSILTCLGK-KRKVDEAL 371
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
TLFD+ + P++ T+N+++++L A E I G+ + +NI++ L
Sbjct: 372 -TLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRL 430
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ LE A + + ++ C PN TY +L+ GL +KG +++A+ L E+M G DA+
Sbjct: 431 CKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANP 490
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA---SYQEVLY--GLLDKKRFPEAK 323
+ + LI G+ E+G K+ + M +G P+ +Y + ++ G ++K
Sbjct: 491 IIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEK------- 543
Query: 324 ELVGRMICERMS-----PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
GR I E M P SY LIHGL + + + M QQGF
Sbjct: 544 ---GRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGF 591
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 2/262 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++I+ L +A + +I Q + + D YN + +G++ KA
Sbjct: 558 PDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFAL--DARAYNAVVDGLCKSGKVDKAY 615
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M + P+V T+ +++ L E ++ A G+E++ + L+ G
Sbjct: 616 EVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGF 675
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G ++ A+ +L+E K+ PNV T+++LM L + ++EA + M+ +T
Sbjct: 676 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNT 735
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T++ILI+GL + K + + M+ +G PN +Y ++ GL +A L R
Sbjct: 736 YTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFER 795
Query: 329 MICERMSPSFVSYKKLIHGLCN 350
P S+ LI G+ N
Sbjct: 796 FKTNGGIPDSASFNALIEGMSN 817
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 120/256 (46%), Gaps = 15/256 (5%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-- 140
K K +P A Y I++ LA+ R D + + K S G NVI +Y ++
Sbjct: 622 KVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAK-------SKGIELNVI-LYSSLID 673
Query: 141 ----AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
GRI +A L +M P+V T+N +++ LV + E + S ++
Sbjct: 674 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSP 733
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ +IL+ GLC AF E KQ PNV TY+T++ GL + GN+ +A+ L
Sbjct: 734 NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLF 793
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
ER ++ G D+ +FN LI G+ + E ++ E + +GC N + +L L+K
Sbjct: 794 ERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLL-DALNK 852
Query: 317 KRFPEAKELVGRMICE 332
E +VG ++ E
Sbjct: 853 TECLEQAAIVGAVLSE 868
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 136/295 (46%), Gaps = 8/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA- 147
PN +++++L +A + + I + E+ C + + ++I G G+I A
Sbjct: 418 PNLLSVNIMVDRLCKANQLEEAHRIFESAS-ERGCNPNSVTYCSLIDGLGK-KGKIDDAY 475
Query: 148 --IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
E + D ++ P + T +L+ N + + + IY + G D LN +
Sbjct: 476 RLFEKMLDA-GHDANPIIYT-SLIRNFFMHGR-KEDGHKIYKEMIRRGGRPDLTLLNTYM 532
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
+ + G +E + ++ P+VR+YS L+HGL + G E + + M +G
Sbjct: 533 DCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFA 592
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D +N ++ GL K GKV++ ++LE MK K +P A+Y ++ GL R EA L
Sbjct: 593 LDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYML 652
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + + Y LI G +++ +L++M+++G P + W ++
Sbjct: 653 FEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 707
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 134/295 (45%), Gaps = 3/295 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ LY + I+ +A D +K L R D + +++ + AGR+ +A
Sbjct: 244 PDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGL-RPDDVSYTSMVWVLCK-AGRLGEAE 301
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M + P +N ++ SA+ + + + + G N +L L
Sbjct: 302 ELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCL 361
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ ++ A + D K++ +PN+ TY+ ++ LC G V EA+ + + ME G+ +
Sbjct: 362 GKKRKVDEALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNL 420
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++ NI++ L K ++EE ++ E +GC PNS +Y ++ GL K + +A L +
Sbjct: 421 LSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEK 480
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
M+ + + Y LI ED + K+M+++G P + + + CV
Sbjct: 481 MLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCV 535
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 90/182 (49%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+L+ L E E A +L + E +V ++TL+ L +G +E A L++ ++
Sbjct: 180 TVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKG 239
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
++ D V +N+ I K G V+ K +K G P+ SY +++ L R E
Sbjct: 240 SCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGE 299
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A+EL G+M ER P +Y +I G + + +D +L+++ ++G +P + + I+
Sbjct: 300 AEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILT 359
Query: 382 CV 383
C+
Sbjct: 360 CL 361
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 20/293 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-FYNVIKIYGNMAGRISKA 147
PN A L+ L +++R +ED + I + +F F Y V+ A + +A
Sbjct: 140 PNPACAALVAT-LVRSRR---LEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERA 195
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL--NILL 205
+E L M SV F ++ L +G A L E+ CL +I+L
Sbjct: 196 LELLRQMQDVGYEVSVPLFTTLVRALAR-------EGQMEPALALVDEVKGSCLEPDIVL 248
Query: 206 KGLC-----ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+C + G+++ A+ E P+ +Y++++ LC+ G + EA L +ME
Sbjct: 249 YNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQME 308
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+E +N +I G + ++ KLLER++ +GC P+ S+ +L L K++
Sbjct: 309 AERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 368
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EA L M + P+ +Y +I LC V + + +M G P +
Sbjct: 369 EALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNL 420
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 123/239 (51%), Gaps = 2/239 (0%)
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+IK + NM +I KAI+ + + + P V +N V++ A + K
Sbjct: 118 LIKGFFNMK-KIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKR 175
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G E D NIL+ C G L+ A V+D+ K NC+P V TY+ L+ +G ++EA
Sbjct: 176 GFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEA 235
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LL+ M S G+ D T+N++++G+ K+G ++ + L R+ GC ++Y +L
Sbjct: 236 MKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRD 295
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
LL++ ++ ++L+ M+ + P+ ++Y LI LC +++ VLK M ++ P
Sbjct: 296 LLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAP 354
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 159/352 (45%), Gaps = 21/352 (5%)
Query: 44 DHHAYKLNH-------KDWLSPTEVLKIFSNLRD---PISVISVLNQYSKRKDYNPNEAL 93
D Y L H D + T+++K F N++ I V+ +L ++ K P+
Sbjct: 94 DESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGK-----PDVFA 148
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR--ISKAIETL 151
Y +I+ +A R D ++ R+K K D YN++ GN GR + A+ +
Sbjct: 149 YNAVISGFCKADRVDHASKVLDRMK--KRGFEPDVVTYNIL--IGNFCGRGRLDLALRVM 204
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+ NC P+V T+ +++ ++ E + G+ D N+++ G+C+
Sbjct: 205 DQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKE 264
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G L+ AF L K C V TY+ L+ L +G E L+ M +G + + +T+
Sbjct: 265 GMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITY 324
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
+ LI+ L + GK++E +L+ MK K P+ SY ++ L + + A E + MI
Sbjct: 325 STLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMIS 384
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
P +SY ++ LC ++ + +K+ + G P G + + G +
Sbjct: 385 GGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGAL 436
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 38/265 (14%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN Y+ +I L + + D +++++ +K + L DG+ Y+ + G++
Sbjct: 315 KGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALA--PDGYSYDPLISALCREGKV 372
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
AIE L DM S P + ++N +L
Sbjct: 373 DLAIEFLDDMISGGHLPDILSYNSIL---------------------------------- 398
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
LC+NGN + A + ++ + C PN +Y+TL L G+ A G++ M S GI
Sbjct: 399 -ASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGI 457
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D D +T+N LIS L + G V++ ++LL M + + C P SY VL GL +R +A
Sbjct: 458 DPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAI 517
Query: 324 ELVGRMICERMSPSFVSYKKLIHGL 348
E++ M+ E P+ +Y LI G+
Sbjct: 518 EVLAAMVNEGCLPNETTYTLLIQGI 542
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 145/309 (46%), Gaps = 3/309 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y +I+ R+ + ++ ++ E + D + +N++ GRI +A L
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENV--DPDDYTFNILIDALCKEGRILEAQGVLAM 290
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P + T+N ++ S + E + ++ K G+E D N+L+ G C+
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + E +N P + +Y++L+ GLC G + LL+ M D VT+NI
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI L K+G++ E + +L M KG PN +Y ++ G + AK++ RM+
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNR 392
+ P ++Y LI+G C ++V++ + K+M + +P + + ++ G G+ +
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530
Query: 393 VYVTETVDS 401
+ E DS
Sbjct: 531 ELLDEMCDS 539
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 120/256 (46%), Gaps = 37/256 (14%)
Query: 161 PSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P++ TFN ++N ++ ++ + A+ G D L+ GL +NG ++AA +
Sbjct: 123 PNLVTFNTIINGFCINGMIFKALDFCQNLLAQ-GYLFDQFTYGTLINGLSKNGQIKAALH 181
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL------------------------ 255
+L E K + +PN+ YS L+ GLC+ G V +A GL
Sbjct: 182 LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCC 241
Query: 256 -----------LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
L +M E +D D TFNILI L K+G++ E +L M +G P+
Sbjct: 242 SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV 301
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ G ++ EA+EL RM+ + P ++Y LI G C K+V++ + K++
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 365 VQQGFVPRMGMWREIV 380
+ VP + + ++
Sbjct: 362 CNKNLVPTIASYNSLI 377
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 4/235 (1%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+N +++ S + E+ + T + V+ D NIL+ LC+ G + A VL
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
K+ +P++ TY+ LM G C + NV EA L RM G++ D + +N+LI G K V
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+E M L + + K P ASY ++ GL + R K+L+ M P V+Y L
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETV 399
I LC + + + VL M+++G P + + ++ G RN V V + +
Sbjct: 412 IDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMD----GYCLRNNVNVAKDI 462
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 2/281 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+ Y PN + IIN D Q + + D F Y + + G+
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGY--LFDQFTYGTLINGLSKNGQ 175
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I A+ L +M + P++ ++ +++ L + G+ + + G+ +DA N
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNS 235
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C G + +L + ++N +P+ T++ L+ LC++G + EA G+L M G
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D VT+N L+ G + V E +L RM +G P+ +Y ++ G K EA
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAM 355
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
L + + + P+ SY LI GLCN + V +L +M
Sbjct: 356 VLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM 396
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 9/253 (3%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D YNV+ I G ++ LF ++ + N P++ ++N +++ L ++ ++ +
Sbjct: 334 DVLNYNVL-IDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKL 392
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
D NIL+ LC+ G + A VL K+ +PN+ TY+ +M G C
Sbjct: 393 LDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCL 452
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+ NV A + RM G++ D + +N+LI+G K V+E + L + M+ K P+ AS
Sbjct: 453 RNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ GL + R P +EL+ M SP ++Y L+ C + + + +++V
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV 572
Query: 366 QQGFVPRMGMWRE 378
+ G+W +
Sbjct: 573 E-------GIWPD 578
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 1/240 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+GRIS + L +M P V T+N++++ L E G+ K GV+ +
Sbjct: 383 SGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ G C N+ A + + K EP++ Y+ L++G C+ V+EA L + M
Sbjct: 443 YNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ + D ++N LI GL G++ +LL+ M G P+ +Y +L + F
Sbjct: 503 HKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFD 562
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A L R I E + P F + ++ LC + ++ + LK ++ G P + + ++
Sbjct: 563 KAISLF-RQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILI 621
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 132/297 (44%), Gaps = 3/297 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K+ P A Y +I+ L + R ++ ++ + + D YN++ GRI
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA--QPPDVVTYNILIDALCKEGRI 421
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ L M P++ T+N +++ + I+ K G+E D N+L
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVL 481
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C+ ++ A + E +N P++ +Y++L+ GLC G + LL+ M G
Sbjct: 482 INGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ 541
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+NIL+ K ++ + L ++ +G +P+ + ++ L ++ A++
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAED 600
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ ++ SP+ +Y LI+ LC + +L KM P + I+G
Sbjct: 601 ALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIG 657
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P F+ +L +V Y ++T G+ IL+ + AF +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L K +PN+ T++T+++G C G + +A + + ++G D T+ LI+GL K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+++ + LL+ M+ PN Y ++ GL +A L ++ + V+
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LI G C+ ++V +L KMV++ P
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDP 263
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 5/232 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
LR+ ++V + + P+ Y ++IN + + D + + ++ + L D
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL--IPD 509
Query: 128 GFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
YN +I N+ GRI E L +M P V T+N++L+ + + + ++
Sbjct: 510 IASYNSLIDGLCNL-GRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLF 568
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G+ D + ++ LC+ L+ A L C PNV+TY+ L++ LC+
Sbjct: 569 RQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKD 627
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
G+ EA LL +ME D +TF I+I L ++ + ++ KL E M +G
Sbjct: 628 GSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 103/247 (41%), Gaps = 3/247 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K PN Y +++ + +DI R+ L D YNV+
Sbjct: 433 KKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL--EPDILNYNVLINGYCKTEM 490
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +AI +M N P + ++N +++ L + +Q + G D NI
Sbjct: 491 VDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL C+ + A + + + P+ T ++ LC+ ++ A L+ + G
Sbjct: 551 LLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ T+ ILI+ L K G E M LL +M+ P++ +++ ++ LL + +A+
Sbjct: 610 CSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAE 669
Query: 324 ELVGRMI 330
+L MI
Sbjct: 670 KLREEMI 676
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 68/172 (39%)
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C N++ A + + P + L+ + G+ A L +++S+GI
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
TF ILI+ Q LL + G PN ++ ++ G +A +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ + +Y LI+GL ++ +L++M + P + M+ ++
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALI 202
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
H C NV++A RM T F+ L+ + + G + L +++ KG
Sbjct: 28 HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVDW 359
P+ A++ ++ + A L+ ++ P+ V++ +I+G C N + + +D+
Sbjct: 88 PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147
Query: 360 VLKKMVQQGFV 370
+ ++ QG++
Sbjct: 148 C-QNLLAQGYL 157
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 150/308 (48%), Gaps = 3/308 (0%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
S + +L++ + K PN Y+ +++ + +D ++ ++ + S G YN
Sbjct: 369 SAVRMLDEM-EEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQG--YN 425
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
I G++ +A+ + +M S C P + T+N ++ L + E + I+ + +
Sbjct: 426 GIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEE 485
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GV + N L+ L +G + + +E C +V +Y+ L+ LC++GNV+ +
Sbjct: 486 GVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRS 545
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LLE M ++GI + ++N+LI+ L K GKV + ++L + M +G P+ +Y ++ G
Sbjct: 546 MMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLING 605
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L A L+ ++ E + P V+Y LI C +L++D +L K V G VP
Sbjct: 606 LCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPN 665
Query: 373 MGMWREIV 380
W +V
Sbjct: 666 ERTWGMMV 673
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 142/311 (45%), Gaps = 33/311 (10%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ LY +I+ L ++ + + + F V+ + G G + +A
Sbjct: 213 PDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCG--LGHVREAA 270
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE-------------------IQG----- 184
+ M + C PSV T+ +L L + E I+G
Sbjct: 271 RLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEG 330
Query: 185 -------IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
+Y G D NIL+ GLC+ G +A +LDE ++ C PN+ TYS
Sbjct: 331 KLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYS 390
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
TL+H C G ++A +L++M ++G ++ +N +I L K GK++E M+L++ MK +
Sbjct: 391 TLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQ 450
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
GC P+ +Y ++Y L + + EA+ + G ++ E + + ++Y LIH L + ++
Sbjct: 451 GCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEG 510
Query: 358 DWVLKKMVQQG 368
+ +MV G
Sbjct: 511 LRLANEMVLHG 521
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 140/288 (48%), Gaps = 3/288 (1%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
L T+I LA+ K A E + + K C D YN++ GR A+ L
Sbjct: 319 LNTVIRGCLAEGKLARATE--LYEMMGSKGCP-PDVHTYNILMHGLCKLGRCGSAVRMLD 375
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M C P++ T++ +L+ ++ + + + + G +++ N ++ L ++G
Sbjct: 376 EMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDG 435
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
L+ A ++ E Q C+P++ TY+T+++ LC ++EA + + EG+ A+ +T+N
Sbjct: 436 KLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYN 495
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
LI L G+ +EG++L M GC + SY ++ L + + L+ M+ +
Sbjct: 496 TLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTK 555
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P+ SY LI+ LC V D + K+M+ QG P + + ++
Sbjct: 556 GIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 603
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 144/338 (42%), Gaps = 33/338 (9%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ +L+Q +R P+ Y +++ LA+A + +R+ +++ + F + V
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTT--FTFGV 185
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
GR A+ L M + C P + V++ LV+ E + +G
Sbjct: 186 AARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMG 245
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
D N ++ GLC G++ A ++D C P+V TY L+ GLC +EA+
Sbjct: 246 CAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY 305
Query: 254 GLLER-------------------------------MESEGIDADTVTFNILISGLRKQG 282
+L R M S+G D T+NIL+ GL K G
Sbjct: 306 AMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLG 365
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+ +++L+ M+ KGC PN +Y +L+ + +A+ ++ +M + S + Y
Sbjct: 366 RCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYN 425
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+I+ L +++ ++++M QG P + + I+
Sbjct: 426 GIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTII 463
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 145 SKAIETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A+ L MP + PS +++N VL+ L A + + +Y + V +
Sbjct: 126 GRALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 185
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+ LC G A +L + C P+ Y T++H L +G V EA LL+ M G
Sbjct: 186 AARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMG 245
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
AD TFN ++ GL G V E +L++RM GC P+ +Y +L GL ++ EA
Sbjct: 246 CAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY 305
Query: 324 ELVGRM--------------------------ICERMS-----PSFVSYKKLIHGLCNQK 352
++GR+ + E M P +Y L+HGLC
Sbjct: 306 AMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLG 365
Query: 353 LVEDVDWVLKKMVQQGFVP-------------RMGMWRE 378
+L +M ++G P R GMW +
Sbjct: 366 RCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDD 404
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 134/296 (45%), Gaps = 1/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ ++PN YTL++ K + E ++Q I+ K + F VI Y M GR+
Sbjct: 307 RGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQM-GRM 365
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A L +M ++ +N+++N E I +GV D N L
Sbjct: 366 EDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSL 425
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C+ G + AF + + TY+ L+ G C G++++A L M +GI
Sbjct: 426 VDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGI 485
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ ++ + L+ G K GK E+ + L + +G N+ ++ V+ GL +R PEA+E
Sbjct: 486 APNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEE 545
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LV +M R P ++Y+ L G C ++ +L ++ GF P + + ++
Sbjct: 546 LVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLI 601
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 11/228 (4%)
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC----------LNILLKGLCENGNLEA 216
NLVL LV + +I K+ ID NI++ GLC+ G +E
Sbjct: 684 NLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIED 743
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A +L + + + TYS+L+HG G V+ AF L + M S G+ + VT+N LI
Sbjct: 744 AKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIY 803
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
GL K G++ + L +++ KG PN+ +Y ++ EA +L RMI E + P
Sbjct: 804 GLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHP 863
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR-MGMWREIVGCV 383
+ +Y LI+GLC Q +E+ +L +M++ P + W I G V
Sbjct: 864 TVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYV 911
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G +G ++ AF + D PN+ TY++L++GLC+ G + A L +++ ++G
Sbjct: 766 LIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKG 825
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I + +T+N LI K G + E KL +RM +G +P +Y ++ GL + EA
Sbjct: 826 ISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAI 885
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+L+ +MI + P++V+Y LI G E VD + + Q V + R +
Sbjct: 886 KLLDQMIENNVDPNYVTYWTLIQGYVR---CESVDVPIMPLDQSTIVVKASPRRAV 938
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 2/265 (0%)
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
++V K FS F +++ N AG++ A++ +M + C S+++ N +LN L
Sbjct: 163 VEVYKEFSFSAASFDLLLRALAN-AGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQT 221
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
G ++ + G D + I+ K C+ + A ++E K E N+ Y
Sbjct: 222 GDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAY 281
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM-K 295
+M+G CE G +A +L+ + G + VT+ +L+ G + +EE +++ + K
Sbjct: 282 HAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRK 341
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
K + A + V+ G R +A L+ M+ R+ + Y +I+G C +
Sbjct: 342 NKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMV 401
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
+ +L +M G P + +V
Sbjct: 402 EAHNILHEMTGVGVRPDTYSYNSLV 426
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 150/359 (41%), Gaps = 37/359 (10%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
T ++K + N ++ V+ + K K +EA++ +IN Q R + ++ +
Sbjct: 317 TLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMV 376
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+L + F YN++ GR+ +A L +M P ++N +++ L
Sbjct: 377 DSRLQ--VNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGL 434
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF-------------------Y 219
+ Y + + G N LLKG C G+++ A
Sbjct: 435 MNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCST 494
Query: 220 VLDEFPK----------------QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+LD F K + N T++T+++GLC+ + EA L+++M+
Sbjct: 495 LLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWR 554
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D +T+ L SG K G ++ ++L ++ G P + ++ G K+ +
Sbjct: 555 CPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVN 614
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
+++ M +SP+ V+Y LI G C + + + +M+++G VP + + +V C
Sbjct: 615 DILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSC 673
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 135/308 (43%), Gaps = 28/308 (9%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N + +IN L + +R E+++ ++K + C + + Y + G + +A
Sbjct: 523 NTTTFNTVINGLCKIERMPEAEELVDKMKQWR-CPPDIITYRTLFSGYCKI-GDMDRASR 580
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
L ++ + P+++ FN ++ AK +G++ I + G+ + L+ G C
Sbjct: 581 ILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWC 640
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT- 268
+ G+L A+ + E ++ PN+ S+L+ KG +EA +L+ + + D
Sbjct: 641 KEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDIS 700
Query: 269 -------------------------VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
+ +NI+I GL K G++E+ LL +K KG ++
Sbjct: 701 APRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADN 760
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y +++G A +L M+ ++P+ V+Y LI+GLC + + KK
Sbjct: 761 FTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKK 820
Query: 364 MVQQGFVP 371
+ +G P
Sbjct: 821 LWTKGISP 828
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
+++ + ++ ++I L + R + ++++ +K + +D F Y+ + + +G +
Sbjct: 720 NHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGF--VADNFTYSSLIHGCSASGFVD 777
Query: 146 KAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + M S P++ T+N L+ L S +L + ++ G+ +A N L
Sbjct: 778 VAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVS-LFKKLWTKGISPNAITYNTL 836
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ C++G + AF + ++ P V TYS L++GLC +G +EEA LL++M +
Sbjct: 837 IDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNV 896
Query: 265 DADTVTFNILISG 277
D + VT+ LI G
Sbjct: 897 DPNYVTYWTLIQG 909
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 137/295 (46%), Gaps = 2/295 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D N ++++ ++ FD + ++ ++EK C F D +NV+ AG +
Sbjct: 152 DSEVNAYTLNIMVHSYCKSLEFDKADTVIS--EMEKRCVFPDVVTHNVLIDARFRAGDVD 209
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
AI + M + P + TFN VL L + + + + ++ + + V D NIL+
Sbjct: 210 AAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILI 269
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C G +E A E ++ P+V ++S L+ +G ++ A L M+ G+
Sbjct: 270 GGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLV 329
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D V + ++I G + G + E +++ + M G GC P+ +Y +L GL + R +A+EL
Sbjct: 330 PDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEEL 389
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ M ++P ++ LIHG C E + ++ Q P + + ++
Sbjct: 390 LNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLI 444
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 127/265 (47%), Gaps = 2/265 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+++ P+ ++ +I + + D ++ +K L DG Y ++ AG
Sbjct: 289 QQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK--GLGLVPDGVIYTMVIGGFCRAG 346
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+S+A+ +M C P V T+N +LN L + + + + GV D C
Sbjct: 347 SMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFT 406
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C +GN E A + D Q P+V Y++L+ G+C KG++ +A L + M +
Sbjct: 407 TLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAR 466
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
I + VT++ILI ++G+VEE L+ M KG PN +Y ++ G +
Sbjct: 467 EIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKG 526
Query: 323 KELVGRMICERMSPSFVSYKKLIHG 347
++ + +M+ + + P +++ LIHG
Sbjct: 527 QQFLQKMMQDNILPDLITFNTLIHG 551
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 136/296 (45%), Gaps = 2/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P + ++ L + +RFD +++ + +++ D +N++ G +
Sbjct: 221 KGLKPGIVTFNSVLKGLCKHRRFDKAKEVFR--AMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A++ +M P V +F+ ++ L + LG+ D ++
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMV 338
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C G++ A V DE C P+V TY+TL++GLC++ + +A LL M+ G+
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGV 398
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D TF LI G + G E+ ++L + + + P+ +Y ++ G+ K +A E
Sbjct: 399 TPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANE 458
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L M + P+ V+Y LI C + VE+ L +MV +G +P + + I+
Sbjct: 459 LWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSII 514
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ A L +M P + +V+ A E + LG D
Sbjct: 311 GKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTY 370
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL GLC+ L A +L+E ++ P++ T++TL+HG C GN E+A L + +
Sbjct: 371 NTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLH 430
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + D V +N LI G+ ++G + + +L + M + +PN +Y ++ +K + E
Sbjct: 431 QRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEE 490
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A + M+ + P+ ++Y +I G C V+ L+KM+Q +P + + ++
Sbjct: 491 AFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLI 549
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 125/281 (44%), Gaps = 33/281 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK----VEKLCRFS--------DGFFYNVIKI 136
P+ Y ++N L + R E+++ +K LC F+ DG F +++
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQL 424
Query: 137 YGNM---------------------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
+ + G ++KA E DM + +P+ T++++++
Sbjct: 425 FDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCE 484
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
E G G + N ++KG C +GN++ L + + N P++ T
Sbjct: 485 KGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLIT 544
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
++TL+HG ++ N+ AF + ME E + D VT+N++I+G +QG +EE ++ ++M
Sbjct: 545 FNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMG 604
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G P+ +Y ++ G + EA +L M+ +P
Sbjct: 605 ASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 1/171 (0%)
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
+ E N T + ++H C+ ++A ++ ME + D VT N+LI + G V+
Sbjct: 152 DSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAA 211
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+ L++ M KG P ++ VL GL +RF +AKE+ M ++P S+ LI G
Sbjct: 212 IALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGG 271
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV-TFGKDNRNRVYVTE 397
C VE+ K+M Q+G P + + ++G T GK + Y+ E
Sbjct: 272 FCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLRE 322
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A L +M S P++ T+N ++ + + Q + + D
Sbjct: 486 GQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITF 545
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G + N+ AF V + K+ +P+ TY+ +++G E+GN+EEA + ++M +
Sbjct: 546 NTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGA 605
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
GI+ D T+ LI+G G +E +L + M +G P+
Sbjct: 606 SGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 12/184 (6%)
Query: 89 PNEALYTLIINKLAQAKR----FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
PN Y+++I+ + + F +++++ + + + ++ ++IK Y +G +
Sbjct: 470 PNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYN-----SIIKGYCR-SGNV 523
Query: 145 SKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
K + L M N P + TFN L+ + ++G ++ K V+ DA N+
Sbjct: 524 KKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFN-VFNIMEKEMVQPDAVTYNM 582
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G E GN+E A V + EP+ TY +L++G GN +EAF L + M G
Sbjct: 583 IINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRG 642
Query: 264 IDAD 267
D
Sbjct: 643 FAPD 646
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 158/340 (46%), Gaps = 13/340 (3%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + T ++ F + + V Q R + P+ Y+ +I+ L + R D+
Sbjct: 149 DIFTYTTLITGFCKSKKSDDALRVFEQLVARG-FRPDVVTYSCLIDGLCKEGRLKEAIDL 207
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
R+ C + + ++I + M G++ +A+ L M P V T+ ++N
Sbjct: 208 FGRMIKSGSCMPNTVTYNSLISGFCRM-GKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 266
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ + + G+ D L+ GLC L A ++L E +++C P V
Sbjct: 267 CKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 326
Query: 234 RTYSTLMHGLCEKGNVEEAFG-LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TY+T++ G C +EEA +LE M+ + V+FNI+I GL K + E M+L+E
Sbjct: 327 YTYNTILDGYCRANQLEEARKFMLEEMDCP---PNVVSFNIMIRGLCKVNRSSEAMELVE 383
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS-PSFVSYKKLIHGLCNQ 351
+ + C P+ Y V+ GL +K+ EA + +M+ E P+ ++Y LI GLCN
Sbjct: 384 EARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNA 443
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRN 391
+++ + +++G VP +G + ++ F K NR+
Sbjct: 444 GMLDRA----RGYIEKGCVPNIGTYNLLID--AFRKANRD 477
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 136/282 (48%), Gaps = 5/282 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
++ PN YT++I+ L + R D E + K+ K C YN + A R
Sbjct: 75 RNLTPNVVTYTVLIDGLCKGGRVD--EAVALLSKMRKKC-VPTAVTYNSLISGLCKAERA 131
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S+A + L +M C P + T+ ++ +K + ++ G D + L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 205 LKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+ GLC+ G L+ A + K +C PN TY++L+ G C G ++EA LLERM G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D VT+ L++G K ++++ LL +M KG P+ ++ ++ GL + R +A
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV-DWVLKKM 364
++G M + SP+ +Y ++ G C +E+ ++L++M
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM 353
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 92/168 (54%), Gaps = 1/168 (0%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++GLC+ LE A L + + P+V TY+ ++H LC + + EA LE M +
Sbjct: 17 LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + VT+ +LI GL K G+V+E + LL +M+ K C P + +Y ++ GL +R EA
Sbjct: 77 LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERASEAY 135
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L+ M+ P +Y LI G C K +D V +++V +GF P
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 148/317 (46%), Gaps = 21/317 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
P+ YT +I ++K+ D + +++ + GF +V+ Y + G
Sbjct: 148 PDIFTYTTLITGFCKSKKSDDALRVFEQL-------VARGFRPDVV-TYSCLIDGLCKEG 199
Query: 143 RISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ +AI+ M S +C P+ T+N +++ E + A+ G D
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G C+ L+ A+ +L++ ++ P+V T+++LM GLC + + +A +L M
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMK-LLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ T+N ++ G + ++EE K +LE M C PN S+ ++ GL R
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD---CPPNVVSFNIMIRGLCKVNRSS 376
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ-GFVPRMGMWRE- 378
EA ELV R +P V Y +I GLC +K V++ V +KM+++ G +P +
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436
Query: 379 IVGCVTFGKDNRNRVYV 395
I G G +R R Y+
Sbjct: 437 ITGLCNAGMLDRARGYI 453
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ LC L A L+E +N PNV TY+ L+ GLC+ G V+EA LL +M +
Sbjct: 52 VIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKC 111
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+N LISGL K + E LLE M GC P+ +Y ++ G K+ +A
Sbjct: 112 VPT-AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDAL 170
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ +++ P V+Y LI GLC + +++ + +M++ G
Sbjct: 171 RVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 121/252 (48%), Gaps = 25/252 (9%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG----- 142
+P+ YT ++N + R D D++ ++ G +V+ M G
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMT-------RKGLTPDVVTFTSLMDGLCREN 305
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+S A+ L +M +C P+V T+N +L+ A E + ++ + N
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFN 363
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ES 261
I+++GLC+ A +++E ++ C P+V Y+T++ GLC + V+EA + +M E
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG---KGCYPNSASYQEVLYGLLDKKR 318
G +++T++ LI+GL G +L+R +G KGC PN +Y ++ R
Sbjct: 424 PGCLPNSITYSTLITGLCNAG-------MLDRARGYIEKGCVPNIGTYNLLIDAFRKANR 476
Query: 319 FPEAKELVGRMI 330
+A+EL+ M+
Sbjct: 477 DEDARELLDDMV 488
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 3/170 (1%)
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+C + TY++L+ GLC+ +E+A L +M S+G D T+ +I L + ++ E
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
K LE M + PN +Y ++ GL R EA L+ +M ++ P+ V+Y LI
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLIS 123
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRNRVY 394
GLC + + +L++MV G +P + + ++ C + D+ RV+
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 173
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 10/246 (4%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ T ++ F L +LNQ + RK P+ +T +++ L + R I
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMT-RKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ ++ K C + + YN I A ++ +A + F + +C P+V +FN+++ L
Sbjct: 314 LGEMR-RKSCSPT-VYTYNTILDGYCRANQLEEARK--FMLEEMDCPPNVVSFNIMIRGL 369
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPN 232
E + A + D ++ GLC ++ A V + ++ C PN
Sbjct: 370 CKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPN 429
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TYSTL+ GLC G ++ A G +E+ G + T+N+LI RK + E+ +LL+
Sbjct: 430 SITYSTLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLD 485
Query: 293 RMKGKG 298
M +G
Sbjct: 486 DMVQRG 491
>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
Length = 693
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 1/232 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG++ A+ L M C P + N+ +N+LV A + ++GVE D
Sbjct: 142 AGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYT 201
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+KGLC + A ++ + C P+ +Y T+M LC++ VEE GLL+RM
Sbjct: 202 YNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMR 261
Query: 261 SE-GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
++ G+ D VT+N+LI GL K G +E ++ L +GK + Y +++ R
Sbjct: 262 NDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRM 321
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EAKE+VG MI + P V+Y ++ G C ++ ++K M + P
Sbjct: 322 AEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKP 373
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 145/288 (50%), Gaps = 11/288 (3%)
Query: 89 PNEALYTLIINKLAQAKRFD-AIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
P+ ++ + +N L A R D A+E + M+R+ VE D + YN + A R+
Sbjct: 162 PDISICNMAVNVLVVAGRVDKALEFAERMRRVGVE-----PDVYTYNCLIKGLCGARRVV 216
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACCLNIL 204
A+E + M C P ++ V++ L K E++G+ G+ D N+L
Sbjct: 217 DAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVL 276
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GL ++G+ + A L E + + YS ++H C G + EA ++ M S+G
Sbjct: 277 IHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGC 336
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VT++ ++ G + G++++ K+++ M C PN+ ++ +L GL + EA E
Sbjct: 337 QPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWE 396
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQQGFVP 371
L+ + E +PS ++Y ++HG + KL E D V+ +M+Q+GF P
Sbjct: 397 LLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVV-QMLQKGFFP 443
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 132/268 (49%), Gaps = 3/268 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P++ Y +++ L + KR + + ++QR++ + F D YNV+ I+G G +A
Sbjct: 232 PDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGL-FPDQVTYNVL-IHGLAKHGHADEA 289
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E L + ++ +++ E + I G + D + ++ G
Sbjct: 290 LEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDG 349
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C G L+ A ++ K +C+PN T++ L++GLC+ G EA+ LL + E E
Sbjct: 350 FCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPS 409
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+++++ G R++GK++E ++ +M KG +P + +++ L + EAK+ +
Sbjct: 410 DITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFME 469
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVE 355
+ + + + V++ +IHG Q +E
Sbjct: 470 QCQSKGCTINVVNFTTVIHGFSRQGDLE 497
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 142/293 (48%), Gaps = 4/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGRISKA 147
P++ Y ++I+ LA+ D + ++ ++ + RF D Y+ I + GR+++A
Sbjct: 268 PDQVTYNVLIHGLAKHGHAD---EALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEA 324
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E + +M S C P V T++ V++ + + + K + + LL G
Sbjct: 325 KEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNG 384
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G A+ +L++ ++ P+ TYS +MHG +G ++E+ ++ +M +G
Sbjct: 385 LCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPT 444
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TV N+LI L K GK E +E+ + KGC N ++ V++G + A L+
Sbjct: 445 TVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMD 504
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M P V+Y ++ L + +++ +++KM+ +G +P +R ++
Sbjct: 505 DMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVI 557
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%)
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G++ AF +Q + ++ LM G + A +L M+ +G D
Sbjct: 108 GDVRRAFEFFRWADRQWRYRHAPEFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISIC 167
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N+ ++ L G+V++ ++ ERM+ G P+ +Y ++ GL +R +A E++G M+
Sbjct: 168 NMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQ 227
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
P +SY ++ LC +K VE+V +L++M
Sbjct: 228 NGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRM 260
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 142 GRISKAIETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G+ S+A E L + W PS T+++V++ E + + G
Sbjct: 389 GKTSEAWE-LLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVE 447
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+N+L+ LC++G A +++ + C NV ++T++HG +G++E A L++ M
Sbjct: 448 INLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMY 507
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
D VT+ +++ L K+G+++E L+E+M +G P +Y+ V++ +K
Sbjct: 508 LSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLE 567
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLC 349
+ L+ +M+ + S +Y +++ LC
Sbjct: 568 DLLNLLEKMLARQEMKS--AYNQVVEKLC 594
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%)
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+G+V AF + + F L+ + GK+ M++L M+ GC P+ +
Sbjct: 107 RGDVRRAFEFFRWADRQWRYRHAPEFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISI 166
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+ L+ R +A E RM + P +Y LI GLC + V D ++ M+
Sbjct: 167 CNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVML 226
Query: 366 QQGFVP 371
Q G P
Sbjct: 227 QNGCPP 232
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 132/267 (49%), Gaps = 2/267 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ AL+T ++ L +AKR ++ ++ EK D YN + AG +A+
Sbjct: 223 PDRALHTAMVRTLLKAKRVKEAREVFGQM--EKCGFPPDAIAYNTMIDGLAKAGHAQEAL 280
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M + C P+ T+ +++N L A + ++ A G ++ L+ G
Sbjct: 281 KVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGF 340
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
++G ++ A + DE + P+V T++ ++ GLC+ GN E+A E M G +
Sbjct: 341 AKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNV 400
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ +I GL K G+V ++++ M GC+P+S +Y +L G R EA +L+
Sbjct: 401 VTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDE 460
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVE 355
+ SP+ Y L++GLC+ VE
Sbjct: 461 LDKCSSSPNLQLYSSLVNGLCDGGSVE 487
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 9/287 (3%)
Query: 89 PNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PN + ++I A+ +R D +IM+R K C+ F ++ AG
Sbjct: 152 PNTFSFNILIRSFARTRRADDAVTCFEIMKR----KRCKPDLHTFLILVDCLCK-AGMDE 206
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVL-NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA E +M + P + + + L+ AK E + ++ K G DA N +
Sbjct: 207 KAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTM 266
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GL + G+ + A VLD + C P TY L++ LC+ G +E A L M + G
Sbjct: 267 IDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGF 326
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
++V + LI G K G+++E L + M G P+ ++ ++ GL F +A +
Sbjct: 327 RPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ P+ V+Y +I GL V + ++K M+ G P
Sbjct: 387 SFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFP 433
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 141/305 (46%), Gaps = 15/305 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R PN YT II L++ R IM+ + + C F D Y + GR
Sbjct: 393 RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM-IAHGC-FPDSVTYICLLDGFCKLGR 450
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY------TSAAKLGVEID 197
+ +A + L ++ + P+++ ++ ++N L G ++ + AA ++
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDG---GSVEKTLDDLFEQSKAAAETLDPG 507
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE--KGNVEEAFGL 255
CC I+ GLC+ G L+ A + + C+P+ TY+ L++GLC + VE AF L
Sbjct: 508 LCCSIIV--GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFAL 565
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
L +E G D VT+ L GL K G+V+ +K+LE +G + +Y + GL
Sbjct: 566 LHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCY 625
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
+ + A L M+ + +P +Y +I+GL K +ED +M+ +G P +
Sbjct: 626 QGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVAT 685
Query: 376 WREIV 380
+ +V
Sbjct: 686 YTALV 690
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 136/297 (45%), Gaps = 33/297 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
P+ Y +++ + R D ++ + C S +++Y ++ G
Sbjct: 433 PDSVTYICLLDGFCKLGRLDEAAQLLDELDK---CSSSPN-----LQLYSSLVNGLCDGG 484
Query: 143 RISKAIETLFDM---------PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ K ++ LF+ P C ++++ L + +L E I+ G
Sbjct: 485 SVEKTLDDLFEQSKAAAETLDPGLCC-------SIIVGLCKTGRL-DEACRIFQRMVSEG 536
Query: 194 VEIDACCLNILLKGLCEN--GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
+ DA NIL+ GLC + +E AF +L + K P+ TY+ L GLC+ G V+
Sbjct: 537 CKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDR 596
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A +LE S G +AD V + L +GL QG+V+ + L + M +G P++A+Y ++
Sbjct: 597 AVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIIN 656
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
GL+ K+ +A + MI + P+ +Y L+ LC+ V++ + M+ +G
Sbjct: 657 GLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARG 713
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 6/288 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+PN LY+ ++N L + ++D+ ++ K G ++I + GR+ +
Sbjct: 467 SPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAE-TLDPGLCCSII-VGLCKTGRLDE 524
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAK--LYGEIQGIYTSAAKLGVEIDACCLNIL 204
A M S C P T+N+++N L ++ + K+G DA L
Sbjct: 525 ACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPL 584
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
GLC+ G ++ A +L+E + +V Y+ L GLC +G V+ A L + M +G
Sbjct: 585 CIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D + +I+GL K K+E+ K + M GKG P A+Y ++ L EA
Sbjct: 645 APDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFH 704
Query: 325 LVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + S + Y LIHG C V+ + + M+ +G VP
Sbjct: 705 RFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 102/245 (41%), Gaps = 36/245 (14%)
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
V T+N ++NLLV+ K Y + I+ K G+ + NIL++ + A +
Sbjct: 119 VFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFE 178
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE------------------------- 257
++ C+P++ T+ L+ LC+ G E+AF +
Sbjct: 179 IMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKA 238
Query: 258 -----------RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+ME G D + +N +I GL K G +E +K+L+ M K C P +Y
Sbjct: 239 KRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTY 298
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ L A+EL M P+ V Y LIHG +++ + +MV+
Sbjct: 299 GILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE 358
Query: 367 QGFVP 371
G+ P
Sbjct: 359 AGYRP 363
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 1/261 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++IN L +++ +EK+ D Y + I G + +A+
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAV 598
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L + S V + + L ++ + G DA ++ GL
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-IDAD 267
+ LE A DE + +P V TY+ L+ LC GNV+EAF E M + G +
Sbjct: 659 IKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGS 718
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+ ++ LI G K KV+ +KL E M +G P + + + GL+ + +A+EL+
Sbjct: 719 VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQ 778
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M P ++ ++ GL
Sbjct: 779 EMAAGGSPPHAATFTAILDGL 799
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 38/216 (17%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q R+ P+ A Y IIN L + K K+E C+F D
Sbjct: 635 LFQEMVRQGGAPDAAAYCCIINGLIKVK------------KLEDACKFFD---------- 672
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
M G+ K P+V T+ ++ L A E + S G +
Sbjct: 673 -EMIGKGQK--------------PTVATYTALVQALCHAGNVDEAFHRFESMLARGELVG 717
Query: 198 ACCL-NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ + + L+ G C+ ++AA + ++ + P T ++L GL G E+A LL
Sbjct: 718 SVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELL 777
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ M + G TF ++ GLRK + + +KL++
Sbjct: 778 QEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQ 813
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 8/298 (2%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
++P++ + ++N + + DI+ + +EK D + YN + G K
Sbjct: 259 FSPDQVTFNSLVNGFCRIGNVNDALDIVDFM-IEKGFD-PDVYTYNSLISGMCKLGEFEK 316
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNI 203
AIE L M C P+ T+N +++ L EI+ A L G+ D C N
Sbjct: 317 AIEILQQMILRECSPNTVTYNTLISALCKEN---EIEAATDLARILVSKGLLPDVCTFNT 373
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++GLC + N + A + +E + C+P+ TYS L+ LC + ++EA LL+ MES G
Sbjct: 374 LIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSG 433
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ V +N LI GL K ++E+ ++ ++M+ G +S +Y ++ GL KR EA
Sbjct: 434 CARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEAS 493
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+L+ +MI E + P +Y L+ C +E +++ M G P + + ++G
Sbjct: 494 QLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIG 551
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 145/286 (50%), Gaps = 5/286 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +I L +K D ++ + +K K C+ D F Y+++ R+ +A+
Sbjct: 366 PDVCTFNTLIQGLCLSKNQDIAMEMFEEMK-NKGCK-PDEFTYSILIDSLCYERRLKEAL 423
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +M S C + +N +++ L ++ + + I+ LGV + N L+ GL
Sbjct: 424 MLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGL 483
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+N +E A ++D+ + +P+ TY++L+ C G++E+A +++ M S G + D
Sbjct: 484 CKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDI 543
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+ LI GL + G+V+ KLL ++ KG +Y V+ L +KR E L
Sbjct: 544 FTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFRE 603
Query: 329 MICERMSPSFVSYKKLIHGLCN--QKLVEDVDWVLKKMVQQGFVPR 372
M+ + P +++K + GLCN + E +D+ + +M+++G +P
Sbjct: 604 MMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTV-EMLEKGILPE 648
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 150/335 (44%), Gaps = 43/335 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PNE L +L Q+ FD+I +++++K + F +I+ + N I +
Sbjct: 57 PNETLLL----QLTQSSSFDSITTLLKQLKSSGSIPNATTF-ATLIQSFTNFH-EIENLL 110
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L + + P +N+ LN LV ++ +++ G+ +D N+L+K L
Sbjct: 111 KILENELGFK--PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKAL 168
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM---------------------------- 240
C+ L A +L+E +P+ T++TLM
Sbjct: 169 CKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTN 228
Query: 241 -------HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+G C++G VEEA + + EG D VTFN L++G + G V + + +++
Sbjct: 229 VSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDF 288
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M KG P+ +Y ++ G+ F +A E++ +MI SP+ V+Y LI LC +
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENE 348
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
+E + + +V +G +P + + ++ + K+
Sbjct: 349 IEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKN 383
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 152/314 (48%), Gaps = 11/314 (3%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
+++ F+N + +++ +L + P+ Y + +N L + + +E + ++ E
Sbjct: 96 LIQSFTNFHEIENLLKIL---ENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNE 152
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+ D +NV+ A ++ AI L +M ++ P TF ++ + G
Sbjct: 153 GIVL--DVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEE---G 207
Query: 181 EIQGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
++ G ++ G + + +L+ G C+ G +E A + E ++ P+ T++
Sbjct: 208 DLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFN 267
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
+L++G C GNV +A +++ M +G D D T+N LISG+ K G+ E+ +++L++M +
Sbjct: 268 SLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILR 327
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
C PN+ +Y ++ L + A +L ++ + + P ++ LI GLC K +
Sbjct: 328 ECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIA 387
Query: 358 DWVLKKMVQQGFVP 371
+ ++M +G P
Sbjct: 388 MEMFEEMKNKGCKP 401
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 35/258 (13%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G ++ A++ M Y C + + +++N E ++ G D
Sbjct: 207 GDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTF 266
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C GN+ A ++D ++ +P+V TY++L+ G+C+ G E+A +L++M
Sbjct: 267 NSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMIL 326
Query: 262 EGIDADTVTFNILISGLRKQGKVEE----------------------------------- 286
+TVT+N LIS L K+ ++E
Sbjct: 327 RECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDI 386
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
M++ E MK KGC P+ +Y ++ L ++R EA L+ M + + V Y LI
Sbjct: 387 AMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLID 446
Query: 347 GLCNQKLVEDVDWVLKKM 364
GLC + +ED + + +M
Sbjct: 447 GLCKSRRIEDAEEIFDQM 464
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 135/266 (50%), Gaps = 4/266 (1%)
Query: 122 LCR--FSDGFFYNVIKIYGNMAGR-ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
LCR D YN++ + GR +A+E + M + C P+ T+N++++ +
Sbjct: 190 LCRGCAPDVVTYNIL-LQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGD 248
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ + + S G + + N +LKG C A +LDE ++NC PN T +
Sbjct: 249 VDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNV 308
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
+++ LC KG +++ LE+M G A+ VT+N +ISG+ +QG V+ ++LL M+ G
Sbjct: 309 IINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFG 368
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C P+ +Y VL GL R+ +A+EL+ +M P ++ +I C + L+
Sbjct: 369 CKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAF 428
Query: 359 WVLKKMVQQGFVPRMGMWREIVGCVT 384
V K+M ++G P + I+G +T
Sbjct: 429 EVFKQMPEKGCNPNSTTYSTIIGGLT 454
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 142/288 (49%), Gaps = 4/288 (1%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
VLK F ++ + +L++ R++ PNEA +IIN L + + ++ K+
Sbjct: 274 VLKGFCSIERWVDADEILDEMV-RENCPPNEATLNVIINTLCRKGLLQKVTLYLE--KMS 330
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
K ++ YN + G + A+E L +M S+ C P + T+N VL L SA +
Sbjct: 331 KHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWE 390
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ + + ++ D N ++ C+ G + AF V + P++ C PN TYST++
Sbjct: 391 DAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTII 450
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
GL + G +E+A LL M ++G + D + + +L L K+ K+EE ++++ +++ G
Sbjct: 451 GGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGIS 509
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
P + Y VL GL + A +++ M+ P +Y LI GL
Sbjct: 510 PQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGL 557
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 142/317 (44%), Gaps = 36/317 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +II+ + + D +++ + + C+ + + V+K + ++ R A
Sbjct: 231 PNNVTYNVIIDAMCREGDVDQARELLNSLP-SRGCKPNTVNYNTVLKGFCSIE-RWVDAD 288
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M NC P+ T N+++N L L ++ +K G + N ++ G+
Sbjct: 289 EILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGM 348
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
CE GN+++A +L C+P++ TY+T++ GLC E+A L+ +M D
Sbjct: 349 CEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDN 408
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG- 327
TFN +IS ++G + + ++ ++M KGC PNS +Y ++ GL + +A EL+
Sbjct: 409 STFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNE 468
Query: 328 ------------RMICERM---------------------SPSFVSYKKLIHGLCNQKLV 354
R++ E + SP V Y ++ GLC
Sbjct: 469 MANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKT 528
Query: 355 EDVDWVLKKMVQQGFVP 371
+ VL MV G +P
Sbjct: 529 DYAIDVLADMVSCGCMP 545
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 98/179 (54%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ LCE G + A VLD + C P+V TY+ L+ C+ +A L++ M +
Sbjct: 167 NPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRA 226
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EG + + VT+N++I + ++G V++ +LL + +GC PN+ +Y VL G +R+ +
Sbjct: 227 EGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVD 286
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E++ M+ E P+ + +I+ LC + L++ V L+KM + G + + ++
Sbjct: 287 ADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVI 345
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 133/281 (47%), Gaps = 2/281 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +++ + + + +++ ++ E C + YNVI G + +A
Sbjct: 196 PDVVTYNILLQAACKGRGYRQALELIDFMRAEG-CE-PNNVTYNVIIDAMCREGDVDQAR 253
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +PS C P+ +N VL S + + + I + + LN+++ L
Sbjct: 254 ELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTL 313
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G L+ L++ K C NV TY+ ++ G+CE+GNV+ A LL M+S G D
Sbjct: 314 CRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDI 373
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N ++ GL + E+ +L+ +M P+++++ ++ K +A E+ +
Sbjct: 374 VTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQ 433
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
M + +P+ +Y +I GL +E +L +M +GF
Sbjct: 434 MPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGF 474
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G E A L+ G C G LE A V+ P + ++ L+H LCE+G V +A
Sbjct: 123 GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADA 182
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+L+ M G D VT+NIL+ K + ++L++ M+ +GC PN+ +Y ++
Sbjct: 183 LVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDA 242
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+ + +A+EL+ + P+ V+Y ++ G C+ + D D +L +MV++ P
Sbjct: 243 MCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPN 302
Query: 373 MGMWREIV 380
I+
Sbjct: 303 EATLNVII 310
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L L G+L+AA ++ P+ P+V + L+ LC +G +A ++E + G
Sbjct: 71 LSALIHRGDLDAALRLVGSSPR---PPDVPLANRLVRDLCRRGRPADAARVVE---ACGP 124
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+A T+ L+ G + G +E+ +++ M ++ ++ +++ L ++ R +A
Sbjct: 125 EATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALV 184
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ M+C +P V+Y L+ C + ++ M +G P
Sbjct: 185 VLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEP 231
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 2/269 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ AL+T ++ L +AKR ++ ++ EK D YN + AG +A+
Sbjct: 223 PDRALHTAMVRTLLKAKRVKEAREVFGQM--EKCGFPPDAIAYNTMIDGLAKAGHAQEAL 280
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M + C P+ T+ +++N L A + ++ A G ++ L+ G
Sbjct: 281 KVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGF 340
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
++G ++ A + DE + P+V T++ ++ GLC+ GN E+A E M G +
Sbjct: 341 AKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNV 400
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ +I GL K G+V ++++ M GC+P+S +Y +L G R EA +L+
Sbjct: 401 VTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDE 460
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDV 357
+ SP+ Y L+ GLC+ VE+
Sbjct: 461 LDKCSSSPNLQLYSSLVKGLCDGGSVENT 489
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 9/302 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R PN YT II L++ R IM+ + + C F D Y + GR
Sbjct: 393 RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM-IAHGC-FPDSVTYICLLDGFCKLGR 450
Query: 144 ISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIY--TSAAKLGVEIDACC 200
+ +A + L ++ + P+++ ++ LV L + + ++ + AA ++ CC
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC 510
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE--KGNVEEAFGLLER 258
I+ GLC+ G L+ A + + C+P+ TY+ L++GLC + VE AF LL
Sbjct: 511 SIIV--GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHD 568
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
+E G D VT+ L GL K G+V+ +K+LE +G + +Y + GL + +
Sbjct: 569 LEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
A L M+ + +P +Y +I+GL K +ED +M+ +G P + +
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTA 688
Query: 379 IV 380
+V
Sbjct: 689 LV 690
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 9/287 (3%)
Query: 89 PNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PN + ++I A+ +R D +IM+R K C+ F ++ AG
Sbjct: 152 PNTFSFNILIRSFARTRRADDAVTCFEIMKR----KRCKPDLHTFLILVDCLCK-AGMDE 206
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVL-NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA E +M + P + + + L+ AK E + ++ K G DA N +
Sbjct: 207 KAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTM 266
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GL + G+ + A VLD + C P TY L++ LC+ G +E A L M + G
Sbjct: 267 IDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGF 326
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
++V + LI G K G+++E L + M G P+ ++ ++ GL F +A +
Sbjct: 327 RPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ P+ V+Y +I GL V + ++K M+ G P
Sbjct: 387 SFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFP 433
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 144/353 (40%), Gaps = 68/353 (19%)
Query: 87 YNPNEALYTLIINKLAQAKR-------FDAIED-------IMQRIKVEKLCRFSDGFFYN 132
+ PN +YT +I+ A++ R FD + + I + ++ LC+
Sbjct: 326 FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCK-------- 377
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+G +A ++ +M C P+V T+ ++ L I
Sbjct: 378 --------SGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAH 429
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE-- 250
G D+ LL G C+ G L+ A +LDE K + PN++ YS+L+ GLC+ G+VE
Sbjct: 430 GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENT 489
Query: 251 ----------------------------------EAFGLLERMESEGIDADTVTFNILIS 276
EA + +RM SEG D T+NILI+
Sbjct: 490 LDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN 549
Query: 277 GL--RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
GL ++ +VE LL ++ G P++ +Y + GL A +++
Sbjct: 550 GLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGW 609
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
+ V+Y L GLC Q V+ + ++MV+QG P + I+ + GK
Sbjct: 610 NADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGK 662
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 9/285 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +++ + R D ++ +++K + Y+ + G + +
Sbjct: 433 PDSVTYICLLDGFCKLGRLDEAAQLLD--ELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490
Query: 149 ETLFDM---PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+ LF+ + N P + ++++ L + +L E I+ G + DA NIL+
Sbjct: 491 DDLFEQSKAAAENLDPGL-CCSIIVGLCKTGRL-DEACRIFQRMVSEGCKPDATTYNILI 548
Query: 206 KGLCEN--GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
GLC + +E AF +L + P+ TY+ L GLC+ G V+ A +LE S G
Sbjct: 549 NGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+AD V + L +GL QG+V+ + L + M +G P++A+Y ++ GL+ K+ +A
Sbjct: 609 WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDAC 668
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ MI + P+ +Y L+ LC+ V++ + M+ +G
Sbjct: 669 KFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARG 713
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 128/289 (44%), Gaps = 8/289 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+PN LY+ ++ L + ++D+ ++ K G ++I + GR+ +
Sbjct: 467 SPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAE-NLDPGLCCSII-VGLCKTGRLDE 524
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNI 203
A M S C P T+N+++N L ++ ++ + L G DA
Sbjct: 525 ACRIFQRMVSEGCKPDATTYNILINGLCRSR-ENRVERAFALLHDLEMVGYLPDAVTYTP 583
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L GLC+ G ++ A +L+E + +V Y+ L GLC +G V+ A L + M +G
Sbjct: 584 LCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQG 643
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA- 322
D + +I+GL K K+E+ K + M GKG P A+Y ++ L EA
Sbjct: 644 GAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAF 703
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G + + S + Y LIHG C V+ + + M+ +G VP
Sbjct: 704 HRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 102/245 (41%), Gaps = 36/245 (14%)
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
V T+N ++NLLV+ K Y + I+ K G+ + NIL++ + A +
Sbjct: 119 VFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFE 178
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE------------------------- 257
++ C+P++ T+ L+ LC+ G E+AF +
Sbjct: 179 IMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKA 238
Query: 258 -----------RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+ME G D + +N +I GL K G +E +K+L+ M K C P +Y
Sbjct: 239 KRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTY 298
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ L A+EL M P+ V Y LIHG +++ + +MV+
Sbjct: 299 GILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE 358
Query: 367 QGFVP 371
G+ P
Sbjct: 359 AGYRP 363
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 1/261 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++IN L +++ +E + D Y + I G + +A+
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAV 598
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L + S V + + L ++ + G DA ++ GL
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-IDAD 267
+ LE A DE + +P V TY+ L+ LC GNV+EAF E M + G +
Sbjct: 659 IKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGS 718
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+ ++ LI G K KV+ +KL E M +G P + + + GL+ + +A+EL+
Sbjct: 719 VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQ 778
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M P ++ ++ GL
Sbjct: 779 EMAAGGSPPHAATFTAILDGL 799
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 88/219 (40%), Gaps = 44/219 (20%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q R+ P+ A Y IIN L + K K+E C+F D
Sbjct: 635 LFQEMVRQGGAPDAAAYCCIINGLIKGK------------KLEDACKFFD---------- 672
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA----KLYGEIQGIYTSAAKLG 193
M G+ K P+V T+ ++ L A + + +G+ +G
Sbjct: 673 -EMIGKGQK--------------PTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVG 717
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ + L+ G C+ ++AA + ++ + P T ++L GL G E+A
Sbjct: 718 SVM---IYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQ 774
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
LL+ M + G TF ++ GLRK + + +KL++
Sbjct: 775 ELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQ 813
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 149/336 (44%), Gaps = 12/336 (3%)
Query: 40 HQDSDHHAYKLNHKDWLSPTE-----VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALY 94
H D+ ++ H+D + PT + L +++L + R P+ LY
Sbjct: 155 HADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMA-RHGCVPDAVLY 213
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM 154
+I+ L ++ + + C F +V++ + GR+ +A + M
Sbjct: 214 QTVIHALCDQGGVTEAATLLNEMLLMG-CAADVNTFDDVVRGMCGL-GRVREAARLVDRM 271
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
+ C P V T+ +L L + E + + +L V + N ++ G G L
Sbjct: 272 MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVL----FNTVIGGCLAEGKL 327
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
A + + + C+P+ TYS LMHGLC+ G + A LL ME +G + VT+ I+
Sbjct: 328 AEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIV 387
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
+ K G ++ LLE M KG NS Y ++Y L R EA L+ M +
Sbjct: 388 LHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGC 447
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+P SY +I+ LCN + +E+ + + + ++++G V
Sbjct: 448 NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 483
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 147/291 (50%), Gaps = 3/291 (1%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
S + +L + K K + PN YT++++ + +D +++ + + L S G+
Sbjct: 364 SAVRLLREMEK-KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 422
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ + + GR+ +A+ + +M S C P + ++N ++ L + + E + ++ + +
Sbjct: 423 IYALCKD--GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GV + N ++ L +G + A + E C +V +Y+ L+ +C+ GNV+ +
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LLE M +GI + V++NILIS L K+ +V + ++L ++M +G P+ +Y ++ G
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
L A L+ ++ E + P ++Y LI C +L++D +L +
Sbjct: 601 LCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 7/298 (2%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAK-RFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ +L+Q +R P+ Y ++++ LA+A DA+ + + +++ + F +
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTT--FTFG 179
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
V GR +A+ L M + C P + V++ L E + +
Sbjct: 180 VAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM 239
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D + +++G+C G + A ++D + C P V TY L+ GLC +EA
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA 299
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+L R+ + + V FN +I G +GK+ E +L E M KGC P++ +Y +++G
Sbjct: 300 RAMLGRVP----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHG 355
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
L R A L+ M + +P+ V+Y ++H C + +D +L++M +G
Sbjct: 356 LCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLT 413
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 139/277 (50%), Gaps = 3/277 (1%)
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM 154
T+I LA+ K +A E + K C+ D Y+++ GRI A+ L +M
Sbjct: 316 TVIGGCLAEGKLAEATE--LYETMGLKGCQ-PDAHTYSILMHGLCKLGRIGSAVRLLREM 372
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
P+V T+ +VL+ ++ + + + + G+ +++ N ++ LC++G +
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A ++ E Q C P++ +Y+T+++ LC +EEA + E + EG+ A+ +T+N +
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I L + G+ ++ ++L + M GC + SY ++ + + L+ M + +
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P+ VSY LI LC ++ V D + K+M+ QG P
Sbjct: 553 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAP 589
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 145 SKAIETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA-KLGVEIDACCLN 202
+A+ L +P + PS +++N+VL++L A + + +Y + V
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFG 179
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+ + LC G + A +L + C P+ Y T++H LC++G V EA LL M
Sbjct: 180 VAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM 239
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G AD TF+ ++ G+ G+V E +L++RM KGC P +Y +L GL ++ EA
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA 299
Query: 323 KELVGRM--------------------------ICERMS-----PSFVSYKKLIHGLCNQ 351
+ ++GR+ + E M P +Y L+HGLC
Sbjct: 300 RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKL 359
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
+ +L++M ++GF P
Sbjct: 360 GRIGSAVRLLREMEKKGFAP 379
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 2/222 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q + + NP+ Y II L ++ + E + + + E + ++G YN I
Sbjct: 438 LIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV--VANGITYNTIIHA 495
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
GR A+ +M + C V ++N ++ + + A+ G++ +
Sbjct: 496 LLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPN 555
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
NIL+ LC+ + A + + Q P++ TY+TL++GLC+ G + A LLE
Sbjct: 556 NVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLE 615
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
++ +E + D +T+NILIS K +++ LL R C
Sbjct: 616 KLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 657
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 154/324 (47%), Gaps = 9/324 (2%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
R I ++ ++ S R PN +Y+ II+ L + K + D+ + ++ F +
Sbjct: 132 RCAIKLLRMIEDRSTR----PNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREI--FPNV 185
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
YN + +AG++ A L +M N P V TF+++++ L K + I+ +
Sbjct: 186 ITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDAL--CKEGKNAKQIFHA 243
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
++GV + NI++ GLC+ ++ A +L E +N P+ TY++L+ GLC+ G
Sbjct: 244 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ A L+ M G AD VT+ L+ L K +++ L +MK +G P +Y
Sbjct: 304 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 363
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ GL R A+EL ++ + +Y +I GLC + + ++ + KM G
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 423
Query: 369 FVPRMGMWREIVGCVTFGKDNRNR 392
+P + EI+ F KD ++
Sbjct: 424 CIPN-AVTFEIIIRSLFEKDENDK 446
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 14/274 (5%)
Query: 118 KVEKLCRFSDGFFYNVIKI----YGNMAGRISK------AIETLFDMPSYNCWPSVKTFN 167
+V+KL F D + YG + + K AI+ L + + P+V ++
Sbjct: 95 EVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYS 154
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+++ L KL E +Y+ + + N L+ C G L AF +L E +
Sbjct: 155 AIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILK 214
Query: 228 NCEPNVRTYSTLMHGLCEKG-NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
N P+V T+S L+ LC++G N ++ F + +M G++ + ++NI+I+GL K +V+E
Sbjct: 215 NINPDVYTFSILIDALCKEGKNAKQIFHAMVQM---GVNPNVYSYNIMINGLCKCKRVDE 271
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
M LL M K P++ +Y ++ GL R A L+ M V+Y L+
Sbjct: 272 AMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLD 331
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LC + ++ + KM ++G P M + ++
Sbjct: 332 ALCKNQNLDKATALFMKMKERGIQPTMYTYTALI 365
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 121/247 (48%), Gaps = 6/247 (2%)
Query: 85 KDYNPNEALYTLIINKLA-QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
K+ NP+ ++++I+ L + K I M ++ V + + YN++ R
Sbjct: 214 KNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVN-----PNVYSYNIMINGLCKCKR 268
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+ L +M N P T+N +++ L + + G D
Sbjct: 269 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 328
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL LC+N NL+ A + + ++ +P + TY+ L+ GLC+ G ++ A L + + +G
Sbjct: 329 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 388
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D T+ ++ISGL K+G +E + + +M+ GC PN+ +++ ++ L +K +A+
Sbjct: 389 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAE 448
Query: 324 ELVGRMI 330
+L+ MI
Sbjct: 449 KLLHEMI 455
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%)
Query: 166 FNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP 225
FN +L LV K Y + + G+E + L+IL+ C G + +F +L +
Sbjct: 13 FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
K PN T++TLM GLC KG V++ +++ ++ + V++ L++GL K G+
Sbjct: 73 KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
+KLL ++ + PN Y ++ GL K EA +L M + P+ ++Y LI
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI 192
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVP 371
C + +L +M+ + P
Sbjct: 193 CAFCLAGQLMGAFSLLHEMILKNINP 218
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 2/211 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NPN Y ++IN L + KR D ++++ + + + D YN + +GRI+ A
Sbjct: 250 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNM--VPDTVTYNSLIDGLCKSGRITSA 307
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ + +M V T+ +L+ L + + ++ + G++ L+ G
Sbjct: 308 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG 367
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G L+ A + + C +V TY+ ++ GLC++G +EA + +ME G +
Sbjct: 368 LCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPN 427
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
VTF I+I L ++ + ++ KLL M KG
Sbjct: 428 AVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
KLG + L+KGLC G ++ + D+ Q + N +Y TL++GLC+ G
Sbjct: 73 KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A LL +E + V ++ +I GL K V E L M + +PN +Y ++
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI 192
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ A L+ MI + ++P ++ LI LC + ++ + MVQ G
Sbjct: 193 CAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVN 250
Query: 371 PRM 373
P +
Sbjct: 251 PNV 253
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 61/126 (48%)
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L ++M+ +GI+ + VT +ILI+ G++ LL ++ G PN+ ++ ++ GL
Sbjct: 32 LSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLC 91
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
K + +++ + + VSY L++GLC +L+ + + P +
Sbjct: 92 LKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVV 151
Query: 375 MWREIV 380
M+ I+
Sbjct: 152 MYSAII 157
>gi|297810021|ref|XP_002872894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318731|gb|EFH49153.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1162
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 164/335 (48%), Gaps = 22/335 (6%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
SPT V K+ ++ DP+ + + S++ ++ +++ Y ++I KL +A+ F+ I+D++ +
Sbjct: 52 SPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSQSSYLILILKLGRARYFNLIDDVLAK 111
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+ + F Y +IK+Y A K + T + M +N P K N +L +LVS
Sbjct: 112 HRSSGYPLTGEIFTY-LIKVYAE-AKIPEKVLRTFYKMLEFNFTPQPKHLNRILEVLVSH 169
Query: 177 KLYGEIQ-GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ Y + ++ S+ GV + NIL++ C N +L A+ + + +++ P+V +
Sbjct: 170 RGYLQKAFELFKSSRLHGVMPNTRSYNILMQAFCLNDDLSIAYQLFGKMLERDVVPDVES 229
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGI-------DADTVTFNILISGLRKQGKVEEGM 288
Y L+ G C KG V A LLE M ++G + D V +N +I G ++ + +
Sbjct: 230 YKILIKGFCRKGQVNGAMELLEDMLNKGFVPDRLSCNPDLVHYNTIILGFCREDRAMDAR 289
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
K+L+ M ++ GL D+ F E K+ + MI + SP F L+ G
Sbjct: 290 KVLDDM------------LTLIGGLCDQGMFDEGKKYLQEMISKGFSPHFSVSNCLVKGF 337
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
C+ VE+ V++ +++ G + W I+ +
Sbjct: 338 CSFGKVEEACDVVEVVMKNGEILHSDTWEMIIPLI 372
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 136/268 (50%), Gaps = 9/268 (3%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKAIETL 151
+Y +I+ L ++ R DA + + + + L D + + +YG +AGR S+A
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLSKGLQ--PDHVTFTSL-VYGLGVAGRASEARRIF 287
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+ C V +N++++ L +K E I+ + G+ D N L+ GLC++
Sbjct: 288 QEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKS 347
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G + AF +L + + C P+V Y+TL+ GL + G VEEA LL M+S G + D VT+
Sbjct: 348 GRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTY 407
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N LI K G++E+ ++L E + KG + N+ +Y +L GL R EA +L M
Sbjct: 408 NTLIDESCKGGRIEDALRLFEEISAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQ 466
Query: 332 ER----MSPSFVSYKKLIHGLCNQKLVE 355
E + P FV+Y L++G L E
Sbjct: 467 ETVDGVIDPDFVTYTTLLNGARQAGLSE 494
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 35/275 (12%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG KA+ M P TFN+++N AK + ++ +
Sbjct: 102 AGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVIT 161
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+IL+ +C+ G +E A V + + C PN+ TY++++ GL + G+V++AF L E M
Sbjct: 162 YSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMT 221
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL------- 313
SEG+ A V +N LI GL + G+ + KL M KG P+ ++ ++YGL
Sbjct: 222 SEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRAS 281
Query: 314 ---------------LD-------------KKRFPEAKELVGRMICERMSPSFVSYKKLI 345
LD KR EA E+ G + + + P ++ L+
Sbjct: 282 EARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALM 341
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
GLC + D +L M + G P + ++ ++
Sbjct: 342 DGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLI 376
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + K++E L M + C + +N +++ V A + +Y + G+ D
Sbjct: 67 AGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYT 126
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ + +++ + + +E QNC PNV TYS L+ +C+ G VE+A + M+
Sbjct: 127 FNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMK 186
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S G + T+ +I GL K G V++ L E M +G Y +++GL R
Sbjct: 187 SRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRAD 246
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGL 348
A +L M+ + + P V++ L++GL
Sbjct: 247 AAAKLFREMLSKGLQPDHVTFTSLVYGL 274
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 144/334 (43%), Gaps = 41/334 (12%)
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
++V V+ Q R P+ + +++N +AKR D++ + + ++ + +
Sbjct: 108 ALAVYRVMGQSGLR----PDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCS--PNVIT 161
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN------------------- 171
Y+++ G + KA++ DM S C P++ T+ +++
Sbjct: 162 YSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMT 221
Query: 172 ---LLVSAKLYGEI------QGIYTSAAKL-------GVEIDACCLNILLKGLCENGNLE 215
L+ + +Y + G +AAKL G++ D L+ GL G
Sbjct: 222 SEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRAS 281
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A + E C +V Y+ L+ LC+ ++EA+ + +E +G+ D TFN L+
Sbjct: 282 EARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALM 341
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
GL K G++ + LL MK GC P+ Y ++ GL R EA +L+ M
Sbjct: 342 DGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYE 401
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
P V+Y LI C +ED + +++ +GF
Sbjct: 402 PDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF 435
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%)
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+ A N L+ + G + A V + P+ T++ LM+ + V+ + L
Sbjct: 87 LTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKL 146
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
E M+++ + +T++ILI + K G VE+ +K+ MK +GC PN +Y ++ GL
Sbjct: 147 FEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGK 206
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A L M E + + V Y LIHGL + + ++M+ +G P
Sbjct: 207 SGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQP 262
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 65/177 (36%), Gaps = 35/177 (19%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L +G G LE + L C Y++L+ + G ++A + M G
Sbjct: 60 LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ DT TFN+L++ +K +V+ KL E M+ + C
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNC------------------------ 155
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
SP+ ++Y LI +C VE V M +G P + + ++
Sbjct: 156 -----------SPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMI 201
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 137/274 (50%), Gaps = 3/274 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K P+ + Y L+++ L R +D+++ ++ + + D YN++ + G
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI--IPDAITYNILINGYSRCGN 363
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A + +M S P+ T+ ++ +L E ++ GV D N
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 423
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G C NGN+E AF +L E +++ P+ T++TLM G C +G VEEA LL+ M+ G
Sbjct: 424 MIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG 483
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +++N LISG ++G +++ + + M G P +Y ++ L + A+
Sbjct: 484 IKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 543
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCN-QKLVED 356
EL+ M+ + +SP +Y LI G+ N LVED
Sbjct: 544 ELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVED 577
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 143/323 (44%), Gaps = 39/323 (12%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGR 143
K P+ Y +I+ + + R + + K+ ++ + YN +I Y N G
Sbjct: 237 KGIEPDSYTYGSLISGMCKEGRLEEASGLFD--KMVEIGLVPNAVTYNTLIDGYCN-KGD 293
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A +M PSV T+NL+++ L GE + K G+ DA NI
Sbjct: 294 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 353
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH---------------------- 241
L+ G GN + AF + +E + EP TY++L++
Sbjct: 354 LINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 413
Query: 242 -------------GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
G C GNVE AF LL+ M+ + + D VTFN L+ G ++GKVEE
Sbjct: 414 VSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 473
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
LL+ MK +G P+ SY ++ G + +A + M+ +P+ ++Y LI L
Sbjct: 474 MLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCL 533
Query: 349 CNQKLVEDVDWVLKKMVQQGFVP 371
C + + + +LK+MV +G P
Sbjct: 534 CKNQEGDLAEELLKEMVNKGISP 556
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 119/242 (49%), Gaps = 2/242 (0%)
Query: 131 YNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN I I+G + G I A L M P T+ +++ + E G++
Sbjct: 211 YNTI-IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM 269
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
++G+ +A N L+ G C G+LE AF DE K+ P+V TY+ L+H L +G +
Sbjct: 270 VEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRM 329
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EA +++ M +GI D +T+NILI+G + G + L M KG P +Y +
Sbjct: 330 GEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSL 389
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+Y L + R EA +L +++ + +SP + + +I G C VE +LK+M ++
Sbjct: 390 IYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSV 449
Query: 370 VP 371
P
Sbjct: 450 PP 451
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
S+++ L E G +++A + ME G + V++N +I G +G +E ++L+ M+
Sbjct: 178 SSIVFDLLE-GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRV 236
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
KG P+S +Y ++ G+ + R EA L +M+ + P+ V+Y LI G CN+ +E
Sbjct: 237 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 296
Query: 357 VDWVLKKMVQQGFVPRMGMWREIV 380
+MV++G +P + + +V
Sbjct: 297 AFSYRDEMVKKGIMPSVSTYNLLV 320
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN +Y II+ L ++K+ D D++ R++ + + D YN + +GR S
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI--GPDVVTYNSLISGLCSSGRWSD 239
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A + M +P V TFN +++ V E + Y + ++ D ++L+
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC L+ A + + C P+V TYS L++G C+ VE L M G+
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+TVT+ ILI G + GK+ ++ RM G +PN +Y +L+GL D + +A ++
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M M V+Y +I G+C V D + + QG +P
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T N++LN KLG E LL G C + A Y+ D+
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+PNV Y+T++ GLC+ V+ A LL RME +GI D VT+N LISGL G+
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ +++ M + YP+ ++ ++ + + R EA+E MI + P V+Y L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I+GLC +++ + + MV +G P
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFP 324
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 137/286 (47%), Gaps = 10/286 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKV----EKLCRFSDGFFYNVIKIYGNMAGRI 144
P+ A ++ +++ +++ K++D + + +++++ LC N++ ++
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC------NILLNCFCRCSQL 132
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S A+ L M PS+ TF +LN + ++ +G + + N +
Sbjct: 133 SLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI 192
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC++ ++ A +L+ K P+V TY++L+ GLC G +A ++ M I
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D TFN LI K+G+V E + E M + P+ +Y ++YGL R EA+E
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ G M+ + P V+Y LI+G C K VE + +M Q+G V
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 123/249 (49%), Gaps = 5/249 (2%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NM 140
+KR+ Y P+ + +I+ + R E+ + + L D Y+++ IYG M
Sbjct: 248 TKREIY-PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL--DPDIVTYSLL-IYGLCM 303
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
R+ +A E M S C+P V T+++++N +K ++ ++ GV +
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
IL++G C G L A + PN+ TY+ L+HGLC+ G +E+A +L M+
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+DAD VT+NI+I G+ K G+V + + + +G P+ +Y ++ GL K
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483
Query: 321 EAKELVGRM 329
EA L +M
Sbjct: 484 EADALFRKM 492
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A+ M P+V +N +++ L +K + K G+ D N
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC +G A ++ K+ P+V T++ L+ ++G V EA E M
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+D D VT+++LI GL +++E ++ M KGC+P+ +Y ++ G K+
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+L M + + V+Y LI G C + + + ++MV G P +
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 2/219 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ +P+ Y+L+I L R D E+ M V K C F D Y+++ + +
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEE-MFGFMVSKGC-FPDVVTYSILINGYCKSKK 341
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ ++ +M + T+ +++ A + I+ GV + N+
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC+NG +E A +L + K + ++ TY+ ++ G+C+ G V +A+ + + +G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
+ D T+ ++ GL K+G E L +MK G PN
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P++ +S L+ + + + L E+M+ GI + T NIL++ + ++ +
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L +M G P+ ++ +L G R +A + +M+ P+ V Y +I GLC
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
K V++ +L +M + G P + + ++
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 141/295 (47%), Gaps = 10/295 (3%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R P + +I+ + K + + ++Q++ + +D YN + AGR
Sbjct: 145 RAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGV--KADVVTYNTLMDGLCKAGR 202
Query: 144 ISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ +A + L M + C P V ++ V L S K+ Q + + + N
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQ-VLEQMRDSHHDPNVVTYN 261
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+L GLC++G ++ A ++++ + C NV YST++ GLC+ G +EA ++E M
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D VT++ L++GL K GK+EE ++ + M +GC PN+ +Y +++GL R E
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAE 381
Query: 322 AKELVGRMICERMS-----PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A+ +V M PS +Y LI GLC ++D ++M QG P
Sbjct: 382 AERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDP 436
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 141/289 (48%), Gaps = 14/289 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG- 142
R PN + ++N ++ R E +++ + + NV+ G + G
Sbjct: 3 RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDI-------QPNVVSYNGLLEGL 55
Query: 143 ----RISKAIETLFDMPSYN--CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
R +A E + DM S P + T++ +L+ A E + + G+
Sbjct: 56 CKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRP 115
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
DA ++ LC++ L A +L+E + C P + T++TL+ G C + N+E A LL
Sbjct: 116 DALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLL 175
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
++M + G+ AD VT+N L+ GL K G+++E +LLERMK GC P+ +Y +YGL
Sbjct: 176 QKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS 235
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+ +A +++ +M P+ V+Y ++ GLC ++ ++++M
Sbjct: 236 GKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA 284
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 144/317 (45%), Gaps = 2/317 (0%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
FS P +L + R D PN Y ++ L + +R+ E++++ +
Sbjct: 20 FSKQGRPGDCERLLETMAAR-DIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRS 78
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
D Y+ + AG++ ++ E L ++ S P + V+ L + GE
Sbjct: 79 TPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALE 138
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ + G N L+ G C NLE A +L + + +V TY+TLM GLC
Sbjct: 139 LLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLC 198
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ G ++EA LLERM++ G D V ++ + GL K GKV + ++LE+M+ PN
Sbjct: 199 KAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVV 258
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMIC-ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y +L GL + A E++ +M + + V Y ++ GLC ++ V++
Sbjct: 259 TYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318
Query: 364 MVQQGFVPRMGMWREIV 380
M + G P + + +V
Sbjct: 319 MARAGCRPDVVTYSSLV 335
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 6/199 (3%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYN-CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN I +G+I A+E + M S + C +V ++ V++ L E + + +
Sbjct: 260 YNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM 319
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
A+ G D + L+ GLC+ G +E A + E + C+PN TY +L+HGLC G +
Sbjct: 320 ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRL 379
Query: 250 EEAFGLLERMESEG-----IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
EA ++E M S G T+N LI GL K G++++ +K +RM+ +GC P+
Sbjct: 380 AEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGV 439
Query: 305 SYQEVLYGLLDKKRFPEAK 323
SY ++ GL R +A+
Sbjct: 440 SYSTIVEGLARSGRALQAE 458
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 7/224 (3%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL Q + ++PN Y I++ L ++ + D ++M+++ C + + V+
Sbjct: 244 VLEQM-RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDG 302
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ GR +A + M C P V T++ ++N L A E A G +
Sbjct: 303 LCKL-GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKP 361
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQN-----CEPNVRTYSTLMHGLCEKGNVEE 251
+A L+ GLC G L A +++E C P+V TY+ L+ GLC+ G +++
Sbjct: 362 NAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDD 421
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
A +RM S+G D D V+++ ++ GL + G+ + +L ++
Sbjct: 422 ALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 37/264 (14%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M C P+ TFN ++N G+ + + + A ++ + N LL+GLC+
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 214 L-EAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT--- 268
EA V D + P++ TYSTL+ G C+ G VEE+ LL+ + S G+ D
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 269 --------------------------------VTFNILISGLRKQGKVEEGMKLLERMKG 296
+TFN LISG ++ +E LL++M
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
G + +Y ++ GL R EA++L+ RM +P V+Y ++GLC V D
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240
Query: 357 VDWVLKKMVQQGFVPRMGMWREIV 380
VL++M P + + I+
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTIL 264
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 114/230 (49%), Gaps = 4/230 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+I KA T+ +M P V T+N+V++ L A+ + + E D
Sbjct: 24 GKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTY 79
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL GLC+NG + A + P+ TY+TL+ C+ E A+GLL+ M S
Sbjct: 80 NTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMAS 139
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
++ +I+GL K KV++ +L E MK GC P+ +Y +++GL K+R E
Sbjct: 140 RKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHE 199
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
AK+L+ M+ P +++ LI GLC +++ + + M +QG P
Sbjct: 200 AKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAP 249
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 120/268 (44%), Gaps = 6/268 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+D PN Y ++ L + + D + + EKL D F YNV+ A RI
Sbjct: 4 QDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKL--VPDVFTYNVVIDTLCKARRI 61
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S+AIE MP P V T+N +L L + ++ S G+ L
Sbjct: 62 SRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 117
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ C+ E A+ +L + C P V +Y ++++GLC+ V++A+ L E M+ G
Sbjct: 118 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 177
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VT+N LI GL + ++ E LL M P+ ++ ++ GL R EA
Sbjct: 178 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFV 237
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQK 352
L M + +P V++ L+ LC ++
Sbjct: 238 LFQGMAKQGCAPDLVTHTVLVSKLCIRR 265
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 133/344 (38%), Gaps = 38/344 (11%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
T ++ +F + + +L + RK +P Y IIN L + ++ D + + +K
Sbjct: 115 TTLIDVFCKMCQFETAYGLLQLMASRK-CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMK 173
Query: 119 VEKLCRFSDGFFYNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
+ C+ D YN + I+G + R+ +A + L M + P TF ++ L +
Sbjct: 174 LAG-CK-PDRVTYNTL-IHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTD 230
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP------------ 225
E ++ AK G D +L+ LC L A V+ +P
Sbjct: 231 RIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPI 290
Query: 226 ---------------------KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++ PNV TY+ GL + A+ RM +GI
Sbjct: 291 FRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGI 350
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ D V +N+L+ G K +++ K++ M G PN +Y ++ K + E
Sbjct: 351 EPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGE 410
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
L+ M+ P ++ L+ GL V+ L + QG
Sbjct: 411 LLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 4/154 (2%)
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
Q+C+PN +Y L+ LC G +++A + M E + D T+N++I L K ++
Sbjct: 4 QDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISR 63
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
++ E M P+ +Y +L GL R +A L G M ++PS V+Y LI
Sbjct: 64 AIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLID 119
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C E +L+ M + P + + I+
Sbjct: 120 VFCKMCQFETAYGLLQLMASRKCSPTVYSYCSII 153
>gi|26453140|dbj|BAC43646.1| unknown protein [Arabidopsis thaliana]
gi|28950987|gb|AAO63417.1| At1g80150 [Arabidopsis thaliana]
Length = 397
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 36 PSASHQDSDHHAYKLNHKDWLSPTE--VLKIFSNLRDPISVISVLNQYSKRKDYNPNEAL 93
PS++ + + + N L P E L + RDP + ++ + + N
Sbjct: 14 PSSAATGIAYVSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFA 73
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
+ +++LA A R D IED+++ K R +GF +I +YG AG +A++T F+
Sbjct: 74 FEDTVSRLAGAGRLDFIEDLLEHQKTLPQGR-REGFMVRIIMLYGK-AGMTKQALDTFFN 131
Query: 154 MPSYNCWPSVKTFNLVLNLL-VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M Y C SVK+FN L +L + L+ + ++ + +K G++IDA NI +K CE G
Sbjct: 132 MDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELG 191
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
L+ A+ + E K P+V TY+TL+ L + GL + +G + TFN
Sbjct: 192 ILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLIVLKGCKPNLTTFN 251
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV-GRMIC 331
+ I L + + + LL M P+S +Y V+ G RFP+ E V M
Sbjct: 252 VRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFF-LARFPDMAERVYTAMHG 310
Query: 332 ERMSPSFVSYKKLIHGLC 349
+ P+ Y+ +IH LC
Sbjct: 311 KGYKPNLKIYQTMIHYLC 328
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 158/340 (46%), Gaps = 13/340 (3%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + T ++ F + + V Q R + P+ Y+ +I+ L + R D+
Sbjct: 149 DIFTYTTLITGFCKSKKSDDALRVFEQLVAR-GFRPDVVTYSCLIDGLCKEGRLKEAIDL 207
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
R+ C + + ++I + M G++ +A+ L M P V T+ ++N
Sbjct: 208 FGRMIKSGSCMPNTVTYNSLISGFCRM-GKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 266
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ + + G+ D L+ GLC L A ++L E +++C P V
Sbjct: 267 CKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 326
Query: 234 RTYSTLMHGLCEKGNVEEAFG-LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TY+T++ G C +EEA +LE M+ + V+FNI+I GL K + E M+L+E
Sbjct: 327 YTYNTILDGYCRANQLEEARKFMLEEMDCP---PNVVSFNIMIRGLCKVNRSSEAMELVE 383
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS-PSFVSYKKLIHGLCNQ 351
+ + C P+ Y V+ GL +K+ EA + +M+ E P+ ++Y L+ GLCN
Sbjct: 384 EARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNA 443
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRN 391
+++ + +++G VP +G + ++ F K NR+
Sbjct: 444 GMLDRA----RGYIEKGCVPNIGTYNLLID--AFRKANRD 477
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 136/282 (48%), Gaps = 5/282 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
++ PN YT++I+ L + R D E + K+ K C YN + A R
Sbjct: 75 RNLTPNVVTYTVLIDGLCKGGRVD--EAVALLSKMRKKC-VPTAVTYNSLISGLCKAERA 131
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S+A + L +M C P + T+ ++ +K + ++ G D + L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 205 LKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+ GLC+ G L+ A + K +C PN TY++L+ G C G ++EA LLERM G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D VT+ L++G K ++++ LL +M KG P+ ++ ++ GL + R +A
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV-DWVLKKM 364
++G M + SP+ +Y ++ G C +E+ ++L++M
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM 353
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 92/168 (54%), Gaps = 1/168 (0%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++GLC+ LE A L + + P+V TY+ ++H LC + + EA LE M +
Sbjct: 17 LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + VT+ +LI GL K G+V+E + LL +M+ K C P + +Y ++ GL +R EA
Sbjct: 77 LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERASEAY 135
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L+ M+ P +Y LI G C K +D V +++V +GF P
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 149/317 (47%), Gaps = 21/317 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
P+ YT +I ++K+ D + +++ + GF +V+ Y + G
Sbjct: 148 PDIFTYTTLITGFCKSKKSDDALRVFEQL-------VARGFRPDVV-TYSCLIDGLCKEG 199
Query: 143 RISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ +AI+ M S +C P+ T+N +++ E + A+ G D
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G C+ L+ A+ +L++ ++ P+V T+++LM GLC + + +A +L M
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMK-LLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ T+N ++ G + ++EE K +LE M C PN S+ ++ GL R
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD---CPPNVVSFNIMIRGLCKVNRSS 376
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ-GFVPRMGMWREI 379
EA ELV R +P V Y +I GLC +K V++ V +KM+++ G +P + +
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436
Query: 380 V-GCVTFGKDNRNRVYV 395
V G G +R R Y+
Sbjct: 437 VTGLCNAGMLDRARGYI 453
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ LC L A L+E +N PNV TY+ L+ GLC+ G V+EA LL +M +
Sbjct: 52 VIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKC 111
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+N LISGL K + E LLE M GC P+ +Y ++ G K+ +A
Sbjct: 112 VPT-AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDAL 170
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ +++ P V+Y LI GLC + +++ + +M++ G
Sbjct: 171 RVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 25/252 (9%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG----- 142
+P+ YT ++N + R D D++ ++ G +V+ M G
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMT-------RKGLTPDVVTFTSLMDGLCREN 305
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+S A+ L +M +C P+V T+N +L+ A E + ++ + N
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFN 363
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ES 261
I+++GLC+ A +++E ++ C P+V Y+T++ GLC + V+EA + +M E
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG---KGCYPNSASYQEVLYGLLDKKR 318
G +++T++ L++GL G +L+R +G KGC PN +Y ++ R
Sbjct: 424 PGCLPNSITYSTLVTGLCNAG-------MLDRARGYIEKGCVPNIGTYNLLIDAFRKANR 476
Query: 319 FPEAKELVGRMI 330
+A+EL+ M+
Sbjct: 477 DEDARELLDDMV 488
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 3/170 (1%)
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+C + TY++L+ GLC+ +E+A L +M S+G D T+ +I L + ++ E
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
K LE M + PN +Y ++ GL R EA L+ +M ++ P+ V+Y LI
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLIS 123
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRNRVY 394
GLC + + +L++MV G +P + + ++ C + D+ RV+
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 173
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 10/246 (4%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ T ++ F L +LNQ + RK P+ +T +++ L + R I
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMT-RKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ ++ K C + + YN I A ++ +A + F + +C P+V +FN+++ L
Sbjct: 314 LGEMR-RKSCSPT-VYTYNTILDGYCRANQLEEARK--FMLEEMDCPPNVVSFNIMIRGL 369
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPN 232
E + A + D ++ GLC ++ A V + ++ C PN
Sbjct: 370 CKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPN 429
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TYSTL+ GLC G ++ A G +E+ G + T+N+LI RK + E+ +LL+
Sbjct: 430 SITYSTLVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLD 485
Query: 293 RMKGKG 298
M +G
Sbjct: 486 DMVQRG 491
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 162/376 (43%), Gaps = 73/376 (19%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++VL++ R+ P +Y +I+ + F + +++ + C G V+
Sbjct: 142 LAVLDEM-PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG-CALDVGNCNLVL 199
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+ G + KA+ L D+PS+ C P V ++N VL L AK +G +Q + ++
Sbjct: 200 NAICDQ-GSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMAC 258
Query: 195 EIDACCLNILLK-----------------------------------GLCENGNLEAAFY 219
+ N L+ G+C+ G+L+ A
Sbjct: 259 PPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHE 318
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGL-----------------------------------C 244
+L+ P +PNV Y+TL+ GL C
Sbjct: 319 ILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFC 378
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ G V+ LLE+M G D +T+ +I+G K+G ++E + LL+ M GC PN+
Sbjct: 379 QNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTI 438
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
SY VL GL +R+ +A++L+ +MI + + +++ LI+ LC + LVE +LK+M
Sbjct: 439 SYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 498
Query: 365 VQQGFVPRMGMWREIV 380
+ G P + + ++
Sbjct: 499 LVNGCSPDLISYSTVI 514
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 150/326 (46%), Gaps = 37/326 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLCRFSDGFFYNVI 134
P+ Y ++ L AKR+ ++++M+ + + LCR +G F V
Sbjct: 225 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCR--NGLFERVH 282
Query: 135 KIYGNMA---------------------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
++ MA G + A E L MPSY P+V +N +L L
Sbjct: 283 EVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGL 342
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
SA+ + E + + +D NIL+ C+NG ++ +L++ C P+V
Sbjct: 343 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDV 402
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY+T+++G C++G ++EA LL+ M + G +T+++ I++ GL + + L+ +
Sbjct: 403 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 462
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M +GC N ++ ++ L K +A EL+ +M+ SP +SY +I GL
Sbjct: 463 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREI 379
++ +L MV +G P ++ I
Sbjct: 523 TDEALELLNVMVNKGMSPNTIIYSSI 548
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++ L A+R++ E+++ + +K C D F N++ + G + + I
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEM-FDKDCPLDDVTF-NILVDFFCQNGLVDRVI 387
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M + C P V T+ V+N L E + S G + + I+LKGL
Sbjct: 388 ELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 447
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C A ++ + +Q C N T++TL++ LC+KG VE+A LL++M G D
Sbjct: 448 CSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 507
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++++ +I GL K GK +E ++LL M KG PN+ Y + L + R + ++
Sbjct: 508 ISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDN 567
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + V Y +I LC + E L MV G VP
Sbjct: 568 IQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 610
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GRI+ A+ L +MP C P ++++L + + G +D
Sbjct: 136 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNC 195
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK---GNVEEAFGLLER 258
N++L +C+ G+++ A ++L + P CEP+V +Y+ ++ GLC G V+E L+E
Sbjct: 196 NLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEE 252
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M + VTFN LIS L + G E ++L +M GC P+ Y ++ G+ +
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGH 312
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A E++ RM + P+ V Y L+ GLC+ + E+ + +L +M
Sbjct: 313 LKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%)
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
G+++ AA + V +A +++ LC G + A VLDE P++ C P Y +
Sbjct: 104 GQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVI 163
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ C G A +LE + + G D N++++ + QG V++ + LL + GC
Sbjct: 164 LEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGC 223
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P+ SY VL GL KR+ +EL+ M+ P+ V++ LI LC L E V
Sbjct: 224 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHE 283
Query: 360 VLKKMVQQGFVPRMGMWREIV 380
VL +M + G P + M+ I+
Sbjct: 284 VLAQMAEHGCTPDIRMYATII 304
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 139/284 (48%), Gaps = 2/284 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD ++ + ++++ Q D + ++++++ V D Y + G I
Sbjct: 361 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGC--MPDVITYTTVINGFCKEGLI 418
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ L M + C P+ ++ +VL L SA+ + + + + + + G ++ N L
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ LC+ G +E A +L + C P++ +YST++ GL + G +EA LL M ++G+
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+T+ ++ + S L ++G++ + +++ + ++ ++ Y V+ L + A E
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ M+ P+ +Y LI GL ++ V++ +L ++ +G
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 129/251 (51%), Gaps = 1/251 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A L M P V T+N ++N + + Q ++ + + +GV D
Sbjct: 531 GKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTY 590
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
IL+ G C++ ++ A + E ++N P+ TYS+L+ GLC+ G + + L++ M
Sbjct: 591 TILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRD 650
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G AD +T+N LI GL K G +++ + L +MK +G PN+ ++ +L GL R +
Sbjct: 651 RGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKD 710
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A+E+ ++ + Y +I+G C Q L+E+ +L KM + G +P + I+
Sbjct: 711 AQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIIN 770
Query: 382 CVTFGKDNRNR 392
+ F KD ++
Sbjct: 771 AL-FKKDENDK 780
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 148/296 (50%), Gaps = 3/296 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I +LN+ K NP+ YT++++ L + + + ++ + K C D F YN +
Sbjct: 502 IGLLNEMV-LKTINPDVRTYTILVDALGKEGKVKEAKSVLAVM--LKACVKPDVFTYNTL 558
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+ + KA M P V T+ +++N +K+ E ++ + +
Sbjct: 559 MNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNM 618
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D + L+ GLC++G + + ++DE + +V TY++L+ GLC+ G++++A
Sbjct: 619 VPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIA 678
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L +M+ +GI +T TF IL+ GL K G++++ ++ + + KG + + Y ++YG
Sbjct: 679 LFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHC 738
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ EA ++ +M P+ V++ +I+ L + + + +L++M+ +G +
Sbjct: 739 KQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 3/248 (1%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ KA+ LF + +P + FN +L+ K Y + G++ D LN
Sbjct: 288 RVDKALN-LFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLN 346
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C G + F VL + K+ P+ T +TL+ GLC KG V++A +++ ++
Sbjct: 347 ILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 406
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + V++ LI+G+ K G +KLL ++ G+ PN Y ++ L + EA
Sbjct: 407 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 466
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L M + +S V+Y LI+G C +++ +L +MV + P + + +V
Sbjct: 467 YGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVD- 525
Query: 383 VTFGKDNR 390
GK+ +
Sbjct: 526 -ALGKEGK 532
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 134/288 (46%), Gaps = 10/288 (3%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRISKAIETLFDMP 155
I++ A+ K + + R++++ + D F N+ I + +M G+I+ L +
Sbjct: 313 ILDSFAKMKHYSTAVSLSHRLELKGIQ--PDLFTLNILINCFCHM-GQITFGFSVLAKIL 369
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILLKGLCENG 212
PS T N ++ L L G+++ KL G +++ L+ G+C+ G
Sbjct: 370 KRGYPPSTVTLNTLIKGLC---LKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 426
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+ A +L + + +PNV YST++ LC+ V EA+GL M +GI AD VT++
Sbjct: 427 DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYS 486
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
LI G GK++E + LL M K P+ +Y ++ L + + EAK ++ M+
Sbjct: 487 TLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKA 546
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P +Y L++G V+ V M G P + + ++
Sbjct: 547 CVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 594
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 90/177 (50%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ LC+ + A+ + E + +V TYSTL++G C G ++EA GLL M +
Sbjct: 453 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKT 512
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I+ D T+ IL+ L K+GKV+E +L M P+ +Y ++ G L +A+
Sbjct: 513 INPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQ 572
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ M ++P +Y LI+G C K+V++ + K+M Q+ VP + +V
Sbjct: 573 HVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLV 629
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
D P + PS++ + ++L V K+ K G D LN L+KGLC G
Sbjct: 29 DSPPFFLPPSIQNVDDAVSLSVLTKIL-----------KRGYPPDTVTLNTLIKGLCLKG 77
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
++ A + D+ Q + N +Y+TL++G+C G+ A L +++ + +N
Sbjct: 78 QVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYN 137
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
+I L K V E L M KG N +Y ++YG + EA L+ M+ +
Sbjct: 138 TIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLK 197
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++P+ +Y L+ LC + V++ VL M++
Sbjct: 198 TINPNVCTYNILVDALCKEGKVKEAKSVLAVMLK 231
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 161/377 (42%), Gaps = 38/377 (10%)
Query: 28 KRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLK-IFSNLRDPISVISVLNQYSKRKD 86
K + ++SP+ S K D SP L N+ D +S +SVL + KR
Sbjct: 5 KTSSVISSPTTSQNSQSPTPLK----DCDSPPFFLPPSIQNVDDAVS-LSVLTKILKR-G 58
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD-----GFFYNVIKIYGNMA 141
Y P+ T+ +N L I+ + + +V++ F D GF N + Y +
Sbjct: 59 YPPD----TVTLNTL--------IKGLCLKGQVKEALHFHDKLLAQGFQLNQVS-YATLI 105
Query: 142 ------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
G AI+ L + P+V+ +N +++ L +L E G+++ G+
Sbjct: 106 NGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGIS 165
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+ + L+ G C G L+ A +L+ + PNV TY+ L+ LC++G V+EA +
Sbjct: 166 ANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSV 225
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
L M + ++ +T++ L+ G +V++ + M G P+ SY ++ G
Sbjct: 226 LAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCK 285
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
KR +A L MI R P + + K++ K + ++ +G P +
Sbjct: 286 IKRVDKALNLFKEMILSRF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFT 344
Query: 376 WREIVGC------VTFG 386
++ C +TFG
Sbjct: 345 LNILINCFCHMGQITFG 361
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 115/288 (39%), Gaps = 51/288 (17%)
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+ +C+ D IK+ + GR++K P+V+ ++ +++ L +L
Sbjct: 419 INGVCKIGDT--RGAIKLLRKIDGRLTK--------------PNVEMYSTIIDALCKYQL 462
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT--- 235
E G+++ G+ D + L+ G C G L+ A +L+E + P+VRT
Sbjct: 463 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTI 522
Query: 236 --------------------------------YSTLMHGLCEKGNVEEAFGLLERMESEG 263
Y+TLM+G V++A + M G
Sbjct: 523 LVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG 582
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D T+ ILI+G K V+E + L + M K P++ +Y ++ GL R
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVW 642
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L+ M ++Y LI GLC ++ + KM QG P
Sbjct: 643 DLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRP 690
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 153/335 (45%), Gaps = 18/335 (5%)
Query: 53 KDWLSPTEV-----LKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
+D L PT++ + + D +S + +L + + PN +Y+ II+ L + R
Sbjct: 212 EDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRH 271
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
+++ ++ + + F D F YN + + +GR S A + L +M P V T+N
Sbjct: 272 SDAQNLFTEMQEKGI--FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
++N V + E + +Y G+ + + ++ G C+ L+AA ++ +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
C PN+ T++TL+ G C +++ LL M G+ ADT T+N LI G G +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER-----------MSP 336
+ LL+ M G P+ + +L GL D + +A E+ M + + P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y LI GL N+ + + + ++M +G VP
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 144/310 (46%), Gaps = 24/310 (7%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+L + +RK +P+ Y +IN + +F E++ E L R G N I
Sbjct: 312 LLQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYD----EMLPR---GIIPNTITY 363
Query: 137 YGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ G R+ A + M + C P++ TFN +++ AK + + +
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ D N L+ G G+L AA +L E P++ T TL+ GLC+ G +++
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Query: 252 AFGLLERMESE-----------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
A + + M+ G++ D T+NILISGL +GK E +L E M +G
Sbjct: 484 ALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 543
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P++ +Y ++ GL + R EA ++ M + SP+ V++ LI+G C V+D +
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Query: 361 LKKMVQQGFV 370
+M ++G V
Sbjct: 604 FCEMGRRGIV 613
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 6/248 (2%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ AI+ DM PSV F ++ ++V + + +Y + + D I
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+K C L A + K P+V T++TL+HGLC + V EA L +M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VTF L++GL ++G++ E + LL+RM G P +Y ++ G+ A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239
Query: 324 ELVGRMICERMS---PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE-I 379
+L+ +M E +S P+ V Y +I LC D + +M ++G P + + I
Sbjct: 240 DLLRKM--EEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 380 VGCVTFGK 387
VG + G+
Sbjct: 298 VGFCSSGR 305
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 122/264 (46%), Gaps = 1/264 (0%)
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
K+ KL D +N + + R+S+A+ M C P+V TF ++N L
Sbjct: 139 KITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK-QNCEPNVRTY 236
E + + G++ ++ G+C+ G+ +A +L + + + PNV Y
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIY 258
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
S ++ LC+ G +A L M+ +GI D T+N +I G G+ + +LL+ M
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+ P+ +Y ++ + + +F EA+EL M+ + P+ ++Y +I G C Q ++
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 357 VDWVLKKMVQQGFVPRMGMWREIV 380
+ + M +G P + + ++
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLI 402
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 142/292 (48%), Gaps = 15/292 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K +PN + +I+ AKR D +++ + L +D YN + I+G + G
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL--VADTTTYNTL-IHGFYLVGD 445
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-SAKLYGEIQ----------GIYTSAAKL 192
++ A++ L +M S P + T + +L+ L + KL ++ + S
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GVE D NIL+ GL G A + +E P + P+ TYS+++ GLC++ ++EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ + M S+ + VTF LI+G K G+V++G++L M +G N+ +Y ++ G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A ++ MI + P ++ + ++ GL +++ ++ +L+K+
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G E LE A + + + P+V + LM + + L ++ME +
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +F ILI K+ + ++ G +P+ ++ +L+GL + R EA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L +M P+ V++ L++GLC + + + +L +M++ G P + IV
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 136/300 (45%), Gaps = 3/300 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + + +T ++ L KR DI+ R ++ +L + F YN++ R
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR-RMTQLGCIPNVFSYNILLKGLCDENR 177
Query: 144 ISKAIETLFDMP--SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+A+E L MP +C P V ++ V+N + G Y G+ +
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ LC+ ++ A VL K PN RTY++++HG C G +EA G L++M S
Sbjct: 238 NSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G++ D VT+N L+ L K G+ E K+ + M +G P +Y +L G K E
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
L+ M+ + P+ + LI Q V+ V KM QQG P + ++G
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 120/264 (45%), Gaps = 2/264 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D P+ YT +IN + D + + + YN I A +
Sbjct: 194 DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGI--LPNVVTYNSIIAALCKAQAMD 251
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KA+E L M P+ +T+N +++ S+ E G GVE D N L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC+NG A + D K+ +P + TY TL+ G KG + E GLL+ M GI
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ F+ILI KQGKV++ M + +M+ +G P++ +Y V+ L R +A
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 326 VGRMICERMSPSFVSYKKLIHGLC 349
+MI ER+SP + Y LIH LC
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLC 455
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 2/273 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +PN +++++I A+ + D + +++ + L D Y + +GR
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL--NPDTVTYGTVIGILCKSGR 424
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ M P +N +++ L + + + + G+ +D N
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C+ G + + + D + +PN+ TYSTL+ G C G ++EA LL M S G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D VT+N LI+G K ++E+ + L M+ G P+ +Y +L GL +R AK
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
EL + +Y ++HGLC L ++
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDE 637
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 148/329 (44%), Gaps = 23/329 (6%)
Query: 70 DPISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFD-AIEDI 113
D +S +V+N + K D + PN Y II L +A+ D A+E +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVL 257
Query: 114 MQRIK--VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+K V CR YN I +G+ +AI L M S P V T+N +++
Sbjct: 258 TSMVKNGVMPNCRT-----YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L E + ++ S K G++ + LL+G G L +LD + P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N +S L+ ++G V++A + +M +G++ DTVT+ +I L K G+VE+ M+
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E+M + P + Y +++ L ++ +AKEL+ M+ + + + +I C +
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V + + + MV+ G P + + ++
Sbjct: 493 GRVIESEKLFDLMVRIGVKPNIITYSTLI 521
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 128/294 (43%), Gaps = 4/294 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P +Y +I+ L ++D ++++ + +C D F+N I GR+ ++
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL--DTIFFNSIIDSHCKEGRVIES 498
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E LFD M P++ T++ +++ A E + S +G++ D N L+
Sbjct: 499 -EKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+ +E A + E P++ TY+ ++ GL + A L + G
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T+NI++ GL K +E +++ + + + ++ ++ LL R EAK+L
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P +Y + L Q L+E++D + M + G M IV
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PN+ TY L+ C G ++ F L + +G D + F L+ GL + + M +
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 291 -LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE--RMSPSFVSYKKLIHG 347
L RM GC PN SY +L GL D+ R EA EL+ M + P VSY +I+G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ ++ +M+ +G +P + + I+ +
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAAL 244
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 8/242 (3%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDI---MQRIKVEKLCRFSDGFFYNVIKIYGNM 140
R PN Y+ +I+ A + D + M + ++ C + KI
Sbjct: 507 RIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKI---- 562
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
R+ A+ +M S P + T+N++L L + + +Y + G +++
Sbjct: 563 -SRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI+L GLC+N + A + + + RT++ ++ L + G +EA L +
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T++++ L +QG +EE L M+ GC NS ++ LL +
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 741
Query: 321 EA 322
A
Sbjct: 742 RA 743
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 123/262 (46%), Gaps = 1/262 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+GR T DM + C P+ T+ +L L A+ + E + ++ A G +
Sbjct: 30 SGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFS 89
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+IL+ GLC ++ A +L+E +PNV TY +L+ GLC+ G ++EA L RM
Sbjct: 90 YSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMV 149
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G D V +N+LI G K+G + E +L E M KGC P +Y +L G K F
Sbjct: 150 YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFG 209
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ L M+ + P+ ++ L+ G C + + + +M G P + + ++
Sbjct: 210 RVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLI 269
Query: 381 -GCVTFGKDNRNRVYVTETVDS 401
G + GK + + + E + S
Sbjct: 270 RGMCSKGKPHEAQRLLREMIRS 291
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 142/329 (43%), Gaps = 37/329 (11%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ PN Y +++ L + + D+ R+ V + C DG YNV+ + G + +
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM-VYRGCP-PDGVVYNVLIDGFSKKGDMGE 175
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A +M C P+V T+N +L+ +G +Q ++ + G + N LL
Sbjct: 176 AYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLD 235
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+ G++ A + E C P+V +Y+TL+ G+C KG EA LL M G+
Sbjct: 236 GFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGP 295
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL---------------- 310
D V++NILI G K G ++ +KL + G P++ SY ++
Sbjct: 296 DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF 355
Query: 311 -------------------YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
GL +R E+ EL M+ P Y L++ LC
Sbjct: 356 KDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKA 415
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
K +DV + ++ ++GF P + + + I+
Sbjct: 416 KRSDDVCEIFHELTERGFSPDVEISKVIL 444
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 4/296 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-RISKA 147
PN Y ++ L QA+RF+ + + + + S F I I G G ++ +A
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGC---SPNVFSYSILIAGLCRGQKVDEA 106
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L +M P+V T+ +L+ L E +++ G D N+L+ G
Sbjct: 107 AELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDG 166
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ G++ A+ + +E ++ C P V TY++L+ G KG L + M +G +
Sbjct: 167 FSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TFN L+ G K G + E +L M+ GC P+ SY ++ G+ K + EA+ L+
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLR 286
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
MI + P VSY LI G ++ + ++ + G P + I+ C+
Sbjct: 287 EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 97/209 (46%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
++N +L +L + + G Y G + LL+ LC+ E A V
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
Q C PNV +YS L+ GLC V+EA LL M G + VT+ L+SGL K GK+
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+E + L RM +GC P+ Y ++ G K EA L M+ + P+ +Y L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ G + V + K M++QG VP +
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNI 227
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+++N L+ L K G+ + M GC PN+ +Y +L L +RF EA+ +
Sbjct: 17 TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
M + SP+ SY LI GLC + V++ +L +M+ G P + + ++ G G
Sbjct: 77 GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136
Query: 387 K 387
K
Sbjct: 137 K 137
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 63/150 (42%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN++ + +G + AI+ +++P P +++ +++ L A G ++
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G DA + L+ GLC L + + K C P + Y+ LM+ LC+ +
Sbjct: 360 ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSD 419
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRK 280
+ + + G D +++ LR+
Sbjct: 420 DVCEIFHELTERGFSPDVEISKVILETLRR 449
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 145/306 (47%), Gaps = 3/306 (0%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ VL++ + K Y P+ T++I+ + + ++ K C+ D YNV+
Sbjct: 191 MQVLDRQLQSKCY-PDVVTCTVLIDATCKESGVGQAMKLFNEMR-GKGCK-PDVVTYNVL 247
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
GR+ +AI L +PSY C V + N++L L S + + + + + G
Sbjct: 248 IKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGC 307
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
NIL+ LC+ G L A VL+ PK PN R+++ L+ G C + ++ A
Sbjct: 308 FPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIE 367
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LE M S G D VT+NIL++ L K GKV++ + +L ++ KGC P+ SY V+ GLL
Sbjct: 368 HLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLL 427
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ A EL+ M + + P ++ ++ GL + V + + G P
Sbjct: 428 KVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAF 487
Query: 375 MWREIV 380
++ I+
Sbjct: 488 IYNSIM 493
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 145/325 (44%), Gaps = 37/325 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ K P+ Y ++I + R D E I+ K+ SD +N+I G
Sbjct: 233 RGKGCKPDVVTYNVLIKGFCKEGRLD--EAIIFLKKLPSYGCQSDVISHNMILRSLCSGG 290
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI-------------------- 182
R A++ L M C+PSV TFN+++N L L G+
Sbjct: 291 RWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFN 350
Query: 183 ---------QGIYTSAAKLGVEIDACC------LNILLKGLCENGNLEAAFYVLDEFPKQ 227
+GI + L + + C NILL LC++G ++ A +L + +
Sbjct: 351 PLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSK 410
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
C P++ +Y+T++ GL + G E A LLE M +G+ D +T ++ GL ++GKV E
Sbjct: 411 GCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEA 470
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+K +KG G PN+ Y ++ GL ++ A + + M+ P+ SY LI G
Sbjct: 471 IKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKG 530
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPR 372
+ + L E+ + ++ +G V +
Sbjct: 531 ITYEGLAEEASKLSNELYSRGLVKK 555
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 152/338 (44%), Gaps = 13/338 (3%)
Query: 54 DWLSPTEVLKIFSNL---RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
D ++ T +++ F + ++ ++ +L + D N Y ++IN ++ +
Sbjct: 103 DVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANS----YNVLINAYCKSGEIEEA 158
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
++ V D ++ G++ +A++ L C+P V T +++
Sbjct: 159 LRVLDHTSVAPNAATYDAVLCSLCD-----RGKLKQAMQVLDRQLQSKCYPDVVTCTVLI 213
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
+ G+ ++ G + D N+L+KG C+ G L+ A L + P C+
Sbjct: 214 DATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQ 273
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
+V +++ ++ LC G +A LL M +G VTFNILI+ L ++G + + + +
Sbjct: 274 SDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNV 333
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
LE M G PNS S+ ++ G ++K A E + M+ P V+Y L+ LC
Sbjct: 334 LEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCK 393
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
V+D +L ++ +G P + + ++ G + GK
Sbjct: 394 DGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGK 431
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
G + G+ TS EI C L NG LE L+ + P+V + L
Sbjct: 57 GALNGVNTSLNFEESEIHHLCR------LIRNGELEEGSRFLEYMTNKGKIPDVVACTAL 110
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ C+ G + A ++ +E G D ++N+LI+ K G++EE +++L+
Sbjct: 111 IREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTS---V 167
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
PN+A+Y VL L D+ + +A +++ R + + P V+ LI C + V
Sbjct: 168 APNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMK 227
Query: 360 VLKKMVQQGFVP 371
+ +M +G P
Sbjct: 228 LFNEMRGKGCKP 239
>gi|224114223|ref|XP_002316701.1| predicted protein [Populus trichocarpa]
gi|222859766|gb|EEE97313.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 140/246 (56%), Gaps = 6/246 (2%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
A+Y I +L+ +++FD +E+I++ K K +GF +I +YG++ G A +
Sbjct: 65 AIYKETIRRLSVSRKFDYVEEILEDQKQYKDMS-KEGFNARLISLYGSV-GMFDHARKVF 122
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACCLNILLKGLCE 210
+M C +V +FN +L +S+K + E++G++ +K + +E D N ++K CE
Sbjct: 123 DEMRERQCARTVMSFNALLGACLSSKNFDEVEGLFRGLSKEIKIEPDLISYNTVIKAFCE 182
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G+L++A +LDE ++ EP++ T++TL+HG KG + + E+M+ + ++ D +
Sbjct: 183 MGSLDSAVSLLDEMKRKGLEPDLITFNTLLHGFYAKGRFVDGERIWEQMKEKNVEPDVRS 242
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL---VG 327
+N + GL + ++E+ +K++E MK +G ++ SY ++ G +++ AK +G
Sbjct: 243 YNAKLLGLTLEKRMEDVVKVVEEMKSEGIQLDTFSYSALIRGFVNEGDLKNAKHWYLEIG 302
Query: 328 RMICER 333
R C+R
Sbjct: 303 RSGCKR 308
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 86/211 (40%), Gaps = 4/211 (1%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
SK P+ Y +I + D+ ++ +K + L D +N + ++G A
Sbjct: 161 SKEIKIEPDLISYNTVIKAFCEMGSLDSAVSLLDEMKRKGLE--PDLITFNTL-LHGFYA 217
Query: 142 -GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GR M N P V+++N L L K ++ + G+++D
Sbjct: 218 KGRFVDGERIWEQMKEKNVEPDVRSYNAKLLGLTLEKRMEDVVKVVEEMKSEGIQLDTFS 277
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L++G G+L+ A + E + C+ + T L+ +KG+ A+G+ + +
Sbjct: 278 YSALIRGFVNEGDLKNAKHWYLEIGRSGCKRDKLTLEGLIPFALQKGDFMFAYGICKDVL 337
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+ ++ L K+ ++E +L+
Sbjct: 338 CSKLLVQNALIQSVVDALAKESRMEAAKELV 368
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 138/294 (46%), Gaps = 2/294 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q R+D P+ + L+I+ + + D ++ Q + ++ C D + YN++
Sbjct: 363 LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ-LMTDRGC-LPDIYTYNIMISG 420
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
A RI A + L M C P V T+N +++ L A E +Y G +D
Sbjct: 421 ACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLD 480
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+ L+ GLC++ L+ A +L E + P+V Y+ L+HG C+ ++++
Sbjct: 481 VVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFS 540
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M +G +T++I+I L K +V +G LL+ M +G P++ Y V+ GL
Sbjct: 541 EMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSD 600
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ EA EL M +P+ V+Y L+ LC +++ +L+ M G +P
Sbjct: 601 SYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLP 654
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 153/341 (44%), Gaps = 10/341 (2%)
Query: 45 HHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQA 104
+H L D ++ + ++ F RD +L++ KR P+ A+Y II L
Sbjct: 157 NHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG-IVPHNAVYNTIIKGLCDN 215
Query: 105 KRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVK 164
R D+ ++ +++ C S Y ++ + RIS A L DM C P+V
Sbjct: 216 GRVDSA--LVHYRDMQRNCAPS-VITYTILVDALCKSARISDASLILEDMIEAGCAPNVV 272
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+N ++N E ++ + D NIL+ G C+ + +L E
Sbjct: 273 TYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM 332
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
K CEPN TY+TLM L + G +AF L + M TFN++I K G++
Sbjct: 333 VKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQL 392
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ +L + M +GC P+ +Y ++ G R +A++L+ RM P V+Y +
Sbjct: 393 DLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSI 452
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
+ GLC V++ + + ++++ G G + ++V C T
Sbjct: 453 VSGLCKASQVDEA-YEVYEVLRNG-----GYFLDVVTCSTL 487
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 134/293 (45%), Gaps = 4/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN Y +++ L ++ ++ DA + ++ + + C+ S F +I ++ + G++ A
Sbjct: 339 PNFITYNTLMDSLVKSGKYIDAFN--LAQMMLRRDCKPSHFTFNLMIDMFCKV-GQLDLA 395
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E M C P + T+N++++ A + + + + G D N ++ G
Sbjct: 396 YELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSG 455
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ ++ A+ V + +V T STL+ GLC+ +++A LL ME G D
Sbjct: 456 LCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 515
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + ILI G K ++++ + M KGC P +Y V+ L R + L+
Sbjct: 516 VVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLK 575
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ ++P + Y +I GLC ++ + K M Q G P + + +V
Sbjct: 576 TMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLV 628
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 123/232 (53%), Gaps = 4/232 (1%)
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKAIETLFD 153
+ +I+ L +++R D E +++ ++E+ D Y ++ I+G A ++ K++ +
Sbjct: 485 STLIDGLCKSRRLDDAEKLLR--EMERNGSAPDVVAYTIL-IHGFCKADQLDKSLAFFSE 541
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M C P+V T+++V++ L + + + + + GV DA ++ GLC++ +
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A+ + + C P V TY+ L+ LC+ ++EA LLE MES+G DTVT+N
Sbjct: 602 YDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNS 661
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ G K + ++ +L + MK +GC P Y +L L+ +++ +A E+
Sbjct: 662 VFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEI 713
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 83/204 (40%), Gaps = 34/204 (16%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL + A+ + C P+ TYSTL++G C+ + ++A+ LL+ ME
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMK-------------------------------- 289
GI +N +I GL G+V+ +
Sbjct: 196 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDA 255
Query: 290 --LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+LE M GC PN +Y ++ G EA L +M+ SP +Y LI G
Sbjct: 256 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 315
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVP 371
C Q+ +D +L++MV+ G P
Sbjct: 316 YCKQERPQDGAKLLQEMVKYGCEP 339
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T + L+ K +EA+ L + D++T++ LI+G K ++ +LL+ M
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM 193
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG-RMICERMSPSFVSYKKLIHGLCNQKL 353
+ +G P++A Y ++ GL D R A LV R + +PS ++Y L+ LC
Sbjct: 194 EKRGIVPHNAVYNTIIKGLCDNGRVDSA--LVHYRDMQRNCAPSVITYTILVDALCKSAR 251
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ D +L+ M++ G P + + ++
Sbjct: 252 ISDASLILEDMIEAGCAPNVVTYNTLI 278
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 85/212 (40%), Gaps = 41/212 (19%)
Query: 89 PNEALYTLIINKLAQAKRFDAIED--IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
P Y+++I+KL ++ R + D ++ + +E+ D Y + + +
Sbjct: 549 PTVITYSIVIDKLCKSAR---VRDGCMLLKTMLERGVT-PDAIVYTSVIDGLCKSDSYDE 604
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A E M C P+V T+ N+L+
Sbjct: 605 AYELYKLMKQTGCAPTVVTY-----------------------------------NVLVD 629
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ L+ A ++L+ C P+ TY+++ G + ++AF L + M+S G
Sbjct: 630 KLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSP 689
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
+++L++ L + K+++ M++ E G
Sbjct: 690 TPFMYSLLLTKLVAEEKMDQAMEIWEEALEAG 721
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 138/291 (47%), Gaps = 13/291 (4%)
Query: 87 YNPNEAL-YTLIINKLAQAKRFD----AIEDIMQR-IKVEKLCRFSDGFFYNVIKIYGNM 140
Y P +AL Y I+ +L + KR D +E++ R IK D F YN +
Sbjct: 4 YAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIK-------PDAFIYNFVLSGLCQ 56
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
++ +A M P+V T+N ++N L A ++ A G
Sbjct: 57 EEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVS 116
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C+ +L AA V D+ + NC PNV TY+TL+ GL + G V+ A +L+ M
Sbjct: 117 YNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMV 176
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G+ + T++ LI G K +V+E KLLE+M +G P +Y +L L +
Sbjct: 177 KKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLE 236
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A +L M R P+ V+Y L+ LC+ K ++ + +M+ +G P
Sbjct: 237 DAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPP 287
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 2/276 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +Y +++ L Q ++ + + +++ +++ + YN + A RI A
Sbjct: 42 PDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI--NPNVVTYNTLINGLCKAWRIETAY 99
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E +M P+ ++N +++ K + ++ + + L+ GL
Sbjct: 100 ELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGL 159
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
++G ++AA VLD K+ PNV TYS L+ G C+ V+EA LLE+M ++GI
Sbjct: 160 SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTV 219
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+NIL++ L + K+E+ KL M + C+P +Y +L L K+ A L
Sbjct: 220 VTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAE 279
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
MI + P ++Y L GL V + +++KM
Sbjct: 280 MIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 95/180 (52%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
DA +++ LC+ ++ A ++E + +P+ Y+ ++ GLC++ VEEA L
Sbjct: 8 DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 67
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E+M + I+ + VT+N LI+GL K ++E +L + M GKG P SY ++ G K
Sbjct: 68 EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK 127
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
K AK++ +M+ P+ V+Y LI GL V+ VL MV++G P + +
Sbjct: 128 KDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 187
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K Y P E Y +I+ + K A +D+ ++ V C + Y + + +G++
Sbjct: 108 KGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM-VRSNC-VPNVVTYTTLIDGLSKSGKV 165
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A E L M P+V T++ +++ + E + G+ NIL
Sbjct: 166 QAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNIL 225
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L LC LE AF + ++ C P V TY+TL+ LC ++ A L M ++G
Sbjct: 226 LNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGC 285
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMK 295
D +T++ L GL + GKV E +L+E+MK
Sbjct: 286 PPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 10/253 (3%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NPN Y +IN L +A R + ++ + + + YN + I G + A
Sbjct: 76 NPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGY--VPTEVSYNTL-IDGFCKKKDLVA 132
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDACCLNI 203
+ +FD M NC P+V T+ +++ L + G++Q + K GV + +
Sbjct: 133 AKDVFDKMVRSNCVPNVVTYTTLIDGLSKS---GKVQAAAEVLDGMVKKGVTPNVATYSC 189
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C+ ++ A +L++ Q P V TY+ L++ LC +E+AF L M
Sbjct: 190 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 249
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
VT+N L+ L +++ +L M KGC P++ +Y + +GL + EA+
Sbjct: 250 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 309
Query: 324 ELVGRMICERMSP 336
EL+ +M + +P
Sbjct: 310 ELMEKMKLTKRNP 322
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P+ TY ++ LC+ +++A +E M + GI D +N ++SGL ++ KVEE L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
E+M + PN +Y ++ GL R A EL M + P+ VSY LI G C
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+K + V KMV+ VP + + ++
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLI 156
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDA---IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
++ P + +IN ++ D ++ M +V F D F Y+V+
Sbjct: 253 KRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRV-----FPDVFTYSVLINGLCK 307
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ A + +M P+ TF ++N IY + GV+ D
Sbjct: 308 EGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVIT 367
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ GLC+ G+L A ++ E ++ +P+ TY+ L+ G C++G++E A + + M
Sbjct: 368 YNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMV 427
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
EGI+ D V F LISG ++G+V E + L M G P+ A+Y V++G K
Sbjct: 428 KEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVK 487
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L+ M C+ P V+Y L++GLC Q +++ + +L M+ G VP
Sbjct: 488 TGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVP 538
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V FN++++ L E Q ++ K G+ N L+ G C++GNL+ F +
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL 282
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ P+V TYS L++GLC++G +++A L M G+ + VTF LI+G
Sbjct: 283 KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ + GM++ ++M KG P+ +Y ++ GL EAK+LV M + P +
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
Y LI G C + +E + K+MV++G
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEG 430
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 133/293 (45%), Gaps = 5/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++IN L + + D + + L +D F +I + + GR +
Sbjct: 293 PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP-NDVTFTTLINGHC-VTGRADLGM 350
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M P V T+N ++N L E + + + G++ D +L+ G
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC 410
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G+LE+A + E K+ E + ++ L+ G C +G V EA L M GI D
Sbjct: 411 CKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDD 470
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+ ++I G K+G V+ G KLL+ M+ G P +Y +L GL + + A L+
Sbjct: 471 ATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDA 530
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
M+ + P ++Y L+ G C ED D K ++G V G + ++G
Sbjct: 531 MLNLGVVPDDITYNILLEGHCKHGNREDFD---KLQSEKGLVQDYGSYTSLIG 580
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 143/332 (43%), Gaps = 16/332 (4%)
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
P S++S S + + + Y + + L K + ++Q + K + F
Sbjct: 83 PPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVF 142
Query: 131 YNVIKIYGNM---------------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
+V++ G +G S AI+ + +N + + + L+
Sbjct: 143 TSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMK 202
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
L Y G D C N+L+ LC+ + A + E K+ P V +
Sbjct: 203 LNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVS 262
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
++TL++G C+ GN+++ F L M + D T+++LI+GL K+G++++ KL M
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC 322
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+G PN ++ ++ G R E+ +M+ + + P ++Y LI+GLC +
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLR 382
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
+ ++ +M Q+G P + ++ GC G
Sbjct: 383 EAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEG 414
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 149/327 (45%), Gaps = 38/327 (11%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
+KR++Y + + Y +I+ L +++ + ++Q + +C + V+++ GN A
Sbjct: 114 AKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGN-A 172
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-VEIDACC 200
+SKAI + + + C P+ + +N ++ +L+ Y ++ +Y + G D
Sbjct: 173 KMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMT 232
Query: 201 LNILLKGLCENGNLEAAFYVLDEFP----------------------------------- 225
+ L+ C+ G ++A +L+E
Sbjct: 233 YSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMR 292
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
Q C P+V TY+ L+ GL + G ++EA+ M+ EG DT+ N +I+ L K G+++
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLD 352
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLD-KKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ MKL + M C P+ +Y ++ L + K R E RM +SPS +Y L
Sbjct: 353 DAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSIL 412
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I G C +E +L++M ++GF P
Sbjct: 413 IDGFCKTNRMEKAMMLLEEMDEKGFPP 439
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 127/292 (43%), Gaps = 41/292 (14%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDY-NPNEALYTLIINKLAQAKRFDAIEDIMQRI 117
T ++ +F L D +S+ + R Y P+ YT +I L +A R D +
Sbjct: 269 TMLVALFFKLNDVHGALSLFEEM--RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEM 326
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
+ E CR N+I G AGR+ A++ +M + C PSV T+N ++ L +K
Sbjct: 327 QREG-CRPDTIVMNNMINFLGK-AGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESK 384
Query: 178 LYG-EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE-----FP------ 225
E+ + + G+ + +IL+ G C+ +E A +L+E FP
Sbjct: 385 SRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAY 444
Query: 226 -----------------------KQNC-EPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
K+NC + R Y+ ++ L + G +++A + + M
Sbjct: 445 CSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNK 504
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
G D +N L+SGL + G ++E + + RM+ GC P+ SY +L GL
Sbjct: 505 LGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGL 556
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 135/320 (42%), Gaps = 6/320 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ + ++ F L S I +LN+ K P +YT+++ + +
Sbjct: 229 DTMTYSALISAFCKLGRRDSAIQLLNEM-KDNGMQPTTKIYTMLVALFFKLNDVHGALSL 287
Query: 114 MQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
+ ++ + CR D F Y +I+ G AGRI +A ++M C P N ++N
Sbjct: 288 FEEMR-HQYCR-PDVFTYTELIRGLGK-AGRIDEAYHFFYEMQREGCRPDTIVMNNMINF 344
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN-CEP 231
L A + ++ L N ++K L E+ + + E K++ P
Sbjct: 345 LGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 404
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+ TYS L+ G C+ +E+A LLE M+ +G + LI L K + + +L
Sbjct: 405 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ +K +S Y ++ L R +A + M +P +Y L+ GL
Sbjct: 465 QELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART 524
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
++++ +++M + G +P
Sbjct: 525 GMLDEALSTMRRMQEHGCIP 544
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 126/281 (44%), Gaps = 2/281 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +IN + D + + D YN I A + KA+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGI--LPDVVTYNSIIAALCKAQAMDKAM 251
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M P T+N +L+ S+ E G GVE D ++L+ L
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+NG A + D K+ +P + TY TL+ G KG + E GLL+ M GI D
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
F+ILI QGKV++ M + +M+ +G PN+ +Y V+ L R +A +
Sbjct: 372 YVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
MI E +SP + Y LIHGLC E + ++ +M+ +G
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 5/321 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + + +T ++ L KR DI+ R E C + F YN++ R
Sbjct: 115 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGC-IPNVFSYNILLKGLCDENR 173
Query: 144 ISKAIETLFDMP---SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+A+E L M P V ++ V+N + Y G+ D
Sbjct: 174 SQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVT 233
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ LC+ ++ A VL+ K P+ TY++++HG C G +EA G L++M
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+G++ D VT+++L+ L K G+ E K+ + M +G P +Y +L G K
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E L+ M+ + P + LI NQ V+ V KM QQG P + ++
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 381 GCVT-FGKDNRNRVYVTETVD 400
G + G+ +Y + +D
Sbjct: 414 GILCKSGRVEDAMLYFEQMID 434
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 128/273 (46%), Gaps = 2/273 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +P+ +++++I A + D + +++ + L + Y + +GR
Sbjct: 364 RNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGL--NPNAVTYGAVIGILCKSGR 421
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ M P +N +++ L + + + + G+ ++ N
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C+ G + + + + + +PNV TY+TL++G C G ++EA LL M S G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ +TVT++ LI+G K ++E+ + L + M+ G P+ +Y +L GL +R AK
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
EL R+ +Y ++HGLC KL +D
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 146/326 (44%), Gaps = 17/326 (5%)
Query: 70 DPISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIM 114
D +S +V+N + K D + P+ Y II L +A+ D +++
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ + D YN I +G+ +AI L M S P V T++L+++ L
Sbjct: 255 NTMVKNGV--MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLC 312
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E + I+ S K G++ + LL+G G L +LD + P+
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHY 372
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
+S L+ +G V++A + +M +G++ + VT+ +I L K G+VE+ M E+M
Sbjct: 373 VFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+G P + Y +++GL ++ A+EL+ M+ + + + + +I C + V
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + + MV+ G P + + ++
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLI 518
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 112/280 (40%), Gaps = 35/280 (12%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D Y+++ Y GR +A + M P + T+ +L + E+ G+
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G+ D +IL+ G ++ A V + +Q PN TY ++ LC+
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGL---------------------------- 278
G VE+A E+M EG+ + +N LI GL
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 479
Query: 279 -------RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
K+G+V E KL E M G PN +Y ++ G + EA +L+ M+
Sbjct: 480 NSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS 539
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P+ V+Y LI+G C +ED + K+M G P
Sbjct: 540 VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 139/335 (41%), Gaps = 41/335 (12%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG-FFYNVIKIYG-NM 140
+++ NPN Y +I L ++ R +ED M + S G YN + I+G
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGR---VEDAMLYFEQMIDEGLSPGNIVYNSL-IHGLCT 453
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ +A E + +M + FN +++ E + ++ ++GV+ +
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVIT 513
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C G ++ A +L +PN TYSTL++G C+ +E+A L + ME
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEME 573
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK--- 317
S G+ D +T+NI++ GL + + +L R+ G ++Y +L+GL K
Sbjct: 574 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 633
Query: 318 --------------------------------RFPEAKELVGRMICERMSPSFVSYKKLI 345
R EAK+L + P++ +Y+ +
Sbjct: 634 DALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 693
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ Q L+E++D + M G GM IV
Sbjct: 694 ENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 2/239 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R PN Y +IN A + D ++ + L + + + +I Y ++ R
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL-KPNTVTYSTLINGYCKIS-R 561
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ +M S P + T+N++L L + + +Y + G +I+ NI
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L GLC+N + A + + + RT++ ++ L + G +EA L S G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ + T+ ++ + QG +EE +L M+ GC +S ++ LL + A
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 143/296 (48%), Gaps = 2/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN Y+++++ + + + R++ E + F N+I AGR
Sbjct: 497 KGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIA--PSDFTCNIIINGLCKAGRT 554
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S++ + L + P+ T+N +++ V +YT K+GV + L
Sbjct: 555 SESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNL 614
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C++ N++ A V+DE + E +V Y L+ G C KG++ A LL ++ G+
Sbjct: 615 INGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGL 674
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ V ++ +ISG RK +E + L +RM +G + Y ++ GLL + + A E
Sbjct: 675 SPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASE 734
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L M+ + + P ++Y LIHGLCN+ +E+ +L+ M ++ P + ++ ++
Sbjct: 735 LYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLI 790
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 128/281 (45%), Gaps = 3/281 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +II + D +I ++K + + S F I G + R +
Sbjct: 362 PNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDI---SPTVFNVNSLIRGYLKARSPEEA 418
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
LFD +V T+N +L+ L E I+ + GV N ++ G
Sbjct: 419 SKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGH 478
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G++++A V E ++ +PN+ TYS LM G +KG+ E AFGL +RM E I
Sbjct: 479 CQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSD 538
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T NI+I+GL K G+ E L+++ +G P +Y ++ G + + A +
Sbjct: 539 FTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTE 598
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
M +SP+ +Y LI+G C ++ V+ +M +G
Sbjct: 599 MCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGI 639
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P++ +IIN L +A R +D ++++ E YN I G ++ A+
Sbjct: 536 PSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGF--IPTCMTYNCIIDGFVKEGSVNSAL 593
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M P+V T+ ++N + + G+E+D L+ G
Sbjct: 594 AVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGF 653
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G++ A +L E + PN YS+++ G + N+E A L +RM +EGI D
Sbjct: 654 CRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDL 713
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ LISGL K+GK+ +L M KG P+ +Y +++GL +K + A++++
Sbjct: 714 QIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILED 773
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + M+P+ Y LI G + +++ + +M+ +G VP
Sbjct: 774 MDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVP 816
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 137/291 (47%), Gaps = 3/291 (1%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N + T ++ + D+ ++ ++ +C + Y VI + G + KA E
Sbjct: 328 NVVVATTLMKGYCKQGDLDSALELFDKMNENGIC--PNNVTYAVIIEWCCKNGNMDKAYE 385
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
M + + P+V N ++ + A+ E ++ A G+ + N LL LC
Sbjct: 386 IYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLC 444
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G + A + ++ ++ P+V +Y+ ++ G C++G+++ A G+ M +G+ + +
Sbjct: 445 KEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLI 504
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+++L+ G K+G E L +RM+G+ P+ + ++ GL R E+++ + ++
Sbjct: 505 TYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKL 564
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ E P+ ++Y +I G + V V +M + G P + + ++
Sbjct: 565 VQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLI 615
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 119/261 (45%), Gaps = 6/261 (2%)
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
C ++ F YN + + G++S+A M PSV ++N N+++ G++
Sbjct: 428 CGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYN---NMILGHCQQGDM 484
Query: 183 ---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
G++ + G++ + ++L+ G + G+ E AF + D +N P+ T + +
Sbjct: 485 DSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNII 544
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
++GLC+ G E+ L+++ EG +T+N +I G K+G V + + M G
Sbjct: 545 INGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGV 604
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
PN +Y ++ G A +++ M + + Y LI G C + + +
Sbjct: 605 SPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQ 664
Query: 360 VLKKMVQQGFVPRMGMWREIV 380
+L ++ + G P ++ ++
Sbjct: 665 LLSELQEVGLSPNKVVYSSMI 685
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 158/371 (42%), Gaps = 58/371 (15%)
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIE--------DIMQRIKVEK 121
P V++ L + S+R D+ + ++ ++N + KR DA++ DI+ + V
Sbjct: 134 PSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMN 193
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
+ F ++K NM I +A + M S T ++++ + E
Sbjct: 194 I------FLSELVK--NNM---IREARDVYNKMASKGVKGDCATISVMIRASMREGKLEE 242
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP---------- 231
+G + A GVE+DA +I+++ +C+ + AA +L E + P
Sbjct: 243 AEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIG 302
Query: 232 -------------------------NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
NV +TLM G C++G+++ A L ++M GI
Sbjct: 303 VCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICP 362
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ VT+ ++I K G +++ ++ +MK K P + ++ G L + EA +L
Sbjct: 363 NNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLF 422
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV--GCVT 384
+ ++ F +Y L+ LC + + + + +KMV++G P + + ++ C
Sbjct: 423 DEAVACGIANVF-TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQ 481
Query: 385 FGKDNRNRVYV 395
D+ N V+V
Sbjct: 482 GDMDSANGVFV 492
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 18/249 (7%)
Query: 73 SVISVLNQYSK--RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK-------VEKLC 123
SV S L Y++ + +PN YT +IN ++ D +M +K V C
Sbjct: 588 SVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYC 647
Query: 124 RFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
DGF G + A + L ++ P+ ++ +++ +
Sbjct: 648 ALIDGFCRK---------GDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAAL 698
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
++ G+ D L+ GL + G L A + E + P++ TYS L+HGL
Sbjct: 699 HLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGL 758
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C KG +E A +LE M+ + + +N LI+G K+G ++E +L M KG P+
Sbjct: 759 CNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDD 818
Query: 304 ASYQEVLYG 312
+Y ++ G
Sbjct: 819 TTYDILVNG 827
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 7/116 (6%)
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
LL +++LY E+ AK G+ D ++L+ GLC G LE A +L++ ++ P
Sbjct: 729 LLFASELYAEM------LAK-GIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTP 781
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
V Y+TL+ G ++GN++EAF L M +G+ D T++IL++G K G + G
Sbjct: 782 TVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNLFSG 837
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 127/265 (47%), Gaps = 14/265 (5%)
Query: 130 FYNVIKI--------YGNMAGRISK------AIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
FY +++I +G G +K + M + +V + N+++N L
Sbjct: 81 FYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCR 140
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ KLG+ DA N L+ GLC G ++ A + +E K+ EPNV +
Sbjct: 141 LNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVIS 200
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y+T+++GLC+ GN A + ++ME G + VT++ +I L K V + M+ L M
Sbjct: 201 YTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMV 260
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+G PN +Y +++G + + EA L M+ + P+ V++ L+ GLC + +V
Sbjct: 261 ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVS 320
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
+ V + M ++G P + + ++
Sbjct: 321 EARLVFETMTEKGVEPDISTYNALM 345
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 114/230 (49%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +S+A M P + T+N +++ +L E + ++ + G A
Sbjct: 317 GMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSY 376
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ G C++ ++ A +L E + P+ TYSTLM GLC+ G +EA L + M S
Sbjct: 377 NILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCS 436
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + VT+ IL+ G K G ++E +KLL+ MK K PN Y ++ G+ +
Sbjct: 437 YGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEV 496
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
AKEL ++ + P +Y +I GL + L ++ + +KM GF+P
Sbjct: 497 AKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 546
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 113/233 (48%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G S A++ M C P+V T++ +++ L +L + + + G+ +
Sbjct: 211 TGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFT 270
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ G C G L A + E ++ PN T++ L+ GLC++G V EA + E M
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMT 330
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G++ D T+N L+ G Q + E K+ E M KGC P + SY ++ G +R
Sbjct: 331 EKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMD 390
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EAK L+ M + ++P V+Y L+ GLC ++ + K+M G P +
Sbjct: 391 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNL 443
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ + + M N PSV F L K Y + + V + LNI
Sbjct: 74 VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ LC +++ + VL + K P+ T++ L++GLC +G ++EA L M G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + +++ +I+GL K G + + ++M+ GC PN +Y ++ L + +A
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E + M+ + P+ +Y ++HG CN + + + K+MV + +P
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMP 301
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 161/363 (44%), Gaps = 36/363 (9%)
Query: 52 HKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIE 111
H D ++ ++ N + + N+ KR + PN YT +IN L +
Sbjct: 160 HPDAITFNALINGLCNEGKIKEAVELFNEMVKR-GHEPNVISYTTVINGLCKTGNTSMAV 218
Query: 112 DIMQRIK--------------VEKLCR---FSDG----------------FFYN-VIKIY 137
D+ ++++ ++ LC+ +D F YN ++ +
Sbjct: 219 DVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGF 278
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
N+ G++++A +M + P+ TF ++++ L + E + ++ + + GVE D
Sbjct: 279 CNL-GQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPD 337
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+ G C + A V + ++ C P +Y+ L++G C+ ++EA LL
Sbjct: 338 ISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLA 397
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M + ++ DTVT++ L+ GL + G+ +E + L + M G +PN +Y +L G
Sbjct: 398 EMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHG 457
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
EA +L+ M +++ P+ V Y LI G+ +E + K+ G P + +
Sbjct: 458 HLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYT 517
Query: 378 EIV 380
++
Sbjct: 518 VMI 520
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 138/297 (46%), Gaps = 4/297 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+D PN +T++++ L + + + + EK D YN + + G R+
Sbjct: 297 RDVMPNTVTFTILVDGLCKEGMVSEARLVFETM-TEKGVE-PDISTYNAL-MDGYCLQRL 353
Query: 145 SKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +F+ M C P ++N+++N ++ E + + + D +
Sbjct: 354 MNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYST 413
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++GLC+ G + A + E PN+ TY L+ G C+ G+++EA LL+ M+ +
Sbjct: 414 LMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKK 473
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
++ + V + ILI G+ GK+E +L ++ G G P+ +Y ++ GLL + EA
Sbjct: 474 LEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAY 533
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+L +M + P+ SY +I G + ++ +MV + F + ++ ++
Sbjct: 534 DLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 158/314 (50%), Gaps = 4/314 (1%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
LS ++ K+ + P S +++ + S++ Y + ++ LI+ +L+ K + I++
Sbjct: 8 LSARQLFKLLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVE 67
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFNLVLNLLV 174
IK +K C+ ++ V+K Y + ++A++ M + C P ++++N +LN +
Sbjct: 68 LIKTQK-CKCTEDVVLTVLKAYAK-SKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFI 125
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
A L + + +G+ + NIL+K + A +LD ++ +P+V
Sbjct: 126 EANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVY 185
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
+Y T+++G+ + G++ A + + M G+ D + +NI+I G K+G +G ++ ER+
Sbjct: 186 SYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERL 245
Query: 295 -KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
KG YPN +Y ++ GL RF E+ E+ RM +Y LI GLC+
Sbjct: 246 VKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGN 305
Query: 354 VEDVDWVLKKMVQQ 367
V+ V K+MV++
Sbjct: 306 VDGAVEVYKEMVKR 319
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 147/320 (45%), Gaps = 34/320 (10%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK-----------LCRFSD-GFFYNVIKI 136
PN Y ++IN L + RFD ++ +R+K + +C D G +++
Sbjct: 253 PNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEV 312
Query: 137 YGNM---------------------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
Y M AG+I ++ E M NC +V ++N+ + L
Sbjct: 313 YKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENC-HNVVSYNIFIRGLFE 371
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ E ++ + G D+ +L+ GLC+NG+L A +L E + +
Sbjct: 372 NRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFA 431
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
YS+++ GL ++G V+EA G++ +M+ G + N LI+G + K+EE + M+
Sbjct: 432 YSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREME 491
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
KGC P SY ++ GL +RF +A V M+ + P ++Y L+ GLC K ++
Sbjct: 492 TKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKID 551
Query: 356 DVDWVLKKMVQQGFVPRMGM 375
+ ++++ +G P + M
Sbjct: 552 MALNLWRQVLVKGLEPDVTM 571
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 142/324 (43%), Gaps = 12/324 (3%)
Query: 64 IFSN--LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--V 119
+F N + + ISV +L +R+ + Y ++I+ L + + I++ K
Sbjct: 369 LFENRKVEEAISVWELL----RRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGG 424
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
+KL D F Y+ I + GR+ +A+ + M Y C S N ++N V A
Sbjct: 425 DKL----DAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKL 480
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
E + G N L+ GLC+ A+ + E +++ +P++ TYS L
Sbjct: 481 EEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLL 540
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
M GLC+ ++ A L ++ +G++ D NIL+ GL GK+E+ + L MK C
Sbjct: 541 MDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNC 600
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
PN ++ ++ GL + A + M P +SY + GLC+ + D
Sbjct: 601 LPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIA 660
Query: 360 VLKKMVQQGFVPRMGMWREIVGCV 383
+ ++ G +P W +V V
Sbjct: 661 LFDDALKNGILPTSITWYILVRAV 684
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 154/366 (42%), Gaps = 86/366 (23%)
Query: 85 KDYNPNEALYTLIINKLAQA----KRFDAIEDIMQRIKVEKLCRFS---DGFFYNVIKIY 137
KD P+ Y +IN + ++ + +++ +R V + ++ DGFF
Sbjct: 178 KDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKR----- 232
Query: 138 GNMAGRISKAIETLFDMPSYNC-WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G + E + +C +P+V T+N+++N L + E ++ K E+
Sbjct: 233 ----GDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEM 288
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF--- 253
D + L+ GLC+ GN++ A V E K++ +V TY+ L++G C G ++E+F
Sbjct: 289 DLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW 348
Query: 254 -------------------GLLERMESE------------GIDADTVTFNILISGLRKQG 282
GL E + E G AD+ T+ +LI GL K G
Sbjct: 349 VMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNG 408
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM----------ICE 332
+ + +K+L+ K G ++ +Y ++ GL + R EA +V +M +C
Sbjct: 409 HLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCN 468
Query: 333 RM-------------------------SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ SP+ VSY LI+GLC + D +K+M+++
Sbjct: 469 PLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEK 528
Query: 368 GFVPRM 373
+ P M
Sbjct: 529 DWKPDM 534
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A R S A + +M + P + T++L+++ L K ++ G+E D
Sbjct: 512 AERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTM 571
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ GLC G +E A + + NC PN+ T++TLM GL + E A + M
Sbjct: 572 HNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMF 631
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
G D +++NI + GL G++ +G+ L + G P S ++ ++ +L
Sbjct: 632 KNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVL 685
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD+ P+ Y+L+++ L Q K+ D ++ +++ V+ L D +N++ AG+I
Sbjct: 528 KDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGL--EPDVTMHNILMHGLCSAGKI 585
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+ +M NC P++ T N +++ L A+ I+ K G + D NI
Sbjct: 586 EDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNIT 645
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
LKGLC G + + D+ K P T+ L+ + + G ++
Sbjct: 646 LKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLD 691
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 1/153 (0%)
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE-GIDADTVTFNILISGL 278
+++ Q C+ T++ + EA ++ME G ++N L++
Sbjct: 65 IVELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAF 124
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
+ +E+ L + G PN +Y ++ + K++F EAK L+ M + + P
Sbjct: 125 IEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDV 184
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
SY +I+G+ + V +M ++G VP
Sbjct: 185 YSYGTVINGMVKSGDLVSALEVFDEMFERGLVP 217
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 14/297 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------ 140
+ P+ A +T +I L + + ++ +GF N + YG +
Sbjct: 140 HQPDTATFTTLIRGLCVEGKIGEALHLFDKM-------VGEGFQPNGVT-YGTLIHGLCK 191
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G AI L M NC P+V T+N +++ L + E I++ G+ +
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ GLC+ + +++E PNV ++TL+ LC++G V A +++ M
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G++ D VT+ L+ G + +++E K+ + M KGC PN SY ++ G +R
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+A L M + P+ V+Y LIHGLC+ + D + +MV G +P + +R
Sbjct: 372 KAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYR 428
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 6/251 (2%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I +A+ + M PSV F +L + + K Y + + LG+ D L I
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C ++ F VL + K +P+ T++TL+ GLC +G + EA L ++M EG
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+ LI GL K G ++LL M K C PN +Y ++ L ++ EA
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV--- 380
+ MI + +SP+ +Y +IHGLC + V ++ +MV +P + ++ +V
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294
Query: 381 ---GCVTFGKD 388
G VT D
Sbjct: 295 CKEGMVTIAHD 305
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 2/208 (0%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
KLG + D L++GLC G + A ++ D+ + +PN TY TL+HGLC+ GN
Sbjct: 137 KLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSR 196
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A LL M + + + +T+N +I L K +V E + + M KG PN ++Y ++
Sbjct: 197 AAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSII 256
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+GL + L+ M+ ++ P+ V + L+ LC + +V V+ M+Q+G
Sbjct: 257 HGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVE 316
Query: 371 PRMGMWREIVG--CVTFGKDNRNRVYVT 396
P + + ++ C+ D ++V+ T
Sbjct: 317 PDVVTYTALMDGHCLRSEMDEADKVFDT 344
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 135/296 (45%), Gaps = 4/296 (1%)
Query: 78 LNQYSK--RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
LN +S+ K +PN + Y II+ L + + + +M + K+ + + +
Sbjct: 234 LNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKI--MPNVVIFTTLV 291
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
G ++ A + + M P V T+ +++ E ++ + + G
Sbjct: 292 DALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCA 351
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+ + L+ G C+ ++ A Y+ +E ++ PN+ TY+TL+HGLC G + +A L
Sbjct: 352 PNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIAL 411
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
M + G D VT+ IL+ L K +++ M +L+ ++G P+ SY V+ G+
Sbjct: 412 FHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCR 471
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A +L + + + P +Y +I+GLC Q L+ + + ++M G P
Sbjct: 472 VGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSP 527
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 134/294 (45%), Gaps = 2/294 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ PN Y +I+ L + A ++ R V+K C + YN I ++++
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLL-RSMVQKNCE-PNVITYNTIIDCLFKDRQVNE 232
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ +M + P+V T+N +++ L + + + + + L+
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVD 292
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G + A V+D ++ EP+V TY+ LM G C + ++EA + + M +G
Sbjct: 293 ALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAP 352
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ ++++ LI+G K ++++ M L E M + PN +Y +++GL R +A L
Sbjct: 353 NVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALF 412
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ P V+Y+ L+ LC + ++ +LK + P + + ++
Sbjct: 413 HEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVI 466
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 124/283 (43%), Gaps = 2/283 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ P+ YT +++ D + + + V K C + + +I Y + R
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTM-VRKGCAPNVISYSTLINGYCKIQ-R 369
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I KA+ +M P++ T+N +++ L + ++ G D I
Sbjct: 370 IDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRI 429
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL LC+ +L+ A +L N P++++Y+ ++ G+C G +E A L + S+G
Sbjct: 430 LLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG 489
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D T+ I+I+GL QG + E KL M GC P+ +Y + G L A
Sbjct: 490 LHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAI 549
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+L+ M+ S + ++ L + L + V +L + VQ
Sbjct: 550 QLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 135/301 (44%), Gaps = 13/301 (4%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
V +++N+ K PN ++T +++ L + D++ + +++ G +V
Sbjct: 268 VATLMNEMVDSK-IMPNVVIFTTLVDALCKEGMVTIAHDVVD-VMIQR------GVEPDV 319
Query: 134 IKIYGNMAGRISKA----IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+ M G ++ + +FD M C P+V +++ ++N + + ++
Sbjct: 320 VTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEE 379
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ + + N L+ GLC G L A + E P++ TY L+ LC+ +
Sbjct: 380 MCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRH 439
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+++A +L+ +E + D ++NI+I G+ + G++E L + KG +P+ +Y
Sbjct: 440 LDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTI 499
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ GL + EA +L M + SP +Y + G +L++M+ +G
Sbjct: 500 MINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRG 559
Query: 369 F 369
F
Sbjct: 560 F 560
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS FN +L + K Y + + G+ D LNIL+ C AF V
Sbjct: 65 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K +P+ T++TL+ GLC +G + +A L ++M EG + VT+ LI+GL K
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++LL M+ C P+ Y ++ L ++ EA L +M+ + +SP +
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LIH LCN + V +L +M+ +P + ++ +V
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVV 284
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 147/320 (45%), Gaps = 17/320 (5%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL-AQAKRFDAIEDIMQRIKVEKLC 123
F +L P SVL + K P+ A +T +I L + K DA+ + I
Sbjct: 112 FCHLNRPGFAFSVLAKILKLG-LQPDTATFTTLIRGLCVEGKIGDALHLFDKMI------ 164
Query: 124 RFSDGFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
+GF NV+ YG + G + AI L M NC P V + +++ L +
Sbjct: 165 --GEGFQPNVVT-YGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDR 221
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
E +++ G+ D L+ LC + +L++ P+V +S
Sbjct: 222 QVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFS 281
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
T++ LC++G + EA +++ M G++ + VT+N L+ G Q +++E +K+ + M
Sbjct: 282 TVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHN 341
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G PN SY ++ G +R +A L M + + P+ V+Y L+HGLC+ ++D
Sbjct: 342 GYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDA 401
Query: 358 DWVLKKMVQQGFVPRMGMWR 377
+ +MV G +P + +R
Sbjct: 402 IALFHEMVAHGQIPDLATYR 421
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 115/245 (46%), Gaps = 2/245 (0%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ P V T N+++N G + KLG++ D L++GLC G
Sbjct: 93 MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A ++ D+ + +PNV TY TL++GLC+ GN A LL ME D V +
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I L K +V E L +M G+G P+ +Y +++ L + + L+ +MI +
Sbjct: 213 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 272
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRN 391
+ P V + ++ LC + + + V+ M+ +G P + + ++ C+ D
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 332
Query: 392 RVYVT 396
+V+ T
Sbjct: 333 KVFDT 337
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 115/245 (46%), Gaps = 5/245 (2%)
Query: 127 DGFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
+G+ NVI + G R+ KA +M P+ T+N +++ L +
Sbjct: 341 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQD 400
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
++ G D ILL LC+ +L+ A +L N +P+++ Y+ ++
Sbjct: 401 AIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVID 460
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
G+C G +E A + + S+G+ + T+ I+I+GL ++G ++E KL M G GC P
Sbjct: 461 GMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSP 520
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ +Y + GLL K A +L+ M+ S + L+ LC+ KL + V +L
Sbjct: 521 DGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 580
Query: 362 KKMVQ 366
+ VQ
Sbjct: 581 SEFVQ 585
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 141/300 (47%), Gaps = 4/300 (1%)
Query: 74 VISVLNQYSKR--KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
V N +SK + +P+ YT +I+ L + + ++ ++ K+ D +
Sbjct: 223 VTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKI--MPDVVIF 280
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ + G+I++A + + M P+V T+N +++ E ++ +
Sbjct: 281 STVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 340
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G + N L+ G C+ ++ A Y+ +E ++ PN TY+TLMHGLC G +++
Sbjct: 341 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQD 400
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A L M + G D T+ IL+ L K+ ++E M LL+ ++G P+ Y V+
Sbjct: 401 AIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVID 460
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G+ A+++ + + + P+ +Y +I+GLC + L+++ + + +M G P
Sbjct: 461 GMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSP 520
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 2/221 (0%)
Query: 161 PSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P TF L+ L V K+ G+ ++ G + + L+ GLC+ GN AA
Sbjct: 135 PDTATFTTLIRGLCVEGKI-GDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIR 193
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+L + NC+P+V Y++++ LC+ V EAF L +M +GI D T+ LI L
Sbjct: 194 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLC 253
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
+ + LL +M P+ + V+ L + + EA ++V MI + P+ V
Sbjct: 254 NLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVV 313
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+Y L+ G C Q +++ V MV G+ P + + ++
Sbjct: 314 TYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 354
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 146/322 (45%), Gaps = 15/322 (4%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + T ++ NL + V ++LNQ K P+ +++ +++ L + + D+
Sbjct: 241 DIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK-IMPDVVIFSTVVDALCKEGKITEAHDV 299
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGR-----ISKAIETLFDMPSYNCW-PSVKTFN 167
+ + + G NV+ M G + +A++ +FD +N + P+V ++N
Sbjct: 300 VDMMIIR-------GVEPNVVTYNALMDGHCLQSEMDEAVK-VFDTMVHNGYAPNVISYN 351
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
++N + + ++ + + + N L+ GLC G L+ A + E
Sbjct: 352 TLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAH 411
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
P++ TY L+ LC+K +++EA LL+ +E +D D + I+I G+ + G++E
Sbjct: 412 GQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAA 471
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+ + KG PN +Y ++ GL + EA +L M SP +Y + G
Sbjct: 472 RDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQG 531
Query: 348 LCNQKLVEDVDWVLKKMVQQGF 369
L K +L++M+ +GF
Sbjct: 532 LLQNKEALRAIQLLQEMLARGF 553
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 111/244 (45%), Gaps = 2/244 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN Y +IN + +R D + + + ++L + YN + GR+
Sbjct: 343 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKEL--IPNTVTYNTLMHGLCHVGRLQD 400
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
AI +M ++ P + T+ ++L+ L E + + ++ D I++
Sbjct: 401 AIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVID 460
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G+C G LEAA + + PNVRTY+ +++GLC +G ++EA L M+ G
Sbjct: 461 GMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSP 520
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T+N + GL + + ++LL+ M +G + ++ ++ L D K K+++
Sbjct: 521 DGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 580
Query: 327 GRMI 330
+
Sbjct: 581 SEFV 584
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 132/294 (44%), Gaps = 6/294 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY-NVIKIYGNMAGRISKA 147
P+ +YT II+ L + ++ ++ ++ + + D F Y ++I N+ K
Sbjct: 205 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGIS--PDIFTYTSLIHSLCNLCEW--KH 260
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
+ TL + M + P V F+ V++ L E + GVE + N L+
Sbjct: 261 VTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMD 320
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C ++ A V D PNV +Y+TL++G C+ +++A L E M + +
Sbjct: 321 GHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP 380
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+TVT+N L+ GL G++++ + L M G P+ A+Y+ +L L K EA L+
Sbjct: 381 NTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALL 440
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ M P Y +I G+C +E + + +G P + + ++
Sbjct: 441 KTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMI 494
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 1/142 (0%)
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+++A RM TV FN L++ + K + L +M G P+ +
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ R A ++ +++ + P ++ LI GLC + + D + KM+ +G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167
Query: 369 FVPRMGMWREIV-GCVTFGKDN 389
F P + + ++ G G N
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTN 189
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 154/356 (43%), Gaps = 25/356 (7%)
Query: 20 SSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTE-----VLKIFSNLRDPISV 74
+S + R R FAL ++ H+D + PT + L
Sbjct: 132 ASQGGLPRARRFALYR-------------RMVHRDRVPPTTFTFGVAARALCRLGRADEA 178
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+++L + R P+ LY +I+ L ++ + + C F +V+
Sbjct: 179 LALLRGMA-RHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG-CAADVNTFDDVV 236
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+ + GR+ +A + M + C P V T+ +L L + E + + +L V
Sbjct: 237 RGMCGL-GRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNV 295
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ N ++ G G L A + + + C+P+ TYS LMHGLC+ G + A
Sbjct: 296 VL----FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVR 351
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL ME +G + VT+ I++ K G ++ LLE M KG NS Y ++Y L
Sbjct: 352 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 411
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
R EA L+ M + +P SY +I+ LCN + +E+ + + + ++++G V
Sbjct: 412 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 467
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 147/291 (50%), Gaps = 3/291 (1%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
S + +L + K K + PN YT++++ + +D +++ + + L S G+
Sbjct: 348 SAVRLLREMEK-KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 406
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ + + GR+ +A+ + +M S C P + ++N ++ L + + E + ++ + +
Sbjct: 407 IYALCKD--GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 464
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GV + N ++ L +G + A + E C +V +Y+ L+ +C+ GNV+ +
Sbjct: 465 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 524
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LLE M +GI + V++NILIS L K+ +V + ++L ++M +G P+ +Y ++ G
Sbjct: 525 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 584
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
L A L+ ++ E + P ++Y LI C +L++D +L +
Sbjct: 585 LCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 635
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 139/277 (50%), Gaps = 3/277 (1%)
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM 154
T+I LA+ K +A E + K C+ D Y+++ GRI A+ L +M
Sbjct: 300 TVIGGCLAEGKLAEATE--LYETMGLKGCQ-PDAHTYSILMHGLCKLGRIGSAVRLLREM 356
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
P+V T+ +VL+ ++ + + + + G+ +++ N ++ LC++G +
Sbjct: 357 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 416
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A ++ E Q C P++ +Y+T+++ LC +EEA + E + EG+ A+ +T+N +
Sbjct: 417 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 476
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I L + G+ ++ ++L + M GC + SY ++ + + L+ M + +
Sbjct: 477 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 536
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P+ VSY LI LC ++ V D + K+M+ QG P
Sbjct: 537 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAP 573
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 127/311 (40%), Gaps = 36/311 (11%)
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCW 160
L +A+RF ++ R +V F + V GR +A+ L M + C
Sbjct: 137 LPRARRFALYRRMVHRDRVPPTT-----FTFGVAARALCRLGRADEALALLRGMARHGCV 191
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + V++ L E + +G D + +++G+C G + A +
Sbjct: 192 PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARL 251
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCE-------------------------------KGNV 249
+D + C P V TY L+ GLC +G +
Sbjct: 252 VDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKL 311
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EA L E M +G D T++IL+ GL K G++ ++LL M+ KG PN +Y V
Sbjct: 312 AEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIV 371
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L+ + + + L+ M + ++ + Y +I+ LC +++ ++++M QG
Sbjct: 372 LHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGC 431
Query: 370 VPRMGMWREIV 380
P + + I+
Sbjct: 432 NPDICSYNTII 442
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 2/222 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q + + NP+ Y II L ++ + E + + + E + ++G YN I
Sbjct: 422 LIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV--VANGITYNTIIHA 479
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
GR A+ +M + C V ++N ++ + + A+ G++ +
Sbjct: 480 LLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPN 539
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
NIL+ LC+ + A + + Q P++ TY+TL++GLC+ G + A LLE
Sbjct: 540 NVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLE 599
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
++ +E + D +T+NILIS K +++ LL R C
Sbjct: 600 KLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 641
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
+ P T+ LC G +EA LL M G D V + +I L QG V
Sbjct: 152 RDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVT 211
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
E LL M GC + ++ +V+ G+ R EA LV RM+ + P ++Y L+
Sbjct: 212 EAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 271
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
GLC + ++ +L ++ + V ++ ++ GC+ GK
Sbjct: 272 QGLCRVRQADEARAMLGRVPELNVV----LFNTVIGGCLAEGK 310
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDA---IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
++ P + +IN ++ D ++ M +V F D F Y+V+
Sbjct: 253 KRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRV-----FPDVFTYSVLINGLCK 307
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ A + +M P+ TF ++N IY + GV+ D
Sbjct: 308 EGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVIT 367
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ GLC+ G+L A ++ E ++ +P+ TY+ L+ G C++G++E A + + M
Sbjct: 368 YNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMV 427
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
EGI+ D V F LISG ++G+V E + L M G P+ A+Y V++G K
Sbjct: 428 KEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVK 487
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L+ M C+ P V+Y L++GLC Q +++ + +L M+ G VP
Sbjct: 488 TGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVP 538
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V FN++++ L E Q ++ K G+ N L+ G C++GNL+ F +
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL 282
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ P+V TYS L++GLC++G +++A L M G+ + VTF LI+G
Sbjct: 283 KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ + GM++ ++M KG P+ +Y ++ GL EAK+LV M + P +
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
Y LI G C + +E + K+MV++G
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEG 430
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 143/332 (43%), Gaps = 16/332 (4%)
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
P S++S S + + + Y + + L K + ++Q + K + F
Sbjct: 83 PPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVF 142
Query: 131 YNVIKIYGNM---------------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
+V++ G +G S AI+ + +N + + + L+
Sbjct: 143 TSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMK 202
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
L Y G D C N+L+ LC+ + A + E K+ P V +
Sbjct: 203 LNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVS 262
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
++TL++G C+ GN+++ F L M + D T+++LI+GL K+G++++ KL M
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC 322
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+G PN ++ ++ G R E+ +M+ + + P ++Y LI+GLC +
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLR 382
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
+ ++ +M Q+G P + ++ GC G
Sbjct: 383 EAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEG 414
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 2/257 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++IN L + + D + + L +D F +I + + GR +
Sbjct: 293 PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP-NDVTFTTLINGHC-VTGRADLGM 350
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M P V T+N ++N L E + + + G++ D +L+ G
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC 410
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G+LE+A + E K+ E + ++ L+ G C +G V EA L M GI D
Sbjct: 411 CKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDD 470
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+ ++I G K+G V+ G KLL+ M+ G P +Y +L GL + + A L+
Sbjct: 471 ATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDA 530
Query: 329 MICERMSPSFVSYKKLI 345
M+ + P ++Y L+
Sbjct: 531 MLNLGVVPDDITYNILL 547
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P YT++I + +++ + L D + YN I G + +A
Sbjct: 215 PTVITYTILIEATIVEGGINEAMKLLEEMLARGL--LPDMYTYNAIIRGMCKEGMVERAA 272
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E + + S C P V ++N++L ++ + E + + G E + +IL+ L
Sbjct: 273 ELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 332
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G ++ A VL ++ P+ +Y L+ LC++G ++ A G+++ M S G D
Sbjct: 333 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 392
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +N +++ L K G + +++ +++G GC PN +SY ++ L A +V
Sbjct: 393 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 452
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
MI + + P ++Y LI LC LVE+ +L M Q GF P
Sbjct: 453 MISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRP 495
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V +N V++ + G D NI++ LC L A V
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
LD+ NC P V TY+ L+ +G + EA LLE M + G+ D T+N +I G+ K
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G VE +L+ + KGC P+ SY +L L++ ++ E ++LV M P+ V+
Sbjct: 265 EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LI LC +++ VLK M+++ P
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTP 355
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 135/297 (45%), Gaps = 3/297 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K Y P+ L T +I K + +M+ ++ D F YN + +I
Sbjct: 107 KGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT---EPDVFAYNAVISGFCKVNQI 163
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + L M + P + T+N+++ L + + G + IL
Sbjct: 164 EAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTIL 223
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++ G + A +L+E + P++ TY+ ++ G+C++G VE A L+ + S+G
Sbjct: 224 IEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGC 283
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ D +++NIL+ QGK +EG KL+ M +GC PN +Y ++ L R EA
Sbjct: 284 EPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAIS 343
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
++ MI + ++P SY LI LC + ++ ++ M+ G +P + + I+
Sbjct: 344 VLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILA 400
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 106/232 (45%), Gaps = 16/232 (6%)
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
I + LCRF GRI +AI L M P +++ +++ L
Sbjct: 327 ILISSLCRF----------------GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 370
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
GI G D N +L LC+NGN A + ++ C PNV +Y
Sbjct: 371 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 430
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+T++ L G+ A G++ M S+GID D +T+N LIS L + G VEE + LL+ M+
Sbjct: 431 NTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 490
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
G P SY VL GL +R +A + MI + P+ +Y LI G+
Sbjct: 491 SGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 144/318 (45%), Gaps = 11/318 (3%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
F N+ V+ +L +++ P+ Y +I+ + + +A ++ R+K
Sbjct: 126 FKNIEKASRVMEILESHTE-----PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGF-- 178
Query: 125 FSDGFFYNVIKIYGNMAGR--ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
D YN++ G++ R + A+ L + NC P+V T+ +++ + E
Sbjct: 179 LPDIVTYNIM--IGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEA 236
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ G+ D N +++G+C+ G +E A ++ + CEP+V +Y+ L+
Sbjct: 237 MKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRA 296
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
+G +E L+ M S G + + VT++ILIS L + G+++E + +L+ M K P+
Sbjct: 297 FLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPD 356
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+ SY ++ L + R A ++ MI P V+Y ++ LC +
Sbjct: 357 TYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFN 416
Query: 363 KMVQQGFVPRMGMWREIV 380
K+ G P + + ++
Sbjct: 417 KLRGMGCPPNVSSYNTMI 434
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 6/226 (2%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
F + + ISV+ V+ + K+ P+ Y +I+ L + R D IM + + C
Sbjct: 335 FGRIDEAISVLKVMIE----KELTPDTYSYDPLISALCKEGRLDLAIGIMDYM-ISNGC- 388
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
D YN I G ++A+E + C P+V ++N +++ L S G
Sbjct: 389 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 448
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ + G++ D N L+ LC +G +E A +LD+ + P V +Y+ ++ GLC
Sbjct: 449 MVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 508
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
+ +++A G+ M +G + T+ +LI G+ G E M+L
Sbjct: 509 KVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 554
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 90/177 (50%), Gaps = 1/177 (0%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL C+ G + Y L+ + P+V + L+ G N+E+A ++E +ES
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH- 142
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D +N +ISG K ++E ++L RMK +G P+ +Y ++ L ++++ A
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ +++ + P+ ++Y LI + + + +L++M+ +G +P M + I+
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 259
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 108/220 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ F +L + K Y + + G+ + LNIL+ C L AF V
Sbjct: 57 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K +PN+ T++TL+ GLC +G + E L ++M EG + VT+ LI+GL K
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++LL M+ C P+ Y ++ L ++ +A L MI + +SPS +
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LIH LCN + V +L +MV +P + ++ +V
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 276
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 135/291 (46%), Gaps = 14/291 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------ 140
+ PN A + +I L + + + ++ +GF NV+ YG +
Sbjct: 125 HQPNIATFNTLIRGLCVEGKIGEVLHLFDKM-------IGEGFQPNVVT-YGTLINGLCK 176
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G S AI L M NC P V + +++ L + + +++ G+
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ LC + +L+E PNV +ST++ LC++G V EA +++ M
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G++ + VT+N L+ G + +++E +K+ + M KG P+ SY ++ G +R
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A L M + + P+ V+Y L+HGLC+ ++D + +MV +G +P
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIP 407
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 2/252 (0%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ P++ T N+++N + G + KLG + + N L++GLC G
Sbjct: 85 MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 144
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ ++ D+ + +PNV TY TL++GLC+ G+ A LL ME D V +
Sbjct: 145 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 204
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I L K +V + L M +G P+ +Y +++ L + + L+ M+ +
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 264
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRN 391
+ P+ V + ++ LC + V + V+ M+++G P + + ++ C+ D
Sbjct: 265 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAV 324
Query: 392 RVYVTETVDSLA 403
+V+ T A
Sbjct: 325 KVFDTMVCKGFA 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 115/230 (50%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A + + M P+V T+N +++ E ++ + G D
Sbjct: 283 GKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSY 342
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L+ G C+ +E A Y+ +E ++ PN TYSTLMHGLC G +++A L M +
Sbjct: 343 STLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVT 402
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D V++ IL+ L K +++E + LL+ ++G P+ Y V+ G+
Sbjct: 403 RGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEA 462
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A++L + + + P+ +Y +I+GLC Q L+ + + +M ++G+ P
Sbjct: 463 ARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSP 512
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 37/265 (13%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ A L + P++ TFN L+ L V K+ GE+ ++ G + +
Sbjct: 109 RLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI-GEVLHLFDKMIGEGFQPNVVTY 167
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC+ G+ AA +L + NC+P+V Y++++ LC+ V +AF L M
Sbjct: 168 GTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIH 227
Query: 262 EGIDADTVTFNILI-----------------------------------SGLRKQGKVEE 286
+GI T+N LI L K+GKV E
Sbjct: 228 QGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVME 287
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+++ M +G PN +Y ++ G + EA ++ M+C+ +P VSY LI+
Sbjct: 288 AHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLIN 347
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
G C + +E ++ ++M ++ +P
Sbjct: 348 GYCKIQRIEKAMYLFEEMCRKELIP 372
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 4/286 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
P+ +YT II+ L + ++ ++ + + + F YN +I N+
Sbjct: 197 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGIS--PSIFTYNSLIHALCNLC-EWKHV 253
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L +M + P+V F+ V++ L E + K GVE + N L+ G
Sbjct: 254 TALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDG 313
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C ++ A V D + P+V +YSTL++G C+ +E+A L E M + + +
Sbjct: 314 HCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPN 373
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TVT++ L+ GL G++++ + L M +G P+ SY +L L +R EA L+
Sbjct: 374 TVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLK 433
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ M P Y +I G+C +E + + +G P +
Sbjct: 434 AIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNV 479
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI KA+ +M P+ T++ +++ L + ++ G D
Sbjct: 354 RIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYC 413
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
ILL LC+N L+ A +L N +P+++ Y+ ++ G+C G +E A L + S+
Sbjct: 414 ILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSK 473
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + T+ I+I+GL +QG + E KL MK KG PN +Y + G L
Sbjct: 474 GLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRG 533
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+L+ M+ S + L+ L + L + V +L + +Q
Sbjct: 534 IQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 9/233 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR---FSDGFFYNVIKIYGNMA 141
K + P+ Y+ +IN + +R IE M E++CR + Y+ +
Sbjct: 333 KGFAPDVVSYSTLINGYCKIQR---IEKAMYLF--EEMCRKELIPNTVTYSTLMHGLCHV 387
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ AI +M + P ++ ++L+ L + E + + ++ D
Sbjct: 388 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 447
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
I++ G+C G LEAA + + PNV TY+ +++GLC++G + EA L M+
Sbjct: 448 TIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKR 507
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+G + T+N++ G + + G++LL+ M +G + S VL +L
Sbjct: 508 KGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG-FSADVSTSTVLVEML 559
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 137/285 (48%), Gaps = 3/285 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y + Y ++I+ L + FD ++ +++++ R Y+ I + R+ +
Sbjct: 41 YTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKR--KAIAYSTIINWLCKLNRVEE 98
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A E + M Y P T+ ++ L K + A G++ DA N +L
Sbjct: 99 ARELIEKMARY-APPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLS 157
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ +E A + ++ KQ PNV TY+TL++GLC+ +E A+ L + M +G
Sbjct: 158 GLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVP 217
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
V++N LI G K+ + + ++M C PN +Y ++ GL + A E++
Sbjct: 218 TEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVL 277
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + ++P+ +Y LI G C + V++ +L++MV QG P
Sbjct: 278 DGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAP 322
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 13/295 (4%)
Query: 83 KRKDYNPNEAL-YTLIINKLAQAKRFD----AIEDIMQR-IKVEKLCRFSDGFFYNVIKI 136
K Y P +AL Y I+ +L + KR D +E++ R IK D F YN +
Sbjct: 105 KMARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIK-------PDAFIYNFVLS 157
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
++ +A M P+V T+N ++N L A ++ A G
Sbjct: 158 GLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVP 217
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
N L+ G C+ +L AA V D+ + NC PNV TY+TL+ GL + G V+ A +L
Sbjct: 218 TEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVL 277
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ M +G+ + T++ LI G K +V+E KLLE+M +G P +Y +L L
Sbjct: 278 DGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRA 337
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +A +L M R P+ V+Y L+ LC+ K ++ + +M+ +G P
Sbjct: 338 DKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPP 392
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 2/276 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +Y +++ L Q ++ + + +++ +++ + YN + A RI A
Sbjct: 147 PDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI--NPNVVTYNTLINGLCKAWRIETAY 204
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E +M P+ ++N +++ K + ++ + + L+ GL
Sbjct: 205 ELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGL 264
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
++G ++AA VLD K+ PNV TYS L+ G C+ V+EA LLE+M ++GI
Sbjct: 265 SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTV 324
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+NIL++ L + K+E+ KL M + C+P +Y +L L K+ A L
Sbjct: 325 VTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAE 384
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
MI + P ++Y L GL V + +++KM
Sbjct: 385 MIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 133/288 (46%), Gaps = 3/288 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P A + + + A+A R + ++++ Q + + G Y ++ G +A
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASG--YGILISCLCKVGNFDEAY 65
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L M ++ ++N L E + + A+ DA +++ L
Sbjct: 66 KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPP-DALTYGPIVERL 124
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ ++ A ++E + +P+ Y+ ++ GLC++ VEEA L E+M + I+ +
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV 184
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N LI+GL K ++E +L + M GKG P SY ++ G KK AK++ +
Sbjct: 185 VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
M+ P+ V+Y LI GL V+ VL MV++G P + +
Sbjct: 245 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 292
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 106/254 (41%), Gaps = 34/254 (13%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P TFN V + A +++ +Y + G + A IL+ LC+ GN + A+ +
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 221 LD----------------------------------EFPKQNCEPNVRTYSTLMHGLCEK 246
L E + P+ TY ++ LC+
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKT 127
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+++A +E M + GI D +N ++SGL ++ KVEE L E+M + PN +Y
Sbjct: 128 KRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTY 187
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL R A EL M + P+ VSY LI G C +K + V KMV+
Sbjct: 188 NTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVR 247
Query: 367 QGFVPRMGMWREIV 380
VP + + ++
Sbjct: 248 SNCVPNVVTYTTLI 261
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K Y P E Y +I+ + K A +D+ ++ V C + Y + + +G++
Sbjct: 213 KGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM-VRSNC-VPNVVTYTTLIDGLSKSGKV 270
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A E L M P+V T++ +++ + E + G+ NIL
Sbjct: 271 QAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNIL 330
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L LC LE AF + ++ C P V TY+TL+ LC ++ A L M ++G
Sbjct: 331 LNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGC 390
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMK 295
D +T++ L GL + GKV E +L+E+MK
Sbjct: 391 PPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 10/253 (3%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NPN Y +IN L +A R + ++ + + + YN + I G + A
Sbjct: 181 NPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGY--VPTEVSYNTL-IDGFCKKKDLVA 237
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDACCLNI 203
+ +FD M NC P+V T+ +++ L + G++Q + K GV + +
Sbjct: 238 AKDVFDKMVRSNCVPNVVTYTTLIDGLSKS---GKVQAAAEVLDGMVKKGVTPNVATYSC 294
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C+ ++ A +L++ Q P V TY+ L++ LC +E+AF L M
Sbjct: 295 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 354
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
VT+N L+ L +++ +L M KGC P++ +Y + +GL + EA+
Sbjct: 355 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 414
Query: 324 ELVGRMICERMSP 336
EL+ +M + +P
Sbjct: 415 ELMEKMKLTKRNP 427
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 145/334 (43%), Gaps = 38/334 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ ++ +I ++ D ++ +K L DG Y ++ AG +S+A+
Sbjct: 295 PDVVSFSCLIGLFSRRGEMDHAGAYLREMK--GLGLVPDGVIYTMVIGGFCRAGSMSEAL 352
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M + C P V T+N +LN L + + + + GV D C L+ G
Sbjct: 353 RVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGY 412
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL------------------------- 243
C GN E A + D +Q P+V TY++L+ G+
Sbjct: 413 CRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNH 472
Query: 244 ----------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
CEKG VE+AFG L+ M +G + T+N +I G + G V++G + L++
Sbjct: 473 ITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQK 532
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M+ +P+ ++ +++G + ++ A + M E + P V+Y +I+G Q
Sbjct: 533 MRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGN 592
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
++D V K M G P + ++ G VT G
Sbjct: 593 MQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAG 626
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 138/295 (46%), Gaps = 2/295 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D N ++++ + FD + ++ ++EK C F D +NV+ AG +
Sbjct: 152 DSEVNAYTLNIMVHSYCKTLEFDGADTVIS--EMEKRCVFPDVVTHNVLIDARFRAGDVD 209
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
AI + M + P + T+N VL L + + + + ++ + + V D NIL+
Sbjct: 210 AAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILI 269
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C G ++ A E + P+V ++S L+ +G ++ A L M+ G+
Sbjct: 270 GGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLV 329
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D V + ++I G + G + E +++ + M G GC P+ +Y +L GL + R +A++L
Sbjct: 330 PDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKL 389
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ M ++P ++ LIHG C Q E+ + +++Q P + + ++
Sbjct: 390 LNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 150/312 (48%), Gaps = 5/312 (1%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
D + I++++ + R P Y ++ L + +RFD +++ + +++ D
Sbjct: 207 DVDAAIALVDSMANRG-LKPGIVTYNSVLKGLCKHRRFDKAKEVFR--TMDQCSVAPDVR 263
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+N++ G + +A++ +M P V +F+ ++ L S + + G Y
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLF-SRRGEMDHAGAYLRE 322
Query: 190 AK-LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
K LG+ D +++ G C G++ A V DE C P+V TY+TL++GLC++
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHR 382
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ +A LL ME G+ D TF LI G +QG E ++L + + + P+ +Y
Sbjct: 383 LLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNS 442
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G+ K +A EL M + P+ ++Y LI C + VED L +MV++G
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKG 502
Query: 369 FVPRMGMWREIV 380
+P + + I+
Sbjct: 503 NLPNIRTYNSII 514
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 125/281 (44%), Gaps = 33/281 (11%)
Query: 89 PNEALYTLIINKLAQAKRF-DA---IEDIMQRIKVEKLCRFS--------DGFFYNVIKI 136
P+ Y ++N L + R DA + ++ +R LC F+ G F N +++
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQL 424
Query: 137 YGNM---------------------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
+ + G ++KA E DM + P+ T++++++
Sbjct: 425 FDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCE 484
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ G K G + N ++KG C +GN++ L + + N P++ T
Sbjct: 485 KGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLIT 544
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
++TL+HG ++ N+ AF + ME E + D VT+N++I+G +QG +++ ++ + M
Sbjct: 545 FNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMG 604
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G P+ +Y ++ G + +A +L MI +P
Sbjct: 605 DSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + F+L++ ++ E + V + A N LL L G A
Sbjct: 85 PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ E N T + ++H C+ + A ++ ME + D VT N+LI +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G V+ + L++ M +G P +Y VL GL +RF +AKE+ M ++P S
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ LI G C V++ K+M + P + + ++G
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIG 305
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%)
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
N +L +L A Q Y E++A LNI++ C+ + A V+ E K
Sbjct: 126 NALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEK 185
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+ P+V T++ L+ G+V+ A L++ M + G+ VT+N ++ GL K + ++
Sbjct: 186 RCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDK 245
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
++ M P+ S+ ++ G EA + M ++P VS+ LI
Sbjct: 246 AKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIG 305
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ ++ L++M G VP ++ ++G
Sbjct: 306 LFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIG 340
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ A L +M P+++T+N ++ + + Q + V D
Sbjct: 486 GQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITF 545
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G + N+ AF V + K+ P+ TY+ +++G E+GN+++A + + M
Sbjct: 546 NTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGD 605
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
GI+ D T+ LI+G G ++ +L + M +G P+
Sbjct: 606 SGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 6/181 (3%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN Y+++I+ + + DA + + +K L + ++IK Y +G + K
Sbjct: 470 PNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRT--YNSIIKGYCR-SGNVKKG 526
Query: 148 IETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
+ L M N +P + TFN L+ + ++G ++ K V DA N+++
Sbjct: 527 QQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFN-VFNIMEKEMVRPDAVTYNMIIN 585
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G E GN++ A V EP+ TY +L++G GN ++AF L + M G
Sbjct: 586 GFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645
Query: 267 D 267
D
Sbjct: 646 D 646
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 150/314 (47%), Gaps = 5/314 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ + V+ F + +L + R P+ YT +++ L + + D ++
Sbjct: 44 DLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEM 103
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
++ +K++ + D F ++ + A ++ +A++ ++ + +C + + ++ L
Sbjct: 104 VREMKLKGV--EPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGL 161
Query: 174 VSAKLYGEIQGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
+ GE ++ + D L+ G C++GNLE A +L + C
Sbjct: 162 CRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCV 221
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PNV TYS+L+HGLC+ G++++A L RM S+G + VT+ LI GL KV+ L
Sbjct: 222 PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL 281
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
++ M C ++ SY +L G R EAK+L M + P ++Y L+ G CN
Sbjct: 282 MDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCN 341
Query: 351 QKLVEDVDWVLKKM 364
+E+ ++L+ M
Sbjct: 342 ASRLEEARFLLENM 355
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 118/242 (48%), Gaps = 5/242 (2%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + +A++ M S C P+V T+ +++ L +A + + D
Sbjct: 237 AGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVS 296
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N LL G C G +E A + E ++C P+ TY+ L+ G C +EEA LLE M+
Sbjct: 297 YNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMK 356
Query: 261 SE-GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ GID D VT++I+++G + + E + ++ M + PN+ +Y ++ GL R
Sbjct: 357 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 416
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A E++ + P V+Y +I GLC E+ +L++MV + P +G + +
Sbjct: 417 NHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSV 472
Query: 380 VG 381
+G
Sbjct: 473 IG 474
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 147/333 (44%), Gaps = 21/333 (6%)
Query: 53 KDWLSPTE-----VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
+++++P E V+ R VL + K P+ Y+ +IN +
Sbjct: 2 REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------GRISKAIETLFDMPSYNCWP 161
D +I++ + DG +V+ Y ++ G++ +A E + +M P
Sbjct: 62 DRACEILREMVTR------DGMAPDVV-TYTSVVDGLCRDGKMDRACEMVREMKLKGVEP 114
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
TF+ ++ +A+ E +Y +DA + L+ GLC + A+ +
Sbjct: 115 DKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELF 174
Query: 222 DEFPKQN---CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
E + +P+V TY+ L+ G C+ GN+E+A +L ME + VT++ L+ GL
Sbjct: 175 QEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGL 234
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G +++ + L RM KGC PN +Y +++GL + A+ L+ M
Sbjct: 235 CKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADT 294
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
VSY L+ G C +E+ + K+M + +P
Sbjct: 295 VSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLP 327
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 12/273 (4%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AGRISKAIET 150
+I L + +R ++ Q +++ + DG + + Y + +G + KA++
Sbjct: 157 LITGLCRERRIGEAYELFQEMEMRE-----DGAWKPDVVTYTALIDGFCKSGNLEKAMKM 211
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
L M C P+V T++ +L+ L A + ++ G + L+ GLC
Sbjct: 212 LGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCA 271
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
++AA ++DE C + +Y+ L+ G C G +EEA L + M ++ D +T
Sbjct: 272 AHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRIT 331
Query: 271 FNILISGLRKQGKVEEGMKLLERMK-GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+ L+ G ++EE LLE MK G P+ +Y V+ G KRF EA E + M
Sbjct: 332 YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 391
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
I ++P+ V+Y LI GLC V VLK
Sbjct: 392 IARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLK 424
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 40/260 (15%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACCLNILLKGLCENGNLEAAFY 219
P+ +T+N+V+N L A+L + + V D + ++ G C+ G ++ A
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66
Query: 220 VLDEF-PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+L E + P+V TY++++ GLC G ++ A ++ M+ +G++ D TF+ LI+G
Sbjct: 67 ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL------------- 325
KV+E +KL + + C ++ S ++ GL ++R EA EL
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186
Query: 326 -------------------------VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
+G M + P+ V+Y L+HGLC ++ +
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246
Query: 361 LKKMVQQGFVPRMGMWREIV 380
++M +G VP + + ++
Sbjct: 247 FRRMTSKGCVPNVVTYTTLI 266
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 129/288 (44%), Gaps = 12/288 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT ++ A R + +++ +K D Y+++ + A R +A
Sbjct: 327 PDRITYTCLVRGFCNASRLEEARFLLENMKTAAGID-PDVVTYSIVVAGYSRAKRFVEAA 385
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E + +M + N P+ T++ +++ L A + + K D I+++GL
Sbjct: 386 EFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGL 441
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C E A +L+E + EP+V T+++++ LC G+++EA+ LL M + G++
Sbjct: 442 CGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGM 501
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA-------SYQEVLYGLLDKKRFPE 321
VT+ L+ G + G++E +L E M+ K +SA ++ ++ GL + +
Sbjct: 502 VTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDK 561
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A +V + P+ ++ GL E+ ++ + + G
Sbjct: 562 AMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 123/247 (49%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 85 SGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 144
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G K R
Sbjct: 205 ASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVD 264
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ RM+ + + P ++Y LI+GLC + ++ + ++ +MV +G P + ++
Sbjct: 265 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLI 324
Query: 381 -GCVTFG 386
GC G
Sbjct: 325 DGCCKEG 331
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 143 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 199
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 200 KSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
KG V+ A + +RM S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 260 KGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKIT 319
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 366 QQGFVPRMGMWREIV 380
G P G + I+
Sbjct: 380 SVGLKPDTGTYTMII 394
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 108/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P T+++++N L + ++ G+ + L+ G C+ G ++ A +
Sbjct: 210 PDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEI 269
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G K
Sbjct: 270 YKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCK 329
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGT 389
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 390 YTMIINEFCKKGDVWKGSRLLKEMQRNGHVP 420
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 209 QPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLV--PNGVTFTTLIDGHCKKGRVDLA 266
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 267 MEIYKRMLSQSLLPDLITYN-----------------------------------TLIYG 291
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ A ++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 292 LCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 351
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G P++ +Y ++ K + L+
Sbjct: 352 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLK 411
Query: 328 RMICERMSPSFVSYKKLIHG 347
M PS V+Y L++G
Sbjct: 412 EMQRNGHVPSVVTYNVLMNG 431
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 108/220 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ F +L + K Y + + G+ + LNIL+ C L AF V
Sbjct: 66 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K +PN+ T++TL+ GLC +G + E L ++M EG + VT+ LI+GL K
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++LL M+ C P+ Y ++ L ++ +A L MI + +SPS +
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LIH LCN + V +L +MV +P + ++ +V
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 285
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 135/291 (46%), Gaps = 14/291 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------ 140
+ PN A + +I L + + + ++ +GF NV+ YG +
Sbjct: 134 HQPNIATFNTLIRGLCVEGKIGEVLHLFDKM-------IGEGFQPNVVT-YGTLINGLCK 185
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G S AI L M NC P V + +++ L + + +++ G+
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ LC + +L+E PNV +ST++ LC++G V EA +++ M
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G++ + VT+N L+ G + +++E +K+ + M KG P+ SY ++ G +R
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A L M + + P+ V+Y L+HGLC+ ++D + +MV +G +P
Sbjct: 366 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIP 416
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 2/252 (0%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ P++ T N+++N + G + KLG + + N L++GLC G
Sbjct: 94 MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 153
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ ++ D+ + +PNV TY TL++GLC+ G+ A LL ME D V +
Sbjct: 154 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 213
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I L K +V + L M +G P+ +Y +++ L + + L+ M+ +
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 273
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRN 391
+ P+ V + ++ LC + V + V+ M+++G P + + ++ C+ D
Sbjct: 274 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAV 333
Query: 392 RVYVTETVDSLA 403
+V+ T A
Sbjct: 334 KVFDTMVCKGFA 345
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 115/230 (50%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A + + M P+V T+N +++ E ++ + G D
Sbjct: 292 GKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSY 351
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L+ G C+ +E A Y+ +E ++ PN TYSTLMHGLC G +++A L M +
Sbjct: 352 STLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVT 411
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D V++ IL+ L K +++E + LL+ ++G P+ Y V+ G+
Sbjct: 412 RGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEA 471
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A++L + + + P+ +Y +I+GLC Q L+ + + +M ++G+ P
Sbjct: 472 ARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSP 521
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 37/265 (13%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ A L + P++ TFN L+ L V K+ GE+ ++ G + +
Sbjct: 118 RLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI-GEVLHLFDKMIGEGFQPNVVTY 176
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC+ G+ AA +L + NC+P+V Y++++ LC+ V +AF L M
Sbjct: 177 GTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIH 236
Query: 262 EGIDADTVTFNILI-----------------------------------SGLRKQGKVEE 286
+GI T+N LI L K+GKV E
Sbjct: 237 QGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVME 296
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+++ M +G PN +Y ++ G + EA ++ M+C+ +P VSY LI+
Sbjct: 297 AHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLIN 356
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
G C + +E ++ ++M ++ +P
Sbjct: 357 GYCKIQRIEKAMYLFEEMCRKELIP 381
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 4/286 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
P+ +YT II+ L + ++ ++ + + + F YN +I N+
Sbjct: 206 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGIS--PSIFTYNSLIHALCNLC-EWKHV 262
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L +M + P+V F+ V++ L E + K GVE + N L+ G
Sbjct: 263 TALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDG 322
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C ++ A V D + P+V +YSTL++G C+ +E+A L E M + + +
Sbjct: 323 HCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPN 382
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TVT++ L+ GL G++++ + L M +G P+ SY +L L +R EA L+
Sbjct: 383 TVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLK 442
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ M P Y +I G+C +E + + +G P +
Sbjct: 443 AIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNV 488
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI KA+ +M P+ T++ +++ L + ++ G D
Sbjct: 363 RIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYC 422
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
ILL LC+N L+ A +L N +P+++ Y+ ++ G+C G +E A L + S+
Sbjct: 423 ILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSK 482
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + T+ I+I+GL +QG + E KL MK KG PN +Y + G L
Sbjct: 483 GLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRG 542
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+L+ M+ S + L+ L + L + V +L + +Q
Sbjct: 543 IQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 9/233 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR---FSDGFFYNVIKIYGNMA 141
K + P+ Y+ +IN + +R IE M E++CR + Y+ +
Sbjct: 342 KGFAPDVVSYSTLINGYCKIQR---IEKAMYLF--EEMCRKELIPNTVTYSTLMHGLCHV 396
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ AI +M + P ++ ++L+ L + E + + ++ D
Sbjct: 397 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 456
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
I++ G+C G LEAA + + PNV TY+ +++GLC++G + EA L M+
Sbjct: 457 TIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKR 516
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+G + T+N++ G + + G++LL+ M +G + S VL +L
Sbjct: 517 KGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG-FSADVSTSTVLVEML 568
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 168/361 (46%), Gaps = 3/361 (0%)
Query: 20 SSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLN 79
+ + I F L +H +K D +S T ++ + ++ + V+ ++
Sbjct: 110 TESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVK 169
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
+ + K PN Y+ II L ++ + E +++ + K F D Y +
Sbjct: 170 EM-QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMM--KRGVFPDHVIYTTLIDGFC 226
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G A + +M + P F+ ++ L + E ++ K G E D
Sbjct: 227 KLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEV 286
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
L+ G C+ G ++ AF++ ++ + PNV TY+ L GLC+ G ++ A LL M
Sbjct: 287 TYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEM 346
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+G+ + T+N +++GL K G + + +KL+E MK G +P++ +Y ++
Sbjct: 347 CRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEM 406
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+A+EL+ M+ + P+ V++ L++GLC +ED + +LK M+++G +P + I
Sbjct: 407 VKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSI 466
Query: 380 V 380
+
Sbjct: 467 M 467
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 150/328 (45%), Gaps = 38/328 (11%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL + KR + P+ +YT +I+ + A + ++ ++ S F + +
Sbjct: 202 VLREMMKRGVF-PDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGL 260
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G +G++ +A + +M P T+ +++ + ++ ++G+
Sbjct: 261 SG--SGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTP 318
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ L GLC++G L+ A +L E ++ + N+ TY+T+++GLC+ GN+ +A L+
Sbjct: 319 NVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLM 378
Query: 257 ERMESEGIDADT-----------------------------------VTFNILISGLRKQ 281
E M+ G+ DT VTFN+L++GL
Sbjct: 379 EEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMS 438
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
GK+E+G +LL+ M KG PN+A+Y ++ + + E+ M + + P +Y
Sbjct: 439 GKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTY 498
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
LI G C + +++ ++ K+MV++ F
Sbjct: 499 NILIKGHCKARNMKEAWFLHKEMVEKRF 526
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 122/246 (49%), Gaps = 6/246 (2%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK-LYGEIQGI 185
D FF +++ AG +++A + + +Y S + NL L L S + + G + +
Sbjct: 43 DVFFQVLVE-----AGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKV 97
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
++ +LGV + NIL+ L G + A ++L + C P+V +Y+T++ G C
Sbjct: 98 FSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCH 157
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G +++ L++ M+ +G+ + T++ +I L K GKV EG K+L M +G +P+
Sbjct: 158 VGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVI 217
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G A +L M + P +++ LI GL V + D + +M+
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI 277
Query: 366 QQGFVP 371
++GF P
Sbjct: 278 KKGFEP 283
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 132/296 (44%), Gaps = 20/296 (6%)
Query: 84 RKDYNPNEALYTLIIN---KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
+K + P+E YT +I+ KL + K+ + + M +I G NV+ Y +
Sbjct: 278 KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQI----------GLTPNVVT-YTAL 326
Query: 141 A------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
A G + A E L +M ++ T+N ++N L A + + + G+
Sbjct: 327 ADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGL 386
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D L+ + G + A +L E + +P V T++ LM+GLC G +E+
Sbjct: 387 HPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGER 446
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL+ M +GI + T+N ++ + + ++ M +G P+S +Y ++ G
Sbjct: 447 LLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHC 506
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ EA L M+ +R + + SY LI G +K + + + ++M ++G V
Sbjct: 507 KARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLV 562
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 37/242 (15%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK N + Y I+N L +A +M+ +K L D Y + G
Sbjct: 348 RKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGL--HPDTITYTTLMDAYYKTGE 405
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKL---------------------YGE 181
+ KA E L +M P+V TFN+++N L +S KL Y
Sbjct: 406 MVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNS 465
Query: 182 IQG-------------IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
I IY GV D+ NIL+KG C+ N++ A+++ E ++
Sbjct: 466 IMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKR 525
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
+Y+ L+ G ++ + EA L E M EG+ A +N+ + ++G +E +
Sbjct: 526 FNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTL 585
Query: 289 KL 290
+L
Sbjct: 586 EL 587
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR-KQGKVEEGM 288
+P+V + L E G + EA +++ + G+ + N+ ++ L K+ + +
Sbjct: 38 DPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVL 95
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
K+ G N+ SY ++ L + EA L+ RM + P VSY +I G
Sbjct: 96 KVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY 155
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C+ ++ V ++K+M +G P + + I+
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSII 187
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 151/335 (45%), Gaps = 22/335 (6%)
Query: 51 NHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKR---------------KDYNPNEALYT 95
N K +LS E +F D ++ +++N Y ++ K P Y
Sbjct: 376 NTKSFLSDMEEKGVFP---DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 432
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD-M 154
IIN L + ++ + ++ ++ K+ D YN++ + + A E +FD M
Sbjct: 433 AIINGLCKTGKYLRAKGVLD--EMLKIGMSPDTATYNILLVECCRNDNMMDA-ERIFDEM 489
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
PS P + +F+ ++ LL + + G+ D IL+ G C NG +
Sbjct: 490 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 549
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
A V DE +Q C +V TY+T+++GLC++ + EA L M G+ D TF L
Sbjct: 550 SEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 609
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I+G K G + + + L E M + P+ +Y ++ G + EL MI R+
Sbjct: 610 INGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 669
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
P+ +SY LI+G CN V + + +MV++GF
Sbjct: 670 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGF 704
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 135/290 (46%), Gaps = 4/290 (1%)
Query: 93 LYTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET 150
+YTL +IN L + ++ + + + +E+ F D YN + G + +A E
Sbjct: 358 VYTLNIMINALCKNQKIENTKSFLS--DMEEKGVFPDVVTYNTLINAYCRQGLLEEAFEL 415
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
+ M P V T+N ++N L Y +G+ K+G+ D NILL C
Sbjct: 416 MDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCR 475
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
N N+ A + DE P Q P++ ++S L+ L + G +++A M++ G+ D V
Sbjct: 476 NDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 535
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ ILI G + G + E +K+ + M +GC + +Y +L GL +K EA EL M
Sbjct: 536 YTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMT 595
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P F ++ LI+G + + + M+Q+ P + + ++
Sbjct: 596 ERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLI 645
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 134/279 (48%), Gaps = 4/279 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y I+N L + K +++ + + F D + + + G ++KA+ TLF+
Sbjct: 571 YNTILNGLCKEKMLSEADELFTEMTERGV--FPDFYTFTTLINGYXKDGNMNKAV-TLFE 627
Query: 154 MP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M N P V T+N +++ ++ ++ + + IL+ G C G
Sbjct: 628 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG 687
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+ AF + DE ++ E + T +T++ G C GN +A L M +GI D +T+N
Sbjct: 688 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 747
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
LI+G K+ ++ L+ +M+ G P+ +Y +L G + R EA+ ++ +MI
Sbjct: 748 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 807
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++P +Y LI+G Q +++ V +M+Q+GFVP
Sbjct: 808 GVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 4/229 (1%)
Query: 158 NCWPSVKTFNLVLNLLVSA-KLYGEIQGIYTSAAK-LGVEIDACCLNILLKGLCENGNLE 215
NC + F+L++ V A KL + +K L V I+AC N LL GL + G ++
Sbjct: 283 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINAC--NSLLGGLVKVGWVD 340
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A+ + E + + NV T + +++ LC+ +E L ME +G+ D VT+N LI
Sbjct: 341 LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 400
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+ +QG +EE +L++ M GKG P +Y ++ GL ++ AK ++ M+ MS
Sbjct: 401 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 460
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
P +Y L+ C + D + + +M QG VP + + ++G ++
Sbjct: 461 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLS 509
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 122/274 (44%), Gaps = 35/274 (12%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +S+A++ +M C V T+N +LN L K+ E ++T + GV D
Sbjct: 547 GVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 606
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK--------------- 246
L+ G ++GN+ A + + ++N +P+V TY+TL+ G C+
Sbjct: 607 TTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS 666
Query: 247 --------------------GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
G V EAF L + M +G +A +T N ++ G + G +
Sbjct: 667 RRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK 726
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+ L M KG P+ +Y ++ G + ++ A LV +M + P ++Y +++
Sbjct: 727 ADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILN 786
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
G Q +++ + ++ KM+++G P + ++
Sbjct: 787 GFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 820
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A ++ + E + S S+ N +L LV IY + GV+++
Sbjct: 301 ARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYT 360
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
LNI++ LC+N +E L + ++ P+V TY+TL++ C +G +EEAF L++ M
Sbjct: 361 LNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 420
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G+ T+N +I+GL K GK +L+ M G P++A+Y +L
Sbjct: 421 GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMM 480
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A+ + M + + P VS+ LI L ++ + M G P ++ ++
Sbjct: 481 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 540
Query: 381 G 381
G
Sbjct: 541 G 541
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 101/220 (45%), Gaps = 4/220 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAG 142
+++ P+ Y +I+ + + + ++ + ++ + + Y + I Y NM G
Sbjct: 631 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI--YPNHISYGILINGYCNM-G 687
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+S+A +M ++ T N ++ A + ++ G+ D N
Sbjct: 688 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 747
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G + N++ AF ++++ P+V TY+ +++G +G ++EA ++ +M
Sbjct: 748 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 807
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
G++ D T+ LI+G Q ++E ++ + M +G P+
Sbjct: 808 GVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 154/349 (44%), Gaps = 39/349 (11%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
LR V+ Q K K P+ Y I+ L + R + ++ ++ L +
Sbjct: 263 LRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGL--VPN 320
Query: 128 GFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
YN +I Y N G + KA +M S S+ T+NL ++ L G+ +
Sbjct: 321 AVTYNALIDGYCN-KGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMI 379
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH----- 241
+ G+ DA NIL+ G C G+ + AF +LDE + +P + TY++L++
Sbjct: 380 KEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKR 439
Query: 242 ------------------------------GLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G C GN++ AF LL+ M++ + D +T+
Sbjct: 440 NRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITY 499
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N L+ G ++GKVEE +LL+ MK +G P+ SY ++ G + +A + M+
Sbjct: 500 NTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMT 559
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P+ ++Y LI GLC + E + +LK+MV +G P + I+
Sbjct: 560 TGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 125/255 (49%), Gaps = 2/255 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y L I+ L R +++++ ++ + + D +N++ G +A L +
Sbjct: 359 YNLFIHALFMEGRMGDADNMIKEMREKGM--MPDAVTHNILINGYCRCGDAKRAFGLLDE 416
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P++ T+ ++ +L E +++ + G+ D N L+ G C NGN
Sbjct: 417 MVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGN 476
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ AF +L E P+ TY+TLM G C +G VEEA LL+ M+ GI D +++N
Sbjct: 477 IDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNT 536
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LISG K+G +++ ++ + M G P +Y ++ GL + A+EL+ M+ +
Sbjct: 537 LISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKG 596
Query: 334 MSPSFVSYKKLIHGL 348
++P +Y +I +
Sbjct: 597 ITPDDSTYLSIIEAM 611
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 117/227 (51%)
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
++A+E + + P+++T N +L+L + +Y ++ + NI+
Sbjct: 163 NEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIM 222
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ LC+ G L+ A + +PNV TY+T++HG C +G + A + + M+ +G+
Sbjct: 223 INVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGL 282
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ D T+N ISGL K+G++EE L+ +M G PN+ +Y ++ G +K +A
Sbjct: 283 EPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYA 342
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
MI + + S V+Y IH L + + D D ++K+M ++G +P
Sbjct: 343 YRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMP 389
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 6/294 (2%)
Query: 81 YSKRKDYNPNEALYT--LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG 138
Y++ N +LYT ++IN L + + ++ + + E L + YN I I+G
Sbjct: 204 YAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHM--ETLGVKPNVVTYNTI-IHG 260
Query: 139 N-MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+ + G+ +A M P T+N ++ L E G+ + G+ +
Sbjct: 261 HCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPN 320
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A N L+ G C G+L+ A+ DE + ++ TY+ +H L +G + +A +++
Sbjct: 321 AVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIK 380
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M +G+ D VT NILI+G + G + LL+ M GKG P +Y ++Y L +
Sbjct: 381 EMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRN 440
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
R EA L ++ E + P + + LI G C ++ +LK+M +P
Sbjct: 441 RMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLP 494
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 114/238 (47%), Gaps = 2/238 (0%)
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M N S+ TFN+++N+L + + LGV+ + N ++ G C G
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+ A + + EP+ TY++ + GLC++G +EEA GL+ +M G+ + VT+N
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
LI G +G +++ + M KG + +Y ++ L + R +A ++ M +
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
M P V++ LI+G C + +L +MV +G P + + ++ GK NR
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLI--YVLGKRNR 441
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 18/243 (7%)
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA---CCL 201
S AI L+ +PS PS+ NL+ L++S + I+ A +DA
Sbjct: 97 SLAICVLYRLPSPK--PSI---NLIQRLILSPTCTN--RTIFDELALARDRVDAKTTLIF 149
Query: 202 NILLKGLCE----NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
++L++ CE N LE FY++ E + PN+ T + ++ + + A+ L
Sbjct: 150 DLLVRAYCELKKPNEALEC-FYLIKE---KGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M I + TFNI+I+ L K+GK+++ + + M+ G PN +Y +++G +
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+F A+ + M + + P +Y I GLC + +E+ ++ KM++ G VP +
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325
Query: 378 EIV 380
++
Sbjct: 326 ALI 328
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 7/297 (2%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+ N+ KR P + +IN L +++ D E + +E+ + D F Y+V+ I
Sbjct: 245 IFNEIRKR-GLRPTTVSFNTLINGLCKSRNLD--EGFRLKKTMEENRIYPDVFTYSVL-I 300
Query: 137 YG-NMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+G GR+ A E LFD M P+ TF +++ ++ Y +GV
Sbjct: 301 HGLCKEGRLDVA-EQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGV 359
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ D N LL GLC+ G++ A ++DE +P+ TY+TL+ G C++G++E A
Sbjct: 360 KPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAME 419
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ + M EG+ D V F LISG + G+V + + L M G P+ A+Y V+ G
Sbjct: 420 IRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYC 479
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K +L+ M P ++Y L++GLC Q +++ + +L+ M+ G P
Sbjct: 480 KKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTP 536
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%)
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
Y P V+ +N+++N + + I+ K G+ N L+ GLC++ NL+
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDE 276
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
F + + P+V TYS L+HGLC++G ++ A L + M+ G+ + +TF LI
Sbjct: 277 GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALID 336
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G + +++ M +M G P+ Y +L GL +A++LV M M P
Sbjct: 337 GQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKP 396
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
++Y LI G C + +E + K M ++G V
Sbjct: 397 DKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 15/282 (5%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL----- 151
II L K D+ + I R S+ F ++ + I +G +S AI+
Sbjct: 123 IIRFLVSRKGKDSAASVFAAILDTAGTRCSN-FVFDALMIAYWDSGFVSDAIQCFRLVRN 181
Query: 152 --FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
F +P + C +L+ ++++ I Y+ + G NIL+ C
Sbjct: 182 SNFQIPFHGC-------GYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFC 234
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G++ A + +E K+ P +++TL++GLC+ N++E F L + ME I D
Sbjct: 235 KEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVF 294
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+++LI GL K+G+++ +L + M+ +G PN ++ ++ G +R A +M
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQM 354
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + P V Y L++GLC V ++ +M G P
Sbjct: 355 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKP 396
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 130/292 (44%), Gaps = 5/292 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++I+ L + R D E + ++ L +G + + + R+ A+
Sbjct: 291 PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGL--RPNGITFTALIDGQYRSRRMDSAM 348
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
T M + P + +N +LN L + + + +G++ D L+ G
Sbjct: 349 NTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGY 408
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G+LE+A + ++ + ++ L+ G C G V +A L M G+ D
Sbjct: 409 CKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDD 468
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+ ++I G K+G V+ G KLL+ M+ G P +Y ++ GL + + A L+
Sbjct: 469 ATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEA 528
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ ++P ++Y L+ G C ED +LK ++G + + +V
Sbjct: 529 MLNLGVTPDDITYNILLEGHCKNGKAED---LLKLRNEKGLIVDYAYYTSLV 577
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 1/168 (0%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P V+ Y+ L++ C++G++ +A + + G+ TV+FN LI+GL K ++EG +L
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+ M+ YP+ +Y +++GL + R A++L M + P+ +++ LI G
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTE 397
+ ++ +M+ G P + M+ ++ G G N+ R V E
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDE 388
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 137/282 (48%), Gaps = 27/282 (9%)
Query: 125 FSDGFFYNVIKIYGNMA------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
S GF NVI +Y + G++ +A++ L++M + N P + T++++++ L
Sbjct: 318 LSSGFQLNVI-LYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCK--- 373
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNIL----------LKGLCENGNLEAAFYVLDEFPKQN 228
QG A +L E+ C N + LKGLCE G L A D N
Sbjct: 374 ----QGKVQQAIQLYKEM---CFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSN 426
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
P+V Y+ ++ G + G+VEEA L +R+ + I VTFN LI G K KV E
Sbjct: 427 LRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEAR 486
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+LLE +K G P++ +Y ++ ++ + EL+ M + + P+ V+Y +I GL
Sbjct: 487 RLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGL 546
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
C Q+ +E+ +L+ M +G P + I+ C KD R
Sbjct: 547 CKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMR 588
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 128/259 (49%), Gaps = 9/259 (3%)
Query: 127 DGFFYNVIKIYGNM-AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D + YN++ I+G + AG + +A+E DM P + T+ +V L G + G
Sbjct: 219 DTYSYNIL-IHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAK---GFHLLGLMSGA 274
Query: 186 YTSAAKL----GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
K+ G++ D +L+ G C+ GN+E A + + + NV YS L+
Sbjct: 275 REIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLS 334
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
LC++G V+EA LL ME+ + D VT++ILI GL KQGKV++ ++L + M +P
Sbjct: 335 SLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFP 394
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
NS ++ +L GL +K +A+ +I + P Y +I G VE+ +
Sbjct: 395 NSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLY 454
Query: 362 KKMVQQGFVPRMGMWREIV 380
K++ + P + + ++
Sbjct: 455 KRLRDKAITPSIVTFNSLI 473
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
N P V +N++++ V E +Y + N L+ G C+N + A
Sbjct: 426 NLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEA 485
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+L+ EP+ TY+TLM+ CE+GN+ + LL M + I+ VT+ ++I G
Sbjct: 486 RRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKG 545
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L KQ K+EE ++LLE M+ KG P+ +Y ++ K +A EL+ M+ + P+
Sbjct: 546 LCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPT 605
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVL 361
+Y LI GLC VED D VL
Sbjct: 606 PATYNVLIDGLCRYGDVEDADRVL 629
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 4/227 (1%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ L M N PS++T+N +LL + + + +Y G A +I
Sbjct: 99 VHDALFVLVKMKEQNLRPSIQTYN---SLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSI 155
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ GLC A L + + P+V +++T+M C+ G + A M G
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I DT ++NILI GL G +EE ++L M+ +G P+ +Y+ V G A+
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275
Query: 324 ELVGRMIC-ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
E++ +M+ E + P V+Y LI G C +E+ + + ++ GF
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGF 322
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A+ + PS+ TFN ++ + E + + S G+E A
Sbjct: 445 GDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTY 504
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ CE GN+ +L E ++ EP V TY+ ++ GLC++ +EE+ LLE M +
Sbjct: 505 TTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRA 564
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G+ D +T+N +I K + + +LL+ M P A+Y ++ GL +
Sbjct: 565 KGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVED 624
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A ++ + ++ + V+Y +I C + + V +MV++GF
Sbjct: 625 ADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGF 672
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 2/230 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVL-NLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G I+K E L +M + P+V T+ +V+ L KL +Q + AK G+ D
Sbjct: 515 GNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAK-GLAPDQIT 573
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N +++ C+ ++ AF +LD+ N EP TY+ L+ GLC G+VE+A +L ++
Sbjct: 574 YNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQ 633
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
I+ V + +I +G + +K+ +M KG + Y V+ L +
Sbjct: 634 DRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLIN 693
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
EAK M+ + +SP ++ +++ V V +L M++ G +
Sbjct: 694 EAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLL 743
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
Query: 136 IYGNMAGR-ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
IYG R + +A L + + PS T+ ++N ++ + +
Sbjct: 473 IYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDI 532
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E +++KGLC+ LE + +L++ + P+ TY+T++ C+ ++ +AF
Sbjct: 533 EPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFE 592
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL+ M ++ T+N+LI GL + G VE+ ++L ++ + +Y ++
Sbjct: 593 LLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHC 652
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K A ++ +M+ + S Y +I+ LC + L+ + + M+ G P
Sbjct: 653 VKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSP 709
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 138/283 (48%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + ++N L +A R + + + E L DG YN + AG + +A+
Sbjct: 223 PSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLT--PDGVSYNTLVSGYCKAGCLHEAL 280
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M P V TF +++ + A + + G+ ++ L+ G
Sbjct: 281 AVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGF 340
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C NG L+ A + E + +P+V Y+ L++G C+ G ++EA L+ ME++G+ D
Sbjct: 341 CRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDV 400
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ ++SG K G + +L +M KG P++ +Y ++ GL +++R +A EL +
Sbjct: 401 VTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEK 460
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + P +Y LI G C + V+ + +M+++G +P
Sbjct: 461 MLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLP 503
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 135/289 (46%), Gaps = 3/289 (1%)
Query: 84 RKDYNPNEALYTLIINKL-AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
R PN Y +++ L A+ +R +A+ + ++ + YN + AG
Sbjct: 147 RDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCA--PNVVTYNTLVAAFCRAG 204
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A + M PS+ TFN V+N L A + + ++ A+ G+ D N
Sbjct: 205 EVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYN 264
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G L A V E ++ P+V T+++L+H +C GN+E A L+ +M
Sbjct: 265 TLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRER 324
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + TF LI G + G +++ + ++ M+ P+ Y ++ G R EA
Sbjct: 325 GLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEA 384
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+EL+ M + M P V+Y ++ G C + + +KM+++G VP
Sbjct: 385 RELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVP 433
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 2/210 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ +N VL L A L + + S + GV + NIL++ LC G E A V
Sbjct: 118 PSLLAYNAVLLALSDASL-PSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176
Query: 221 L-DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ D+ C PNV TY+TL+ C G V+ A L+ M G+ VTFN +++GL
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K G++E+ K+ + M +G P+ SY ++ G EA + M + + P V
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
++ LIH +C +E ++ +M ++G
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGL 326
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 146/303 (48%), Gaps = 7/303 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L + ++V + + Q K P+ +T +I+ + +A + ++ +++ E+ R ++
Sbjct: 276 LHEALAVFAEMAQ----KGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMR-ERGLRMNE 330
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F +I + G + A+ + +M PSV +N+++N E + +
Sbjct: 331 FTFTALIDGFCR-NGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIH 389
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
G++ D + +L G C+ G+ ++AF + + K+ P+ TYS+L+ GLCE+
Sbjct: 390 EMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEER 449
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+ +A L E+M G+ D T+ LI G K+G V++ + L + M KG P+ +Y
Sbjct: 450 RLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYS 509
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ GL R EA+ L+ ++ E P + Y+ L+H C + V +LK +
Sbjct: 510 VLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMH-CCRTAEFKSVVALLKGFSMK 568
Query: 368 GFV 370
G +
Sbjct: 569 GLM 571
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 1/171 (0%)
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL-ERMESEGIDADTV 269
+ +L +A +L + PNV TY+ L+ LC +G EEA G++ + M G + V
Sbjct: 132 DASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVV 191
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+N L++ + G+V+ +L+ M+ G P+ ++ V+ GL R +A+++ M
Sbjct: 192 TYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEM 251
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E ++P VSY L+ G C + + V +M Q+G VP + + ++
Sbjct: 252 AREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLI 302
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 112/293 (38%), Gaps = 52/293 (17%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y ++IN + R D +++ ++ + + D Y+ I G A
Sbjct: 362 QPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGM--KPDVVTYSTILSGYCKIGDTDSA 419
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E M P T++ ++ L + G+ ++ +LG++ D L+ G
Sbjct: 420 FELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDG 479
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA--------------- 252
C+ GN++ A + DE K+ P+V TYS L+ GL + +EA
Sbjct: 480 HCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPD 539
Query: 253 -------------------FGLLERMESEGI--DADTV--------------TFNILISG 277
LL+ +G+ AD V +++LI G
Sbjct: 540 NIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHG 599
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ G + + + +++ G PNS S ++ GL ++ EA ++ ++
Sbjct: 600 HCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELL 652
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 108/256 (42%), Gaps = 18/256 (7%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ + +L + + D S LN+ +K P+ Y+ +I L + +R ++
Sbjct: 399 DVVTYSTILSGYCKIGDTDSAFE-LNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACEL 457
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ K+ +L D F Y + G + KA+ +M P V T++++++ L
Sbjct: 458 FE--KMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGL 515
Query: 174 VSAKLYGEIQGI-----YTSAAKLGVEIDA---CC-------LNILLKGLCENGNLEAAF 218
+ E Q + Y ++ +A CC + LLKG G + A
Sbjct: 516 SKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQAD 575
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
V ++ + + YS L+HG C GN+ +A +++ G ++ + L+ GL
Sbjct: 576 KVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGL 635
Query: 279 RKQGKVEEGMKLLERM 294
++G E +++ +
Sbjct: 636 FEEGMTVEADNVIQEL 651
>gi|224064366|ref|XP_002301440.1| predicted protein [Populus trichocarpa]
gi|222843166|gb|EEE80713.1| predicted protein [Populus trichocarpa]
Length = 503
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 156/325 (48%), Gaps = 9/325 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVL-NQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
L+PT++ +I + ++P++ + + + K Y+ N +Y +I+ L + R +++++
Sbjct: 9 LTPTQLSQILRSQKNPLTALQIFKDAKDKYPSYHHNGPVYATMISILGNSDRIAEMKEVI 68
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+++ + C D F IK Y + AG+IS+A+ ++P +NC ++FN +L +LV
Sbjct: 69 DQMR-DDSCECKDSVFVTAIKTYAS-AGQISEAVSLFKNIPKFNCVNWTESFNTLLQILV 126
Query: 175 -SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+KL + ++ V+ LN+LL LC+ + A + E Q C PN
Sbjct: 127 KESKLETAHRFFLENSCGWEVKSRIRALNLLLDVLCQRNRSDLALQIFQEMDYQGCYPNR 186
Query: 234 RTYSTLMHGLCEKGNVEEA----FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+Y LM GLCE G + EA + + R+ +G D V + L+ L G+VEE M+
Sbjct: 187 DSYRILMRGLCEDGRLNEATHLLYSMFWRISQKGSGEDIVVYRTLLDALCDNGQVEEAME 246
Query: 290 LLERMKGKGC-YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+L ++ KG P ++ L + + K L+ + PS SY + L
Sbjct: 247 ILGKILRKGLKAPKRYRHRLDLSQCNNCEDIEATKLLINEALIRGGVPSLASYTAMAVDL 306
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRM 373
+ D VL + ++G+ P +
Sbjct: 307 YCEGKTGQADKVLDETQERGYRPSL 331
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE-IQGIYTSAAKLGVEIDACC 200
G+ +A + L + PS++T+ + L GE I I + +
Sbjct: 310 GKTGQADKVLDETQERGYRPSLRTYEAKVTALCRQGRSGEAINVIEREMVERNSVPNVRL 369
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N+LLKGLC+ GN A L KQ C N TY L+ GLC G EA +LE M
Sbjct: 370 YNVLLKGLCDAGNSAIAVSYLKRMAKQVGCVANQETYGILVDGLCRDGRFVEASKVLEEM 429
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
+ T+NILI GL G+ E + LE M + P
Sbjct: 430 LIKSYWPPADTYNILIRGLSSMGRQYEAVIWLEEMVSQDKLP 471
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 124/319 (38%), Gaps = 79/319 (24%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE----IQGIYTSAAKLGVEIDA 198
R A++ +M C+P+ ++ +++ L E + ++ ++ G D
Sbjct: 166 RSDLALQIFQEMDYQGCYPNRDSYRILMRGLCEDGRLNEATHLLYSMFWRISQKGSGEDI 225
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEF-------PKQ-----------NCE---------- 230
LL LC+NG +E A +L + PK+ NCE
Sbjct: 226 VVYRTLLDALCDNGQVEEAMEILGKILRKGLKAPKRYRHRLDLSQCNNCEDIEATKLLIN 285
Query: 231 --------PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
P++ +Y+ + L +G +A +L+ + G T+ ++ L +QG
Sbjct: 286 EALIRGGVPSLASYTAMAVDLYCEGKTGQADKVLDETQERGYRPSLRTYEAKVTALCRQG 345
Query: 283 KVEEGMKLLER-----------------MKG--------------------KGCYPNSAS 305
+ E + ++ER +KG GC N +
Sbjct: 346 RSGEAINVIEREMVERNSVPNVRLYNVLLKGLCDAGNSAIAVSYLKRMAKQVGCVANQET 405
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKM 364
Y ++ GL RF EA +++ M+ + P +Y LI GL + + E V W L++M
Sbjct: 406 YGILVDGLCRDGRFVEASKVLEEMLIKSYWPPADTYNILIRGLSSMGRQYEAVIW-LEEM 464
Query: 365 VQQGFVPRMGMWREIVGCV 383
V Q +P + +WR +V V
Sbjct: 465 VSQDKLPELYVWRSLVTSV 483
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 148/292 (50%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +++ +A+ K+FD + + + K+++L + + YN++ +IS A+
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGE--KMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M PS+ T + +LN K + + ++G D L+ GL
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ A ++D ++ C+PN+ TY +++GLC++G+++ AF LL +ME+ I+AD
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V FN +I L K V++ + L + M+ KG PN +Y ++ L R+ +A +L+
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI ++++P+ V++ LI + + + + M+++ P + + ++
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 126/274 (45%), Gaps = 35/274 (12%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR S A + L DM P++ TFN +++ V + E + ++ K ++ D
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C + L+ A + + ++C P++ TY+TL+ G C+ VE+ L M
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ DTVT+ LI GL G + K+ ++M G P+ +Y +L GL + + +
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 322 AKELVGRM------------------ICER-----------------MSPSFVSYKKLIH 346
A E+ M +C+ + P+ V+Y +I
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
GLC+++L+++ +LKKM + G +P G + ++
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 113/228 (49%), Gaps = 1/228 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ FN +L+ + K + + + +LG+ + NIL+ C + A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K EP++ T S+L++G C + +A L+++M G DT+TF LI GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
K E + L++RM +GC PN +Y V+ GL + A L+ +M ++ V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV-TFGK 387
+ +I LC + V+D + K+M +G P + + ++ C+ ++G+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSD 127
R IS+ L + Y P+ + ++N KR DA+ + Q +++
Sbjct: 58 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM-------- 109
Query: 128 GFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
G+ + I + G + S+A+ + M C P++ T+ +V+N L G+I
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR---GDI 166
Query: 183 QGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ K+ +E D N ++ LC+ +++ A + E + PNV TYS+L
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ LC G +A LL M + I+ + VTFN LI K+GK E KL + M +
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P+ +Y ++ G R +AK++ M+ + P +Y LI G C K VED
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 360 VLKKMVQQGFV 370
+ ++M +G V
Sbjct: 347 LFREMSHRGLV 357
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 8/266 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRF---DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K NPN + +I+ + +F + + D M + ++ D F YN + M
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID-----PDIFTYNSLINGFCMH 303
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ KA + M S +C+P + T+N ++ +K + ++ + G+ D
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L++GL +G+ + A V + P++ TYS L+ GLC G +E+A + + M+
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
I D + +I G+ K GKV++G L + KG PN +Y ++ GL K+ E
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 322 AKELVGRMICERMSPSFVSYKKLIHG 347
A L+ +M + P +Y LI
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 116/238 (48%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RIS A+ + M P TF +++ L E + + G + +
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+++ GLC+ G+++ AF +L++ E +V ++T++ LC+ +V++A L + ME++
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI + VT++ LIS L G+ + +LL M K PN ++ ++ + + +F EA
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++L MI + P +Y LI+G C ++ + + MV + P + + ++
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 136/282 (48%), Gaps = 6/282 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++N L + D +++ +++ K+ +D +N I + A+
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI--EADVVIFNTIIDSLCKYRHVDDAL 205
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M + P+V T++ +++ L S + + + + + + + N L+
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G A + D+ K++ +P++ TY++L++G C +++A + E M S+ D
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N LI G K +VE+G +L M +G ++ +Y ++ GL A+++ +
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 329 MICERMSPSFVSYKKLIHGLCN----QKLVEDVDWVLKKMVQ 366
M+ + + P ++Y L+ GLCN +K +E D++ K ++
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ +T +I+ L + ++ R+ V++ C+ + Y V+ G I
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQ-PNLVTYGVVVNGLCKRGDIDL 168
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M + V FN +++ L + + ++ G+ + + L+
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC G A +L + ++ PN+ T++ L+ ++G EA L + M ID
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T+N LI+G ++++ ++ E M K C+P+ +Y ++ G KR + EL
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + V+Y LI GL + ++ V K+MV G P
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 63/145 (43%), Gaps = 1/145 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA+E M + + ++ + A + ++ S + GV+ +
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ GLC L+ A+ +L + + P+ TY+TL+ G+ + L+ M S
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Query: 262 EGIDADTVTFNILISGLRKQGKVEE 286
D T L++ + G++++
Sbjct: 529 CRFVGDASTIG-LVANMLHDGRLDK 552
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ F +L + K Y + + T GV + LNIL+ C + AF V
Sbjct: 43 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K +P+ T++TL+ GLC +G + EA L ++M EG + VT+ LI+GL K
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++LL M+ C P+ Y ++ L ++ EA L +M+ + +SP +
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y L+H LCN + V +L +MV +P + ++ +V
Sbjct: 223 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 262
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ P+V T N+++N G + KLG + D L++GLC G
Sbjct: 71 MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 130
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A ++ D+ + +PNV TY TL++GLC+ GN A LL ME D V +
Sbjct: 131 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 190
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I L K +V E L +M G+G P+ +Y +++ L + + L+ +M+ +
Sbjct: 191 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 250
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P V + ++ LC + V + ++ M+Q+G P
Sbjct: 251 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 288
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 2/239 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ A L + P TF L+ L V K+ GE ++ G + +
Sbjct: 95 RVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKI-GEALHLFDKMIDEGFQPNVVTY 153
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC+ GN AA +L + NC+P+V Y++++ LC+ V EAF L +M
Sbjct: 154 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVG 213
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI D T+ L+ L + + LL +M P+ + V+ L + + E
Sbjct: 214 QGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTE 273
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+V MI + P V+Y L+ G C Q +++ V MV++GF P + + ++
Sbjct: 274 AHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 332
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 141/338 (41%), Gaps = 50/338 (14%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------ 140
+ P+ +T +I L + + ++ +GF NV+ YG +
Sbjct: 111 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKM-------IDEGFQPNVVT-YGTLINGLCK 162
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G S AI L M NC P V + +++ L + E +++ G+ D
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ LC + +L++ P+V +ST++ LC++G V EA +++ M
Sbjct: 223 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 282
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY-------------- 306
G++ D VT+ L+ G Q +++E +K+ + M KG P+ SY
Sbjct: 283 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGL 342
Query: 307 ---QEVLYGLL-----------------DK-KRFPEAKELVGRMICERMSPSFVSYKKLI 345
QEV+ GL+ DK K F + + L+ M+ ++ P+ V + ++
Sbjct: 343 VSLQEVI-GLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVV 401
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
LC + V + V+ M+++G P + + CV
Sbjct: 402 DALCKEGKVMEAHDVVDMMIKRGVEPNAVKVFDTMKCV 439
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G+I +A+E F M C+P V T+
Sbjct: 273 VGKIDEALELFFQMKEDGCFPDVPTYT--------------------------------- 299
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+L+ CE G A +E + EPNV TY+ L+ C+ G ++E +L M
Sbjct: 300 --VLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTML 357
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G+ + V FN LI G K+G +E+ + +L+ MK PNS +Y E++ G KK
Sbjct: 358 EKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMD 417
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK-MVQQGFVPRMGMWREI 379
A L+ +M ++SP+ V+Y LIHGLC ++V D W L M++ GFVP +
Sbjct: 418 RAMALLNKMYENKLSPNLVTYNTLIHGLCKARVV-DSAWRLHHLMIKDGFVPDQRTFCAF 476
Query: 380 VGCV 383
+ C+
Sbjct: 477 IDCL 480
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 12/234 (5%)
Query: 153 DMPSYNCWPSVKTFNLVLNL------LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
DM + P++ +FN ++N +V AK Y + K G D+ L+
Sbjct: 180 DMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAY------FCGLMKFGFCCDSFTYTSLIL 233
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+ L A+ V + P++ C N +Y+ L+HG CE G ++EA L +M+ +G
Sbjct: 234 GYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFP 293
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T+ +L++ + GK E +K E M G PN +Y ++ + E E++
Sbjct: 294 DVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEML 353
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + + S V + LI G C + ++ED VL M P + E++
Sbjct: 354 STMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELI 407
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 133/279 (47%), Gaps = 6/279 (2%)
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
DAI ++ +K+ K+C S YN + + +A+ L M P++ T+N
Sbjct: 383 DAI-CVLDSMKLNKVCPNSRT--YNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYN 439
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+++ L A++ ++ K G D + LC+ G +E A V + ++
Sbjct: 440 TLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEK 499
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
+ E N Y+ L+ G C+ +A L +RM EG +++TFN+L+ GLRK+GKVE+
Sbjct: 500 HAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDA 559
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
M L++ M P +Y ++ +L + F A + +MI P+ V+Y I
Sbjct: 560 MSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKA 619
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV---GCV 383
C Q + + + ++ K+ ++G + ++ +V GC+
Sbjct: 620 YCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCI 658
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 125/282 (44%), Gaps = 2/282 (0%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
NE YT +I+ + + D ++ ++K E C F D Y V+ G+ ++A++
Sbjct: 259 NEVSYTNLIHGFCEVGKIDEALELFFQMK-EDGC-FPDVPTYTVLVAAFCEVGKETEALK 316
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+M P+V T+ ++++ E + ++ + G+ N L+ G C
Sbjct: 317 FFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYC 376
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G +E A VLD PN RTY+ L+ G C K +++ A LL +M + + V
Sbjct: 377 KRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLV 436
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+N LI GL K V+ +L M G P+ ++ + L + +A ++ +
Sbjct: 437 TYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESL 496
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + Y LI G C + D + K+M+ +G P
Sbjct: 497 KEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFP 538
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 130/281 (46%), Gaps = 13/281 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRISKA 147
PN YT I + R E+++ +IK E + D F Y+V + YG + G++ A
Sbjct: 608 PNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGI--LLDSFIYDVLVNAYGCI-GQLDSA 664
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L M C PS +T++++L L+ K E G+ ++ + V+
Sbjct: 665 FGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDN---------AN 715
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ + + E + ++ +Q C PNV TYS L+ GLC+ ++ AF L M+ GI
Sbjct: 716 IWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPS 775
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
N L+S K G EE ++LL+ M + SY+ ++ GL ++ +A+E+
Sbjct: 776 ENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFR 835
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ + V +K L+ GL + V++ + M + G
Sbjct: 836 SLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTG 876
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 128/292 (43%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN YT++I+ + + D +++ + +EK S F +I Y G + AI
Sbjct: 328 PNVYTYTVLIDYFCKVGKMDEGMEMLSTM-LEKGLVSSVVPFNALIDGYCK-RGMMEDAI 385
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M P+ +T+N ++ K + + + + N L+ GL
Sbjct: 386 CVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGL 445
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ +++A+ + K P+ RT+ + LC+ G VE+A + E ++ + +A+
Sbjct: 446 CKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANE 505
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ LI G K K + L +RM +GC+PNS ++ +L GL + + +A LV
Sbjct: 506 FLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDV 565
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M P+ +Y LI + + + + L +M+ G P + + +
Sbjct: 566 MGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFI 617
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 144/360 (40%), Gaps = 74/360 (20%)
Query: 47 AYKLNH---KDWLSPTEVLKIFSNLRDPISVISVLNQYS------KRKDYNPNEALYTLI 97
A++L+H KD P + + F D + + + Q K K NE LYT +
Sbjct: 454 AWRLHHLMIKDGFVPDQ--RTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTAL 511
Query: 98 INKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY 157
I+ +A++F + +R+ E F + +NV+ G++ A+ + M +
Sbjct: 512 IDGYCKAEKFSDAHLLFKRMLFEGC--FPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKF 569
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
+ P+V T+ IL++ + + + A
Sbjct: 570 DAKPTVHTYT-----------------------------------ILIEEILRESDFDRA 594
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
LD+ C+PNV TY+ + C +G + EA ++ +++ EGI D+ +++L++
Sbjct: 595 NMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNA 654
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL------------ 325
G+++ +L RM GC P+ +Y +L L+ +K E L
Sbjct: 655 YGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNA 714
Query: 326 ---------VGRMICERM-----SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ M+ E+M P+ +Y KLI GLC + + + M + G P
Sbjct: 715 NIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISP 774
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
I LF+ M C P+V T++ ++ L + ++ + G+ N LL
Sbjct: 725 ITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLS 784
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
C+ G E A +LD + N ++ +Y L+ GL E+GN E+A + + S G +
Sbjct: 785 SCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNY 844
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
D V + +L+ GL ++G V+E +L + M+ GC +S ++
Sbjct: 845 DEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTH 884
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A +VL+ +V +Y+ L L G ++E L + M ++G++ + ++FN +++
Sbjct: 139 ARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVN 198
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
K G V + G +S +Y ++ G +A ++ M E
Sbjct: 199 AHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLR 258
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT-FGKDNRNRVYV 395
+ VSY LIHG C +++ + +M + G P + + +V GK+ +
Sbjct: 259 NEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFF 318
Query: 396 TETVDS 401
E V++
Sbjct: 319 EEMVEN 324
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 136/300 (45%), Gaps = 3/300 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + + +T ++ L KR DI+ R ++ +L + F YN++ R
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR-RMTQLGCIPNVFSYNILLKGLCDENR 177
Query: 144 ISKAIETLFDMP--SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+A+E L MP +C P V ++ V+N + G Y G+ +
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ LC+ ++ A VL K PN RTY++++HG C G +EA G L++M S
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G++ D VT+N L+ L K G+ E K+ + M +G P +Y +L G K E
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
L+ M+ + P+ + LI Q V+ V KM QQG P + ++G
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 120/269 (44%), Gaps = 12/269 (4%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG--- 142
D P+ YT +IN + D + G NV+ +A
Sbjct: 194 DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM-------LDRGILPNVVTYSSIIAALCK 246
Query: 143 --RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ KA+E L M P+ +T+N +++ S+ E G GVE D
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ LC+NG A + D K+ +P + TY TL+ G KG + E GLL+ M
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI + F+ILI KQGKV++ M + +M+ +G P++ +Y V+ L R
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLC 349
+A +MI ER+SP + Y LIH LC
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 23/329 (6%)
Query: 70 DPISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFD-AIEDI 113
D +S +V+N + K D + PN Y+ II L +A+ D A+E +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 114 MQRIK--VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+K V CR YN I +G+ +AI L M S P V T+N +++
Sbjct: 258 TSMVKNGVMPNCRT-----YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L E + ++ S K G++ + LL+G G L +LD + P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N +S L+ ++G V++A + +M +G++ DTVT+ +I L K G+VE+ M+
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E+M + P + Y +++ L ++ +AKEL+ M+ + + + +I C +
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V + + + MV+ G P + + ++
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLI 521
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 2/274 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +PN +++++I A+ + D + +++ + L D Y + +GR
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL--NPDTVTYGTVIGILCKSGR 424
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ M P +N +++ L + + + + G+ +D N
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C+ G + + + D + +P++ TYSTL+ G C G ++EA LL M S G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D VT+N LI+G K ++E+ + L M+ G P+ +Y +L GL +R AK
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
EL + +Y ++HGLC L ++
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 127/294 (43%), Gaps = 4/294 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P +Y +I+ L ++D ++++ + +C D F+N I GR+ ++
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL--DTIFFNSIIDSHCKEGRVIES 498
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E LFD M P + T++ +++ A E + S +G++ D N L+
Sbjct: 499 -EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+ +E A + E P++ TY+ ++ GL + A L + G
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T+NI++ GL K +E +++ + + + ++ ++ LL R EAK+L
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P +Y + L Q L+E++D + M + G M IV
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PN+ TY L+ C G ++ F L + +G D + F L+ GL + + M +
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 291 -LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE--RMSPSFVSYKKLIHG 347
L RM GC PN SY +L GL D+ R EA EL+ M + P VSY +I+G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ ++ +M+ +G +P + + I+ +
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAAL 244
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 102/242 (42%), Gaps = 8/242 (3%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDI---MQRIKVEKLCRFSDGFFYNVIKIYGNM 140
R P+ Y+ +I+ A + D + M + ++ C + KI
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKI---- 562
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
R+ A+ +M S P + T+N++L L + + +Y + G +++
Sbjct: 563 -SRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI+L GLC+N + A + + + RT++ ++ L + G +EA L +
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T++++ L +QG +EE L M+ GC NS ++ LL +
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 741
Query: 321 EA 322
A
Sbjct: 742 RA 743
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 154/335 (45%), Gaps = 18/335 (5%)
Query: 53 KDWLSPTEVL--KIFSNL---RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
+D L PT++ I + D +S +++L + + PN +Y+ II+ L + R
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
+++ ++ + + F D F YN + + +GR S A + L +M P V T+N
Sbjct: 272 SDAQNLFTEMQEKGI--FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
++N V + E + +Y G+ + + ++ G C+ L+AA ++ +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
C PN+ T++TL+ G C +++ LL M G+ ADT T+N LI G G +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER-----------MSP 336
+ LL+ M G P+ + +L GL D + +A E+ M + + P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y LI GL N+ + + + ++M +G VP
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 144/310 (46%), Gaps = 24/310 (7%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+L + +RK +P+ Y +IN + +F E++ E L R G N I
Sbjct: 312 LLQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYD----EMLPR---GIIPNTITY 363
Query: 137 YGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ G R+ A + M + C P++ TFN +++ AK + + +
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ D N L+ G G+L AA +L E P++ T TL+ GLC+ G +++
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Query: 252 AFGLLERMESE-----------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
A + + M+ G++ D T+NILISGL +GK E +L E M +G
Sbjct: 484 ALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 543
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P++ +Y ++ GL + R EA ++ M + SP+ V++ LI+G C V+D +
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Query: 361 LKKMVQQGFV 370
+M ++G V
Sbjct: 604 FCEMGRRGIV 613
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 6/248 (2%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ AI+ DM PSV F ++ ++V + + +Y + + D NI
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+K C L A + K P+V T++TL+HGLC + V EA +M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VTF L++GL ++G++ E + LL+RM G P +Y ++ G+ K A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 324 ELVGRMICERMS---PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE-I 379
L+ +M E +S P+ V Y +I LC D + +M ++G P + + I
Sbjct: 240 NLLRKM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 380 VGCVTFGK 387
VG + G+
Sbjct: 298 VGFCSSGR 305
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 114/239 (47%), Gaps = 1/239 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+S+A++ M C P+V TF ++N L E + + G++
Sbjct: 164 RVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223
Query: 203 ILLKGLCENGNLEAAFYVLDEFPK-QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++ G+C+ G+ +A +L + + + PNV YS ++ LC+ G +A L M+
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI D T+N +I G G+ + +LL+ M + P+ +Y ++ + + +F E
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A+EL M+ + P+ ++Y +I G C Q ++ + + M +G P + + ++
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 142/292 (48%), Gaps = 15/292 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K +PN + +I+ AKR D +++ + L +D YN + I+G + G
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL--VADTTTYNTL-IHGFYLVGD 445
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-SAKLYGEIQ----------GIYTSAAKL 192
++ A++ L +M S P + T + +L+ L + KL ++ + S
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GVE D NIL+ GL G A + +E P + P+ TYS+++ GLC++ ++EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ + M S+ + VTF LI+G K G+V++G++L M +G N+ +Y ++ G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A ++ MI + P ++ + ++ GL +++ ++ +L+K+
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G E LE A + + + P+V + LM + + L ++ME +
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +FNILI K+ + ++ G +P+ ++ +L+GL + R EA
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ +M P+ V++ L++GLC + + + +L +M++ G P + IV
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
>gi|317106734|dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]
Length = 399
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 159/329 (48%), Gaps = 11/329 (3%)
Query: 25 ITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKR 84
+TR+ + A+ +++ + Y LN++ P ++K+ + RDP + ++ ++
Sbjct: 6 LTRRFCHSAAAIASTDSPAVVSNYSLNNRPLEEPA-LIKLKAE-RDPEKLFNLFKANAQN 63
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ N + +++LA A+RF IE++++ K R +GF +I +Y AG +
Sbjct: 64 RLVIENRFAFEDTVSRLAGARRFHYIENLLEHQKTLPQGR-REGFIVRIIMLYAK-AGMV 121
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA-KLGVEIDACCLNI 203
A+ T +DM Y C +VK+FN L +L + IQ A K + +D +NI
Sbjct: 122 KHALNTFYDMHLYGCKRTVKSFNAALKVLTGTRNMVAIQDFLCEAPEKFDITMDIFSINI 181
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++K LCE G L+ A+ V+ +F K E +V TY+TL+ GL M +G
Sbjct: 182 IIKALCEMGYLDKAYLVMVQFQKSGIEADVITYTTLISASYRNKLWMIGNGLWNLMVLKG 241
Query: 264 IDADTVTFNILISGL---RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ TFN+ I L R+ + + M+L++R+ G P+ +Y V+ G
Sbjct: 242 CKPNLATFNVRIQYLVNSRQSWEANDVMRLMQRI---GIAPDQVTYNLVIKGFCLAGYLE 298
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLC 349
AK + + E P+F Y+ +IH LC
Sbjct: 299 MAKRVYSALQGEVYKPNFKIYQTMIHYLC 327
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 6/230 (2%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
S LK+ + R+ +++ L + ++ D + +II L + D +M
Sbjct: 142 SFNAALKVLTGTRNMVAIQDFLCEAPEKFDITMDIFSINIIIKALCEMGYLDKAYLVM-- 199
Query: 117 IKVEKLCRFSDGFFYNVI--KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
++ +K +D Y + Y N I + L M C P++ TFN+ + LV
Sbjct: 200 VQFQKSGIEADVITYTTLISASYRNKLWMIGNGLWNL--MVLKGCKPNLATFNVRIQYLV 257
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
+++ E + ++G+ D N+++KG C G LE A V + +PN +
Sbjct: 258 NSRQSWEANDVMRLMQRIGIAPDQVTYNLVIKGFCLAGYLEMAKRVYSALQGEVYKPNFK 317
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
Y T++H LC+ G + A+ + + +G T + L++GL K G +
Sbjct: 318 IYQTMIHYLCKGGEFDLAYTMCKDCMGKGWYLHVDTIHALLNGLMKNGHL 367
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 93/238 (39%), Gaps = 3/238 (1%)
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCW 160
L + AI+D + EK D F N+I G + KA +
Sbjct: 150 LTGTRNMVAIQDFLCEAP-EKFDITMDIFSINIIIKALCEMGYLDKAYLVMVQFQKSGIE 208
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
V T+ +++ KL+ G++ G + + N+ ++ L + A V
Sbjct: 209 ADVITYTTLISASYRNKLWMIGNGLWNLMVLKGCKPNLATFNVRIQYLVNSRQSWEANDV 268
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ + P+ TY+ ++ G C G +E A + ++ E + + +I L K
Sbjct: 269 MRLMQRIGIAPDQVTYNLVIKGFCLAGYLEMAKRVYSALQGEVYKPNFKIYQTMIHYLCK 328
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
G+ + + + GKG Y + + +L GL+ +AK +V + +R P F
Sbjct: 329 GGEFDLAYTMCKDCMGKGWYLHVDTIHALLNGLMKNGHLGKAKLIV--TLAKRKVPPF 384
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 139/289 (48%), Gaps = 2/289 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+K PN Y II L + + E+ + + + D Y + G
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGI--LPDTIVYTTLVDGFCKRG 788
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
I A + ++M S + P V T+ +++ E ++ G+E D
Sbjct: 789 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFT 848
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G+++ AF V + + C PNV TY+TL+ GLC++G+++ A LL M
Sbjct: 849 ELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 908
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + T+N +++GL K G +EE +KL+ + G ++ +Y ++ +A
Sbjct: 909 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 968
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+E++ M+ + + P+ V++ L++G C ++ED + +L M+ +G P
Sbjct: 969 QEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1017
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 16/292 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV--EKLCRFSDGFFYNVIKIYGNM-- 140
+D P+ YT II+ Q I D+++ K+ E LCR G ++I M
Sbjct: 803 RDITPDVLTYTAIISGFCQ------IGDMVEAGKLFHEMLCR---GLEPDIITFTELMNG 853
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
AG I A M C P+V T+ +++ L + K+G++ +
Sbjct: 854 YCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 913
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N ++ GLC++GN+E A ++ EF + TY+TLM C+ G +++A +L
Sbjct: 914 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILT 973
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M +G+ VTFN+L++G G +E+G KLL M KG PN+ ++ ++ +
Sbjct: 974 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRN 1033
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A + M + P +Y+ L+ G CN + +++ ++ ++M +GF
Sbjct: 1034 NLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGF 1085
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 136/292 (46%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +YT +++ + A + + D Y I G + +A
Sbjct: 772 PDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDIT--PDVLTYTAIISGFCQIGDMVEAG 829
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +M P + TF ++N A + ++ + G + L+ GL
Sbjct: 830 KLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 889
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G+L++A +L E K +PN+ TY+++++GLC+ GN+EEA L+ E+ G++ADT
Sbjct: 890 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 949
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ L+ K G++++ ++L M GKG P ++ ++ G + ++L+
Sbjct: 950 VTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1009
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + ++P+ ++ L+ C + ++ + K M +G P + +V
Sbjct: 1010 MLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLV 1061
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 4/268 (1%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKAI 148
N A Y ++I+ + Q R + ++ ++++ D Y+ VI Y G + K
Sbjct: 668 NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYT--PDVISYSTVINGYCRF-GELDKVW 724
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + M P+ T+ ++ LL E + ++ G+ D L+ G
Sbjct: 725 KLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGF 784
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G++ AA E ++ P+V TY+ ++ G C+ G++ EA L M G++ D
Sbjct: 785 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDI 844
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+TF L++G K G +++ ++ M GC PN +Y ++ GL + A EL+
Sbjct: 845 ITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 904
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVED 356
M + P+ +Y +++GLC +E+
Sbjct: 905 MWKIGLQPNIFTYNSIVNGLCKSGNIEE 932
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 122/243 (50%), Gaps = 8/243 (3%)
Query: 144 ISKAIETLFDMP--SYNCWPS-VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV--EIDA 198
++++ FD+ +Y W S + F++ +LV + E + ++ G+ +D+
Sbjct: 576 VTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDS 635
Query: 199 CCLNILLKGLCENGNLEA-AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
C N+ L L ++ N A A V EFP+ NV +Y+ ++H +C+ G + EA LL
Sbjct: 636 C--NVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLL 693
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
ME +G D ++++ +I+G + G++++ KL+E+MK KG PNS +Y ++ L
Sbjct: 694 LMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRIC 753
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+ EA+E MI + + P + Y L+ G C + + +M + P + +
Sbjct: 754 KLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 813
Query: 378 EIV 380
I+
Sbjct: 814 AII 816
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 6/253 (2%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN++ + GRI++A L M P V +++ V+N +GE+ ++
Sbjct: 672 YNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR---FGELDKVWKLIE 728
Query: 191 KL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
K+ G++ ++ ++ LC L A E Q P+ Y+TL+ G C++G
Sbjct: 729 KMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRG 788
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ A M S I D +T+ +ISG + G + E KL M +G P+ ++
Sbjct: 789 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFT 848
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
E++ G +A + MI SP+ V+Y LI GLC + ++ + +L +M +
Sbjct: 849 ELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 908
Query: 368 GFVPRMGMWREIV 380
G P + + IV
Sbjct: 909 GLQPNIFTYNSIV 921
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 106/239 (44%), Gaps = 2/239 (0%)
Query: 143 RISKAIETLFDMPSYN-CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ + AI + P CW +V ++N+V++ + E + G D
Sbjct: 649 KTATAIIVFREFPEVGVCW-NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISY 707
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ G C G L+ + ++++ ++ +PN TY +++ LC + EA M
Sbjct: 708 STVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIG 767
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI DT+ + L+ G K+G + K M + P+ +Y ++ G E
Sbjct: 768 QGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 827
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +L M+C + P +++ +L++G C ++D V M+Q G P + + ++
Sbjct: 828 AGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLI 886
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 115/242 (47%), Gaps = 2/242 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN YT +I+ L + D+ +++ ++ K+ + F YN I +G I +A
Sbjct: 876 SPNVVTYTTLIDGLCKEGDLDSANELLH--EMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 933
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ + + + T+ +++ + + Q I T G++ N+L+ G
Sbjct: 934 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNG 993
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C +G LE +L+ + PN T++ L+ C + N++ A + + M S G++ D
Sbjct: 994 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPD 1053
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+ L+ G ++E L + MKGKG + ++Y ++ G +K+F EA+E+
Sbjct: 1054 GKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFD 1113
Query: 328 RM 329
+M
Sbjct: 1114 QM 1115
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A E L +M P++ T+N ++N L + E + G+ D
Sbjct: 893 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 952
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ C++G ++ A +L E + +P + T++ LM+G C G +E+ LL M +
Sbjct: 953 TTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 1012
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI + TFN L+ + ++ + + M +G P+ +Y+ ++ G + + E
Sbjct: 1013 KGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKE 1072
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A L M + S S +Y LI G +K + + +M + G
Sbjct: 1073 AWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGL 1120
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 3/196 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
N + YT +++ ++ D ++I+ + + L F NV+ + G +
Sbjct: 946 NADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTF--NVLMNGFCLHGMLEDG 1003
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M + P+ TFN ++ IY GVE D L+KG
Sbjct: 1004 EKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKG 1063
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C N++ A+++ E + +V TYS L+ G ++ EA + ++M +G+ AD
Sbjct: 1064 HCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAAD 1123
Query: 268 TVTFNILISGLRKQGK 283
F+ S + +GK
Sbjct: 1124 KEIFD-FFSDTKYKGK 1138
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 1/165 (0%)
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
F+ L + ++ + R + L E G + EA + E+M + G+ + N+ ++
Sbjct: 583 FFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLAR 642
Query: 278 LRKQ-GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
L K K + + G N ASY V++ + R EA L+ M + +P
Sbjct: 643 LSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTP 702
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+SY +I+G C ++ V +++KM Q+G P + I+G
Sbjct: 703 DVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIG 747
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 160/337 (47%), Gaps = 20/337 (5%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+S T ++ + P N ++ R + + Y ++++ L + + + +
Sbjct: 25 ISKTTFFQVLRFIASPPKAFEFFN-WASRNGFAHDSRSYFMMLDILGRNGNLNIARNFLF 83
Query: 116 RI--KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
I + + D F +++ YGN AG ++AI+ M S PSV TFN +L +L
Sbjct: 84 SIERRSNGSVKIEDRFCNTLLRSYGN-AGLFNEAIKLFSLMKSSGVSPSVITFNSLLLIL 142
Query: 174 V-------SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
+ + ++ E+ G Y GV D NIL++G C+N ++ F E +
Sbjct: 143 LKRGRTNMAHSVFDEMCGTY------GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSR 196
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM--ESEGIDADTVTFNILISGLRKQGKV 284
NCEP+V TY+TL+ GLC G V A +++ M + + + D VT+ L+ G + ++
Sbjct: 197 FNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEI 256
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER-MSPSFVSYKK 343
+E + + E M +G PN +Y ++ GL + ++F + KE++G + R P +Y
Sbjct: 257 DEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNT 316
Query: 344 LIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L++ C+ ++ + KKM + P + ++
Sbjct: 317 LMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLI 353
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 138/306 (45%), Gaps = 11/306 (3%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAG 142
R + P+ Y +++ L +A + ++++ + V+K+ S D Y + M
Sbjct: 196 RFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGM-VKKMKDLSPDVVTYTTLVRGYCMKQ 254
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA-AKLGVEIDACCL 201
I +A+ +M S P+ T+N ++ L + + +I+ I A G D C
Sbjct: 255 EIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTY 314
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ C+ GN + A + + + +P+ TYS L+ LC++G+ E A L +++
Sbjct: 315 NTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSD 374
Query: 262 EGI----DADT---VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
E I D T +N + L K GK + ++ ++ KG + SY+ ++ G
Sbjct: 375 EDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGT-QDPPSYKTLIIGHC 433
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ F +L+ M+ P F +Y LI+G + L++M++ ++P+
Sbjct: 434 KEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTS 493
Query: 375 MWREIV 380
++ I+
Sbjct: 494 VFHSIL 499
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 114/275 (41%), Gaps = 48/275 (17%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN+ Y +I L + ++FD I++I+ G + GR
Sbjct: 273 PNDITYNTLIKGLCEVQKFDKIKEILG----------------------GAVGGR----- 305
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
P T+N ++N A + E ++ +L V+ D+ ++L++ L
Sbjct: 306 ---------GFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNL 356
Query: 209 CENGNLEAAFYVLDEFPKQN-------CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
C+ G+ E A + D+ ++ C P V Y+ + LC+ G +A + ++
Sbjct: 357 CQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMK 416
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G D ++ LI G K+G E G KLL M + P+ +Y ++ G L K
Sbjct: 417 KGTQ-DPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPIL 475
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
A + + RM + S++ + H + ++ L D
Sbjct: 476 AYKTLERM----LKSSYLPKTSVFHSILSELLKND 506
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 9/229 (3%)
Query: 145 SKAIETLFDMPSYNCWPSVK--TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
SK T + ++ PS+ TF VL + S E + A++ G D+
Sbjct: 7 SKPWSTELESSLFSLSPSISKTTFFQVLRFIASPPKAFEF---FNWASRNGFAHDSRSYF 63
Query: 203 ILLKGLCENGNLEAA---FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
++L L NGNL A + ++ + + R +TL+ G EA L M
Sbjct: 64 MMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLM 123
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-GCYPNSASYQEVLYGLLDKKR 318
+S G+ +TFN L+ L K+G+ + + M G G P++ ++ ++ G
Sbjct: 124 KSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSM 183
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
E M P V+Y L+ GLC V V+K MV++
Sbjct: 184 VDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKK 232
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 154/335 (45%), Gaps = 18/335 (5%)
Query: 53 KDWLSPTEVL--KIFSNL---RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
+D L PT++ I + D +S +++L + + PN +Y+ II+ L + R
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
+++ ++ + + F D F YN + + +GR S A + L +M P V T+N
Sbjct: 272 SDAQNLFTEMQEKGI--FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
++N V + E + +Y G+ + + ++ G C+ L+AA ++ +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
C PN+ T++TL+ G C +++ LL M G+ ADT T+N LI G G +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER-----------MSP 336
+ LL+ M G P+ + +L GL D + +A E+ M + + P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y LI GL N+ + + + ++M +G VP
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 144/310 (46%), Gaps = 24/310 (7%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+L + +RK +P+ Y +IN + +F E++ E L R G N I
Sbjct: 312 LLQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYD----EMLPR---GIIPNTITY 363
Query: 137 YGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ G R+ A + M + C P++ TFN +++ AK + + +
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ D N L+ G G+L AA +L E P++ T TL+ GLC+ G +++
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Query: 252 AFGLLERMESE-----------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
A + + M+ G++ D T+NILISGL +GK E +L E M +G
Sbjct: 484 ALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 543
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P++ +Y ++ GL + R EA ++ M + SP+ V++ LI+G C V+D +
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Query: 361 LKKMVQQGFV 370
+M ++G V
Sbjct: 604 FCEMGRRGIV 613
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 6/248 (2%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ AI+ DM PSV F ++ ++V + + +Y + + D I
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+K C L A + K P+V T++TL+HGLC + V EA L +M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VTF L++GL ++G++ E + LL+RM G P +Y ++ G+ K A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 324 ELVGRMICERMS---PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE-I 379
L+ +M E +S P+ V Y +I LC D + +M ++G P + + I
Sbjct: 240 NLLRKM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 380 VGCVTFGK 387
VG + G+
Sbjct: 298 VGFCSSGR 305
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 122/264 (46%), Gaps = 1/264 (0%)
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
K+ KL D +N + + R+S+A+ M C P+V TF ++N L
Sbjct: 139 KITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK-QNCEPNVRTY 236
E + + G++ ++ G+C+ G+ +A +L + + + PNV Y
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
S ++ LC+ G +A L M+ +GI D T+N +I G G+ + +LL+ M
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+ P+ +Y ++ + + +F EA+EL M+ + P+ ++Y +I G C Q ++
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 357 VDWVLKKMVQQGFVPRMGMWREIV 380
+ + M +G P + + ++
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLI 402
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 142/292 (48%), Gaps = 15/292 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K +PN + +I+ AKR D +++ + L +D YN + I+G + G
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL--VADTTTYNTL-IHGFYLVGD 445
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-SAKLYGEIQ----------GIYTSAAKL 192
++ A++ L +M S P + T + +L+ L + KL ++ + S
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GVE D NIL+ GL G A + +E P + P+ TYS+++ GLC++ ++EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ + M S+ + VTF LI+G K G+V++G++L M +G N+ +Y ++ G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A ++ MI + P ++ + ++ GL +++ ++ +L+K+
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G E LE A + + + P+V + LM + + L ++ME +
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +F ILI K+ + ++ G +P+ ++ +L+GL + R EA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L +M P+ V++ L++GLC + + + +L +M++ G P + IV
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P YT++I + +++ + L D + YN I G + +A
Sbjct: 205 PTVITYTILIEATIVEGGINEAMKLLEEMLARGL--LPDMYTYNAIIRGMCKEGMVERAA 262
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E + + S C P V ++N++L ++ + E + + G E + +IL+ L
Sbjct: 263 ELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 322
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G ++ A VL ++ P+ +Y L+ LC++G ++ A G+++ M S G D
Sbjct: 323 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 382
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +N +++ L K G + +++ +++G GC PN +SY ++ L A +V
Sbjct: 383 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 442
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
MI + + P ++Y LI LC LVE+ +L M Q GF P
Sbjct: 443 MISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRP 485
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 134/297 (45%), Gaps = 3/297 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K Y P+ L T +I K + +M+ ++ D F YN + RI
Sbjct: 97 KGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTE---PDVFAYNAVISGFCKVNRI 153
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + L M + P + T+N+++ L + + G + IL
Sbjct: 154 EAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTIL 213
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++ G + A +L+E + P++ TY+ ++ G+C++G VE A L+ + S+G
Sbjct: 214 IEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGC 273
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +++NIL+ QGK +EG KL+ M +GC PN +Y ++ L R EA
Sbjct: 274 KPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAIS 333
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
++ MI + ++P SY LI LC + ++ ++ M+ G +P + + I+
Sbjct: 334 VLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILA 390
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 106/232 (45%), Gaps = 16/232 (6%)
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
I + LCRF GRI +AI L M P +++ +++ L
Sbjct: 317 ILISSLCRF----------------GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 360
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
GI G D N +L LC+NGN A + ++ C PNV +Y
Sbjct: 361 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 420
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+T++ L G+ A G++ M S+G+D D +T+N LIS L + G VEE + LL+ M+
Sbjct: 421 NTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 480
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
G P SY VL GL +R +A + MI + P+ +Y LI G+
Sbjct: 481 SGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 145/318 (45%), Gaps = 11/318 (3%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
F N+ V+ +L +++ P+ Y +I+ + R +A ++ R+K
Sbjct: 116 FKNIEKASRVMEILESHTE-----PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGF-- 168
Query: 125 FSDGFFYNVIKIYGNMAGR--ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
D YN++ G++ R + A++ L + NC P+V T+ +++ + E
Sbjct: 169 LPDIVTYNIM--IGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEA 226
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ G+ D N +++G+C+ G +E A ++ + C+P+V +Y+ L+
Sbjct: 227 MKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRA 286
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
+G +E L+ M S G + + VT++ILIS L + G+++E + +L+ M K P+
Sbjct: 287 FLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPD 346
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+ SY ++ L + R A ++ MI P V+Y ++ LC +
Sbjct: 347 TYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFN 406
Query: 363 KMVQQGFVPRMGMWREIV 380
K+ G P + + ++
Sbjct: 407 KLRGMGCPPNVSSYNTMI 424
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 126/283 (44%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y II + + + +++ + K C+ D YN++ G+ +
Sbjct: 240 PDMYTYNAIIRGMCKEGMVERAAELITSL-TSKGCK-PDVISYNILLRAFLNQGKWDEGE 297
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + +M S C P+ T++++++ L E + + + D + L+ L
Sbjct: 298 KLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 357
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G L+ A ++D C P++ Y+T++ LC+ GN +A + ++ G +
Sbjct: 358 CKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNV 417
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++N +IS L G + ++ M KG P+ +Y ++ L EA L+
Sbjct: 418 SSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDD 477
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M P+ +SY ++ GLC + ++D + +M+++G P
Sbjct: 478 MEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRP 520
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 6/226 (2%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
F + + ISV+ V+ + K+ P+ Y +I+ L + R D IM + + C
Sbjct: 325 FGRIDEAISVLKVMIE----KELTPDTYSYDPLISALCKEGRLDLAIGIMDYM-ISNGC- 378
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
D YN I G ++A+E + C P+V ++N +++ L S G
Sbjct: 379 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 438
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ + GV+ D N L+ LC +G +E A +LD+ + P V +Y+ ++ GLC
Sbjct: 439 MVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 498
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
+ +++A G+ M +G + T+ +LI G+ G E M+L
Sbjct: 499 KVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 544
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 154/335 (45%), Gaps = 18/335 (5%)
Query: 53 KDWLSPTEVL--KIFSNL---RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
+D L PT++ I + D +S +++L + + PN +Y+ II+ L + R
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
+++ ++ + + F D F YN + + +GR S A + L +M P V T+N
Sbjct: 272 SDAQNLFTEMQEKGI--FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
++N V + E + +Y G+ + + ++ G C+ L+AA ++ +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
C PN+ T++TL+ G C +++ LL M G+ ADT T+N LI G G +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER-----------MSP 336
+ LL+ M G P+ + +L GL D + +A E+ M + + P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y LI GL N+ + + + ++M +G VP
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 144/310 (46%), Gaps = 24/310 (7%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+L + +RK +P+ Y +IN + +F E++ E L R G N I
Sbjct: 312 LLQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYD----EMLPR---GIIPNTITY 363
Query: 137 YGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ G R+ A + M + C P++ TFN +++ AK + + +
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ D N L+ G G+L AA +L E P++ T TL+ GLC+ G +++
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Query: 252 AFGLLERMESE-----------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
A + + M+ G++ D T+NILISGL +GK E +L E M +G
Sbjct: 484 ALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 543
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P++ +Y ++ GL + R EA ++ M + SP+ V++ LI+G C V+D +
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Query: 361 LKKMVQQGFV 370
+M ++G V
Sbjct: 604 FCEMGRRGIV 613
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 6/248 (2%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ AI+ DM PSV F ++ ++V + + +Y + + D NI
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+K C L A + K P+V T++TL+HGLC + V EA L +M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VTF L++GL ++G++ E + LL+RM G P +Y ++ G+ K A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 324 ELVGRMICERMS---PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE-I 379
L+ +M E +S P+ V Y +I LC D + +M ++G P + + I
Sbjct: 240 NLLRKM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 380 VGCVTFGK 387
VG + G+
Sbjct: 298 VGFCSSGR 305
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 139/303 (45%), Gaps = 5/303 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + ++ + + +R D + + Q+++ +++ D + +N++ ++ A+
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQI--RCDIYSFNILIKCFCSCSKLPFAL 134
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
T + P V TF +L+ L E ++ + + L+ GL
Sbjct: 135 STFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGL 194
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES-EGIDAD 267
C G + A +LD + +P TY T++ G+C+KG+ A LL +ME I +
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPN 254
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V ++ +I L K G+ + L M+ KG +P+ +Y ++ G R+ +A++L+
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
M+ ++SP V+Y LI+ + + + + +M+ +G +P + ++ F K
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID--GFCK 372
Query: 388 DNR 390
NR
Sbjct: 373 QNR 375
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 113/239 (47%), Gaps = 1/239 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+S+A+ M C P+V TF ++N L E + + G++
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223
Query: 203 ILLKGLCENGNLEAAFYVLDEFPK-QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++ G+C+ G+ +A +L + + + PNV YS ++ LC+ G +A L M+
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI D T+N +I G G+ + +LL+ M + P+ +Y ++ + + +F E
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A+EL M+ + P+ ++Y +I G C Q ++ + + M +G P + + ++
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 142/292 (48%), Gaps = 15/292 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K +PN + +I+ AKR D +++ + L +D YN + I+G + G
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL--VADTTTYNTL-IHGFYLVGD 445
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-SAKLYGEIQ----------GIYTSAAKL 192
++ A++ L +M S P + T + +L+ L + KL ++ + S
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GVE D NIL+ GL G A + +E P + P+ TYS+++ GLC++ ++EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ + M S+ + VTF LI+G K G+V++G++L M +G N+ +Y ++ G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A ++ MI + P ++ + ++ GL +++ ++ +L+K+
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G E LE A + + + P+V + LM + + L ++ME +
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +FNILI K+ + ++ G +P+ ++ +L+GL + R EA
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L +M P+ V++ L++GLC + + + +L +M++ G P + IV
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 120/227 (52%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + PS + + ++ A+ G+ K G ++ +NI+LKGLC NG
Sbjct: 100 MTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGG 159
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A ++ E +++ P++ +Y+TL++GLC+ ++EA GLL ME+ G ++VT
Sbjct: 160 VFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTT 219
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ GL K G+++E M+LLE MK KG + Y ++ G + KEL M+ +
Sbjct: 220 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 279
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+S + V+Y L+HGLC ++ + VL M + G P + + ++
Sbjct: 280 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 326
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 119/227 (52%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A+ + +M + P + ++N ++N L AK E G+ G ++
Sbjct: 158 GGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTC 217
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC++G ++ A +L+ K+ + +V Y TL+ G C GN++ L + M
Sbjct: 218 TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG 277
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI A+ VT++ L+ GL + G+ +E +L M G +P+ +Y ++ GL R
Sbjct: 278 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 337
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A +L+ M+ + PS V+Y L+ GLC + LV D +L+ M+++G
Sbjct: 338 AMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 384
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 103/210 (49%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
+V N+VL L E G+ + V D N L+ GLC+ L+ A +L
Sbjct: 143 NVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL 202
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
E C PN T +TLM GLC+ G ++EA LLE M+ +G DAD V + LISG
Sbjct: 203 LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNN 262
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G ++ G +L + M GKG N +Y +++GL ++ EA ++ M + P V+Y
Sbjct: 263 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 322
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
LI GLC +L MV++G P
Sbjct: 323 TGLIDGLCKDGRATHAMDLLNLMVEKGEEP 352
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 107/216 (49%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A ++ +A+ L +M + C+P+ T +++ L E + + K G + D
Sbjct: 192 AKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVL 251
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G C NGNL+ + DE + NV TYS L+HGLC G +EA +L M
Sbjct: 252 YGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 311
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI D VT+ LI GL K G+ M LL M KG P++ +Y +L GL +
Sbjct: 312 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVI 371
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+A +++ MI + V+Y L+ GLC++ V++
Sbjct: 372 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDE 407
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 13/249 (5%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ ++A+ +N PS T N +++ L ++ YG +Y + V L+
Sbjct: 54 QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLS 113
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L++ + + F V+ K+ NV + ++ GLC G V EA GL+ M +
Sbjct: 114 ALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK 173
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ D V++N LI+GL K K++E + LL M+ GC+PNS + ++ GL R EA
Sbjct: 174 SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEA 233
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF------------- 369
EL+ M + V Y LI G CN ++ + +M+ +G
Sbjct: 234 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHG 293
Query: 370 VPRMGMWRE 378
+ R+G W+E
Sbjct: 294 LCRLGQWKE 302
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 139/314 (44%), Gaps = 4/314 (1%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
D ++ ++ + K+ D Y ++ L + D + + + C + F
Sbjct: 372 DAFKILRMMIEKGKKADV----VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVF 427
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+N++ GR++KA++ M ++ T+N++L + A E ++
Sbjct: 428 TFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV 487
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
LG ++ +IL+ G C+ L A + E P + Y+TLM LC++G++
Sbjct: 488 LDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 547
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E+A L + M + + D ++FN +I G K G + +L +M G P++ ++ +
Sbjct: 548 EQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTL 607
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ L EAK + RM+ +P + Y L+ GL ++ ++ +L +M +G
Sbjct: 608 INRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGT 667
Query: 370 VPRMGMWREIVGCV 383
V + I+ C+
Sbjct: 668 VLDRKIVSTILTCL 681
>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
Length = 649
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 150/320 (46%), Gaps = 40/320 (12%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK +PNEA ++++I+ L Q D+ ++++ ++EK D YN+I + GR
Sbjct: 320 RKGCSPNEATFSMLISSLCQNNLVDSAVEVLE--QMEKYGCEPDTVNYNIIINSLSERGR 377
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ L M C P FN VL A+ + + + + + NI
Sbjct: 378 VDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNI 434
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM---- 259
L+ LC+NG + A V ++ P+ C P++ TYS+L++G E+G VE A L M
Sbjct: 435 LIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKP 494
Query: 260 --------------------------ESEGIDA--DTVTFNILISGLRKQGKVEEGMKLL 291
E G D + VTFNILI+ L ++G V+ +++L
Sbjct: 495 DIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVL 554
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E+M G P+ +Y ++ G ++ R +A +L+ M C+ P +SY + GLC
Sbjct: 555 EQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRA 611
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
+ +D + ++ +M++ P
Sbjct: 612 ERWQDAEELVAEMLRNKCTP 631
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 135/261 (51%), Gaps = 10/261 (3%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ + ++ +A+R+ DA E I Q + + C + F N++ G ++ A
Sbjct: 392 PDALGFNAVLKGFCRAERWHDASELIAQMFRDD--CPLIEMTF-NILIDTLCQNGLVNYA 448
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ MP Y C P + T++ +LN L ++ S + + D N +LKG
Sbjct: 449 TQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRS---MPCKPDIFSYNAVLKG 505
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC E A ++ E ++C PN T++ L++ LC+KG V+ A +LE+M + G D
Sbjct: 506 LCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 565
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+N LI+G +QG++++ +KLL M C P++ SY L GL +R+ +A+ELV
Sbjct: 566 IFTYNALINGFSEQGRLDDALKLLSTMS---CKPDAISYNSTLKGLCRAERWQDAEELVA 622
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M+ + +P+ V++K H L
Sbjct: 623 EMLRNKCTPNEVTFKYANHLL 643
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 137/294 (46%), Gaps = 12/294 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK--IYGNMAGRISK 146
PN Y + L A+R++ I ++M + V K C ++ F +I N+ +
Sbjct: 290 PNTVCYNAALKGLCIAERWEDIGELMAEM-VRKGCSPNEATFSMLISSLCQNNL---VDS 345
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+E L M Y C P +N+++N L G + + + DA N +LK
Sbjct: 346 AVEVLEQMEKYGCEPDTVNYNIIINSLSE---RGRVDDALRLLNSMVCKPDALGFNAVLK 402
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C A ++ + + +C T++ L+ LC+ G V A + E+M
Sbjct: 403 GFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTP 462
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D VT++ L++G +QG VE ++L M C P+ SY VL GL R+ +A EL+
Sbjct: 463 DIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELI 519
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + P+ V++ LI+ LC + LV+ VL++M G P + + ++
Sbjct: 520 AEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 573
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 135/283 (47%), Gaps = 8/283 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L AK+++ E + + C ++ F I+ + G + +A+
Sbjct: 188 PDTYTYNTVLKGLCIAKKWEEAE-ELMAEMIRNRCPPNEVTFATQIRSFCQ-NGLLDRAV 245
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L MP Y C P V ++ ++N G + + + + C N LKGL
Sbjct: 246 QLLDQMPRYGCTPDVVIYSTLINGFSEQ---GHVDQALDLLNTMLCKPNTVCYNAALKGL 302
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C E ++ E ++ C PN T+S L+ LC+ V+ A +LE+ME G + DT
Sbjct: 303 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 362
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +NI+I+ L ++G+V++ ++LL M C P++ + VL G +R+ +A EL+ +
Sbjct: 363 VNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQ 419
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + +++ LI LC LV V ++M + P
Sbjct: 420 MFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTP 462
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
A + V D N +LKGLC E A ++ E + C PN T++T + C+ G +
Sbjct: 182 ASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLL 241
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+ A LL++M G D V ++ LI+G +QG V++ + LL M C PN+ Y
Sbjct: 242 DRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAA 298
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L GL +R+ + EL+ M+ + SP+ ++ LI LC LV+ VL++M + G
Sbjct: 299 LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGC 358
Query: 370 VP 371
P
Sbjct: 359 EP 360
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 5/179 (2%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+K LC G L A VLD V +++TL+ G C G + +A +L +
Sbjct: 94 NILIKKLCATGRLADAERVLDALKAAAAADAV-SHNTLVAGYCRDGRLADAERVLGAARA 152
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G A+ VT+ LI G + G++++ ++L+ M P++ +Y VL GL K++ E
Sbjct: 153 TGA-ANVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEE 208
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A+EL+ MI R P+ V++ I C L++ +L +M + G P + ++ ++
Sbjct: 209 AEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLI 267
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 136/300 (45%), Gaps = 3/300 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + + +T ++ L KR DI+ R ++ +L + F YN++ R
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR-RMTQLGCIPNVFSYNILLKGLCDENR 177
Query: 144 ISKAIETLFDMP--SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+A+E L MP +C P V ++ V+N + G Y G+ +
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ LC+ ++ A VL K PN RTY++++HG C G +EA G L++M S
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G++ D VT+N L+ L K G+ E K+ + M +G P +Y +L G K E
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
L+ M+ + P+ + LI Q V+ V KM QQG P + ++G
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 120/269 (44%), Gaps = 12/269 (4%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG--- 142
D P+ YT +IN + D + G NV+ +A
Sbjct: 194 DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM-------LDRGILPNVVTYSSIIAALCK 246
Query: 143 --RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ KA+E L M P+ +T+N +++ S+ E G GVE D
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ LC+NG A + D K+ +P + TY TL+ G KG + E GLL+ M
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI + F+ILI KQGKV++ M + +M+ +G P++ +Y V+ L R
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLC 349
+A +MI ER+SP + Y LIH LC
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 23/329 (6%)
Query: 70 DPISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFD-AIEDI 113
D +S +V+N + K D + PN Y+ II L +A+ D A+E +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 114 MQRIK--VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+K V CR YN I +G+ +AI L M S P V T+N +++
Sbjct: 258 TSMVKNGVMPNCRT-----YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L E + ++ S K G++ + LL+G G L +LD + P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N +S L+ ++G V++A + +M +G++ DTVT+ +I L K G+VE+ M+
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E+M + P + Y +++ L ++ +AKEL+ M+ + + + +I C +
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V + + + MV+ G P + + ++
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLI 521
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 2/274 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +PN +++++I A+ + D + +++ + L D Y + +GR
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL--NPDTVTYGTVIGILCKSGR 424
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ M P +N +++ L + + + + G+ +D N
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C+ G + + + D + +P++ TYSTL+ G C G ++EA LL M S G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D VT+N LI+G K ++E+ + L M+ G P+ +Y +L GL +R AK
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
EL + +Y ++HGLC L ++
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 127/294 (43%), Gaps = 4/294 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P +Y +I+ L ++D ++++ + +C D F+N I GR+ ++
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL--DTIFFNSIIDSHCKEGRVIES 498
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E LFD M P + T++ +++ A E + S +G++ D N L+
Sbjct: 499 -EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+ +E A + E P++ TY+ ++ GL + A L + G
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T+NI++ GL K +E +++ + + + ++ ++ LL R EAK+L
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P +Y + L Q L+E++D + M + G M IV
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PN+ TY L+ C G ++ F L + +G D + F L+ GL + + M +
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 291 -LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE--RMSPSFVSYKKLIHG 347
L RM GC PN SY +L GL D+ R EA EL+ M + P VSY +I+G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ ++ +M+ +G +P + + I+ +
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAAL 244
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 102/242 (42%), Gaps = 8/242 (3%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDI---MQRIKVEKLCRFSDGFFYNVIKIYGNM 140
R P+ Y+ +I+ A + D + M + ++ C + KI
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKI---- 562
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
R+ A+ +M S P + T+N++L L + + +Y + G +++
Sbjct: 563 -SRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI+L GLC+N + A + + + RT++ ++ L + G +EA L +
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T++++ L +QG +EE L M+ GC NS ++ LL +
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 741
Query: 321 EA 322
A
Sbjct: 742 RA 743
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 7/297 (2%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+ N+ KR P + +IN L +++ D E + +E+ + D F Y+V+ I
Sbjct: 245 IFNEIRKR-GLRPTTVSFNTLINGLCKSRNLD--EGFRLKKTMEENRIYPDVFTYSVL-I 300
Query: 137 YG-NMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+G GR+ A E LFD M P+ TF +++ ++ Y +GV
Sbjct: 301 HGLCKEGRLDVA-EQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGV 359
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ D N LL GLC+ G++ A ++DE +P+ TY+TL+ G C++G++E A
Sbjct: 360 KPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAME 419
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ + M EG+ D V F LISG + G+V + + L M G P+ A+Y V+ G
Sbjct: 420 IRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYC 479
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K +L+ M P ++Y L++GLC Q +++ + +L+ M+ G P
Sbjct: 480 KKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTP 536
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%)
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
Y P V+ +N+++N + + I+ K G+ N L+ GLC++ NL+
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDE 276
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
F + + P+V TYS L+HGLC++G ++ A L + M+ G+ + +TF LI
Sbjct: 277 GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALID 336
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G + +++ M +M G P+ Y +L GL +A++LV M M P
Sbjct: 337 GQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKP 396
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
++Y LI G C + +E + K M ++G V
Sbjct: 397 DKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 15/282 (5%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL----- 151
II L K D+ + I R S+ F ++ + I +G +S AI+
Sbjct: 123 IIRFLVSRKGKDSAASVFAAILDTAGTRCSN-FVFDALMIAYWDSGFVSDAIQCFRLVRN 181
Query: 152 --FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
F +P + C +L+ ++++ I Y+ + G NIL+ C
Sbjct: 182 SNFQIPFHGC-------GYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFC 234
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G++ A + +E K+ P +++TL++GLC+ N++E F L + ME I D
Sbjct: 235 KEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVF 294
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+++LI GL K+G+++ +L + M+ +G PN ++ ++ G +R A +M
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQM 354
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + P V Y L++GLC V ++ +M G P
Sbjct: 355 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKP 396
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 130/292 (44%), Gaps = 5/292 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++I+ L + R D E + ++ L +G + + + RI A+
Sbjct: 291 PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGL--RPNGITFTALIDGQCRSRRIDSAM 348
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
T M + P + +N +LN L + + + +G++ D L+ G
Sbjct: 349 NTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGY 408
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G+LE+A + ++ + ++ L+ G C G V +A L M G+ D
Sbjct: 409 CKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDD 468
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+ ++I G K+G V+ G KLL+ M+ G P +Y ++ GL + + A L+
Sbjct: 469 ATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEA 528
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ ++P ++Y L+ G C ED +LK ++G + + +V
Sbjct: 529 MLNLGVTPDDITYNILLEGHCKNGKAED---LLKLRNEKGLIVDYAYYTSLV 577
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 87/168 (51%), Gaps = 1/168 (0%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P V+ Y+ L++ C++G++ +A + + G+ TV+FN LI+GL K ++EG +L
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+ M+ YP+ +Y +++GL + R A++L M + P+ +++ LI G C
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTE 397
+ ++ +M+ G P + M+ ++ G G N+ R V E
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDE 388
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 161/309 (52%), Gaps = 12/309 (3%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
LRD + V++++ +R PN + I+ +A R + ++R++V +
Sbjct: 260 QLRDALKVLTLM----QRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGI--VP 313
Query: 127 DGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
+ YN +I+ Y ++ R+ +AIE L DMPS C P ++ ++ L K E++ +
Sbjct: 314 NVVTYNCMIRGYCDLH-RVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDL 372
Query: 186 YTSAAK-LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
AK G+ D N L+ L ++ + + A + L + ++ + YS ++H LC
Sbjct: 373 MKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALC 432
Query: 245 EKGNVEEAFGLLERMESEG-IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
++G + EA L+ M S+G D VT+ +++G + G+V++ KLL+ M G PN+
Sbjct: 433 KEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNT 492
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLK 362
SY +L GL + EA+E++ + SP+ ++Y L+HGL + KL E D V++
Sbjct: 493 VSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACD-VVR 551
Query: 363 KMVQQGFVP 371
+MV +GF P
Sbjct: 552 EMVLKGFFP 560
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 148/334 (44%), Gaps = 58/334 (17%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
+RD ++ ++++ +K + +EAL+ L K A+ K F I+ + V LC+
Sbjct: 383 VRDQVTYNTLIHMLTKHD--HADEALWFL---KDAEEKGF-RIDKVGYSAIVHALCK--- 433
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
GR+S+A + + +M S +C P V T+ V+N + + +
Sbjct: 434 -------------EGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLL 480
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
G + + LL GLC G A +++ +Q PN TYS LMHGL ++
Sbjct: 481 QIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKE 540
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G + EA ++ M +G V N+L+ L + G+ E K +E KGC N ++
Sbjct: 541 GKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNF 600
Query: 307 QEVLYG------------LLD-----------------------KKRFPEAKELVGRMIC 331
V++G +LD K R EA EL+ +M+
Sbjct: 601 TTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLH 660
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+ + P+ V+Y+ +IH C + V+D+ +L+KM+
Sbjct: 661 KGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMI 694
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 136/295 (46%), Gaps = 14/295 (4%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
++N+ + P+ YT ++N + D + ++Q + + G+ N +
Sbjct: 443 LINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIM-------HTHGYKPNTVSY 495
Query: 137 YGNMAG--RISKAIET--LFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ G R K++E + +M W P+ T++++++ L E +
Sbjct: 496 TALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVL 555
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G +N+LL+ LC +G A ++E + C NV ++T++HG C+ ++
Sbjct: 556 KGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDA 615
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A +L+ M AD T+ L+ L K+G++ E +L+++M KG P +Y+ V++
Sbjct: 616 ALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 675
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ + ++ +MI + + Y ++I LC +E+ D +L K+++
Sbjct: 676 RYCQMEKVDDLVAILEKMILRQKCKTI--YNQVIEKLCGLGKLEEADKLLGKVLR 728
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G L A VL + EPN+ +T + +E+A LERM+ GI + VT+
Sbjct: 259 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 318
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N +I G +VEE ++LL+ M KGC P+ SY ++ L +KR E ++L+ +M
Sbjct: 319 NCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 378
Query: 332 ER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
E + V+Y LIH L ++ W LK ++GF
Sbjct: 379 EHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGF 417
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 100/248 (40%), Gaps = 40/248 (16%)
Query: 164 KTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
+T L ++VS G+++ + T + GVE + N + LE A
Sbjct: 243 RTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRF 302
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE------------------ 262
L+ PNV TY+ ++ G C+ VEEA LL+ M S+
Sbjct: 303 LERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCK 362
Query: 263 ------------------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
G+ D VT+N LI L K +E + L+ + KG +
Sbjct: 363 EKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKV 422
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
Y +++ L + R EAK+L+ M+ + P V+Y +++G C V+ +L+
Sbjct: 423 GYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQI 482
Query: 364 MVQQGFVP 371
M G+ P
Sbjct: 483 MHTHGYKP 490
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 2/164 (1%)
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
FY D + +P V Y +++ L + + A +L M+ GI F ++
Sbjct: 197 FYWADRQWRYRHDPMV--YYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVS 254
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
+ G++ + +K+L M+ G PN + + R +A + RM + P+
Sbjct: 255 YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPN 314
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
V+Y +I G C+ VE+ +L M +G +P + I+G
Sbjct: 315 VVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMG 358
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 142/291 (48%), Gaps = 5/291 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMA- 141
R+ P + ++IN L + + + DI++ +KV + ++ YN +I Y M
Sbjct: 156 RRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVS--ANVITYNTLIDGYCKMGK 213
Query: 142 -GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ KA L +M + P+ TFN++++ K ++ + GV+ +
Sbjct: 214 IGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVT 273
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ GLC NG + A + D+ +PN+ T++ L++G C+ V++A L + M
Sbjct: 274 YNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMP 333
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+GI + T+NILI K +E+ L M GKG P+ ++Y ++ GL K
Sbjct: 334 KQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLE 393
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A+ LV M + + ++Y LI LCN+ ++ +L +M ++G P
Sbjct: 394 AARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKP 444
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 146/298 (48%), Gaps = 15/298 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------G 142
PNE + ++I+ + K A + + + G NV+ Y ++ G
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQ-------GVKPNVV-TYNSLINGLCNNG 285
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++++A M + P++ T N +LN K+ + ++ K G+ + N
Sbjct: 286 KVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYN 345
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C++ N+E AF + + P+V TY+ L+ GLC KG++E A L+ M+++
Sbjct: 346 ILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTK 405
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ AD +T+NILI L +G++++ ++LL+ M KG P+ +Y ++ G + A
Sbjct: 406 HLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAA 465
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L +M + +Y LI G C + +ED + +L +M+++G +P M EIV
Sbjct: 466 LNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNR-MTYEIV 522
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 118/241 (48%), Gaps = 3/241 (1%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R E Y SV + N +++ LV G+++ +Y + +E N
Sbjct: 108 RTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFN 167
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF---GLLERM 259
I++ GLC+ G L A ++++ + NV TY+TL+ G C+ G + + + +L+ M
Sbjct: 168 IVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEM 227
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
++GI + VTFNILI G K V MK+ M +G PN +Y ++ GL + +
Sbjct: 228 RADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKV 287
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA L +M+ + P+ +++ L++G C K+V+ + M +QG P + + +
Sbjct: 288 NEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNIL 347
Query: 380 V 380
+
Sbjct: 348 I 348
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 138/289 (47%), Gaps = 20/289 (6%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ PN Y +IN L + + E R ++ C + +N + + G +
Sbjct: 264 RQGVKPNVVTYNSLINGLCNNGKVN--EATALRDQMVNSCLKPNIITHNAL-LNGFCKNK 320
Query: 144 ISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ K LFD MP P+V T+N++++ + + +Y GV D N
Sbjct: 321 MVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYN 380
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC G+LEAA ++ E ++ + ++ TY+ L+ LC KG +++A LL+ M +
Sbjct: 381 CLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRK 440
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ +T+N +I G K+G + + L +M+ G N A+Y ++ G K + +A
Sbjct: 441 GLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDA 500
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ M+ + + P+ ++Y + V ++M+++GFVP
Sbjct: 501 NGLLNEMLEKGLIPNRMTY----------------EIVTEEMMEKGFVP 533
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 3/224 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF-- 218
P++ +FN+V+N L + I GV + N L+ G C+ G + +
Sbjct: 161 PTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKA 220
Query: 219 -YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+L E PN T++ L+ G C+ NV A + M +G+ + VT+N LI+G
Sbjct: 221 DAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLING 280
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L GKV E L ++M PN ++ +L G K +A EL M + ++P+
Sbjct: 281 LCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPN 340
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+Y LI C + +ED + + M+ +G P + + ++
Sbjct: 341 VTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIA 384
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 9/219 (4%)
Query: 192 LGVEIDACCLN-----ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
L V D+ C N IL+ +N F + +V + + LM GL +
Sbjct: 82 LSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKV 141
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G + + + + M I+ ++FNI+I+GL K GK+ + ++E MK +G N +Y
Sbjct: 142 GEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITY 201
Query: 307 QEVLYGLLDKKRFP---EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
++ G + +A ++ M + + P+ V++ LI G C K V V +
Sbjct: 202 NTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAE 261
Query: 364 MVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETVDS 401
M +QG P + + ++ G GK N + V+S
Sbjct: 262 MNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNS 300
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 127/252 (50%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+ YN++ G + K + +M C P+V T+N +++ E G+ S
Sbjct: 11 YTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKS 70
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ G++ + N+++ GLC G+++ A+ +L+E + P+ TY+TL++G C++GN
Sbjct: 71 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 130
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+A + M G+ VT+ LI+ + K + M+ ++M+ +G PN +Y
Sbjct: 131 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 190
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + EA ++ M SPS V+Y IHG C + +E+ V+++MV++G
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250
Query: 369 FVPRMGMWREIV 380
P + + I+
Sbjct: 251 LAPDVVSYSTII 262
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 157/341 (46%), Gaps = 32/341 (9%)
Query: 70 DPISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIM 114
D ++ ++LN Y K +++ P+ YT +IN + +A+ + +
Sbjct: 114 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 173
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
++++ L R ++ + +I + + G +++A L +M PSV T+N ++
Sbjct: 174 DQMRIRGL-RPNERTYTTLIDGF-SRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC 231
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
+ E G+ + G+ D + ++ G C G L+ AF + E ++ P+
Sbjct: 232 VLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAV 291
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TYS+L+ GLCE + EA L + M G+ D T+ LI+ +G + + + L + M
Sbjct: 292 TYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEM 351
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH-------- 346
KG P++ +Y ++ GL + R EAK L+ ++I E PS V+Y LI
Sbjct: 352 IHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFK 411
Query: 347 -------GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
G C + L+ + D V + MV++ P ++ I+
Sbjct: 412 SVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVII 452
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 114/242 (47%), Gaps = 1/242 (0%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+ +I Y M GRI +A L M S P++ ++N+++N L E I
Sbjct: 48 YNTLIDAYCKM-GRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 106
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G D N LL G C+ GN A + E + P+V TY+ L++ +C+ N+
Sbjct: 107 GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 166
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
A ++M G+ + T+ LI G +QG + E ++L M G P+ +Y
Sbjct: 167 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 226
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
++G +R EA +V M+ + ++P VSY +I G C + ++ + ++MV++G
Sbjct: 227 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286
Query: 370 VP 371
P
Sbjct: 287 SP 288
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 133/287 (46%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN Y +IIN L + +I++ + + D YN + G
Sbjct: 74 KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFT--PDEVTYNTLLNGYCKEGNF 131
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ +M PSV T+ ++N + A+ + G+ + L
Sbjct: 132 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 191
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G G L A+ +L+E + P+V TY+ +HG C +EEA G+++ M +G+
Sbjct: 192 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 251
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D V+++ +ISG ++G+++ ++ + M KG P++ +Y ++ GL + +R EA +
Sbjct: 252 APDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACD 311
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L M+ + P +Y LI+ C + + + +M+ +GF+P
Sbjct: 312 LSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLP 358
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I+ + R D +++ + + + + YNVI G + +A
Sbjct: 43 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQ--PNLISYNVIINGLCREGSMKEAW 100
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M P T+N +LN + + I+ + GV L+ +
Sbjct: 101 EILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSM 160
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ NL A D+ + PN RTY+TL+ G +G + EA+ +L M G
Sbjct: 161 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 220
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N I G ++EE + +++ M KG P+ SY ++ G K A ++
Sbjct: 221 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 280
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + +SP V+Y LI GLC + + + + ++M+ G P
Sbjct: 281 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPP 323
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQ---GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
P+V T+N+++ S GE+Q G + + G + N L+ C+ G ++ A
Sbjct: 8 PNVYTYNILIRGFCSV---GELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEA 64
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
F +L + +PN+ +Y+ +++GLC +G+++EA+ +LE M +G D VT+N L++G
Sbjct: 65 FGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
K+G + + + M G P+ +Y ++ + + A E +M + P+
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y LI G Q L+ + +L +M + GF P
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSP 218
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%)
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
+ PNV TY+ L+ G C G +++ G ME G + VT+N LI K G+++
Sbjct: 3 RSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRID 62
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
E LL+ M KG PN SY ++ GL + EA E++ M + +P V+Y L+
Sbjct: 63 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 122
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+G C + + +MV+ G P + + ++
Sbjct: 123 NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALI 157
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 112/267 (41%), Gaps = 18/267 (6%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
+ Q K +P+ Y+ +I L + +R D+ Q + L D F Y +
Sbjct: 277 MKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLP--PDEFTYTTLINA 334
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG-----IYTSAAKL 192
+ G ++KA+ +M P T+++++N L E + IY +
Sbjct: 335 YCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPS 394
Query: 193 GVEIDAC---CLNI-------LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
V D C NI L+KG C G + A V + ++N +P Y+ ++HG
Sbjct: 395 DVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHG 454
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
C GN+ +AF L + M G TVT LI L K+G EE +++ + C N
Sbjct: 455 HCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL-RSCRLN 513
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRM 329
A +VL + K+ EA V R+
Sbjct: 514 EAELAKVLVEINHKEGNMEAVLNVSRL 540
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 154/335 (45%), Gaps = 18/335 (5%)
Query: 53 KDWLSPTEVL--KIFSNL---RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
+D L PT++ I + D +S +++L + + PN +Y+ II+ L + R
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
+++ ++ + + F D F YN + + +GR S A + L +M P V T+N
Sbjct: 272 SDAQNLFTEMQEKGI--FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
++N V + E + +Y G+ + + ++ G C+ L+AA ++ +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
C PN+ T++TL+ G C +++ LL M G+ ADT T+N LI G G +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER-----------MSP 336
+ LL+ M G P+ + +L GL D + +A E+ M + + P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y LI GL N+ + + + ++M +G VP
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 144/310 (46%), Gaps = 24/310 (7%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+L + +RK +P+ Y +IN + +F E++ E L R G N I
Sbjct: 312 LLQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYD----EMLPR---GIIPNTITY 363
Query: 137 YGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ G R+ A + M + C P++ TFN +++ AK + + +
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ D N L+ G G+L AA +L E P++ T TL+ GLC+ G +++
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Query: 252 AFGLLERMESE-----------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
A + + M+ G++ D T+NILISGL +GK E +L E M +G
Sbjct: 484 ALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 543
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P++ +Y ++ GL + R EA ++ M + SP+ V++ LI+G C V+D +
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Query: 361 LKKMVQQGFV 370
+M ++G V
Sbjct: 604 FCEMGRRGIV 613
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 6/248 (2%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ AI+ DM PSV F ++ ++V + + +Y + + D I
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+K C L A + K P+V T++TL+HGLC + V EA L +M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VTF L++GL ++G++ E + LL+RM G P +Y ++ G+ K A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 324 ELVGRMICERMS---PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE-I 379
L+ +M E +S P+ V Y +I LC D + +M ++G P + + I
Sbjct: 240 NLLRKM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 380 VGCVTFGK 387
VG + G+
Sbjct: 298 VGFCSSGR 305
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 122/264 (46%), Gaps = 1/264 (0%)
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
K+ KL D +N + + R+S+A+ M C P+V TF ++N L
Sbjct: 139 KLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK-QNCEPNVRTY 236
E + + G++ ++ G+C+ G+ +A +L + + + PNV Y
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
S ++ LC+ G +A L M+ +GI D T+N +I G G+ + +LL+ M
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+ P+ +Y ++ + + +F EA+EL M+ + P+ ++Y +I G C Q ++
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 357 VDWVLKKMVQQGFVPRMGMWREIV 380
+ + M +G P + + ++
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLI 402
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 142/292 (48%), Gaps = 15/292 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K +PN + +I+ AKR D +++ + L +D YN + I+G + G
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL--VADTTTYNTL-IHGFYLVGD 445
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-SAKLYGEIQ----------GIYTSAAKL 192
++ A++ L +M S P + T + +L+ L + KL ++ + S
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GVE D NIL+ GL G A + +E P + P+ TYS+++ GLC++ ++EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ + M S+ + VTF LI+G K G+V++G++L M +G N+ +Y ++ G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A ++ MI + P ++ + ++ GL +++ ++ +L+K+
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G E LE A + + + P+V + LM + + L ++ME +
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +F ILI K+ + ++ G +P+ ++ +L+GL + R EA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L +M P+ V++ L++GLC + + + +L +M++ G P + IV
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 23/263 (8%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ A L +M NC P+ T N++L+ L + E + + + G +D
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTC 469
Query: 202 NILLKGLCENGNLEAAFYVL-----------------------DEFPKQNCEPNVRTYST 238
NI++ GLC +G L+ A ++ D + NC P++ TYST
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L++GLC+ G EA L M E + D++ +NI I KQGK+ ++L+ M+ KG
Sbjct: 530 LLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C+ + +Y ++ GL K + E L+ M + +SP+ +Y I LC VED
Sbjct: 590 CHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDAT 649
Query: 359 WVLKKMVQQGFVPRMGMWREIVG 381
+L +M+Q+ P + ++ ++G
Sbjct: 650 NLLDEMMQKNIAPNVFSFKYLIG 672
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 103/201 (51%), Gaps = 4/201 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + +N++L + + + +Y G+ + N+L++ LC++ ++AA +
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
DE P++ C+PN T+ L+ G C+ G ++ LL MES G+ + V +N ++S +
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCR 229
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM----SP 336
+G+ ++ KL+E+M+ +G P+ ++ + L + + +A + M + P
Sbjct: 230 EGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 337 SFVSYKKLIHGLCNQKLVEDV 357
+ ++Y ++ G C L+ED
Sbjct: 290 NSITYNLMLKGFCKVGLLEDA 310
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 37/273 (13%)
Query: 134 IKIYGNMA-GRISKAIETLFD--MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
++++G+ A G + + L D + NC P + T++ +LN L A + E + ++
Sbjct: 492 MRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMM 551
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
++ D+ NI + C+ G + +AF VL + K+ C ++ TY++L+ GL K +
Sbjct: 552 GEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIF 611
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY---- 306
E GL++ M +GI + T+N I L + GKVE+ LL+ M K PN S+
Sbjct: 612 EIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Query: 307 ------------QEV-------------LYG-----LLDKKRFPEAKELVGRMICERMSP 336
QEV LY LL + +A EL+ ++
Sbjct: 672 GAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
YK L+ LC + +E +L KM+ +G+
Sbjct: 732 GTFLYKDLVVSLCKKDELEVASGILHKMIDKGY 764
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 138/307 (44%), Gaps = 22/307 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC--------RFS----DGFFYNVIKI 136
PN+ +Y I++ + R D E ++++++ E L R S +G + +I
Sbjct: 215 PNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ +M ++ +P P+ T+NL+L L + + ++ S + +
Sbjct: 275 FSDME------LDEYLGLPR----PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLV 324
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
NI L+GL +G A VL + + P++ +Y+ LM GLC+ G + +A ++
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M+ G+ D VT+ L+ G GKV+ LL+ M C PN+ + +L+ L +
Sbjct: 385 GLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNM 444
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
R EA+EL+ +M + V+ ++ GLC ++ ++K M G +
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 377 REIVGCV 383
+G V
Sbjct: 505 NSYIGLV 511
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 136/288 (47%), Gaps = 15/288 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ ++N L +A RF + + + EKL D YN+ + G+IS A
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKL--QPDSLAYNIFIHHFCKQGKISSAF 579
Query: 149 ETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L DM C S++T+N L+L L + +++ EI G+ + G+ + C N ++
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIF-EIHGLMDEMREKGISPNICTYNTAIQY 638
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES-----E 262
LCE G +E A +LDE ++N PNV ++ L+ C+ + + A + E S E
Sbjct: 639 LCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKE 698
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ ++++ + L G++ + +LLE + +G + Y++++ L K A
Sbjct: 699 GL------YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVA 752
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
++ +MI + + +I GL ++ + +KM++ V
Sbjct: 753 SGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASV 800
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 37/325 (11%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L D +++ ++ KR +P+ Y +++ + DA + ++Q + + C +
Sbjct: 377 LSDAKTIVGLM----KRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEM-MRNNC-LPN 430
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA----KLYGEIQ 183
+ N++ GRIS+A E L M T N++++ L + K ++
Sbjct: 431 AYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 184 G--IYTSAA--KLGVE---------IDACCL------NILLKGLCENGNLEAAFYVLDEF 224
G ++ SAA LG I+ CL + LL GLC+ G A + E
Sbjct: 491 GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEM 550
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ +P+ Y+ +H C++G + AF +L+ ME +G T+N LI GL + ++
Sbjct: 551 MGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
E L++ M+ KG PN +Y + L + + +A L+ M+ + ++P+ S+K L
Sbjct: 611 FEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYL 670
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGF 369
I C V D D M Q+ F
Sbjct: 671 IGAFCK---VPDFD-----MAQEVF 687
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+LL+ +E ++ + P T++ L+ LC+ V+ A L + M
Sbjct: 116 NVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPE 175
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G + TF IL+ G K G ++G++LL M+ G PN Y ++ + R +
Sbjct: 176 KGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDD 235
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+++LV +M E + P V++ I LC + V D + M
Sbjct: 236 SEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL---CENGNLEAAF----YVLDEF 224
+LV AK++ EI+ ++ L I L+ LL + ++ +++ AF +V F
Sbjct: 48 ILVRAKMHEEIEELHNLI--LSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQFVRSRF 105
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
P+ +P + Y+ L+ + VE L + M GI +T TFN+LI L V
Sbjct: 106 PEN--KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCV 163
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ +L + M KGC PN ++ ++ G + EL+ M + P+ V Y +
Sbjct: 164 DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTI 223
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ C + +D + +++KM ++G VP
Sbjct: 224 VSSFCREGRNDDSEKLVEKMREEGLVP 250
>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12300, mitochondrial-like [Glycine max]
Length = 450
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 154/334 (46%), Gaps = 40/334 (11%)
Query: 76 SVLNQYSKRKDYNPNEALYTLII---------NK--------LAQAKRFDAIEDIMQRIK 118
SVL + KR Y P+ +T +I NK LAQ +FD +
Sbjct: 126 SVLAKILKR-GYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVS---YGTL 181
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+ +C+ D IK+ + GR++K P+V+ +N +++ L +L
Sbjct: 182 INGVCKIGDT--RGAIKLVRKIDGRLTK--------------PNVEMYNTIIDALCKYQL 225
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
E G+++ G+ + NI++KG C++ ++ A + E ++N P + TY +
Sbjct: 226 VSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGS 285
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
LM GLC+ G + + L++ M GI AD +T+N LI GL K G ++ + L +MK
Sbjct: 286 LMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXR 345
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
+ ++ +L GL R +A+E+ ++ + Y +I+G C Q L+E+
Sbjct: 346 F--DRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEAL 403
Query: 359 WVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
+ KM G +P + EI+ F KD ++
Sbjct: 404 TMRSKMEDNGCIPS-AVTFEIIINALFEKDENDK 436
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 5/260 (1%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ M P V FN +L+ K Y + G++ D LNI
Sbjct: 51 VDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNI 110
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C G + F VL + K+ +P+ T++TL+ GLC KG V +A +++ ++G
Sbjct: 111 LMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 170
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D V++ LI+G+ K G +KL+ ++ G+ PN Y ++ L + EA
Sbjct: 171 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 230
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
L M + +S + VSY +I G C K+V++ + K+M Q+ VP + + G +
Sbjct: 231 GLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTY----GSL 286
Query: 384 TFGKDNRNRV-YVTETVDSL 402
G R+ YV E +D +
Sbjct: 287 MDGLCKSGRISYVWELIDEM 306
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 122/242 (50%), Gaps = 4/242 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +Y II+ L + + + + + + ++ YN++ + + +A+
Sbjct: 208 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGIS--ANVVSYNIMIKGFCKSKMVDEAL 265
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M N P++ T+ +++ L + + + G+ D N L+ GL
Sbjct: 266 NLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGL 325
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+NG+L+ A + ++ ++ + T++ L+ GLC+ G +++A + + + ++ D D
Sbjct: 326 CKNGHLDRAIALFNKM--KDXRFDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDV 383
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+N++I+G KQG +EE + + +M+ GC P++ +++ ++ L +K +A++L+
Sbjct: 384 YPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHE 443
Query: 329 MI 330
MI
Sbjct: 444 MI 445
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 16/220 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM---- 140
K + N Y ++I ++K D ++ + + + + I YG++
Sbjct: 239 KGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVP--------TIVTYGSLMDGL 290
Query: 141 --AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
+GRIS E + +M V T+N +++ L ++ D
Sbjct: 291 CKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKD--XRFDR 348
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
ILL GLC+ G L+ A V + + + +V Y+ +++G C++G +EEA + +
Sbjct: 349 LTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSK 408
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
ME G VTF I+I+ L ++ + ++ KLL M +G
Sbjct: 409 MEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEMIARG 448
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
TF ++L+ L + Q ++ ++D N+++ G C+ G LE A + +
Sbjct: 350 TFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKM 409
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
C P+ T+ +++ L EK ++A LL M + G+
Sbjct: 410 EDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEMIARGL 449
>gi|255548041|ref|XP_002515077.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545557|gb|EEF47061.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 262
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 102/176 (57%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++ LC G L A+ + ++ K++ P++ +Y LM GLC + V A GLLE M ++G
Sbjct: 1 MRALCLTGELSVAYKLFNQMFKRDVLPDIESYRILMQGLCRRSQVNGAVGLLEDMLNKGF 60
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+ L++ L ++ K+ E KLL RMK KGC P+ Y ++ G + R +A++
Sbjct: 61 VPDCLTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTIISGFCREGRAMDARK 120
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++G M C P+ VSY+ L+ G+C+Q + ++ L++M+ +GF P + +V
Sbjct: 121 VLGDMECNGCLPNLVSYRTLVAGICDQGMFDEAKSYLEEMILKGFSPHFSVSHALV 176
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%)
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL++GLC + A +L++ + P+ TY+TL++ LC K + EA+ LL RM+ +
Sbjct: 34 ILMQGLCRRSQVNGAVGLLEDMLNKGFVPDCLTYTTLLNSLCRKKKLREAYKLLCRMKVK 93
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + D V +N +ISG ++G+ + K+L M+ GC PN SY+ ++ G+ D+ F EA
Sbjct: 94 GCNPDIVHYNTIISGFCREGRAMDARKVLGDMECNGCLPNLVSYRTLVAGICDQGMFDEA 153
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
K + MI + SP F L+ G C +E+ V++ +++ G VP W
Sbjct: 154 KSYLEEMILKGFSPHFSVSHALVKGFCIVGKIEEACGVVEVLLKHGEVPHADTW 207
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 102/238 (42%), Gaps = 3/238 (1%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ G +S A + M + P ++++ +++ L G+ G D
Sbjct: 6 LTGELSVAYKLFNQMFKRDVLPDIESYRILMQGLCRRSQVNGAVGLLEDMLNKGFVPDCL 65
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
LL LC L A+ +L + C P++ Y+T++ G C +G +A +L M
Sbjct: 66 TYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTIISGFCREGRAMDARKVLGDM 125
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E G + V++ L++G+ QG +E LE M KG P+ + ++ G +
Sbjct: 126 ECNGCLPNLVSYRTLVAGICDQGMFDEAKSYLEEMILKGFSPHFSVSHALVKGFCIVGKI 185
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
EA +V ++ P ++ ++ +C V+D++ + + + + V MG R
Sbjct: 186 EEACGVVEVLLKHGEVPHADTWIIILPRICE---VDDLEGIRQSLDKAMMVEIMGDTR 240
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P+ YT ++N L + K+ ++ R+KV K C D YN I GR
Sbjct: 58 KGFVPDCLTYTTLLNSLCRKKKLREAYKLLCRMKV-KGCN-PDIVHYNTIISGFCREGRA 115
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + L DM C P++ ++ ++ + ++ E + G + L
Sbjct: 116 MDARKVLGDMECNGCLPNLVSYRTLVAGICDQGMFDEAKSYLEEMILKGFSPHFSVSHAL 175
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+KG C G +E A V++ K P+ T+ ++ +CE ++E
Sbjct: 176 VKGFCIVGKIEEACGVVEVLLKHGEVPHADTWIIILPRICEVDDLE 221
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 1/262 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+GR T DM C P+ T+ +L L A+ + E + ++ A G +
Sbjct: 30 SGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFS 89
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+IL+ GLC ++ A +L+E +PNV TY +L+ GLC+ G ++EA L RM
Sbjct: 90 YSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMV 149
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G D V +N+LI G K+G + E +L E M KGC P +Y +L G K F
Sbjct: 150 YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFG 209
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ L M+ + P+ ++ L+ G C + + + +M G P + + ++
Sbjct: 210 RVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLM 269
Query: 381 -GCVTFGKDNRNRVYVTETVDS 401
G + GK + + + E + S
Sbjct: 270 RGMCSKGKPHEAQRLLREMIRS 291
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 142/329 (43%), Gaps = 37/329 (11%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ PN Y +++ L + + D+ R+ V + C DG YNV+ + G + +
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM-VYRGCP-PDGVVYNVLIDGFSKKGDMGE 175
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A +M C P+V T+N +L+ +G +Q ++ + G + N LL
Sbjct: 176 AYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLD 235
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+ G++ A + E C P+V +Y+TLM G+C KG EA LL M G+
Sbjct: 236 GFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGP 295
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL---------------- 310
D V++NILI G K G ++ +KL + G P++ SY ++
Sbjct: 296 DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF 355
Query: 311 -------------------YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
GL +R E+ EL M+ P Y L++ LC
Sbjct: 356 KDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKA 415
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
K +DV + ++ ++GF P + + + I+
Sbjct: 416 KRSDDVCEIFHELTERGFSPDVEISKVIL 444
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 4/296 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-RISKA 147
PN Y ++ L QA+RF+ + + + + S F I I G G ++ +A
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGC---SPNVFSYSILIAGLCRGQKVDEA 106
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L +M P+V T+ +L+ L E +++ G D N+L+ G
Sbjct: 107 AELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDG 166
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ G++ A+ + +E ++ C P V TY++L+ G KG L + M +G +
Sbjct: 167 FSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TFN L+ G K G + E +L M+ GC P+ SY ++ G+ K + EA+ L+
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLR 286
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
MI + P VSY LI G ++ + ++ + G P + I+ C+
Sbjct: 287 EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 97/209 (46%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
++N +L +L + + G Y G + LL+ LC+ E A V
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
Q C PNV +YS L+ GLC V+EA LL M G + VT+ L+SGL K GK+
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+E + L RM +GC P+ Y ++ G K EA L M+ + P+ +Y L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ G + V + K M++QG VP +
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNI 227
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+++N L+ L K G+ + M G GC PN+ +Y +L L +RF EA+ +
Sbjct: 17 TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
M + SP+ SY LI GLC + V++ +L +M+ G P + + ++ G G
Sbjct: 77 GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136
Query: 387 K 387
K
Sbjct: 137 K 137
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 64/155 (41%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN++ + +G + AI+ +++P P +++ +++ L A G ++
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G DA + L+ GLC L + + K C P + Y+ LM+ LC+ +
Sbjct: 360 ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSD 419
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
+ + + G D +++ LR+ E
Sbjct: 420 DVCEIFHELTERGFSPDVEISKVILETLRRSDDKE 454
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 114/230 (49%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +AI+ M P++ T+N ++N K+ E ++ +K + +
Sbjct: 322 GKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITF 381
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ C+ G +E F + + PNV TY+ L+ GLC K +++ A LL ME+
Sbjct: 382 NTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMEN 441
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G+ D VT+NILI GL K K KLL M G PN +Y ++ G + +
Sbjct: 442 KGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKA 501
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A + RM ER P+ V+Y LI G C +E + +L +M+++G P
Sbjct: 502 ALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNP 551
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 138/282 (48%), Gaps = 7/282 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG----NMAGRISKAIE 149
+ + IN L +A + + ED ++ +K + + YN + + G AG++ KA
Sbjct: 203 FNIFINGLCRAGKLNKAEDAIEDMKAWGIS--PNVVTYNTL-VDGYCKRGSAGKMYKAEA 259
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+ +M + P+ TFN +++ + + + K G++ + N L+ GLC
Sbjct: 260 FMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLC 319
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
NG LE A + D+ +PN+ TY+ L++G C+K ++EA + + + + + + +
Sbjct: 320 NNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVI 379
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
TFN +I K+G +EEG L M +G PN ++Y ++ GL K+ AKEL+ M
Sbjct: 380 TFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEM 439
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + V+Y LI GLC + + +L +M G P
Sbjct: 440 ENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKP 481
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 115/237 (48%), Gaps = 3/237 (1%)
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A E Y S+ + N +L+ LV G+++ +Y K + + NI +
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 208
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF---GLLERMESEG 263
GLC G L A +++ PNV TY+TL+ G C++G+ + + ++ M +
Sbjct: 209 GLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I + VTFN LI G K V K E M+ +G PN +Y ++ GL + + EA
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+L +M+ + P+ V+Y LI+G C +K++++ V + +Q VP + + ++
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMI 385
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 5/231 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
++ TFN+ +N L A + + G+ + N L+ G C+ G+ Y
Sbjct: 199 NLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGS-AGKMYKA 257
Query: 222 DEFPKQNCE----PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+ F K+ PN T++TL+ G C+ NV A E M+ +G+ + VT+N LI+G
Sbjct: 258 EAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLING 317
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L GK+EE + L ++M G G PN +Y ++ G KK EA ++ + + + P+
Sbjct: 318 LCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPN 377
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
+++ +I C + ++E+ + M+ +G +P + + ++ + +D
Sbjct: 378 VITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQD 428
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 2/233 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +IN + K + + ++L + +N + G + +
Sbjct: 341 PNIVTYNALINGFCKKKMMKEATKVFDDVSKQEL--VPNVITFNTMIDAYCKEGMMEEGF 398
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M P+V T+N ++ L + + + G++ D NIL+ GL
Sbjct: 399 SLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGL 458
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+N A +L+E +PN TY+TLM G C +G ++ A + RME E +
Sbjct: 459 CKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNV 518
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
VT+N+LI G K K+E LL M KG PN +Y V +L+K P+
Sbjct: 519 VTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPD 571
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 131/290 (45%), Gaps = 20/290 (6%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+++ PN Y +IN L + + D+ K+ L + YN + I G
Sbjct: 300 QKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWD--KMVGLGLKPNIVTYNAL-INGFCKK 356
Query: 143 RISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
++ K +FD + P+V TFN +++ + E + +S G+ +
Sbjct: 357 KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTY 416
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC +L+AA +L+E + + +V TY+ L+ GLC+ A LL M +
Sbjct: 417 NCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN 476
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ + VT+N L+ G +GK++ + + RM+ + PN +Y ++ G +
Sbjct: 477 LGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEA 536
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A L+ M+ + ++P+ +Y D V +M+++GF P
Sbjct: 537 ANGLLNEMLEKGLNPNRTTY----------------DIVRLEMLEKGFSP 570
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 85/186 (45%), Gaps = 3/186 (1%)
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A +++L+ +N L A+ + ++ + + L+ L ++ + + + +
Sbjct: 130 ALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYK 189
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK- 316
M I + TFNI I+GL + GK+ + +E MK G PN +Y ++ G +
Sbjct: 190 EMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRG 249
Query: 317 --KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ +A+ + M+ ++ P+ V++ LI G C + V ++M +QG P +
Sbjct: 250 SAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIV 309
Query: 375 MWREIV 380
+ ++
Sbjct: 310 TYNSLI 315
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 130/254 (51%), Gaps = 2/254 (0%)
Query: 129 FFYNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+ YNVI I G ++ G + K + + M P+V T+N +++ K E +
Sbjct: 208 YTYNVI-IRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLR 266
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ A GV + N ++ GLC G + +++E + P+ TY+TL++G C++G
Sbjct: 267 AMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEG 326
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
N+ + LL M +G+ + VT+ LI+ + K G + +++ ++M+ +G PN +Y
Sbjct: 327 NLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYT 386
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G K EA +++ MI SPS V+Y L+HG C V++ +L+ MV++
Sbjct: 387 TLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVER 446
Query: 368 GFVPRMGMWREIVG 381
G P + + ++
Sbjct: 447 GLPPDVVSYSTVIA 460
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 130/252 (51%), Gaps = 5/252 (1%)
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-----SAKLY 179
FS ++++ + G + KA+ L + P+V ++N VL+ L+ + + Y
Sbjct: 129 FSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDY 188
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ + ++ + GV + N++++G+ G+LE + + K+ PNV TY+TL
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL 248
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ C+K V+EA LL M G+ A+ +++N +I+GL +G++ E +L+E M+GKG
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL 308
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P+ +Y ++ G + + L+ M+ + +SP+ V+Y LI+ +C +
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368
Query: 360 VLKKMVQQGFVP 371
+ +M +G P
Sbjct: 369 IFDQMRVRGLRP 380
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 2/278 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y +IN L R + ++++ ++ + L D YN + G + + + L +
Sbjct: 280 YNSVINGLCGKGRMSEVGELVEEMRGKGLV--PDEVTYNTLVNGFCKEGNLHQGLVLLSE 337
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P+V T+ ++N + A I+ G+ + L+ G C+ G
Sbjct: 338 MVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGL 397
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A+ VL E P+V TY+ L+HG C G V+EA G+L M G+ D V+++
Sbjct: 398 MNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYST 457
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I+G ++ ++ + ++ E M KG P++ +Y ++ GL +++ EA +L M+
Sbjct: 458 VIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRG 517
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P V+Y LI+ C + + +MVQ+GF+P
Sbjct: 518 LPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLP 555
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 140/290 (48%), Gaps = 4/290 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+++ +PN Y +I+ + K+ +++ + V + ++ YN + G
Sbjct: 234 EKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVA--ANLISYNSVINGLCGKG 291
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+S+ E + +M P T+N ++N + + + G+ +
Sbjct: 292 RMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYT 351
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ +C+ GNL A + D+ + PN RTY+TL+ G C+KG + EA+ +L M
Sbjct: 352 TLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVS 411
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G VT+N L+ G G+V+E + +L M +G P+ SY V+ G ++ +A
Sbjct: 412 GFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKA 471
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVDWVLKKMVQQGFVP 371
++ M+ + + P V+Y LI GLC QKLVE D + ++M+++G P
Sbjct: 472 FQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFD-LFREMMRRGLPP 520
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 17/311 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +PN YT +IN + +A +I +++V L R ++ + +I + G +
Sbjct: 341 KGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGL-RPNERTYTTLIDGFCQ-KGLM 398
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
++A + L +M PSV T+N +++ E GI + G+ D + +
Sbjct: 399 NEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTV 458
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C L AF + +E ++ P+ TYS+L+ GLC + + EAF L M G+
Sbjct: 459 IAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGL 518
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VT+ LI+ G++ + ++L + M +G P++ +Y ++ GL K R AK
Sbjct: 519 PPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKR 578
Query: 325 LVGRMICERMSPSFVSYKKLIH---------------GLCNQKLVEDVDWVLKKMVQQGF 369
L+ ++ E P V+Y LI G C + L+ + D V K M+Q+
Sbjct: 579 LLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNH 638
Query: 370 VPRMGMWREIV 380
P ++ ++
Sbjct: 639 KPNAAIYNLMI 649
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 86/164 (52%)
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
V + + PNV TY+ ++ G+ +G++E+ G + +ME EGI + VT+N LI
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+ KV+E M LL M G N SY V+ GL K R E ELV M + + P V
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+Y L++G C + + +L +MV +G P + + ++ C+
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCM 357
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 35/233 (15%)
Query: 84 RKDYNPNEALYTLIIN------KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
R+ P+E YT +IN +L++A R ++++QR D Y+V+
Sbjct: 515 RRGLPPDEVTYTSLINAYCVDGELSKALRLH--DEMVQR------GFLPDNVTYSVLING 566
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
N R A L + P T+N ++ S + ++G
Sbjct: 567 LNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIEN-CSNNEFKSVEG------------- 612
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
L+KG C G + A V ++N +PN Y+ ++HG GNV +A+ L
Sbjct: 613 ------LVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYM 666
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+E TV L+ L ++G +E +LL+ + + C N A +VL
Sbjct: 667 ELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNIL-RSCRLNDAKVAKVL 718
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 160/339 (47%), Gaps = 34/339 (10%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYN------------------PNEALYTLIINK 100
T +L ++RD +S +VL +R ++ PN YT+++
Sbjct: 65 TSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRA 124
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AGRISKAIETLFDM 154
L + D +++ ++ S G +V+ YG + A + KA+E + +M
Sbjct: 125 LCADRLADQAVGLLRSMR-------SAGVRADVVT-YGTLIRGLCDAAEVDKAVELMGEM 176
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
P+V ++ +L + + ++ ++ ++ G+E D L+ LC+ G
Sbjct: 177 CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A V+D ++ EPNV TY+ L++ +C++G+V+EA G+L++M +G+ D VT+N L
Sbjct: 237 KKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296
Query: 275 ISGLRKQGKVEEGMKLLERM-KGKGCY-PNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
I GL +++E M LLE M +GK PN ++ V+ GL D R +A ++ M
Sbjct: 297 IKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEET 356
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ V+Y LI GL V ++ +M G P
Sbjct: 357 GCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEP 395
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDI---MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PN +Y+ ++ ++ R++ + + M +E G ++ K+ G+
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV-----GKAK 237
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KA + M P+V T+N+++N + E G+ ++ GV D N L+
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297
Query: 206 KGLCENGNLEAAFYVLDEF--PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
KGL + ++ A ++L+E K +PNV T+++++ GLC+ G + +AF + ME G
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+N+LI GL + KV + M+L++ M G P+S +Y ++ G + A+
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAE 417
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+L+ M + P Y L+ +C Q ++E
Sbjct: 418 DLLSTMRDRGIEPELFHYIPLLVAMCEQGMME 449
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 11/292 (3%)
Query: 85 KDYNPNEALYTLIIN---KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K P+ +YT +I+ K+ +AK+ + D+M R +E + YNV+
Sbjct: 214 KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP-----NVVTYNVLINCMCKE 268
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA--AKLGVEIDAC 199
G + +AI L M P V T+N ++ L E + K V+ +
Sbjct: 269 GSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVV 328
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N +++GLC+ G + AF V + C N+ TY+ L+ GL V +A L++ M
Sbjct: 329 TFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM 388
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S G++ D+ T++ILI G K +V+ LL M+ +G P Y +L + ++
Sbjct: 389 TSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMM 448
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A+ L M V+Y +IHG C ++ +LK +V +G P
Sbjct: 449 ERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTP 499
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 3/190 (1%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEF---PKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
DA N +L LC G+ + A +L P C PN +Y+ LM LC ++A
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
GLL M S G+ AD VT+ LI GL +V++ ++L+ M G PN Y +L G
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
R+ + ++ M + + P V Y LI LC + V+ MV++G P +
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255
Query: 374 GMWREIVGCV 383
+ ++ C+
Sbjct: 256 VTYNVLINCM 265
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 133/296 (44%), Gaps = 37/296 (12%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRFSDGFFYNV 133
I VL + S+ K P+ Y +I L+ D A+ + + ++ + + + + F +V
Sbjct: 275 IGVLKKMSE-KGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSV 333
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
I+ ++ GR+ +A + M C ++ T+NL++ L+ + + LG
Sbjct: 334 IQGLCDI-GRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP---------------------- 231
+E D+ +IL+KG C+ ++ A +L + EP
Sbjct: 393 LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERAR 452
Query: 232 ------------NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+V YST++HG C+ G+++ A LL+ + EG+ D VT++I+I+
Sbjct: 453 NLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFA 512
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
K G +E +L++M G P+ A + ++ G K + EL+ MI + ++
Sbjct: 513 KSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIA 568
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 89/206 (43%), Gaps = 6/206 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++I + + D ED++ ++ + + F Y + + G + +A
Sbjct: 395 PDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI--EPELFHYIPLLVAMCEQGMMERA- 451
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
LF+ N V ++ +++ A + + S G+ DA +I++
Sbjct: 452 RNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMF 511
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
++G++EAA VL + P+V + +L+ G KG + + L+ M ++ I D+
Sbjct: 512 AKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDS 571
Query: 269 VTFNILISGLRKQGKVEEGMKLLERM 294
+ L + L EG LL+ +
Sbjct: 572 KIISTLSTSLVAS---NEGKALLQSL 594
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 150/318 (47%), Gaps = 33/318 (10%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
+ ++I KLA + D+++ ++Q++K++ S+ F +VI +Y G +A+E +
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGF-HCSEDLFISVISVY-RQVGLAERAVEMFYR 136
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+ + C PSVK +N VL+ L+ I +Y + G E + N+LLK LC+N
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE---------------------- 251
++ A +L E + C P+ +Y+T++ +CE G V+E
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256
Query: 252 --------AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
AF L+ M +GI + ++++ LI+ L G++E L +M +GC+PN
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMI-CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+ ++ G + +A +L +MI + P+ V+Y L+ G C+ + V
Sbjct: 317 YTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376
Query: 363 KMVQQGFVPRMGMWREIV 380
M + G P + + ++
Sbjct: 377 HMEEIGCSPNIRTYGSLI 394
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 9/258 (3%)
Query: 134 IKIYGNMA------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
I+ YG++ G + A+ M + C P+V + ++ L + E + +
Sbjct: 387 IRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE 446
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEK 246
+K N +KGLC+ G L+ A V + +Q+ C PN+ TY+ L+ GL +
Sbjct: 447 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKA 506
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+EEA+GL + G++ + T+N L+ G G ++L+ +M G P+ +
Sbjct: 507 NRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICER--MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ + + A +++ + C R P +SY +I GLC ED +L++M
Sbjct: 567 NMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERM 626
Query: 365 VQQGFVPRMGMWREIVGC 382
+ G VP + W ++ C
Sbjct: 627 ISAGIVPSIATWSVLINC 644
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 144/352 (40%), Gaps = 49/352 (13%)
Query: 62 LKIFSNLRDP------ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+KI++++ D I +I ++ + KR + PN Y +++ L + + D + ++
Sbjct: 146 VKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLV 205
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
+ + C D Y + G + + E + P V +N ++N L
Sbjct: 206 EMSNKGCC--PDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNALINGLCK 258
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
Y + + G+ + + L+ LC +G +E AF L + K+ C PN+ T
Sbjct: 259 EHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYT 318
Query: 236 ------------------------------------YSTLMHGLCEKGNVEEAFGLLERM 259
Y+TL+ G C GN+ +A + M
Sbjct: 319 LSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM 378
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E G + T+ LI+G K+G ++ + + +M GC PN Y ++ L +F
Sbjct: 379 EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF 438
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA+ L+ M E +PS ++ I GLC+ ++ + V ++M QQ P
Sbjct: 439 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%)
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T+ ++ L G V+ LL++M+ +G F +IS R+ G E +++ R+
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
K GC P+ Y VL LL + R + M + P+ +Y L+ LC V
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 355 EDVDWVLKKMVQQGFVP 371
+ +L +M +G P
Sbjct: 198 DGAKKLLVEMSNKGCCP 214
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 28/312 (8%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRF----DAIEDIMQRIKVEKLCRFS---DGF 129
+L + +RK NP+ ++ +IN + +F + ++++ R + +S DGF
Sbjct: 310 LLQEMLERK-INPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGF 368
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
R+ A + P+ C P + TFN ++ AK + +
Sbjct: 369 CKQ---------NRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 419
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ G+ + L+ G C+ G+L AA +L E PNV T +TL+ GLC+ G +
Sbjct: 420 TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKL 479
Query: 250 EEAFGLLERMESE-----------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++A + + M+ G++ D T+NILI GL +GK E +L E M +G
Sbjct: 480 KDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRG 539
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
P++ +Y ++ GL + R EA ++ M + SP V++ LI G C +V+D
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGL 599
Query: 359 WVLKKMVQQGFV 370
+ +M Q+G V
Sbjct: 600 ELFCEMGQRGIV 611
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 150/335 (44%), Gaps = 18/335 (5%)
Query: 53 KDWLSPTEV-----LKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
+D L P ++ + + D +S +++L + + PN +Y II+ L + R
Sbjct: 210 EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRH 269
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
++ ++ +++ F D YN + ++GR S A + L +M P V TF+
Sbjct: 270 SDAHNLFIEMQEKEI--FPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFS 327
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
++N V + E + +Y + + ++ G C+ L+AA ++ P +
Sbjct: 328 ALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTK 387
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
C P++ T++TL+ G C V++ LL M G+ A+T+T+ LI G + G +
Sbjct: 388 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 447
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS-----------P 336
LL+ M G PN + +L GL D + +A E+ M +M P
Sbjct: 448 QDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEP 507
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y LI GL N+ + + + ++M +G VP
Sbjct: 508 DVQTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 5/217 (2%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
+F +++ S + KLG N LL GLC + A LD F
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEA---LDLF 174
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
Q C+PNV T++TLM+GLC +G V EA LL+RM +G+ + +T+ ++ G+ K G
Sbjct: 175 -HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233
Query: 285 EEGMKLLERMKG-KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKK 343
+ LL +M+ PN Y ++ GL R +A L M + + P V+Y
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293
Query: 344 LIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+I+G C D + +L++M+++ P + + ++
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALI 330
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC-------RFSDGFFYNVIKIYGNMAG 142
N YT +I+ Q +A +D++Q + +C DG N G
Sbjct: 427 NTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDN---------G 477
Query: 143 RISKAIETLFDM-----------PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
++ A+E M P P V+T+N+++ L++ + E + +Y
Sbjct: 478 KLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPH 537
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ D + ++ GLC+ L+ A + D ++ P+V T++TL+ G C+ G V++
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDD 597
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
L M GI AD +T+ LI G RK ++ + + + M G YP++ + + +L
Sbjct: 598 GLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLT 657
Query: 312 GLLDKKRFPEA 322
GL K+ A
Sbjct: 658 GLWSKEELERA 668
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 137/286 (47%), Gaps = 15/286 (5%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NM 140
+ K +P+ + +I +AKR D ++ + L ++ Y + I+G
Sbjct: 384 TPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGL--VANTITYTTL-IHGFCQ 440
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-------SAKLYGEIQ----GIYTSA 189
G ++ A + L +M S P+V T N +L+ L + +++ +Q I S
Sbjct: 441 VGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASR 500
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
GVE D NIL+ GL G A + +E P + P+ TYS+++ GLC++ +
Sbjct: 501 PFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+EA + + M S+ D VTFN LI+G K G V++G++L M +G ++ +Y +
Sbjct: 561 DEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITL 620
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+YG A ++ MI + P ++ + ++ GL +++ +E
Sbjct: 621 IYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELE 666
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 127/297 (42%), Gaps = 19/297 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ +I+ + R DA E M + K C F +I Y A R+ I
Sbjct: 356 PSTVTYSSMIDGFCKQNRLDAAEH-MFYLTPTKGCSPDIITFNTLIAGYCR-AKRVDDGI 413
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M + T+ +++ Q + GV + N LL GL
Sbjct: 414 KLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGL 473
Query: 209 CENGNLEAAFYVLDEF-----------PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
C+NG L+ A + P EP+V+TY+ L+ GL +G EA L E
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYE 533
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M GI DT+T++ +I GL KQ +++E ++ + M K P+ ++ ++ G
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAG 593
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL---KKMVQQGFVP 371
+ EL M + ++Y LI+G + V+++D L ++M+ G P
Sbjct: 594 MVDDGLELFCEMGQRGIVADAITYITLIYGF---RKVDNIDGALDIFQEMISSGVYP 647
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 116/240 (48%), Gaps = 5/240 (2%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RIS+A++ M C P+V TF ++N L E + + G++ +
Sbjct: 166 RISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYG 221
Query: 203 ILLKGLCENGNLEAAFYVLDEFPK-QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++ G+C+ G+ +A +L + + + PNV Y+T++ GL + G +A L M+
Sbjct: 222 TIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQE 281
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ I D VT+N +I+G G+ + +LL+ M + P+ ++ ++ + + +F E
Sbjct: 282 KEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFE 341
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A+EL M+ + PS V+Y +I G C Q ++ + + +G P + + ++
Sbjct: 342 AEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIA 401
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 125/292 (42%), Gaps = 15/292 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------G 142
PN +T ++N L + R ++ R+ DG N I YG + G
Sbjct: 180 PNVVTFTTLMNGLCREGRVVEAVALLDRM-------LEDGLQPNQIT-YGTIVDGMCKMG 231
Query: 143 RISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
A+ L M + P+V +N +++ L + + ++ + + D
Sbjct: 232 DTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTY 291
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ G C +G A +L E ++ P+V T+S L++ ++G EA L + M
Sbjct: 292 NCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLP 351
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
I TVT++ +I G KQ +++ + KGC P+ ++ ++ G KR +
Sbjct: 352 RSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDD 411
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+L+ M + + ++Y LIHG C + +L++M+ G P +
Sbjct: 412 GIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNV 463
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 9/214 (4%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PSV F ++ ++V + ++ L + +A IL+K C L A
Sbjct: 79 PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ K P V T++TL+HGLC + + EA L +M + VTF L++GL +
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCR 194
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS---PS 337
+G+V E + LL+RM G PN +Y ++ G+ A L+ +M E +S P+
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM--EEVSHIIPN 252
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
V Y +I GL D + +M ++ P
Sbjct: 253 VVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFP 286
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 72/154 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+ +A E +MP P T++ +++ L E ++ S D
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTF 582
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C+ G ++ + E ++ + TY TL++G + N++ A + + M S
Sbjct: 583 NTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMIS 642
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
G+ DT+T +++GL + ++E + +LE ++
Sbjct: 643 SGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 4/177 (2%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G E L+ A + + P+V + LM + G + L ++ME
Sbjct: 52 LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + +F IL+ K+ + ++ G +P ++ +L+GL + R EA
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+L +M C+ P+ V++ L++GLC + V + +L +M++ G P + IV
Sbjct: 172 DLFHQM-CK---PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIV 224
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 156/336 (46%), Gaps = 24/336 (7%)
Query: 54 DWLSPTEVLKIFSNLRD---PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
D + T+++K F N R+ V+ +L +Y K P+ Y +I+ +A + +
Sbjct: 103 DVILCTKLIKGFFNSRNIGKATRVMEILERYGK-----PDVFAYNALISGFIKANQLENA 157
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
++ R+K D YN++ G++ A+E ++ NC P+V T+ +++
Sbjct: 158 NRVLDRMKSRGF--LPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILI 215
Query: 171 NLLVSAKLYGEIQGIYTSAAKL-------GVEIDACCLNILLKGLCENGNLEAAFYVLDE 223
+ + G A KL G+E D N +++G+C+ ++ AF +L
Sbjct: 216 EATI-------LDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRS 268
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283
+ C+P++ TY+ L+ L +G E L+ M S G + VT +ILI L + GK
Sbjct: 269 LSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGK 328
Query: 284 VEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKK 343
VEE + LL MK KG P++ Y ++ G + R A E + MI + P V+Y
Sbjct: 329 VEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNT 388
Query: 344 LIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
++ GLC + V +K+ + G P + + +
Sbjct: 389 IMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTL 424
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 138/287 (48%), Gaps = 6/287 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF--SDGFFYNVIKIYGNMAGRISK 146
P YT++I +A D D+ ++ E L + D YN I + K
Sbjct: 206 PTVITYTILI----EATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDK 261
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A E L + S C P + T+N++L L+S + E + + + +G + + +IL+
Sbjct: 262 AFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIG 321
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC +G +E A +L ++ +P+ Y L+ G C +G ++ A LE M S+G
Sbjct: 322 TLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLP 381
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D V +N +++GL + GK ++ +++ E++ GC PN +SY + L A E++
Sbjct: 382 DIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMI 441
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+++ + + P ++Y LI LC +V++ +L M + P +
Sbjct: 442 LKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNV 488
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 138/314 (43%), Gaps = 9/314 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS--DGFFYNVIKIYGNMAG 142
K Y P+ L T +I ++ +M E L R+ D F YN + A
Sbjct: 98 KGYTPDVILCTKLIKGFFNSRNIGKATRVM-----EILERYGKPDVFAYNALISGFIKAN 152
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ A L M S P V T+N+++ S I+ K E
Sbjct: 153 QLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYT 212
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL++ +G ++ A +LDE + EP+ TY+ ++ G+C++ V++AF LL + S
Sbjct: 213 ILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSR 272
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D +T+NIL+ L +GK EG KL+ M GC PN ++ ++ L + EA
Sbjct: 273 GCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEA 332
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG- 381
L+ M + + P Y LI G C + ++ L+ M+ G +P + + I+
Sbjct: 333 VNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAG 392
Query: 382 -CVTFGKDNRNRVY 394
C T D V+
Sbjct: 393 LCRTGKADQALEVF 406
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 132/287 (45%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+ Y II + + D ++++ + + C+ D YN++ G+
Sbjct: 237 KGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLS-SRGCK-PDIITYNILLRTLLSRGKW 294
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S+ + + +M S C P+V T ++++ L E + S + G++ DA C + L
Sbjct: 295 SEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPL 354
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C G L+ A L+ C P++ Y+T+M GLC G ++A + E+++ G
Sbjct: 355 IAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGC 414
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ ++N L S L G ++++ ++ +G P+ +Y ++ L EA E
Sbjct: 415 PPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIE 474
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ M R P+ VSY ++ GLC D VL M ++G P
Sbjct: 475 LLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQP 521
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 113/241 (46%), Gaps = 2/241 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN ++++I L + + + ++++ +K + L D + Y+ + GR+ A
Sbjct: 311 PNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGL--KPDAYCYDPLIAGFCREGRLDLAT 368
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M S C P + +N ++ L + ++ ++G + N L L
Sbjct: 369 EFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSAL 428
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+G+ A ++ + Q +P+ TY++L+ LC G V+EA LL M+S +
Sbjct: 429 WSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNV 488
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V++NI++ GL K + + +++L M KGC PN +Y ++ G+ EA EL
Sbjct: 489 VSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANS 548
Query: 329 M 329
+
Sbjct: 549 L 549
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 14/220 (6%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K P+ Y +I + R D + ++ + SDG +++ MAG
Sbjct: 340 KEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYM-------ISDGCLPDIVNYNTIMAG 392
Query: 143 -----RISKAIETLFDMPSYNCWPSVKTFNLVLNLL-VSAKLYGEIQGIYTSAAKLGVEI 196
+ +A+E + C P+V ++N + + L S Y ++ I + G++
Sbjct: 393 LCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQ-GIDP 451
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ LC +G ++ A +L + PNV +Y+ ++ GLC+ +A +L
Sbjct: 452 DEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVL 511
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
M +G + T+ +LI G+ G E M+L + G
Sbjct: 512 AAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHG 551
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 115/240 (47%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + +A+ M + C P + +++ L A E + + + A G E +
Sbjct: 155 AGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVV 214
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C G+LE A V + C PNVRTY+ L+ G C+ ++ A L RM
Sbjct: 215 YNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMV 274
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ + VT+ LI G G+++ +LL+ M+ G PN + ++ L +R
Sbjct: 275 DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVG 334
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA+ L+G +I + + + + Y LI GLC D +++ +V QGFVP + ++
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 82/168 (48%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC G + A V C P+ Y+T++HGLC G EA LL +EG
Sbjct: 148 LLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEG 207
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + V +N LI G G +E + + ERM GC PN +Y E++ G ++ A
Sbjct: 208 FEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAM 267
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L RM+ + P+ V+Y LI G C+ ++ +L+ M G VP
Sbjct: 268 MLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVP 315
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 135/297 (45%), Gaps = 15/297 (5%)
Query: 83 KRKDYN---PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK---- 135
+R D N PN YT +I+ ++++ D + R+ G NV+
Sbjct: 236 ERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRM-------VDAGLVPNVVTYTAL 288
Query: 136 IYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
I G + G++ A L M + P+ T +++++ L + GE Q + S + G+
Sbjct: 289 IQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGI 348
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+++ L+ GLC+ G AA ++ Q P+ TYS+L+ GLC + + EA
Sbjct: 349 KVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAML 408
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+L+ M +G+ VT+ I+I L ++ + K+L++M G P+ +Y +
Sbjct: 409 VLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYC 468
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ R +A+ ++ M+ + P+ V+Y LI G N L K MV G P
Sbjct: 469 HEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKP 525
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 130/289 (44%), Gaps = 14/289 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
P+ +Y +++ L A R E ++ E GF NV+ +Y + G
Sbjct: 175 PDPHVYATMVHGLCGAGRTREAETLLSDAMAE-------GFEPNVV-VYNALIDGYCNVG 226
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A++ M C P+V+T+ +++ ++ +++ G+ +
Sbjct: 227 DLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYT 286
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L++G C +G L+ A+ +L PN T S L+ LC+ V EA LL + +
Sbjct: 287 ALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQK 346
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI + + + LI GL K G+ +L++ + +G P++ +Y ++ GL +K EA
Sbjct: 347 GIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEA 406
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ M+ + + PS V+Y +I L + + +L KM+ G P
Sbjct: 407 MLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKP 455
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 128/348 (36%), Gaps = 88/348 (25%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K NE +YT +I+ L +A RF A + +MQ + S GF
Sbjct: 345 QKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTL-------VSQGFV------------- 384
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
P T++ +++ L K E + + GV+ I
Sbjct: 385 -----------------PDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTI 427
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ L + + +LD+ +P+V TY+ + C +G +E+A ++ M G
Sbjct: 428 IIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHG 487
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY----------------- 306
+ + VT+N LI G G + + M GC PN SY
Sbjct: 488 VCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIP 547
Query: 307 -----------QEVLYGLLDK-----------------------KRFPEAKELVGRMICE 332
+ L+GLL++ R EAK L+ M
Sbjct: 548 ANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSA 607
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++PS Y +I C K++ + + MV+ G++P++ +R I+
Sbjct: 608 NLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHII 655
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 134/320 (41%), Gaps = 18/320 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+ YT+II++L + D + I+ ++ + D F Y + GR+
Sbjct: 416 KGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGI--KPDVFTYTIFVRSYCHEGRM 473
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVL----NLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A + M + P++ T+N ++ NL ++++ + + + + K E
Sbjct: 474 EDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVL 533
Query: 201 LNILLKGLCEN------------GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
L +L+K N ++ +L+E K + Y+ + LC
Sbjct: 534 LRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDR 593
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
++EA LL M+S + + +I+ + + E + ++ M G P SY+
Sbjct: 594 LDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRH 653
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ L ++ AK++ G M+ + + ++++ LI GL + V + +L M ++
Sbjct: 654 IISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKN 713
Query: 369 FVPRMGMWREIVGCVTFGKD 388
+ P ++ + G +T D
Sbjct: 714 YRPSDALYARLTGKITDAND 733
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 4/181 (2%)
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
CLN L L + L ++ F + N+RTY+TL++ C G++ + L +
Sbjct: 43 CLNAFLMALARHRMLAD----MESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSL 98
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G D+ + + G + G + +L M +GC + +Y +L+GL
Sbjct: 99 LRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMV 158
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA + M + +P Y ++HGLC + + +L + +GF P + ++ +
Sbjct: 159 REAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNAL 218
Query: 380 V 380
+
Sbjct: 219 I 219
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 102/246 (41%), Gaps = 40/246 (16%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+VL + +K+ + N ++ I K+A+ K + + M ++++ + F ++ +
Sbjct: 531 TVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCR 590
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
+ R+ +A L +M S N PS + +YTS
Sbjct: 591 V-----DRLDEAKILLIEMQSANLTPS--------------------EDVYTS------- 618
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
I ACC C L A +D K P + +Y ++ LCE+G+++ A +
Sbjct: 619 IIACC--------CRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQV 670
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
M S+ + + + + ILI GL ++G V E LL M+ K P+ A Y + + D
Sbjct: 671 FGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITD 730
Query: 316 KKRFPE 321
E
Sbjct: 731 ANDIQE 736
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 143/302 (47%), Gaps = 21/302 (6%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG- 142
R+ P+ Y ++I+ + + D+++++ DG +V+ M G
Sbjct: 386 RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKM-------IEDGHVPDVVTYNTVMDGL 438
Query: 143 ----RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQ-GIYTSAAKL---- 192
R+ +A+ +M C P+ ++ N ++L L +K+ Q G A +L
Sbjct: 439 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRM 498
Query: 193 ---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G D + L+ GLC ++ A ++L++ K+ C+P V T +TL+HGLC+ G +
Sbjct: 499 TDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRI 558
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+EA +L+ M S G D VT+N L+ G + G+ E +LL M +G PN +Y +
Sbjct: 559 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTAL 618
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ GL R PEA + +M +P+ +Y LI G C+ V+ + +MV G
Sbjct: 619 VSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGI 678
Query: 370 VP 371
P
Sbjct: 679 SP 680
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 11/302 (3%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ YT +I+ L A FD ++ + + C S YNV+ G + +A
Sbjct: 355 TPSTVAYTSLIHGLCMANSFDDARELFADMN-RRGCPPSP-VTYNVMIDASCKRGMLEEA 412
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ + M P V T+N V++ L + E ++ +LG + N ++ G
Sbjct: 413 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG 472
Query: 208 LCEN---------GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
LC+ G L+ AF +L P+V TYSTL+ GLC V++A LLE
Sbjct: 473 LCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 532
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M VT N LI GL K G+++E ++L+ M G P+ +Y +++G +
Sbjct: 533 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 592
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
A+EL+ M+ ++P+ V+Y L+ GLC + + V +M G P + +
Sbjct: 593 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 652
Query: 379 IV 380
++
Sbjct: 653 LI 654
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 140/299 (46%), Gaps = 19/299 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-------YNVIKIYGNMA 141
P+E Y +++ L +A R +E+ ++ +L S YN++ +
Sbjct: 245 PDEVSYCTVLDGLCKAGR---VEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQN 301
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
RI +A++ M N P ++ ++++ L A + + ++ GV
Sbjct: 302 DRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAY 361
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC + + A + + ++ C P+ TY+ ++ C++G +EEA L+++M
Sbjct: 362 TSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIE 421
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL-------- 313
+G D VT+N ++ GL K +VEE + L M+ GC PN S+ ++ GL
Sbjct: 422 DGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQ 481
Query: 314 -LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + EA L+ RM + P V+Y LI GLC+ V+D +L+ MV++ P
Sbjct: 482 ACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 540
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 98/208 (47%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A L M P V T++ +++ L S + + + K +
Sbjct: 486 GKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQ 545
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC+ G ++ A VLD P+V TY+TL+HG C G E A LL M +
Sbjct: 546 NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA 605
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ + VT+ L+SGL K ++ E + +MK GC PN +Y ++ G +
Sbjct: 606 RGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDG 665
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC 349
+L G M+C +SP V Y L LC
Sbjct: 666 GLKLFGEMVCAGISPDHVVYGTLAAELC 693
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 145/353 (41%), Gaps = 73/353 (20%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLC----------- 123
P+ +T I+ L +A + D E +M ++ +LC
Sbjct: 77 PDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQL 136
Query: 124 ----RFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
++ YN++ + A R+ A+E M + + + VL L+ +
Sbjct: 137 LEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRI 196
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
E +Y + E LN+LL+G C G ++ A +L P + C P+ +Y T+
Sbjct: 197 DEALQVYRENRR---EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTV 253
Query: 240 MHGLCEKGNVEEA---FG--------------------------------------LLER 258
+ GLC+ G VEEA FG + E+
Sbjct: 254 LDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEK 313
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M + D+ ++ ILI GL K GK+ + L +++ G P++ +Y +++GL
Sbjct: 314 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 373
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
F +A+EL M PS V+Y +I C + ++E+ ++KKM++ G VP
Sbjct: 374 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVP 426
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 137/331 (41%), Gaps = 16/331 (4%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF-----SDGFFYNVIKIY 137
+R PN + II L Q + D QR K+++ R DG +V+
Sbjct: 455 ERLGCTPNRRSHNTIILGLCQQSKID---QACQRGKLDEAFRLLKRMTDDGHVPDVVTYS 511
Query: 138 GNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
++G R+ A L DM C P+V T N +++ L A E + + +
Sbjct: 512 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSS 571
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D N L+ G C G E A +L + + PNV TY+ L+ GLC+ + EA
Sbjct: 572 GQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 631
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
G+ +M+S G + T+ LI G G+V+ G+KL M G P+ Y +
Sbjct: 632 CGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAE 691
Query: 313 LLDKKRFPEAKELV--GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
L R A E++ GR + Y+ + GL +E ++ MV+ G +
Sbjct: 692 LCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQL 751
Query: 371 PRMGMWREIV-GCVTFGKDNRNRVYVTETVD 400
P +V G G+ R + E +D
Sbjct: 752 PAPERCASLVAGLCKSGQGGEARAVLEEIMD 782
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 9/243 (3%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F +VI+ + N+ GR +A++ +F + P +N++++ L + ++ +
Sbjct: 12 LFTSVIQGWCNV-GRTFEAVK-IFSLMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQV 69
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G D+ +L GLC+ G ++ A V+DE + P T S L H LC +G+
Sbjct: 70 MVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGS 129
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+E AF LLE M A++ +NI++ L K +V++ ++L M K + S
Sbjct: 130 MERAFQLLEIMPV----ANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDS 185
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
VL GL+D R EA ++ R P V+ L+ G C++ V+ +L+ M +
Sbjct: 186 VLVGLMDSGRIDEALQVYRE---NRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEE 242
Query: 369 FVP 371
P
Sbjct: 243 CAP 245
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEA---FGLLERMESEGIDADTVTFNILISGLRKQG 282
+Q P +++++ G C G EA F L+E S D +N+LI L K+
Sbjct: 3 QQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPD----VYNVLIDSLSKRQ 58
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+ E K+++ M +GC+P+S ++ +L GL + EA+ ++ M + P F +
Sbjct: 59 ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118
Query: 343 KLIHGLCNQKLVEDVDWVLKKM 364
L H LC + +E +L+ M
Sbjct: 119 FLAHELCLRGSMERAFQLLEIM 140
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ F +L + K Y + + T GV + LNIL+ C + AF V
Sbjct: 54 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K +P+ T++TL+ GLC +G + EA L ++M EG + VT+ LI+GL K
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++LL M+ C P+ Y ++ L ++ EA L +M+ + +SP +
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y L+H LCN + V +L +MV +P + ++ +V
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 273
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ P+V T N+++N G + KLG + D L++GLC G
Sbjct: 82 MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 141
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A ++ D+ + +PNV TY TL++GLC+ GN A LL ME D V +
Sbjct: 142 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 201
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I L K +V E L +M G+G P+ +Y +++ L + + L+ +M+ +
Sbjct: 202 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 261
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P V + ++ LC + V + ++ M+Q+G P
Sbjct: 262 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 299
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 136/293 (46%), Gaps = 4/293 (1%)
Query: 74 VISVLNQYSKR--KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
V N +S+ + +P+ YT +++ L + + ++ ++ K+ D +
Sbjct: 212 VTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI--LPDVVIF 269
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ + G++++A E + M P V T+ +++ E ++ +
Sbjct: 270 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 329
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G D L+ G C+ ++ A Y+ +E ++ P+ +TY+TLMHGLC G +++
Sbjct: 330 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQD 389
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A L M + G D VT++IL+ L K +EE M LL+ ++ P+ Y ++
Sbjct: 390 AIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIID 449
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
G+ A++L + + + PS +Y +IHGLC + L+ + + + +M
Sbjct: 450 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 502
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 2/230 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ A L + P TF L+ L V K+ GE ++ G + +
Sbjct: 106 RVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKI-GEALHLFDKMIDEGFQPNVVTY 164
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC+ GN AA +L + NC+P+V Y++++ LC+ V EAF L +M
Sbjct: 165 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVG 224
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI D T+ L+ L + + LL +M P+ + V+ L + + E
Sbjct: 225 QGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTE 284
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A E+V MI + P V+Y L+ G C Q +++ V MV++GF P
Sbjct: 285 AHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 334
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 130/293 (44%), Gaps = 14/293 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------ 140
+ P+ +T +I L + + ++ +GF NV+ YG +
Sbjct: 122 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKM-------IDEGFQPNVVT-YGTLINGLCK 173
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G S AI L M NC P V + +++ L + E +++ G+ D
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ LC + +L++ P+V +ST++ LC++G V EA +++ M
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G++ D VT+ L+ G Q +++E +K+ + M KG P+ SY ++ G +
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 353
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+A L M + P +Y L+HGLC+ ++D + +MV +G +P +
Sbjct: 354 KAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDL 406
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 146/334 (43%), Gaps = 6/334 (1%)
Query: 49 KLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKD--YNPNEALYTLIINKLAQAKR 106
KL H+ PT + L + L+ + K D + PN Y +IN L +
Sbjct: 119 KLGHQP--DPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 176
Query: 107 FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF 166
A +++ ++ + C+ D Y I ++++A M P + T+
Sbjct: 177 TSAAIRLLRSME-QGNCQ-PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTY 234
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
+++ L + + + + + D + ++ LC+ G + A ++D +
Sbjct: 235 TSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ 294
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+ EP+V TY+TLM G C + ++EA + + M +G D +++ LI+G K K+++
Sbjct: 295 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDK 354
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
M L E M K P++ +Y +++GL R +A L M+ P V+Y L+
Sbjct: 355 AMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLD 414
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LC +E+ +LK + P + ++ I+
Sbjct: 415 SLCKNCHLEEAMALLKAIEASNLNPDIQVYNIII 448
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+I KA+ +M P KT+N +++ L + ++ G D +
Sbjct: 351 KIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYS 410
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
ILL LC+N +LE A +L N P+++ Y+ ++ G+C G +E A L + S+
Sbjct: 411 ILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSK 470
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ T+NI+I GL K+G + E KL M G C P+ +Y + G L A
Sbjct: 471 GLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRA 530
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+L+ M+ S + L+ L + L
Sbjct: 531 IQLLEEMLARGFSADVSTTTLLVEMLSDDGL 561
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 140/319 (43%), Gaps = 9/319 (2%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDA---I 110
D + T ++ NL + V ++LNQ K P+ +++ +++ L + + I
Sbjct: 230 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKIL-PDVVIFSTVVDALCKEGKVTEAHEI 288
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
D+M + VE D Y + + + +A++ M P V ++ ++
Sbjct: 289 VDMMIQRGVEP-----DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 343
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
N + ++ + D N L+ GLC G L+ A + E +
Sbjct: 344 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQM 403
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P++ TYS L+ LC+ ++EEA LL+ +E+ ++ D +NI+I G+ + G++E L
Sbjct: 404 PDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 463
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+ KG +P+ +Y +++GL + EA +L M SP +Y + G
Sbjct: 464 FSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQ 523
Query: 351 QKLVEDVDWVLKKMVQQGF 369
+L++M+ +GF
Sbjct: 524 NNETLRAIQLLEEMLARGF 542
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 74/194 (38%), Gaps = 37/194 (19%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++++ L + + +++ I+ L D YN+I AG + A
Sbjct: 404 PDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLN--PDIQVYNIIIDGMCRAGELEAAR 461
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ ++ S PSV T+N I++ GL
Sbjct: 462 DLFSNLSSKGLHPSVWTYN-----------------------------------IMIHGL 486
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G L A + E +C P+ TY+T+ G + A LLE M + G AD
Sbjct: 487 CKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADV 546
Query: 269 VTFNILISGLRKQG 282
T +L+ L G
Sbjct: 547 STTTLLVEMLSDDG 560
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 120/247 (48%)
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
D F YN I + +A E L D P T+ ++N L +
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
++ A G++ D N L+KGLC G + A V++E ++ C P+++TY+ +++GLC
Sbjct: 347 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 406
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ GN+ +A ++ +G D TFN LI G K+ K++ ++L+ERM G P++
Sbjct: 407 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI 466
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y VL GL + E E MI + P+ ++Y LI C +E+ V+ KM
Sbjct: 467 TYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 526
Query: 365 VQQGFVP 371
Q+G P
Sbjct: 527 SQEGLHP 533
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 130/249 (52%), Gaps = 3/249 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + +A+E + + P + +N LV L + + +Q + A+ G D
Sbjct: 339 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ-VMNEMAEEGCHPDIQT 397
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI++ GLC+ GN+ A V+++ + P+V T++TL+ G C++ ++ A L+ERM
Sbjct: 398 YNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMW 457
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI DT+T+N +++GL K GKV E + + M KGC+PN +Y ++ +
Sbjct: 458 EYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKME 517
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA +++ +M E + P VS+ LI+G C +E + +K+ ++G+ + ++
Sbjct: 518 EASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 577
Query: 381 GCVTFGKDN 389
G + GK N
Sbjct: 578 GAFS-GKLN 585
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 144/335 (42%), Gaps = 37/335 (11%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P++ Y +IN L + ++ + + + D YN + + G I
Sbjct: 319 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI--KPDIVVYNSLVKGLCLQGLI 376
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLN-------------LLVSAKLYGEIQGIYT---- 187
A++ + +M C P ++T+N+V+N ++ A + G + ++T
Sbjct: 377 LHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL 436
Query: 188 -----------SAAKL-------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
SA +L G+ D N +L GLC+ G + E + C
Sbjct: 437 IDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGC 496
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
PN TY+ L+ C +EEA ++ +M EG+ D V+FN LI G + G +E
Sbjct: 497 HPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 556
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
L ++++ KG + ++ ++ K A+++ M+ + +Y+ LI G C
Sbjct: 557 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 616
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
V+ L +M+++GF+P M + ++ +T
Sbjct: 617 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 651
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
I+ Y AGR+ A++ M + C P+ +N +++ LV A + + +Y G
Sbjct: 57 IRAYAR-AGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAG 115
Query: 194 VEIDACCLNILLKGLC-------------------------------ENGNLEAAFYVLD 222
V D I L+ C +G+ A + D
Sbjct: 116 VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFD 175
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
+ + PN+ ++ ++H LC++G+V EA LL ++ G+ + T+NI I GL + G
Sbjct: 176 QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 235
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
++ E ++L++ M+ P+ +Y ++ GL K EA + RM+ + P +Y
Sbjct: 236 RLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 294
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+I G C +V++ +LK V +GFVP
Sbjct: 295 TIIDGYCKISMVQEATELLKDAVFKGFVP 323
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 140/302 (46%), Gaps = 4/302 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN A + +++ L KR D +E + KV + + F YN+ AGR+ +A+
Sbjct: 184 PNLAAFNKVLHALC--KRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV 241
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M +Y P V T+N ++ L + E G D N ++ G
Sbjct: 242 RLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGY 300
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ ++ A +L + + P+ TY +L++GLC +G+VE A L +++GI D
Sbjct: 301 CKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI 360
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +N L+ GL QG + ++++ M +GC+P+ +Y V+ GL +A ++
Sbjct: 361 VVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMND 420
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
I + P ++ LI G C + ++ ++++M + G P + ++ G GK
Sbjct: 421 AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK 480
Query: 388 DN 389
N
Sbjct: 481 VN 482
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%)
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A+ L M + C P T+N +++ + E + A G D L+
Sbjct: 273 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 332
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC G++E A + +E + +P++ Y++L+ GLC +G + A ++ M EG
Sbjct: 333 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 392
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D T+NI+I+GL K G + + ++ KG P+ ++ ++ G + + A +L
Sbjct: 393 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 452
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
V RM ++P ++Y +++GLC V +V+ ++M+ +G P
Sbjct: 453 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP 498
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 135/302 (44%), Gaps = 3/302 (0%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+ + V+N+ ++ + +P+ Y ++IN L + +M ++ D F +
Sbjct: 377 LHALQVMNEMAE-EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY--LPDVFTF 433
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + ++ A++ + M Y P T+N VLN L A E+ +
Sbjct: 434 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 493
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G + NIL++ C + +E A V+ + ++ P+ +++TL++G C G++E
Sbjct: 494 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 553
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A+ L +++E +G A TFN LI + + K+ + M KG +S +Y+ ++
Sbjct: 554 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 613
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G A + MI + PS ++ ++I+ L V ++ MV+ G VP
Sbjct: 614 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673
Query: 372 RM 373
+
Sbjct: 674 EV 675
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 122/268 (45%), Gaps = 2/268 (0%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
IS +V+ + K Y P+ + +I+ + + D+ +++R+ + D Y
Sbjct: 411 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA--PDTITY 468
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + AG++++ ET +M C P+ T+N+++ + E + ++
Sbjct: 469 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ 528
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ DA N L+ G C NG+LE A+ + + ++ T++TL+ K N+
Sbjct: 529 EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 588
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A + + M S+G AD+ T+ +LI G K V+ L M KG P+ +++ V+
Sbjct: 589 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 648
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFV 339
L R +A ++ M+ + P V
Sbjct: 649 SLTVNHRVFQAVGIIHIMVKIGVVPEVV 676
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 113/207 (54%), Gaps = 4/207 (1%)
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+D LL GLC+ G L+ A +LDE P C P++ ++ +++GLC + ++EAF +
Sbjct: 7 VDTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSV 63
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
LER G + D VT+N+ I GL K +V++ +LL++M K C P + +Y ++ GLL
Sbjct: 64 LERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLK 123
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
R EA ++ +M+ + SP+ +Y +I GL VE+ + M+ G P +
Sbjct: 124 AGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFV 183
Query: 376 WREIV-GCVTFGKDNRNRVYVTETVDS 401
+ ++ G GK + VY+ + V++
Sbjct: 184 YTALISGLAKIGKLDEALVYLNQMVEN 210
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 142/307 (46%), Gaps = 4/307 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I+ + + S+R+ + P YT +++ + R D E ++Q + + D Y I
Sbjct: 274 IAFVKKMSERRCF-PTLFTYTSLVDGFLKLGRLD--EALLQLKEAVERGFIPDAVTYTSI 330
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
GR+ + E +M + P T+ +++ + AK+ + +Y + G
Sbjct: 331 IDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGT 390
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ NI+L GLC+ G + A+ ++ C V TYS LM G C +GNV A
Sbjct: 391 VVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVE 450
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L RM G + + V++NI+I GL + GK+ + E++ + P+ ++ L+GL
Sbjct: 451 LFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLC 510
Query: 315 DK-KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ + EL M+ + SP+ SY L+ G+C +E + +MV +G P +
Sbjct: 511 QRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDV 570
Query: 374 GMWREIV 380
++ ++
Sbjct: 571 VVFNTLI 577
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 7/219 (3%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A+ L +MP C P + F +V+N L K E + A + G E D
Sbjct: 23 GQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTY 79
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+ + GLC+ ++ AF +L + ++ C P TY+ L+ GL + G ++EA +LE+M
Sbjct: 80 NVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVE 139
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G T+ ++I GL K G+VEE ++ M G GC P++ Y ++ GL + E
Sbjct: 140 KGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDE 199
Query: 322 AKELVGRMI---CER-MSPSFVSYKKLIHGLCNQKLVED 356
A + +M+ C R + P V + +I LC +ED
Sbjct: 200 ALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLED 238
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 141/300 (47%), Gaps = 8/300 (2%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
SVL + + R P+ Y + I+ L +A+R D +++++ EK C Y +
Sbjct: 62 SVLER-AVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD-EKKC-LPTTVTYTALV 118
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
AGR+ +A+ L M P++KT+ +V++ L A E + I+ G
Sbjct: 119 DGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCR 178
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC----EPNVRTYSTLMHGLCEKGNVEE 251
DA L+ GL + G L+ A L++ + C EP+V ++ ++ LC GN+E+
Sbjct: 179 PDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLED 238
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A + ++ + +D TFN L++ L K + EE + +++M + C+P +Y ++
Sbjct: 239 ALAYFDELD-DSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVD 297
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G L R EA + + P V+Y +I GLC VE+ +M +G+ P
Sbjct: 298 GFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEP 357
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 90/172 (52%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D +++ GLC L+ AF VL+ + CEP+ TY+ + GLC+ V++AF LL
Sbjct: 40 DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 99
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
++M+ + TVT+ L+ GL K G+++E M +LE+M KG P +Y V+ GL
Sbjct: 100 KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKA 159
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
R EA+ + M+ P Y LI GL +++ L +MV+ G
Sbjct: 160 GRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENG 211
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 143/305 (46%), Gaps = 18/305 (5%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL---CRFSDGFFY 131
+++L Q ++ + +P YT++I+ L++A R + +RI V+ L CR D F Y
Sbjct: 131 MAILEQMVEKGN-SPTLKTYTVVIDGLSKAGRVEE----ARRIFVDMLGNGCR-PDAFVY 184
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCW----PSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+ G++ +A+ L M C P V NLV+ L ++ G ++
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCAS---GNLEDALA 241
Query: 188 SAAKLGVEIDAC--CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+L +D N L+ LC+ E A + + ++ C P + TY++L+ G +
Sbjct: 242 YFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLK 301
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G ++EA L+ G D VT+ +I GL K G+VEEG + M+ +G P++ +
Sbjct: 302 LGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVT 361
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + K P+A + +M+ S V+Y ++ GLC V + M
Sbjct: 362 YAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAME 421
Query: 366 QQGFV 370
++G V
Sbjct: 422 ERGCV 426
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 39/290 (13%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ + Y P+ Y +I+ +AK + +++ YN+I AG
Sbjct: 351 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG--TVVSTVTYNIILDGLCKAG 408
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+++A T M C +V T++ +++ S ++ G E + N
Sbjct: 409 RVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYN 468
Query: 203 ILLKGLCENGNLEAAFY------------------------------------VLDEFPK 226
I+++GLC G L A++ + +
Sbjct: 469 IIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVS 528
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
Q PN+ +YS LM G+C G +E + M S G+ D V FN LI L G+V+E
Sbjct: 529 QGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDE 588
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
+++ ++ + P++ SY +L L +R EA+ L M + +P
Sbjct: 589 ALEVFRELERRSA-PDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 136/300 (45%), Gaps = 3/300 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + + +T ++ L KR DI+ R ++ +L + F YN++ R
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR-RMTQLGCIPNVFSYNILLKGLCDENR 177
Query: 144 ISKAIETLFDMP--SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+A+E L MP +C P V ++ V+N + G Y G+ +
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ LC+ ++ A VL K PN RTY++++HG C G +EA G L++M S
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G++ D VT+N L+ L K G+ E K+ + M +G P +Y +L G K E
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
L+ M+ + P+ + LI Q V+ V KM QQG P + ++G
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 120/269 (44%), Gaps = 12/269 (4%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG--- 142
D P+ YT +IN + D + G NV+ +A
Sbjct: 194 DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM-------LDRGILPNVVTYSSIIAALCK 246
Query: 143 --RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ KA+E L M P+ +T+N +++ S+ E G GVE D
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ LC+NG A + D K+ +P + TY TL+ G KG + E GLL+ M
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI + F+ILI KQGKV++ M + +M+ +G P++ +Y V+ L R
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLC 349
+A +MI ER+SP + Y LIH LC
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 23/273 (8%)
Query: 70 DPISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFD-AIEDI 113
D +S +V+N + K D + PN Y+ II L +A+ D A+E +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 114 MQRIK--VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+K V CR YN I +G+ +AI L M S P V T+N +++
Sbjct: 258 TSMVKNGVMPNCRT-----YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L E + ++ S K G++ + LL+G G L +LD + P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N +S L+ ++G V++A + +M +G++ DTVT+ +I L K G+VE+ M+
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
E+M + P + Y +++ L ++ +AK+
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKD 465
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PN+ TY L+ C G ++ F L + +G D + F L+ GL + + M +
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 291 -LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE--RMSPSFVSYKKLIHG 347
L RM GC PN SY +L GL D+ R EA EL+ M + P VSY +I+G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++ +M+ +G +P + + I+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSII 241
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 137/294 (46%), Gaps = 12/294 (4%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-- 140
K + P+ Y +++ ++ E+++Q + F G V+ +
Sbjct: 139 KELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEM-------FEKGLAPCVVTCTAVINA 191
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
GR+S A+ L M C P+V T+N ++ + + + GV D
Sbjct: 192 YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPD 251
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A N+L++G C +G++E+AF +L + TY+ L++ LC+ G ++A L +
Sbjct: 252 AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFD 311
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+E+ GI + VTFN LI+GL K GKV+ K LE+M GC P++ +Y + L K
Sbjct: 312 SLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK 371
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E +G M+ + + PS V+Y +IH L ++ V +MV G P
Sbjct: 372 GSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 425
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 2/232 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGR + + L M PS + + V++ + E + + + G+
Sbjct: 125 AGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVT 184
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
++ C+ G + A VL+ + C+PNV TY+ L+ G C +G V +A LL +M
Sbjct: 185 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMR 244
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G++ D VT+N+LI G G +E +LL M+G G + +Y ++ L R
Sbjct: 245 VCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 304
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW-VLKKMVQQGFVP 371
+A L + + P+ V++ LI+GLC V D+ W L+KMV G P
Sbjct: 305 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKV-DIAWKFLEKMVSAGCTP 355
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 128/284 (45%), Gaps = 2/284 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ +Y ++ L +A R + E ++ ++++L Y + + + +A
Sbjct: 109 QPDMHMYAALVKGLCKAGRGE--EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEA 166
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L +M P V T V+N + + G + + N L++G
Sbjct: 167 EEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG 226
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C G + A +L++ P+ TY+ L+ G C G++E AF LL ME +G+ AD
Sbjct: 227 FCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIAD 286
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+N LI+ L K G+ ++ L + ++ +G PN+ ++ ++ GL + A + +
Sbjct: 287 QYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLE 346
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+M+ +P +Y I LC K ++ + +M+Q+ P
Sbjct: 347 KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 390
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 136/292 (46%), Gaps = 18/292 (6%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P T +IN + R +++ +K+ + C+ + + +++ + N G++
Sbjct: 176 KGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKL-RGCKPNVWTYNALVQGFCN-EGKV 233
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE-IQGIYTSAAKL-------GVEI 196
KA+ L M P T+NL++ G+ I G SA +L G+
Sbjct: 234 HKAMALLNKMRVCGVNPDAVTYNLLIR--------GQCIDGHIESAFRLLRLMEGDGLIA 285
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ LC++G + A + D + +PN T+++L++GLC+ G V+ A+ L
Sbjct: 286 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFL 345
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E+M S G DT T++ I L K +EG+ + M K P++ +Y V++ LL +
Sbjct: 346 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 405
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ + G M+ +P V+Y + C + + + + VL +M + G
Sbjct: 406 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 457
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 126/305 (41%), Gaps = 8/305 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS- 126
+ D + V+ ++ K + PN Y ++ + ++ +++V C +
Sbjct: 198 MSDALRVLELM----KLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRV---CGVNP 250
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN++ + G I A L M T+N ++N L + ++
Sbjct: 251 DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLF 310
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S G++ +A N L+ GLC++G ++ A+ L++ C P+ TYS+ + LC+
Sbjct: 311 DSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 370
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+E + M + + TV + I+I L K+ + M GC P+ +Y
Sbjct: 371 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 430
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+ + R EA+ ++ M ++ ++Y L+ G + + +LK+M
Sbjct: 431 TTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS 490
Query: 367 QGFVP 371
VP
Sbjct: 491 VASVP 495
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 118/308 (38%), Gaps = 59/308 (19%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G++ A + L M S C P T++ + L K+ G +G+ L ++
Sbjct: 335 SGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHL--CKMKGSQEGLSFIGEMLQKDVKPST 392
Query: 201 LN--ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+N I++ L + N E C P+V TY+T M C +G + EA +L
Sbjct: 393 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLME 452
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP----------------- 301
M G+ DT+ +N L+ G G+ + + +L++M P
Sbjct: 453 MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRL 512
Query: 302 -----------------------------------NSASYQEVLYGLLDKKRFPEAKELV 326
NS +Y +L G + R EA LV
Sbjct: 513 VEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLV 572
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK-KMVQQGFVPRMGMWREIV-GCVT 384
M + +S + Y L+ C K D WVL M+Q GF+P + ++ ++ G +
Sbjct: 573 SLMKEDSISLNEDIYTALVTCFCKSKRYLDA-WVLVCSMIQHGFIPHLMSYQHLLSGLIC 631
Query: 385 FGKDNRNR 392
G+ ++ +
Sbjct: 632 EGQTDKAK 639
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +++ LC +L +A L + P+ T+++L+ G C V+ A L ++M
Sbjct: 15 NAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPL 74
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D V++ LI G + G+++E ++L M P+ Y ++ GL R E
Sbjct: 75 RGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRGEE 130
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ RM PS +Y ++ C ++ ++ + +L++M ++G P
Sbjct: 131 GLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAP 180
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 20/261 (7%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NP+ YT + R + E+++ +++ K D YN + G+ A
Sbjct: 424 NPDVVTYTTSMRAYCIEGRLNEAENVL--MEMSKNGVTVDTMAYNTLMDGHASIGQTDHA 481
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M S P+ T+ ++L LV +L ++ + + +E
Sbjct: 482 VSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIE------------ 529
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L F + D K PN TYS+++ G E G EEA L+ M+ + I +
Sbjct: 530 ------LTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLN 583
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+ L++ K + + L+ M G P+ SYQ +L GL+ + + +AKE+
Sbjct: 584 EDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFM 643
Query: 328 RMICERMSPSFVSYKKLIHGL 348
+ SP + +K +I GL
Sbjct: 644 NSRWKDYSPDEIVWKVIIDGL 664
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 120/327 (36%), Gaps = 55/327 (16%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+KD P+ YT++I+KL + + YG +A
Sbjct: 385 QKDVKPSTVNYTIVIHKLLKERN------------------------------YGLVA-- 412
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
T +M S C P V T+ + E + + +K GV +D N
Sbjct: 413 -----RTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 467
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA----------- 252
L+ G G + A +L + PN TY L+ L VE+
Sbjct: 468 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKA 527
Query: 253 ------FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
FGL + M+ ++ T++ ++ G + G+ EE L+ MK N Y
Sbjct: 528 IELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIY 587
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ KR+ +A LV MI P +SY+ L+ GL + + +
Sbjct: 588 TALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRW 647
Query: 367 QGFVPRMGMWREIV-GCVTFGKDNRNR 392
+ + P +W+ I+ G + G + +R
Sbjct: 648 KDYSPDEIVWKVIIDGLIKKGHSDISR 674
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TY+ ++ LC + ++ A L M G D TFN LI G + +V+ L ++M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+G + SY ++ G + R EA EL G M P Y L+ GLC
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
E+ +L++M + G+ P + +V
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVV 154
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 122/247 (49%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 85 SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 144
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 145 FNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PNS ++ ++ G R
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVD 264
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 324
Query: 381 -GCVTFG 386
GC G
Sbjct: 325 DGCCKDG 331
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 143 YFFNILMHRFCKDGDIRIA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 199
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCK 259
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 260 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKIT 319
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G A E RMI E V Y LI GLC + D + +L++M+
Sbjct: 320 YTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREML 379
Query: 366 QQGFVPRMGMWREIV 380
G P + I+
Sbjct: 380 SVGLKPDARTYTMII 394
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 110/211 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ ++ L+ G C+NG ++ A +
Sbjct: 210 PDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEI 269
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G K
Sbjct: 270 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCK 329
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++ + +RM + + Y ++ GL + + +A++++ M+ + P +
Sbjct: 330 DGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDART 389
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 39/261 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISK 146
P+ Y+++IN L + + D ++ + V+ L S F I G+ GR+
Sbjct: 209 QPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTF---TTLIDGHCKNGRVDL 265
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+E M S + P + T+N L+
Sbjct: 266 AMEIYKQMLSQSLSPDLITYN-----------------------------------TLIY 290
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ G+L+ A +++DE + +P+ TY+TL+ G C+ G+++ AF +RM E
Sbjct: 291 GLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRL 350
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D V + LISGL ++G+ + K+L M G P++ +Y ++ K + +L+
Sbjct: 351 DDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 410
Query: 327 GRMICERMSPSFVSYKKLIHG 347
M + PS V+Y L++G
Sbjct: 411 KEMQRDGHVPSVVTYNVLMNG 431
>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
Length = 375
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 149/302 (49%), Gaps = 4/302 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +II+ + + D +++ + + C+ + + V+K + ++ R A
Sbjct: 8 PNNVTYNVIIDAMCREGDVDQARELLNSLP-SRSCKPNTVNYNTVLKGFCSIE-RWVDAN 65
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L ++ S NC P+ T N+ +N L L ++ +K G + N ++ GL
Sbjct: 66 EILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIGGL 125
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
CE GN+++A +L C+P++ TY+T++ GLC E+A L+ +M D
Sbjct: 126 CEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLRDN 185
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
TFN +IS ++G + + +++ ++M KGC PNS +Y ++ GL+ + +A EL+
Sbjct: 186 STFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALELLNE 245
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI-VGCVTFGK 387
M + + + Y L L + +E+V V+ K+ G P+ ++ + +G GK
Sbjct: 246 MANKGFNTDKM-YLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGK 304
Query: 388 DN 389
N
Sbjct: 305 TN 306
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 149/328 (45%), Gaps = 54/328 (16%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK-- 118
VLK F ++ + +L++ ++ PNEA + IN L + + ++Q++
Sbjct: 51 VLKGFCSIERWVDANEILDEVVS-ENCPPNEATLNVTINTLCR-------KGLLQKVTRY 102
Query: 119 VEKLCRFSDGFFYNVIK---IYGNMA--GRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+EK+ + G NV+ I G + G + A+E L +M S+ C P + T+N VL L
Sbjct: 103 LEKMSKH--GCTTNVVTYNAIIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGL 160
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
SA + + + + ++ D N ++ C+ G + A V + P++ C PN
Sbjct: 161 CSADRWEDAEELMIKMSQNDRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNS 220
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD-------------------------- 267
TYST++ GL + +E+A LL M ++G + D
Sbjct: 221 TTYSTIIGGLVKASKMEQALELLNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQVVHKL 280
Query: 268 --------TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
TV +N ++ GL + GK + +L M GC P+ ++Y ++ GL +
Sbjct: 281 QDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYL 340
Query: 320 PEAKELVGRMICER--MSPSFVSYKKLI 345
EA+EL+ R+ C R +S S + + L+
Sbjct: 341 KEARELLSRL-CSRDVLSNSLIKNEALL 367
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 35/224 (15%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG---------- 242
G E + N+++ +C G+++ A +L+ P ++C+PN Y+T++ G
Sbjct: 5 GCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIERWVDA 64
Query: 243 -------------------------LCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
LC KG +++ LE+M G + VT+N +I G
Sbjct: 65 NEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIGG 124
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L +QG V+ ++LL M+ GC P+ +Y VL GL R+ +A+EL+ +M
Sbjct: 125 LCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLRD 184
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
++ +I C + L+ V K+M ++G P + I+G
Sbjct: 185 NSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIG 228
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 68/123 (55%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M +EG + + VT+N++I + ++G V++ +LL + + C PN+ +Y VL G +R
Sbjct: 1 MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIER 60
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
+ +A E++ ++ E P+ + I+ LC + L++ V L+KM + G + +
Sbjct: 61 WVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNA 120
Query: 379 IVG 381
I+G
Sbjct: 121 IIG 123
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 35/175 (20%)
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV----------------- 269
+ CEPN TY+ ++ +C +G+V++A LL + S +TV
Sbjct: 4 EGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIERWVD 63
Query: 270 ------------------TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
T N+ I+ L ++G +++ + LE+M GC N +Y ++
Sbjct: 64 ANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIG 123
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
GL ++ A EL+ M P V+Y ++ GLC+ ED + ++ KM Q
Sbjct: 124 GLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQ 178
>gi|302767038|ref|XP_002966939.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
gi|300164930|gb|EFJ31538.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
Length = 506
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 151/299 (50%), Gaps = 8/299 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+LII+ L ++ D + +++R+ + + C D Y+ + + GR+ +A+E +
Sbjct: 185 YSLIIHSLCKSGMVDKAKVLVERM-ISRNC-VPDARIYDPVIEELSKTGRVDEAVEIAKE 242
Query: 154 MPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+ +C SV T+N LVL L + +L I+ ++T A+ G D NIL +GL +G
Sbjct: 243 ADAKHC-TSVVTYNSLVLGFLKARRLKRGIK-VFTRMARTGPSPDIYTYNILFEGLSRHG 300
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
A+ +L + P+ T+++L++GL E A L++ M S G D + +T+
Sbjct: 301 LWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYT 360
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
IL+ L + + +E ++L +R+ + PN +Y V+ L R +A L G M+
Sbjct: 361 ILLKWLARNARADECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLAS 420
Query: 333 RMS-PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
+ P+ ++Y+ LIHGLC + +E +L M ++ P + + IV F K R
Sbjct: 421 DCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRDCAPDVACYGTIVA--AFCKQGR 477
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 4/281 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +Y +I +L++ R D +I + K C + YN + + A R+ + I
Sbjct: 215 PDARIYDPVIEELSKTGRVDEAVEIAKEADA-KHC--TSVVTYNSLVLGFLKARRLKRGI 271
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M P + T+N++ L L+ + + GV DA N L+ GL
Sbjct: 272 KVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDAVTFNSLINGL 331
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
E+ A ++ E + C+PN TY+ L+ L +E L +R+ + +
Sbjct: 332 VEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARNARADECVELFQRLLDRKLAPNV 391
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYP-NSASYQEVLYGLLDKKRFPEAKELVG 327
T+N ++S L K G++++ +L M C P N+ +Y+ +++GL K A L+
Sbjct: 392 YTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLD 451
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
M +P Y ++ C Q +++ +L++M G
Sbjct: 452 AMAKRDCAPDVACYGTIVAAFCKQGRIDEAFELLERMPFAG 492
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 128/291 (43%), Gaps = 37/291 (12%)
Query: 141 AGRISKAIETLFDMP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
AG + A+E + S++ SV T+++++ L +AK ++ I +G+E D
Sbjct: 124 AGNVDGALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREMESVGLEADKD 183
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA------- 252
++++ LC++G ++ A +++ +NC P+ R Y ++ L + G V+EA
Sbjct: 184 TYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAVEIAKEA 243
Query: 253 ---------------FGLLE------------RMESEGIDADTVTFNILISGLRKQGKVE 285
G L+ RM G D T+NIL GL + G
Sbjct: 244 DAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWR 303
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
KLL RM G P++ ++ ++ GL++ R+ A L+ M+ P+ ++Y L+
Sbjct: 304 FAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILL 363
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRNRVY 394
L ++ + ++++ + P + + ++ C D +R++
Sbjct: 364 KWLARNARADECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLF 414
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 8/226 (3%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D + YN++ + G A + L M P TFN ++N LV Y +
Sbjct: 285 DIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLI 344
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
G + +A ILLK L N + + + PNV TY+T+M LC+
Sbjct: 345 QEMVSRGCDPNAITYTILLKWLARNARADECVELFQRLLDRKLAPNVYTYNTVMSALCKA 404
Query: 247 GNVEEA---FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
G +++A FG++ + S+ + +T+ LI GL + ++E + LL+ M + C P+
Sbjct: 405 GRLDQAHRLFGVM--LASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRDCAPDV 462
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
A Y ++ + R EA EL+ RM + V ++ L+ LC
Sbjct: 463 ACYGTIVAAFCKQGRIDEAFELLERM---PFAGDKVMFRTLVRALC 505
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 15/191 (7%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
LN L+GLC+ GN++ A E + +V TYS L+ L + + +L M
Sbjct: 114 LNGCLRGLCKAGNVDGALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREM 173
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
ES G++AD T++++I L K G V++ L+ERM + C P++ Y V+ L R
Sbjct: 174 ESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRV 233
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-------- 371
EA E + + + S V+Y L+ G + ++ V +M + G P
Sbjct: 234 DEAVE-IAKEADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNIL 292
Query: 372 -----RMGMWR 377
R G+WR
Sbjct: 293 FEGLSRHGLWR 303
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 82/193 (42%), Gaps = 39/193 (20%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN YT+++ LA+ R D ++ QR+ KL + + YN + AGR+ +A
Sbjct: 353 DPNAITYTILLKWLARNARADECVELFQRLLDRKLA--PNVYTYNTVMSALCKAGRLDQA 410
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
M + +C P +A L+ G
Sbjct: 411 HRLFGVMLASDCTPP----------------------------------NAITYRALIHG 436
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC LE A +LD K++C P+V Y T++ C++G ++EAF LLERM G D
Sbjct: 437 LCLKMELERAVLLLDAMAKRDCAPDVACYGTIVAAFCKQGRIDEAFELLERMPFAG---D 493
Query: 268 TVTFNILISGLRK 280
V F L+ L K
Sbjct: 494 KVMFRTLVRALCK 506
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 91/223 (40%), Gaps = 3/223 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIY-TSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P+V T+N V++ L A + ++ A +A L+ GLC LE A
Sbjct: 2 PNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAVL 61
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLC-EKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+LD + TY + C E+GN+ LL+ M G N + GL
Sbjct: 62 LLDAVYFKLSWLVPATYLIIRFKACHERGNLRATIELLKDMAENGSTLSIQDLNGCLRGL 121
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSAS-YQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
K G V+ ++ K S S Y ++ L KR + E++ M +
Sbjct: 122 CKAGNVDGALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREMESVGLEAD 181
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+Y +IH LC +V+ ++++M+ + VP ++ ++
Sbjct: 182 KDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVI 224
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG++ A+ L M C P + N+ +N+LV A + ++GV+ D
Sbjct: 174 AGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVT 233
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+KGLC + A ++ + C P+ +Y T+M LC++ V + LLERM
Sbjct: 234 YNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMS 293
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI D VT+N+LI GL K G +E + L +GK + Y ++ R
Sbjct: 294 DAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMA 353
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EAKE++G MI + P V+Y ++ G C ++ ++K M + G P
Sbjct: 354 EAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKP 404
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 150/303 (49%), Gaps = 11/303 (3%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD-AIE--DIMQRIKVEKLCRFSDGF 129
S + VL Q ++ P+ + + +N L A R D A+E + M+R+ V+ D
Sbjct: 179 SAMRVL-QLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVD-----PDVV 232
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN + A RI A+E + M C P ++ V++ L K ++Q +
Sbjct: 233 TYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERM 292
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ G+ D N+L+ GL ++G+ + A L E + + YS +H C G +
Sbjct: 293 SDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRM 352
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EA ++ M S+G D VT++ ++ G + G++++ K+++ M GC PN+ ++ +
Sbjct: 353 AEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTAL 412
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQQG 368
L GL + EA EL+ + E +PS ++Y ++HG + KL E D V++ M+Q+G
Sbjct: 413 LNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQ-MLQKG 471
Query: 369 FVP 371
F P
Sbjct: 472 FFP 474
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 146/317 (46%), Gaps = 38/317 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P++ Y ++I+ LA+ D ++ + ++ G+ V N GR+++A
Sbjct: 299 PDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLN--GRMAEAK 356
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E + +M S C P V T++ V++ + + + K G + + LL GL
Sbjct: 357 EIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGL 416
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G A+ +L++ ++ P+ TYS +MHG +G ++E+ ++ +M +G T
Sbjct: 417 CKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTT 476
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG------------LLD- 315
V N+LI L + K + +E+ + KGC+ N ++ V++G LLD
Sbjct: 477 VEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDD 536
Query: 316 ----------------------KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
K + EA LV +M+ + P+ V+Y+ +IH C +
Sbjct: 537 MYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGA 596
Query: 354 VEDVDWVLKKMV-QQGF 369
VED+ +L KM+ ++GF
Sbjct: 597 VEDLLNLLDKMLAKEGF 613
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 139/284 (48%), Gaps = 18/284 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P++ Y +++ L + KR ++++++R+ + F D YN++ I+G G +A
Sbjct: 264 PDKISYFTVMSFLCKEKRVADVQNLLERMSDAGI--FPDQVTYNML-IHGLAKHGHADEA 320
Query: 148 IETL-------FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ L F + +V +F L + + ++ GE+ G D
Sbjct: 321 LSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEM-------ISKGCRPDVVT 373
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ ++ G C G L+ A ++ K C+PN T++ L++GLC+ G EA+ LL + E
Sbjct: 374 YSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSE 433
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
E +T+++++ G R++GK++E ++ +M KG +P + +++ L ++++
Sbjct: 434 EEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPA 493
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+AK+ + + + + V++ +IHG Q +E +L M
Sbjct: 494 DAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDM 537
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
Y P V F+ +L LL +L+ + + + G+ L+ G L +
Sbjct: 122 YRHAPEV--FDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRS 179
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A VL K C P++ + ++ L G +++A ERM G+D D VT+N LI
Sbjct: 180 AMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIK 239
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
GL ++ + ++++ M GC P+ SY V+ L +KR + + L+ RM + P
Sbjct: 240 GLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFP 299
Query: 337 SFVSYKKLIHGL 348
V+Y LIHGL
Sbjct: 300 DQVTYNMLIHGL 311
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 70/139 (50%)
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
R ++ LM G + A +L+ M+ +G D N+ ++ L G++++ ++ E
Sbjct: 161 TRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAE 220
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
RM+ G P+ +Y ++ GL +R +A E++ M+ P +SY ++ LC +K
Sbjct: 221 RMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEK 280
Query: 353 LVEDVDWVLKKMVQQGFVP 371
V DV +L++M G P
Sbjct: 281 RVADVQNLLERMSDAGIFP 299
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G+ T F L+ + GK+ M++L+ M+ GC P+ + L+ R
Sbjct: 152 MIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGR 211
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A E RM + P V+Y LI GLC + + D ++ M+Q G +P
Sbjct: 212 IDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLP 264
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 120/247 (48%)
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
D F YN I + +A E L D P T+ ++N L +
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
++ A G++ D N L+KGLC G + A V++E ++ C P+++TY+ +++GLC
Sbjct: 348 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 407
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ GN+ +A ++ +G D TFN LI G K+ K++ ++L+ERM G P++
Sbjct: 408 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI 467
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y VL GL + E E MI + P+ ++Y LI C +E+ V+ KM
Sbjct: 468 TYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 527
Query: 365 VQQGFVP 371
Q+G P
Sbjct: 528 SQEGLHP 534
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 130/249 (52%), Gaps = 3/249 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + +A+E + + P + +N LV L + + +Q + A+ G D
Sbjct: 340 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ-VMNEMAEEGCHPDIQT 398
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI++ GLC+ GN+ A V+++ + P+V T++TL+ G C++ ++ A L+ERM
Sbjct: 399 YNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMW 458
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI DT+T+N +++GL K GKV E + + M KGC+PN +Y ++ +
Sbjct: 459 EYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKME 518
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA +++ +M E + P VS+ LI+G C +E + +K+ ++G+ + ++
Sbjct: 519 EASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 578
Query: 381 GCVTFGKDN 389
G + GK N
Sbjct: 579 GAFS-GKLN 586
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 144/335 (42%), Gaps = 37/335 (11%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P++ Y +IN L + ++ + + + D YN + + G I
Sbjct: 320 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI--KPDIVVYNSLVKGLCLQGLI 377
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLN-------------LLVSAKLYGEIQGIYT---- 187
A++ + +M C P ++T+N+V+N ++ A + G + ++T
Sbjct: 378 LHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL 437
Query: 188 -----------SAAKL-------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
SA +L G+ D N +L GLC+ G + E + C
Sbjct: 438 IDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGC 497
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
PN TY+ L+ C +EEA ++ +M EG+ D V+FN LI G + G +E
Sbjct: 498 HPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 557
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
L ++++ KG + ++ ++ K A+++ M+ + +Y+ LI G C
Sbjct: 558 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 617
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
V+ L +M+++GF+P M + ++ +T
Sbjct: 618 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 652
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
I+ Y AGR+ A++ M + C P+ +N +++ LV A + + +Y G
Sbjct: 58 IRAYAR-AGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAG 116
Query: 194 VEIDACCLNILLKGLC-------------------------------ENGNLEAAFYVLD 222
V D I L+ C +G+ A + D
Sbjct: 117 VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFD 176
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
+ + PN+ ++ ++H LC++G+V EA LL ++ G+ + T+NI I GL + G
Sbjct: 177 QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 236
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
++ E ++L++ M+ P+ +Y ++ GL K EA + RM+ + P +Y
Sbjct: 237 RLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 295
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+I G C +V++ +LK V +GFVP
Sbjct: 296 TIIDGYCKISMVQEATELLKDAVFKGFVP 324
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 140/302 (46%), Gaps = 4/302 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN A + +++ L KR D +E + KV + + F YN+ AGR+ +A+
Sbjct: 185 PNLAAFNKVLHALC--KRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV 242
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M +Y P V T+N ++ L + E G D N ++ G
Sbjct: 243 RLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGY 301
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ ++ A +L + + P+ TY +L++GLC +G+VE A L +++GI D
Sbjct: 302 CKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI 361
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +N L+ GL QG + ++++ M +GC+P+ +Y V+ GL +A ++
Sbjct: 362 VVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMND 421
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
I + P ++ LI G C + ++ ++++M + G P + ++ G GK
Sbjct: 422 AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK 481
Query: 388 DN 389
N
Sbjct: 482 VN 483
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%)
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A+ L M + C P T+N +++ + E + A G D L+
Sbjct: 274 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 333
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC G++E A + +E + +P++ Y++L+ GLC +G + A ++ M EG
Sbjct: 334 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 393
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D T+NI+I+GL K G + + ++ KG P+ ++ ++ G + + A +L
Sbjct: 394 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 453
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
V RM ++P ++Y +++GLC V +V+ ++M+ +G P
Sbjct: 454 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP 499
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 135/302 (44%), Gaps = 3/302 (0%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+ + V+N+ ++ + +P+ Y ++IN L + +M ++ D F +
Sbjct: 378 LHALQVMNEMAE-EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY--LPDVFTF 434
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + ++ A++ + M Y P T+N VLN L A E+ +
Sbjct: 435 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 494
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G + NIL++ C + +E A V+ + ++ P+ +++TL++G C G++E
Sbjct: 495 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 554
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A+ L +++E +G A TFN LI + + K+ + M KG +S +Y+ ++
Sbjct: 555 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 614
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G A + MI + PS ++ ++I+ L V ++ MV+ G VP
Sbjct: 615 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674
Query: 372 RM 373
+
Sbjct: 675 EV 676
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 122/268 (45%), Gaps = 2/268 (0%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
IS +V+ + K Y P+ + +I+ + + D+ +++R+ + D Y
Sbjct: 412 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA--PDTITY 469
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + AG++++ ET +M C P+ T+N+++ + E + ++
Sbjct: 470 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ 529
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ DA N L+ G C NG+LE A+ + + ++ T++TL+ K N+
Sbjct: 530 EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 589
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A + + M S+G AD+ T+ +LI G K V+ L M KG P+ +++ V+
Sbjct: 590 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 649
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFV 339
L R +A ++ M+ + P V
Sbjct: 650 SLTVNHRVFQAVGIIHIMVKIGVVPEVV 677
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 142/303 (46%), Gaps = 2/303 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q + K PN Y II L ++ + D E +++ + + + D Y +
Sbjct: 32 LIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGI--VPDTVVYTTLIDG 89
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
G I A + +M P + V+ L E ++ GVE D
Sbjct: 90 FCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPD 149
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
L+ G C++G +E AF + ++ + PNV TY+ L GLC+ G V+ A LL
Sbjct: 150 EVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLH 209
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M +G+ + T+N L++GL K G + + +KL+E M+ G YP++ ++ ++
Sbjct: 210 EMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTG 269
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+A EL+ M+ + P+ +++ L++G C ++ED + +L M+++G +P +
Sbjct: 270 EMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYN 329
Query: 378 EIV 380
++
Sbjct: 330 SLM 332
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 112/232 (48%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ G + K ++ + +M P++ T+N ++ LL + + + + G+ D
Sbjct: 22 LGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTV 81
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
L+ G C+ GN++AA+ + DE KQ P+ Y+ ++ GLC G + EA + +M
Sbjct: 82 VYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKM 141
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S G++ D VT+ LI G K G++E+ L +M G PN +Y + GL +
Sbjct: 142 FSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQV 201
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A EL+ M + + + +Y L++GLC + ++++M G P
Sbjct: 202 DTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYP 253
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 143/322 (44%), Gaps = 15/322 (4%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + T ++ F L + + + ++ K++ P+ YT +I L + + + +
Sbjct: 79 DTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIV-PDFIAYTAVICGLCRCGKMMEADKV 137
Query: 114 MQRIKVEKLCRFSDGF------FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
++ FS G + +I Y +G + KA M P+V T+
Sbjct: 138 FNKM-------FSRGVEPDEVTYTTLIDGYCK-SGEMEKAFSLHNQMVQSGLTPNVVTYT 189
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+ + L + G++++ C N L+ GLC++GN+ A +++E
Sbjct: 190 ALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVA 249
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
P+ T++TLM C+ G + +A LL M G+ +TFN+L++G G +E+G
Sbjct: 250 GMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDG 309
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+LL M KG PN+ +Y ++ + E+ M + P +Y LI G
Sbjct: 310 ERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKG 369
Query: 348 LCNQKLVEDVDWVLKKMVQQGF 369
C + +++ ++ K+M ++GF
Sbjct: 370 HCKARNMKEAWFLHKEMAEKGF 391
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 120/243 (49%), Gaps = 6/243 (2%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAA 217
P V +++ V+N L GE+Q + ++ G++ + N ++ LC++G ++ A
Sbjct: 8 PDVVSYSTVIN---GYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
VL E Q P+ Y+TL+ G C+ GN++ A+ L + ME + I D + + +I G
Sbjct: 65 ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L + GK+ E K+ +M +G P+ +Y ++ G +A L +M+ ++P+
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTE 397
V+Y L GLC V+ + +L +M +G + + +V + + R V + E
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244
Query: 398 TVD 400
++
Sbjct: 245 EME 247
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 128/283 (45%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +YT +I+ + A + ++ +++ D Y + G++ +A
Sbjct: 78 PDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRI--VPDFIAYTAVICGLCRCGKMMEAD 135
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M S P T+ +++ + + ++ + G+ + L GL
Sbjct: 136 KVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGL 195
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G ++ A +L E + + N+ TY++L++GLC+ GN+ +A L+E ME G+ DT
Sbjct: 196 CKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDT 255
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+TF L+ K G++ + +LL M +G P ++ ++ G + + L+
Sbjct: 256 ITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAW 315
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + + P+ +Y L+ C + + + K M +G +P
Sbjct: 316 MLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMP 358
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 14/263 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
PN YT + + L + + D +++ ++C G N+ Y ++ +G
Sbjct: 183 PNVVTYTALADGLCKLGQVDTANELLH-----EMC--GKGLQLNIC-TYNSLVNGLCKSG 234
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
I +A++ + +M +P TF +++ + + G++ N
Sbjct: 235 NIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFN 294
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+L+ G C +G LE +L ++ PN TY++LM C + N+ + + M +
Sbjct: 295 VLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR 354
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D+ T+NILI G K ++E L + M KG ++SY ++ G KK+ EA
Sbjct: 355 GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEA 414
Query: 323 KELVGRMICERMSPSFVSYKKLI 345
+EL M E M+ Y +
Sbjct: 415 RELFEEMRREGMAADAEIYNLFV 437
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 59/113 (52%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M+ G D V+++ +I+G G++++ +KL++ M+ KG PN +Y ++ L +
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A+ ++ MI + + P V Y LI G C ++ + +M +Q VP
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVP 113
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 98/238 (41%), Gaps = 37/238 (15%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N Y ++N L ++ +M+ ++V + + D + + G + KA E
Sbjct: 219 NICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGM--YPDTITFTTLMDAYCKTGEMVKAHE 276
Query: 150 TLFDMPSYNCWPSVKTFNLVLN----------------------LLVSAKLYGEIQG--- 184
L +M P+V TFN+++N ++ + Y +
Sbjct: 277 LLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYC 336
Query: 185 ----------IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
IY GV D+ NIL+KG C+ N++ A+++ E ++
Sbjct: 337 IRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTAS 396
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+Y++++ G +K + EA L E M EG+ AD +N+ + +G +E ++L +
Sbjct: 397 SYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCD 454
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 140/298 (46%), Gaps = 4/298 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K Y P+ Y I+ LA+ D E++ +++ V+ C +G Y+++ G +
Sbjct: 216 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKM-VDSGCA-PNGATYSIVLSGHCRVGNM 273
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
++ +E +M P V N V+++L AK + + +K+G D NIL
Sbjct: 274 ARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNIL 333
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GLC+ ++ A + C P++ +YS +++GLC+ V +A L +RM +
Sbjct: 334 LDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 393
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VTFNIL+ GL K GK++E LL+ M P+ + +++GL KR EA
Sbjct: 394 VPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVR 453
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG--FVPRMGMWREIV 380
L M+ + + + ++ GLC + + K MV+ F P + + +V
Sbjct: 454 LFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLV 511
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 143/288 (49%), Gaps = 4/288 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K ++P+ L +I+ L +AK+ D +++ + K+ D YN++ +
Sbjct: 286 KRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMS--KIGAVPDVVTYNILLDGLCKTNLV 343
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA E M C P + ++++VLN L + + ++ + + D NIL
Sbjct: 344 DKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNIL 403
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+ G L+ A +LD + N P+ T +TLMHGLC +EA L + M +G
Sbjct: 404 MDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGT 463
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCY-PNSASYQEVLYGLLDKKRFPEA 322
AD + NI+++GL ++GK+ + + + M K G + P+ +Y ++ L++ R +A
Sbjct: 464 VADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQA 523
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ +M +P +V+Y L++GL Q D + + M ++GF+
Sbjct: 524 VDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 571
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 2/232 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++++A+E + +M P V T+ ++++ L A E ++ + G +
Sbjct: 24 GKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAY 83
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC++ N+E A+ +L+E + EP+ TY+T++ GLC G V EA + M S
Sbjct: 84 NALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPS 143
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMK--GKGCYPNSASYQEVLYGLLDKKRF 319
G D V +N L+ L K+GKV E L + M + P+ +Y ++ G ++
Sbjct: 144 RGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKT 203
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA +L +I + P V+Y ++ GL + +++ + + KKMV G P
Sbjct: 204 DEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAP 255
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 140/312 (44%), Gaps = 32/312 (10%)
Query: 85 KDYNPNEALYTLIINKLAQAKR----FDAIEDIMQR----------IKVEKLCRFSDGFF 130
K + P+ Y+ II+ L + + + +E++ ++ I V++LCR
Sbjct: 4 KGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCR------ 57
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
AG++ +A E M C + +N ++N L + + A
Sbjct: 58 ----------AGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMA 107
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G E D N +L GLC G + A D P + P+V Y+ L+ L ++G V
Sbjct: 108 SKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVA 167
Query: 251 EAFGLLERME--SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
EA+GL + M+ + D +T+N LI G + K +E MKL + + KG P++ +Y
Sbjct: 168 EAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNS 227
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+L GL K EA+E+ +M+ +P+ +Y ++ G C + + ++M ++
Sbjct: 228 ILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKR 287
Query: 369 FVPRMGMWREIV 380
F P + + ++
Sbjct: 288 FSPDVLLCNAVI 299
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 90/175 (51%)
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
A+ G E D + ++ GLC+ G + A +++E ++ P+V TY+ ++ LC G V
Sbjct: 2 AEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKV 61
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+EA L +M G A+TV +N LI+GL K +E KLLE M KG P++ +Y +
Sbjct: 62 DEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTI 121
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
L GL + EAK+ M SP V+Y L+ L + V + + K M
Sbjct: 122 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM 176
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ +A++ D+ + P T+N +L L E + ++ G + +
Sbjct: 202 KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYS 261
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I+L G C GN+ + +E ++ P+V + ++ LC+ V++A +LE M
Sbjct: 262 IVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKI 321
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D VT+NIL+ GL K V++ +L M GC P+ SY VL GL + +A
Sbjct: 322 GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA 381
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ L RMI ++ P V++ L+ GLC +++ +L M + +P
Sbjct: 382 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLP 430
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 128/282 (45%), Gaps = 2/282 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +I+ + ++ D + + + + D YN I + + +A
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGY--MPDTVTYNSILLGLARKSNMDEAE 242
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M C P+ T+++VL+ +Y + D N ++ L
Sbjct: 243 EMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDML 302
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ ++ A VL+E K P+V TY+ L+ GLC+ V++A L M G D
Sbjct: 303 CKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 362
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V+++++++GL K KV + L +RM + P+ ++ ++ GL + EAK+L+
Sbjct: 363 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDV 422
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
M + P V+ L+HGLC K ++ + + MV++G V
Sbjct: 423 MSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTV 464
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M +G + D VT++ +ISGL K GKV E ++++E M KG P+ A+Y ++ L +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA EL +MI S + V+Y LI+GLC + +E +L++M +G+ P
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEP 113
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 81/216 (37%), Gaps = 39/216 (18%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y++++N L + + + R+ KL D +N++ AG++ +A
Sbjct: 360 PDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL--VPDVVTFNILMDGLCKAGKLDEAK 417
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L M +N P T +++ L K E ++ + G D NI+L GL
Sbjct: 418 DLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGL 477
Query: 209 CENGNLEAAFYVLDEFPKQN-------------------------------------CEP 231
C G L A K + C P
Sbjct: 478 CREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAP 537
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ Y+TLM+GL ++G +A L + M+ +G +D
Sbjct: 538 DYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 136/300 (45%), Gaps = 3/300 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + + +T ++ L KR DI+ R ++ +L + F YN++ R
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR-RMTQLGCIPNVFSYNILLKGLCDENR 177
Query: 144 ISKAIETLFDMP--SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+A+E L MP +C P V ++ V+N + G Y G+ +
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ LC+ ++ A VL K PN RTY++++HG C G +EA G L++M S
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G++ D VT+N L+ L K G+ E K+ + M +G P +Y +L G K E
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
L+ M+ + P+ + LI Q V+ V KM QQG P + ++G
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 120/269 (44%), Gaps = 12/269 (4%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG--- 142
D P+ YT +IN + D + G NV+ +A
Sbjct: 194 DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM-------LDRGILPNVVTYSSIIAALCK 246
Query: 143 --RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ KA+E L M P+ +T+N +++ S+ E G GVE D
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ LC+NG A + D K+ +P + TY TL+ G KG + E GLL+ M
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI + F+ILI KQGKV++ M + +M+ +G P++ +Y V+ L R
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLC 349
+A +MI ER+SP + Y LIH LC
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 23/329 (6%)
Query: 70 DPISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFD-AIEDI 113
D +S +V+N + K D + PN Y+ II L +A+ D A+E +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 114 MQRIK--VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+K V CR YN I +G+ +AI L M S P V T+N +++
Sbjct: 258 TSMVKNGVMPNCRT-----YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L E + ++ S K G++ + LL+G G L +LD + P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N +S L+ ++G V++A + +M +G++ DTVT+ +I L K G+VE+ M+
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E+M + P + Y +++ L ++ +AKEL+ M+ + + + +I C +
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V + + + MV+ G P + + ++
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLI 521
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 2/273 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +PN +++++I A+ + D + +++ + L D Y + +GR
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL--NPDTVTYGTVIGILCKSGR 424
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ M P +N +++ L + + + + G+ +D N
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C+ G + + + D + +P++ TYSTL+ G C G ++EA LL M S G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D VT+N LI+G K ++E+ + L M+ G P+ +Y +L GL +R AK
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
EL + +Y ++HGLC L ++
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDE 637
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 127/294 (43%), Gaps = 4/294 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P +Y +I+ L ++D ++++ + +C D F+N I GR+ ++
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL--DTIFFNSIIDSHCKEGRVIES 498
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E LFD M P + T++ +++ A E + S +G++ D N L+
Sbjct: 499 -EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+ +E A + E P++ TY+ ++ GL + A L + G
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T+NI++ GL K +E +++ + + + ++ ++ LL R EAK+L
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P +Y + L Q L+E++D + M + G M IV
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PN+ TY L+ C G ++ F L + +G D + F L+ GL + + M +
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 291 -LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE--RMSPSFVSYKKLIHG 347
L RM GC PN SY +L GL D+ R EA EL+ M + P VSY +I+G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ ++ +M+ +G +P + + I+ +
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAAL 244
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A+ +M S P + T+N++L L + + +Y + G +++ N
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I+L GLC+N + A + + + RT++ ++ L + G +EA L + +
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D T++++ L +QG +EE L M+ GC NS ++ LL + A
Sbjct: 684 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 112/232 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G A+ M P+V T+N +++ L +L E + G+ D
Sbjct: 215 GNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTY 274
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L G C G L A + E +N P+ T++ L+ GLC++G V EA + E M
Sbjct: 275 NTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTE 334
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G + + T+N L+ G +++E +K+L M GKGC PN +SY ++ G KR E
Sbjct: 335 KGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNE 394
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
AK L+ M + ++P V+Y L+ GLC + + K+M G +P +
Sbjct: 395 AKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDL 446
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 149/350 (42%), Gaps = 53/350 (15%)
Query: 66 SNLRDPISVISVLNQYSKRKDYNPNEAL--YTLIINKLAQAKRFDAIEDIMQRIKVEKLC 123
SN + IS+ L + + NP ++ + + +A+ K++ + LC
Sbjct: 69 SNTSNDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSS---------AVSLC 119
Query: 124 RFSD--GFFYNV--IKIYGNMAGRISK---AIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
D G +NV + + N R+S A+ + M P TFN ++N L +
Sbjct: 120 NQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNE 179
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV---------------- 220
E G++ G E + N ++ GLC+NGN A V
Sbjct: 180 GKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTY 239
Query: 221 -------------------LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L E + P+V TY+T++HG C G + EA L + M
Sbjct: 240 NTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVG 299
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ DTVTFNIL+ GL K+G V E + E M KG PN+ +Y ++ G + E
Sbjct: 300 RNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDE 359
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A +++G MI + +P+ SY LI+G C K + + +L +M ++ P
Sbjct: 360 AIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTP 409
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 143/319 (44%), Gaps = 39/319 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKA 147
PN Y II+ L + + + + + + + D YN I ++G + G++++A
Sbjct: 234 PNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIP--PDVVTYNTI-LHGFCSLGQLNEA 290
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE---------IDA 198
+M N P TFN++++ L + E + + + + G E +D
Sbjct: 291 TRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDG 350
Query: 199 CCL--------------------------NILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
CL NIL+ G C++ + A +L E ++N P+
Sbjct: 351 YCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPD 410
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TYSTLM GLC+ G EA L + M S G+ D + ++IL+ G K G ++E +KLL+
Sbjct: 411 TVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLK 470
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M + PN Y ++ G+ + AKEL ++ + + P +Y +I GL +
Sbjct: 471 EMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEG 530
Query: 353 LVEDVDWVLKKMVQQGFVP 371
L ++ +KM GF+P
Sbjct: 531 LSDEAYEFFRKMEDDGFLP 549
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+++A+E L +M P V T+N +L+ S E ++ V D NI
Sbjct: 252 VNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNI 311
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+ G + A V + ++ EPN TY+ LM G C ++EA +L M +G
Sbjct: 312 LVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKG 371
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ ++NILI+G K ++ E +LL M K P++ +Y ++ GL R EA
Sbjct: 372 CAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREAL 431
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L M + P ++Y L+ G C +++ +LK+M ++ P + ++ ++
Sbjct: 432 NLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILI 488
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 104/203 (51%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+++A L +M N P T++ ++ L E ++ G+ D +
Sbjct: 391 RMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYS 450
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
ILL G C++G+L+ A +L E ++ +PN+ Y+ L+ G+ G +E A L ++ ++
Sbjct: 451 ILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSAD 510
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI D T+N++I GL K+G +E + +M+ G P+S SY ++ G L + A
Sbjct: 511 GIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTA 570
Query: 323 KELVGRMICERMSPSFVSYKKLI 345
+L+ M+ +R S +++ L+
Sbjct: 571 IQLIDEMVGKRFSADSSTFQMLL 593
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 115/243 (47%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+ + YN + + ++ +AI+ L M C P++ ++N+++N +K E + +
Sbjct: 340 NAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLL 399
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ ++ + D + L++GLC+ G A + E P++ YS L+ G C+
Sbjct: 400 SEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKH 459
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G+++EA LL+ M I + + + ILI G+ GK+E +L ++ G P+ +Y
Sbjct: 460 GHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTY 519
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GLL + EA E +M + P SY +I G + ++ +MV
Sbjct: 520 NVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVG 579
Query: 367 QGF 369
+ F
Sbjct: 580 KRF 582
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 148/308 (48%), Gaps = 6/308 (1%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
+ S + +++ F N + P VL KR ++ N + L++ Q+ D+
Sbjct: 94 FTSLSALIESFVNTQKPSFAFGVLGLIMKR-GFHLNVYNFNLLLKGFCQSGDSHKAMDLF 152
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAG-RISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+K + C D YN + I G G R+ +A E +M C P+ TF+ +++
Sbjct: 153 CMMK--RNCLIPDCVSYNTV-INGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGF 209
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
E G+ K+G+E D + L+ G C G++E + +E ++N PNV
Sbjct: 210 CKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNV 269
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TYS LM+ LC+K +EA +L+ M + D V + +L GL K G+ + +K+L+
Sbjct: 270 VTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDL 329
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN-QK 352
M +G PN+ +Y ++ GL + R +A ++ M + P V+Y L+ GLC K
Sbjct: 330 MVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGK 389
Query: 353 LVEDVDWV 360
+ E VD +
Sbjct: 390 IDEAVDLL 397
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 186/418 (44%), Gaps = 37/418 (8%)
Query: 1 MILRSHFARNHRQSIIQSLSSASTITRKRTFALASPSASHQDSD-HHAYKLNHKDWLSPT 59
MIL+ F +H SI +L + + +++ SP+ S S HH + S +
Sbjct: 1 MILKRLFQFSHSISIPTTLRPFHSSSSSSSYSSLSPALSESLSHFHHTLQDYPNSIPSYS 60
Query: 60 EVLKIFSNLRDP------ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
+ NLR ISV S + S + AL +N + F + I
Sbjct: 61 SCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLI 120
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNM-------AGRISKAIETLFDMPSYNCW-PSVKT 165
M+R GF NV N+ +G KA++ LF M NC P +
Sbjct: 121 MKR-----------GFHLNVYNF--NLLLKGFCQSGDSHKAMD-LFCMMKRNCLIPDCVS 166
Query: 166 FNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP 225
+N V+N L K E + ++ + ++ + L+ G C+NG++E F +L+E
Sbjct: 167 YNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEME 226
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
K E +V YS L+ G C KG++E L M + + + VT++ L++ L K+ K +
Sbjct: 227 KMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWK 286
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
E ++L+ M G P+ +Y + GL R +A +++ M+ P+ V+Y +I
Sbjct: 287 EAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAII 346
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETVDSL 402
+GLC + V+D +L+ M ++G P + + +V G GK + E VD L
Sbjct: 347 NGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGK-------IDEAVDLL 397
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 133/300 (44%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K P+ Y+ ++ L + D D++ + ++ D F +N++ R
Sbjct: 367 KKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRR 426
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A + M ++ T+N++++ +SA + ++ A G+ +A +
Sbjct: 427 LRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTV 486
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+ L A + ++ P V Y+TLM LC + +VE+A L + M +
Sbjct: 487 LINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNAN 546
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D D V+FNI+I G K G VE +LL M P++ ++ ++ L + EA
Sbjct: 547 HDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAA 606
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
L RM+ P V + L+ G + E V +L++M + V + I+ C+
Sbjct: 607 SLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACL 666
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 47/272 (17%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IY 137
SK P+ + L+I +L + +R + + + VE+ GF N++ I
Sbjct: 402 SKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTM-VER------GFPSNIVTYNILID 454
Query: 138 GNM-AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G + AG+++KA+E D P+ T+ +++N L ++ +G++ G
Sbjct: 455 GYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRP 514
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE------ 250
N L+ LC ++E A + E N +P+V +++ ++ G + G+VE
Sbjct: 515 TVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELL 574
Query: 251 -----------------------------EAFGLLERMESEGIDADTVTFNILISGLRKQ 281
EA L ERM S G D V F+ L+ G +
Sbjct: 575 LEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLK 634
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
GK E+ + +L++M K +S +L L
Sbjct: 635 GKTEKVVSMLQQMADKDVVLDSKLTSTILACL 666
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 139/296 (46%), Gaps = 10/296 (3%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q K + PN +Y +I+ L + + +M + VE SD F +I Y
Sbjct: 255 LLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEM-VEP----SDVTFNVLISAY 309
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+ +A+ L S P V T V+ +L A E + +G +D
Sbjct: 310 CQEENLV-QALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVD 368
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+KG C G + VL + + C PNV TY+ L G C+ G ++ A L
Sbjct: 369 VVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFN 428
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK--GCYPNSASYQEVLYGLLD 315
M+++GI+ + +T++ LI GL G++E+G K+LE M+ G + Y ++YGL
Sbjct: 429 DMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYK 488
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K +F EA E + +M E++ P V I G CN+ + D V +M+++G VP
Sbjct: 489 KNQFEEALEFLTKM--EKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVP 542
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 161/387 (41%), Gaps = 50/387 (12%)
Query: 11 HRQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRD 70
H +I SAS + +A P+ H S + A L HK + R
Sbjct: 96 HIAHLILEQKSASQALQTFRWASNLPNFIHNQSTYRA--LIHK-----------LCSFRR 142
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQA----------------------KRFD 108
+V VL++ P+E+++ I+ L +A K F+
Sbjct: 143 FETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFN 202
Query: 109 AIEDIMQRIKVEKLCRF-----------SDGFFYNVIKIYGNMAGRISKAIETLFDMPSY 157
+I D++ + ++ F D + + ++ + RI A + L M S
Sbjct: 203 SILDVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSR 262
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
P+ +N +++ L G + + VE N+L+ C+ NL A
Sbjct: 263 GKTPNTVIYNTMIHALCKNGKVGRARSLMNEM----VEPSDVTFNVLISAYCQEENLVQA 318
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+L++ P+V T + ++ LC+ G V E +LER+ES G D V +N LI G
Sbjct: 319 LVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKG 378
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
GK + G ++L+ M+ KGC PN +Y + G D A +L M + ++ +
Sbjct: 379 FCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWN 438
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKM 364
F++Y LI GLC+ +ED +L+ M
Sbjct: 439 FMTYDTLIRGLCSGGRMEDGFKILELM 465
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%)
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C G++ A V D+ K+ P+V Y L+HG C+ GNV EAF L+ M G
Sbjct: 518 GFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFP 577
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
TFN LIS QGKV +KL+E M G+GC P+ SY ++ L +K F +A L
Sbjct: 578 TAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLF 637
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+M+ + + P + ++ ++ L + + + D + +Q G
Sbjct: 638 LQMVEKDILPDYSTWNSMLLCLTQETVWLEGDNLFHLQLQDG 679
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 6/216 (2%)
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC-EKGN 248
+ +G D +++GL + VLD K P+++ +++++ L E +
Sbjct: 155 SSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDID 214
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ F ++M G+ D TF IL+ GL ++ + KLL+ MK +G PN+ Y
Sbjct: 215 LAREF-YRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNT 273
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+++ L + A+ L+ M+ PS V++ LI C ++ + +L+K G
Sbjct: 274 MIHALCKNGKVGRARSLMNEMV----EPSDVTFNVLISAYCQEENLVQALVLLEKSFSMG 329
Query: 369 FVPRMGMWREIVGCVTFGKDNRNRVYVTETVDSLAS 404
FVP + ++VG + V V E V+S+
Sbjct: 330 FVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGG 365
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%)
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A N L+ C G + +A ++++ + C P++ +YS ++ LC KG+ ++A L
Sbjct: 579 APTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFL 638
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
+M + I D T+N ++ L ++ EG L G Y
Sbjct: 639 QMVEKDILPDYSTWNSMLLCLTQETVWLEGDNLFHLQLQDGKY 681
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESE-GIDADTVTFNILISGLRKQGKVEEGMKL 290
N TY L+H LC E +L+ M S G D F ++ GL + V + +K+
Sbjct: 126 NQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKV 185
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV-GRMICERMSPSFVSYKKLIHGLC 349
L+ + G P+ + +L +L K+ A+E +M+ +S ++ L+ GLC
Sbjct: 186 LDLITKFGENPSLKIFNSIL-DVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLC 244
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV-TFGKDNRNRVYVTETVD 400
+ D +L+ M +G P ++ ++ + GK R R + E V+
Sbjct: 245 LTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE 296
>gi|413950866|gb|AFW83515.1| hypothetical protein ZEAMMB73_465290 [Zea mays]
Length = 478
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 145/325 (44%), Gaps = 26/325 (8%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG----- 142
P+ A +L+ ++LA A ++ R S G F +V + G
Sbjct: 53 TPSLATVSLLTSRLASAGHLPLATSLLSR---------SRGVFPSVAALEPPFLGLLRAF 103
Query: 143 ----RISKAIETLFDMPSYNCWP-SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
R A+ PS P S +++N VL LV+ + + G
Sbjct: 104 SRTHRPLAALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPT 163
Query: 198 ACCLNILLKGLCENG--NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
A N+LLK C + ++E A + PK P+V +Y+T++ GLC +G + EA +
Sbjct: 164 AATYNVLLKAHCSDAAAHIEDALRLFRNIPK----PDVCSYNTIIDGLCRRGRLAEALDM 219
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
M + I VT+ +I L ++G ++ +K+ M +G PN +Y ++ GL
Sbjct: 220 FSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCK 279
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
R A EL+ RMI E+ P+ ++Y +I GLC + ++ + +L +M QG P G+
Sbjct: 280 GGRATSALELLDRMIKEKKLPNMITYSSVIDGLCKEHMLSEAMEILDRMRLQGRKPDAGL 339
Query: 376 W-REIVGCVTFGKDNRNRVYVTETV 399
+ + IVG G+ Y+ E V
Sbjct: 340 FGKLIVGLCDAGRAVEAANYLDEMV 364
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 114/250 (45%), Gaps = 10/250 (4%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN + + A L DM + P+ T+N++L S + A
Sbjct: 132 YNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVLLKAHCS-----DAAAHIEDAL 186
Query: 191 KLGVEI---DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+L I D C N ++ GLC G L A + E + P V TY+T++H L +G
Sbjct: 187 RLFRNIPKPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREG 246
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++A + M G+ + VT++ LI GL K G+ ++LL+RM + PN +Y
Sbjct: 247 CFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMIKEKKLPNMITYS 306
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQ 366
V+ GL + EA E++ RM + P + KLI GLC+ + VE ++ L +MV
Sbjct: 307 SVIDGLCKEHMLSEAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANY-LDEMVL 365
Query: 367 QGFVPRMGMW 376
G P W
Sbjct: 366 AGIEPNRVTW 375
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 128/301 (42%), Gaps = 12/301 (3%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P A Y N L +A DA I +++ + D YN I GR+++
Sbjct: 160 FAPTAATY----NVLLKAHCSDAAAHIEDALRLFRNIPKPDVCSYNTIIDGLCRRGRLAE 215
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A++ +M P+V T+ V++ L + + I+ + GV + + L+
Sbjct: 216 ALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLID 275
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ G +A +LD K+ PN+ TYS+++ GLC++ + EA +L+RM +G
Sbjct: 276 GLCKGGRATSALELLDRMIKEKKLPNMITYSSVIDGLCKEHMLSEAMEILDRMRLQGRKP 335
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ-------EVLYGLLDKKRF 319
D F LI GL G+ E L+ M G PN ++ VL L DK
Sbjct: 336 DAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNRVTWSLHARINNTVLTALCDKGEL 395
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A ++ +S ++ L+ +E V+ M+ + +P W I
Sbjct: 396 GRAFQVYQSTRTRSISTDPTTFHLLVESFSKNN-IEKAARVVLDMLSERCIPERETWDVI 454
Query: 380 V 380
+
Sbjct: 455 I 455
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 25/252 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
P YT +I+ LA+ FD I + G N++ Y ++ G
Sbjct: 230 PTVVTYTTVIHWLAREGCFDDALKIFHEMGRR-------GVSPNLVT-YSSLIDGLCKGG 281
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R + A+E L M P++ T++ V++ L + E I G + DA
Sbjct: 282 RATSALELLDRMIKEKKLPNMITYSSVIDGLCKEHMLSEAMEILDRMRLQGRKPDAGLFG 341
Query: 203 ILLKGLCENGN-LEAAFYVLDEFPKQNCEPNVRTYS-------TLMHGLCEKGNVEEAFG 254
L+ GLC+ G +EAA Y LDE EPN T+S T++ LC+KG + AF
Sbjct: 342 KLIVGLCDAGRAVEAANY-LDEMVLAGIEPNRVTWSLHARINNTVLTALCDKGELGRAFQ 400
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ + + I D TF++L+ K +E+ +++ M + C P ++ ++ G
Sbjct: 401 VYQSTRTRSISTDPTTFHLLVESFSKN-NIEKAARVVLDMLSERCIPERETWDVIISGYW 459
Query: 315 DKKRF-PEAKEL 325
KK+ EAKE+
Sbjct: 460 SKKKVRQEAKEI 471
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 35/243 (14%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG++ +A+E M C+P+V+T+
Sbjct: 268 AGKLHEALEFWARMREDGCFPTVRTYT--------------------------------- 294
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+L+ LCE+G A + E ++ CEPNV TY+ L+ LC++G ++EA +L M
Sbjct: 295 --VLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMV 352
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G+ V FN LI K+G +E+ + +L M+ K PN +Y E++ G K
Sbjct: 353 EKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMD 412
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A L+ +M+ ++SP V+Y LIHGLC +V+ + + M++ GF P + +
Sbjct: 413 RAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFM 472
Query: 381 GCV 383
C+
Sbjct: 473 VCL 475
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 150/323 (46%), Gaps = 37/323 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ + PN YT++I+ L + R D ++ + VEK S F +I Y G
Sbjct: 317 RERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEM-VEKGVAPSVVPFNALIGSYCK-RG 374
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN----------------LVLNLLVSAKLYGEIQ--- 183
+ A+ L M S P+V+T+N +LN +V +KL ++
Sbjct: 375 MMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYN 434
Query: 184 ---------GIYTSAAKL-------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
G+ SA++L G D N + LC G + A +L+ ++
Sbjct: 435 TLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEK 494
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
+ + N Y+ L+ G C+ G +E A L +RM +E +++TFN++I GLRK+GKV++
Sbjct: 495 HVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDA 554
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
M L+E M P +Y ++ +L + F A E++ R+I P+ V+Y I
Sbjct: 555 MLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKA 614
Query: 348 LCNQKLVEDVDWVLKKMVQQGFV 370
C+Q +E+ + ++ K+ +G +
Sbjct: 615 YCSQGRLEEAEEMVIKIKNEGVL 637
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P YT+++ L ++ R + ++ E+ C + + Y V+ Y GR+ +A+
Sbjct: 288 PTVRTYTVLVCALCESGRELEALSLFGEMR-ERGCE-PNVYTYTVLIDYLCKEGRMDEAL 345
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M PSV FN ++ + + G+ V + N L+ G
Sbjct: 346 KMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGF 405
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +++ A +L++ + P+V TY+TL+HGLCE G V+ A L M +G D
Sbjct: 406 CRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQ 465
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
TFN + L + G+V E ++LE +K K N +Y ++ G + A L R
Sbjct: 466 WTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKR 525
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ E P+ +++ +I GL + V+D +++ M + P + + +V
Sbjct: 526 MLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILV 577
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 125/287 (43%), Gaps = 12/287 (4%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-----YNVIKIYGNMAGRI 144
N YT +I+ L +A + + R++ DG F Y V+ +GR
Sbjct: 254 NAVSYTNLIHGLCEAGKLHEALEFWARMR-------EDGCFPTVRTYTVLVCALCESGRE 306
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ +M C P+V T+ ++++ L E + + GV N L
Sbjct: 307 LEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNAL 366
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ C+ G +E A VL + PNVRTY+ L+ G C +++ A LL +M +
Sbjct: 367 IGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKL 426
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VT+N LI GL + G V+ +L M G P+ ++ + L R EA +
Sbjct: 427 SPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQ 486
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ + + + + +Y LI G C +E + K+M+ + +P
Sbjct: 487 ILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLP 533
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 10/283 (3%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRIS 145
Y PN YT I R + E+++ +IK E + D F YN+ I YG M G +
Sbjct: 601 YQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGV--LLDSFIYNLLINAYGCM-GLLD 657
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A L M C PS T+++++ LV K E + +G+++ +++
Sbjct: 658 SAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKE------GSNPVGLDVSLTNISVDN 711
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
+ + + ++ + C PN+ TYS L++GLC+ G + AF L M GI
Sbjct: 712 TDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGIS 771
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ N L+S K G E + LL+ M + SY+ ++ GL ++ +A+ +
Sbjct: 772 PSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAV 831
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ + V++K LI GL V+ +L M + G
Sbjct: 832 FCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNG 874
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 140/317 (44%), Gaps = 31/317 (9%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R ++P++ + + L + R I++ +K EK + ++ + +I Y AG+
Sbjct: 458 RDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLK-EKHVKANEHAYTALIDGYCK-AGK 515
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I A M + C P+ TFN++++ L + + AK V+ NI
Sbjct: 516 IEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNI 575
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++ + + + + A +L+ +PNV TY+ + C +G +EEA ++ ++++EG
Sbjct: 576 LVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEG 635
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D+ +N+LI+ G ++ +L RM G GC P+ +Y ++ L+ +K E
Sbjct: 636 VLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGS 695
Query: 324 ELVG------------------------RMICERMS-----PSFVSYKKLIHGLCNQKLV 354
VG ++ E+M+ P+ +Y KLI+GLC +
Sbjct: 696 NPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRL 755
Query: 355 EDVDWVLKKMVQQGFVP 371
+ M + G P
Sbjct: 756 NVAFSLYHHMREGGISP 772
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 131/305 (42%), Gaps = 8/305 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
+ D + V+ ++ + K PN Y +I + K D ++ ++ KL D
Sbjct: 376 MEDAVGVLGLM----ESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLS--PD 429
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIY 186
YN + I+G + + LF + + + P TFN + L GE I
Sbjct: 430 VVTYNTL-IHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQIL 488
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S + V+ + L+ G C+ G +E A + + C PN T++ ++ GL ++
Sbjct: 489 ESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKE 548
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G V++A L+E M + T+NIL+ + K+ + ++L R+ G PN +Y
Sbjct: 549 GKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTY 608
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+ + R EA+E+V ++ E + Y LI+ L++ VL++M
Sbjct: 609 TAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFG 668
Query: 367 QGFVP 371
G P
Sbjct: 669 TGCEP 673
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 144/350 (41%), Gaps = 54/350 (15%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K NE YT +I+ +A + + + +R+ E+ + +NV+ G
Sbjct: 492 KEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEEC--LPNSITFNVMIDGLRKEG 549
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNL----------------VLNLLVSAK------LYG 180
++ A+ + DM ++ P++ T+N+ +LN L+S+ Y
Sbjct: 550 KVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYT 609
Query: 181 EIQGIYTSAAKL-------------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
Y S +L GV +D+ N+L+ G L++AF VL
Sbjct: 610 AFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGT 669
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG---IDADTVTFNILISGLRKQGKV 284
CEP+ TYS LM L ++E+ + EG + D NI + K+
Sbjct: 670 GCEPSYLTYSILMKHL-----------VIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKI 718
Query: 285 EEGMK--LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+ G+ L E+M GC PN +Y +++ GL R A L M +SPS + +
Sbjct: 719 DFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHN 778
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
L+ C + + +L M++ + + ++ ++ C F + N+ +
Sbjct: 779 SLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLI-CGLFEQMNKEK 827
>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
Length = 649
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 150/320 (46%), Gaps = 40/320 (12%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK +PNEA ++++I+ L Q D+ ++++ ++EK D YN+I + GR
Sbjct: 320 RKGCSPNEATFSMLISSLCQNNLVDSAVEVLE--QMEKYGCEPDTVNYNIIINSLSERGR 377
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ L M C P FN VL A+ + + + + + NI
Sbjct: 378 VDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNI 434
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM---- 259
L+ LC+NG + A V ++ P+ C P++ TYS+L++G E+G VE A L M
Sbjct: 435 LIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKP 494
Query: 260 --------------------------ESEGIDA--DTVTFNILISGLRKQGKVEEGMKLL 291
E G D + VTFNILI+ L ++G V+ +++L
Sbjct: 495 DIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVL 554
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E+M G P+ +Y ++ G ++ R +A +L+ M C+ P +SY + GLC
Sbjct: 555 EQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRA 611
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
+ +D + ++ +M++ P
Sbjct: 612 ERWQDAEELVAEMLRNKCTP 631
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 135/261 (51%), Gaps = 10/261 (3%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ + ++ +A+R+ DA E I Q + + C + F +I + G ++ A
Sbjct: 392 PDALGFNAVLKGFCRAERWHDASELIAQMFRDD--CPLIEMTFNILIDMLCQ-NGLVNYA 448
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ MP Y C P + T++ +LN L ++ S + + D N +LKG
Sbjct: 449 TQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRS---MPCKPDIFSYNAVLKG 505
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC E A ++ E ++C PN T++ L++ LC+KG V+ A +LE+M + G D
Sbjct: 506 LCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 565
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+N LI+G +QG++++ +KLL M C P++ SY L GL +R+ +A+ELV
Sbjct: 566 IFTYNALINGFSEQGRLDDALKLLSTMS---CKPDAISYNSTLKGLCRAERWQDAEELVA 622
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M+ + +P+ V++K H L
Sbjct: 623 EMLRNKCTPNEVTFKYANHLL 643
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 137/294 (46%), Gaps = 12/294 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK--IYGNMAGRISK 146
PN Y + L A+R++ I ++M + V K C ++ F +I N+ +
Sbjct: 290 PNTVCYNAALKGLCIAERWEDIGELMAEM-VRKGCSPNEATFSMLISSLCQNNL---VDS 345
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+E L M Y C P +N+++N L G + + + DA N +LK
Sbjct: 346 AVEVLEQMEKYGCEPDTVNYNIIINSLSE---RGRVDDALRLLNSMVCKPDALGFNAVLK 402
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C A ++ + + +C T++ L+ LC+ G V A + E+M
Sbjct: 403 GFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTP 462
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D VT++ L++G +QG VE ++L M C P+ SY VL GL R+ +A EL+
Sbjct: 463 DIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELI 519
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + P+ V++ LI+ LC + LV+ VL++M G P + + ++
Sbjct: 520 AEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 573
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 135/283 (47%), Gaps = 8/283 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L AK+++ E + + C ++ F I+ + G + +A+
Sbjct: 188 PDTYTYNTVLKGLCIAKKWEEAE-ELMAEMIRNRCPPNEVTFATQIRSFCQ-NGLLDRAV 245
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L MP Y C P V ++ ++N G + + + + C N LKGL
Sbjct: 246 QLLDQMPRYGCTPDVVIYSTLINGFSEQ---GHVDQALDLLNTMLCKPNTVCYNAALKGL 302
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C E ++ E ++ C PN T+S L+ LC+ V+ A +LE+ME G + DT
Sbjct: 303 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 362
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +NI+I+ L ++G+V++ ++LL M C P++ + VL G +R+ +A EL+ +
Sbjct: 363 VNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQ 419
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + +++ LI LC LV V ++M + P
Sbjct: 420 MFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTP 462
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
A + V D N +LKGLC E A ++ E + C PN T++T + C+ G +
Sbjct: 182 ASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLL 241
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+ A LL++M G D V ++ LI+G +QG V++ + LL M C PN+ Y
Sbjct: 242 DRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAA 298
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L GL +R+ + EL+ M+ + SP+ ++ LI LC LV+ VL++M + G
Sbjct: 299 LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGC 358
Query: 370 VP 371
P
Sbjct: 359 EP 360
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 5/179 (2%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+K LC L A VLD V +++TL+ G C G + +A +L +
Sbjct: 94 NILIKKLCATRRLADAERVLDALKAAAAADAV-SHNTLVAGYCRDGRLADAERVLGAARA 152
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G A+ VT+ LI G + G++++ ++L+ M P++ +Y VL GL K++ E
Sbjct: 153 TGA-ANVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEE 208
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A+EL+ MI R P+ V++ I C L++ +L +M + G P + ++ ++
Sbjct: 209 AEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLI 267
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 117/220 (53%), Gaps = 2/220 (0%)
Query: 131 YNVIKIYGN-MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+N++ IYG + + A+E L M YNC P T+N +L+ L G+ + +
Sbjct: 211 FNIV-IYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDM 269
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G+ + NIL+ G C+ G L+ A V++ + N P+V TY+ L++GLC +G +
Sbjct: 270 KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRI 329
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EEAF L + ME+ + D V++N LI+G + K+ E KLLE M KG PN+ ++ +
Sbjct: 330 EEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIM 389
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+ + + +A + +M SP V+Y LI+G C
Sbjct: 390 VKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 140/305 (45%), Gaps = 8/305 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L++ +VI ++ Q + P+ Y ++IN L R + E R ++E L D
Sbjct: 294 LKEAANVIELMTQ----NNLLPDVWTYNMLINGLCNEGRIE--EAFKLRDEMENLKLLPD 347
Query: 128 GFFYNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
YN + I G + +IS+A + L +M P+ T N+++ +
Sbjct: 348 VVSYNTL-INGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI 406
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
T + G D N L+ G C+ GN+ AF +DE ++N + + T +T++ LC +
Sbjct: 407 TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+EEA+ LL G D V++ LI G K G V+ +KL + MK K P++ +Y
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL + +A + ++ + P +Y ++HG C + VE KMV+
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 367 QGFVP 371
F P
Sbjct: 587 NSFKP 591
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 132/280 (47%), Gaps = 10/280 (3%)
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM 154
+L++ +A +R D + + +L S I Y +G+ A + M
Sbjct: 109 SLLLGFIATDRRHDL------HLSILRLTSPSKALLDTAIGAYVQ-SGQPHHAFQIFKKM 161
Query: 155 PSYNCWPSVKTFNLVLNLLV---SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
P++ T N +LN LV S+ + + A KLG+ + NI++ G C
Sbjct: 162 KRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLE 221
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
+ A L+ K NC P+ TY+T++ LC+KG + +A LL M+S G+ + T+
Sbjct: 222 NKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTY 281
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
NIL+ G K G ++E ++E M P+ +Y ++ GL ++ R EA +L M
Sbjct: 282 NILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMEN 341
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ P VSY LI+G + + +L++M ++G P
Sbjct: 342 LKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKP 381
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 9/225 (4%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V TFN+V+ + + K D N +L LC+ G L A +
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDL 265
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + + PN TY+ L++G C+ G ++EA ++E M + D T+N+LI+GL
Sbjct: 266 LMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN 325
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G++EE KL + M+ P+ SY ++ G L+ + EA +L+ M + + P+ V+
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVT 385
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
+ ++ C + ++D + KM + GF P CVT+
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSP---------DCVTY 421
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 148/349 (42%), Gaps = 43/349 (12%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
+D + ++V+ +Y + +P+ Y I++ L + R D++ +K L +
Sbjct: 224 FKDAVEFLNVMGKY----NCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGL--LPN 277
Query: 128 GFFYNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
YN++ +YG G + +A + M N P V T+N+++N L + E +
Sbjct: 278 RNTYNIL-VYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLR 336
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
L + D N L+ G E + AF +L+E ++ +PN T++ ++ C++
Sbjct: 337 DEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKE 396
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG------------------------ 282
G +++A + +ME G D VT+N LI+G K G
Sbjct: 397 GKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTL 456
Query: 283 -----------KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
K+EE KLL + +G + + SY ++ G A +L M
Sbjct: 457 NTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE 516
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + PS V+Y +I GLC E L ++++ G +P + I+
Sbjct: 517 KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTIL 565
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 37/322 (11%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN + +++ + + D + + K+E+ D YN + AG +
Sbjct: 377 KGVKPNAVTHNIMVKWYCKEGKMDDASNTIT--KMEESGFSPDCVTYNTLINGYCKAGNM 434
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID------- 197
+A T+ +M N T N +L L K E + +SA K G ID
Sbjct: 435 GEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTL 494
Query: 198 ----------------------------ACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
N ++ GLC+ G E A L+E +
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
P+ TY+T++HG C +G+VE+AF +M D T NIL+ GL +G +E+ +K
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALK 614
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
L KG ++ +Y ++ L + R +A L+ M + + P +Y +I L
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
+ + + + + KM+++G +P
Sbjct: 675 DSGRIREAEEFMSKMLEKGNLP 696
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 2/247 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK+ + I+ L + K+ + ++ + K F D Y + + G
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR--KRGYFIDEVSYGTLIVGYFKDGN 503
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A++ +M PS T+N ++ L + + G+ D N
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L G C G++E AF ++ + + +P+V T + L+ GLC +G +E+A L S+G
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKG 623
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
DTVT+N LI+ L K+G++++ LL M+ K P+ +Y ++ L D R EA+
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE 683
Query: 324 ELVGRMI 330
E + +M+
Sbjct: 684 EFMSKML 690
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PNV T++ +++G C + ++A L M D VT+N ++ L K+G++ + L
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDL 265
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L MK +G PN +Y ++YG EA ++ M + P +Y LI+GLCN
Sbjct: 266 LMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN 325
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
+ +E+ + +M +P + + ++ GC+ + K
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 27/260 (10%)
Query: 83 KRKDYNPNEALYTLIINKLAQ-AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K K+ P+ Y II L Q K AI + + ++ L D YN I
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLL---PDETTYNTILHGYCRE 571
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + KA + M + P V T N++L L + + ++ + G ID
Sbjct: 572 GDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTY 631
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ LC+ G L+ AF +L E ++ P+ TY+ ++ L + G + EA + +M
Sbjct: 632 NTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLE 691
Query: 262 EGIDAD-----------------------TVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
+G D +V ++ I L +GK ++ M++ K KG
Sbjct: 692 KGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKG 751
Query: 299 CYPNSASYQEVLYGLLDKKR 318
+ ++Y ++ GL+ +++
Sbjct: 752 ITVDKSTYINLMDGLIKRRK 771
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 150/335 (44%), Gaps = 22/335 (6%)
Query: 51 NHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKR---------------KDYNPNEALYT 95
N K +LS E +F D ++ +++N Y ++ K P Y
Sbjct: 272 NTKSFLSDMEEKGVFP---DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 328
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD-M 154
IIN L + ++ + ++ + K+ D YN++ + + A E +FD M
Sbjct: 329 AIINGLCKTGKYLRAKGVLDEML--KIGMSPDTATYNILLVECCRNDNMMDA-ERIFDEM 385
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
PS P + +F+ ++ LL + + G+ D IL+ G C NG +
Sbjct: 386 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 445
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
A V DE +Q C +V TY+T+++GLC++ + EA L M G+ D TF L
Sbjct: 446 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 505
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I+G K G + + + L E M + P+ +Y ++ G + EL MI R+
Sbjct: 506 INGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 565
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
P+ +SY LI+G CN V + + +MV++GF
Sbjct: 566 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGF 600
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 135/290 (46%), Gaps = 4/290 (1%)
Query: 93 LYTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET 150
+YTL +IN L + ++ + + + +E+ F D YN + G + +A E
Sbjct: 254 VYTLNIMINALCKNQKIENTKSFLS--DMEEKGVFPDVVTYNTLINAYCRQGLLEEAFEL 311
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
+ M P V T+N ++N L Y +G+ K+G+ D NILL C
Sbjct: 312 MDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCR 371
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
N N+ A + DE P Q P++ ++S L+ L + G +++A M++ G+ D V
Sbjct: 372 NDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 431
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ ILI G + G + E +K+ + M +GC + +Y +L GL +K EA EL M
Sbjct: 432 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMT 491
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P F ++ LI+G + + + M+Q+ P + + ++
Sbjct: 492 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLI 541
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 135/279 (48%), Gaps = 4/279 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y I+N L + K +++ + + F D + + + + G ++KA+ TLF+
Sbjct: 467 YNTILNGLCKEKMLSEADELFTEMTERGV--FPDFYTFTTLINGYSKDGNMNKAV-TLFE 523
Query: 154 MP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M N P V T+N +++ ++ ++ + + IL+ G C G
Sbjct: 524 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG 583
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+ AF + DE ++ E + T +T++ G C GN +A L M +GI D +T+N
Sbjct: 584 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 643
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
LI+G K+ ++ L+ +M+ G P+ +Y +L G + R EA+ ++ +MI
Sbjct: 644 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 703
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++P +Y LI+G Q +++ V +M+Q+GFVP
Sbjct: 704 GVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 4/229 (1%)
Query: 158 NCWPSVKTFNLVLNLLVSA-KLYGEIQGIYTSAAK-LGVEIDACCLNILLKGLCENGNLE 215
NC + F+L++ V A KL + +K L V I+AC N LL GL + G ++
Sbjct: 179 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINAC--NSLLGGLVKVGWVD 236
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A+ + E + + NV T + +++ LC+ +E L ME +G+ D VT+N LI
Sbjct: 237 LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 296
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+ +QG +EE +L++ M GKG P +Y ++ GL ++ AK ++ M+ MS
Sbjct: 297 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 356
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
P +Y L+ C + D + + +M QG VP + + ++G ++
Sbjct: 357 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLS 405
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 122/274 (44%), Gaps = 35/274 (12%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +S+A++ +M C V T+N +LN L K+ E ++T + GV D
Sbjct: 443 GVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 502
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK--------------- 246
L+ G ++GN+ A + + ++N +P+V TY+TL+ G C+
Sbjct: 503 TTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS 562
Query: 247 --------------------GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
G V EAF L + M +G +A +T N ++ G + G +
Sbjct: 563 RRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK 622
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+ L M KG P+ +Y ++ G + ++ A LV +M + P ++Y +++
Sbjct: 623 ADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILN 682
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
G Q +++ + ++ KM+++G P + ++
Sbjct: 683 GFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 716
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A ++ + E + S S+ N +L LV IY + GV+++
Sbjct: 197 ARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYT 256
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
LNI++ LC+N +E L + ++ P+V TY+TL++ C +G +EEAF L++ M
Sbjct: 257 LNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 316
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G+ T+N +I+GL K GK +L+ M G P++A+Y +L
Sbjct: 317 GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMM 376
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A+ + M + + P VS+ LI L ++ + M G P ++ ++
Sbjct: 377 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 436
Query: 381 G 381
G
Sbjct: 437 G 437
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 101/220 (45%), Gaps = 4/220 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAG 142
+++ P+ Y +I+ + + + ++ + ++ + + Y + I Y NM G
Sbjct: 527 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI--YPNHISYGILINGYCNM-G 583
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+S+A +M ++ T N ++ A + ++ G+ D N
Sbjct: 584 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 643
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G + N++ AF ++++ P+V TY+ +++G +G ++EA ++ +M
Sbjct: 644 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 703
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
G++ D T+ LI+G Q ++E ++ + M +G P+
Sbjct: 704 GVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
>gi|226492629|ref|NP_001143148.1| uncharacterized protein LOC100275629 [Zea mays]
gi|195615066|gb|ACG29363.1| hypothetical protein [Zea mays]
Length = 478
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 145/325 (44%), Gaps = 26/325 (8%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG----- 142
P+ A +L+ ++LA A ++ R S G F +V + G
Sbjct: 53 TPSPATVSLLTSRLASAGHLPLATSLLSR---------SRGVFPSVAALEPPFLGLLRAF 103
Query: 143 ----RISKAIETLFDMPSYNCWP-SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
R A+ PS P S +++N VL LV+ + + G
Sbjct: 104 SRTHRPLAALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPT 163
Query: 198 ACCLNILLKGLCENG--NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
A N+LLK C + ++E A + PK P+V +Y+T++ GLC +G + EA +
Sbjct: 164 AATYNVLLKAHCSDAAAHIEDALRLFRNIPK----PDVCSYNTIIDGLCRRGRLAEALDM 219
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
M + I VT+ +I L ++G ++ +K+ M +G PN +Y ++ GL
Sbjct: 220 FSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCK 279
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
R A EL+ RM+ E+ P+ ++Y +I GLC + ++ + VL +M QG P G+
Sbjct: 280 GGRATSALELLDRMVKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGL 339
Query: 376 W-REIVGCVTFGKDNRNRVYVTETV 399
+ + IVG G+ Y+ E V
Sbjct: 340 FGKLIVGLCDAGRAVEAANYLDEMV 364
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 10/250 (4%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN + + A L DM + P+ T+N++L S + A
Sbjct: 132 YNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVLLKAHCS-----DAAAHIEDAL 186
Query: 191 KLGVEI---DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+L I D C N ++ GLC G L A + E + P V TY+T++H L +G
Sbjct: 187 RLFRNIPKPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREG 246
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++A + M G+ + VT++ LI GL K G+ ++LL+RM + PN+ +Y
Sbjct: 247 CFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMVKEKKLPNTITYS 306
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQ 366
V+ GL + EA E++ RM + P + KLI GLC+ + VE ++ L +MV
Sbjct: 307 SVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANY-LDEMVL 365
Query: 367 QGFVPRMGMW 376
G P W
Sbjct: 366 AGIEPNRVTW 375
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 12/301 (3%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P A Y N L +A DA I +++ + D YN I GR+++
Sbjct: 160 FAPTAATY----NVLLKAHCSDAAAHIEDALRLFRNIPKPDVCSYNTIIDGLCRRGRLAE 215
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A++ +M P+V T+ V++ L + + I+ + GV + + L+
Sbjct: 216 ALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLID 275
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ G +A +LD K+ PN TYS+++ GLC++ + EA +L+RM +G
Sbjct: 276 GLCKGGRATSALELLDRMVKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKP 335
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ-------EVLYGLLDKKRF 319
D F LI GL G+ E L+ M G PN ++ VL L DK
Sbjct: 336 DAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNRVTWSLHARINNTVLTALCDKGEL 395
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A ++ +S ++ L+ +E V+ M+ + +P W I
Sbjct: 396 GRAFQVYQSTRTRSISTDPTTFHLLVESFSKNN-IEKAARVVLDMLSERCIPERETWDAI 454
Query: 380 V 380
+
Sbjct: 455 I 455
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 25/252 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
P YT +I+ LA+ FD I + G N++ Y ++ G
Sbjct: 230 PTVVTYTTVIHWLAREGCFDDALKIFHEMGRR-------GVSPNLV-TYSSLIDGLCKGG 281
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R + A+E L M P+ T++ V++ L + E + G + DA
Sbjct: 282 RATSALELLDRMVKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFG 341
Query: 203 ILLKGLCENGN-LEAAFYVLDEFPKQNCEPNVRTYS-------TLMHGLCEKGNVEEAFG 254
L+ GLC+ G +EAA Y LDE EPN T+S T++ LC+KG + AF
Sbjct: 342 KLIVGLCDAGRAVEAANY-LDEMVLAGIEPNRVTWSLHARINNTVLTALCDKGELGRAFQ 400
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ + + I D TF++L+ K +E+ +++ M + C P ++ ++ G
Sbjct: 401 VYQSTRTRSISTDPTTFHLLVESFSKN-NIEKAARVVLDMLSERCIPERETWDAIISGYW 459
Query: 315 DKKRF-PEAKEL 325
KK+ EAKE+
Sbjct: 460 SKKKVRQEAKEI 471
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 157/350 (44%), Gaps = 46/350 (13%)
Query: 65 FSNLRDPISVISVLNQYSKRKDY------NPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
++ L D S S +++ K D P Y I++ + + ++++ +++
Sbjct: 216 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 275
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
E+ C F +++ Y + GR +A + L +M + C P V + +++LL S
Sbjct: 276 -ERGCEPGLFIFTSLLSYYLS-KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 333
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
E + ++ S + G DA +++ + GN+EAA +L+ K P+ Y++
Sbjct: 334 VPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNS 393
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN-------------------------- 272
LM G + V++AFG+ +RM + GI + VTFN
Sbjct: 394 LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKE 453
Query: 273 ----------ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
ILI GL K G+V E + M +G P +Y ++Y L R PEA
Sbjct: 454 EVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 513
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW-VLKKMVQQGFVP 371
K+LV M+ ++P +Y LI GL + +V D W V ++M+++G P
Sbjct: 514 KKLVEDMVKLGVNPDVQAYSALITGLIDSSMV-DTAWDVFQEMMKRGCAP 562
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 138/313 (44%), Gaps = 24/313 (7%)
Query: 76 SVLNQYSKRKDYN--------PNEAL----YTLIINKLAQAKRFDAIEDIMQRIKVEKLC 123
SV++ Y K D + P +L YT +I LA +KR D ++ + +K
Sbjct: 81 SVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELK----- 135
Query: 124 RFSDGFFYNVIKIYGNM-----AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+ G NV+ + AGRI ++ +M +C P+ T+ +V++ L A++
Sbjct: 136 --TAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQM 193
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ ++ + G D L+ G + ++ A +LD + EP TY +
Sbjct: 194 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 253
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++HG C+ + EA ++ +M G + F L+S +G+ EE ++L M +G
Sbjct: 254 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 313
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C P+ Y ++ L R PEA+ + MI + +P ++Y +I VE
Sbjct: 314 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAG 373
Query: 359 WVLKKMVQQGFVP 371
+L+ M + G P
Sbjct: 374 EILELMAKSGVGP 386
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 133/299 (44%), Gaps = 5/299 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL + + R P+ LYT +I+ L R + + +EK C D Y I
Sbjct: 305 VLTEMTARG-CAPDVILYTSLIDLLFSTGRVPEARHVFDSM-IEKGCA-PDALTYGTIIQ 361
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ G + A E L M P +N +++ V + + G+Y G++
Sbjct: 362 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 421
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDE-FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+A N+L+ GL ++G + AF + E K+ P + +Y+ L+ GL + G V EAF
Sbjct: 422 NAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQ 481
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+ M GI + T+ LI L K G++ E KL+E M G P+ +Y ++ GL+D
Sbjct: 482 FQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLID 541
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
A ++ M+ +P+ V+YK L G D++ V K+ QG G
Sbjct: 542 SSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV-KQHFSQGVAMEAG 599
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 99/201 (49%)
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
G++ Y A +D ++KGL ++ ++ A + +E C PNV Y+ +
Sbjct: 90 GDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAV 149
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ GL + G +E+ E M T+ ++I GL K + + K+ E+M KGC
Sbjct: 150 IDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGC 209
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P++ +Y ++ G + EA++L+ M+ + P+ V+Y ++HG C ++ +
Sbjct: 210 VPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKE 269
Query: 360 VLKKMVQQGFVPRMGMWREIV 380
V+ +M ++G P + ++ ++
Sbjct: 270 VIAQMRERGCEPGLFIFTSLL 290
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 138/329 (41%), Gaps = 46/329 (13%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDA--IE 111
D ++ T ++ F P +LNQ KR + P+ LYT +I+ +A D
Sbjct: 41 DVIAFTTLIHGFCKAGQPQVGHKLLNQALKR--FRPDVFLYTSVIHGYCKAGDLDTGYFR 98
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+ + ++ + + VIK + + RI +A E ++ + C P+V + V++
Sbjct: 99 AVTPKASLDVIS------YTTVIKGLAD-SKRIDEACELFEELKTAGCSPNVVAYTAVID 151
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
GL + G +E +E +C P
Sbjct: 152 -----------------------------------GLLKAGRIEDGLKNFEEMSGSSCVP 176
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
TY+ ++ GLC+ + +A + E+M +G DT+T+ LI G K K++E KLL
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ M KG P + +Y +++G EAKE++ +M P + L+ ++
Sbjct: 237 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 296
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E+ VL +M +G P + ++ ++
Sbjct: 297 GRAEEAYQVLTEMTARGCAPDVILYTSLI 325
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 31/211 (14%)
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
+G E N ++ GL ++ A+ + CEP+V ++TL+HG C+ G +
Sbjct: 1 MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 252 AFGLLE-------------------------------RMESEGIDADTVTFNILISGLRK 280
LL R + D +++ +I GL
Sbjct: 61 GHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+++E +L E +K GC PN +Y V+ GLL R + + M P+ +
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I GLC +++ D V ++MVQ+G VP
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVP 211
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 31/184 (16%)
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
CEP + +Y+T++ GL ++EA+ M G + D + F LI G K G+ + G
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 288 MKLLER---------------MKG------------KGCYPNSA----SYQEVLYGLLDK 316
KLL + + G + P ++ SY V+ GL D
Sbjct: 62 HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADS 121
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
KR EA EL + SP+ V+Y +I GL +ED ++M VP +
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181
Query: 377 REIV 380
++
Sbjct: 182 TVVI 185
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 150/340 (44%), Gaps = 39/340 (11%)
Query: 66 SNLRDPI-SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
+NL + + S SV N K K NE YT +I+ L + R D +I ++++ E C
Sbjct: 14 ANLNNDVNSAFSVFNMMPK-KGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMR-EDDC- 70
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
+ Y VI +GR +AI +M C P++ T+ +++N + E +
Sbjct: 71 YPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRR 130
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
I + G+ N L+ G C+ G +EAA +LD +C PN RTY+ L+ G C
Sbjct: 131 ILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFC 190
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISG--------------------------- 277
K NV A LL +M + VT+N LI G
Sbjct: 191 RKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQW 250
Query: 278 --------LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
L K+G++EE L +K KG N Y ++ G + +A L+ RM
Sbjct: 251 TYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRM 310
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ E P+ +Y LI GLC ++ V++ +++ M+Q+G
Sbjct: 311 LTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGL 350
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 151/308 (49%), Gaps = 4/308 (1%)
Query: 75 ISVLNQYSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ +N +S+ ++ PN YT++IN + + + + I+ + VEK S +
Sbjct: 91 MEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEM-VEKGLVPSVPTYNA 149
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+I Y G + A E L M S +C P+ +T+N ++ K + + +
Sbjct: 150 LIDGYCK-EGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLES 208
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
+ N L+ G C+ G L++A+ +L+ + P+ TYS + LC+KG +EEA
Sbjct: 209 RLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEA 268
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L ++ +GI A+ V + LI G K GK+++ LL+RM + C PNS++Y ++ G
Sbjct: 269 NVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDG 328
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L +++ EA L+ MI + + + +Y LI + + + +L +MV G+ P
Sbjct: 329 LCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPD 388
Query: 373 MGMWREIV 380
+ ++ +
Sbjct: 389 VYIYTAFI 396
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 142/323 (43%), Gaps = 31/323 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P++ Y++ I+ L + R + + +K EK + ++ + +I Y AG++ A
Sbjct: 247 PDQWTYSVFIDTLCKKGRIEEANVLFNSLK-EKGIKANEVIYTALIDGYCK-AGKMDDAN 304
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M + +C P+ T+N +++ L + E + S + G++ IL+ +
Sbjct: 305 SLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAM 364
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G+ + A +LD+ +P+V Y+ +H C +GN++EA ++ M G+ D
Sbjct: 365 LKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDA 424
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK----------- 317
+T+ ++I G + +L+RM GC P+ +Y ++ LL ++
Sbjct: 425 LTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALC 484
Query: 318 ------------------RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
+F A EL +M+ SP+ +Y KLI GLC +
Sbjct: 485 DSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQK 544
Query: 360 VLKKMVQQGFVPRMGMWREIVGC 382
+ M ++G P ++ ++ C
Sbjct: 545 LFDHMNERGVSPSEAIYNSLLNC 567
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 127/285 (44%), Gaps = 4/285 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISK 146
NPNE Y +I + K ++ ++ +L YN + I+G G +
Sbjct: 176 NPNERTYNELICGFCRKKNVHRAMALLSKMLESRL--TPSVVTYNSL-IHGQCKIGYLDS 232
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M P T+++ ++ L E ++ S + G++ + L+
Sbjct: 233 AYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALID 292
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+ G ++ A +LD ++C PN TY+ L+ GLC++ V+EA L+E M +G+
Sbjct: 293 GYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKC 352
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
T+ ILI + K+G + ++L++M G P+ Y ++ + EA++++
Sbjct: 353 TVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMM 412
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + P ++Y +I L+ VLK+M G P
Sbjct: 413 SMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDP 457
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 12/284 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRIS 145
Y P+ +YT I+ ED+M + + D Y VI YG + G ++
Sbjct: 385 YQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGV--MPDALTYTLVIDAYGGL-GLLN 441
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI-DACCLNIL 204
A + L M C PS T++ ++ L+ +L + + + + V D + +
Sbjct: 442 PAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKM 501
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+K E A + ++ + C PN+ TY+ L+ GLC+ G + A L + M G+
Sbjct: 502 MK-------FETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGV 554
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+N L++ + G + ++L+ M G P S + GL ++ +AK
Sbjct: 555 SPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKV 614
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ ++ + V++K LI GL L + +L M +G
Sbjct: 615 VFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARG 658
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 12/228 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC-RFSDGFFYNVIKIYGNMAGRISK 146
+P+ Y+ +I L + E++ ++ K LC + FF +V ++ M +
Sbjct: 456 DPSHHTYSCLIKHLLK-------EELTKKYKNVALCDSIPNVFFADVADVWKMM--KFET 506
Query: 147 AIETLFDMPSYNCWPSVKTF-NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A+E M + C P++ T+ L++ L +L G Q ++ + GV N LL
Sbjct: 507 ALELFEKMLEHGCSPNINTYAKLIIGLCKVGRL-GVAQKLFDHMNERGVSPSEAIYNSLL 565
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
CE G A ++ + P + + + L GL E+G+ E+A + + G +
Sbjct: 566 NCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYN 625
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
D V + ILI GL K G + +LL M+ +GC + +Y+ ++ GL
Sbjct: 626 DDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 156/351 (44%), Gaps = 37/351 (10%)
Query: 40 HQDSDHHAYKLNH-KDWLSP-TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLI 97
H SD HA H +D LSP L + S + D S+ S S+ +NP I
Sbjct: 72 HILSDAHASASRHAEDLLSPRVSTLLLQSLVADRASLPSARRLVSRLLRFNPLSVAAAAI 131
Query: 98 INKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY 157
+ A D++ R C S G +S+A + ++ +
Sbjct: 132 ADS-----HCTATADLLVRA-----CLNSPA------------PGSLSRAADAFLELSAR 169
Query: 158 NCWPSVKTFNLVLNLL-------VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
PS+KT ++++ L V+ K++GE++ T A D ++K LC
Sbjct: 170 GASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAP------DVHTYTAMIKALCR 223
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G ++AAF +L E + +P V TY+ LM LC+ G VEEAF L RM + VT
Sbjct: 224 AGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVT 283
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
F ILISGL + + E +L+ M+G G PN Y E++ K EA +L M+
Sbjct: 284 FGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMV 343
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ + + V+Y + LC + +E + +L +M+ G + ++ +V
Sbjct: 344 SKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVA 394
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 8/279 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRISKAIETLF 152
Y ++I +A + D E I R + K D F +N+ + Y N+ G++ + + L
Sbjct: 495 YNIMIQGCCKASKMD--EAIQLRDDMIKRGFKPDLFTFNIFLHTYCNL-GKVEEILHLLD 551
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M S P + T+ +++ AK + T K G+ +A N L+ G NG
Sbjct: 552 QMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNG 611
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
N+ A +LD +P TY++LM+ +C G VEE + + + I+ + +
Sbjct: 612 NISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYT 671
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
I+I G K GK++E + + M +G PN +Y +++ EA +L M+
Sbjct: 672 IIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSL 731
Query: 333 RMSPSFVSYKKLIHGLCN----QKLVEDVDWVLKKMVQQ 367
+ P VSY LI G C K+VE + ++++Q
Sbjct: 732 GIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQ 770
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 4/257 (1%)
Query: 112 DIMQRIKVEKLCRF---SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL 168
D++ R+ E L RF +D I+ +G+ +A E F + +V T N
Sbjct: 404 DLVLRLIREMLARFLKPNDALMTACIQELCK-SGKHEEAAEIWFQVLGKGLGVNVATSNA 462
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
+++ L E + + GVE+D NI+++G C+ ++ A + D+ K+
Sbjct: 463 LIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRG 522
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
+P++ T++ +H C G VEE LL++M+SEG+ D VT+ +I G K + +
Sbjct: 523 FKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKAN 582
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ L + G PN+ Y ++ G +A ++ M + P+ V+Y L++ +
Sbjct: 583 EYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWM 642
Query: 349 CNQKLVEDVDWVLKKMV 365
C+ LVE+V V + +
Sbjct: 643 CHAGLVEEVKAVFAQCI 659
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 133/307 (43%), Gaps = 16/307 (5%)
Query: 63 KIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL 122
K+F +RD K P+ YT +I L +A DA ++ ++ +
Sbjct: 196 KVFGEMRD-------------GKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGI 242
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
YNV+ +GR+ +A M PS+ TF ++++ L + +GE+
Sbjct: 243 --QPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEV 300
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ G+ + N ++ C G+ A + DE + + V TY+ +
Sbjct: 301 GAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKA 360
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILIS-GLRKQGKVEEGMKLLERMKGKGCYP 301
LC++G +E A +L+ M G+ FN +++ LR G+++ ++L+ M + P
Sbjct: 361 LCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKP 420
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N A + L + EA E+ +++ + + + + LIHGLC +++ VL
Sbjct: 421 NDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVL 480
Query: 362 KKMVQQG 368
K MV G
Sbjct: 481 KAMVNSG 487
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 124/288 (43%), Gaps = 12/288 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGNMAGR- 143
PN+AL T I +L ++ + + +I ++ G NV I+G G
Sbjct: 420 PNDALMTACIQELCKSGKHEEAAEIWFQV-------LGKGLGVNVATSNALIHGLCQGNN 472
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A + L M + T+N+++ A E + K G + D NI
Sbjct: 473 MKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNI 532
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L C G +E ++LD+ + +P++ TY T++ G C+ ++ +A L + G
Sbjct: 533 FLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNG 592
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + V +N LI G + G + + + +L+ MK G P +Y ++Y + E K
Sbjct: 593 LRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVK 652
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + I + + + Y +I G C +++ K+M +G P
Sbjct: 653 AVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPP 700
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 1/278 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y LI L + + E I+ + + + F +V+ + GR+ + + +
Sbjct: 354 YNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCS-LFNSVVAWHLRGTGRLDLVLRLIRE 412
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P+ + L + + E I+ G+ ++ N L+ GLC+ N
Sbjct: 413 MLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNN 472
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A VL E + TY+ ++ G C+ ++EA L + M G D TFNI
Sbjct: 473 MKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNI 532
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+ GKVEE + LL++MK +G P+ +Y ++ G K +A E + ++
Sbjct: 533 FLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNG 592
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P+ V Y LI G + D +L M G P
Sbjct: 593 LRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQP 630
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 145/329 (44%), Gaps = 38/329 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + ++I+ LA+ ++F + ++Q +++ + YN + + G S+A+
Sbjct: 279 PSIVTFGILISGLARGQQFGEVGAVLQ--EMQGFGITPNEVIYNEMIGWHCRKGHCSEAL 336
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL---- 204
+ +M S +V T+NL+ L + I G+ + N +
Sbjct: 337 KLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWH 396
Query: 205 LKG--------------------------------LCENGNLEAAFYVLDEFPKQNCEPN 232
L+G LC++G E A + + + N
Sbjct: 397 LRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVN 456
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
V T + L+HGLC+ N++EA +L+ M + G++ D +T+NI+I G K K++E ++L +
Sbjct: 457 VATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRD 516
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M +G P+ ++ L+ + + E L+ +M E + P V+Y +I G C K
Sbjct: 517 DMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAK 576
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ + L ++++ G P ++ ++G
Sbjct: 577 DMHKANEYLTELMKNGLRPNAVIYNALIG 605
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 3/252 (1%)
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK 121
L + NL ++ +L+Q K + P+ Y II+ +AK + + +
Sbjct: 534 LHTYCNLGKVEEILHLLDQM-KSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNG 592
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
L R + + +I YG G IS AI L M P+ T+N ++ + A L E
Sbjct: 593 L-RPNAVIYNALIGGYGR-NGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEE 650
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
++ ++ +E+ I+++G C+ G ++ A E + PN TY+TLM
Sbjct: 651 VKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMF 710
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
+ GN EEA L + M S GI D+V++N LISG + +++ ++ M +
Sbjct: 711 AYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQ 770
Query: 302 NSASYQEVLYGL 313
+ SY + G+
Sbjct: 771 DGCSYNAFVDGI 782
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 129/260 (49%), Gaps = 2/260 (0%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
A Y L ++ L R +++ + + L D F YN++ G+ KA++
Sbjct: 255 ATYNLFVHTLFMEGRAAEAHALVEEMGEKGLA--PDAFTYNILINGYCKEGKEKKAMKMF 312
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
M +V T+ +++ L + E ++ A + G+ D N L+ C
Sbjct: 313 EVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTG 372
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G+++ AF ++ E K+ P+ TY+TLM GLC G ++EA GL+E M GI D V++
Sbjct: 373 GDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSY 432
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N LISG +G +++ +K+ + M GKG P +Y ++ GL + +A++LV M+
Sbjct: 433 NTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVG 492
Query: 332 ERMSPSFVSYKKLIHGLCNQ 351
++P +Y LI GL +
Sbjct: 493 NGITPDDSTYISLIEGLTTE 512
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 148/317 (46%), Gaps = 18/317 (5%)
Query: 78 LNQYSKRKDYN---PNEALYTLIINKLAQAKRFDAIEDIMQ-RIKVEKLCRFSDGFFYNV 133
L+ YS+ K + P +L+ L+ + L A F DI + R+ + +N+
Sbjct: 70 LSLYSRLKSLSLPIPTASLHPLL-SSLPPAPAFVLFADIFRLRLPLSTTT-------FNI 121
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL-NLLVSAKLYGEIQGIYTSAAKL 192
+ + AG+ +A+E L MPS P+ T+N V+ ++ I+ + +
Sbjct: 122 MLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREMRERG 177
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEKGNVEE 251
G+ D ++ G C+ G +E A V DE + EPN Y+ L+ G C++GN+E
Sbjct: 178 GIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEV 237
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A M G+ T+N+ + L +G+ E L+E M KG P++ +Y ++
Sbjct: 238 ALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILIN 297
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G + + +A ++ M+ + + + V+Y LIH L + +V++ D + V++G P
Sbjct: 298 GYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRP 357
Query: 372 RMGMWREIVGCVTFGKD 388
+ M+ ++ G D
Sbjct: 358 DLFMYNALINSHCTGGD 374
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 138/332 (41%), Gaps = 36/332 (10%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I ++ + +R P++ Y +I+ + + + + + E + + +I
Sbjct: 167 IEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALI 226
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
Y + G + A+ +M +V T+NL ++ L E + + G+
Sbjct: 227 GGYCDQ-GNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGL 285
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL----------- 243
DA NIL+ G C+ G + A + + + V TY++L+H L
Sbjct: 286 APDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDR 345
Query: 244 ------------------------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
C G+++ AF ++ ME + I D VT+N L+ GL
Sbjct: 346 LFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLC 405
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
G+++E L+E M +G P+ SY ++ G K +A ++ M+ + +P+ +
Sbjct: 406 LLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLL 465
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I GLC D + ++K+MV G P
Sbjct: 466 TYNAMIKGLCLNGQGGDAEDLVKEMVGNGITP 497
>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 4/222 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T V+ +L +A E + LG +DA N L+KG C G ++ +
Sbjct: 276 PDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHF 335
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + + PNV TY+ L++G CE ++ A L M+++GI+ + VTF+ +I GL
Sbjct: 336 LKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCS 395
Query: 281 QGKVEEGMKLLERMK--GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
+G++E+G +LE M+ +G + + Y ++YGL + RF EA E + +M ++ P
Sbjct: 396 EGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKM--GKLFPRA 453
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V I C + +ED + KM+ +G +P + ++ +V
Sbjct: 454 VDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLV 495
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 7/295 (2%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ +++ Y +I+KL +RFD ++ ++ + + F +++ G +++
Sbjct: 67 FTHSQSTYRTLIHKLCIFRRFDTVKQLLDEMPTSIGANPGEDIFITIVR--GLSRAGMTR 124
Query: 147 AIETLFDMP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+ T+ D+ ++ PS+K FN +L++LV + + S + GV D IL+
Sbjct: 125 RVITVLDLAYKFHGTPSLKIFNSILDVLVKEDIDMAREFYRKSMMESGVRGDDYTFGILM 184
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
KGLC + F +L PN Y+TL+H LC G V A L+ M +D
Sbjct: 185 KGLCLTNRIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEM----VD 240
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ VTFNILIS K+ + + + LLE+ P+ + +V+ L + R EA E+
Sbjct: 241 PNEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEV 300
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ R+ S V+Y LI G C V+ LK+M +G++P + + ++
Sbjct: 301 LERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILI 355
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/324 (18%), Positives = 140/324 (43%), Gaps = 37/324 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ T ++ L A R ++++R VE L D YN + G++ +
Sbjct: 276 PDVVTVTKVVEILCNAGRVTEAAEVLER--VESLGGSLDAVAYNTLIKGFCGVGKVKVGL 333
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M + P+V T+N+++ +++ ++ G+ + + +++GL
Sbjct: 334 HFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGL 393
Query: 209 CENGNLEAAFYVLD--EFPKQNCEPNVRTYSTLMHGL----------------------- 243
C G +E F +L+ E K+ + ++ Y+++++GL
Sbjct: 394 CSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGKLFPRA 453
Query: 244 ----------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
C++G +E+A + ++M EG + +N L+ G + G + E ++L+
Sbjct: 454 VDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINE 513
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M C+P ++++ ++ ++ + A + + + P+ +Y LI LC +
Sbjct: 514 MISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGD 573
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWR 377
++ V +MV++G +P +W+
Sbjct: 574 IQKALQVFLEMVEKGILPDQCIWK 597
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 127/286 (44%), Gaps = 12/286 (4%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA- 141
+ K Y PN Y ++I +++ D D+ +K + + R F I G +
Sbjct: 340 ENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINR---NFVTFDTMIRGLCSE 396
Query: 142 GRISK--AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
GRI +I L + + +N ++ L + E KL
Sbjct: 397 GRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGKLFPRAVDR 456
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+ I+ K C+ G +E A + D+ + P++ Y++L+HG + G++ EA L+ M
Sbjct: 457 SMTIIQK--CKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEM 514
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S TFN +I+ +QGK+E +K +E + +GC PN+ +Y ++ L K
Sbjct: 515 ISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGDI 574
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQ----KLVEDVDWVL 361
+A ++ M+ + + P +K L+ L Q K V ++D++L
Sbjct: 575 QKALQVFLEMVEKGILPDQCIWKSLLLSLSLQNNFNKNVSNIDYLL 620
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 119/240 (49%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G S A++ L M C P++ + +++ L L + + + G+ D
Sbjct: 210 SGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVT 269
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ +L G C G+L A + +E +N PN T++ L+ GLC++G V EA + E M
Sbjct: 270 YSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMT 329
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G + + T+N L+ G +++E K+L+ M KGC P SY ++ G ++R
Sbjct: 330 KKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLD 389
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EAK L+ M + ++P V+Y L+ GLC ++ + K+M G +P + + ++
Sbjct: 390 EAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLL 449
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 149/334 (44%), Gaps = 39/334 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA- 141
+ K PN YT II+ L + + D++ + + D Y+ I ++G +
Sbjct: 224 EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIP--PDVVTYSTI-LHGFCSL 280
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +++A +M N P+ TF ++++ L + E + ++ + K G E +A
Sbjct: 281 GHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTY 340
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR--------------------------- 234
N L+ G C N ++ A VLD + C P V
Sbjct: 341 NALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSE 400
Query: 235 --------TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
TYSTLM GLC+ G +EA L + M S G+ D +T++ L+ GL K G ++E
Sbjct: 401 KELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDE 460
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+KLL+ M+ P+ Y ++ G+ + AKEL ++ + + P+ +Y +I
Sbjct: 461 ALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIK 520
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
GL + L ++ + +KM GF+P + I+
Sbjct: 521 GLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVII 554
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I A+ + + M N PSV F L + K Y + + GV + LNI
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ LC ++ A VL + K +P+ T++TL++G C +G ++EA GL M G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D ++++ +I+GL K G ++LL +M+ KGC PN +Y ++ L +A
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L+ M+ + P V+Y ++HG C+ + + + +MV + +P
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMP 300
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 133/281 (47%), Gaps = 2/281 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +T++++ L + + + + K + + YN + + ++ +A
Sbjct: 300 PNTVTFTILVDGLCKEGMVSEARCVFEAMT--KKGAEPNAYTYNALMDGYCLNNQMDEAQ 357
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L M C P V ++N+++N + E + + ++ + D + L++GL
Sbjct: 358 KVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGL 417
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G + A + E P++ TYSTL+ GLC+ G+++EA LL+ M+ I+ D
Sbjct: 418 CQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDI 477
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +NILI G+ GK+E +L ++ G P +Y ++ GLL + EA EL +
Sbjct: 478 VLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRK 537
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
M + P+ SY +I G + ++ +MV + F
Sbjct: 538 MEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRF 578
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 139/297 (46%), Gaps = 2/297 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ + P+ Y+ +IN L ++ ++++++ EK C+ + + +I
Sbjct: 190 RRGHQPDVISYSTVINGLCKSGNTSMALQLLRKME-EKGCKPNLVAYTTIIDSLCK-DTL 247
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
++ A++ L +M P V T++ +L+ S E ++ V + I
Sbjct: 248 VNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTI 307
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+ G + A V + K+ EPN TY+ LM G C ++EA +L+ M +G
Sbjct: 308 LVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
++NILI+G K+ +++E LL M K P++ +Y ++ GL R EA
Sbjct: 368 CAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEAL 427
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L M + P ++Y L+ GLC +++ +LK M + P + ++ ++
Sbjct: 428 NLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILI 484
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 2/262 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K PN Y +++ + D + ++ I V+K C + +I Y R
Sbjct: 330 KKGAEPNAYTYNALMDGYCLNNQMDEAQKVLD-IMVDKGCAPVVHSYNILINGYCKRR-R 387
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A L +M P T++ ++ L E ++ G+ D +
Sbjct: 388 LDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYST 447
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC++G+L+ A +L + EP++ Y+ L+ G+ G +E A L ++ ++G
Sbjct: 448 LLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADG 507
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I T+ I+I GL K+G +E +L +M+ G PNS SY ++ G L + A
Sbjct: 508 IQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAI 567
Query: 324 ELVGRMICERMSPSFVSYKKLI 345
L+ M+ +R S +++ L+
Sbjct: 568 RLIDEMVGKRFSADSSTFQMLL 589
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A+FY + N P+V + + + +K L +M+ G+ + + NILI
Sbjct: 78 ASFY---RMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILI 134
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+ L + V + +L +M G P++ ++ ++ G + EA L M+
Sbjct: 135 NCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQ 194
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P +SY +I+GLC +L+KM ++G P + + I+
Sbjct: 195 PDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTII 239
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 157/350 (44%), Gaps = 46/350 (13%)
Query: 65 FSNLRDPISVISVLNQYSKRKDY------NPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
++ L D S S +++ K D P Y I++ + + ++++ +++
Sbjct: 471 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 530
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
E+ C F +++ Y + GR +A + L +M + C P V + +++LL S
Sbjct: 531 -ERGCEPGLFIFTSLLSYYLS-KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 588
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
E + ++ S + G DA +++ + GN+EAA +L+ K P+ Y++
Sbjct: 589 VPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNS 648
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN-------------------------- 272
LM G + V++AFG+ +RM + GI + VTFN
Sbjct: 649 LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKD 708
Query: 273 ----------ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
ILI GL K G+V E + M +G P +Y ++Y L R PEA
Sbjct: 709 EVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 768
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW-VLKKMVQQGFVP 371
K+LV M+ ++P +Y LI GL + +V D W V ++M+++G P
Sbjct: 769 KKLVEDMVKLGVNPDVQAYSALITGLIDSSMV-DTAWDVFQEMMKRGCAP 817
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 133/273 (48%), Gaps = 9/273 (3%)
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
D ++ ++Q ++ + F D YN++ + A R+ A+E + SY C P+ T+
Sbjct: 282 DGLKLLLQMVECDN---FPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYT 338
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
++ L A+ E + + A +D ++KGL ++ ++ A + ++
Sbjct: 339 TIIQGLYDAQRMEEAKAFFDEA------LDVISYTTVIKGLADSKRIDEACELFEKLKTA 392
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
C PNV Y+ ++ GL + G +E+ E M T+ ++I GL K + +
Sbjct: 393 GCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDA 452
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
K+ E+M KGC P++ +Y ++ G + EA++L+ M+ + P+ V+Y ++HG
Sbjct: 453 CKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 512
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C ++ + V+ +M ++G P + ++ ++
Sbjct: 513 FCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 545
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 122/284 (42%), Gaps = 36/284 (12%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A +I KAIE +MPS C P++ ++N V++ L S E + S G E D
Sbjct: 33 ARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIA 92
Query: 201 LNILLKGLCENG----------------------------------NLEAAFYVLDEFPK 226
L+ G C+ G +L+ F +L+E
Sbjct: 93 FTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLA 152
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
C P+ Y L+ LC+ G V+EA+ L ERM G D VTF LI L GK++E
Sbjct: 153 AGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDE 212
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+L M +G P +++ L + EA E+ ++ ++++ S V+Y L+
Sbjct: 213 ACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMD 272
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
G C V+D +L +MV+ P + + +V F + NR
Sbjct: 273 GYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVA--GFSRANR 314
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 16/291 (5%)
Query: 90 NEAL----YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM----- 140
+EAL YT +I LA +KR D ++ +++K + G NV+ +
Sbjct: 358 DEALDVISYTTVIKGLADSKRIDEACELFEKLK-------TAGCSPNVVAYTAVIDGLLK 410
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGRI ++ DM +C P+ T+ +V++ L A++ + ++ + G D
Sbjct: 411 AGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTIT 470
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G + ++ A +LD + EP TY +++HG C+ + EA ++ +M
Sbjct: 471 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 530
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G + F L+S +G+ EE ++L M +GC P+ Y ++ L R P
Sbjct: 531 ERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVP 590
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA+ + MI + +P ++Y +I VE +L+ M + G P
Sbjct: 591 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGP 641
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 3/263 (1%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A++ L +M + P V N+VLN L A+ + ++ +G E N
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ GL ++ A+ + CEP+V ++TL+HG C+ G + LL +
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D + +I G K G ++ G K+LE M GC P++A+Y ++ L R EA
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG-- 381
EL RM +V++ LI L N +++ + ++M+++G+ P + + ++
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239
Query: 382 CVTFGKDNRNRVYVTETVDSLAS 404
C D N +Y T +A+
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVAT 262
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 4/287 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ LYT +I+ L R + + +EK C D Y I + G + A
Sbjct: 571 PDVILYTSLIDLLFSTGRVPEARHVFDSM-IEKGCA-PDALTYGTIIQNFSKIGNVEAAG 628
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M P +N +++ V + + G+Y G++ +A N+L+ GL
Sbjct: 629 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 688
Query: 209 CENGNLEAAFYVLDE-FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
++G + AF + E K P + +Y+ L+ GL + G V EAF + M GI +
Sbjct: 689 FKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPE 748
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+ LI L K G++ E KL+E M G P+ +Y ++ GL+D A ++
Sbjct: 749 CHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQ 808
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
M+ +P+ V+YK L G D++ V K+ QG G
Sbjct: 809 EMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV-KQHFSQGVAMEAG 854
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 146/327 (44%), Gaps = 10/327 (3%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ T ++ F P +LNQ KR + P+ LYT +I+ +A D I
Sbjct: 89 DVIAFTTLIHGFCKAGQPQVGHMLLNQALKR--FRPDVFLYTSVIHGYCKAGDLDTGFKI 146
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
++ + + C ++ +I + GR+ +A E M C TF ++ L
Sbjct: 147 LEEM-LAAGCIPDAAAYFVLIDPLCKL-GRVDEAYELFERMRKSGCLGDYVTFMTLIEAL 204
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ E +Y + G E + L+ LC+ G ++ A + + +
Sbjct: 205 SNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSR 264
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
Y++LM G C+ G V++ LL +M D T+NIL++G + ++++ ++L +
Sbjct: 265 VAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKL 324
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+ GC PN+A+Y ++ GL D +R EAK + +SY +I GL + K
Sbjct: 325 LSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKR 378
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
+++ + +K+ G P + + ++
Sbjct: 379 IDEACELFEKLKTAGCSPNVVAYTAVI 405
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 148/327 (45%), Gaps = 38/327 (11%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
+++++Y + + Y +I L +++ + ++Q + +C + ++I++ GN A
Sbjct: 110 ARKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGN-A 168
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI-DACC 200
ISKA+ + + + C P+ +N ++ +L+ Y ++ +Y + G D
Sbjct: 169 KMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVT 228
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPK---------------------------------- 226
+ L+ C+ G ++A ++L+E
Sbjct: 229 YSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMR 288
Query: 227 -QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
Q C P+V TY+ L+ GL + G ++EA+ M EG DTV N +I+ L K G+++
Sbjct: 289 HQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLD 348
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLD-KKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ +KL E M+ C P+ +Y ++ L + K R E RM +SPS +Y L
Sbjct: 349 DAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSIL 408
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I G C E +L++M ++GF P
Sbjct: 409 IDGFCKTNRTEKAMMLLEEMDEKGFPP 435
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 134/317 (42%), Gaps = 38/317 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +I L +A R D + ++ E CR N+I G AGR+ AI
Sbjct: 294 PDVFTYTELIRGLGKAGRLDEAYNFFHEMRREG-CRPDTVLMNNMINFLGK-AGRLDDAI 351
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAK-LYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +M + C PSV T+N ++ L +K EI + G+ +IL+ G
Sbjct: 352 KLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDG 411
Query: 208 LCENGNLEAAFYVLDE-----FP-----------------------------KQNC-EPN 232
C+ E A +L+E FP K+NC +
Sbjct: 412 FCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSS 471
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
R Y+ ++ L + G +++A L + M G + +N L+SGL + G ++E + +
Sbjct: 472 ARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMR 531
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
RM+ GC P+ SY +L L A ++ M + P VSY ++ L +
Sbjct: 532 RMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAG 591
Query: 353 LVEDVDWVLKKMVQQGF 369
+ E+ ++K+M GF
Sbjct: 592 MFEEAAKLMKEMNAIGF 608
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 3/261 (1%)
Query: 89 PNEALYTLIINKLAQAK-RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y II L ++K R I +R+K + F Y+++ R KA
Sbjct: 364 PSVVTYNTIIKALFESKSRVSEISSWFERMKGSGIS--PSPFTYSILIDGFCKTNRTEKA 421
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L +M P + +++ L AK Y ++ + A +++K
Sbjct: 422 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKH 481
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L + G L+ A + DE + C PNV Y+ LM GL G ++EA + RM+ G D
Sbjct: 482 LGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPD 541
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++NI+++ L K G + M +L MK P++ SY VL L F EA +L+
Sbjct: 542 INSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMK 601
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M ++Y ++ +
Sbjct: 602 EMNAIGFDYDLITYSSILEAI 622
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 5/202 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P A Y +I+ L +AKR+D ++ Q +K + C S Y V+ + AGR+
Sbjct: 431 KGFPPCPAAYCSLIDALGKAKRYDLANELFQELK--ENCGSSSARVYAVMIKHLGKAGRL 488
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A++ +M C P+V +N +++ L A + E G D NI+
Sbjct: 489 DDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNII 548
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L L + G + A +L + +P+ +Y+T++ L G EEA L++ M + G
Sbjct: 549 LNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGF 608
Query: 265 DADTVTFNILISGLRKQGKVEE 286
D D +T++ ++ + GKV++
Sbjct: 609 DYDLITYSSILEAI---GKVDQ 627
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 141/285 (49%), Gaps = 2/285 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +++ + + + +++ ++VE C ++ YNVI G + A
Sbjct: 185 PDVVTYNILLEAACKGRGYRQAMELIDLMRVEG-CTPTN-VTYNVIMDGMCREGDVDYAR 242
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +PSY C P+ +N VL L +A + +++ + L++++ L
Sbjct: 243 ELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSL 302
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G + A +L++ K +C N+ TY+ ++ GLCE+G+V+ A LL M+++G +
Sbjct: 303 CQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNI 362
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+NIL+ GL + E+ L+ +M C P+ ++ ++ L K +A E+ +
Sbjct: 363 FTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQ 422
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
M + P+ V+Y +I GL +E +L +M +GF P +
Sbjct: 423 MPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEI 467
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 8/288 (2%)
Query: 102 AQAKRFDAIEDIMQRI-KVEKLCRFSDG-------FFYNVIKIYGNMAGRISKAIETLFD 153
A A + A+ D R+ ++++ R DG + YN + + G++ A+ L +
Sbjct: 118 ATAVTYSALADGYCRVGRLDEARRVVDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDN 177
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M C P V T+N++L + Y + + G N+++ G+C G+
Sbjct: 178 MLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGD 237
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A +L+ P C PN Y+T++ GL G E+ L+ M SE T ++
Sbjct: 238 VDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSV 297
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+IS L ++G + ++LLE+M C N +Y V+ GL ++ A L+ M +
Sbjct: 298 VISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDG 357
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
P+ +Y L+ GLCN + ED + ++ KM Q +P + + I+G
Sbjct: 358 CKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIG 405
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 124/275 (45%), Gaps = 36/275 (13%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+EA +++I+ L Q F +++ K+ K ++ YN + G + A+
Sbjct: 290 PSEATLSVVISSLCQEGLFQRAIRLLE--KMSKHDCTANIVTYNAVVSGLCEQGHVDGAL 347
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +M + C P++ T+N+++ L +A+ + + + + ++ D N ++ L
Sbjct: 348 YLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFL 407
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG----- 263
C+ G A V + P++ C PN TYS+++ GL + G +E++ LL M S+G
Sbjct: 408 CQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEI 467
Query: 264 -----------------------------IDADTVTFNILISGLRKQGKVEEGMKLLERM 294
I V +N ++ GL + GK ++ + +L M
Sbjct: 468 NYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNM 527
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
GC P+ ++Y ++ GL + EA+EL+ +
Sbjct: 528 VSDGCMPDESTYSILIQGLAHEGYMKEARELLSTL 562
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 7/211 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ L A+R++ ED+M ++ D +N I + G +A+
Sbjct: 360 PNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDC--LPDILTFNTIIGFLCQKGLTMQAV 417
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLV-SAKLYGEIQGIYTSAAK-LGVEIDACCLNILLK 206
E MP C P+ T++ V+ L + K+ ++ + +K EI+ ++L +
Sbjct: 418 EVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEIN---YHLLAE 474
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
L E L A ++ + P Y+T++ GLC G ++A +L M S+G
Sbjct: 475 CLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMP 534
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
D T++ILI GL +G ++E +LL + +
Sbjct: 535 DESTYSILIQGLAHEGYMKEARELLSTLSSR 565
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
R S+L+H +G ++ A L +ES D N L+ L ++G+ + +++E
Sbjct: 61 RRLSSLVH----RGELDAA---LRVVESSLCPPDVALANRLVRDLCRRGRPADAARVVE- 112
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
G + +Y + G R EA+ +V M + PS +Y L+H LC +
Sbjct: 113 --ACGSAATAVTYSALADGYCRVGRLDEARRVVDGM---PVLPSAYAYNPLMHALCVRGQ 167
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
V D +L M+ +G P + + ++ G+ R
Sbjct: 168 VRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYR 204
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 170/392 (43%), Gaps = 38/392 (9%)
Query: 36 PSASHQDSDH----HAYKLNHKDW---------LSPTEVLKIFSNL-RDPISVISVLNQY 81
P QD D H++ L H DW L+P V I + +D + + N
Sbjct: 25 PXTKGQDLDFVNVAHSH-LIHSDWKKLTSLSTHLTPFRVKHILLKIQKDHVLSLEFFNWV 83
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE-----------------KLCR 124
+ +++I++ L + ++F + E I++ + V+ ++C
Sbjct: 84 QTENPSSHTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKLFEAILYSYRMCD 143
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
S F ++ K +M + A +T M Y P+V++ N L+ L+
Sbjct: 144 SSPRVFDSLFKTLAHMK-KFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALA 202
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
Y + + + N++++ C++G LE A V +E PN +Y+TL+ G C
Sbjct: 203 FYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYC 262
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
KG + A L M ++G++A+ VTFN LI G K+GK+ E K+ MK PN+
Sbjct: 263 RKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTI 322
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ G + L M + ++Y LI GLC + + +++K++
Sbjct: 323 TYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKEL 382
Query: 365 VQQGFVPRMGMWREIVG--CVTFGKDNRNRVY 394
++ VP + ++ C+ ++N +R +
Sbjct: 383 DKENLVPNASTFSALISGQCI---RNNSDRAF 411
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 2/269 (0%)
Query: 123 CRFSDGFFY-NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
CR S + N++ +G++ KA++ +M S P+ ++N ++ L
Sbjct: 210 CRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNS 269
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
+ S GVE + N L+ G C+ G L A V E N PN TY+TL++
Sbjct: 270 AVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLIN 329
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
G + GN E L E M G+ AD +T+N LI GL K+GK ++ +++ + + P
Sbjct: 330 GHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVP 389
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N++++ ++ G + A +L M+ P+ ++ L+ C + E VL
Sbjct: 390 NASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVL 449
Query: 362 KKMVQQGFVPRMGMWREIV-GCVTFGKDN 389
+M ++ F P + EI G GK++
Sbjct: 450 MEMFERCFTPGSDVLSEIYHGLCCCGKEH 478
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 74/191 (38%), Gaps = 35/191 (18%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A + +M N P+ T+N ++N + +Y ++ GV+ D
Sbjct: 300 GKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTY 359
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQN--------------------------------- 228
N L+ GLC+ G + A Y++ E K+N
Sbjct: 360 NALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVR 419
Query: 229 --CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
C PN +T++ L+ C+ + E AF +L M + + + GL GK
Sbjct: 420 IGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEHL 479
Query: 287 GMKLLERMKGK 297
MKL +K +
Sbjct: 480 AMKLSSELKAR 490
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 141/296 (47%), Gaps = 2/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN Y +I L + + E +++ + E + DG Y + G +
Sbjct: 217 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA--PDGVIYTTLIDGFCKLGNV 274
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S A +M P T+ V+ L E ++ +E D L
Sbjct: 275 SSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTAL 334
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C+ G ++ AF + ++ + PN+ TY+ L GLC+ G V+ A LL M +G+
Sbjct: 335 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 394
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ + T+N L++GL K G +++ +KL++ M+ G +P++ +Y ++ + A E
Sbjct: 395 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHE 454
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ +M+ + P+ V++ L++G C ++ED + +LK M+++G +P + ++
Sbjct: 455 LLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLI 510
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 138/311 (44%), Gaps = 3/311 (0%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
T ++ F L + S + ++ KRK +P+ YT +I L Q R + + +
Sbjct: 262 TTLIDGFCKLGNVSSAYRLFDEMQKRK-ISPDFITYTAVICGLCQTGRVMEADKLFHEMV 320
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
++L D Y + G++ +A M P++ T+ + + L
Sbjct: 321 CKRL--EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 378
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ + G+E++ N L+ GLC+ GN++ A ++ + P+ TY+T
Sbjct: 379 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 438
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
LM C+ + A LL +M + VTFN+L++G G +E+G KLL+ M KG
Sbjct: 439 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 498
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
PN+ +Y ++ + E+ M + + P +Y LI G C + +++
Sbjct: 499 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 558
Query: 359 WVLKKMVQQGF 369
++ + MV +GF
Sbjct: 559 FLHRDMVGKGF 569
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 9/189 (4%)
Query: 192 LGVEIDACCLNILLKGLCENGNL-------EAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
L + +D+C N+ + L E+ + E +++E + +PN TY+ ++ LC
Sbjct: 177 LLISVDSC--NLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLC 234
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ G V EA +L M SEGI D V + LI G K G V +L + M+ + P+
Sbjct: 235 KTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFI 294
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y V+ GL R EA +L M+C+R+ P V+Y LI G C + +++ + +M
Sbjct: 295 TYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM 354
Query: 365 VQQGFVPRM 373
+Q G P +
Sbjct: 355 LQMGLTPNI 363
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A E L +M ++ T+N ++N L A + + G DA
Sbjct: 377 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 436
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ C++ + A +L + + +P V T++ LM+G C G +E+ LL+ M
Sbjct: 437 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 496
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI + T+N LI + + ++ M KG P+ +Y ++ G + E
Sbjct: 497 KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE 556
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
A L M+ + + + SY LI G +K + + ++M ++G V
Sbjct: 557 AWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLV 605
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 2/223 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK N Y ++N L +A D +M+ ++V D Y + +
Sbjct: 391 RKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF--HPDAVTYTTLMDAYCKSRE 448
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A E L M P+V TFN+++N + + + + + + G+ +A N
Sbjct: 449 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 508
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+K C N+ A + + P+ TY+ L+ G C+ N++EA+ L M +G
Sbjct: 509 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 568
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+ ++N LI G K+ K E +L E+M+ +G + Y
Sbjct: 569 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIY 611
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 249 VEEAFGLLERMESEGIDADTVTFNILIS-------GLRKQGKVEEGMKLLERMKGKGCYP 301
V A L ++M + G+ + N+ IS G++ K E +KL+E M+ KG P
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKP 221
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N +Y V+ L + EA+ ++ MI E ++P V Y LI G C V +
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281
Query: 362 KKMVQQGFVP 371
+M ++ P
Sbjct: 282 DEMQKRKISP 291
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 134/277 (48%), Gaps = 4/277 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRISKA 147
PN Y +I+ L + R D D+ + E L + Y + I YG +GR KA
Sbjct: 402 PNLHTYNTLISGLLRVNRLDDALDLFNNM--ETLGVVPTAYTYILFIDFYGK-SGRSDKA 458
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ET M P++ N L L E + I+ G+ D+ N+++K
Sbjct: 459 LETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKC 518
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ G ++ A +L + + CEP++ ++L++ L + G V+EA+ + R++ +
Sbjct: 519 YSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPT 578
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+N LI+GL K+G+V+ M+L M G GC PN+ ++ +L L A +++
Sbjct: 579 VVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLY 638
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+M P +++ +IHGL +K V D W+ +M
Sbjct: 639 KMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM 675
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 150/325 (46%), Gaps = 12/325 (3%)
Query: 54 DWLSPTEVLKIFSNL-------RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKR 106
+ L P+ LK FS L RD +V S+L + + PN YT+ I L +A R
Sbjct: 223 EGLKPS--LKTFSALMVATGKRRDTETVKSLLEEM-ESLGLKPNIYTYTICIRVLGRAGR 279
Query: 107 FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF 166
D IM+R++ + C D Y V+ AG++ A+E M + + P T+
Sbjct: 280 IDEACRIMKRME-DDGCG-PDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTY 337
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
+L+ G ++ ++ G D IL+ LC+ GN++ AF++LD K
Sbjct: 338 ITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRK 397
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
Q PN+ TY+TL+ GL +++A L ME+ G+ T+ + I K G+ ++
Sbjct: 398 QGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDK 457
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
++ E+MK +G PN + LY L + R EAK + R+ ++P V+Y ++
Sbjct: 458 ALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMK 517
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
V++ +L M + P
Sbjct: 518 CYSKAGQVDEAIELLSDMSENQCEP 542
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 140/328 (42%), Gaps = 2/328 (0%)
Query: 53 KDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIED 112
KD ++K+ + + SV +++K P Y +I + +
Sbjct: 752 KDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWN 811
Query: 113 IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
+ +K D F YN++ +G+I++ E M +C P+ T N+++
Sbjct: 812 LFTEMKNAGCA--PDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIAN 869
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
LV + + ++ C LL GL ++G LE A + +E C PN
Sbjct: 870 LVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPN 929
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
Y+ L++G + G+V A L +RM EGI D ++ L+ L + G+V++ + E
Sbjct: 930 NAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFE 989
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
++K G Y +S +Y ++ GL R EA L M ++P +Y LI L
Sbjct: 990 KLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAG 1049
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+VE + +++ G P + + ++
Sbjct: 1050 MVEQAGKLYEELQFIGLEPNVFTYNALI 1077
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 142/291 (48%), Gaps = 2/291 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y L+++ ++ + + + ++ +++ C+ + +N+I + + KA+
Sbjct: 823 PDVFTYNLLLDAHGKSGKINELFELYEQMICSS-CK-PNTITHNIIIANLVKSNSLDKAL 880
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +D+ S + P+ T+ +L+ L+ + E + ++ G + NIL+ G
Sbjct: 881 DLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGF 940
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G++ A + ++ P++++Y++L+ LCE G V++A E+++ G+ D+
Sbjct: 941 GKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDS 1000
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ +N++I GL + ++EE + L + M+ +G P+ +Y ++ L +A +L
Sbjct: 1001 IAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEE 1060
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+ + P+ +Y LI G + V K+M+ G P G + ++
Sbjct: 1061 LQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+LGV+ N L++G N E A+ + E C P+V TY+ L+ + G +
Sbjct: 783 ELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKIN 842
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
E F L E+M +T+T NI+I+ L K +++ + L + P +Y +L
Sbjct: 843 ELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLL 902
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
GLL R EAKEL M+ P+ Y LI+G V + K+MV++G
Sbjct: 903 DGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIR 962
Query: 371 PRMGMWREIVGCV 383
P + + +VGC+
Sbjct: 963 PDLKSYTSLVGCL 975
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 136/306 (44%), Gaps = 12/306 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK--IYGNM 140
K + P+ Y +++K + +++ ++ +DG+ +VI I N
Sbjct: 326 KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEME-------ADGYAPDVITFTILVNA 378
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
AG I +A L M P++ T+N +++ L+ + ++ + LGV
Sbjct: 379 LCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPT 438
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A + + ++G + A ++ + PN+ + ++ L E G + EA +
Sbjct: 439 AYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFN 498
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
R++S G+ D+VT+N+++ K G+V+E ++LL M C P+ ++ L
Sbjct: 499 RLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAG 558
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
R EA ++ R+ +++P+ V+Y LI GL + V+ + M G P +
Sbjct: 559 RVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFN 618
Query: 378 EIVGCV 383
I+ C+
Sbjct: 619 TILDCL 624
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 150/338 (44%), Gaps = 22/338 (6%)
Query: 53 KDWLSPTEVLKIFSNLRDPISVISVLNQYSK-----RKDYNPNEALYTLIINKLAQAKRF 107
K+ LS EV+ + +++ DP S N ++ N L L I++ +
Sbjct: 86 KNALSSKEVMAVLNSILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHR--RVGDM 143
Query: 108 DAIEDIMQRIKVEK-----LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPS 162
+ ++MQ +++ L F F ++ G++ +A F + +Y
Sbjct: 144 VVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAG---FHLNAY----- 195
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
++N +++LL+ + L E +Y G++ + L+ + + E +L+
Sbjct: 196 --SYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLE 253
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
E +PN+ TY+ + L G ++EA +++RME +G D VT+ +LI L G
Sbjct: 254 EMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAG 313
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
K+++ M+L +MK P+ +Y +L D KE M + +P +++
Sbjct: 314 KLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFT 373
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L++ LC +++ +L M +QG +P + + ++
Sbjct: 374 ILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLI 411
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 140/337 (41%), Gaps = 23/337 (6%)
Query: 62 LKIFSNLRDPISVISVLNQYSKRKD---------------YNPNEALYTLIINKLAQAKR 106
+K S+ D ++ I++L+++S D Y P+ +T+++N L +A
Sbjct: 325 MKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGN 384
Query: 107 FDA---IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSV 163
D + D+M++ V + ++++ R+ A++ +M + P+
Sbjct: 385 IDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRV-----NRLDDALDLFNNMETLGVVPTA 439
Query: 164 KTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE 223
T+ L ++ + + + G+ + N L L E G L A + +
Sbjct: 440 YTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNR 499
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283
P+ TY+ +M + G V+EA LL M + D + N LI+ L K G+
Sbjct: 500 LKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGR 559
Query: 284 VEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKK 343
V+E K+ R+K P +Y ++ GL + + A EL M P+ +++
Sbjct: 560 VDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNT 619
Query: 344 LIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ LC V+ +L KM +P + + I+
Sbjct: 620 ILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTII 656
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 12/244 (4%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N +LY+L A+ R + I R+K L D YN++ + AG++ +AIE
Sbjct: 478 NASLYSL-----AEMGRLREAKVIFNRLKSNGLA--PDSVTYNMMMKCYSKAGQVDEAIE 530
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
L DM C P + N ++N L A E ++ + + N L+ GL
Sbjct: 531 LLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLG 590
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G ++ A + C PN T++T++ LC+ V+ A +L +M + D +
Sbjct: 591 KEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVL 650
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL----LDKKRFPEAKEL 325
TFN +I GL + +V + + L +MK K P+ + +L G+ L + F A++
Sbjct: 651 TFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDF 709
Query: 326 VGRM 329
V R+
Sbjct: 710 VHRL 713
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 117/220 (53%), Gaps = 2/220 (0%)
Query: 131 YNVIKIYGN-MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+N++ IYG + + A+E L M YNC P T+N +L+ L G+ + +
Sbjct: 211 FNIV-IYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDM 269
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G+ + NIL+ G C+ G L+ A V++ + N P+V TY+ L++GLC +G +
Sbjct: 270 KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRI 329
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EEAF L + ME+ + D V++N LI+G + K+ E KLLE M KG PN+ ++ +
Sbjct: 330 EEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIM 389
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+ + + +A + +M SP V+Y LI+G C
Sbjct: 390 VKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 140/305 (45%), Gaps = 8/305 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L++ +VI ++ Q + P+ Y ++IN L R + E R ++E L D
Sbjct: 294 LKEAANVIELMTQ----NNLLPDVWTYNMLINGLCNEGRIE--EAFKLRDEMENLKLLPD 347
Query: 128 GFFYNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
YN + I G + +IS+A + L +M P+ T N+++ +
Sbjct: 348 VVSYNTL-INGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI 406
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
T + G D N L+ G C+ GN+ AF +DE ++N + + T +T++ LC +
Sbjct: 407 TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+EEA+ LL G D V++ LI G K G V+ +KL + MK K P++ +Y
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL + +A + ++ + P +Y ++HG C + VE KMV+
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 367 QGFVP 371
F P
Sbjct: 587 NSFKP 591
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 132/280 (47%), Gaps = 10/280 (3%)
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM 154
+L++ +A +R D + + +L S I Y +G+ A + M
Sbjct: 109 SLLLGFIATDRRHDL------HLSILRLTSPSKALLDTAIGAYVQ-SGQPHHAFQIFKKM 161
Query: 155 PSYNCWPSVKTFNLVLNLLV---SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
P++ T N +LN LV S+ + + A KLG+ + NI++ G C
Sbjct: 162 KRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLE 221
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
+ A L+ K NC P+ TY+T++ LC+KG + +A LL M+S G+ + T+
Sbjct: 222 NKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTY 281
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
NIL+ G K G ++E ++E M P+ +Y ++ GL ++ R EA +L M
Sbjct: 282 NILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMEN 341
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ P VSY LI+G + + +L++M ++G P
Sbjct: 342 LKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKP 381
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 9/225 (4%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V TFN+V+ + + K D N +L LC+ G L A +
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDL 265
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + + PN TY+ L++G C+ G ++EA ++E M + D T+N+LI+GL
Sbjct: 266 LMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN 325
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G++EE KL + M+ P+ SY ++ G L+ + EA +L+ M + + P+ V+
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVT 385
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
+ ++ C + ++D + KM + GF P CVT+
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSP---------DCVTY 421
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 148/349 (42%), Gaps = 43/349 (12%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
+D + ++V+ +Y + +P+ Y I++ L + R D++ +K L +
Sbjct: 224 FKDAVEFLNVMGKY----NCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGL--LPN 277
Query: 128 GFFYNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
YN++ +YG G + +A + M N P V T+N+++N L + E +
Sbjct: 278 RNTYNIL-VYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLR 336
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
L + D N L+ G E + AF +L+E ++ +PN T++ ++ C++
Sbjct: 337 DEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKE 396
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG------------------------ 282
G +++A + +ME G D VT+N LI+G K G
Sbjct: 397 GKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTL 456
Query: 283 -----------KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
K+EE KLL + +G + + SY ++ G A +L M
Sbjct: 457 NTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE 516
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + PS V+Y +I GLC E L ++++ G +P + I+
Sbjct: 517 KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTIL 565
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 37/322 (11%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN + +++ + + D + + K+E+ D YN + AG +
Sbjct: 377 KGVKPNAVTHNIMVKWYCKEGKMDDASNTIT--KMEESGFSPDCVTYNTLINGYCKAGNM 434
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID------- 197
+A T+ +M N T N +L L K E + +SA K G ID
Sbjct: 435 GEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTL 494
Query: 198 ----------------------------ACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
N ++ GLC+ G E A L+E +
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
P+ TY+T++HG C +G+VE+AF +M D T NIL+ GL +G +E+ +K
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALK 614
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
L KG ++ +Y ++ L + R +A L+ M + + P +Y +I L
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
+ + + + + KM+++G +P
Sbjct: 675 DSGRIREAEEFMSKMLEKGXLP 696
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 2/247 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK+ + I+ L + K+ + ++ + K F D Y + + G
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR--KRGYFIDEVSYGTLIVGYFKDGN 503
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A++ +M PS T+N ++ L + + G+ D N
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L G C G++E AF ++ + + +P+V T + L+ GLC +G +E+A L S+G
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKG 623
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
DTVT+N LI+ L K+G++++ LL M+ K P+ +Y ++ L D R EA+
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE 683
Query: 324 ELVGRMI 330
E + +M+
Sbjct: 684 EFMSKML 690
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PNV T++ +++G C + ++A L M D VT+N ++ L K+G++ + L
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDL 265
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L MK +G PN +Y ++YG EA ++ M + P +Y LI+GLCN
Sbjct: 266 LMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN 325
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
+ +E+ + +M +P + + ++ GC+ + K
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 27/260 (10%)
Query: 83 KRKDYNPNEALYTLIINKLAQ-AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K K+ P+ Y II L Q K AI + + ++ L D YN I
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLL---PDETTYNTILHGYCRE 571
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + KA + M + P V T N++L L + + ++ + G ID
Sbjct: 572 GDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTY 631
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ LC+ G L+ AF +L E ++ P+ TY+ ++ L + G + EA + +M
Sbjct: 632 NTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLE 691
Query: 262 EG--------IDAD---------------TVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
+G +D + +V ++ I L +GK ++ M++ K KG
Sbjct: 692 KGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKG 751
Query: 299 CYPNSASYQEVLYGLLDKKR 318
+ ++Y ++ GL+ +++
Sbjct: 752 ITVDKSTYINLMDGLIKRRK 771
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 141/296 (47%), Gaps = 2/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN Y +I L + + E +++ + E + DG Y + G +
Sbjct: 317 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA--PDGVIYTTLIDGFCKLGNV 374
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S A +M P T+ V+ L E ++ +E D L
Sbjct: 375 SSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTAL 434
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C+ G ++ AF + ++ + PN+ TY+ L GLC+ G V+ A LL M +G+
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 494
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ + T+N L++GL K G +++ +KL++ M+ G +P++ +Y ++ + A E
Sbjct: 495 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHE 554
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ +M+ + P+ V++ L++G C ++ED + +LK M+++G +P + ++
Sbjct: 555 LLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLI 610
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 2/282 (0%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N A Y +I + L Q R ++ ++++ D Y+ + G + + ++
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGC--IPDVISYSTVINGYCQVGELQRVLK 309
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+ +M P+ T+N V+ LL E + + G+ D L+ G C
Sbjct: 310 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 369
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ GN+ +A+ + DE K+ P+ TY+ ++ GLC+ G V EA L M + ++ D V
Sbjct: 370 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 429
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+ LI G K+GK++E L +M G PN +Y + GL A EL+ M
Sbjct: 430 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 489
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + + +Y L++GLC ++ ++K M GF P
Sbjct: 490 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHP 531
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 3/290 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD+ + ++ + L +A D + ++ L D + + ++ G I
Sbjct: 176 KDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDG-I 234
Query: 145 SKAIETLFDMPSYN-CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
A++ + P CW + ++N++ + L E + G D +
Sbjct: 235 KIALKVFVEFPEVGVCW-NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYST 293
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G C+ G L+ +++E + +PN TY+ ++ LC+ G V EA +L M SEG
Sbjct: 294 VINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG 353
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D V + LI G K G V +L + M+ + P+ +Y V+ GL R EA
Sbjct: 354 IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEAD 413
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+L M+C+R+ P V+Y LI G C + +++ + +M+Q G P +
Sbjct: 414 KLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 463
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 138/311 (44%), Gaps = 3/311 (0%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
T ++ F L + S + ++ KRK +P+ YT +I L Q R + + +
Sbjct: 362 TTLIDGFCKLGNVSSAYRLFDEMQKRK-ISPDFITYTAVICGLCQTGRVMEADKLFHEMV 420
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
++L D Y + G++ +A M P++ T+ + + L
Sbjct: 421 CKRL--EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 478
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ + G+E++ N L+ GLC+ GN++ A ++ + P+ TY+T
Sbjct: 479 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 538
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
LM C+ + A LL +M + VTFN+L++G G +E+G KLL+ M KG
Sbjct: 539 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 598
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
PN+ +Y ++ + E+ M + + P +Y LI G C + +++
Sbjct: 599 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 658
Query: 359 WVLKKMVQQGF 369
++ + MV +GF
Sbjct: 659 FLHRDMVGKGF 669
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A E L +M ++ T+N ++N L A + + G DA
Sbjct: 477 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 536
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ C++ + A +L + + +P V T++ LM+G C G +E+ LL+ M
Sbjct: 537 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 596
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI + T+N LI + + ++ M KG P+ +Y ++ G + E
Sbjct: 597 KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE 656
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
A L M+ + + + SY LI G +K + + ++M ++G V
Sbjct: 657 AWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLV 705
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 2/223 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK N Y ++N L +A D +M+ ++V D Y + +
Sbjct: 491 RKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF--HPDAVTYTTLMDAYCKSRE 548
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A E L M P+V TFN+++N + + + + + + G+ +A N
Sbjct: 549 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 608
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+K C N+ A + + P+ TY+ L+ G C+ N++EA+ L M +G
Sbjct: 609 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 668
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+ ++N LI G K+ K E +L E+M+ +G + Y
Sbjct: 669 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIY 711
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 122/247 (49%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 68 SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 127
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 128 FNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 187
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PNS ++ ++ G R
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVD 247
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 307
Query: 381 -GCVTFG 386
GC G
Sbjct: 308 DGCCKDG 314
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 126 YFFNILMHRFCKDGDIRIA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 182
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 183 KSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCK 242
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 243 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKIT 302
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G A E RMI E V Y LI GLC + D + +L++M+
Sbjct: 303 YTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREML 362
Query: 366 QQGFVPRMGMWREIV 380
G P + I+
Sbjct: 363 SVGLKPDARTYTMII 377
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 109/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ ++ L+ G C+NG ++ A +
Sbjct: 193 PDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEI 252
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G K
Sbjct: 253 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCK 312
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++ + +RM + + Y ++ GL + +A++++ M+ + P +
Sbjct: 313 DGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDART 372
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 373 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 403
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 39/261 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISK 146
P+ Y+++IN L + + D ++ + V+ L S F I G+ GR+
Sbjct: 192 QPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTF---TTLIDGHCKNGRVDL 248
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+E M S + P + T+N L+
Sbjct: 249 AMEIYKQMLSQSLSPDLITYN-----------------------------------TLIY 273
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ G+L+ A +++DE + +P+ TY+TL+ G C+ G+++ AF +RM E
Sbjct: 274 GLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRL 333
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D V + LISGL ++G + K+L M G P++ +Y ++ K + +L+
Sbjct: 334 DDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 393
Query: 327 GRMICERMSPSFVSYKKLIHG 347
M + PS V+Y L++G
Sbjct: 394 KEMQRDGHVPSVVTYNVLMNG 414
>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 139/296 (46%), Gaps = 10/296 (3%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q K + PN +Y +I+ L + + +M + VE SD F +I Y
Sbjct: 103 LLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEM-VEP----SDVTFNVLISAY 157
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+ +A+ L S P V T V+ +L A E + +G +D
Sbjct: 158 CQEENLV-QALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVD 216
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+KG C G + VL + + C PNV TY+ L G C+ G ++ A L
Sbjct: 217 VVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFN 276
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK--GCYPNSASYQEVLYGLLD 315
M+++GI+ + +T++ LI GL G++E+G K+LE M+ G + Y ++YGL
Sbjct: 277 DMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYK 336
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K +F EA E + +M E++ P V I G CN+ + D V +M+++G VP
Sbjct: 337 KNQFEEALEFLTKM--EKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVP 390
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C G++ A V D+ K+ P+V Y L+HG C+ GNV EAF L+ M G
Sbjct: 366 GFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFP 425
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
TFN LIS QGKV +KL+E M G+GC P+ SY ++ L +K F +A L
Sbjct: 426 TAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLF 485
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
+M+ + + P + ++ ++ LC L ++ W+
Sbjct: 486 LQMVEKDILPDYSTWNSML--LC---LTQETVWL 514
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 139/297 (46%), Gaps = 10/297 (3%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
+R I V+ ++ ++ + NP+ ++ I++ L + A E +++ + + D
Sbjct: 27 VRQMIKVLDLITKFGE----NPSLKIFNSILDVLVKEDIDLAREFYRKKMMMNGVS--GD 80
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+ + ++ + RI A + L M S P+ +N +++ L G + +
Sbjct: 81 DYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMN 140
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
VE N+L+ C+ NL A +L++ P+V T + ++ LC+ G
Sbjct: 141 EM----VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAG 196
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V E +LER+ES G D V +N LI G GK + G ++L+ M+ KGC PN +Y
Sbjct: 197 RVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYN 256
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+ G D A +L M + ++ +F++Y LI GLC+ +ED +L+ M
Sbjct: 257 ILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELM 313
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 6/216 (2%)
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC-EKGN 248
+ +G D +++GL + VLD K P+++ +++++ L E +
Sbjct: 3 SSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDID 62
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ F ++M G+ D TF IL+ GL ++ + KLL+ MK +G PN+ Y
Sbjct: 63 LAREF-YRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNT 121
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+++ L + A+ L+ M+ PS V++ LI C ++ + +L+K G
Sbjct: 122 MIHALCKNGKVGRARSLMNEMV----EPSDVTFNVLISAYCQEENLVQALVLLEKSFSMG 177
Query: 369 FVPRMGMWREIVGCVTFGKDNRNRVYVTETVDSLAS 404
FVP + ++VG + V V E V+S+
Sbjct: 178 FVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGG 213
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 11/257 (4%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGF 129
S I + N K N N Y +I L R + I ++M+ + R S
Sbjct: 270 SAIDLFNDM-KTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISP-- 326
Query: 130 FYNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
YN I IYG + +A+E L M +P +L + + G+ + +Y
Sbjct: 327 -YNSI-IYGLYKKNQFEEALEFLTKMEKL--FPRAVDRSLRILGFCNEGSIGDAKRVYDQ 382
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
K G L+ G C++GN+ AF +++E P T++ L+ C +G
Sbjct: 383 MIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGK 442
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V A L+E M G D +++ ++ L +G ++ ++L +M K P+ +++
Sbjct: 443 VGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNS 502
Query: 309 VLYGLLDKKRFPEAKEL 325
+L L + + E L
Sbjct: 503 MLLCLTQETVWLEGDNL 519
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 137/294 (46%), Gaps = 12/294 (4%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-- 140
K + P+ Y +++ + ++ E+++Q + F G V+ +
Sbjct: 103 KELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEM-------FEKGLAPCVVTCTAVINA 155
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
GR+S A+ L M C P+V T+N ++ + + + GV D
Sbjct: 156 YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPD 215
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A N+L++G C +G++E+AF +L + TY+ L++ LC+ G ++A L +
Sbjct: 216 AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFD 275
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+E+ GI + VTFN LI+GL K GK + K LE+M GC P++ +Y + L K
Sbjct: 276 SLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK 335
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E +G M+ + + PS V+Y +IH L ++ V +MV G P
Sbjct: 336 GSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 389
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 8/279 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y +I L +A R D ++ + + + ++K N A R + + L
Sbjct: 48 YATLIEGLCEAGRIDEAVELFGEMDQPDM-----HMYAALVKGLCN-AERGEEGLLMLRR 101
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M PS + + V++ + E + + + G+ ++ C+ G
Sbjct: 102 MKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGR 161
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A VL+ + C+PNV TY+ L+ G C +G V +A LL +M + G++ D VT+N+
Sbjct: 162 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 221
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G G +E +LL M+G G + +Y ++ L R +A L +
Sbjct: 222 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 281
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDW-VLKKMVQQGFVP 371
+ P+ V++ LI+GLC D+ W L+KMV G P
Sbjct: 282 IKPNAVTFNSLINGLCKSGKA-DIAWKFLEKMVSAGCTP 319
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 128/284 (45%), Gaps = 2/284 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ +Y ++ L A+R + E ++ ++++L Y + + + +A
Sbjct: 73 QPDMHMYAALVKGLCNAERGE--EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEA 130
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L +M P V T V+N + + G + + N L++G
Sbjct: 131 EEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG 190
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C G + A +L++ P+ TY+ L+ G C G++E AF LL ME +G+ AD
Sbjct: 191 FCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIAD 250
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+N LI+ L K G+ ++ L + ++ +G PN+ ++ ++ GL + A + +
Sbjct: 251 QYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLE 310
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+M+ +P +Y I LC K ++ + +M+Q+ P
Sbjct: 311 KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 354
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 136/292 (46%), Gaps = 18/292 (6%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P T +IN + R +++ +K+ + C+ + + +++ + N G++
Sbjct: 140 KGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKL-RGCKPNVWTYNALVQGFCN-EGKV 197
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE-IQGIYTSAAKL-------GVEI 196
KA+ L M + P T+NL++ G+ I G SA +L G+
Sbjct: 198 HKAMTLLNKMRACGVNPDAVTYNLLIR--------GQCIDGHIESAFRLLRLMEGDGLIA 249
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ LC++G + A + D + +PN T+++L++GLC+ G + A+ L
Sbjct: 250 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFL 309
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E+M S G DT T++ I L K +EG+ + M K P++ +Y V++ LL +
Sbjct: 310 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 369
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ + G M+ +P V+Y + C + + + + VL +M + G
Sbjct: 370 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 421
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 124/305 (40%), Gaps = 8/305 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS- 126
+ D + V+ ++ K + PN Y ++ + ++ +++ C +
Sbjct: 162 MSDALRVLELM----KLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA---CGVNP 214
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN++ + G I A L M T+N ++N L + ++
Sbjct: 215 DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLF 274
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S G++ +A N L+ GLC++G + A+ L++ C P+ TYS+ + LC+
Sbjct: 275 DSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 334
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+E + M + + TV + I+I L K+ + M GC P+ +Y
Sbjct: 335 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 394
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+ + R EA+ ++ M ++ ++Y L+ G + + +LK+M
Sbjct: 395 TTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS 454
Query: 367 QGFVP 371
VP
Sbjct: 455 VASVP 459
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 118/308 (38%), Gaps = 59/308 (19%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G+ A + L M S C P T++ + L K+ G +G+ L ++
Sbjct: 299 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHL--CKMKGSQEGLSFIGEMLQKDVKPST 356
Query: 201 LN--ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+N I++ L + N E C P+V TY+T M C +G + EA +L
Sbjct: 357 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLME 416
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP----------------- 301
M G+ DT+ +N L+ G G+ + + +L++M P
Sbjct: 417 MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRL 476
Query: 302 -----------------------------------NSASYQEVLYGLLDKKRFPEAKELV 326
NS +Y +L G + R EA LV
Sbjct: 477 VEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLV 536
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK-KMVQQGFVPRMGMWREIV-GCVT 384
M + +S + Y L+ C K D WVL M+Q GF+P++ ++ ++ G +
Sbjct: 537 SLMKEDSISLNEDIYTALVTCFCKSKRYLDA-WVLVCSMIQHGFIPQLMSYQHLLSGLIC 595
Query: 385 FGKDNRNR 392
G+ ++ +
Sbjct: 596 EGQTDKAK 603
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 101/261 (38%), Gaps = 18/261 (6%)
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
T +M S C P V T+ + E + + +K GV +D N L+ G
Sbjct: 378 TWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHA 437
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA----------------- 252
G + A +L + PN TY L+ L VE+
Sbjct: 438 SIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDV 497
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
FGL + M+ ++ T++ ++ G + G+ EE L+ MK N Y ++
Sbjct: 498 FGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTC 557
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
KR+ +A LV MI P +SY+ L+ GL + + + + + P
Sbjct: 558 FCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPD 617
Query: 373 MGMWREIV-GCVTFGKDNRNR 392
+W+ I+ G + G + +R
Sbjct: 618 EIVWKVIIDGLIKKGHSDISR 638
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 20/261 (7%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NP+ YT + R + E+++ +++ K D YN + G+ A
Sbjct: 388 NPDVVTYTTSMRAYCIEGRLNEAENVL--MEMSKNGVTVDTMAYNTLMDGHASIGQTDHA 445
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M S P+ T+ ++L LV +L ++ + + +E
Sbjct: 446 VSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIE------------ 493
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L F + D K PN TYS+++ G E G EEA L+ M+ + I +
Sbjct: 494 ------LTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLN 547
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+ L++ K + + L+ M G P SYQ +L GL+ + + +AKE+
Sbjct: 548 EDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFM 607
Query: 328 RMICERMSPSFVSYKKLIHGL 348
+ SP + +K +I GL
Sbjct: 608 NSRWKDYSPDEIVWKVIIDGL 628
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G D TFN LI G + +V+ L ++M +G + SY ++ GL + R
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
EA EL G M P Y L+ GLCN + E+ +L++M + G+ P +
Sbjct: 61 IDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 379 IV 380
+V
Sbjct: 117 VV 118
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 160/339 (47%), Gaps = 34/339 (10%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYN------------------PNEALYTLIINK 100
T +L ++RD +S +VL +R ++ PN YT+++
Sbjct: 65 TSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRA 124
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AGRISKAIETLFDM 154
L + D +++ ++ S G +V+ YG + A + KA+E + +M
Sbjct: 125 LCADRLADQAVGLLRSMR-------SAGVRADVVT-YGTLIRGLCDAAEVDKAVELMGEM 176
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
P+V ++ +L + + ++ ++ ++ G+E D L+ LC+ G
Sbjct: 177 CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A V+D ++ EPNV TY+ L++ +C++G+V+EA G+L++M +G+ D VT+N L
Sbjct: 237 KKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296
Query: 275 ISGLRKQGKVEEGMKLLERM-KGKGCY-PNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
I GL +++E M LLE M +GK PN ++ V+ GL D R +A ++ M
Sbjct: 297 IKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEET 356
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ V+Y LI GL V ++ +M G P
Sbjct: 357 GCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEP 395
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDI---MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PN +Y+ ++ ++ R++ + + M +E G ++ K+ G+
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV-----GKAK 237
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KA + M P+V T+N+++N + E G+ ++ GV D N L+
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297
Query: 206 KGLCENGNLEAAFYVLDEF--PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
KGL + ++ A ++L+E K +PNV T+++++ GLC+ G + +AF + ME G
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+N+LI GL + KV + M+L++ M G P+S +Y ++ G + A+
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAE 417
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+L+ M + P Y L+ +C Q ++E
Sbjct: 418 DLLSTMRDRGIEPELFHYIPLLVAMCEQGMME 449
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 11/292 (3%)
Query: 85 KDYNPNEALYTLIIN---KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K P+ +YT +I+ K+ +AK+ + D+M R +E + YNV+
Sbjct: 214 KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP-----NVVTYNVLINCMCKE 268
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA--AKLGVEIDAC 199
G + +AI L M P V T+N ++ L E + K V+ +
Sbjct: 269 GSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVV 328
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N +++GLC+ G + AF V + C N+ TY+ L+ GL V +A L++ M
Sbjct: 329 TFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM 388
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S G++ D+ T++ILI G K +V+ LL M+ +G P Y +L + ++
Sbjct: 389 TSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMM 448
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A+ L M V+Y +IHG C ++ +LK +V +G P
Sbjct: 449 ERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTP 499
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 3/190 (1%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEF---PKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
DA N +L LC G+ + A +L P C PN +Y+ LM LC ++A
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
GLL M S G+ AD VT+ LI GL +V++ ++L+ M G PN Y +L G
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
R+ + ++ M + + P V Y LI LC + V+ MV++G P +
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255
Query: 374 GMWREIVGCV 383
+ ++ C+
Sbjct: 256 VTYNVLINCM 265
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 92/184 (50%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+A +L++ LC + + A +L +V TY TL+ GLC+ V++A L+
Sbjct: 114 NAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELM 173
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M GI+ + V ++ L+ G K G+ E+ K+ M KG P+ Y ++ L
Sbjct: 174 GEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV 233
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ +A ++ M+ + P+ V+Y LI+ +C + V++ VLKKM ++G P + +
Sbjct: 234 GKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTY 293
Query: 377 REIV 380
++
Sbjct: 294 NTLI 297
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 134/297 (45%), Gaps = 39/297 (13%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRFSDGFFYNV 133
I VL + S+ K P+ Y +I L+ D A+ + + ++ + + + + F +V
Sbjct: 275 IGVLKKMSE-KGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSV 333
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
I+ ++ GR+ +A + M C ++ T+NL++ L+ + + LG
Sbjct: 334 IQGLCDI-GRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392
Query: 194 VEIDACCLNILLKG-----------------------------------LCENGNLEAAF 218
+E D+ +IL+KG +CE G +E A
Sbjct: 393 LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERAR 452
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ +E N +V YST++HG C+ G+++ A LL+ + EG+ D VT++I+I+
Sbjct: 453 NLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMF 511
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
K G +E +L++M G P+ A + ++ G K + EL+ MI + ++
Sbjct: 512 AKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIA 568
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 89/206 (43%), Gaps = 6/206 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++I + + D ED++ ++ + + F Y + + G + +A
Sbjct: 395 PDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI--EPELFHYIPLLVAMCEQGMMERA- 451
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
LF+ N V ++ +++ A + + S G+ DA +I++
Sbjct: 452 RNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMF 511
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
++G++EAA VL + P+V + +L+ G KG + + L+ M ++ I D+
Sbjct: 512 AKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDS 571
Query: 269 VTFNILISGLRKQGKVEEGMKLLERM 294
+ L + L EG LL+ +
Sbjct: 572 KIISTLSTSLVAS---NEGKALLQSL 594
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 150/335 (44%), Gaps = 22/335 (6%)
Query: 51 NHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKR---------------KDYNPNEALYT 95
N K +LS E +F D ++ +++N Y ++ K P Y
Sbjct: 115 NTKSFLSDMEEKGVFP---DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 171
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD-M 154
IIN L + ++ + ++ + K+ D YN++ + + A E +FD M
Sbjct: 172 AIINGLCKTGKYLRAKGVLDEML--KIGMSPDTATYNILLVECCRNDNMMDA-ERIFDEM 228
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
PS P + +F+ ++ LL + + G+ D IL+ G C NG +
Sbjct: 229 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 288
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
A V DE +Q C +V TY+T+++GLC++ + EA L M G+ D TF L
Sbjct: 289 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 348
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I+G K G + + + L E M + P+ +Y ++ G + EL MI R+
Sbjct: 349 INGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 408
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
P+ +SY LI+G CN V + + +MV++GF
Sbjct: 409 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGF 443
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 135/290 (46%), Gaps = 4/290 (1%)
Query: 93 LYTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET 150
+YTL +IN L + ++ + + + +E+ F D YN + G + +A E
Sbjct: 97 VYTLNIMINALCKNQKIENTKSFLS--DMEEKGVFPDVVTYNTLINAYCRQGLLEEAFEL 154
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
+ M P V T+N ++N L Y +G+ K+G+ D NILL C
Sbjct: 155 MDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCR 214
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
N N+ A + DE P Q P++ ++S L+ L + G +++A M++ G+ D V
Sbjct: 215 NDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 274
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ ILI G + G + E +K+ + M +GC + +Y +L GL +K EA EL M
Sbjct: 275 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMT 334
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P F ++ LI+G + + + M+Q+ P + + ++
Sbjct: 335 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLI 384
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 135/279 (48%), Gaps = 4/279 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y I+N L + K +++ + + F D + + + + G ++KA+ TLF+
Sbjct: 310 YNTILNGLCKEKMLSEADELFTEMTERGV--FPDFYTFTTLINGYSKDGNMNKAV-TLFE 366
Query: 154 MP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M N P V T+N +++ ++ ++ + + IL+ G C G
Sbjct: 367 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG 426
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+ AF + DE ++ E + T +T++ G C GN +A L M +GI D +T+N
Sbjct: 427 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 486
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
LI+G K+ ++ L+ +M+ G P+ +Y +L G + R EA+ ++ +MI
Sbjct: 487 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 546
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++P +Y LI+G Q +++ V +M+Q+GFVP
Sbjct: 547 GVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 4/229 (1%)
Query: 158 NCWPSVKTFNLVLNLLVSA-KLYGEIQGIYTSAAK-LGVEIDACCLNILLKGLCENGNLE 215
NC + F+L++ V A KL + +K L V I+AC N LL GL + G ++
Sbjct: 22 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINAC--NSLLGGLVKVGWVD 79
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A+ + E + + NV T + +++ LC+ +E L ME +G+ D VT+N LI
Sbjct: 80 LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 139
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+ +QG +EE +L++ M GKG P +Y ++ GL ++ AK ++ M+ MS
Sbjct: 140 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 199
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
P +Y L+ C + D + + +M QG VP + + ++G ++
Sbjct: 200 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLS 248
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 122/274 (44%), Gaps = 35/274 (12%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +S+A++ +M C V T+N +LN L K+ E ++T + GV D
Sbjct: 286 GVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 345
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK--------------- 246
L+ G ++GN+ A + + ++N +P+V TY+TL+ G C+
Sbjct: 346 TTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS 405
Query: 247 --------------------GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
G V EAF L + M +G +A +T N ++ G + G +
Sbjct: 406 RRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK 465
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+ L M KG P+ +Y ++ G + ++ A LV +M + P ++Y +++
Sbjct: 466 ADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILN 525
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
G Q +++ + ++ KM+++G P + ++
Sbjct: 526 GFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 559
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A ++ + E + S S+ N +L LV IY + GV+++
Sbjct: 40 ARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYT 99
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
LNI++ LC+N +E L + ++ P+V TY+TL++ C +G +EEAF L++ M
Sbjct: 100 LNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 159
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G+ T+N +I+GL K GK +L+ M G P++A+Y +L
Sbjct: 160 GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMM 219
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A+ + M + + P VS+ LI L ++ + M G P ++ ++
Sbjct: 220 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 279
Query: 381 G 381
G
Sbjct: 280 G 280
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 109/249 (43%), Gaps = 19/249 (7%)
Query: 70 DPISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIM 114
D + +++N YSK + N P+ Y +I+ + + + ++
Sbjct: 341 DFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW 400
Query: 115 QRIKVEKLCRFSDGFFYNV-IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ ++ + + Y + I Y NM G +S+A +M ++ T N ++
Sbjct: 401 NDMISRRI--YPNHISYGILINGYCNM-GCVSEAFRLWDEMVEKGFEATIITCNTIVKGY 457
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
A + ++ G+ D N L+ G + N++ AF ++++ P+V
Sbjct: 458 CRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDV 517
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY+ +++G +G ++EA ++ +M G++ D T+ LI+G Q ++E ++ +
Sbjct: 518 ITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDE 577
Query: 294 MKGKGCYPN 302
M +G P+
Sbjct: 578 MLQRGFVPD 586
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 137/294 (46%), Gaps = 12/294 (4%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-- 140
K + P+ Y +++ + ++ E+++Q + F G V+ +
Sbjct: 281 KELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEM-------FEKGLAPCVVTCTAVINA 333
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
GR+S A+ L M C P+V T+N ++ + + + GV D
Sbjct: 334 YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPD 393
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A N+L++G C +G++E+AF +L + TY+ L++ LC+ G ++A L +
Sbjct: 394 AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFD 453
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+E+ GI + VTFN LI+GL K GK + K LE+M GC P++ +Y + L K
Sbjct: 454 SLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK 513
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E +G M+ + + PS V+Y +IH L ++ V +MV G P
Sbjct: 514 GSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 567
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 8/279 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y +I L +A R D ++ + + + ++K N A R + + L
Sbjct: 226 YATLIEGLCEAGRIDEAVELFGEMDQPDM-----HMYAALVKGLCN-AERGEEGLLMLRR 279
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M PS + + V++ + E + + + G+ ++ C+ G
Sbjct: 280 MKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGR 339
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A VL+ + C+PNV TY+ L+ G C +G V +A LL +M + G++ D VT+N+
Sbjct: 340 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 399
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G G +E +LL M+G G + +Y ++ L R +A L +
Sbjct: 400 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDW-VLKKMVQQGFVP 371
+ P+ V++ LI+GLC D+ W L+KMV G P
Sbjct: 460 IKPNAVTFNSLINGLCKSGKA-DIAWKFLEKMVSAGCTP 497
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 128/284 (45%), Gaps = 2/284 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ +Y ++ L A+R + E ++ ++++L Y + + + +A
Sbjct: 251 QPDMHMYAALVKGLCNAERGE--EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEA 308
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L +M P V T V+N + + G + + N L++G
Sbjct: 309 EEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG 368
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C G + A +L++ P+ TY+ L+ G C G++E AF LL ME +G+ AD
Sbjct: 369 FCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIAD 428
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+N LI+ L K G+ ++ L + ++ +G PN+ ++ ++ GL + A + +
Sbjct: 429 QYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLE 488
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+M+ +P +Y I LC K ++ + +M+Q+ P
Sbjct: 489 KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 532
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 135/292 (46%), Gaps = 18/292 (6%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P T +IN + R +++ +K+ C+ + + +++ + N G++
Sbjct: 318 KGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG-CKPNVWTYNALVQGFCN-EGKV 375
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE-IQGIYTSAAKL-------GVEI 196
KA+ L M + P T+NL++ G+ I G SA +L G+
Sbjct: 376 HKAMTLLNKMRACGVNPDAVTYNLLIR--------GQCIDGHIESAFRLLRLMEGDGLIA 427
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ LC++G + A + D + +PN T+++L++GLC+ G + A+ L
Sbjct: 428 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFL 487
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E+M S G DT T++ I L K +EG+ + M K P++ +Y V++ LL +
Sbjct: 488 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 547
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ + G M+ +P V+Y + C + + + + VL +M + G
Sbjct: 548 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 599
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 102/245 (41%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN++ + G I A L M T+N ++N L + ++
Sbjct: 393 DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLF 452
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S G++ +A N L+ GLC++G + A+ L++ C P+ TYS+ + LC+
Sbjct: 453 DSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 512
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+E + M + + TV + I+I L K+ + M GC P+ +Y
Sbjct: 513 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 572
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+ + R EA+ ++ M ++ ++Y L+ G + + +LK+M
Sbjct: 573 TTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS 632
Query: 367 QGFVP 371
VP
Sbjct: 633 VASVP 637
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 4/170 (2%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +++ LC +L A L + P+ T+++L+ G C V+ A L ++M
Sbjct: 157 NAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPL 216
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D V++ LI GL + G+++E ++L M P+ Y ++ GL + +R E
Sbjct: 217 RGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEE 272
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ RM PS +Y ++ C ++ ++ + +L++M ++G P
Sbjct: 273 GLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAP 322
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P TY+ ++ LC + ++ A L M G D TFN LI G + +V+ L
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
++M +G + SY ++ GL + R EA EL G M P Y L+ GLCN
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCN 266
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ E+ +L++M + G+ P + +V
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVV 296
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 134/355 (37%), Gaps = 61/355 (17%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y +IN L + R D + ++ + + +N + +G+ A + L
Sbjct: 432 YNALINALCKDGRTDQACSLFDSLETRGI--KPNAVTFNSLINGLCKSGKADIAWKFLEK 489
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN--ILLKGLCEN 211
M S C P T++ + L K+ G +G+ L ++ +N I++ L +
Sbjct: 490 MVSAGCTPDTYTYSSFIEHL--CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 547
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
N E C P+V TY+T M C +G + EA +L M G+ DT+ +
Sbjct: 548 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAY 607
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYP------------------------------ 301
N L+ G G+ + + +L++M P
Sbjct: 608 NTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVW 667
Query: 302 ----------------------NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
NS +Y +L G + R EA LV M + +S +
Sbjct: 668 KAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNED 727
Query: 340 SYKKLIHGLCNQKLVEDVDWVLK-KMVQQGFVPRMGMWREIV-GCVTFGKDNRNR 392
Y L+ C K D WVL M+Q GF+P++ ++ ++ G + G+ ++ +
Sbjct: 728 IYTALVTCFCKSKRYLDA-WVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAK 781
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 119/327 (36%), Gaps = 55/327 (16%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+KD P+ YT++I+KL + + + V + +G M
Sbjct: 527 QKDVKPSTVNYTIVIHKLLKERNYGL-----------------------VARTWGEMV-- 561
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
S C P V T+ + E + + +K GV +D N
Sbjct: 562 ------------SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 609
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA----------- 252
L+ G G + A +L + PN TY L+ L VE+
Sbjct: 610 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKA 669
Query: 253 ------FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
FGL + M+ ++ T++ ++ G + G+ EE L+ MK N Y
Sbjct: 670 IELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIY 729
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ KR+ +A LV MI P +SY+ L+ GL + + +
Sbjct: 730 TALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRW 789
Query: 367 QGFVPRMGMWREIV-GCVTFGKDNRNR 392
+ + P +W+ I+ G + G + +R
Sbjct: 790 KDYSPDEIVWKVIIDGLIKKGHSDISR 816
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 120/269 (44%), Gaps = 12/269 (4%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG--- 142
D P+ YT +IN + D + G NV+ +A
Sbjct: 194 DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM-------LDRGILPNVVTYSSIIAALCK 246
Query: 143 --RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ KA+E L M P+ +T+N +++ S+ E G GVE D
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ LC+NG A + D K+ +P + TY TL+ G KG + E GLL+ M
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI + F+ILI KQGKV++ M + +M+ +G P++ +Y V+ L R
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLC 349
+A +MI ER+SP + Y LIH LC
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 136/300 (45%), Gaps = 3/300 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + + +T ++ L KR DI+ R ++ +L + F YN++ R
Sbjct: 119 KKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLR-RMTQLGCIPNVFSYNILLKGLCDDNR 177
Query: 144 ISKAIETLFDMP--SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+A+E L MP +C P V ++ V+N + G Y G+ +
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ LC+ ++ A VL K PN RTY++++HG C G +EA G L++M S
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G++ D VT+N L+ L K G+ E K+ + M +G P +Y +L G K E
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
L+ M+ + P+ + LI Q V+ V KM QQG P + ++G
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 23/329 (6%)
Query: 70 DPISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFD-AIEDI 113
D +S +V+N + K D + PN Y+ II L +A+ D A+E +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 114 MQRIK--VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+K V CR YN I +G+ +AI L M S P V T+N +++
Sbjct: 258 TSMVKNGVMPNCRT-----YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L E + ++ S K G++ + LL+G G L +LD + P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N +S L+ ++G V++A + +M +G++ DTVT+ +I L K G+VE+ M+
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E+M + P + Y +++ L ++ +AKEL+ M+ + + + +I C +
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V + + + MV+ G P + + ++
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLI 521
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 2/273 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +PN +++++I A+ + D + +++ + L D Y + +GR
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL--NPDTVTYGTVIGILCKSGR 424
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ M P +N +++ L + + + + G+ +D N
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C+ G + + + D + +P++ TYSTL+ G C G ++EA LL M S G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D VT+N LI+G K ++E+ + L M+ G P+ +Y +L GL +R AK
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
EL + +Y ++HGLC L ++
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDE 637
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 127/294 (43%), Gaps = 4/294 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P +Y +I+ L ++D ++++ + +C D F+N I GR+ ++
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL--DTIFFNSIIDSHCKEGRVIES 498
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E LFD M P + T++ +++ A E + S +G++ D N L+
Sbjct: 499 -EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+ +E A + E P++ TY+ ++ GL + A L + G
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T+NI++ GL K +E +++ + + + ++ ++ LL R EAK+L
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P +Y + L Q L+E++D + M + G M IV
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PN+ TY LM C G ++ F L + +G D + F ++ GL + + M +
Sbjct: 89 PNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDI 148
Query: 291 -LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE--RMSPSFVSYKKLIHG 347
L RM GC PN SY +L GL D R EA EL+ M + P VSY +I+G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ ++ +M+ +G +P + + I+ +
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAAL 244
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A+ +M S P + T+N++L L + + +Y + G +++ N
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I+L GLC+N + A + + + RT++ ++ L + G +EA L + +
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D T++++ L +QG +EE L M+ GC NS ++ LL + A
Sbjct: 684 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 138/293 (47%), Gaps = 5/293 (1%)
Query: 80 QYSKRKD---YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
Q KR D PN +Y +II+ + +AK + D+ ++ +++C D F YN +
Sbjct: 187 QLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRIC--PDVFTYNALIS 244
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ +++ AI+ M N P+V TFN++++ + + + K ++
Sbjct: 245 GFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKP 304
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ G C + A + D NV+ Y+T+++G C+ V+EA L
Sbjct: 305 DVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLF 364
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E M I + VT++ LI GL K G++ +KL++ M +G PN +Y +L L
Sbjct: 365 EEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKN 424
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+A L+ + + + P +Y LI GLC +ED V + ++ +G+
Sbjct: 425 HHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGY 477
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 118/238 (49%), Gaps = 3/238 (1%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
N P FN +L+ LV AK + ++ G+E D NIL+ + G +
Sbjct: 56 NPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLS 115
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
F + + K+ P T++TL+ GLC KG++ +A +++ ++G D V++ LI+G
Sbjct: 116 FSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLING 175
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L K G++ ++LL+R+ GK PN+ Y ++ + K +A +L +M+ +R+ P
Sbjct: 176 LCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPD 235
Query: 338 FVSYKKLIHGLCN-QKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRV 393
+Y LI G KL +D + KM ++ P + + +V G GK N +V
Sbjct: 236 VFTYNALISGFSAVSKLNYAID-LFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKV 292
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GRI+ A++ L + P+ +N++++ + AKL + +Y+ + D
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G L A + ++ K+N PNV T++ L+ G C++G V +A +L M
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMM 298
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ I D VT+N L+ G KV + + + M G N Y ++ G K
Sbjct: 299 KDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVD 358
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA L M C ++ P+ V+Y LI GLC + ++ +M +G P + + I+
Sbjct: 359 EAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSIL 418
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 114/241 (47%), Gaps = 5/241 (2%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
TFN+++N L I+ K G A N L+KGLC G++ A + D+
Sbjct: 98 TFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKV 157
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
Q + +Y TL++GLC+ G + A LL+R++ + + + V +N++I + K V
Sbjct: 158 VAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLV 217
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ L +M K P+ +Y ++ G + A +L +M E ++P+ ++ L
Sbjct: 218 NDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNIL 277
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETVDSLA 403
+ G C + V D VL M++ P + + ++ G + K N+ + + DS+A
Sbjct: 278 VDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAK----DIFDSMA 333
Query: 404 S 404
S
Sbjct: 334 S 334
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 147/330 (44%), Gaps = 9/330 (2%)
Query: 56 LSPTEVLKIFSNLR----DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIE 111
L P+ + ++FS L + ++IS N K+ P + I++ L +AK
Sbjct: 23 LFPSSI-RLFSQLHHKQDEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTAL 81
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN-LVL 170
+ Q++++ + SD F +N++ + G S + + P+ TFN L+
Sbjct: 82 SLHQQMELNGIE--SDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIK 139
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
L + ++ + + G +D L+ GLC+ G + AA +L + +
Sbjct: 140 GLCLKGHIHQALH-FHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQ 198
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PN Y+ ++ +C+ V +AF L +M ++ I D T+N LISG K+ + L
Sbjct: 199 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDL 258
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+MK + PN ++ ++ G + + +AK ++ M+ + + P V+Y L+ G C+
Sbjct: 259 FNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCS 318
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V + M G + + ++ +V
Sbjct: 319 INKVNKAKDIFDSMASGGVIANVQIYTTMV 348
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 140/291 (48%), Gaps = 8/291 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
K+++ NPN + ++++ + + + + IM + ++ D YN +
Sbjct: 263 KKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIK-----PDVVTYNSLMDGYC 317
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+++KA + M S +V+ + ++N K+ E ++ + +
Sbjct: 318 SINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVV 377
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+ L+ GLC+ G + A ++DE + PN+ TYS+++ LC+ +V++A LL +
Sbjct: 378 TYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNL 437
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ +GI D T+ ILI GL + G++E+ + E + KG + +Y ++ G DK F
Sbjct: 438 KDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFF 497
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+A L+ +M P+ +Y+ +I L + + + +L++M+ +G +
Sbjct: 498 DKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 121/257 (47%), Gaps = 17/257 (6%)
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C P + F +V+N L K E + A + G E D N+ + GLC+ ++ AF
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+L + ++ C P TY+ L+ GL + G ++EA +LE+M +G T+ ++I GL
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA----KELVGRMICERM 334
K G+VEE ++ M G GC P++ Y ++ GL + EA KE R
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVL-KKMVQQGFVPRMGMWREIV-----------GC 382
P V+Y LI GLC + + V + V++GF+P + I+ GC
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242
Query: 383 VTFGKDNRNRVYVTETV 399
F + RNR Y + V
Sbjct: 243 ERF-HEMRNRGYEPDAV 258
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 147/331 (44%), Gaps = 5/331 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYN---PNEALYTLIINKLAQAKRFDAI 110
D T ++K P ++ + + RK + P+ YT +I+ L +A R
Sbjct: 146 DAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEA 205
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
+ VE+ D Y I GR+ + E +M + P T+ ++
Sbjct: 206 RQVFDDEAVER-GFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALI 264
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
+ + AK+ + +Y + G + NI+L GLC+ G + A+ ++ C
Sbjct: 265 DGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCV 324
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
V TYS LM G C +GNV A L RM G + + V++NI+I GL + GK+ +
Sbjct: 325 ATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFY 384
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDK-KRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
E++ + P+ ++ L+GL + + EL M+ + SP+ SY L+ G+C
Sbjct: 385 FEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGIC 444
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+E + ++MV +G P + ++ ++
Sbjct: 445 RAGGLEVALEIFREMVSRGVAPDVVVFNTLI 475
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ +T++IN L + KR D +++R V C D YNV A R+ A
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLER-AVRAGCE-PDYVTYNVFIDGLCKAERVDDA 61
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M C P+ T+ +++ L+ A E + + G +++ G
Sbjct: 62 FQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDG 121
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA- 266
L + G +E A + + C P+ Y+ L+ GLC+ G EEA+ L + + A
Sbjct: 122 LSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHAT 181
Query: 267 ---DTVTFNILISGLRKQGKVEEGMKLL-ERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
D VT+ LI GL K G++ E ++ + +G P++ +Y ++ GL R E
Sbjct: 182 AVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEG 241
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
E M P V+Y LI G K++ V ++M+Q G V
Sbjct: 242 CERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTV 289
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 118/290 (40%), Gaps = 39/290 (13%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ + Y P+ Y +I+ +AK + +++ YN+I AG
Sbjct: 249 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGT--VVSTVTYNIILDGLCKAG 306
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+++A T M C +V T++ +++ S ++ G E + N
Sbjct: 307 RVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYN 366
Query: 203 ILLKGLCENGNLEAAFYVLDEFPK------------------------------------ 226
I+++GLC G L A++ ++ +
Sbjct: 367 IIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVS 426
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
Q PN+ +YS LM G+C G +E A + M S G+ D V FN LI L G+V+E
Sbjct: 427 QGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDE 486
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
+++ ++ + P++ SY +L GL +R EA+ L M + +P
Sbjct: 487 ALEVFRELERRSA-PDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 117/230 (50%), Gaps = 7/230 (3%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE----IQGIYTSAAKLGVEIDAC 199
I +A++ M S PSVK F L+L ++V K Y ++ I++S LG+E D
Sbjct: 57 IDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSS---LGIEADTI 113
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
LNI++ LC + F VL K EP V T + L++GLC +GNV +A GL++ M
Sbjct: 114 TLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHM 173
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E D T+ +LI+GL K G ++ L +M+ + PN Y ++ GL
Sbjct: 174 EKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLV 233
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
EA L M + + P+ V+Y LI GLCN ++ +L +M++ G
Sbjct: 234 SEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGM 283
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 107/251 (42%), Gaps = 35/251 (13%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T N+V+N L KL + + KLG+E L L+ GLC GN+ A ++D
Sbjct: 114 TLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHM 173
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
K +V TY L++GLC+ G+ A L +ME + V ++ ++ GL K G V
Sbjct: 174 EKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLV 233
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE----------------------- 321
E + L M GKG PN +Y ++ GL + R+ E
Sbjct: 234 SEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNIL 293
Query: 322 ------------AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
AK ++G MI P +Y LIH C Q + + V MV +G
Sbjct: 294 VDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGC 353
Query: 370 VPRMGMWREIV 380
+P + ++ ++
Sbjct: 354 LPDIVVFTSLI 364
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ GLC++G + A + E + PN+ TY+ L+ GLC G +E LL+ M G
Sbjct: 223 IMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMG 282
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D T NIL+ K+GKV + ++ M G P+ +Y +++ + + EA
Sbjct: 283 MRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAM 342
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ M+ P V + LIHG C K + V +L++M + GFVP + W ++G
Sbjct: 343 RVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIG 400
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 111/219 (50%), Gaps = 2/219 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ ++T +I+ + K + + +++ ++ K+ D + + AGR A
Sbjct: 355 PDIVVFTSLIHGWCKDKNINKVMHLLE--EMAKMGFVPDVVTWTTLIGGFCQAGRPLAAK 412
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E +M Y P+++T ++L+ L L E + + K ++++ +ILL G+
Sbjct: 413 ELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGM 472
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G L AA+ + P + + NV TY+ ++ GLC++G++++A LL ME G D
Sbjct: 473 CSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDN 532
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
T+N+ + GL + ++ +K L M+ KG ++A+ +
Sbjct: 533 CTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTE 571
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 2/244 (0%)
Query: 127 DGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D F YN +I IY + ++++A+ M S C P + F +++ K ++ +
Sbjct: 321 DVFTYNSLIHIYC-LQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHL 379
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
AK+G D L+ G C+ G AA + K PN++T + ++ GLC+
Sbjct: 380 LEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCK 439
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+ EA L E ME +D + V ++IL+ G+ GK+ +L + GKG N +
Sbjct: 440 GNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYT 499
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ GL + +A++L+ M P +Y + GL +K + L M
Sbjct: 500 YTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMR 559
Query: 366 QQGF 369
+GF
Sbjct: 560 DKGF 563
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 111/272 (40%), Gaps = 41/272 (15%)
Query: 35 SPSASHQDSDHHAYKLNHKDWLSPTEVLKIF------SNLRDPISVISVLNQYSKRKDYN 88
P +S H Y L +K E +++F L D + S+++ + K K+ N
Sbjct: 319 GPDVFTYNSLIHIYCLQNK----MNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNIN 374
Query: 89 ---------------PNEALYTLIINKLAQAKRFDAIEDIM-------QRIKVEKLCRFS 126
P+ +T +I QA R A +++ Q ++
Sbjct: 375 KVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVIL 434
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
DG GN+ +S+A+ M N ++ ++++L+ + SA ++
Sbjct: 435 DGL------CKGNL---LSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELF 485
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+S G++I+ I++KGLC+ G+L+ A +L + C P+ TY+ + GL K
Sbjct: 486 SSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTK 545
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + L M +G D T I I+ L
Sbjct: 546 KEIARSIKYLTIMRDKGFSVDAATTEITINYL 577
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 130/260 (50%), Gaps = 2/260 (0%)
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL-YG 180
LC + F V+K Y + I KA+ + ++ P V ++N VL+ + +K
Sbjct: 129 LCNSTSSVFDLVVKSYSRLC-LIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNIS 187
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ ++ + V + NIL++G C GNL+ A D K+ C PNV TY+TL+
Sbjct: 188 FAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLI 247
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
G C+ +++ F LL M +G++ + +++N++I+GL ++G+++E +L M +G
Sbjct: 248 DGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYS 307
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
+ +Y ++ G + F +A + M+ +SPS ++Y LIH +C +
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEF 367
Query: 361 LKKMVQQGFVPRMGMWREIV 380
L +M +G P + +V
Sbjct: 368 LDQMRVRGLCPNERTYTTLV 387
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 136/293 (46%), Gaps = 2/293 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y ++I A D R++ +K C + + +I Y + +I
Sbjct: 202 SPNVFTYNILIRGFCLAGNLDVALRFFDRME-KKGCLPNVVTYNTLIDGYCKLR-KIDDG 259
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L M P++ ++N+V+N L EI + T K G +D N L+KG
Sbjct: 260 FELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKG 319
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ GN A + E + P+V TY++L+H +C+ GN+ A L++M G+ +
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPN 379
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+ L+ G ++G + E ++L+ M G P+ +Y ++ G + +A ++
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLE 439
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + ++P VSY ++ G C V++ V +KMV +G P + ++
Sbjct: 440 DMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 33/311 (10%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC-------RFSDGFFYNVIKI 136
R +P+ YT +I+ + +A + + + +++V LC DGF
Sbjct: 338 RHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGF------- 390
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVE 195
+ G +++A L +M PSV T+N ++N ++ K+ I + + G+
Sbjct: 391 --SQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAI-AVLEDMKEKGLT 447
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D + +L G C + +++ A V + + +P+ TYS+L+ G CE+ +EA L
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+ M G+ D T+ LI+ +G +++ ++L M KG P+ +Y ++ GL
Sbjct: 508 FDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIH---------------GLCNQKLVEDVDWV 360
+ R EAK L+ ++ E PS V+Y LI G C + ++ + D V
Sbjct: 568 QARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 361 LKKMVQQGFVP 371
+ M+++ P
Sbjct: 628 FESMLEKNHKP 638
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 140/297 (47%), Gaps = 4/297 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGR 143
K PN Y ++IN L + R I ++ ++ K D YN +IK Y G
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEISFVLT--EMNKRGYSLDEVTYNTLIKGYCK-EGN 325
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A+ +M + PSV T+ +++ + A G+ +
Sbjct: 326 FHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTT 385
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G + G + A+ VL E P+V TY+ L++G C G + +A +LE M+ +G
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG 445
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D V+++ ++SG + V+E +++ +M KG P++ +Y ++ G +++R EA
Sbjct: 446 LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+L M+ + P +Y LI+ C + ++ + +MV++G +P + + ++
Sbjct: 506 DLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLI 562
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 23/220 (10%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDI---MQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K P+ Y+ +I + +R D+ M R+ + D F Y + M
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLP-----PDEFTYTALINAYCME 533
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE-----IQGIYTSAAKLGVEI 196
G + KAI+ +M P V T+++++N L E ++ Y + V
Sbjct: 534 GDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTY 593
Query: 197 DAC---CLNI-------LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
C NI L+KG C G + A V + ++N +P+ Y+ ++HG C
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRG 653
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
G++ +A+ L + M G TVT L+ L K+GKV E
Sbjct: 654 GDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNE 693
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 144/292 (49%), Gaps = 8/292 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L AK+++ E++M+ + + C ++ F I+ + G + +A+
Sbjct: 217 PDTYTYNTVLKGLCFAKQWEEAEELMREM-IRNNCHPNEVTFATQIRAFCQ-NGLLDRAV 274
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L MP Y C P V ++ ++N +G + + + + C N LKGL
Sbjct: 275 ELLEQMPKYGCMPDVVIYSTLVNGFSE---HGRVDDALKLLSTMLCRPNTVCYNAALKGL 331
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G + ++ E +++C PN T+STL++ LC+ E A +LE+M+ G D
Sbjct: 332 CIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDV 391
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V++N +IS +Q ++ +KLL M C P++ S+ VL L +R+ +A EL+ +
Sbjct: 392 VSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAK 448
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ E + +++ LI LC V+D + + M + P + + ++
Sbjct: 449 MLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLI 500
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 3/195 (1%)
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
A + V D N +LKGLC E A ++ E + NC PN T++T + C+ G +
Sbjct: 211 ASMPVAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLL 270
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+ A LLE+M G D V ++ L++G + G+V++ +KLL M C PN+ Y
Sbjct: 271 DRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAA 327
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L GL R+ E EL+ M+ + P+ ++ LI+ LC +L E VL++M + G+
Sbjct: 328 LKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGY 387
Query: 370 VPRMGMWREIVGCVT 384
+P + + I+ C +
Sbjct: 388 MPDVVSYNTIISCFS 402
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 147/321 (45%), Gaps = 42/321 (13%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAG 142
RKD PN+A ++ +IN L Q + + ++++ +++K D YN +I + A
Sbjct: 349 RKDCPPNDATFSTLINSLCQNRLAEYAIEVLE--QMQKYGYMPDVVSYNTIISCFSEQAC 406
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
A + L + S C P +FN VL L A+ + + + K + N
Sbjct: 407 ----ADDALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFN 462
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ LC+NG ++ A + + PK C P++ TYS+L++G E+G + AF L M
Sbjct: 463 ILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCR 522
Query: 263 G-----------------------IDADT---------VTFNILISGLRKQGKVEEGMKL 290
+ AD VTFNILI+ L ++G V +++
Sbjct: 523 ADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEV 582
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
E+M G P+ +Y ++ G ++ +A + + M CE P +SY ++ GLC
Sbjct: 583 YEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPCE---PDTISYNSILKGLCR 639
Query: 351 QKLVEDVDWVLKKMVQQGFVP 371
+ +D + ++ +M+++ P
Sbjct: 640 AERWKDAEKLVTEMLRKNCTP 660
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 129/254 (50%), Gaps = 8/254 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + ++ L +A+R+ ++M ++ E ++ +N++ G++ AI
Sbjct: 421 PDTISFNAVLKCLCRAERWYDAAELMAKMLKEDC--HTNEMTFNILIDSLCQNGQVKDAI 478
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E MP Y C P + T++ ++N L ++ S + D N LKGL
Sbjct: 479 EMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRS---MPCRADIFSYNATLKGL 535
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C + A ++ + ++C PN T++ L++ LC+KG V A + E+M GI D
Sbjct: 536 CMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDI 595
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N LI+G +QG +++ +K L M C P++ SY +L GL +R+ +A++LV
Sbjct: 596 FTYNALINGYSEQGCLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTE 652
Query: 329 MICERMSPSFVSYK 342
M+ + +P+ V++K
Sbjct: 653 MLRKNCTPNEVTFK 666
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 133/293 (45%), Gaps = 10/293 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK-A 147
PN Y + L A R+D + +++ + V K C +D F +I R+++ A
Sbjct: 319 PNTVCYNAALKGLCIAGRWDEVGELIAEM-VRKDCPPNDATFSTLINSLCQ--NRLAEYA 375
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
IE L M Y P V ++N +++ + + S + + D N +LK
Sbjct: 376 IEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNS---MLCKPDTISFNAVLKC 432
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC A ++ + K++C N T++ L+ LC+ G V++A + E M D
Sbjct: 433 LCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPD 492
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT++ LI+G +QG + L M C + SY L GL R+ +A EL+
Sbjct: 493 IVTYSSLINGFSEQGLDKVAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIA 549
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + P+ V++ LI+ LC + LV V ++M + G P + + ++
Sbjct: 550 DMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALI 602
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 118/277 (42%), Gaps = 46/277 (16%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V T N+++ L + + + + + A K DA N L+ G C +G+L A V
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVL-EALKTSGAADAVSHNTLVAGYCRDGSLWDAERV 175
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL-- 278
L E + + NV TY+ L+ G C G + +A L+ M + DT T+N ++ GL
Sbjct: 176 L-EAARASGAANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCF 231
Query: 279 ---------------------------------RKQGKVEEGMKLLERMKGKGCYPNSAS 305
+ G ++ ++LLE+M GC P+
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVI 291
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + R +A +L+ M+C P+ V Y + GLC ++V ++ +MV
Sbjct: 292 YSTLVNGFSEHGRVDDALKLLSTMLCR---PNTVCYNAALKGLCIAGRWDEVGELIAEMV 348
Query: 366 QQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVDSL 402
++ P + ++ + NR Y E ++ +
Sbjct: 349 RKDCPPNDATFSTLINSLC---QNRLAEYAIEVLEQM 382
>gi|359482337|ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Vitis vinifera]
Length = 405
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 133/282 (47%), Gaps = 3/282 (1%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
RDP + + + + N + +++LA A RFD IE +++ K R +G
Sbjct: 53 RDPERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEHQKTLPQGR-REG 111
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F +I +YG AG I +A++T +DM + C +VK+FN L +L + I
Sbjct: 112 FIVRIIMLYGK-AGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAIDLFLRD 170
Query: 189 AA-KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
K G+E+D +NI++K LC+ LE A+ V+ E K P+V TY+TL+ +
Sbjct: 171 VPFKFGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSN 230
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
E GL M +G + TFN+ I L + + + L+ M+ G P+ +Y
Sbjct: 231 RWEVGNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITPDEVTYN 290
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
V+ G AK++ + + P+ Y+ +IH LC
Sbjct: 291 LVIKGFCQAGYLEMAKKVYSALHGKGYKPNVKIYQTMIHYLC 332
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C P++ TFN+ + LV+ + + + LG+ D N+++KG C+ G LE A
Sbjct: 247 CLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITPDEVTYNLVIKGFCQAGYLEMAK 306
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
V + +PNV+ Y T++H LC+ G + A+ + + + + T L+ GL
Sbjct: 307 KVYSALHGKGYKPNVKIYQTMIHYLCKGGEFDMAYTMCKDCMNRNWSLNVDTIYKLLEGL 366
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
+ G++++ K++ R+ K S + V +L KK+
Sbjct: 367 KGNGEIDKA-KVILRLARKRVPSFSKNQLGVFESVLSKKQ 405
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 147/351 (41%), Gaps = 63/351 (17%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK---------VEKLC-RFSDGFFYNV 133
RK P+E +T II+ L + R D I+ + V LC +F + V
Sbjct: 190 RKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLV 249
Query: 134 IK------------IYGNMAGRISKAIE------TLFDMPSYNCWPSVKTFNLVLNLLVS 175
+ Y ++ G KA E L M + C P+V+TF +++
Sbjct: 250 VDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFD 309
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ G++ G N+L++GLC G+L+ A +V K +C P+VRT
Sbjct: 310 DGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRT 369
Query: 236 YSTLMHG-----------------------------------LCEKGNVEEAFGLLERME 260
YSTL+ G LC+K ++A L+++M
Sbjct: 370 YSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMS 429
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
E +T+TFN LI L G+ + + M+ GC PN +Y E+L+GL +
Sbjct: 430 LENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCE 489
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A ++ M+ S VSY I GLC +++++ +L +M+ QG P
Sbjct: 490 DALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQP 540
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 118/240 (49%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + A+ DM + C P+V + ++++L ++ + + + + +
Sbjct: 380 AGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLT 439
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L++ LC+ G A V + C PN RTY+ L+HGL +GN E+A +L M
Sbjct: 440 FNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEML 499
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G + V++N ISGL + ++E M LL RM +G P++ ++ +++ +
Sbjct: 500 NHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVR 559
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ++GRM + V+Y L+ GLC+Q ++D L KM+ +G P W +V
Sbjct: 560 AAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLV 619
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 126/309 (40%), Gaps = 33/309 (10%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR------------FSDGFFYNVIKI 136
P+ YT I+ +A+ I+ R+ E F DG ++ + +
Sbjct: 260 PDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGM 319
Query: 137 YGNMA---------------------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
+ M G + +A+ M +C P V+T++ +++
Sbjct: 320 WNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSK 379
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
A I+ G + + ++ LC+ + A ++D+ +NC PN T
Sbjct: 380 AGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLT 439
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
++TL+ LC+ G A + M G + T+N L+ GL ++G E+ +++L M
Sbjct: 440 FNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEML 499
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
G + SY + GL + EA L+GRMI + + P ++ +IH C + V
Sbjct: 500 NHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVR 559
Query: 356 DVDWVLKKM 364
W+L +M
Sbjct: 560 AAAWMLGRM 568
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 122/271 (45%), Gaps = 14/271 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+ D P+ Y+ +I+ ++A D I + + G NV+ +Y NM
Sbjct: 360 KSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMT-------NAGCKPNVV-VYTNMVDV 411
Query: 144 ISKAI-----ETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+ K + E L D M NC P+ TFN ++ L G ++ + G +
Sbjct: 412 LCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPN 471
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N LL GL GN E A +L E E ++ +Y+T + GLC+ ++EA LL
Sbjct: 472 DRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLG 531
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
RM +GI D TFN +I K+G V +L RM C N +Y ++ GL +
Sbjct: 532 RMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQH 591
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ +A + +M+ E + P+ ++ L+ G+
Sbjct: 592 KLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 146/374 (39%), Gaps = 49/374 (13%)
Query: 48 YKLNHKDWLSPTEVLKIFSNLRDPIS----VISVLNQYS--KRKDYNPNEALYTLIINKL 101
Y+ H D ++++++L D + V +V+ Y ++ PN Y L+I L
Sbjct: 114 YRARH-DLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKAL 172
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWP 161
Q R A ++ + K CR + +I + R+ +A L +M P
Sbjct: 173 CQNDRVGAARRMLDEM-ARKGCRPDEVSHTTIISALCKL-DRLDEARGILAEMT-----P 225
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
++N V++ L E+ + G+ D ++ C+ L A +L
Sbjct: 226 VGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAIL 285
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL--- 278
+ C PNV+T++ L+ G + G V +A G+ M +EG T+++N+LI GL
Sbjct: 286 ARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHI 345
Query: 279 --------------------------------RKQGKVEEGMKLLERMKGKGCYPNSASY 306
K G ++ M + M GC PN Y
Sbjct: 346 GDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVY 405
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ L K F +A+ L+ +M E P+ +++ LI LC+ V M +
Sbjct: 406 TNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRR 465
Query: 367 QGFVPRMGMWREIV 380
G P + E++
Sbjct: 466 YGCPPNDRTYNELL 479
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN-----CEPNVR 234
G++ G+ + ++ + AC L+ +C AA L F + P VR
Sbjct: 69 GDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRARHDLGCAAPTVR 128
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y+ L+ L + V + + M G++ + T+N+LI L + +V ++L+ M
Sbjct: 129 VYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEM 188
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
KGC P+ S+ ++ L R EA R I M+P SY ++H LC Q +
Sbjct: 189 ARKGCRPDEVSHTTIISALCKLDRLDEA-----RGILAEMTPVGASYNAVVHALCGQFRM 243
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIVG 381
+V V+ +MV +G P + IVG
Sbjct: 244 REVFLVVDEMVHRGLRPDTVAYTSIVG 270
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 120/247 (48%)
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
D F YN I + +A E L D P T+ ++N L +
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 349
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
++ A G++ D N L+KGLC G + A V++E ++ C P+++TY+ +++GLC
Sbjct: 350 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 409
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ GN+ +A ++ +G D TFN LI G K+ K++ ++L+ERM G P++
Sbjct: 410 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI 469
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y VL GL + E E MI + P+ ++Y LI C +E+ V+ KM
Sbjct: 470 TYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 529
Query: 365 VQQGFVP 371
Q+G P
Sbjct: 530 SQEGLHP 536
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 130/249 (52%), Gaps = 3/249 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + +A+E + + P + +N LV L + + +Q + A+ G D
Sbjct: 342 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ-VMNEMAEEGCHPDIQT 400
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI++ GLC+ GN+ A V+++ + P+V T++TL+ G C++ ++ A L+ERM
Sbjct: 401 YNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMW 460
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI DT+T+N +++GL K GKV E + + M KGC+PN +Y ++ +
Sbjct: 461 EYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKME 520
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA +++ +M E + P VS+ LI+G C +E + +K+ ++G+ + ++
Sbjct: 521 EASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 580
Query: 381 GCVTFGKDN 389
G + GK N
Sbjct: 581 GAFS-GKLN 588
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 32/262 (12%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGR+ A++ M + C P+ +N +++ LV A + + +Y GV D
Sbjct: 66 AGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHT 125
Query: 201 LNILLKGLC-------------------------------ENGNLEAAFYVLDEFPKQNC 229
I L+ C +G+ A + D+ +
Sbjct: 126 HTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHV 185
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
PN+ ++ ++H LC++G+V EA LL ++ G+ + T+NI I GL + G++ E ++
Sbjct: 186 FPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVR 245
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
L++ M+ P+ +Y ++ GL K EA + RM+ + P +Y +I G C
Sbjct: 246 LVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYC 304
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
+V++ +LK V +GFVP
Sbjct: 305 KISMVQEATELLKDAVFKGFVP 326
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 143/335 (42%), Gaps = 37/335 (11%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P++ Y +IN L + ++ + + + D YN + + G I
Sbjct: 322 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI--KPDIVVYNSLVKGLCLQGLI 379
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLV-------------SAKLYGEIQGIYT---- 187
A++ + +M C P ++T+N+V+N L A + G + ++T
Sbjct: 380 LHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL 439
Query: 188 -----------SAAKL-------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
SA +L G+ D N +L GLC+ G + E + C
Sbjct: 440 IDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGC 499
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
PN TY+ L+ C +EEA ++ +M EG+ D V+FN LI G + G +E
Sbjct: 500 HPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 559
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
L ++++ KG + ++ ++ K A+++ M+ + +Y+ LI G C
Sbjct: 560 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 619
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
V+ L +M+++GF+P M + ++ +T
Sbjct: 620 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 654
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%)
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A+ L M + C P T+N +++ + E + A G D L+
Sbjct: 276 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 335
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC G++E A + +E + +P++ Y++L+ GLC +G + A ++ M EG
Sbjct: 336 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 395
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D T+NI+I+GL K G + + ++ KG P+ ++ ++ G + + A +L
Sbjct: 396 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 455
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
V RM ++P ++Y +++GLC V +V+ ++M+ +G P
Sbjct: 456 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP 501
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 140/302 (46%), Gaps = 4/302 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN A + +++ L KR D +E + KV + + F YN+ AGR+ +A+
Sbjct: 187 PNLAAFNKVLHALC--KRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV 244
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M +Y P V T+N ++ L + E G D N ++ G
Sbjct: 245 RLVDGMRAY-AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGY 303
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ ++ A +L + + P+ TY +L++GLC +G+VE A L +++GI D
Sbjct: 304 CKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI 363
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +N L+ GL QG + ++++ M +GC+P+ +Y V+ GL +A ++
Sbjct: 364 VVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMND 423
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
I + P ++ LI G C + ++ ++++M + G P + ++ G GK
Sbjct: 424 AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK 483
Query: 388 DN 389
N
Sbjct: 484 VN 485
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 135/302 (44%), Gaps = 3/302 (0%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+ + V+N+ ++ + +P+ Y ++IN L + +M ++ D F +
Sbjct: 380 LHALQVMNEMAE-EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY--LPDVFTF 436
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + ++ A++ + M Y P T+N VLN L A E+ +
Sbjct: 437 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 496
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G + NIL++ C + +E A V+ + ++ P+ +++TL++G C G++E
Sbjct: 497 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 556
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A+ L +++E +G A TFN LI + + K+ + M KG +S +Y+ ++
Sbjct: 557 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 616
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G A + MI + PS ++ ++I+ L V ++ MV+ G VP
Sbjct: 617 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676
Query: 372 RM 373
+
Sbjct: 677 EV 678
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 122/268 (45%), Gaps = 2/268 (0%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
IS +V+ + K Y P+ + +I+ + + D+ +++R+ + D Y
Sbjct: 414 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA--PDTITY 471
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + AG++++ ET +M C P+ T+N+++ + E + ++
Sbjct: 472 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ 531
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ DA N L+ G C NG+LE A+ + + ++ T++TL+ K N+
Sbjct: 532 EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 591
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A + + M S+G AD+ T+ +LI G K V+ L M KG P+ +++ V+
Sbjct: 592 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 651
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFV 339
L R +A ++ M+ + P V
Sbjct: 652 SLTVNHRVFQAVGIIHIMVKIGVVPEVV 679
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 138/290 (47%), Gaps = 12/290 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PNE +YT +IN +A + D +++ +K E+ + D ++ + GRI +A+
Sbjct: 109 PNEIMYTTVINGFCKAGQVDQAFELLDEMK-ERGVKM-DVLLHSTLIQGLCRKGRIDEAL 166
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSA-------KLYGEIQGIYTSAAKLGVEIDACCL 201
E M C P+V T+N V+N L A +L+ +++ Y A G E D
Sbjct: 167 EQFKSM-GEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYE--ASHGCEPDVISY 223
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ LC+ ++ A+ C PNV TYS+L+ GLC+ E LL M+
Sbjct: 224 STVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKE 283
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G + + FN ++ L K + E+ + ER+ G PN +Y ++GL R E
Sbjct: 284 KGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDE 343
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A ++ M+ +++P ++Y +I G C ++ D V +M+ +P
Sbjct: 344 AYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIP 393
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 141/311 (45%), Gaps = 6/311 (1%)
Query: 78 LNQY-SKRKDYNPNEALYTLIINKLAQAKRFDA----IEDIMQRIKVEKLCRFSDGFFYN 132
L Q+ S ++ +PN Y ++N L +A R D +D+ +R + C D Y+
Sbjct: 166 LEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCE-PDVISYS 224
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ A R+ KA E M + C P+V T++ +++ L E + +
Sbjct: 225 TVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEK 284
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G I+ N +L L +N E A + K +PNV TY+ +HGLC+ G V+EA
Sbjct: 285 GFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEA 344
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ +L M + D +T++ +I G K G++++ + RM C P+ ++ +L+G
Sbjct: 345 YRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHG 404
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+ K+ EA + M+ P +Y L+ +C VE + KM ++ P
Sbjct: 405 FSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPD 464
Query: 373 MGMWREIVGCV 383
+ ++ C+
Sbjct: 465 CNTYAPLIQCL 475
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 155/367 (42%), Gaps = 82/367 (22%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
++P ++ + DP + + + N +++N +AKR + +++
Sbjct: 41 VTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLK 100
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
++E LC ++ + VI + AG++ +A E L +M
Sbjct: 101 E-ELEPLCFPNEIMYTTVINGFCK-AGQVDQAFELLDEM--------------------- 137
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK--QNCEPNV 233
+ GV++D + L++GLC G ++ A L++F + C PNV
Sbjct: 138 --------------KERGVKMDVLLHSTLIQGLCRKGRIDEA---LEQFKSMGEECSPNV 180
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERME-----SEGIDADTVTFNILISGLRKQGKVEEGM 288
TY+T+++GLC+ ++EA L + ME S G + D ++++ +I L K +V++
Sbjct: 181 ITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAY 240
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM------------------- 329
+ +RM+ GC PN +Y ++ GL R E EL+ M
Sbjct: 241 EYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHAL 300
Query: 330 --------IC---ERM-----SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
C ER+ P+ V+Y +HGLC V++ +L +MV+ P +
Sbjct: 301 WKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDV 360
Query: 374 GMWREIV 380
+ I+
Sbjct: 361 ITYSSII 367
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 134/329 (40%), Gaps = 36/329 (10%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK-----------LCRFSD--------- 127
P+ Y+ II+ +A R D +D+ R+ V + L FS+
Sbjct: 357 TPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFR 416
Query: 128 --------GFF-----YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
GF YNV+ A + A+E M P T+ ++ L
Sbjct: 417 VHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLC 476
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
A+ E + V + + L++ LC+ G ++ A VLD + C+P
Sbjct: 477 RARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGE 536
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T+ L+ L + E A LL S G AD T+++ ++ + K GK +E ++++E+M
Sbjct: 537 TFKILVEELYLRKKWEAASKLLR---SPGFVADAATYSLCVAEICKAGKPDEAVEVIEQM 593
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
KG P+ +Y VL L R A +M +P V+Y LI C+ +
Sbjct: 594 VLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMA 653
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
++ + + MV GF P+ R + C+
Sbjct: 654 DEAFRIFEAMVAAGFTPQAQTMRTLSSCL 682
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 136/326 (41%), Gaps = 21/326 (6%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E L++F ++ +Y P+ Y+ +I+ L +A+R D + +R++
Sbjct: 198 EALELFDDME---------KRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR- 247
Query: 120 EKLCRFSDGFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ G NV+ + G R S+ +E L M ++ FN +L+ L
Sbjct: 248 ------AVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALW 301
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
+ + K G + + N+ + GLC+ G ++ A+ +L E + P+V
Sbjct: 302 KNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVI 361
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TYS+++ G C+ G +++A + RM VTF L+ G + K E ++ E M
Sbjct: 362 TYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDM 421
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
G P +Y ++ + A E+ +M ++ P +Y LI LC + V
Sbjct: 422 VNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRV 481
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
++ L M VP + +V
Sbjct: 482 DEAKEFLDVMEADNVVPNGAICHALV 507
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 130/303 (42%), Gaps = 22/303 (7%)
Query: 25 ITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEV--LKIFSNLRDPI----SVISVL 78
I TF S A+++ H+D ++ + L+ ++ L D + SV S L
Sbjct: 392 IPHPVTFMTLLHGFSEHKKSREAFRV-HEDMVNAGFIPGLQTYNVLMDCVCGADSVESAL 450
Query: 79 NQYSK--RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
Y K RK P+ Y +I L +A+R D ++ + ++ + + +G + +
Sbjct: 451 EIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNV--VPNGAICHALVE 508
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---- 192
G + +A L ++ C P +TF +++ +LY ++ + +A+KL
Sbjct: 509 VLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVE-----ELY--LRKKWEAASKLLRSP 561
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G DA ++ + +C+ G + A V+++ + P+ TY ++ LC VE A
Sbjct: 562 GFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESA 621
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
E+M S G VT+ +LI +E ++ E M G P + + + +
Sbjct: 622 IAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSC 681
Query: 313 LLD 315
L D
Sbjct: 682 LRD 684
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 108/262 (41%), Gaps = 15/262 (5%)
Query: 120 EKLCRFSDGFF----------YNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNL 168
EK C+F + YNV ++G AGR+ +A L +M P V T++
Sbjct: 307 EKACQFFERLLKSGKKPNVVTYNV-AVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSS 365
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
+++ A + ++T LL G E+ AF V ++
Sbjct: 366 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 425
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
P ++TY+ LM +C +VE A + +M+ + D T+ LI L + +V+E
Sbjct: 426 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAK 485
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ L+ M+ PN A ++ L + EA ++ ++ P ++K L+ L
Sbjct: 486 EFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL 545
Query: 349 CNQKLVEDVDWVLKKMVQQGFV 370
+K E +L+ GFV
Sbjct: 546 YLRKKWEAASKLLR---SPGFV 564
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 131/264 (49%), Gaps = 1/264 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+ YN++ G++ +A L M P V T++ +++ + Q ++ +
Sbjct: 270 YTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNA 329
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ +GV D IL+ G C+N ++ A + E ++N P + TYS+L+ GLC+ G
Sbjct: 330 MSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ + L++ M GI A+ +T+N LI GL K G ++ + L +MK +G P S ++
Sbjct: 390 ISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTI 449
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+L GL R +A+E ++ + Y +I+G C Q L+E+ +L KM + G
Sbjct: 450 LLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENG 509
Query: 369 FVPRMGMWREIVGCVTFGKDNRNR 392
VP + I+ + F KD ++
Sbjct: 510 CVPNAVTFDIIINAL-FKKDENDK 532
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + FN +L+ K Y + G++ D LNIL+ C G + F V
Sbjct: 57 PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K+ +P+ T++TL+ GLC KG V +A +++ ++GI D V++ LI+G+ K
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G +KL+ ++ G+ PN Y ++ L + EA L M + +S V+
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI+G C +++ +L +MV + P + + +V
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 147/344 (42%), Gaps = 37/344 (10%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLII---------NK---- 100
D ++ ++ F ++ SVL + KR Y P+ +T +I NK
Sbjct: 93 DLITLNILINCFCHMGQITFGFSVLAKILKR-GYQPHTITFTTLIKGLCLKGQVNKALHF 151
Query: 101 ----LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS 156
LAQ +FD + + +C+ D IK+ + GR++K
Sbjct: 152 HDKLLAQGIKFDQVS---YGTLINGVCKIGDT--RGAIKLVRKIDGRLTK---------- 196
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
P+V+ +N +++ L +L E G+++ G+ D L+ G C L+
Sbjct: 197 ----PNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKE 252
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A +L+E + PNV TY+ L+ LC++G V+EA +L M + D +T++ L+
Sbjct: 253 AIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMD 312
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G ++++ + M G P+ SY ++ G K EA L M + M P
Sbjct: 313 GYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVP 372
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+Y LI GLC + V ++ +M +G + + ++
Sbjct: 373 GIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLI 416
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 101/191 (52%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+ +M N P + T++ +++ L + + + G+ + N
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNS 414
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+NG+L+ A + ++ Q P T++ L+ GLC+ G +++A + + ++G
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKG 474
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D +N++I+G KQG +EE + +L +M+ GC PN+ ++ ++ L K +A+
Sbjct: 475 YHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAE 534
Query: 324 ELVGRMICERM 334
+L+ +MIC +
Sbjct: 535 KLLRQMICRGL 545
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 144/333 (43%), Gaps = 45/333 (13%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRIS 145
+ P + I++ A+ K + + R++++ + D N+ I + +M G+I+
Sbjct: 55 HTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQ--PDLITLNILINCFCHM-GQIT 111
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLN 202
L + P TF ++ L L G++ KL G++ D
Sbjct: 112 FGFSVLAKILKRGYQPHTITFTTLIKGLC---LKGQVNKALHFHDKLLAQGIKFDQVSYG 168
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G+C+ G+ A ++ + + +PNV Y+T++ LC+ V EA+GL M ++
Sbjct: 169 TLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAK 228
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI AD VT+ LI G K++E + LL M K PN +Y ++ L + + EA
Sbjct: 229 GISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288
Query: 323 KELVGRMI--CER---------------------------------MSPSFVSYKKLIHG 347
K ++ M+ C + ++P SY LI+G
Sbjct: 289 KNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILING 348
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C K+V++ + K+M Q+ VP + + ++
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
>gi|449479641|ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 143/288 (49%), Gaps = 15/288 (5%)
Query: 101 LAQAKRFDAIEDIMQR------IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM 154
LA K+F IEDI++ IKVE GF +IK+YG AG S A + ++
Sbjct: 84 LAVRKKFSLIEDIIEAQKKYEDIKVE-------GFATRLIKLYGK-AGMFSHARKLFDEL 135
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACCLNILLKGLCENGN 213
P NC +VK+FN +L V +K + +++ I+ + + ++ D NI++ CE
Sbjct: 136 PELNCERTVKSFNSLLASCVKSKEFDQVEKIFREVPQEVSIKADVISYNIVINAFCEMDA 195
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A + K EPN+ T++TL+ L KG + + ME++ I D V++N
Sbjct: 196 LDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNIAPDLVSYNA 255
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+ G+ + ++++G++LL +M+ K P+ SY ++ G EAK+ ++
Sbjct: 256 RLRGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEEAKKWYYKLKESE 315
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ P +Y+ L+ LC Q + + K+ + +GFV + +V
Sbjct: 316 VDPIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFHTAEVQRVVN 363
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 10/264 (3%)
Query: 64 IFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC 123
+FS+ R + LN K +N ++ ++K FD +E I + + E
Sbjct: 124 MFSHARKLFDELPELNCERTVKSFNS-------LLASCVKSKEFDQVEKIFREVPQEVSI 176
Query: 124 RFSDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
+ +D YN VI + M + KAI DM P++ TFN +L L + +
Sbjct: 177 K-ADVISYNIVINAFCEMDA-LDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDG 234
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ ++ + + D N L+G+ ++ +L + ++ +P+V +Y+ L+ G
Sbjct: 235 ERVWATMENKNIAPDLVSYNARLRGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKG 294
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
C+ G++EEA +++ +D T+ IL+ L +QG + G++L + KG +
Sbjct: 295 FCQDGDLEEAKKWYYKLKESEVDPIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFH 354
Query: 303 SASYQEVLYGLLDKKRFPEAKELV 326
+A Q V+ GL + + EAK+LV
Sbjct: 355 TAEVQRVVNGLAEVSKIEEAKDLV 378
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 100/209 (47%), Gaps = 3/209 (1%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKL-GVEIDACCLNILLKGLCENGNLEAAFYVLDE 223
TF+ + LL K + I+ I + K ++++ L+K + G A + DE
Sbjct: 76 TFDSTVRLLAVRKKFSLIEDIIEAQKKYEDIKVEGFATR-LIKLYGKAGMFSHARKLFDE 134
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE-GIDADTVTFNILISGLRKQG 282
P+ NCE V+++++L+ + ++ + + E I AD +++NI+I+ +
Sbjct: 135 LPELNCERTVKSFNSLLASCVKSKEFDQVEKIFREVPQEVSIKADVISYNIVINAFCEMD 194
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+++ + M+ G PN ++ +L L K +F + + + M + ++P VSY
Sbjct: 195 ALDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNIAPDLVSYN 254
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ G+ +K ++D +L KM ++ P
Sbjct: 255 ARLRGMVLEKRIQDGIELLAKMEEKEIKP 283
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 145/292 (49%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +++ +A+ K+FD + + + K+++L + YN++ +IS A+
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGE--KMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M PS+ T + +LN K + + ++G D L+ GL
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ A ++D ++ C+PN+ TY +++GLC++G+ + A LL +ME+ I+AD
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V FN +I L K V++ + L + M+ KG PN +Y ++ L R+ +A +L+
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI ++++P+ V++ LI + + + + M+++ P + + +V
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 35/274 (12%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR S A + L DM P++ TFN +++ V + E + +Y K ++ D
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C + L+ A + + ++C P+V TY+TL+ G C+ VE+ L M
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ DTVT+ LI GL G + K+ ++M G P+ +Y +L GL + + +
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 488
Query: 322 AKELVGRM------------------ICER-----------------MSPSFVSYKKLIH 346
A E+ M +C+ + P+ V+Y +I
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
GLC+++L+++ +LKKM + G +P G + ++
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 136/308 (44%), Gaps = 14/308 (4%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSD 127
R IS+ L + Y P+ + ++N KR DA+ + Q +++
Sbjct: 133 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM-------- 184
Query: 128 GFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
G+ + I + G + S+A+ + M C P++ T+ +V+N L
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ +E D N ++ LC+ +++ A + E + PNV TYS+L+
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC G +A LL M + I+ + VTFN LI K+GK E KL + M + P+
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+Y ++ G R +AK++ M+ + P V+Y LI G C K VED + +
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 363 KMVQQGFV 370
+M +G V
Sbjct: 425 EMSHRGLV 432
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 1/246 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ AI M PS+ FN +L+ + K + + + +L + N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C + A +L + K EP++ T S+L++G C + +A L+++M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G DT+TF LI GL K E + L++RM +GC PN +Y V+ GL + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ V + +I LC + V+D + K+M +G P + + ++ C
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 383 V-TFGK 387
+ ++G+
Sbjct: 305 LCSYGR 310
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 8/266 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRF---DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K NPN + +I+ + +F + + D M + ++ D F YN + M
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID-----PDIFTYNSLVNGFCMH 378
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ KA + M S +C+P V T+N ++ +K + ++ + G+ D
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L++GL +G+ + A V + P++ TYS L+ GLC G +E+A + + M+
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
I D + +I G+ K GKV++G L + KG PN +Y ++ GL K+ E
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 322 AKELVGRMICERMSPSFVSYKKLIHG 347
A L+ +M + P+ +Y LI
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 137/282 (48%), Gaps = 6/282 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++N L + D +++ +++ K+ +D +N I + A+
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI--EADVVIFNTIIDSLCKYRHVDDAL 280
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M + P+V T++ +++ L S + + + + + + + N L+
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G A + D+ K++ +P++ TY++L++G C +++A + E M S+ D
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N LI G K +VE+G +L M +G ++ +Y ++ GL A+++ +
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 329 MICERMSPSFVSYKKLIHGLCN----QKLVEDVDWVLKKMVQ 366
M+ + + P ++Y L+ GLCN +K +E D++ K ++
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 123/285 (43%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ +T +I+ L + ++ R+ V++ C+ + Y V+ G
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQ-PNLVTYGVVVNGLCKRGDTDL 243
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ L M + V FN +++ L + + ++ G+ + + L+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC G A +L + ++ PN+ T++ L+ ++G EA L + M ID
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T+N L++G ++++ ++ E M K C+P+ +Y ++ G KR + EL
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + V+Y LI GL + ++ V K+MV G P
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 1/178 (0%)
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL GL + L+ A + K P++ ++ L+ + + + L E+M+
Sbjct: 56 ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
I T+NILI+ ++ ++ + LL +M G P+ + +L G KR +A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LV +M+ P +++ LIHGL + ++ +MVQ+G P + + +V
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 164/343 (47%), Gaps = 39/343 (11%)
Query: 64 IFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC 123
+F N R+ + + + N+ +R PN YT++++ + + ++ D I+ + +EK
Sbjct: 329 LFGNDRN-LEGMDLFNEMRERS-CEPNVHTYTVMVDAMCKERKLDESRRILNEM-MEKGL 385
Query: 124 RFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN---------------- 167
S + +I+ Y GRI A+E L M S NC P+ +T+N
Sbjct: 386 VPSVVTYNALIRGYCE-EGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAM 444
Query: 168 LVLNLLVSAKLYGEI------------QGIYTSAAKL-------GVEIDACCLNILLKGL 208
+L+ ++ +KL + G + SA KL G+ D ++ + L
Sbjct: 445 TLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTL 504
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++ +E A + + ++ + N Y+ L+ G C+ G ++EA LLERM SE ++
Sbjct: 505 CKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNS 564
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N LI G+ K+GKV+EG+ ++E M G P A+Y ++ +L + F A + +
Sbjct: 565 STYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQ 624
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ P +Y IH C V++ + ++ +M++ G +P
Sbjct: 625 MVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMP 667
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 137/291 (47%), Gaps = 2/291 (0%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
NE YT II+ L +A R D + ++++ + + + ++GN R + ++
Sbjct: 283 NEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGN--DRNLEGMD 340
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+M +C P+V T+ ++++ + + E + I + G+ N L++G C
Sbjct: 341 LFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYC 400
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
E G +EAA +L NC PN RTY+ L+ G ++ +V +A LL +M + V
Sbjct: 401 EEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLV 460
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+N LI K G + KLL+ +K G P+ +Y + L KR EA +L +
Sbjct: 461 TYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSL 520
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + V Y LI G C +++ +L++M + +P + ++
Sbjct: 521 KEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLI 571
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 165/399 (41%), Gaps = 70/399 (17%)
Query: 36 PSASHQDSDHHAYK-LNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEAL- 93
P S HH L+H W K+ NL P V S+ N + D NPN AL
Sbjct: 49 PDPPDDLSSHHFLSILSHPKWQRHPSFQKLIPNL-SPSHVSSLFNNHP---DLNPNIALQ 104
Query: 94 ------------------YTLIINKLAQAKRFDAIEDIMQRIKVEKLC------RF---- 125
++ ++ L F E I RI + K C RF
Sbjct: 105 FFNSLPLIKPGFKHTVKSHSFLLKILIPNNLFGVGEKI--RISMIKACVSVDDIRFLLDF 162
Query: 126 --------SDGFFYNVIKIYGNMAGRISKAI----------ETLFDMPSYNCWPSVKTFN 167
+D F ++ Y + +++ + E L DM P++ T N
Sbjct: 163 LRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDM----IVPNIYTLN 218
Query: 168 LVLNL------LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
++N +V A LY + I+ + G+ D+ L+ G C N ++ +A+ V
Sbjct: 219 TMVNAYSKMGNIVEANLY--VSKIFQA----GLSPDSFTYTSLILGYCRNNDVNSAYKVF 272
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
+ P + C N +Y+T++HGLCE G ++E L ++M + T+ ++I L
Sbjct: 273 NMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGN 332
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
+ EGM L M+ + C PN +Y ++ + +++ E++ ++ M+ + + PS V+Y
Sbjct: 333 DRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTY 392
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LI G C + +E +L M P + E++
Sbjct: 393 NALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELI 431
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 132/292 (45%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PNE Y +I ++ K ++ ++ KL YN + AG A
Sbjct: 422 PNERTYNELICGFSKRKHVHKAMTLLSKMLESKLT--PSLVTYNSLIHVQCKAGHFDSAY 479
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L + P T+++ ++ L +K E ++ S + G++ + L+ G
Sbjct: 480 KLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGH 539
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G ++ A +L+ ++C PN TY++L++G+C++G V+E ++E M G+
Sbjct: 540 CKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTV 599
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+ ILI + ++G + ++ +M G P+ +Y ++ EA+ ++ R
Sbjct: 600 ATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMAR 659
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI + P ++Y LI L D VLK+M+ G P +W ++
Sbjct: 660 MIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 116/223 (52%), Gaps = 2/223 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P++ Y++ I+ L ++KR + D+ +K EK + ++ + +I + AG+I +AI
Sbjct: 492 PDQWTYSVFIDTLCKSKRMEEACDLFNSLK-EKGIKANEVMYTALIDGHCK-AGKIDEAI 549
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M S +C P+ T+N ++ + E + + +K+GV+ IL++ +
Sbjct: 550 SLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEM 609
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
G+ + A V ++ +P+V TY+ +H C GNV+EA G++ RM G+ D+
Sbjct: 610 LREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDS 669
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
+T+ +LIS + G + +L+RM GC P+ + +++
Sbjct: 670 LTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLIW 712
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 131/241 (54%), Gaps = 6/241 (2%)
Query: 134 IKIYGNM-AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
I I GN AG+ +A+E L + ++ P V FN++++ L + ++ +
Sbjct: 67 ILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESS 126
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE--PNVRTYSTLMHGLCEKGNVE 250
V+ + N ++ GLC++GNLE A +L+E ++ + P++ TY+TL++ +
Sbjct: 127 RVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIR 186
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA E+M++ GI+ D +T NIL+SG+ K G VEE +++L+ MK G P+ +Y ++
Sbjct: 187 EACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSII 246
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ L + EA E++ M C SP V++ L+ G C ++ VL++M ++ +
Sbjct: 247 HALCVAGKVVEAAEILKTMSC---SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENIL 303
Query: 371 P 371
P
Sbjct: 304 P 304
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 140/311 (45%), Gaps = 9/311 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K NP+ ++++ + + + +I+ +K+ D YN I +AG
Sbjct: 196 KAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAG--PVPDVITYNSIIHALCVAG 253
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A E L M +C P + TFN +L+ A + + + + D
Sbjct: 254 KVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 310
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ GLC G ++ AFY+L+E +Q P+V Y++L+ GLC+ G +EEA L++ M
Sbjct: 311 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G V ++ L+SG + G V + ++L M P +Y VL GL+ +A
Sbjct: 371 GCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKA 430
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ ++ P V+Y LI GLC V + + +M +G P +G
Sbjct: 431 VSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPN----DVTLGS 486
Query: 383 VTFGKDNRNRV 393
V FG RV
Sbjct: 487 VVFGLCRVGRV 497
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 144/340 (42%), Gaps = 54/340 (15%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVE-KLCRFS---DGFFYNVIKIYGNMAGRI 144
P+ Y II+ L A + +I++ + L F+ DGF AG +
Sbjct: 237 PDVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFC---------KAGML 287
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY---TSAAKLGVEIDACCL 201
+A+E L +M N P V T+ +++N L G++Q + + G D
Sbjct: 288 PRALEVLEEMCRENILPDVITYTILVNGLCRV---GQVQVAFYLLEEIVRQGYIPDVIAY 344
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC++G +E A ++ E + C V YS+L+ G C GNV +A +L M S
Sbjct: 345 TSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVS 404
Query: 262 -----------------------------------EGIDADTVTFNILISGLRKQGKVEE 286
G D VT+N LI GL K +V E
Sbjct: 405 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVRE 464
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
L + M +GC+PN + V++GL R +A LV M +R +P+ V Y LI
Sbjct: 465 ACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLID 524
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
GLC ++D VL M QG +R+++ ++ G
Sbjct: 525 GLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHG 564
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 2/261 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ Y P+ YT +++ L ++ + +++ + V + CR + +++ Y AG
Sbjct: 334 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSV-RGCRTGVVMYSSLVSGYCR-AGN 391
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA E L +M S N P + T+N+VL L+ + + + G D N
Sbjct: 392 VHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNT 451
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+ + A + DE + C PN T +++ GLC G V++A+ L+ M +
Sbjct: 452 LIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKR 511
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ V + LI GL K ++++ +L+ M+G+G + +Y++++ + R EA
Sbjct: 512 HAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAM 571
Query: 324 ELVGRMICERMSPSFVSYKKL 344
+ M+ P + K L
Sbjct: 572 AMYDEMVARGFLPDGSTSKTL 592
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
V ++N +L++LV + + +Y G + IL++G C+ G A L
Sbjct: 27 VHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLR 86
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
+ + P+V ++ L+HGL + GN ++A L E MES + + VT+N +ISGL K G
Sbjct: 87 ALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSG 146
Query: 283 KVEEGMKLLERM--KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+E+ +LLE M KG P+ +Y ++ R EA +M ++P ++
Sbjct: 147 NLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLT 206
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ G+C VE+ +L M G VP + + I+
Sbjct: 207 CNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSII 246
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 2/181 (1%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G + D N LL L ++G+ V + C PN+ T+ L+ G C+ G A
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L ++ + D FN+LI GL K G ++ +KL E M+ P +Y V+ G
Sbjct: 82 LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141
Query: 313 LLDKKRFPEAKELVGRMICE--RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
L +A+EL+ MI + + +P V+Y LI+ + + +KM G
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201
Query: 371 P 371
P
Sbjct: 202 P 202
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 140/306 (45%), Gaps = 12/306 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-------YNVIK 135
K D PN + ++IN L + +R D ++ +++ + S+GF YN +
Sbjct: 332 KEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGE----SNGFLVEPDVITYNTLI 387
Query: 136 IYGNMAGRISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
GR + + + M S C P+ T+N +++ A + + ++ K GV
Sbjct: 388 DGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGV 447
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ LN L+ G+C++G + A +E + + N TY+ L+ C N+E+A
Sbjct: 448 PPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAME 507
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L + M G D + + LISGL + GK++ +L +MK G P+ S+ ++ G
Sbjct: 508 LFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFC 567
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
K + EA E++ M + P V+Y LI ++KKMV++G VP +
Sbjct: 568 RKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVV 627
Query: 375 MWREIV 380
+ ++
Sbjct: 628 TYGALI 633
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 3/260 (1%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N YT +I + ++ + +E C +Y +I AG++ +A
Sbjct: 485 NAVTYTALIRAFCNVNNIEKAMELFDEM-LEAGCSPDAIVYYTLISGLSQ-AGKLDRASF 542
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
L M P + +FN+++N E + G++ D N L+
Sbjct: 543 VLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFS 602
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-IDADT 268
+ G+ A ++ + K+ P V TY L+H C GN++EA + M S + +T
Sbjct: 603 KTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNT 662
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +NILI+ L ++ +V+ + L++ MK KG PN+ ++ + GL +K +A EL+ R
Sbjct: 663 VIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDR 722
Query: 329 MICERMSPSFVSYKKLIHGL 348
M +P +++ + L L
Sbjct: 723 MTEHACNPDYITMEILTEWL 742
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 3/216 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ +Y +I+ L+QA + D ++ ++K D +NV+ ++ +A
Sbjct: 518 SPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFS--PDIVSFNVLINGFCRKNKLDEA 575
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L +M + P T+N +++ + + K G+ L+
Sbjct: 576 YEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHA 635
Query: 208 LCENGNLEAAFYVL-DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
C NGNL+ A + D PN Y+ L++ LC K V+ A L++ M+ +G+
Sbjct: 636 YCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKP 695
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
+T TFN + GL+++ + + +L++RM C P+
Sbjct: 696 NTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPD 731
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 128/309 (41%), Gaps = 35/309 (11%)
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM- 154
L+ N+L ++R I +I+ + K GR+ A+ L +M
Sbjct: 180 LVYNELCPSRRLTHIRNILIDVLFRK--------------------GRVDDALHLLDEML 219
Query: 155 -PSYNCWPSVKTFNLVLNLLVSAKLYG------EIQGIYTSAAKLGVEIDACCLNILLKG 207
P P+ T ++V + L G EI G+ + A+ V ++ L L+
Sbjct: 220 QPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISR 279
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC +G + A+ VL K + + L+ L + LL M+ I +
Sbjct: 280 LCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPN 339
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKG-----CYPNSASYQEVLYGLLDKKRFPEA 322
VTF ILI+ L K +V+E +++ E+M G P+ +Y ++ GL R E
Sbjct: 340 VVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEG 399
Query: 323 KELVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV- 380
LV RM + R P+ V+Y LI G C ++E + +M + G P + +V
Sbjct: 400 LGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVD 459
Query: 381 GCVTFGKDN 389
G G+ N
Sbjct: 460 GMCKHGRIN 468
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K ++P+ + ++IN + + D ++++ ++E DG YN + + + G
Sbjct: 548 KEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLK--EMENAGIKPDGVTYNTLISHFSKTG 605
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-VEIDACCL 201
S A + M P+V T+ +++ E I+ + V +
Sbjct: 606 DFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIY 665
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ LC ++ A ++D+ + +PN T++ + GL EK + +AF L++RM
Sbjct: 666 NILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTE 725
Query: 262 EGIDADTVTFNILISGLRKQGKV 284
+ D +T IL L G+
Sbjct: 726 HACNPDYITMEILTEWLSAVGET 748
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 145/292 (49%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +++ +A+ K+FD + + + K+++L + YN++ +IS A+
Sbjct: 45 PSIVEFNKLLSAIAKMKKFDVVISLGE--KMQRLEIVHGLYTYNILINCFCRRSQISLAL 102
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M PS+ T + +LN K + + ++G D L+ GL
Sbjct: 103 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 162
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ A ++D ++ C+PN+ TY +++GLC++G+ + A LL +ME+ I+AD
Sbjct: 163 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 222
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V FN +I L K V++ + L + M+ KG PN +Y ++ L R+ +A +L+
Sbjct: 223 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 282
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI ++++P+ V++ LI + + + + M+++ P + + +V
Sbjct: 283 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 334
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 35/274 (12%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR S A + L DM P++ TFN +++ V + E + +Y K ++ D
Sbjct: 271 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 330
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C + L+ A + + ++C P+V TY+TL+ G C+ VE+ L M
Sbjct: 331 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 390
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ DTVT+ LI GL G + K+ ++M G P+ +Y +L GL + + +
Sbjct: 391 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 450
Query: 322 AKELVGRM------------------ICER-----------------MSPSFVSYKKLIH 346
A E+ M +C+ + P+ V+Y +I
Sbjct: 451 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 510
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
GLC+++L+++ +LKKM + G +P G + ++
Sbjct: 511 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 544
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 136/308 (44%), Gaps = 14/308 (4%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSD 127
R IS+ L + Y P+ + ++N KR DA+ + Q +++
Sbjct: 95 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM-------- 146
Query: 128 GFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
G+ + I + G + S+A+ + M C P++ T+ +V+N L
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ +E D N ++ LC+ +++ A + E + PNV TYS+L+
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC G +A LL M + I+ + VTFN LI K+GK E KL + M + P+
Sbjct: 267 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 326
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+Y ++ G R +AK++ M+ + P V+Y LI G C K VED + +
Sbjct: 327 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 386
Query: 363 KMVQQGFV 370
+M +G V
Sbjct: 387 EMSHRGLV 394
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 1/246 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ AI M PS+ FN +L+ + K + + + +L + N
Sbjct: 27 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C + A +L + K EP++ T S+L++G C + +A L+++M
Sbjct: 87 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G DT+TF LI GL K E + L++RM +GC PN +Y V+ GL + A
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ V + +I LC + V+D + K+M +G P + + ++ C
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266
Query: 383 V-TFGK 387
+ ++G+
Sbjct: 267 LCSYGR 272
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 8/266 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRF---DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K NPN + +I+ + +F + + D M + ++ D F YN + M
Sbjct: 286 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID-----PDIFTYNSLVNGFCMH 340
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ KA + M S +C+P V T+N ++ +K + ++ + G+ D
Sbjct: 341 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 400
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L++GL +G+ + A V + P++ TYS L+ GLC G +E+A + + M+
Sbjct: 401 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 460
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
I D + +I G+ K GKV++G L + KG PN +Y ++ GL K+ E
Sbjct: 461 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 520
Query: 322 AKELVGRMICERMSPSFVSYKKLIHG 347
A L+ +M + P+ +Y LI
Sbjct: 521 AYALLKKMKEDGPLPNSGTYNTLIRA 546
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 137/282 (48%), Gaps = 6/282 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++N L + D +++ +++ K+ +D +N I + A+
Sbjct: 185 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI--EADVVIFNTIIDSLCKYRHVDDAL 242
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M + P+V T++ +++ L S + + + + + + + N L+
Sbjct: 243 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 302
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G A + D+ K++ +P++ TY++L++G C +++A + E M S+ D
Sbjct: 303 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 362
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N LI G K +VE+G +L M +G ++ +Y ++ GL A+++ +
Sbjct: 363 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 422
Query: 329 MICERMSPSFVSYKKLIHGLCN----QKLVEDVDWVLKKMVQ 366
M+ + + P ++Y L+ GLCN +K +E D++ K ++
Sbjct: 423 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 464
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 123/285 (43%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ +T +I+ L + ++ R+ V++ C+ + Y V+ G
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQ-PNLVTYGVVVNGLCKRGDTDL 205
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ L M + V FN +++ L + + ++ G+ + + L+
Sbjct: 206 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 265
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC G A +L + ++ PN+ T++ L+ ++G EA L + M ID
Sbjct: 266 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 325
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T+N L++G ++++ ++ E M K C+P+ +Y ++ G KR + EL
Sbjct: 326 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 385
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + V+Y LI GL + ++ V K+MV G P
Sbjct: 386 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 430
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 1/178 (0%)
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL GL + L+ A + K P++ ++ L+ + + + L E+M+
Sbjct: 18 ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 76
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
I T+NILI+ ++ ++ + LL +M G P+ + +L G KR +A
Sbjct: 77 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 136
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LV +M+ P +++ LIHGL + ++ +MVQ+G P + + +V
Sbjct: 137 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 103/187 (55%), Gaps = 1/187 (0%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ G C+ G++ A V DE PK+ P V +++TL+ G C+ G+VEE F L ME
Sbjct: 251 FNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVME 310
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
SEG+ D TF+ LI+GL K+G+++EG L + M G+G PN ++ ++ G +
Sbjct: 311 SEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVD 370
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-RMGMWREI 379
A + M+ + + P V+Y LI+GLC +++ ++ +M G P ++ I
Sbjct: 371 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLI 430
Query: 380 VGCVTFG 386
GC G
Sbjct: 431 DGCCKDG 437
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 124/257 (48%), Gaps = 6/257 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE---IQGI 185
+F+NV+ AG + A ++P P+V +FN +++ + E ++G+
Sbjct: 249 YFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGV 308
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
S GV D + L+ GLC+ G L+ + DE + PN T++TL+ G C+
Sbjct: 309 MESE---GVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + M ++G+ D VT+N LI+GL K G ++E +L+ M G P+ +
Sbjct: 366 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKIT 425
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+ ++ G A E+ RM+ E + V++ LI GLC + V D +L M+
Sbjct: 426 FTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML 485
Query: 366 QQGFVPRMGMWREIVGC 382
GF P + ++ C
Sbjct: 486 SAGFKPDDPTYTMVIDC 502
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + FN++++ A G + ++ K G+ N L+ G C++G++E F +
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL 305
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ P+V T+S L++GLC++G ++E L + M G+ + VTF LI G K
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
GKV+ +K + M +G P+ +Y ++ GL EA+ LV M + P ++
Sbjct: 366 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKIT 425
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ LI G C +E + ++MV++G
Sbjct: 426 FTTLIDGCCKDGDMESALEIKRRMVEEG 453
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GV D N L+ GLC+ G+L+ A +++E +P+ T++TL+ G C+ G++E A
Sbjct: 383 GVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESA 442
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ RM EGI+ D V F LISGL ++G+V + ++L M G P+ +Y V+
Sbjct: 443 LEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDC 502
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K +L+ M + P V+Y L++GLC Q +++ +L M+ G P
Sbjct: 503 FCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAP 561
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 123/270 (45%), Gaps = 2/270 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ ++ +IN L + R D + + L +G + + G++ A+
Sbjct: 316 PDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGL--VPNGVTFTTLIDGQCKGGKVDLAL 373
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M + P + T+N ++N L E + + G++ D L+ G
Sbjct: 374 KNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGC 433
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++G++E+A + ++ E + ++ L+ GLC +G V +A +L M S G D
Sbjct: 434 CKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDD 493
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+ ++I K+G V+ G KLL+ M+ G P +Y ++ GL + + AK L+
Sbjct: 494 PTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDA 553
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
M+ ++P+ ++Y L+ G DVD
Sbjct: 554 MLNVGVAPNDITYNILLDGHSKHGSSVDVD 583
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S P V TF+ ++N L E ++ G+ + L+ G C+ G
Sbjct: 309 MESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGK 368
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A Q P++ TY+ L++GLC+ G+++EA L+ M + G+ D +TF
Sbjct: 369 VDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTT 428
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K G +E +++ RM +G + ++ ++ GL + R +A ++ M+
Sbjct: 429 LIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAG 488
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P +Y +I C + V+ +LK+M G VP
Sbjct: 489 FKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVP 526
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P + ++ LMHG C+ G+V A + + + G+ V+FN LISG K G VEEG +L
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL 305
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
M+ +G P+ ++ ++ GL + R E L M + P+ V++ LI G C
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETVDS 401
V+ + M+ QG P + + ++ G G R V E S
Sbjct: 366 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTAS 417
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 144/327 (44%), Gaps = 38/327 (11%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
+K+++Y + + Y +I L +++ + ++Q + +C + ++I++ GN A
Sbjct: 110 AKKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGN-A 168
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-VEIDACC 200
ISKA+ + + C P+ + +N ++ +L+ Y ++ +Y + G D
Sbjct: 169 KMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVT 228
Query: 201 LNILLKGLCENG-----------------------------------NLEAAFYVLDEFP 225
+ L+ C+ G N+ A + +E
Sbjct: 229 YSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMR 288
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
Q C P+V TY+ L+ GL + G +EA+ M EG DTV N +I+ L K G+++
Sbjct: 289 HQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLD 348
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLD-KKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ +KL E M C P+ +Y ++ L + K R E RM +SPS +Y L
Sbjct: 349 DAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSIL 408
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I G C E +L++M ++GF P
Sbjct: 409 IDGFCKTNRTEKAMMLLEEMDEKGFPP 435
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 137/317 (43%), Gaps = 38/317 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +I L +A RFD + ++ E CR N+I G AGR+ A+
Sbjct: 294 PDVFTYTELIRGLGKAGRFDEAYNFFHEMRREG-CRPDTVVINNMINFLGK-AGRLDDAV 351
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAK-LYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +M + C PSV T+N ++ L +K EI + G+ +IL+ G
Sbjct: 352 KLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDG 411
Query: 208 LCENGNLEAAFYVLDE-----FP-----------------------------KQNC-EPN 232
C+ E A +L+E FP K+NC +
Sbjct: 412 FCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSS 471
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
R Y+ ++ L + G +++A L + M G + +N L+SGL + G ++E + +
Sbjct: 472 ARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMR 531
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
RM+ GC P+ SY +L GL A E++ M + P VSY ++ + +
Sbjct: 532 RMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAG 591
Query: 353 LVEDVDWVLKKMVQQGF 369
L E+ ++K+M GF
Sbjct: 592 LFEEAAKLMKEMNVLGF 608
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 3/261 (1%)
Query: 89 PNEALYTLIINKLAQAK-RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y II L ++K R I +R+K + F Y+++ R KA
Sbjct: 364 PSVVTYNTIIKALFESKSRISEISSWFERMKGSGIS--PSPFTYSILIDGFCKTNRTEKA 421
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L +M P + +++ L AK Y ++ + A +++K
Sbjct: 422 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKH 481
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L + G L+ A + DE K C PNV Y+ LM GL G ++EA + RM+ G D
Sbjct: 482 LGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPD 541
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++NI+++GL K G M++L MK P++ SY VL + F EA +L+
Sbjct: 542 INSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMK 601
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M ++Y ++ +
Sbjct: 602 EMNVLGFEYDLITYSSILEAI 622
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P A Y +I+ L +AKR+D ++ Q +K + C S Y V+ + AGR+
Sbjct: 431 KGFPPCPAAYCSLIDALGKAKRYDIAHELFQELK--ENCGSSSARVYAVMIKHLGKAGRL 488
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+ +M C P+V +N +++ L A + E + G D NI+
Sbjct: 489 DDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNII 548
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GL + G A +L + +P+ +Y+T++ + G EEA L++ M G
Sbjct: 549 LNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGF 608
Query: 265 DADTVTFNILISGLRKQGKVE 285
+ D +T++ ++ + GKV+
Sbjct: 609 EYDLITYSSILEAI---GKVD 626
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 161/370 (43%), Gaps = 72/370 (19%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
SK+ Y + +Y +I L + ++F A+ +++ ++ E S F +++ + + A
Sbjct: 146 SKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFAS-A 204
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV--------------------------S 175
+ KAIE L +MP Y C P F +L+ L +
Sbjct: 205 RMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFT 264
Query: 176 AKLYG--------EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+ LYG E + + + G E D N LL G G + A+ +L E ++
Sbjct: 265 SLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRK 324
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
CEPNV +++TL+ LC K +EEA + M+S G AD VT+ LISG K GK+ +G
Sbjct: 325 ECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKG 384
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL------------------VGRM 329
+LL+ M +G PN +Y ++ K+ E EL V R+
Sbjct: 385 YELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRL 444
Query: 330 ICER-----------------MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV-- 370
C+ +SP ++ +IHG +Q+ + + K+MV +G +
Sbjct: 445 ACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSA 504
Query: 371 PRMGMWREIV 380
P+ G +E++
Sbjct: 505 PQYGTLKELL 514
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 12/244 (4%)
Query: 122 LCRFSDGFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
L + + F I +Y N+ AG++ A + L +M C P+V +F ++ L +
Sbjct: 283 LVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCA 342
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
K E ++ G DA L+ G C+ G + + +LD +Q PN T
Sbjct: 343 KKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMT 402
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y +M +K +EE L+E M G D +NI+I K G+++EG+++ M+
Sbjct: 403 YLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEME 462
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEA----KELVGRMICERMSPSFVSYKKLIHGLCNQ 351
G P ++ +++G L ++ EA KE+VGR + +P + + K+L++ L
Sbjct: 463 ATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLS--APQYGTLKELLNSLLRA 520
Query: 352 KLVE 355
+ +E
Sbjct: 521 EKLE 524
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 16/205 (7%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ + PN Y I+ + + + ++M+ ++ K+ D YN++ G
Sbjct: 393 QQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMR--KIGCTPDLNIYNIVIRLACKLGE 450
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQGI-YTSAAKLGVE 195
I + + +M + P + TF ++++ L+ + + + E+ G SA + G
Sbjct: 451 IKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGT- 509
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
L LL L LE + V + C+ NV ++ +H L G+V+EA
Sbjct: 510 -----LKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSY 564
Query: 256 LERMESEGIDADTVTFNILISGLRK 280
M G+ TF L+ GLRK
Sbjct: 565 CLDMMDAGVMPQPDTFAKLMRGLRK 589
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 134/281 (47%), Gaps = 2/281 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +T ++ A +R++ + Q++++ + D + + ++ R+S A+
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH--DLYSFTILIHCFCRCSRLSFAL 126
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M PS+ TF +L+ G+ + K G E + N L+ GL
Sbjct: 127 SVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGL 186
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+NG L A +L+E K+ +V TY+TL+ GLC G +A +L M I+ D
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VTF LI KQG ++E +L + M PN+ +Y ++ GL R +AK+
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
M + P+ V+Y LI G C ++V++ + ++M +GF
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 6/304 (1%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
++ +S++ ++ + + PN +Y +IN L + + + ++ +EK +D
Sbjct: 690 FQEAVSLVDSMDGFG----FVPNVVIYNTVINGLCKNRDLNNALEVFY--CMEKKGIRAD 743
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
YN + + +GR + A L DM P+V F +++ V E + +Y
Sbjct: 744 AVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYK 803
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ V + N L+ G C +G L A Y+ D + C P+V TY+TL+ G C+
Sbjct: 804 EMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSK 863
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
VE+ L M +G+ D T+N LI G + GK+ K+ RM G P+ +Y
Sbjct: 864 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 923
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+L L + + +A +V + M ++Y +I GLC +++ + + + ++
Sbjct: 924 ILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK 983
Query: 368 GFVP 371
G P
Sbjct: 984 GVKP 987
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 137/325 (42%), Gaps = 37/325 (11%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+ Y PN +Y +I+ L + + +++ ++EK +D YN + +GR
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLN--EMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
S A L DM + P V TF ++++ V E Q +Y + V+ + N
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM----------------------- 240
++ GLC +G L A D + C PNV TY+TL+
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 241 ------------HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
HG C+ G + A + M S + D +T IL+ GL G++E +
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ M+ Y +Y +++GL + +A EL R+ E + P +Y +I GL
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRM 373
C + D ++++M ++G + +M
Sbjct: 467 CKNGPRREADELIRRMKEEGIICQM 491
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
KLG E LL G C + AF ++ K EPNV Y+TL+ GLC+ G +
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A LL ME +G+ AD VT+N L++GL G+ + ++L M + P+ ++ ++
Sbjct: 194 IALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ + EA+EL MI + P+ V+Y +I+GLC + D M +G
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 371 PRMGMWREIV 380
P + + ++
Sbjct: 314 PNVVTYNTLI 323
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 109/243 (44%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
R +A+ + M + P+V +N V+N L + ++ K G+ DA
Sbjct: 687 GNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT 746
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ GL +G A +L + K+ +PNV ++ L+ ++GN+ EA L + M
Sbjct: 747 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 806
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ + T+N LI+G G + + + + M KGC+P+ +Y ++ G KR
Sbjct: 807 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 866
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ +L M + + +Y LIHG C + V +MV G P + + ++
Sbjct: 867 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 926
Query: 381 GCV 383
C+
Sbjct: 927 DCL 929
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 5/263 (1%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R A F+M PS+ F +L + + Y + G+ D
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C L A VL + K EP++ T+ +L+HG C + +AF L+ M
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + + V +N LI GL K G++ ++LL M+ KG + +Y +L GL R+ +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
++ M+ ++P V++ LI Q +++ + K+M+Q P + I+
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN- 289
Query: 383 VTFGKDNRNRVY-VTETVDSLAS 404
G R+Y +T D +AS
Sbjct: 290 ---GLCMHGRLYDAKKTFDLMAS 309
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 18/315 (5%)
Query: 48 YKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
Y ++H D S T ++ F +SVL + K Y P+ + +++ R
Sbjct: 100 YGISH-DLYSFTILIHCFCRCSRLSFALSVLGKMMKL-GYEPSIVTFGSLLHGFCLVNRI 157
Query: 108 -DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------GRISKAIETLFDMPSYNCW 160
DA ++ +K G+ NV+ +Y + G ++ A+E L +M
Sbjct: 158 GDAFSLVILMVK--------SGYEPNVV-VYNTLIDGLCKNGELNIALELLNEMEKKGLG 208
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
V T+N +L L + + + + K + D L+ + GNL+ A +
Sbjct: 209 ADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
E + + +PN TY+++++GLC G + +A + M S+G + VT+N LISG K
Sbjct: 269 YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
V+EGMKL +RM +G + +Y +++G + A ++ M+ R++P ++
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Query: 341 YKKLIHGLCNQKLVE 355
+ L+HGLC +E
Sbjct: 389 HCILLHGLCVNGEIE 403
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 14/233 (6%)
Query: 84 RKDYNPNEALYTLIINK------LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
R+ PN Y +IN L AK M + V K C F D YN +
Sbjct: 807 RRSVVPNVFTYNSLINGFCIHGCLGDAK-------YMFDLMVSKGC-FPDVVTYNTLITG 858
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+ R+ ++ +M T+N +++ A Q ++ GV D
Sbjct: 859 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 918
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
NILL LC NG +E A ++++ K + ++ TY+ ++ GLC ++EA+ L
Sbjct: 919 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 978
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+ +G+ D + + +ISGL ++G E KL RMK G P+ Y E L
Sbjct: 979 SLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 1031
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 35/255 (13%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ F VL ++ + + +Y LG+ D IL+ C L A +
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER---------------------- 258
L + K P++ T +L++G C+ +EA L++
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721
Query: 259 -------------MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
ME +GI AD VT+N LISGL G+ + +LL M + PN
Sbjct: 722 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+ ++ + + EA+ L MI + P+ +Y LI+G C + D ++ MV
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841
Query: 366 QQGFVPRMGMWREIV 380
+G P + + ++
Sbjct: 842 SKGCFPDVVTYNTLI 856
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G + E AF + E P++ ++ L+ E ++ME G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +F ILI + ++ + +L +M G P+ ++ +L+G R +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
LV M+ P+ V Y LI GLC + +L +M ++G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL 207
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%)
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ AF + E + P++ ++ ++ + + + L +ME+ GI D +F I
Sbjct: 585 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 644
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI + ++ + LL +M G P+ + +L G RF EA LV M
Sbjct: 645 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 704
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
P+ V Y +I+GLC + + + V M ++G
Sbjct: 705 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 739
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 60/142 (42%)
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L G E+AF L M V F L++ + E + ++M+ G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
+ S+ +++ R A ++G+M+ PS V++ L+HG C + D
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 359 WVLKKMVQQGFVPRMGMWREIV 380
++ MV+ G+ P + ++ ++
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLI 183
>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
Length = 466
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 150/320 (46%), Gaps = 40/320 (12%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK +PNEA ++++I+ L Q D+ ++++++ EK D YN+I + GR
Sbjct: 137 RKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQM--EKYGCEPDTVNYNIIINSLSERGR 194
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ L M C P FN VL A+ + + + + + NI
Sbjct: 195 VDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNI 251
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM---- 259
L+ LC+NG + A V ++ P+ C P++ TYS+L++G E+G VE A L M
Sbjct: 252 LIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKP 311
Query: 260 --------------------------ESEGIDA--DTVTFNILISGLRKQGKVEEGMKLL 291
E G D + VTFNILI+ L ++G V+ +++L
Sbjct: 312 DIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVL 371
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E+M G P+ +Y ++ G ++ R +A +L+ M C+ P +SY + GLC
Sbjct: 372 EQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRA 428
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
+ +D + ++ +M++ P
Sbjct: 429 ERWQDAEELVAEMLRNKCTP 448
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 135/261 (51%), Gaps = 10/261 (3%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ + ++ +A+R+ DA E I Q + + C + F +I + G ++ A
Sbjct: 209 PDALGFNAVLKGFCRAERWHDASELIAQMFRDD--CPLIEMTFNILIDMLCQ-NGLVNYA 265
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ MP Y C P + T++ +LN L ++ S + + D N +LKG
Sbjct: 266 TQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRS---MPCKPDIFSYNAVLKG 322
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC E A ++ E ++C PN T++ L++ LC+KG V+ A +LE+M + G D
Sbjct: 323 LCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 382
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+N LI+G +QG++++ +KLL M C P++ SY L GL +R+ +A+ELV
Sbjct: 383 IFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVA 439
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M+ + +P+ V++K H L
Sbjct: 440 EMLRNKCTPNEVTFKYANHLL 460
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 8/292 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y + L A+R++ I ++M + V K C ++ F +I + A+
Sbjct: 107 PNTVCYNAALKGLCIAERWEDIGELMAEM-VRKGCSPNEATFSMLISSLCQ-NNLVDSAV 164
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M Y C P +N+++N L G + + + DA N +LKG
Sbjct: 165 EVLEQMEKYGCEPDTVNYNIIINSLSER---GRVDDALRLLNSMVCKPDALGFNAVLKGF 221
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C A ++ + + +C T++ L+ LC+ G V A + E+M D
Sbjct: 222 CRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDI 281
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ L++G +QG VE ++L M C P+ SY VL GL R+ +A EL+
Sbjct: 282 VTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAE 338
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + P+ V++ LI+ LC + LV+ VL++M G P + + ++
Sbjct: 339 MVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 390
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 135/283 (47%), Gaps = 8/283 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L AK+++ E + + C ++ F I+ + G + +A+
Sbjct: 5 PDTYTYNTVLKGLCIAKKWEEAE-ELMAEMIRNRCPPNEVTFATQIRSFCQ-NGLLDRAV 62
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L MP Y C P V ++ ++N G + + + + C N LKGL
Sbjct: 63 QLLDQMPRYGCTPDVVIYSTLINGFSEQ---GHVDQALDLLNTMLCKPNTVCYNAALKGL 119
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C E ++ E ++ C PN T+S L+ LC+ V+ A +LE+ME G + DT
Sbjct: 120 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 179
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +NI+I+ L ++G+V++ ++LL M C P++ + VL G +R+ +A EL+ +
Sbjct: 180 VNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQ 236
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + +++ LI LC LV V ++M + P
Sbjct: 237 MFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTP 279
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ F+ +L + K Y + +Y G+ + LNIL+ C L AF V
Sbjct: 52 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 111
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K +P+ T++TL+ GLC +G + EA L ++M EG D +T+ LI+GL K
Sbjct: 112 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 171
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++ L M+ + C P Y ++ L ++ EA L M+ + +SP+ +
Sbjct: 172 VGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFT 231
Query: 341 YKKLIHGLC 349
Y LIHGLC
Sbjct: 232 YSSLIHGLC 240
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ + T N+++N G + KLG + L++GLC G
Sbjct: 80 MDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGK 139
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A + D+ + +P+V TY TL++GLC+ GN A L ME V ++
Sbjct: 140 IGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYST 199
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I L K ++ E + L M KG PN+ +Y +++GL + EA L MI +
Sbjct: 200 IIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 259
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P +++ L+ LC + +V +V+ M+Q P + + ++
Sbjct: 260 IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLM 306
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 163/373 (43%), Gaps = 26/373 (6%)
Query: 14 SIIQSLSSASTITRKRTFALASPSASHQDS---DHHAYKLNHKDWLSPTEVLKIFSNLRD 70
SI+ ++ITR + ++ DS H+ Y LN ++ F +L
Sbjct: 53 SIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLN--------ILINSFCHLNR 104
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
SVL K Y P+ A +T +I L + + ++ E GF
Sbjct: 105 LGFAFSVLGDILKLG-YQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE-------GFQ 156
Query: 131 YNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
+V+ YG + G S AI L M NC P+V ++ +++ L + E
Sbjct: 157 PDVLT-YGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALS 215
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+++ G+ + + L+ GLC G+ + A + + P+ T++TL+ LC
Sbjct: 216 LFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALC 275
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G V +A +++ M + D VT+N L+ G + ++ + + + + M KGC P+
Sbjct: 276 KEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVI 335
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
SY ++ G + +A L M + + P V+Y LIHGLC+ + D + +M
Sbjct: 336 SYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM 395
Query: 365 VQQGFVPRMGMWR 377
V G +P + +R
Sbjct: 396 VVYGQIPDLVTYR 408
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 98/223 (43%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA+ +M P T+N +++ L + ++ G D I
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 409
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L LC+N L A +L N +P++ YS +M G+C G +E A L ++ S+G
Sbjct: 410 LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 469
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D T+ I+I+GL +QG + E KL M GC PN+ +Y + G L A
Sbjct: 470 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAI 529
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+L M+ S + L+ L + L + V +L + VQ
Sbjct: 530 QLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + KA + M + P V T+N +++ G+ ++ + + G
Sbjct: 278 GMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISY 337
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G C+ ++ A + +E +Q P+ TY+TL+HGLC G + +A L M
Sbjct: 338 TTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVV 397
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D VT+ IL L K ++ E M LL+ ++G P+ Y V+ G+
Sbjct: 398 YGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEA 457
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A++L ++ + + P +Y +I+GLC Q L+ + + +M + G P
Sbjct: 458 ARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSP 507
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 77/168 (45%)
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
++ A + + + P++ +S L+ + + L ++M+S GI +T T N
Sbjct: 34 TIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLN 93
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
ILI+ ++ +L + G P++A++ ++ GL + + EA +L +M E
Sbjct: 94 ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE 153
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P ++Y LI+GLC L+ M Q+ P + ++ I+
Sbjct: 154 GFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTII 201
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 4/195 (2%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y +I+ L R DAI + + ++ D Y ++ Y R+++A
Sbjct: 367 PDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQI---PDLVTYRILFDYLCKNHRLAEA 423
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L + N P + +++V++ + A + +++ + G+ D I++ G
Sbjct: 424 MVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMING 483
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G L A + E + C PN TY+ + G A L + M S G D
Sbjct: 484 LCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSID 543
Query: 268 TVTFNILISGLRKQG 282
T +L+ L G
Sbjct: 544 VSTTTLLVEMLSDDG 558
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 161/370 (43%), Gaps = 72/370 (19%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
SK+ Y + +Y +I L + ++F A+ +++ ++ E S F +++ + + A
Sbjct: 113 SKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFAS-A 171
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV--------------------------S 175
+ KAIE L +MP Y C P F +L+ L +
Sbjct: 172 RMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFT 231
Query: 176 AKLYG--------EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+ LYG E + + + G E D N LL G G + A+ +L E ++
Sbjct: 232 SLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRK 291
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
CEPNV +++TL+ LC K +EEA + M+S G AD VT+ LISG K GK+ +G
Sbjct: 292 ECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKG 351
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL------------------VGRM 329
+LL+ M +G PN +Y ++ K+ E EL V R+
Sbjct: 352 YELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRL 411
Query: 330 ICE-----------------RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV-- 370
C+ +SP ++ +IHG +Q+ + + K+MV +G +
Sbjct: 412 ACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSA 471
Query: 371 PRMGMWREIV 380
P+ G +E++
Sbjct: 472 PQYGTLKELL 481
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 12/244 (4%)
Query: 122 LCRFSDGFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
L + + F I +Y N+ AG++ A + L +M C P+V +F ++ L +
Sbjct: 250 LVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCA 309
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
K E ++ G DA L+ G C+ G + + +LD +Q PN T
Sbjct: 310 KKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMT 369
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y +M +K +EE L+E M G D +NI+I K G+++EG+++ M+
Sbjct: 370 YLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEME 429
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEA----KELVGRMICERMSPSFVSYKKLIHGLCNQ 351
G P ++ +++G L ++ EA KE+VGR + +P + + K+L++ L
Sbjct: 430 ATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLS--APQYGTLKELLNSLLRA 487
Query: 352 KLVE 355
+ +E
Sbjct: 488 EKLE 491
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 4/194 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y I+ + + + ++M+ ++ K+ D YN++ G I + +
Sbjct: 365 PNPMTYLHIMAAHEKKEELEECIELMEEMR--KIGCTPDLNIYNIVIRLACKLGEIKEGV 422
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV--EIDACCLNILLK 206
+M + P + TF ++++ +S + E + G+ L LL
Sbjct: 423 RVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLN 482
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
L LE + V + C+ NV ++ +H L G+V+EA M G+
Sbjct: 483 SLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMP 542
Query: 267 DTVTFNILISGLRK 280
TF L+ GLRK
Sbjct: 543 QPDTFAKLMRGLRK 556
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 134/281 (47%), Gaps = 2/281 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +T ++ A +R++ + Q++++ + D + + ++ R+S A+
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH--DLYSFTILIHCFCRCSRLSFAL 126
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M PS+ TF +L+ G+ + K G E + N L+ GL
Sbjct: 127 SVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGL 186
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+NG L A +L+E K+ +V TY+TL+ GLC G +A +L M I+ D
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VTF LI KQG ++E +L + M PN+ +Y ++ GL R +AK+
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
M + P+ V+Y LI G C ++V++ + ++M +GF
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 137/325 (42%), Gaps = 37/325 (11%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+ Y PN +Y +I+ L + + +++ ++EK +D YN + +GR
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLN--EMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
S A L DM + P V TF ++++ V E Q +Y + V+ + N
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM----------------------- 240
++ GLC +G L A D + C PNV TY+TL+
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 241 ------------HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
HG C+ G + A + M S + D +T IL+ GL G++E +
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ M+ Y +Y +++GL + +A EL R+ E + P +Y +I GL
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRM 373
C + D ++++M ++G + +M
Sbjct: 467 CKNGPRREADELIRRMKEEGIICQM 491
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
KLG E LL G C + AF ++ K EPNV Y+TL+ GLC+ G +
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A LL ME +G+ AD VT+N L++GL G+ + ++L M + P+ ++ ++
Sbjct: 194 IALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ + EA+EL MI + P+ V+Y +I+GLC + D M +G
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 371 PRMGMWREIV 380
P + + ++
Sbjct: 314 PNVVTYNTLI 323
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 5/263 (1%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R A F+M PS+ F +L + + Y + G+ D
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C L A VL + K EP++ T+ +L+HG C + +AF L+ M
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + + V +N LI GL K G++ ++LL M+ KG + +Y +L GL R+ +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
++ M+ ++P V++ LI Q +++ + K+M+Q P + I+
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN- 289
Query: 383 VTFGKDNRNRVY-VTETVDSLAS 404
G R+Y +T D +AS
Sbjct: 290 ---GLCMHGRLYDAKKTFDLMAS 309
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 18/315 (5%)
Query: 48 YKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
Y ++H D S T ++ F +SVL + K Y P+ + +++ R
Sbjct: 100 YGISH-DLYSFTILIHCFCRCSRLSFALSVLGKMMKL-GYEPSIVTFGSLLHGFCLVNRI 157
Query: 108 -DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------GRISKAIETLFDMPSYNCW 160
DA ++ +K G+ NV+ +Y + G ++ A+E L +M
Sbjct: 158 GDAFSLVILMVK--------SGYEPNVV-VYNTLIDGLCKNGELNIALELLNEMEKKGLG 208
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
V T+N +L L + + + + K + D L+ + GNL+ A +
Sbjct: 209 ADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
E + + +PN TY+++++GLC G + +A + M S+G + VT+N LISG K
Sbjct: 269 YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
V+EGMKL +RM +G + +Y +++G + A ++ M+ R++P ++
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Query: 341 YKKLIHGLCNQKLVE 355
+ L+HGLC +E
Sbjct: 389 HCILLHGLCVNGEIE 403
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G + E AF + E P++ ++ L+ E ++ME G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +F ILI + ++ + +L +M G P+ ++ +L+G R +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
LV M+ P+ V Y LI GLC + +L +M ++G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL 207
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 60/142 (42%)
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L G E+AF L M V F L++ + E + ++M+ G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
+ S+ +++ R A ++G+M+ PS V++ L+HG C + D
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 359 WVLKKMVQQGFVPRMGMWREIV 380
++ MV+ G+ P + ++ ++
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLI 183
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 112/237 (47%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I AI + M PS FN +L + K + + + G+ + L+I
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C + AF VL + K +P+ T++TL+ G+C +G + EA L ++M EG
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D VT+ LI+GL K G ++LL M K C PN +Y ++ L ++ EA
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L M+ + +SP +Y LIH LCN + V +L +MV +P + + +V
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 143/310 (46%), Gaps = 21/310 (6%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ Y +IN L + A ++ + V+K C+ + F YN I ++++
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSM-VQKNCQ-PNVFAYNTIIDSLCKDRQVTE 219
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A +M + P + T+N +++ L + + + + + D N ++
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G + A V+D+ ++ EPNV TY+ LM G C ++EA + + M +G
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP 339
Query: 267 DTVTFNILISGLRKQGKVE-------------------EGMKLLERMKGKGCYPNSASYQ 307
+ +++N LI+G K +++ E +K+ + M KGC PN SY
Sbjct: 340 NVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYN 399
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G +R +A L G M + + P V+Y LIHGLC+ + ++D + +MV
Sbjct: 400 TLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVAC 459
Query: 368 GFVPRMGMWR 377
+P + +R
Sbjct: 460 SQIPNLVTYR 469
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 2/245 (0%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ P++ T ++++N G + KLG + D L++G+C G
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGK 146
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A ++ D+ + P+V TY TL++GLC+ GN A LL M + + +N
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I L K +V E L M KG P+ +Y +++ L + + L+ M+ +
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRN 391
+ P VS+ ++ LC + V + V+ KM+Q+G P + + ++ C+ D
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326
Query: 392 RVYVT 396
+V+ T
Sbjct: 327 KVFDT 331
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 142/319 (44%), Gaps = 33/319 (10%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------ 140
+ P+ A +T +I + + + ++ +GF +V+ YG +
Sbjct: 127 HQPDTATFTTLIRGICVEGKIGEALHLFDKM-------IGEGFRPDVVT-YGTLINGLCK 178
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G S AI L M NC P+V +N +++ L + E +++ G+ D
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ LC + +L+E P+V +++T++ LC++G V EA ++++M
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR-- 318
G++ + VT+ L+ G +++E +K+ + M KGC PN SY ++ G +R
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358
Query: 319 -----------------FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
EA ++ M+C+ P+ +SY LI+G C + ++ ++
Sbjct: 359 KAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF 418
Query: 362 KKMVQQGFVPRMGMWREIV 380
+M +Q +P + ++
Sbjct: 419 GEMCRQELIPDTVTYSTLI 437
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 111/239 (46%), Gaps = 2/239 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ A L + P TF L+ + V K+ GE ++ G D
Sbjct: 111 RVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKI-GEALHLFDKMIGEGFRPDVVTY 169
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC+ GN AA +L ++NC+PNV Y+T++ LC+ V EAF L M +
Sbjct: 170 GTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVT 229
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI D T+N LI L + + LL M P+ S+ V+ L + + E
Sbjct: 230 KGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTE 289
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ++V +MI + P+ V+Y L+ G C +++ V MV +G +P + + ++
Sbjct: 290 AHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 142/345 (41%), Gaps = 44/345 (12%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + ++ NL + V ++LN+ K P+ + +++ L + + D+
Sbjct: 235 DIFTYNSLIHALCNLCEWKHVATLLNEMVDSK-IMPDVVSFNTVVDALCKEGKVTEAHDV 293
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGR-----ISKAIETLFDMPSYNCWPSVKTFNL 168
+ ++ G NV+ M G + +A++ M C P+V ++N
Sbjct: 294 VDKM-------IQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNT 346
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL-------------------------NI 203
++N Y +IQ I + + CC N
Sbjct: 347 LING------YCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNT 400
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C+ ++ A Y+ E +Q P+ TYSTL+HGLC +++A L M +
Sbjct: 401 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 460
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+ IL+ L K + E M LL+ ++G P+ + G+ A+
Sbjct: 461 QIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAAR 520
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+L + + + P +Y +I+GLC + L+++ + ++M + G
Sbjct: 521 DLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 565
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 125/300 (41%), Gaps = 27/300 (9%)
Query: 89 PNEALYTLIINKLAQAKRFD-AIE------------DIMQRIKV--EKLCRFSDGFFYNV 133
PN Y +IN + +R D AI ++ + +KV +C+ G NV
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCK---GCMPNV 395
Query: 134 IKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
I + G RI KA+ +M P T++ +++ L + + ++
Sbjct: 396 ISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE 455
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ ILL LC+N L A +L N +P+++ + + G+C G
Sbjct: 456 MVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGE 515
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+E A L + S+G+ D T++I+I+GL ++G ++E KL M GC N Y
Sbjct: 516 LEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNT 575
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ G L A +L+ M+ S + + L + L D LK++++ G
Sbjct: 576 ITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL----DQSLKQILRNG 631
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 150/327 (45%), Gaps = 38/327 (11%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
+KR++Y + + Y +I+ L +++ + ++Q + +C + +V+++ GN A
Sbjct: 81 AKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGN-A 139
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-VEIDACC 200
+ +AI + + + C P + +N ++ +L+ Y ++ +Y + G D
Sbjct: 140 KMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVT 199
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPK---------------------------------- 226
+ L+ C+ G ++A +L+E +
Sbjct: 200 YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMR 259
Query: 227 -QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
Q C P+V TY+ L+ GL + G ++EA+ M+ EG DTV N +I+ L K G+++
Sbjct: 260 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLD 319
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLD-KKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ MKL + M+ C P+ +Y ++ L + K R E RM +SPS +Y L
Sbjct: 320 DAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSIL 379
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I G C +E +L++M ++GF P
Sbjct: 380 IDGFCKTNRMEKAMMLLEEMDEKGFPP 406
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 151/348 (43%), Gaps = 41/348 (11%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDY-NPNEALYTLIINKLAQAKRFDAIEDIMQRI 117
T ++ +F D +S+ + R Y P+ YT +I L +A R D +
Sbjct: 236 TMLIALFFKFNDAHGALSLFEEM--RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEM 293
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
+ E CR F N+I G AGR+ A++ +M + C PSV T+N ++ L +K
Sbjct: 294 QREG-CRPDTVFMNNMINFLGK-AGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESK 351
Query: 178 LYG-EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE-----FP------ 225
E+ + + G+ + +IL+ G C+ +E A +L+E FP
Sbjct: 352 SRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAY 411
Query: 226 -----------------------KQNC-EPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
K+NC + R Y+ ++ L + G +++A + + M
Sbjct: 412 CSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNK 471
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D +N L+SGL + G ++E + + RM+ GC P+ SY +L GL
Sbjct: 472 LGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHR 531
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A E++ M + P VSY ++ L + + E+ ++K+M GF
Sbjct: 532 AMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGF 579
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 3/261 (1%)
Query: 89 PNEALYTLIINKLAQAK-RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y II L ++K R + +R+K + S F Y+++ R+ KA
Sbjct: 335 PSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSS--FTYSILIDGFCKTNRMEKA 392
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L +M P + +++ L AK Y ++ + A +++K
Sbjct: 393 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKH 452
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L + G L+ A + DE K C P+V Y+ LM GL G ++EA + RM+ G D
Sbjct: 453 LGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD 512
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++NI+++GL K G M++L MK P+ SY VL L F EA +L+
Sbjct: 513 INSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMK 572
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M ++Y ++ +
Sbjct: 573 EMNTLGFEYDLITYSSILEAI 593
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 5/201 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P A Y +I+ L +AKR+D ++ Q +K + C S Y V+ + AGR+
Sbjct: 402 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELK--ENCGSSSARVYAVMIKHLGKAGRL 459
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
AI +M C P V +N +++ L + E + G D NI+
Sbjct: 460 DDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNII 519
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GL + G A +L + P+V +Y+T++ L G EEA L++ M + G
Sbjct: 520 LNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGF 579
Query: 265 DADTVTFNILISGLRKQGKVE 285
+ D +T++ ++ + GKV+
Sbjct: 580 EYDLITYSSILEAI---GKVD 597
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T N++LN KLG E D LL G C + A Y+ D
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRM 177
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ EPNV Y+T++ GLC+ V+ A LL RME +GI D VT+N LISGL G+
Sbjct: 178 VEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRW 237
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
++ +++ M + YP+ ++ ++ + + R EA+EL MI + P V+Y L
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLL 297
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I+GLC +++ + + MV +G P
Sbjct: 298 IYGLCMYSRLDEAEQMFGFMVSKGCFP 324
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 132/285 (46%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN +Y II+ L ++K+ D D++ R++V+ + D YN + +GR
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGI--RPDAVTYNSLISGLCNSGRWDD 239
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A + M +P V TFN +++ V E + +Y + ++ D ++L+
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIY 299
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC L+ A + + C P+V TYS L++G C+ VE L M G+
Sbjct: 300 GLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+TVT+ +LI G + GK+ ++ + M G PN +Y +L+GL D + +A ++
Sbjct: 360 NTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M M V+Y +I G+C V D + + +G P
Sbjct: 420 ADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTP 464
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 137/286 (47%), Gaps = 10/286 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKV----EKLCRFSDGFFYNVIKIYGNMAGRI 144
P+ A ++ +++ +++ K++D + + +++++ LC N++ ++
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC------NILLNCFCRCSQL 132
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S A+ L M P + TF +LN + ++ ++G E + N +
Sbjct: 133 SLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTI 192
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC++ ++ A +L+ P+ TY++L+ GLC G ++A ++ M I
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREI 252
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D TFN LI K+G++ E +L E M + P+ +Y ++YGL R EA++
Sbjct: 253 YPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQ 312
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ G M+ + P V+Y LI+G C K VE + +M Q+G V
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI A+ M P+V +N +++ L +K + G+ DA N
Sbjct: 166 RIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYN 225
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC +G + A ++ K+ P+V T++ L+ ++G + EA L E M
Sbjct: 226 SLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRR 285
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+D D VT+++LI GL +++E ++ M KGC+P+ +Y ++ G K+
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+L M + + V+Y LI G C + + + K MV G P +
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNI 396
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 2/219 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ +P+ Y+L+I L R D E M V K C F D Y+++ + +
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEQ-MFGFMVSKGC-FPDVVTYSILINGYCKSKK 341
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ ++ +M + T+ +++ A + I+ GV + N+
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNV 401
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC+NG +E A +L + K + ++ TY+ ++ G+C+ G V +A+ L + +G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKG 461
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
+ D T+ ++ GL K+G E L +MK G PN
Sbjct: 462 LTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 52/110 (47%)
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
F+ L+S + K K + + L E+M+ G N + +L + A +G+M+
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMM 143
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P V++ L++G C + D ++ +MV+ G+ P + ++ I+
Sbjct: 144 KLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTII 193
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 149/348 (42%), Gaps = 37/348 (10%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L+P V + N +D ++ Y+ YTL+I +LA A+ DA+ I+
Sbjct: 147 LNPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILT 206
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
+ E R S ++++ +G+ +S A+E M S+ C PS +N VL LLV
Sbjct: 207 AMWKEGH-RISMHLLTSLLRTFGS-TNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVK 264
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNI-------------------------------- 203
Y ++ + ++ DA I
Sbjct: 265 GGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHT 324
Query: 204 ---LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ L ++GN++ A + C PNV TY+TL++GL + G +EEA + M+
Sbjct: 325 FTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMK 384
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
D + +N LI GL K G+ + L + MK +G PN +Y ++ L R P
Sbjct: 385 ENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQP 444
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
EA +L + + P +Y LI L ++ V ++K+MV++G
Sbjct: 445 EAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 136/289 (47%), Gaps = 2/289 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + P Y +++ L + ++ D I ++ L D F YN++ +
Sbjct: 660 KEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLV--PDTFVYNIMVNGLVKSN 717
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ +A + + M + N P + T+ +L+ L + E ++T + G E D
Sbjct: 718 RVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYT 777
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ L + G L A + K+ C P+V TYS+L+ L ++G VEEA+ E S+
Sbjct: 778 SLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISK 837
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + ++ LI K+G V+ ++L E M+ + C PN +Y +L GL R A
Sbjct: 838 GCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVA 897
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++L+ M P V+Y LI G+ +V++ + K+M ++G VP
Sbjct: 898 EKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVP 946
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 2/289 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K ++ P+ YT +++ L ++ R + ++ ++ E D Y + G
Sbjct: 730 KNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG--HEPDVVAYTSLMDVLGKGG 787
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++S A+ M C P V T++ +++ L E + ++ G + +
Sbjct: 788 KLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYS 847
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ + G ++ A + +E ++ C PN+ TY+ L+ GL + G + A LLE ME
Sbjct: 848 SLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKV 907
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D VT+NILI G+ K G V+E +RMK KG P+ ++ ++ L + EA
Sbjct: 908 GCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEA 967
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EL M E +PS V+Y LI L V + + +M +G +P
Sbjct: 968 CELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMP 1016
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 4/284 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +Y +++N L ++ R D ++ +K + + D F Y + +GR+ +A
Sbjct: 701 PDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNI--LPDLFTYTSLLDGLGKSGRLEEAF 758
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M P V + ++++L I+ + AK D + L+ L
Sbjct: 759 NMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSL 818
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G +E A+Y + + C PNV YS+L+ +KG V+ A L E M+ +
Sbjct: 819 GKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNI 878
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N L+SGL K G++ KLLE M+ GC P+ +Y ++ G+ EA+ R
Sbjct: 879 VTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKR 938
Query: 329 MICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVLKKMVQQGFVP 371
M + + P +++ LI L KL+E + + M ++G+ P
Sbjct: 939 MKEKGIVPDVITFTSLIESLGKVDKLLEACE-LFDSMEEEGYNP 981
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 136/320 (42%), Gaps = 33/320 (10%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + +P+ Y +I+ L +A D + + +K L + YN++ AG
Sbjct: 384 KENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLV--PNLRTYNIMISVLGKAG 441
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE------- 195
R +A + D+ P V T+N ++++L ++ I + G E
Sbjct: 442 RQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDS 501
Query: 196 ------------------------IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
+ N L+ NG+++ A +L+ K C P
Sbjct: 502 NAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIP 561
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
V TY+TL+ GL + G ++EA LL ME +G + VT++ L++ K+ + EE + L
Sbjct: 562 TVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLF 621
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ M KGC + ++Y V+ L +A ++ GRM E M P +YK L+ L
Sbjct: 622 DEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKD 681
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
+ ++ + ++ + VP
Sbjct: 682 EKIDFALQIFNELQESSLVP 701
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 140/324 (43%), Gaps = 33/324 (10%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN YT ++N LA+A R + ++ +K E C D YN + AG A
Sbjct: 354 SPNVVTYTTLVNGLAKAGRLEEACEVFVEMK-ENNCS-PDAIAYNTLIDGLGKAGEADMA 411
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M P+++T+N+++++L A E ++ + G D N L+
Sbjct: 412 CGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDV 471
Query: 208 LCENGNLEAAFYVLDEFPKQNCE------------------------PNVR-------TY 236
L + G ++ ++ E ++ E P++ TY
Sbjct: 472 LGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITY 531
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+TLM G+V+EA LLE M+ VT+ L+ GL K G+++E + LL M+
Sbjct: 532 NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEK 591
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+GC P+ +Y ++ + + E+ L M+ + +Y +I+ LC V+
Sbjct: 592 QGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQ 651
Query: 357 VDWVLKKMVQQGFVPRMGMWREIV 380
V +M ++G P +G ++ ++
Sbjct: 652 ALDVFGRMKEEGMEPLLGNYKTLL 675
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 143/310 (46%), Gaps = 14/310 (4%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+ + P YT +++ L +A R D +++ ++ G +V+ MA
Sbjct: 555 KKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME-------KQGCEPSVVTYSSLMAS 607
Query: 143 RISKAIE----TLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+ E +LFD M C V T++LV+N L + + ++ + G+E
Sbjct: 608 FYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPL 667
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
LL L ++ ++ A + +E + + P+ Y+ +++GL + V+EA L++
Sbjct: 668 LGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVD 727
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M+++ I D T+ L+ GL K G++EE + +M +G P+ +Y ++ L
Sbjct: 728 SMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGG 787
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+ A + M +R P V+Y LI L + VE+ + + + +G P +G++
Sbjct: 788 KLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYS 847
Query: 378 EIVGCVTFGK 387
++ +FGK
Sbjct: 848 SLID--SFGK 855
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 117/250 (46%), Gaps = 2/250 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGR+ +A+ L +M C PSV T++ ++ E ++ + G D
Sbjct: 576 AGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVST 635
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
++++ LC++ +++ A V ++ EP + Y TL+ L + ++ A + ++
Sbjct: 636 YSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQ 695
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ DT +NI+++GL K +V+E KL++ MK + P+ +Y +L GL R
Sbjct: 696 ESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLE 755
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA + +M E P V+Y L+ L + + + M ++ VP + + ++
Sbjct: 756 EAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLI 815
Query: 381 GCVTFGKDNR 390
+ GK+ R
Sbjct: 816 D--SLGKEGR 823
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 110/230 (47%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A++ L M + C P+V T+ +++ L A E + K G E
Sbjct: 542 GHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTY 601
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L+ + E + + DE ++ C +V TYS +++ LC+ +V++A + RM+
Sbjct: 602 SSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKE 661
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EG++ + L+S L K K++ +++ ++ P++ Y ++ GL+ R E
Sbjct: 662 EGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDE 721
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A +LV M + + P +Y L+ GL +E+ + KM ++G P
Sbjct: 722 ACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEP 771
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 2/217 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ +I+ L + R + + + K C + G + ++I +G G + +A+
Sbjct: 806 PDVVTYSSLIDSLGKEGRVEEAYYFFEN-SISKGCTPNVGVYSSLIDSFGK-KGMVDRAL 863
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E +M C P++ T+N +L+ L A + + K+G D NIL+ G+
Sbjct: 864 ELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGV 923
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G ++ A ++ P+V T+++L+ L + + EA L + ME EG +
Sbjct: 924 GKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSV 983
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
VT+N+LI L + GKV E + MK KGC P+ +
Sbjct: 984 VTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGIT 1020
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 135/283 (47%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++IN L + R + ++ + + DG YN + G +A+
Sbjct: 271 PNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFA--PDGVTYNTLVNGYCKVGNFHQAL 328
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M P V T+ ++N + A + G+ + L+ G
Sbjct: 329 VLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGF 388
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G ++ A+ + DE + P + TY+ L++G C G +EEA GLL ME +G+ D
Sbjct: 389 SQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDV 448
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V+++ +I+G + +++ ++ M KG P++ +Y ++ GL +++R EA +L
Sbjct: 449 VSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQE 508
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + + P +Y LI+G C + + + + +M+++GF+P
Sbjct: 509 MLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLP 551
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 136/283 (48%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I + KR D +++ + +E L + YN++ GRI +
Sbjct: 236 PNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGL--EPNLLTYNMVINGLCRVGRIEETS 293
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +M P T+N ++N + + +++ + G+ D L+ +
Sbjct: 294 GVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTM 353
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ GNL A D+ + PN TY++L++G +KG ++EA+ + + M G
Sbjct: 354 CKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTI 413
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N L++G G++EE + LL M+GKG P+ SY ++ G + A ++
Sbjct: 414 VTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAE 473
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + +SP ++Y LI GLC Q+ + + + ++M+ + +P
Sbjct: 474 MVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLP 516
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 118/253 (46%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F YN++ AG + + +M C P+V T+N V+ K E + S
Sbjct: 204 FSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRS 263
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+E + N+++ GLC G +E VL E ++ P+ TY+TL++G C+ GN
Sbjct: 264 MGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGN 323
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+A L M G+ D VT+ LI+ + K G + M+ ++M +G PN +Y
Sbjct: 324 FHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTS 383
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G K EA + MI P+ V+Y L++G C +E+ +L+ M +G
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443
Query: 369 FVPRMGMWREIVG 381
P + + I+
Sbjct: 444 LSPDVVSYSTIIA 456
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 12/265 (4%)
Query: 122 LCRFSDGFFYNVIKI--YGNMAGRISKAIETLFDMPSYNCW-PSVKTFNLVLNLLVSAK- 177
+C S F V+K Y N I KA+ + D+ N + P V ++N +L+ +V +
Sbjct: 127 MCNSSSAVFDLVVKSCSYLNF---IEKAL-NIVDLAKLNGFMPGVLSYNAILDSIVRCRK 182
Query: 178 --LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
++ E +Y GV ++ NIL++G C GNLE +E + C PNV T
Sbjct: 183 PVIFAE--KVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVT 240
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y+T++ C+ ++EAF LL M EG++ + +T+N++I+GL + G++EE +L M
Sbjct: 241 YNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMD 300
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
KG P+ +Y ++ G F +A L M+ + P V+Y LI+ +C +
Sbjct: 301 RKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLN 360
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
+M +G P + ++
Sbjct: 361 RAMEFFDQMHVRGLRPNGVTYTSLI 385
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 135/307 (43%), Gaps = 33/307 (10%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-----FYNVIKIYGNMAGR 143
PN YT +IN +Q D I + GF YN + ++GR
Sbjct: 376 PNGVTYTSLINGFSQKGFMDEAYRIWDEM-------IRSGFPPTIVTYNALLNGHCVSGR 428
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACC 200
+ +AI L M P V +++ ++ Y E+ + A++ GV DA
Sbjct: 429 MEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCR---YQELDRAFQMNAEMVEKGVSPDAIT 485
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L++GLCE L A + E ++ P+ TY++L++G C++G++ EA L + M
Sbjct: 486 YSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMI 545
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL---------- 310
+G DTVT+N+LI+GL KQ + E +LL ++ PN +Y ++
Sbjct: 546 KKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKS 605
Query: 311 -----YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
G K EA ++ MI P+ Y +IHG C V + K+MV
Sbjct: 606 VVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMV 665
Query: 366 QQGFVPR 372
GF+P
Sbjct: 666 DFGFIPH 672
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 144/319 (45%), Gaps = 17/319 (5%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL+ R P+ YT +IN + +A + + ++ V L +G Y +
Sbjct: 329 VLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGL--RPNGVTYTSLIN 386
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ G + +A +M P++ T+N +LN + E G+ G+
Sbjct: 387 GFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSP 446
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D + ++ G C L+ AF + E ++ P+ TYS+L+ GLCE+ + EA L
Sbjct: 447 DVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLF 506
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ M ++ + D T+ LI+G K+G + E + L + M KG P++ +Y ++ GL +
Sbjct: 507 QEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQ 566
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIH---------------GLCNQKLVEDVDWVL 361
R EAK L+ ++ + P+ ++Y LI G C + L+ + D V
Sbjct: 567 ARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVF 626
Query: 362 KKMVQQGFVPRMGMWREIV 380
+ M+++ P ++ I+
Sbjct: 627 ESMIKRNQKPNEAVYNVII 645
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 106/248 (42%), Gaps = 18/248 (7%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
+N K +P+ Y+ +I L + +R + D+ Q + + L D F Y +
Sbjct: 470 MNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSL--LPDEFTYTSLING 527
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE-----IQGIYTSAAKL 192
G +++A+ +M P T+N+++N L E ++ Y +
Sbjct: 528 YCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPN 587
Query: 193 GVEIDA---CCLNI-------LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
G+ D C +I L+KG C G + A V + K+N +PN Y+ ++HG
Sbjct: 588 GITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHG 647
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
C GNV +A L + M G TVT L+ L +G ++E + L+ R + C +
Sbjct: 648 HCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG-MDEQLNLVIRDILRSCKLS 706
Query: 303 SASYQEVL 310
A + L
Sbjct: 707 DAELSKAL 714
>gi|357455193|ref|XP_003597877.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162918|gb|ABD28713.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355486925|gb|AES68128.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 439
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 179/397 (45%), Gaps = 19/397 (4%)
Query: 15 IIQSLSSASTI--------TRKRTFALASPSASHQDSD----HHAYKLNHKDWLSPTEVL 62
+I SL S T+ T +T + P+ SD A ++ +W+ L
Sbjct: 21 LITSLRSTRTLLKIFAPSSTAIKTLKPSKPALEVLKSDLEPSKPALEVLKSEWVPSKPAL 80
Query: 63 KIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL 122
+ + DP + + + N + +++LA AKRFD IE ++++ K
Sbjct: 81 EALKSEWDPHKLFHIFKSNATNPIVVENRFAFYDTVSRLAGAKRFDYIEQLLEQQKKLPQ 140
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
R +GF +I +YGN AG I A+ T + M + C +VK+FN LN+L ++ + EI
Sbjct: 141 SR-REGFVVRIITLYGN-AGMIQHALNTFYQMGDFRCVRTVKSFNATLNVLAKSRDFDEI 198
Query: 183 QGIYTSAAK-LGVEIDACCLNILLKGLCENGNL-EAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ + +D +NI +K CE L EA ++LD + +P+V TY+TL+
Sbjct: 199 SRFLNEVPRRFDIRLDVYSVNIAVKAFCEAEKLKEAYLFMLDCVNNKGVKPDVVTYTTLI 258
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
+ E GL +M +G+ + TFN+ I L +V + KL+ M+ G
Sbjct: 259 SAFYDHKRWEIGNGLWNQMVLKGVMPNLHTFNVRIQFLVTVRRVWDANKLMALMQRNGVT 318
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICER-MSPSFVSYKKLIHGLCNQKLVEDVDW 359
P+ + V+ G + +PE V + ++ S Y+ +IH LC +
Sbjct: 319 PDEVTLVLVIKGFF-RAGYPEMAMRVYSALHDKGYKISANIYQTMIHNLCKRGDFSQAYT 377
Query: 360 VLKKMVQQGFVPRMG-MWREIVGCVTFGKDNRNRVYV 395
+ K +++ + P + ++ + G GK N+ +V V
Sbjct: 378 LCKDSMRKNWFPNVDTIFMLLEGLKKSGKINKAKVIV 414
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 3/155 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P++ TFN+ + LV+ + + + + GV D L +++KG G E A V
Sbjct: 284 PNLHTFNVRIQFLVTVRRVWDANKLMALMQRNGVTPDEVTLVLVIKGFFRAGYPEMAMRV 343
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ + + Y T++H LC++G+ +A+ L + + + T +L+ GL+K
Sbjct: 344 YSALHDKGYKISANIYQTMIHNLCKRGDFSQAYTLCKDSMRKNWFPNVDTIFMLLEGLKK 403
Query: 281 QGKVEEG---MKLLERMKGKGCYPNSASYQEVLYG 312
GK+ + + L E K + AS Q +L G
Sbjct: 404 SGKINKAKVIVALAEGRKPPFSFSYLASMQSILSG 438
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 124/241 (51%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + K D+ Y P V++++++++ L A E I+ + + G +DA
Sbjct: 544 AGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARA 603
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ G C++G L+ A+ VL+E + P V TY +++ GL + ++EA+ L E +
Sbjct: 604 YNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK 663
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+GI+ + + ++ LI G K G+++E +LE M KG PN ++ ++ L+ +
Sbjct: 664 SKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEIN 723
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA M + SP+ +Y LI+GLC + ++M +QG VP + + ++
Sbjct: 724 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMI 783
Query: 381 G 381
Sbjct: 784 A 784
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 144/332 (43%), Gaps = 58/332 (17%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL--CRFSDGFFYNVIKIYGNM 140
K + P++ YT +I L +A R E++ +++ E+ C ++ YN + +
Sbjct: 279 KSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYA----YNTMIMGYGS 334
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG+ A + L + C PSV +FN +L L + E ++ A K E ++
Sbjct: 335 AGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKKDAEPNSST 393
Query: 201 LNILLKGLCENGNLEAAFYVLDE------FP----------------------------- 225
NI++ LC G +E A+ + DE FP
Sbjct: 394 YNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETAS 453
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
++ C PN TY +L+ GL +KGNV++A+ L E M G +A+ V + LI G+ E
Sbjct: 454 QRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKE 513
Query: 286 EGMKLLERMKGKGCYPNSA---SYQEVLYGLLDKKRFPEAKELVGRMICERMS-----PS 337
+G K+ + M +GC P+ +Y + ++ D ++ GR I E + P
Sbjct: 514 DGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEK--------GRAIFEDIKGYGFLPD 565
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
SY LIHGL + + M QQGF
Sbjct: 566 VRSYSILIHGLTKAGQARETSSIFHAMKQQGF 597
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 138/295 (46%), Gaps = 8/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA- 147
PN +++++L +AK+F+ ++ + ++ C + + ++I G G + A
Sbjct: 424 PNLLTVNIMVDRLCKAKKFEPAYEMFETAS-QRGCNPNSVTYCSLIDGLGK-KGNVDDAY 481
Query: 148 --IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
E + D +N P V T +L+ N + + + I+ + G + D LN +
Sbjct: 482 RLFENMLDT-GHNANPVVYT-SLIRNFFMHGR-KEDGHKIFKEMNRRGCQPDLTLLNTYM 538
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
+ + G++E + ++ P+VR+YS L+HGL + G E + M+ +G
Sbjct: 539 DCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFA 598
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D +N ++ G K GK+++ ++LE MK K P A+Y ++ GL R EA L
Sbjct: 599 LDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYML 658
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + + Y LI G +++ +L++M+++G P + W ++
Sbjct: 659 FEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 713
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 104/226 (46%), Gaps = 14/226 (6%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-- 140
K K P A Y II+ LA+ R D + + K S G NVI +Y ++
Sbjct: 628 KVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK-------SKGIELNVI-VYSSLID 679
Query: 141 ----AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
GRI +A L +M P+V T+N +++ LV A+ E + S ++
Sbjct: 680 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSP 739
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ +IL+ GLC AF E KQ PNV TY+T++ GL + GN+ +A L
Sbjct: 740 NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLF 799
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
ER ++ G D +FN LI G+ + E + E + KGC N
Sbjct: 800 ERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRIN 845
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 120/260 (46%), Gaps = 2/260 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++I+ L +A + I +K + D YN + +G++ KA
Sbjct: 564 PDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFAL--DARAYNAVVDGFCKSGKLDKAY 621
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M P+V T+ +++ L E ++ A G+E++ + L+ G
Sbjct: 622 EVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGF 681
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G ++ A+ +L+E K+ PNV T+++LM L + + EA + M+ +T
Sbjct: 682 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNT 741
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T++ILI+GL + K + + M+ +G PN +Y ++ GL +A L R
Sbjct: 742 YTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFER 801
Query: 329 MICERMSPSFVSYKKLIHGL 348
+P S+ LI G+
Sbjct: 802 FKANGGTPDAASFNALIEGM 821
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 156/367 (42%), Gaps = 32/367 (8%)
Query: 15 IIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISV 74
+I L + + F LAS +AS AY VL S+ D ++
Sbjct: 84 VIPVLRTLRNPSLAAPFFLASSAASPHPLPADAY----------NAVLPFLSH--DLAAM 131
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-FYNV 133
VL + S PN A L+ + L + +R D E + I + +F F Y V
Sbjct: 132 EKVLEEMSVLGYGVPNPACADLV-SALVRTRRLDDAERV---IAAMRRLKFRPAFSAYTV 187
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ A + +A+E L M V F ++ L G ++G A L
Sbjct: 188 LIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALARE---GRVEG----ALALV 240
Query: 194 VEIDACCL--NILLKGLC-----ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
E+ CL +I+L +C + GN++ A+ E Q +P+ +Y++++ LC+
Sbjct: 241 DEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKA 300
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G + EA L +ME+E +N +I G G+ E KLL+++K +GC P+ S+
Sbjct: 301 GRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSF 360
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+L L K++ EA L M + P+ +Y +I LC VE+ + +M
Sbjct: 361 NSILTCLGKKRKVDEALTLFEAMK-KDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEH 419
Query: 367 QGFVPRM 373
G P +
Sbjct: 420 AGLFPNL 426
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+L+ + E E A +L + + E V ++TL+ L +G VE A L++ ++
Sbjct: 186 TVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKG 245
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
++ D V +N+ I K G V+ K +K +G P+ SY +++ L R E
Sbjct: 246 SCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSE 305
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A+EL G+M ER P +Y +I G + E+ +L ++ ++G +P + + I+
Sbjct: 306 AEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILT 365
Query: 382 CV 383
C+
Sbjct: 366 CL 367
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 148/337 (43%), Gaps = 40/337 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + I+ L + ++ D + + +K + S YN+I MAG++ +A
Sbjct: 355 PSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSST---YNIIIDMLCMAGKVEEAY 411
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M +P++ T N++++ L AK + ++ +A++ G ++ L+ GL
Sbjct: 412 MIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGL 471
Query: 209 CENGNLEAAFYVLD-----------------------------------EFPKQNCEPNV 233
+ GN++ A+ + + E ++ C+P++
Sbjct: 472 GKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDL 531
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+T M + + G+VE+ + E ++ G D +++ILI GL K G+ E +
Sbjct: 532 TLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHA 591
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
MK +G ++ +Y V+ G + +A E++ M +R+ P+ +Y +I GL
Sbjct: 592 MKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDR 651
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
+++ + ++ +G + ++ ++ FGK R
Sbjct: 652 LDEAYMLFEEAKSKGIELNVIVYSSLID--GFGKVGR 686
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 8/285 (2%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGRISKAIET 150
A + I++ L ++KR + ++ + ++ RFS D YNVI + R KA+E
Sbjct: 162 ASFNTILDVLCKSKRVEKAYELFRALR----GRFSVDTVTYNVILNGWCLIKRTPKALEV 217
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
L +M P++ T+N +L A + K EID ++ G
Sbjct: 218 LKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGV 277
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G ++ A V DE ++ P+V TY+ ++ LC+K NVE A + E M G + + T
Sbjct: 278 AGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTT 337
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+N+LI GL G+ G +L++RM+ +GC PN +Y ++ + +A L +M
Sbjct: 338 YNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMG 397
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDV---DWVLKKMVQQGFVPR 372
P+ +Y LI G+ +K ED+ +L +MV++GF+PR
Sbjct: 398 SGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPR 442
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 7/261 (2%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
R P + VL + +R NPN Y ++ +A + + +K ++ C
Sbjct: 210 RTP-KALEVLKEMVER-GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMK-KRDCEIDVV 266
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+ V+ +G +AG I +A +M PSV T+N ++ +L ++
Sbjct: 267 TYTTVVHGFG-VAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEE 325
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ G E + N+L++GL G ++ + CEPN +TY+ ++ E
Sbjct: 326 MVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSE 385
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM---KLLERMKGKGCYPNSAS 305
VE+A GL E+M S + T+NILISG+ + + E+ + KLL M +G P +
Sbjct: 386 VEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFT 445
Query: 306 YQEVLYGLLDKKRFPEAKELV 326
+ VL GLL AKE++
Sbjct: 446 FNRVLNGLLLTGNQAFAKEIL 466
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ L+ RM S I TF I+ GK ++ +KL M GC+ + AS+ +L
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L KR +A EL R + R S V+Y +++G C K VLK+MV++G P
Sbjct: 171 LCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPN 229
Query: 373 MGMWREIV 380
+ + ++
Sbjct: 230 LTTYNTML 237
>gi|449434360|ref|XP_004134964.1| PREDICTED: uncharacterized protein LOC101207147 [Cucumis sativus]
Length = 2802
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 161/336 (47%), Gaps = 16/336 (4%)
Query: 36 PSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYT 95
PS++ Q K N +P + N+ D + N S+R + + Y
Sbjct: 1269 PSSATQ-------KCNKSTAATPLTAEEHLQNIVDKF----IKNTESQR--FRHQKGTYD 1315
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
+ LA K+F IEDI++ K + + +GF +IK+YG AG S A + ++P
Sbjct: 1316 STVRLLAVRKKFSLIEDIIEAQKKYEDIKV-EGFATRLIKLYGK-AGMFSHARKLFDELP 1373
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACCLNILLKGLCENGNL 214
NC +VK+FN +L V +K +++ I+ + + ++ D NI++ CE L
Sbjct: 1374 ELNCERTVKSFNSLLASCVKSKELDQVEKIFREVPQEVSIKADVISYNIVINAFCEMDAL 1433
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A + K EPN+ T++TL+ L KG + + ME++ I D V++N
Sbjct: 1434 DKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNIAPDLVSYNAR 1493
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
+ G+ + ++++G++LL +M+ K P+ SY ++ G EAK+ ++ +
Sbjct: 1494 LRGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEEAKKWYYKLKESEV 1553
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
P +Y+ L+ LC Q + + K+ + +GFV
Sbjct: 1554 DPIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFV 1589
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 143/290 (49%), Gaps = 3/290 (1%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
S+ K + Y + LA K+F IE+I++ K + +GF +I++YG A
Sbjct: 922 SESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIK-EEGFVIRLIRLYGK-A 979
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACC 200
G S+A + ++P C +V++FN +L V +K + +++ I+ + L +E D
Sbjct: 980 GMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSS 1039
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI++ CE + + A + K EP++ T++TL+ L KG + + RME
Sbjct: 1040 YNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWARME 1099
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++ I D V++N + G+ ++++G++LL +M+ K P+ Y ++
Sbjct: 1100 NKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLE 1159
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
EAK+ ++ + P+ +Y+ L+ LC + + + K+ + + FV
Sbjct: 1160 EAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCKEAINKRFV 1209
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 135/277 (48%), Gaps = 21/277 (7%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y + LA K+F IEDI++ K + + +GF +IK+YG AG S A + +
Sbjct: 1713 YFSTVRLLAIHKKFSMIEDIIEAQKKYEEIK-EEGFAIRLIKLYGK-AGMFSHARKLFDE 1770
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA-------------------KLGV 194
+P NC +VK+FN +L ++K + +++ ++ ++ +
Sbjct: 1771 LPELNCERTVKSFNALLTSCANSKEFEQLETMFREVPCANSKEFDQLETIFREVPQEVSI 1830
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E D NI++ C+ G L+ A ++ K EPN+ T++TL+ L KG +
Sbjct: 1831 EADVVSYNIVINAYCKMGALDKAILFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDGES 1890
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ RME++ I D +++N + + + ++++G++LL M+ K PN SY ++ G
Sbjct: 1891 MWARMENKNIAPDLISYNARLQRMVLEKRIQDGIQLLAEMEEKAIKPNVDSYYILIEGFC 1950
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ +AK+ ++ ++P+ Y+ L+ C +
Sbjct: 1951 EDGDLEQAKQWYYKLKDNEVNPNASIYRTLLPLYCEK 1987
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 64 IFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC 123
+FS+ R + LN K +N ++ ++K D +E I + + E
Sbjct: 1361 MFSHARKLFDELPELNCERTVKSFNS-------LLASCVKSKELDQVEKIFREVPQEVSI 1413
Query: 124 RFSDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
+ +D YN VI + M + KAI DM P++ TFN +L L + +
Sbjct: 1414 K-ADVISYNIVINAFCEMDA-LDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDG 1471
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ ++ + + D N L+G+ ++ +L + ++ +P+V +Y+ L+ G
Sbjct: 1472 ERVWATMENKNIAPDLVSYNARLRGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKG 1531
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
C+ G++EEA +++ +D T+ IL+ L +QG + G++L + KG +
Sbjct: 1532 FCQDGDLEEAKKWYYKLKESEVDPIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFH 1591
Query: 303 SASYQEVLYGLLDKKRFPEAKEL 325
+A Q V+ GL + + EAK+L
Sbjct: 1592 TAEVQRVVDGLAEVSKTEEAKDL 1614
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 116/253 (45%), Gaps = 5/253 (1%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VI 134
++L + K++ E ++ + A +K FD +E I + + E +D YN VI
Sbjct: 1785 ALLTSCANSKEFEQLETMFREV--PCANSKEFDQLETIFREVPQEVSIE-ADVVSYNIVI 1841
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
Y M G + KAI DM P++ TFN +L L S + + + ++ +
Sbjct: 1842 NAYCKM-GALDKAILFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDGESMWARMENKNI 1900
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D N L+ + ++ +L E ++ +PNV +Y L+ G CE G++E+A
Sbjct: 1901 APDLISYNARLQRMVLEKRIQDGIQLLAEMEEKAIKPNVDSYYILIEGFCEDGDLEQAKQ 1960
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+++ ++ + + L+ ++G + G++L + G + Q V+ GL+
Sbjct: 1961 WYYKLKDNEVNPNASIYRTLLPLYCEKGDFDSGLRLCKESFDNGLVFLAEEVQRVVDGLI 2020
Query: 315 DKKRFPEAKELVG 327
+ + EAK+LV
Sbjct: 2021 EVSKIEEAKDLVA 2033
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 101/209 (48%), Gaps = 3/209 (1%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKL-GVEIDACCLNILLKGLCENGNLEAAFYVLDE 223
T++ + LL K + I+ I + K ++++ L+K + G A + DE
Sbjct: 1313 TYDSTVRLLAVRKKFSLIEDIIEAQKKYEDIKVEGFATR-LIKLYGKAGMFSHARKLFDE 1371
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE-GIDADTVTFNILISGLRKQG 282
P+ NCE V+++++L+ + +++ + + E I AD +++NI+I+ +
Sbjct: 1372 LPELNCERTVKSFNSLLASCVKSKELDQVEKIFREVPQEVSIKADVISYNIVINAFCEMD 1431
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+++ + M+ G PN ++ +L L K +F + + + M + ++P VSY
Sbjct: 1432 ALDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNIAPDLVSYN 1491
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ G+ +K ++D +L KM ++ P
Sbjct: 1492 ARLRGMVLEKRIQDGIELLAKMEEKEIKP 1520
>gi|297599210|ref|NP_001046823.2| Os02g0468500 [Oryza sativa Japonica Group]
gi|47497324|dbj|BAD19365.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|125582052|gb|EAZ22983.1| hypothetical protein OsJ_06677 [Oryza sativa Japonica Group]
gi|255670892|dbj|BAF08737.2| Os02g0468500 [Oryza sativa Japonica Group]
Length = 506
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 144/327 (44%), Gaps = 16/327 (4%)
Query: 58 PTEVLKIFSNLRDPISVISVLNQYSKRKDY--NPNEALYTLIINKLAQAKRFDAIEDIMQ 115
P + ++ ++LRDP R Y PN +Y ++I + +
Sbjct: 169 PDVLTELLADLRDP------------RSKYLPQPNTCIYNILIKHYVKKGDLGTAFQVFD 216
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAG-RISKAIETLFDMPSYN-CWPSVKTFNLVLNLL 173
++ I G G ++ +A E DM + P T+NL++
Sbjct: 217 EMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTYNLLIGGF 276
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ Q I+ K E +A L+ G C+ G +EAA V +E + +P+
Sbjct: 277 CRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRSGVQPDA 336
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+Y++L+ LC GNV+E L++ M +G AD VT+N+L+ GL K ++ E + LLE+
Sbjct: 337 VSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEK 396
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+ +G N ASY+ V+ L +A L+G M+ P + + L+ GLC+
Sbjct: 397 LPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGR 456
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
V D L +V GF+P W ++
Sbjct: 457 VSDATVTLYGLVDTGFMPEARCWARLI 483
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 137/287 (47%), Gaps = 9/287 (3%)
Query: 86 DYNPNEALYTLIINKL---AQAKR-FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
D P+ Y+ +I L AQ K F+ ED++++ ++ D YN++
Sbjct: 225 DVRPSLVTYSTLIGGLCRGAQMKEAFELFEDMIEKDRI-----VPDQLTYNLLIGGFCRL 279
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA M C P+ + ++N +G++ + GV+ DA
Sbjct: 280 GQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRSGVQPDAVSY 339
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ LC +GN++ ++ E ++ C+ +V TY+ L+ GLC+ + EA LLE++ S
Sbjct: 340 TSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLPS 399
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EG+ + ++ I+++ L G++E+ LL M G+G P+ A+ +L GL D R +
Sbjct: 400 EGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVSD 459
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A + ++ P + +LI + ++ + +L ++ +G
Sbjct: 460 ATVTLYGLVDTGFMPEARCWARLIESVFRERKLRRSIELLDVLIAEG 506
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 130/292 (44%), Gaps = 37/292 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +Y II+ + + K + D+ KV K F D F YN + + G++ AI
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSE-KVSKRI-FPDVFTYNALISGFCIVGKLKDAI 388
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M S N P V TF+ IL+ G
Sbjct: 389 DLFNKMTSKNIIPDVYTFS-----------------------------------ILVDGF 413
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++GN++ A VL KQ+ +P+V TYS+LM G C V +A + M G+ A+
Sbjct: 414 CKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANV 473
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++NI+I+G K V+E MKL + M K +P+ +Y ++ GL R A ELV
Sbjct: 474 QSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDE 533
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M P ++Y ++ LC + V+ +L K+ QG P M + +V
Sbjct: 534 MHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILV 585
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 126/232 (54%), Gaps = 2/232 (0%)
Query: 140 MAGRISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
+ ++KA E++F+ S+ +V+++N+++N K+ E ++ + D
Sbjct: 450 LVNEVNKA-ESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+ L+ GLC++G + A ++DE + +P++ TY++++ LC+K +V++A LL +
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTK 568
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
++ +GI D T+ IL+ GL + GK+E+ K+ E + KG + +Y ++ G DK
Sbjct: 569 LKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGL 628
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
F EA L+ +M P +Y+ +I L + + + +L++M+ +G +
Sbjct: 629 FDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%)
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
+G +D L+ GLC+ G +AA +L + +P+V Y+T++ G+C+ +V +
Sbjct: 292 MGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVND 351
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
AF L S+ I D T+N LISG GK+++ + L +M K P+ ++ ++
Sbjct: 352 AFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVD 411
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
G EAK ++ M+ + + P V+Y L+ G C V + + M +G
Sbjct: 412 GFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRG 468
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 2/193 (1%)
Query: 181 EIQGIYTSAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
EI YT L G E D L +KG C G + A + D+ + +Y T
Sbjct: 244 EISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGT 303
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L++GLC+ G + A LL R + + + D V +N +I G+ K V + L K
Sbjct: 304 LINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKR 363
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
+P+ +Y ++ G + +A +L +M + + P ++ L+ G C +++
Sbjct: 364 IFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAK 423
Query: 359 WVLKKMVQQGFVP 371
VL M++Q P
Sbjct: 424 NVLAMMMKQSIKP 436
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 36/163 (22%)
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
K EP+ T +T + G C KG + +A +++ + G D V++ LI+GL K G+ +
Sbjct: 256 KNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETK 315
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
++LL R GK + P V Y +I
Sbjct: 316 AALELLRRNDGK-----------------------------------LVQPDVVMYNTII 340
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
G+C K V D + + V + P + + ++ G GK
Sbjct: 341 DGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGK 383
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 131/300 (43%), Gaps = 12/300 (4%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAI-----EDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
D P+ Y+ +IN + D E + QRI + YN I
Sbjct: 83 DCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVT-------YNSIIAALCK 135
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A + KA+E L M P T+N +++ S+ E GVE D
Sbjct: 136 AQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVT 195
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ LC+NG A + D K+ +P + TY TL+ G KG + E GLL+ M
Sbjct: 196 YNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 255
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI + F+IL+ KQ KVEE M + +M+ +G PN+ +Y V+ L R
Sbjct: 256 RNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 315
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A +MI E +SP + Y LIHGLC E + ++ +M+ +G + I+
Sbjct: 316 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 375
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 147/327 (44%), Gaps = 19/327 (5%)
Query: 70 DPISVISVLNQYSKRKD-------YN--------PNEALYTLIINKLAQAKRFD-AIEDI 113
D +S +V+N + K D YN PN Y II L +A+ D A+E +
Sbjct: 87 DVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVL 146
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+K + D YN I +G+ +AI L M S P V T+N +++ L
Sbjct: 147 TTMVKSGVM---PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 203
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
E + I+ S K G++ + LL+G G L +LD + PN
Sbjct: 204 CKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 263
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+S L+ ++ VEEA + +M +G++ + VT+ +I L K G+VE+ M E+
Sbjct: 264 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 323
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M +G P + Y +++GL ++ A+EL+ M+ + + + + +I C +
Sbjct: 324 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 383
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
V + + + MV+ G P + + ++
Sbjct: 384 VIESEKLFDLMVRIGVKPDIITYSTLI 410
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 126/273 (46%), Gaps = 2/273 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +PN ++++++ A+ ++ + + +++ + L + Y + +GR
Sbjct: 256 RNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL--NPNAVTYGAVIGILCKSGR 313
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ M P +N +++ L + + + + G+ ++ N
Sbjct: 314 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 373
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C+ G + + + D + +P++ TYSTL+ G C G ++EA LL M S G
Sbjct: 374 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 433
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D VT++ LI+G K ++++ + L M+ G P+ +Y +L GL +R AK
Sbjct: 434 MKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 493
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
EL + +Y ++HGLC KL +D
Sbjct: 494 ELYVGITKSGRQLELSTYNIILHGLCKNKLTDD 526
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQ--NCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D NILL GLC+ + A +L +C P+V +YST+++G ++G++++ +
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYS 109
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
M + I + VT+N +I+ L K V++ M++L M G P+ +Y +++G
Sbjct: 110 TYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 169
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ EA + +M + + P V+Y L+ LC + + M ++G P +
Sbjct: 170 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEIT 229
Query: 375 MW 376
+
Sbjct: 230 TY 231
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+++ + G+ +A ++ LC++G +E A ++ + P Y++L+HGLC
Sbjct: 285 VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 344
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
E A L+ M GI +T+ FN +I K+G+V E KL + M G P+
Sbjct: 345 TCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 404
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ G + EA +L+ M+ M P V+Y LI+G C ++D + ++M
Sbjct: 405 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREM 464
Query: 365 VQQGFVP 371
G P
Sbjct: 465 ESSGVSP 471
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 3/168 (1%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA--DTVTFN 272
E A +V DE ++ P+V +Y+ L++GLC++ +EA LL M +G D D V+++
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
+I+G K+G +++ M + PN +Y ++ L + +A E++ M+
Sbjct: 93 TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P ++Y ++HG C+ ++ LKKM G P + + ++
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLM 200
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 129/294 (43%), Gaps = 4/294 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P +Y +I+ L +++ E+++ + +C + F+N I GR+ ++
Sbjct: 330 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL--NTIFFNSIIDSHCKEGRVIES 387
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E LFD M P + T++ +++ A E + S +G++ D + L+
Sbjct: 388 -EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLIN 446
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+ ++ A + E P++ TY+ ++ GL + A L + G
Sbjct: 447 GYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQL 506
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T+NI++ GL K ++ +++ + + + ++ ++ LL R EAK+L
Sbjct: 507 ELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 566
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P++ +Y+ + + Q L+E++D + M G GM IV
Sbjct: 567 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 620
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A+ +M S P + T+N++L L + + +Y K G +++ N
Sbjct: 453 RMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYN 512
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I+L GLC+N + A + + + RT++ ++ L + G +EA L S
Sbjct: 513 IILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 572
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + T+ ++ + QG +EE +L M+ GC +S ++ LL + A
Sbjct: 573 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 632
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 144/310 (46%), Gaps = 15/310 (4%)
Query: 88 NPNEALYTLIINKLAQAKR-FDAI----EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
P+ YT +I+ L + KR F+A E ++ + ++ +C Y + G
Sbjct: 53 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVC-------YTALIRELLQTG 105
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+I +A M S+ C P V T + +++ L A G I+ S G+ + +
Sbjct: 106 KIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYS 165
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC+ ++ A +L + K C P+ TY+ L+ GLC+ G+VE A + M
Sbjct: 166 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEA 225
Query: 263 GIDADTVTFNILISGLRKQGKVEEGM-KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D T+NILISG K G + L + GC + +Y ++ L K+ E
Sbjct: 226 GCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEE 285
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A L+ ++ +P+ +Y L++GLC +E+ +L+K+V G P + + ++
Sbjct: 286 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 345
Query: 382 CVTFGKDNRN 391
GK+ R+
Sbjct: 346 --GLGKEKRS 353
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 140/298 (46%), Gaps = 13/298 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PNE +Y+ +I+ L +A++ D +++ ++K + C D YNV+ I G +A
Sbjct: 159 PNEVVYSALIHGLCKARKMDCALEMLAQMK-KAFCT-PDTITYNVL-IDGLCKSGDVEAA 215
Query: 149 ETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI---- 203
FD M C P V T+N++++ A G S A+ I+ C ++I
Sbjct: 216 RAFFDEMLEAGCKPDVYTYNILISGFCKA---GNTDAASHSLAQ-ETTINGCTIDIHTYT 271
Query: 204 -LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++ L +N +E A ++++ C P + TY+ L++GLC+ G +EEA LL ++
Sbjct: 272 AIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 331
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D VT+ LI GL K+ + E KL + M +G ++ Y ++ LL + P+A
Sbjct: 332 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQA 391
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ M P V+ +I GL + + K M +G P ++ ++
Sbjct: 392 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 449
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 129/310 (41%), Gaps = 37/310 (11%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
YT I++ LA+ K+ + +M++I C + + ++ M GR+ +AI+ L
Sbjct: 270 YTAIVDWLAKNKKIEEAVALMEKITANG-CTPTIATYNALLNGLCKM-GRLEEAIDLLRK 327
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+ C P V T+ +++ L K E ++ A G+ +D C L++ L + G
Sbjct: 328 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGK 387
Query: 214 LEAAFYVLDEFPKQNCEPNVRT-----------------------------------YST 238
+ A V C P+V T YS
Sbjct: 388 IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSA 447
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+HGLC+ ++ A +L +M+ DT+T+NILI GL K G VE + M G
Sbjct: 448 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 507
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C P+ +Y ++ G A + M R S + V+Y LI GLC ++ +
Sbjct: 508 CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKAS 567
Query: 359 WVLKKMVQQG 368
+ M ++G
Sbjct: 568 LYFQHMKERG 577
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 12/240 (5%)
Query: 88 NPNEALYTLIINKLAQAKR-FDAI----EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
P+ YT +I+ L + KR F+A E ++ + ++ +C Y + G
Sbjct: 334 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVC-------YTALIRELLQTG 386
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+I +A M S+ C P V T + +++ L A G I+ S G+ + +
Sbjct: 387 KIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYS 446
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC+ ++ A +L + K C P+ TY+ L+ GLC+ G+VE A + M
Sbjct: 447 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 506
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D T+NILISG K G + + + M C N +Y ++ GL +++ +A
Sbjct: 507 GCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKA 566
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ +AI+ L + C P V T+ +++ L K E ++ A G+ +D C
Sbjct: 35 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCY 94
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L++ L + G + A V C P+V T ST++ GL + G + A + + ME+
Sbjct: 95 TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 154
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ + V ++ LI GL K K++ +++L +MK C P++ +Y ++ GL
Sbjct: 155 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEA 214
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC 349
A+ M+ P +Y LI G C
Sbjct: 215 ARAFFDEMLEAGCKPDVYTYNILISGFC 242
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 118/283 (41%), Gaps = 36/283 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++I+ +A DA + + C D Y I + +I +A+
Sbjct: 229 PDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTI-DIHTYTAIVDWLAKNKKIEEAV 287
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + + C P++ T+N +LN GL
Sbjct: 288 ALMEKITANGCTPTIATYNALLN-----------------------------------GL 312
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G LE A +L + C P+V TY++L+ GL ++ EA+ L + M G+ DT
Sbjct: 313 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDT 372
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V + LI L + GK+ + + + M GC P+ + ++ GL R A +
Sbjct: 373 VCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKS 432
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M ++P+ V Y LIHGLC + ++ +L +M + P
Sbjct: 433 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 475
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL GLC+ G LE A +L + C P+V TY++L+ GL ++ EA+ L + M
Sbjct: 25 NALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL 84
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ DTV + LI L + GK+ + + + M GC P+ + ++ GL R
Sbjct: 85 RGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGA 144
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A + M ++P+ V Y LIHGLC + ++ +L +M + P
Sbjct: 145 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 194
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+I +A+ + + + C P++ T+N +LN L E + G D
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GL + A+ + E + + Y+ L+ L + G + +A + + M S
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D VT + +I GL K G++ +++ + M+ +G PN Y +++GL ++ A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E++ +M +P ++Y LI GLC VE +M++ G P
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKP 229
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+E A ++++ C P + TY+ L++GLC+ G +EEA LL ++ G D VT+
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI GL K+ + E KL + M +G ++ Y ++ LL + P+A + M
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P V+ +I GL + + K M +G P ++ ++
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 168
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 2/286 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ +++ L +A R ++ + +K D YNV+ G++ +A+E L D
Sbjct: 120 YSYLMDALGKAGRAAKALEVFSNM--QKAGCMPDTVVYNVLISCLGKQGKVDEALELLED 177
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P +T+N+V+++L S Y + + + D N LL GL +
Sbjct: 178 MNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRR 237
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A + DE C P++ T+ TL+ L + G +E+A R+ G ++ +N
Sbjct: 238 TDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNA 297
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LISG + G+V++G +L + M C+P+S +Y ++ G + A EL+ M+ E
Sbjct: 298 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 357
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+P+ +Y LI L VED + K+M+ +GF P M + +
Sbjct: 358 HTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
+C P+ +F+ ++ L + ++ G++ D N L+ C G L A
Sbjct: 42 SCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQA 101
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+L +V TYS LM L + G +A + M+ G DTV +N+LIS
Sbjct: 102 RRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISC 161
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L KQGKV+E ++LLE M KG P+ +Y V+ L R+ +A G M + SP
Sbjct: 162 LGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPD 221
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+Y L++GL + ++ + +M +P + + ++
Sbjct: 222 VVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLI 264
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 123/295 (41%), Gaps = 1/295 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D P+ Y +I +A D D+ +R+K E C+ + ++ + I+ R +
Sbjct: 6 DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCK-PNAVSFDTLVIFLCKMSRAT 64
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A+ +M V N +++ + + + + +D + L+
Sbjct: 65 DALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLM 124
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
L + G A V K C P+ Y+ L+ L ++G V+EA LLE M +GI
Sbjct: 125 DALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIM 184
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D T+NI+I L G+ E+ MK + P+ +Y +L GL +R EA +L
Sbjct: 185 PDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL 244
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + P ++ LI L +ED ++V+ G VP ++ ++
Sbjct: 245 FDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALI 299
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 106/230 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A L M ++ V T++ +++ L A + ++++ K G D
Sbjct: 96 GMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVY 155
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+L+ L + G ++ A +L++ ++ P+ RTY+ ++ L G E+A+ M+
Sbjct: 156 NVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKR 215
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
D VT+N L++GL+K + +E L + M+ C P+ ++ ++ L R +
Sbjct: 216 RKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMED 275
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A E R++ P+ Y LI G C V+ + + M++ P
Sbjct: 276 ALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFP 325
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 29/274 (10%)
Query: 60 EVLKIFSNLRD----PISV-----ISVLNQYSK------------RKDYNPNEALYTLII 98
+ L++FSN++ P +V IS L + K RK P+ Y ++I
Sbjct: 135 KALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVI 194
Query: 99 NKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYN 158
+ L+ R++ +K K D YN + R +A + +M +
Sbjct: 195 DVLSSCGRYEKAYSFFGMMKRRK--HSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 252
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA---KLGVEIDACCLNILLKGLCENGNLE 215
C P + TF +++ L A G ++ +A K+G ++ N L+ G C +G ++
Sbjct: 253 CMPDLTTFGTLIDTLAKA---GRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVD 309
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
+ + + + +C P+ TY+ L+ G +G+ A LL+ M EG T+N+LI
Sbjct: 310 KGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLI 369
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
L G+VE+ L + M KG P+ +Y +
Sbjct: 370 RSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
>gi|296090624|emb|CBI41008.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 154/328 (46%), Gaps = 18/328 (5%)
Query: 39 SHQDSDH---HAYKLNHKDWLSPTEVLKIFSNL----------RDPISVISVLNQYSKRK 85
S+++ DH + N +SP+ + NL R+ ++ + S+
Sbjct: 2 SNKEMDHNMIYGQDYNFGSLVSPSATAQATGNLESVFKDIYRERNLKRLVQKFKKSSELD 61
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQ-RIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ +Y + +LA AKRF IE+I++ + K + + R +GF +I +YG +G
Sbjct: 62 RFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISR--EGFAVRLISLYGK-SGMF 118
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS-AAKLGVEIDACCLNI 203
A + +MP C SV +FN +L V +K + +I G + LGV D NI
Sbjct: 119 DHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKIDGFFQELPGNLGVVPDVVSYNI 178
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ CE G+L++A VLDE K EP++ T++TL++ + G+ + + + M+
Sbjct: 179 IVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNN 238
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + ++N + G+ + ++ E ++L++ MK G P+ + ++ G + EAK
Sbjct: 239 VAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAK 298
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ + P +Y LI L +
Sbjct: 299 RWYSEIARNELPPVRATYMTLIPFLVEK 326
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 149/295 (50%), Gaps = 8/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P +Y +IN Q + I +++K + D YN + ++KA
Sbjct: 367 PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI--RPDHITYNALINGLCKLEMVTKAE 424
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILL 205
+ + +M PSV+TFN +++ +A G+++ +T + + G++ D ++
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTA---GQLEKCFTVLSDMQQKGIKSDVISFGSVV 481
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
K C+NG + A +LD+ ++ PN + Y++++ E G+ E+AF L+E+M++ G+
Sbjct: 482 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS 541
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
A VT+N+L+ GL + +++E +L+ ++ +G P+ SY ++ +K +A EL
Sbjct: 542 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 601
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ M + P+ +Y L+ L + V D++ + ++M+ + P ++ +V
Sbjct: 602 LQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 656
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 146/346 (42%), Gaps = 54/346 (15%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++++ L +A R D +M + + F DGF Y+++ G S+ +
Sbjct: 262 PNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSM--FPDGFTYSILFDGLTRTGE-SRTM 318
Query: 149 ETLFD--------MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+LF + +Y C +++LN L + + + G+
Sbjct: 319 LSLFAESLKKGVMLGAYTC-------SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 371
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE--------------- 245
N L+ G C+ +L AF + ++ ++ P+ TY+ L++GLC+
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 246 --------------------KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
G +E+ F +L M+ +GI +D ++F ++ K GK+
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
E + +L+ M K PN+ Y ++ ++ +A LV +M +S S V+Y L+
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 551
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNR 390
GLC +++ + ++ + QG P + + I+ C G ++
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDK 597
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 131/295 (44%), Gaps = 6/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + ++ A D +++R+ + D F YNV+ +G+ S A+
Sbjct: 155 PDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDAL 214
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILL 205
+ +M P+ T+N +++ V G+++ + ++ G + + N+LL
Sbjct: 215 KVFDEMVDMGVVPNWITYNTMIDGHVKG---GDLEAGFRLRDQMLHDGPKPNIVTYNVLL 271
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC G ++ ++DE + P+ TYS L GL G L +G+
Sbjct: 272 SGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVM 331
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
T +IL++GL K GKV + ++LE + G P + Y ++ G + A +
Sbjct: 332 LGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+M + P ++Y LI+GLC ++V + ++ +M + G P + + ++
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 136/320 (42%), Gaps = 8/320 (2%)
Query: 56 LSPTEVL-----KIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
L PT V+ + +RD + Q K + P+ Y +IN L + +
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQM-KSRHIRPDHITYNALINGLCKLEMVTKA 423
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
ED++ ++ + S F +I YG AG++ K L DM V +F V+
Sbjct: 424 EDLVMEMEKSGV-DPSVETFNTLIDAYGT-AGQLEKCFTVLSDMQQKGIKSDVISFGSVV 481
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
E I V +A N ++ E+G+ E AF ++++
Sbjct: 482 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS 541
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
++ TY+ L+ GLC ++EA L+ + ++G+ D V++N +IS +G ++ ++L
Sbjct: 542 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 601
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L+ M G P +Y ++ L R + + L +M+ + + PS Y ++
Sbjct: 602 LQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 661
Query: 351 QKLVEDVDWVLKKMVQQGFV 370
+ V + K+M ++G
Sbjct: 662 CENDSKVASLKKEMSEKGIA 681
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 8/209 (3%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
DA N+++ GL +G A V DE PN TY+T++ G + G++E F L
Sbjct: 193 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 252
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
++M +G + VT+N+L+SGL + G+++E L++ M +P+ +Y + GL
Sbjct: 253 DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL--- 309
Query: 317 KRFPEAKELVGRMICERMSPSFV----SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
R E++ ++ + E + + + L++GLC V + VL+ +V G VP
Sbjct: 310 TRTGESRTMLS-LFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 368
Query: 373 MGMWREIVGCVTFGKDNRNRVYVTETVDS 401
++ ++ +D R + E + S
Sbjct: 369 TVIYNTLINGYCQVRDLRGAFCIFEQMKS 397
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 147/324 (45%), Gaps = 37/324 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + P+ Y I+ + + + + +++++K E R + + +I Y N G
Sbjct: 253 KCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMK-EIGLRPTAVTYNTLIDGYCN-KG 310
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A + M P+V T+N++++ L E GI ++ G+ D+ N
Sbjct: 311 NLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYN 370
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH--------------------- 241
IL+ G C GN++ AF + DE + +P TY++L++
Sbjct: 371 ILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRK 430
Query: 242 --------------GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
G C GN++ AF +L+ M+ + D VTFN L+ G ++GKVE
Sbjct: 431 GIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAA 490
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+L+E MK +G P+ SY ++ G + +A + M+ +P+ ++Y LI G
Sbjct: 491 RELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQG 550
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVP 371
LC + + + +LK+M+ +G P
Sbjct: 551 LCKNEEGDHAEQLLKEMISKGITP 574
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 132/267 (49%), Gaps = 2/267 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ P + Y ++I+ L + D + I++ + + L D YN++ G
Sbjct: 324 REGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGL--VPDSVTYNILINGYCRCGN 381
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA +M S P+ T+ ++ +L + ++ + G+ D N
Sbjct: 382 VKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNA 441
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C NGN++ AF +L E + P+ T++TLM G C +G VE A L+E M+S G
Sbjct: 442 LIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG 501
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +++N LISG K+G +++ ++ + M G P +Y ++ GL + A+
Sbjct: 502 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAE 561
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCN 350
+L+ MI + ++P+ +Y LI G+ N
Sbjct: 562 QLLKEMISKGITPNDNTYLSLIEGIGN 588
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 116/229 (50%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R A E M P V N +L+L + + + +Y ++ ++ N
Sbjct: 136 RGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFN 195
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ LC+ G L+ A + +PNV TY+T++HG C +G VE A + + M+
Sbjct: 196 IMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCR 255
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D+ T+ ISG+ K+GK+EE +LE+MK G P + +Y ++ G +K A
Sbjct: 256 GVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMA 315
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +M+ E + P+ +Y LIH L +++ D ++K+M ++G VP
Sbjct: 316 FDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVP 364
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 4/243 (1%)
Query: 131 YNVIKIYGNMA-GRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
YN I I+G + GR+ A +FD M P T+ ++ + E G+
Sbjct: 229 YNTI-IHGYCSRGRVEGA-RMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEK 286
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
++G+ A N L+ G C GNLE AF D+ ++ P V TY+ L+H L
Sbjct: 287 MKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCK 346
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
++EA G+++ M +G+ D+VT+NILI+G + G V++ L + M KG P +Y
Sbjct: 347 MDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTS 406
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++Y L + R +A +L +++ + + P + + LI G C ++ +LK+M Q
Sbjct: 407 LIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMK 466
Query: 369 FVP 371
VP
Sbjct: 467 VVP 469
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 164/386 (42%), Gaps = 32/386 (8%)
Query: 6 HFARNHRQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIF 65
HF ++ I SL S + + +T LA +H D S + +
Sbjct: 26 HFIKHLAHKITPSLISTALTSLHKTPDLAFQFVTH-------IGFGDLDIKSKCLAMAVI 78
Query: 66 SNLRDPISVISVLNQ------YSKRKDYN-----------PNEALYTLIINKLAQAKRFD 108
S+ + + +L + YS R+ +N LY L+I + KR D
Sbjct: 79 SHAPNSKPSLQLLKETINSGVYSIREVFNELGVARGVLGIKTYVLYDLLIRACCELKRGD 138
Query: 109 -AIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKT 165
A E D+M+ V + +K + R KA +M SV T
Sbjct: 139 DAFECFDMMKGKGVIPHVHACNDMLSLFLK-----SNRTEKAWVLYAEMFRMRIKSSVVT 193
Query: 166 FNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP 225
FN+++N+L + + LG++ + N ++ G C G +E A + D
Sbjct: 194 FNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMK 253
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
+ +P+ TY + + G+C++G +EEA G+LE+M+ G+ VT+N LI G +G +E
Sbjct: 254 CRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLE 313
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
++M +G P ++Y +++ L + EA ++ M + + P V+Y LI
Sbjct: 314 MAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILI 373
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVP 371
+G C V+ + +M+ +G P
Sbjct: 374 NGYCRCGNVKKAFTLHDEMISKGIQP 399
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+ AC N +L ++ E A+ + E + + +V T++ +++ LC++G +++A
Sbjct: 156 VHAC--NDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEF 213
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+ ME+ GI + VT+N +I G +G+VE + + MK +G P+S +Y + G+
Sbjct: 214 IGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCK 273
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
+ + EA ++ +M + P+ V+Y LI G CN+ +E KMV++G +P +
Sbjct: 274 EGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVST 333
Query: 376 WREIV 380
+ ++
Sbjct: 334 YNMLI 338
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 117/241 (48%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ A+ +M +PS+ F+ +L+ + + + + LG+ + +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C L A VL + K EPN+ T S+L++G C + EA L+++M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G +TVTFN LI GL K E M L++RM KGC P+ +Y V+ GL + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ P + Y +I GLC K ++D + K+M +G P + + ++ C
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 383 V 383
+
Sbjct: 301 L 301
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 133/282 (47%), Gaps = 3/282 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++LN+ + K P +Y II+ L + K D ++ + ++ + + R + + ++I
Sbjct: 241 FNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI-RPNVVTYSSLI 298
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
N GR S A L DM P V TF+ +++ V E + +Y K +
Sbjct: 299 SCLCNY-GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ + L+ G C + L+ A + + ++C P+V TY+TL+ G C+ VEE
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ M G+ +TVT+NILI GL + G + ++ + M G PN +Y +L GL
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+ +A + + +M P+ +Y +I G+C VED
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 131/289 (45%), Gaps = 12/289 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYG-NMA 141
Y PN + ++N +KR ++ ++ F G+ N + I+G +
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQM-------FVTGYQPNTVTFNTLIHGLFLH 199
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ S+A+ + M + C P + T+ +V+N L + + +E
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ GLC+ +++ A + E + PNV TYS+L+ LC G +A LL M
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
I+ D TF+ LI K+GK+ E KL + M + P+ +Y ++ G R E
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
AK++ M+ + P V+Y LI G C K VE+ V ++M Q+G V
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 121/238 (50%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RIS+A+ + M P+ TFN +++ L E + G + D
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+++ GLC+ G+ + AF +L++ + EP V Y+T++ GLC+ ++++A L + ME++
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI + VT++ LIS L G+ + +LL M + P+ ++ ++ + + + EA
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++L M+ + PS V+Y LI+G C +++ + + MV + P + + ++
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 110/230 (47%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
M R+ +A + M S +C+P V T+N ++ K E ++ ++ G+ +
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NIL++GL + G+ + A + E PN+ TY+TL+ GLC+ G +E+A + E +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ ++ T+NI+I G+ K GKVE+G L + KG P+ +Y ++ G K
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
EA L M + P+ Y LI E ++K+M GF
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 124/294 (42%), Gaps = 2/294 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN + +I+ L + ++ R+ V K C+ D Y V+ G
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRM-VAKGCQ-PDLVTYGVVVNGLCKRGDTDL 239
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M P V +N +++ L K + ++ G+ + + L+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC G A +L + ++ P+V T+S L+ ++G + EA L + M ID
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
VT++ LI+G +++E ++ E M K C+P+ +Y ++ G KR E E+
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + + V+Y LI GL + + K+MV G P + + ++
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------GR 143
N Y ++I L QA D ++I + + SDG N++ Y + G+
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEM-------VSDGVPPNIMT-YNTLLDGLCKNGK 481
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA+ + P++ T+N+++ + A + ++ + + GV+ D N
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G C G+ E A + E + PN Y+TL+ G+ E + L++ M S G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 264 IDADTVTFNILISGLRKQGKVEE 286
D T L++ + G++++
Sbjct: 602 FAGDASTIG-LVTNMLHDGRLDK 623
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 152/327 (46%), Gaps = 15/327 (4%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
VLK+ + +L + +RK + Y++II+ L + D ++ ++++
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERK-IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 121 KLCRFSDGFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
GF ++I IY + AGR + L DM P V F+ +++ V
Sbjct: 277 -------GFKADII-IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFV 328
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E + ++ + G+ D L+ G C+ L+ A ++LD + C PN+R
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T++ L++G C+ +++ L +M G+ ADTVT+N LI G + GK+E +L + M
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+ P+ SY+ +L GL D +A E+ ++ +M Y +IHG+CN V
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIVG 381
+D + + +G P + + ++G
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ KA L M S C P+++TFN+++N A L + ++ + GV D N
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L++G CE G LE A + E + P++ +Y L+ GLC+ G E+A + E++E
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
++ D +NI+I G+ KV++ L + KG P+ +Y ++ GL K EA
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 323 KELVGRMICERMSPSFVSYKKLIHG 347
L +M + SP+ +Y LI
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRA 571
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 145/318 (45%), Gaps = 14/318 (4%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV--IK 135
L Q R P ++ + + +A+ K++D + D+ ++++++ G +N+ +
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK-------GIAHNLYTLS 111
Query: 136 IYGNMAGR---ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
I N R +S A + + P TF+ ++N L E + ++
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G + LN L+ GLC NG + A ++D + +PN TY ++ +C+ G A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LL +ME I D V ++I+I GL K G ++ L M+ KG + Y ++ G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
R+ + +L+ MI +++P V++ LI + + + + + K+M+Q+G P
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 373 MGMWREIVGCVTFGKDNR 390
+ ++ F K+N+
Sbjct: 352 TVTYTSLID--GFCKENQ 367
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 139/311 (44%), Gaps = 26/311 (8%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN + ++IN +A D ++ +++ + + +D YN + G++
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV--VADTVTYNTLIQGFCELGKL 438
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A E +M S P + ++ ++L+ L + I+ K +E+D NI+
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G+C ++ A+ + P + +P+V+TY+ ++ GLC+KG++ EA L +ME +G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLE----------------------RMKGKGCYPN 302
+ T+NILI +G + KL+E RM G P+
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPD 618
Query: 303 SASYQEVL--YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
++ +L + L + +A L M P+ V+Y +I GL N ++ V V
Sbjct: 619 VFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGV 678
Query: 361 LKKMVQQGFVP 371
L +M ++G P
Sbjct: 679 LDQMFERGCQP 689
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 102/247 (41%), Gaps = 24/247 (9%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G KA+E + + +N++++ + +A + ++ S GV+ D
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN-------VEE--- 251
NI++ GLC+ G+L A + + + PN TY+ L+ +G+ +EE
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Query: 252 ------------AFGLLERMESEGIDADTVTFNILISG--LRKQGKVEEGMKLLERMKGK 297
A L RM G + D TF L+ L + V + L + MK
Sbjct: 591 CGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAM 650
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G PN +Y V+ GLL+ + ++ +M P+ V+ I GLC Q L
Sbjct: 651 GYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSA 710
Query: 358 DWVLKKM 364
+L+KM
Sbjct: 711 ILLLRKM 717
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 27/250 (10%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
+P + + + K K + +Y +II+ + A + D D+ + ++ + D
Sbjct: 472 EPEKALEIFEKIEKSK-MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV--KPDVK 528
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEI 182
YN++ G +S+A M P+ T+N+++ + SAKL EI
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Query: 183 Q--GIYTSAAKL-------------GVEIDACCLNILLKGLC--ENGNLEAAFYVLDEFP 225
+ G A+ L G E D LL+ C EN ++ A +
Sbjct: 589 KRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMK 648
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
+PNV TY+T++ GL + + G+L++M G + VT + ISGL KQ
Sbjct: 649 AMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHG 708
Query: 286 EGMKLLERMK 295
+ LL +M+
Sbjct: 709 SAILLLRKME 718
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLN---LLVSAKLYGEIQGIYTSAAKLGVEID 197
A + A+ TL M P V TF +L L +A +Y + ++ + +G + +
Sbjct: 597 ASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVY-DAPTLFKNMKAMGYKPN 655
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N ++KGL + VLD+ ++ C+PN T ST + GLC++ A LL
Sbjct: 656 VVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLR 715
Query: 258 RMESEGIDADT 268
+ME++ D T
Sbjct: 716 KMENDNEDVTT 726
>gi|297842851|ref|XP_002889307.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335148|gb|EFH65566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 397
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 137/288 (47%), Gaps = 15/288 (5%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
RDP + + + + N + +++LA A R D IED+++ K R +G
Sbjct: 49 RDPEKLFKLFQANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGR-REG 107
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL-VSAKLYGEIQGIYT 187
F +I +YG AG +A++T ++M Y C SVK+FN L +L L+ + ++
Sbjct: 108 FIVRIIMLYGK-AGMTKQALDTFYNMDLYGCKRSVKSFNAALQVLSFKPDLHTIREFLHD 166
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM-----HG 242
+ AK ++IDA NI +K CE G L+ A+ + E K +P+V TY+TL+ H
Sbjct: 167 APAKYRIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLKPDVVTYTTLISAFYKHE 226
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
C GN GL M +G + TFN+ I L + + + LL M P+
Sbjct: 227 RCVIGN-----GLWNLMVLKGCRPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPD 281
Query: 303 SASYQEVLYGLLDKKRFPEAKELV-GRMICERMSPSFVSYKKLIHGLC 349
S +Y V+ G RFP E V M + P+ Y+ +IH LC
Sbjct: 282 SITYNMVIKGFF-LARFPHMAERVYTAMHGKGYKPNVKIYQTMIHYLC 328
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +I+ + +R I + + + V K CR + F I+ N R A
Sbjct: 210 PDVVTYTTLISAFYKHERC-VIGNGLWNLMVLKGCRPNLTTFNVRIQFLVNRR-RAWDAN 267
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L MP P T+N+V+ A+ + +YT+ G + + ++ L
Sbjct: 268 DLLLLMPKLQVEPDSITYNMVIKGFFLARFPHMAERVYTAMHGKGYKPNVKIYQTMIHYL 327
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
C+ GN + A+ + + ++ PN+ T L+ GL +K +++A
Sbjct: 328 CKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKDQLDQA 371
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 151/314 (48%), Gaps = 3/314 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN ++ +IN L R +++ R+ ++ D N + ++G+ ++
Sbjct: 252 YEPNTITFSTLINGLCLEGRVSEALELVDRMV--EMGHKPDLITINTLVNGLCLSGKEAE 309
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ + M Y C P+ T+ VLN++ + + + +++DA +I++
Sbjct: 310 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 369
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC++G+L+ AF + +E + N+ TY+ L+ G C G ++ LL M I+
Sbjct: 370 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 429
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ VTF++LI K+GK+ E +L + M +G P++ +Y ++ G + +A ++V
Sbjct: 430 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 489
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTF 385
M+ + P+ ++ LI+G C ++D + +KM +G V + ++ G
Sbjct: 490 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 549
Query: 386 GKDNRNRVYVTETV 399
GK N + E V
Sbjct: 550 GKLNVAKELFQEMV 563
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 141/288 (48%), Gaps = 2/288 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y++II+ L + D ++ ++++ + ++ YN++ AGR + L D
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKGIT--TNIITYNILIGGFCNAGRWDDGAKLLRD 421
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P+V TF+++++ V E + ++ G+ D L+ G C+ +
Sbjct: 422 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 481
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A ++D + C+PN+RT++ L++G C+ +++ L +M G+ ADTVT+N
Sbjct: 482 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 541
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G + GK+ +L + M + PN +Y+ +L GL D +A E+ ++ +
Sbjct: 542 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 601
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
M Y +IHG+CN V+D + + +G P + + ++G
Sbjct: 602 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 649
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 113/239 (47%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ AI+ DM P+V F+ + + + K Y + + G+ + L+
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ C L AF + + K EPN T+STL++GLC +G V EA L++RM
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D +T N L++GL GK E M L+++M GC PN+ +Y VL + + A
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
EL+ +M + V Y +I GLC +++ + +M +G + + ++G
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 404
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 124/271 (45%), Gaps = 3/271 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+L KRK NPN ++++I+ + + E++ + + + D Y +
Sbjct: 418 LLRDMIKRK-INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA--PDTITYTSLID 474
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ KA + + M S C P+++TFN+++N A + ++ + GV
Sbjct: 475 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 534
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L++G CE G L A + E + PN+ TY L+ GLC+ G E+A +
Sbjct: 535 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 594
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E++E ++ D +NI+I G+ KV++ L + KG P +Y ++ GL K
Sbjct: 595 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 654
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
EA+ L +M + +P +Y LI
Sbjct: 655 GPLSEAELLFRKMEEDGHAPDGWTYNILIRA 685
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 117/233 (50%), Gaps = 2/233 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +PN + ++IN +A R D ++ +++ + + +D YN + G++
Sbjct: 495 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV--VADTVTYNTLIQGFCELGKL 552
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ A E +M S P++ T+ ++L+ L + I+ K +E+D NI+
Sbjct: 553 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 612
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G+C ++ A+ + P + +P V+TY+ ++ GLC+KG + EA L +ME +G
Sbjct: 613 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 672
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
D T+NILI G + +KL+E +K G ++++ + V+ L D K
Sbjct: 673 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDK 725
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 145 SKAIETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA------------- 190
S+ + T+ D ++ K ++LVL L +L G +YT +
Sbjct: 180 SRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCL 239
Query: 191 ---------KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
KLG E + + L+ GLC G + A ++D + +P++ T +TL++
Sbjct: 240 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 299
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GLC G EA L+++M G + VT+ +++ + K G+ M+LL +M+ +
Sbjct: 300 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 359
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
++ Y ++ GL A L M + ++ + ++Y LI G CN +D +L
Sbjct: 360 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 419
Query: 362 KKMVQQGFVPRM 373
+ M+++ P +
Sbjct: 420 RDMIKRKINPNV 431
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 2/276 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I L +A+R D ++++ + E L F Y + Y +G +KAI
Sbjct: 408 PNLHTYNTMICGLLKARRLDEALELLENM--ESLGVKPTAFSYVLFIDYYGKSGDPAKAI 465
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+T M PS+ N L L E + I+ K G+ D+ N+L+K
Sbjct: 466 DTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCY 525
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G ++ A +L E + CEP+V ++L++ L + G V+ A+ + R+++ +
Sbjct: 526 SKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTV 585
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+NIL++GL K+GK+ + ++L M GC PN+ ++ +L L A ++ R
Sbjct: 586 VTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCR 645
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
M +P ++Y +I+GL + ++ W +M
Sbjct: 646 MTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM 681
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K +PN Y L+++ ++KR + + D+ ++ + C + +N+I +
Sbjct: 823 KSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMR-SRGCE-PNAITHNIIISALVKSN 880
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++KA++ +++ S + P+ T+ +++ L+ A + I+ G ++ N
Sbjct: 881 NLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYN 940
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ G ++G ++ A + + K+ P++++Y+ L+ LC G ++EA E ++
Sbjct: 941 ILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLT 1000
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+D DTV++N +I+GL K +++E + L MK +G P+ +Y ++ L + A
Sbjct: 1001 GLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVA 1060
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ + + PS +Y LI G + V KKM+ G P
Sbjct: 1061 VKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSP 1109
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN YT+ I L +A+R D I + + E C D Y V+ AG++ KA
Sbjct: 268 PNIYTYTICIRALGRARRIDDAWGIFKEMDDEG-CG-PDVITYTVLIDALCAAGKLDKAK 325
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M + + P T+ +++ ++ + G D IL++ L
Sbjct: 326 ELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEAL 385
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++G+++ AF +LD + PN+ TY+T++ GL + ++EA LLE MES G+
Sbjct: 386 CKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTA 445
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++ + I K G + + E MK +G P+ A+ LY L + R EA+++
Sbjct: 446 FSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFND 505
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +SP V+Y L+ ++ +L +M+ +G P
Sbjct: 506 LHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEP 548
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 130/285 (45%), Gaps = 2/285 (0%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
++K+ + + +V ++++K +P Y +++ L + + ++ + +K
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+ F YN++ + RI+K + +M S C P+ T N++++ LV +
Sbjct: 826 G--THPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLN 883
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ +Y C L+ GL + G E A + +E C PN Y+ L+
Sbjct: 884 KALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILI 943
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
+G + G ++ A L ++M EGI D ++ IL+ L G+++E ++ E +K G
Sbjct: 944 NGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLD 1003
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
P++ SY ++ GL +R EA L M +SP +Y LI
Sbjct: 1004 PDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALI 1048
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 114/235 (48%)
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KA+E DM S P+ T+NL+L+ +K ++ +Y+ G E +A NI++
Sbjct: 814 KALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIII 873
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
L ++ NL A + E + P TY L+ GL + G E+A + E M G
Sbjct: 874 SALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCG 933
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
++V +NILI+G K G+++ +L ++M +G P+ SY ++ L R EA +
Sbjct: 934 PNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQY 993
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P VSY +I+GL + +++ + +M +G P + + ++
Sbjct: 994 FEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALI 1048
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
Y+ + + G K + L +M S P++ T+ + + L A+ + GI+
Sbjct: 238 YSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMD 297
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G D +L+ LC G L+ A + + + P+ TY TLM + G++E
Sbjct: 298 DEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLE 357
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
ME +G D VT+ ILI L K G V+ +L+ M KG +PN +Y ++
Sbjct: 358 TVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMI 417
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
GLL +R EA EL+ M + P+ SY I
Sbjct: 418 CGLLKARRLDEALELLENMESLGVKPTAFSYVLFI 452
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 137/302 (45%), Gaps = 2/302 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ ++P+ Y +++K + + ++ ++V+ D Y ++ +G
Sbjct: 332 RASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYA--PDVVTYTILIEALCKSG 389
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ +A + L M + +P++ T+N ++ L+ A+ E + + LGV+ A
Sbjct: 390 DVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYV 449
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+ + ++G+ A + K+ P++ + ++ L E G + EA + +
Sbjct: 450 LFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKC 509
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D+VT+N+L+ K G++++ +LL M KGC P+ ++ L R A
Sbjct: 510 GLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAA 569
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
++ GR+ +++P+ V+Y L+ GL + + + M + G P + ++ C
Sbjct: 570 WKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDC 629
Query: 383 VT 384
++
Sbjct: 630 LS 631
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 138/341 (40%), Gaps = 41/341 (12%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
DP I KR P+ A + LA+ R EDI + K D
Sbjct: 460 DPAKAIDTFETMKKR-GIMPSIAACNASLYTLAETGRISEAEDIFN--DLHKCGLSPDSV 516
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA-------KLYGEI 182
YN++ + AG+I KA + L +M S C P V N ++N L A K++G +
Sbjct: 517 TYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRL 576
Query: 183 QGI----------------------------YTSAAKLGVEIDACCLNILLKGLCENGNL 214
+ + + S + G + N LL L +N +
Sbjct: 577 KNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAV 636
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A + NC P+V TY+T+++GL +G ++ AF +M+ + + D VT L
Sbjct: 637 DLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTL 695
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCY-PNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
I G+ + G+VE+ +K++ + C NS + E++ +L + EA ++C
Sbjct: 696 IPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNS 755
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ-GFVPRM 373
+ LI LC +K D V K + G P +
Sbjct: 756 VCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTL 796
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 2/230 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+++++N +++ L+ + + ++ G + N+LL ++ + + +
Sbjct: 794 PTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDL 853
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
E + CEPN T++ ++ L + N+ +A L + S T+ LI GL K
Sbjct: 854 YSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLK 913
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ E+ MK+ E M GC PNS Y ++ G A EL +M+ E + P S
Sbjct: 914 AGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKS 973
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
Y L+ LC +++ +++ G P + I+ GK R
Sbjct: 974 YTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIIN--GLGKSRR 1021
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 162/393 (41%), Gaps = 20/393 (5%)
Query: 2 ILRSHFARNHRQSIIQSLSSASTI-------TRKRTFALASPSASHQDSD----HHAYKL 50
+L +H I++LS+ S + TR A + + + D+D ++ +
Sbjct: 31 VLTNHGGPTTNFVKIKTLSNGSLLNLKKHGTTRVGHRAFRTITRCNHDNDLVVVNNGKRK 90
Query: 51 NHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDA- 109
+K +S EV+ I ++ DP S S S+ ++ ++ L + +R +
Sbjct: 91 KNKTSVSEEEVMTILKSISDPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDM 150
Query: 110 --IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
+ D+MQ+ + + + Y I ++ G I +A L M + ++N
Sbjct: 151 VFVFDLMQKKVI-----YRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYN 205
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+++LL+ E +Y G++ + L+ L G+ +L+E
Sbjct: 206 GLIHLLLPG-FCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSI 264
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
PN+ TY+ + L +++A+G+ + M+ EG D +T+ +LI L GK+++
Sbjct: 265 GLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKA 324
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+L +M+ P+ +Y ++ K M + +P V+Y LI
Sbjct: 325 KELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEA 384
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LC V+ +L M +G P + + ++
Sbjct: 385 LCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMI 417
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 120/265 (45%), Gaps = 20/265 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
PN + +II+ L ++ + D+ + G F YG + AG
Sbjct: 864 PNAITHNIIISALVKSNNLNKALDLYYELM--------SGDFSPTPCTYGPLIDGLLKAG 915
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ---GIYTSAAKLGVEIDAC 199
R +A++ +M Y C P+ +N+++N + GEI ++ K G+ D
Sbjct: 916 RSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKS---GEIDFACELFKKMVKEGIRPDLK 972
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
IL++ LC G ++ A +E +P+ +Y+ +++GL + ++EA L M
Sbjct: 973 SYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEM 1032
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
++ GI D T+N LI L GKV+ +K+ E ++ G P+ +Y ++ G
Sbjct: 1033 KNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNK 1092
Query: 320 PEAKELVGRMICERMSPSFVSYKKL 344
+A + +M+ SP+ ++ +L
Sbjct: 1093 DQAFSVFKKMMVVGCSPNTETFAQL 1117
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 1/204 (0%)
Query: 181 EIQGIYTSAAK-LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ Q ++ K LG+ N L+ GL + E A + ++ PN TY+ L
Sbjct: 778 DAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLL 837
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ + + + + L M S G + + +T NI+IS L K + + + L +
Sbjct: 838 LDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDF 897
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P +Y ++ GLL R +A ++ M+ P+ V Y LI+G ++
Sbjct: 898 SPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACE 957
Query: 360 VLKKMVQQGFVPRMGMWREIVGCV 383
+ KKMV++G P + + +V C+
Sbjct: 958 LFKKMVKEGIRPDLKSYTILVECL 981
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 107/226 (47%), Gaps = 6/226 (2%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D++P Y +I+ L +A R + I + + ++ C + YN++ +G I
Sbjct: 896 DFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEM-LDYGCG-PNSVIYNILINGFGKSGEID 953
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLL-VSAKLYGEIQGIYTSAAKL-GVEIDACCLNI 203
A E M P +K++ +++ L ++ ++ +Q Y KL G++ D N
Sbjct: 954 FACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQ--YFEELKLTGLDPDTVSYNF 1011
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ GL ++ L+ A + E + P++ TY+ L+ L G V+ A + E ++ G
Sbjct: 1012 IINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVG 1071
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
++ T+N LI G G ++ + ++M GC PN+ ++ ++
Sbjct: 1072 LEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +Y ++IN ++ D ++ +++ E + D Y ++ + GRI +A+
Sbjct: 934 PNSVIYNILINGFGKSGEIDFACELFKKMVKEGI--RPDLKSYTILVECLCITGRIDEAV 991
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ ++ P ++N ++N L ++ E +++ G+ D N L+ L
Sbjct: 992 QYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHL 1051
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
G ++ A + +E EP+V TY+ L+ G GN ++AF + ++M G +T
Sbjct: 1052 GIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNT 1111
Query: 269 VTFNILISGLRKQGKVE 285
TF L + + G V
Sbjct: 1112 ETFAQLPNKYPRAGLVH 1128
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 4/167 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT+++ L R D + +K+ L D YN I + R+ +A+
Sbjct: 969 PDLKSYTILVECLCITGRIDEAVQYFEELKLTGLD--PDTVSYNFIINGLGKSRRLDEAL 1026
Query: 149 ETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M + P + T+N L+L+L ++ K+ ++ +Y +G+E N L++G
Sbjct: 1027 SLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVK-MYEELQLVGLEPSVFTYNALIRG 1085
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+GN + AF V + C PN T++ L + G V FG
Sbjct: 1086 HSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPFG 1132
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 9/136 (6%)
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N ++ LR+Q ++E+ + + + M+ K Y N +Y + L K A + +M
Sbjct: 135 NYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTE 194
Query: 332 ERMSPSFVSYKKLIH----GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
+ SY LIH G CN+ L V K+M+ +G P M + ++ +
Sbjct: 195 VGFILNAYSYNGLIHLLLPGFCNEAL-----KVYKRMISEGMKPSMKTYSALMVALGRRG 249
Query: 388 DNRNRVYVTETVDSLA 403
D R + + E + S+
Sbjct: 250 DTRKIMNLLEEMKSIG 265
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 122/247 (49%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W + T VL L+ K + + G Y + G
Sbjct: 85 SGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 144
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 145 FNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324
Query: 381 -GCVTFG 386
GC G
Sbjct: 325 DGCCKEG 331
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 132/255 (51%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 143 YFFNILMHRFCKDGDIRLA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 199
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 260 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKIT 319
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 320 YTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 366 QQGFVPRMGMWREIV 380
G P + I+
Sbjct: 380 SVGLKPDARTYTMII 394
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 111/211 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 210 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G K
Sbjct: 270 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCK 329
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 330 EGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDART 389
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 209 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL--VPNGVTFTTLIDGHCKNGRVDLA 266
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 267 MEIYKQMLSQSLSPDLITYN-----------------------------------TLIYG 291
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ A +++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 292 LCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLD 351
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G P++ +Y ++ K + +L+
Sbjct: 352 EVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLK 411
Query: 328 RMICERMSPSFVSYKKLIHG 347
M + PS V+Y L++G
Sbjct: 412 EMQRDGHVPSVVTYNVLMNG 431
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 136/285 (47%), Gaps = 3/285 (1%)
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
+++N L + E ++Q++K CR + YN I + GR A+ L DM
Sbjct: 235 IVLNSLCTQGKLSKAESMLQKMKN---CRLPNAVTYNTILNWYVKKGRCKSALRILDDME 291
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
+ T+N++++ L K + ++ + D C N L+ G G +
Sbjct: 292 KNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKIN 351
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A Y+ ++ +Q+ +P+V TY+ L+ G C G +EA +L M+ G+ +T++ L+
Sbjct: 352 LAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALL 411
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+G K K+ + L++ ++ + N Y ++ G +AK+++ M+ + +
Sbjct: 412 NGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGID 471
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P ++Y LI+G+C ++ + +L +M + G +P ++ +V
Sbjct: 472 PDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLV 516
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 142/293 (48%), Gaps = 21/293 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA- 147
PN LYT ++ +A A E + + + + ++ +N + G I++A
Sbjct: 507 PNNVLYTTLVFYFCKAGH--AKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAE 564
Query: 148 --------IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
++ FD+ S+NC + ++ N+L E +Y + + G D C
Sbjct: 565 QFKQYMSRMKISFDVASFNCI--IDSYCQRGNVL-------EAFSVYDNMVRHGWPPDIC 615
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
LL+GLC+ G+L A + ++ C + +T +TL+ G+C+ G ++EA L E+M
Sbjct: 616 TYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKM 675
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ I DT T+ IL+ G K+GKV + LL+ M KG P++ +Y +L GL+++ +
Sbjct: 676 VTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQV 735
Query: 320 PEAKELVGRMIC-ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A + +IC E + ++Y +++G + +++ +++ M + P
Sbjct: 736 KAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYP 788
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 145/325 (44%), Gaps = 25/325 (7%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR---FSDGFFYNV 133
+L Q K P+ YT ++N L + A + Q I +C+ ++D YN
Sbjct: 705 ILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI----ICKEGLYADCIAYNS 760
Query: 134 IKIYGNMAGRISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ + G + G IE L +M +PS ++N++++ + +Y K
Sbjct: 761 M-MNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKE 819
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK------ 246
G++ D +L+ GLCE G +E A L++ + P+ + L+ EK
Sbjct: 820 GIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNA 879
Query: 247 ----------GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
G+++ AF L E M++ G+ V + ++ GL K GKVEE + + +
Sbjct: 880 LQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMR 939
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
G P A++ +++GL + + +A L M + V+Y LI GLCN+K + D
Sbjct: 940 AGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICD 999
Query: 357 VDWVLKKMVQQGFVPRMGMWREIVG 381
+ ++M +G +P + + + G
Sbjct: 1000 ALDLYEEMKSKGLLPNITTYITLTG 1024
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 3/231 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ A +F M S+ + N +LN LV + + +D
Sbjct: 174 GKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTC 233
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCE-PNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI+L LC G L A +L + +NC PN TY+T+++ +KG + A +L+ ME
Sbjct: 234 NIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDME 291
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI+AD T+NI+I L K + LL+RM+ P+ SY +++G + +
Sbjct: 292 KNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKIN 351
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A + +M+ + + PS +Y LI G C ++ VL +M G P
Sbjct: 352 LAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRP 402
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 118/273 (43%), Gaps = 31/273 (11%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-------SAKLYGEIQGIYTSAAKLGV 194
G++ A+ L M P + +LN LV ++ ++ EI K G+
Sbjct: 698 GKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI------ICKEGL 751
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D N ++ G + G + ++ + P+ +Y+ LMHG +KG +
Sbjct: 752 YADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLY 811
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L M EGI D VT+ +LI GL + G +E +K LE+M +G +P++ ++ ++
Sbjct: 812 LYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFS 871
Query: 315 DKKRFPEAKELVGRM-----------ICERMS-----PSFVSYKKLIHGLCNQKLVEDVD 358
+K + A +L M + E M PS V+ ++ GLC VE+
Sbjct: 872 EKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAI 931
Query: 359 WVLKKMVQQGFVPRMGMWREIVG--CVTFGKDN 389
V +++ G VP + + ++ C F D+
Sbjct: 932 IVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDD 964
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR +A L++M PS T++ +LN G + + I+
Sbjct: 383 GRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMY 442
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
IL+ G C+ G + A +L +P+V TYS L++G+C+ G + E +L RM+
Sbjct: 443 TILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQK 502
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ + V + L+ K G +E +K + G NS + +L + E
Sbjct: 503 SGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAE 562
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A++ M ++S S+ +I C + V + V MV+ G+ P
Sbjct: 563 AEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPP 612
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 123/299 (41%), Gaps = 12/299 (4%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK-- 135
L +Y + + + N +YT++I+ Q + I++ C +DG +VI
Sbjct: 426 LIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILK-------CMLADGIDPDVITYS 478
Query: 136 -IYGNMA--GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ M G I + E L M P+ + ++ A E + +
Sbjct: 479 ALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRS 538
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+ ++ N LL G + A + +V +++ ++ C++GNV EA
Sbjct: 539 GLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEA 598
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
F + + M G D T+ L+ GL + G + + + + + K C + + +L G
Sbjct: 599 FSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVG 658
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ EA +L +M+ + P +Y L+ G C + V +L+ M+++G VP
Sbjct: 659 ICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVP 717
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 104/231 (45%), Gaps = 20/231 (8%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY--------------NVI 134
P+ Y L+I L + + ++++ +E + F D + N +
Sbjct: 823 PDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGV--FPDNLAFDILIKAFSEKSKMSNAL 880
Query: 135 KIYGNM--AGRISKAIETLFDMPSYNCWPS-VKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+++ M G I A E DM + PS V ++V L K+ I +++S +
Sbjct: 881 QLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAII-VFSSIMR 939
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ L+ GLC+ ++ AF++ + +V TY+ L+ GLC K + +
Sbjct: 940 AGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICD 999
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
A L E M+S+G+ + T+ L + G +++G KLL+ ++ +G P+
Sbjct: 1000 ALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 79 SGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDILECGYPASLYF 138
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 198
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 318
Query: 381 -GCVTFG 386
GC G
Sbjct: 319 DGCCKEG 325
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 137 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 193
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 194 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 253
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 313
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 314 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 366 QQGFVPRMGMWREIV 380
G P +G + I+
Sbjct: 374 SVGLKPDIGTYTMII 388
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 109/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 204 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D T+ LI G K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 323
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 324 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGT 383
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G P
Sbjct: 384 YTMIINEFCKKGDVWKGSKLLKEMQRNGHAP 414
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL--VPNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYN-----------------------------------TLIYG 285
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ A ++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 286 LCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 345
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G P+ +Y ++ K + +L+
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLK 405
Query: 328 RMICERMSPSFVSYKKLIHG 347
M +PS V+Y L++G
Sbjct: 406 EMQRNGHAPSVVTYNVLMNG 425
>gi|302811221|ref|XP_002987300.1| hypothetical protein SELMODRAFT_125836 [Selaginella moellendorffii]
gi|300144935|gb|EFJ11615.1| hypothetical protein SELMODRAFT_125836 [Selaginella moellendorffii]
Length = 511
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 170/364 (46%), Gaps = 49/364 (13%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK P+ Y ++I + R +A ++ + +KV+K R D F +N + + AG+
Sbjct: 140 RKMKLPSSMSYNIVIAACVKRGRNEAAVELFREMKVKK--RVPDIFTFNTVIQSLSKAGK 197
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A++ + +M C P+ TF L+++ L AK E + + ++G D L
Sbjct: 198 FKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVLEVMDRVGCVPDVVLLTA 257
Query: 204 LLKGLCENGNLEAAFYVLDEF---PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G + G ++ A + + ++ +PN+RT++ ++HGLC+ V EA L+ RME
Sbjct: 258 LISGHLKEGRVDDASRLFERMLSGGQRWSKPNLRTFNIMIHGLCKANKVGEADALVRRME 317
Query: 261 SE-------------------------------------GIDADTVTFNILISGLRKQGK 283
E G D+VTF IL+S KQ +
Sbjct: 318 DECGVAPDEFTFNTIIDGHFKAGDSKGAFKQLFQEMSRFGCHPDSVTFTILVSESCKQRR 377
Query: 284 VEEGMKLLERM---KGKGCYPNSASYQEVLYGLLDKKRFPEA-KELVGRMICERMS-PSF 338
+ E ++L+E+M KG GC P++ S+ +L L R EA + G M R P
Sbjct: 378 IHEALELVEQMTKNKG-GCAPDTLSFNALLGCLCCDGRLEEAVAKFWGEMRERRECWPDA 436
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDN-RNRVYVTE 397
V++ L+ C Q+ +E ++ +M+ +GFVP G+ +V + G D+ R+R ++
Sbjct: 437 VTHALLVRQCCKQRNIELACRIVDEMLHRGFVPTPGIASMLVNLIQSGSDDARHRQWLQS 496
Query: 398 TVDS 401
+ S
Sbjct: 497 FLSS 500
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 8/234 (3%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + A E + M +P T N +L+ L +Y ++ V+ DA
Sbjct: 22 GGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLYEKMSRSFVKADAFT 81
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR---TYSTLMHGLCEKGNVEEAFGLLE 257
NILL GLC+ G ++ A L + E VR Y L+ GLC+ G + A +
Sbjct: 82 YNILLHGLCKGGRIQEACQKLSAALRDR-EAPVRHELLYEALIGGLCKVGKYDHAMAVFR 140
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+M+ ++++NI+I+ K+G+ E ++L MK K P+ ++ V+ L
Sbjct: 141 KMKL----PSSMSYNIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTFNTVIQSLSKAG 196
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+F EA ++V M+ + SP+ +++ L+HGLC K + + VL+ M + G VP
Sbjct: 197 KFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVLEVMDRVGCVP 250
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+V+T + ++ LC+ G V++A L+ M +G DTVT N L+ GL K KVE MKL
Sbjct: 8 DVKTCNIVVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLY 67
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP--SFVSYKKLIHGLC 349
E+M ++ +Y +L+GL R EA + + + +R +P + Y+ LI GLC
Sbjct: 68 EKMSRSFVKADAFTYNILLHGLCKGGRIQEACQKLSAALRDREAPVRHELLYEALIGGLC 127
Query: 350 NQKLVEDVDWVLKKM 364
+ V +KM
Sbjct: 128 KVGKYDHAMAVFRKM 142
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 154/322 (47%), Gaps = 8/322 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
LS T VL+ ++ P + + + K ++ E + L++ L +A+ +A + +
Sbjct: 69 LSRTTVLQTLRLIKVPADGLRFFD-WVYNKGFSHKEQSFFLMLEFLGRARNLNAARNFLF 127
Query: 116 RI--KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
I + + D +F ++I+ YGN AG +++ M PSV TFN +L++L
Sbjct: 128 SIEKRSNGCVKLQDRYFNSLIRSYGN-AGLFQESVNLFQTMKKMGISPSVLTFNSLLSIL 186
Query: 174 VSAKLYGEIQGIYTSAAKL-GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
+ G ++ + GV D+ N L+ G C+N ++ AF + E +C P+
Sbjct: 187 LKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPD 246
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERM--ESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
V TY+T++ GLC G V+ A LL M ++ + + V++ L+ G + +++E + +
Sbjct: 247 VVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLV 306
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE-LVGRMICERMSPSFVSYKKLIHGLC 349
M +G PN+ +Y ++ GL + R+ E K L+G SP ++ LI C
Sbjct: 307 FHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHC 366
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
+ ++ V ++M+ P
Sbjct: 367 DAGHLDAAMKVFQEMLNMKLHP 388
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 131/302 (43%), Gaps = 9/302 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NP+ Y II+ L +A + +++ + + + Y + M I +A
Sbjct: 244 NPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEA 303
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA-AKLGVEIDACCLNILLK 206
+ +M + P+ T+N ++ L A Y EI+G A DAC NIL+K
Sbjct: 304 LLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIK 363
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL-ERMESEGID 265
C+ G+L+AA V E P+ +YS L+ LC + ++A L E E E +
Sbjct: 364 AHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLL 423
Query: 266 AD------TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+N++ L GK ++ K+ ++ +G + +SY+ ++ GL + +F
Sbjct: 424 GKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGA-QDPSSYRTLITGLCREGKF 482
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A EL+ M+ P +Y+ LI GL L++M++ ++P + +
Sbjct: 483 KAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSV 542
Query: 380 VG 381
+
Sbjct: 543 LA 544
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L++ G + + + K P+V T+++L+ L ++G A + + M
Sbjct: 144 FNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMR 203
Query: 261 -SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ G+ D+ TFN LISG K V++ + + M+ C P+ +Y ++ GL +
Sbjct: 204 RTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKV 263
Query: 320 PEAKELVGRMI--CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
A L+ M+ + P+ VSY L+ G C ++ +++ V +M+ +G P +
Sbjct: 264 KIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYN 323
Query: 378 EIV 380
++
Sbjct: 324 TLI 326
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 132/291 (45%), Gaps = 12/291 (4%)
Query: 52 HKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIE 111
H + +S T +L+ + ++ + V ++ R PN Y +I L++A R+D I+
Sbjct: 281 HPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTR-GLKPNAVTYNTLIKGLSEAHRYDEIK 339
Query: 112 DIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
+ I + FS D +N++ AG + A++ +M + P ++++++
Sbjct: 340 GFL--IGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLI 397
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEID-------ACCLNILLKGLCENGNLEAAFYVLDE 223
L + + + ++ + V + A N++ + LC NG + A V +
Sbjct: 398 RTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQ 457
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283
K+ + + +Y TL+ GLC +G + A+ LL M D T+ +LI GL K G+
Sbjct: 458 LMKRGAQ-DPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGE 516
Query: 284 VEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
L+RM P + ++ VL L+ +K ++ L+ M+ +R+
Sbjct: 517 ALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRI 567
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 139/299 (46%), Gaps = 15/299 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ +P+ ++ +IN + + E++ + + + F Y+ + R
Sbjct: 143 ERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNI--FPTTITYSSMIDGFCKHSR 200
Query: 144 ISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLY--------GEI---QGIYTSAAK 191
+ A + +FD M S C P + T N +++ AK + G + Q ++
Sbjct: 201 LEDA-KHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMIS 259
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
GV D N LL GLCENG LE A + F K + + T + +++G+C+ V+E
Sbjct: 260 NGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDE 319
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A+ L + G++ D VT+NILI K+G + M KG P++ +Y ++
Sbjct: 320 AWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVD 379
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
G + R EA+++V M+ E SP V++ LI G C V+D + +M Q+G V
Sbjct: 380 GFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLV 438
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 163/383 (42%), Gaps = 49/383 (12%)
Query: 44 DHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQ 103
D + + D ++ ++ L D +S +++L + + + N +Y+ I+++L +
Sbjct: 34 DRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQ-IKANVVIYSAIVDRLCK 92
Query: 104 AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSV 163
++I + + + F + YN + G+ S A + L DM N P V
Sbjct: 93 DGNHIKAQNIFTEMHEKGI--FPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDV 150
Query: 164 KTFNLVLNLLV-------SAKLYGEI---------------------------------- 182
TF+ ++N V + +LY E+
Sbjct: 151 VTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDL 210
Query: 183 ---QGIYTSAAKLGVEIDACCL--NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
+G L ID CC L+ G C+ GN+ A + E P++ T +
Sbjct: 211 MVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCN 270
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
TL+ GLCE G +E+A + + + +D DT T NI+I+G+ K KV+E L +
Sbjct: 271 TLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVN 330
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G + +Y ++ + + F A+++ M+C+ + PS V+Y ++ G C Q +E+
Sbjct: 331 GVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEA 390
Query: 358 DWVLKKMVQQGFVPRMGMWREIV 380
++ MV +G P + + ++
Sbjct: 391 RQMVDSMVSEGCSPDVVTFSTLI 413
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 121/260 (46%), Gaps = 12/260 (4%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-----RISKAIETL 151
+I+ Q + +D+ Q + S+G +++ +AG ++ KA+E
Sbjct: 237 LIHGFCQVGNVNVAQDLFQEM-------ISNGVSPDIVTCNTLLAGLCENGKLEKALEMF 289
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
T N+++N + E ++ S GVE D NIL+ +
Sbjct: 290 KVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKE 349
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
GN A + E + P+ TY++++ G C++ +EEA +++ M SEG D VTF
Sbjct: 350 GNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTF 409
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
+ LI G K G+V++G++L M +G ++ +Y +++G A+++ M+
Sbjct: 410 STLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVS 469
Query: 332 ERMSPSFVSYKKLIHGLCNQ 351
+ P ++++ ++ GLC +
Sbjct: 470 SGVCPDTITFRSMLAGLCTK 489
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 5/183 (2%)
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC++GN A + E ++ PNV TY+ ++ G C G +A LL M ID D
Sbjct: 90 LCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPD 149
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VTF+ LI+ K+GKV +L M + +P + +Y ++ G R +AK +
Sbjct: 150 VVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFD 209
Query: 328 RMICERMSPSFVSYKKLIHGLCNQK--LVEDVDWVLKKMVQQGFVPRM---GMWREIVGC 382
M+ + SP ++ LI G C K L+ V V Q M G+ +IV C
Sbjct: 210 LMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTC 269
Query: 383 VTF 385
T
Sbjct: 270 NTL 272
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 1/230 (0%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M C +V TF ++N L + + + G + DA ++ G+C+ G+
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+A +L + + + NV YS ++ LC+ GN +A + M +GI + +T+N
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I G GK + +LL M + P+ ++ ++ + + + A+EL M+
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GC 382
+ P+ ++Y +I G C +ED + MV +G P + ++ GC
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGC 230
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
++ + + A +IIN + + + D D+ + V + +D YN++ G
Sbjct: 293 QKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGV--ETDVVTYNILIGVFVKEG 350
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+A + +M PS T+N +++ E + + S G D +
Sbjct: 351 NFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFS 410
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+KG C+ G ++ + E ++ + TY+ L+HG C+ G++ A + E M S
Sbjct: 411 TLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSS 470
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
G+ DT+TF +++GL + ++++G+ +LE ++
Sbjct: 471 GVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQ 503
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 14/276 (5%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N +T ++N L + R ++ R+ E D Y I G A+
Sbjct: 9 NVVTFTTLMNGLCREGRVLQALALVDRMVEEG--HQPDAVTYGTIVNGMCKLGDTVSALN 66
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
L M +V ++ +++ L + + Q I+T + G+ + N ++ G C
Sbjct: 67 MLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYC 126
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
G A +L + ++N +P+V T+S L++ ++G V A L M I T+
Sbjct: 127 SYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTI 186
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR-----FPE--- 321
T++ +I G K ++E+ + + M KGC P+ + ++ G KR F +
Sbjct: 187 TYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGN 246
Query: 322 ---AKELVGRMICERMSPSFVSYKKLIHGLC-NQKL 353
A++L MI +SP V+ L+ GLC N KL
Sbjct: 247 VNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKL 282
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 147/291 (50%), Gaps = 8/291 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P +Y +IN Q + I +++K + D YN + ++KA
Sbjct: 189 PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI--RPDHITYNALINGLCKLEMVTKAE 246
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILL 205
+ + +M PSV+TFN +++ +A G+++ +T + + G++ D ++
Sbjct: 247 DLVMEMEKSGVDPSVETFNTLIDAYGTA---GQLEKCFTVLSDMQQKGIKSDVISFGSVV 303
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
K C+NG + A +LD+ ++ PN + Y++++ E G+ E+AF L+E+M++ G+
Sbjct: 304 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS 363
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
A VT+N+L+ GL + +++E +L+ ++ +G P+ SY ++ +K +A EL
Sbjct: 364 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 423
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ M + P+ +Y L+ L + V D++ + ++M+ + P ++
Sbjct: 424 LQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 474
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 139/338 (41%), Gaps = 38/338 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++++ L +A R D +M + + F DGF Y+++ G +
Sbjct: 84 PNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSM--FPDGFTYSILFDGLTRTGESRTML 141
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ T +++LN L + + + G+ N L+ G
Sbjct: 142 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGY 201
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE----------------------- 245
C+ +L AF + ++ ++ P+ TY+ L++GLC+
Sbjct: 202 CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSV 261
Query: 246 ------------KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
G +E+ F +L M+ +GI +D ++F ++ K GK+ E + +L+
Sbjct: 262 ETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 321
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M K PN+ Y ++ ++ +A LV +M +S S V+Y L+ GLC
Sbjct: 322 MIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ 381
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNR 390
+++ + ++ + QG P + + I+ C G ++
Sbjct: 382 IDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDK 419
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 107/227 (47%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S + P T+N ++N L ++ + + + K GV+ N L+ G
Sbjct: 217 MKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQ 276
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
LE F VL + ++ + +V ++ +++ C+ G + EA +L+ M + + + +N
Sbjct: 277 LEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNS 336
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I + G E+ L+E+MK G + +Y +L GL + EA+EL+ + +
Sbjct: 337 IIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 396
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P VSY +I CN+ + +L++M + G P + + +V
Sbjct: 397 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLV 443
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 6/257 (2%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F YNV+ +G+ S A++ +M P+ T+N +++ V G+++ +
Sbjct: 15 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKG---GDLEAGF 71
Query: 187 TSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
++ G + + N+LL GLC G ++ ++DE + P+ TYS L GL
Sbjct: 72 RLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL 131
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
G L +G+ T +IL++GL K GKV + ++LE + G P +
Sbjct: 132 TRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 191
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
Y ++ G + A + +M + P ++Y LI+GLC ++V + ++ +
Sbjct: 192 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 251
Query: 364 MVQQGFVPRMGMWREIV 380
M + G P + + ++
Sbjct: 252 MEKSGVDPSVETFNTLI 268
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 136/319 (42%), Gaps = 8/319 (2%)
Query: 56 LSPTEVL-----KIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
L PT V+ + +RD + Q K + P+ Y +IN L + +
Sbjct: 187 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQM-KSRHIRPDHITYNALINGLCKLEMVTKA 245
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
ED++ ++ + S F +I YG AG++ K L DM V +F V+
Sbjct: 246 EDLVMEMEKSGV-DPSVETFNTLIDAYGT-AGQLEKCFTVLSDMQQKGIKSDVISFGSVV 303
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
E I V +A N ++ E+G+ E AF ++++
Sbjct: 304 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS 363
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
++ TY+ L+ GLC ++EA L+ + ++G+ D V++N +IS +G ++ ++L
Sbjct: 364 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 423
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L+ M G P +Y ++ L R + + L +M+ + + PS Y ++
Sbjct: 424 LQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 483
Query: 351 QKLVEDVDWVLKKMVQQGF 369
+ V + K+M ++G
Sbjct: 484 CENDSKVASLKKEMSEKGI 502
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 8/209 (3%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
DA N+++ GL +G A V DE PN TY+T++ G + G++E F L
Sbjct: 15 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
++M +G + VT+N+L+SGL + G+++E L++ M +P+ +Y + GL
Sbjct: 75 DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL--- 131
Query: 317 KRFPEAKELVGRMICERMSPSFV----SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
R E++ ++ + E + + + L++GLC V + VL+ +V G VP
Sbjct: 132 TRTGESRTMLS-LFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 190
Query: 373 MGMWREIVGCVTFGKDNRNRVYVTETVDS 401
++ ++ +D R + E + S
Sbjct: 191 TVIYNTLINGYCQVRDLRGAFCIFEQMKS 219
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 100/211 (47%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P ++N+V+ L + + ++ +GV + N ++ G + G+LEA F +
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+ +PN+ TY+ L+ GLC G ++E L++ M S + D T++IL GL +
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ + L KG + + +L GL + +A++++ ++ + P+ V
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LI+G C + + + ++M + P
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRP 224
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+ T M PS FN +L + K + + + G+ D L I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ LC ++ AF L + K +P+ T++TL+ GLC +G + EA L ++M EG
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+ LI+GL K G ++LL M+ C PN + ++ L ++ EA
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ MI + +SP+ V+Y LIHGLC + V ++ +MV +P + +V
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 141/299 (47%), Gaps = 14/299 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------ 140
+ P+ +T +I L + + ++ +GF NV+ YG +
Sbjct: 136 HQPDATTFTTLIRGLCVEGKIGEALHLFDKM-------IGEGFQPNVVT-YGTLINGLCK 187
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G S AI L M NC P+V F+ +++ L + E I++ G+ +
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ GLC+ + +++E P+V T +T++ LC++G V EA +++ M
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G++ + VT+N L+ G + +V+ +K+ + M K C N SY ++ G +
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+A L M + ++P+ V+Y LIHGLC+ ++D + +MV +G +P + +R +
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 426
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ P V T +V+N L KLG + DA L++GLC G
Sbjct: 96 MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A ++ D+ + +PNV TY TL++GLC+ GN A LL ME + V F+
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI L K +V E + M KG PN +Y +++GL + L+ M+ +
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P + ++ LC + +V + V+ M+ +G P + + ++
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 145/317 (45%), Gaps = 14/317 (4%)
Query: 64 IFSNLRDPI----SVISVLNQYSK--RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI 117
+FS L D + V N +S+ K +PN Y +I+ L + + + +M +
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
K+ D F N + G +++A + + M P+V T+N +++
Sbjct: 272 VDSKI--MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD---GHC 326
Query: 178 LYGEIQ---GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
L E+ ++ + + N L+ G C+ +++ A Y+ +E +Q PN
Sbjct: 327 LRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 386
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TY+TL+HGLC G +++A L M + G D VT+ L L K +++ M LL+ +
Sbjct: 387 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 446
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+G P+ Y +L G+ +A++L + + + P+ +Y +IHGLC Q L+
Sbjct: 447 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 506
Query: 355 EDVDWVLKKMVQQGFVP 371
+ + +M + G P
Sbjct: 507 AEASKLFSEMNKNGCSP 523
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 135/294 (45%), Gaps = 2/294 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ PN Y +IN L + A +++ ++ + C+ + F +I ++++
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSME-QGNCQPNVVVFSTLIDSLCK-DRQVTE 228
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A +M + P++ T+N +++ L + + + + D LN ++
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G + A V+D + EPNV TY+ LM G C + V+ A + + M + A
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ +++N LI+G K V++ M L E M + PN+ +Y +++GL R +A L
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ P V+Y+ L LC + ++ +LK + + P + ++ I+
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 2/239 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ A L + P TF L+ L V K+ GE ++ G + +
Sbjct: 120 RVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI-GEALHLFDKMIGEGFQPNVVTY 178
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC+ GN AA +L + NC+PNV +STL+ LC+ V EAF + M +
Sbjct: 179 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMIT 238
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI + VT+N LI GL K + + L+ M P+ + V+ L + E
Sbjct: 239 KGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAE 298
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ++V MI + P+ V+Y L+ G C + V+ V MV + V + + ++
Sbjct: 299 AHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 357
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA+ +M P+ T+N +++ L + ++ G D
Sbjct: 366 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 425
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L LC+N +L+ A +L N +P+++ Y+T++ G+C G +E+A L + S+G
Sbjct: 426 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 485
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + T+NI+I GL KQG + E KL M GC PN +Y + G L
Sbjct: 486 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTI 545
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
EL+ M+ S + L+ L + L + V +L K VQ
Sbjct: 546 ELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKYVQ 588
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 4/200 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
R++ PN Y +I+ L R DAI + + ++ D Y + Y
Sbjct: 378 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI---PDLVTYRTLSDYLCKNR 434
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ KA+ L + N P ++ + +L+ + A + + ++++ + G++ + N
Sbjct: 435 HLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYN 494
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ GLC+ G L A + E K C PN TY+ + G LLE M +
Sbjct: 495 IMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554
Query: 263 GIDADTVTFNILISGLRKQG 282
G D T +L+ L G
Sbjct: 555 GFSVDVSTTTLLVGMLSDDG 574
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 7/231 (3%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A R+ + +ET D P V ++N +++ A ++ G D
Sbjct: 116 AMRVMEILETYGD-------PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVT 168
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI++ LC G LE AF V+DE K C+P+V TY+ L+ +G + EA L + +
Sbjct: 169 YNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELV 228
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S G+ D T+N +I G+ K+G + + + + +GC P+ SY +L L+K R+
Sbjct: 229 SRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWE 288
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + L+ M+ P+ V++ LI C + V + VL+ M ++G P
Sbjct: 289 DGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTP 339
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 151/321 (47%), Gaps = 20/321 (6%)
Query: 59 TEVLKIF---SNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
T+++K F NL+ + V+ +L Y +P+ Y +I+ ++A + D+ +
Sbjct: 101 TKLIKGFFNSRNLKKAMRVMEILETYG-----DPDVYSYNAMISGFSKANQIDSANQVFD 155
Query: 116 RIKVEKLCRFSDGFFYNVIK---IYGNMA--GRISKAIETLFDMPSYNCWPSVKTFNLVL 170
R++ S GF +V+ + G++ G++ A E + ++ C PSV T+ +++
Sbjct: 156 RMR-------SRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILI 208
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
+ E ++ G+ D N +++G+C+ G + A + + C
Sbjct: 209 EATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCN 268
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P+V +Y+ L+ K E+ L++ M G + + VT +ILIS ++G+V E + +
Sbjct: 269 PDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNV 328
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
LE MK KG P+S SY ++ + R A E + +M+ + P V+Y ++ LC
Sbjct: 329 LEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCK 388
Query: 351 QKLVEDVDWVLKKMVQQGFVP 371
+ V +K+ + G P
Sbjct: 389 FGCADLALDVFEKLDEVGCPP 409
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 141/324 (43%), Gaps = 37/324 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ + ++P+ Y ++I L + + ++M + ++ C+ S Y ++ + G
Sbjct: 158 RSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDEL-LKDGCKPS-VITYTILIEATILEG 215
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI++A+E ++ S P + T+N ++ + + + G D N
Sbjct: 216 RINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYN 275
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
ILL+ E ++ + CEPNV T+S L+ C +G V EA +LE M+ +
Sbjct: 276 ILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEK 335
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL--------- 313
G+ D+ +++ LIS K+G+++ ++ LE+M GC P+ +Y +L L
Sbjct: 336 GLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLA 395
Query: 314 ------LDKKRFP--------------------EAKELVGRMICERMSPSFVSYKKLIHG 347
LD+ P +A E++ MI + + P ++Y LI
Sbjct: 396 LDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISC 455
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVP 371
LC LV++ +L M F P
Sbjct: 456 LCRDGLVDEAIGLLVDMEATRFQP 479
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 2/241 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN ++++I+ + R ++++ +K + L D + Y+ + GR+ AI
Sbjct: 304 PNVVTHSILISSFCREGRVREAVNVLEVMKEKGLT--PDSYSYDPLISAFCKEGRLDLAI 361
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M S C P + +N +L L ++ ++G N + L
Sbjct: 362 EYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSAL 421
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
GN A ++ E ++ +P+ TY++L+ LC G V+EA GLL ME+
Sbjct: 422 WSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTV 481
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++FNI++ G+ K +V EG++LL M KGC PN SY ++ G+ EA EL
Sbjct: 482 ISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANS 541
Query: 329 M 329
+
Sbjct: 542 L 542
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
+LN A + E S G + D L+KG + NL+ A V+ E +
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM-EILETY 126
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
+P+V +Y+ ++ G + ++ A + +RM S G D VT+NI+I L +GK+E
Sbjct: 127 GDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
++++ + GC P+ +Y ++ + + R EA EL ++ + P +Y +I G+
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
Query: 349 CNQKLVEDVDWVLKKMVQQGFVP 371
C + + + ++ + +G P
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNP 269
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 100/219 (45%)
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
DM C P+V T +++++ E + + G+ D+ + L+ C+ G
Sbjct: 296 DMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEG 355
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
L+ A L++ C P++ Y+T++ LC+ G + A + E+++ G +N
Sbjct: 356 RLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYN 415
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
+ S L G + ++++ M KG P+ +Y ++ L EA L+ M
Sbjct: 416 TMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEAT 475
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
R P+ +S+ ++ G+C V + +L MV++G +P
Sbjct: 476 RFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLP 514
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 94/193 (48%), Gaps = 2/193 (1%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL C G + Y L+ + +P+V + L+ G N+++A ++E +E+ G
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D D ++N +ISG K +++ ++ +RM+ +G P+ +Y ++ L + + A
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GC 382
E++ ++ + PS ++Y LI + + + + ++V +G P + + I+ G
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
Query: 383 VTFGKDNRNRVYV 395
G ++R +V
Sbjct: 247 CKEGMEDRALDFV 259
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 100/223 (44%), Gaps = 6/223 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
+R+ ++V+ V+ K K P+ Y +I+ + R D + ++++ V C D
Sbjct: 322 VREAVNVLEVM----KEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKM-VSDGC-LPD 375
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
YN I G A++ + C P+V+ +N + + L S + + +
Sbjct: 376 IVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMIS 435
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ G++ D N L+ LC +G ++ A +L + +P V +++ ++ G+C+
Sbjct: 436 EMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAH 495
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
V E LL M +G + ++ +LI G+ G E M+L
Sbjct: 496 RVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMEL 538
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 145/330 (43%), Gaps = 37/330 (11%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQR--------------IKVEKLCRFSDGFFYN 132
+ P+E Y ++N+L ++ D+ ++ I ++ LC+ DG F +
Sbjct: 235 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK--DGSFDD 292
Query: 133 VIKIYGNMA---------------------GRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+ ++ M G+ + L +M N P V TF+ +++
Sbjct: 293 ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 352
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
+ V E + +Y G+ D N L+ G C+ L A + D + CEP
Sbjct: 353 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 412
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
++ TYS L++ C+ V++ L + S+G+ +T+T+N L+ G + GK+ +L
Sbjct: 413 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 472
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ M +G P+ +Y +L GL D +A E+ +M RM+ Y +IHG+CN
Sbjct: 473 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 532
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
V+D + + +G P + + ++G
Sbjct: 533 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 562
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 116/232 (50%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ GR+S+A+ + M P + T + ++N L E + + G + D
Sbjct: 181 LEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEV 240
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+L LC++GN A + + ++N + +V YS ++ LC+ G+ ++A L M
Sbjct: 241 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 300
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E +GI AD VT++ LI GL GK ++G K+L M G+ P+ ++ ++ + + +
Sbjct: 301 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 360
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EAKEL MI ++P ++Y LI G C + + + + + MV +G P
Sbjct: 361 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 412
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 37/269 (13%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+ Y+++IN +AKR D + + I + L + YN + + +G++
Sbjct: 408 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL--IPNTITYNTLVLGFCQSGKL 465
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ A E +M S PSV T+ IL
Sbjct: 466 NAAKELFQEMVSRGVPPSVVTYG-----------------------------------IL 490
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GLC+NG L A + ++ K + Y+ ++HG+C V++A+ L + +G+
Sbjct: 491 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 550
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VT+N++I GL K+G + E L +MK GC P+ +Y ++ L + E
Sbjct: 551 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE 610
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKL 353
L+ M S + K +I L +++L
Sbjct: 611 LIEEMKVCGFSADSSTIKMVIDMLSDRRL 639
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+++ AI+ M P+ FN + + + K Y + G G+E D +
Sbjct: 79 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ C L AF VL K EP+ T+STL++G C +G V EA L++RM
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
D VT + LI+GL +G+V E + L++RM G P+ +Y VL L A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+L +M + S V Y +I LC +D + +M +G + + ++G
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 317
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%)
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
A KLG E D + L+ G C G + A ++D + P++ T STL++GLC KG
Sbjct: 160 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 219
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V EA L++RM G D VT+ +++ L K G + L +M+ + + Y
Sbjct: 220 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 279
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
V+ L F +A L M + + V+Y LI GLCN +D +L++M+ +
Sbjct: 280 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 339
Query: 369 FVPRMGMWREIV 380
+P + + ++
Sbjct: 340 IIPDVVTFSALI 351
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 3/221 (1%)
Query: 151 LFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+FD M S C P + T+++++N AK + ++ + G+ + N L+ G C
Sbjct: 401 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 460
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
++G L AA + E + P+V TY L+ GLC+ G + +A + E+M+ +
Sbjct: 461 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG 520
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+NI+I G+ KV++ L + KG P+ +Y ++ GL K EA L +M
Sbjct: 521 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 580
Query: 330 ICERMSPSFVSYKKLIHG-LCNQKLVEDVDWVLKKMVQQGF 369
+ +P +Y LI L L+ V+ ++++M GF
Sbjct: 581 KEDGCTPDDFTYNILIRAHLGGSGLISSVE-LIEEMKVCGF 620
>gi|242058297|ref|XP_002458294.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
gi|241930269|gb|EES03414.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
Length = 534
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 153/349 (43%), Gaps = 31/349 (8%)
Query: 69 RDPISVISVLNQYSKRK-----DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC 123
RDP +++ + + P+ A +L+ ++LA A ++ R
Sbjct: 28 RDPRRALAIFDAATAASTSAPDPITPSPATVSLLTSRLASAGHLPLATSLLSR------- 80
Query: 124 RFSDGFFYNVIKIYGNMAG---------RISKAIETLFDMPSYNCWP-SVKTFNLVLNLL 173
S G F +V + G R A+ PS P S +++N VL L
Sbjct: 81 --SRGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPSDLALPHSARSYNAVLAAL 138
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG--NLEAAFYVLDEFPKQNCEP 231
V+ + + G A N+LLK C + +++ A + PK P
Sbjct: 139 VAHSHLPLARSLLADMRAAGFAPTAATYNVLLKAQCSDAAADIKDALRLFRNIPK----P 194
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+V +Y+T++ GLC +G + A + M + I VT+ LI L ++G ++ +K+
Sbjct: 195 DVCSYNTIIDGLCRRGRLAAALEMFSEMVGKCIAPTVVTYTTLIHWLAREGCFDDALKIF 254
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ M +G PN +Y ++ GL R A EL+ RMI E+ P+ ++Y +I GLC +
Sbjct: 255 DEMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDRMIKEKKLPNTITYSSVIDGLCKE 314
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMW-REIVGCVTFGKDNRNRVYVTETV 399
++ + VL +M QG P G++ + IVG G+ Y+ E +
Sbjct: 315 HMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMI 363
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 10/230 (4%)
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI---DACCLNILLKG 207
L DM + P+ T+N++L S + A +L I D C N ++ G
Sbjct: 151 LADMRAAGFAPTAATYNVLLKAQCS-----DAAADIKDALRLFRNIPKPDVCSYNTIIDG 205
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC G L AA + E + P V TY+TL+H L +G ++A + + M G+ +
Sbjct: 206 LCRRGRLAAALEMFSEMVGKCIAPTVVTYTTLIHWLAREGCFDDALKIFDEMGRRGVSPN 265
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT++ LI GL K G+ ++L++RM + PN+ +Y V+ GL + EA E++
Sbjct: 266 LVTYSSLIDGLCKGGRAASALELMDRMIKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLD 325
Query: 328 RMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQQGFVPRMGMW 376
RM + P + KLI GLC+ + VE ++ L +M+ G P W
Sbjct: 326 RMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANY-LDEMILAGIEPNRVTW 374
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 129/301 (42%), Gaps = 11/301 (3%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P A Y N L +A+ DA DI +++ + D YN I GR++
Sbjct: 159 FAPTAATY----NVLLKAQCSDAAADIKDALRLFRNIPKPDVCSYNTIIDGLCRRGRLAA 214
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+E +M P+V T+ +++ L + + I+ + GV + + L+
Sbjct: 215 ALEMFSEMVGKCIAPTVVTYTTLIHWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLID 274
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ G +A ++D K+ PN TYS+++ GLC++ + EA +L+RM +G
Sbjct: 275 GLCKGGRAASALELMDRMIKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKP 334
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ-------EVLYGLLDKKRF 319
D F LI GL G+ E L+ M G PN ++ VL L K
Sbjct: 335 DAGLFGKLIVGLCDAGRAVEAANYLDEMILAGIEPNRVTWSLHTRINNTVLTALCAKGEL 394
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A ++ +S ++ L+ +K +E V+ M+ + +P W I
Sbjct: 395 GRAFQVYQSTRTRSISTDPTTFHLLVESFSKKKNMEKAAHVVLDMLSERCIPERETWDVI 454
Query: 380 V 380
+
Sbjct: 455 I 455
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 17/241 (7%)
Query: 89 PNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
P YT +I+ LA+ FD I D M R V + K GR +
Sbjct: 229 PTVVTYTTLIHWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCK-----GGRAA 283
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A+E + M P+ T++ V++ L + E + G + DA L+
Sbjct: 284 SALELMDRMIKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLI 343
Query: 206 KGLCENGN-LEAAFYVLDEFPKQNCEPNVRTYS-------TLMHGLCEKGNVEEAFGLLE 257
GLC+ G +EAA Y LDE EPN T+S T++ LC KG + AF + +
Sbjct: 344 VGLCDAGRAVEAANY-LDEMILAGIEPNRVTWSLHTRINNTVLTALCAKGELGRAFQVYQ 402
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+ I D TF++L+ K+ +E+ ++ M + C P ++ ++ G KK
Sbjct: 403 STRTRSISTDPTTFHLLVESFSKKKNMEKAAHVVLDMLSERCIPERETWDVIISGYWSKK 462
Query: 318 R 318
+
Sbjct: 463 K 463
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 15/289 (5%)
Query: 107 FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG---RI---SKAIETLFDMPSYNCW 160
DA+ K L R + F + Y +A R+ S+A++ L M
Sbjct: 172 LDALSKSRHAGKAASLVRALEQRFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIA 231
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI-----LLKGLCENGNLE 215
P+ T+N++L A + K G + ++C ++ ++ GL G LE
Sbjct: 232 PTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLE 291
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A V DE K+ C P+V TY+ L+ +C+KGNVE+A + + M +G + VT+ +LI
Sbjct: 292 KARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNVVTYTVLI 351
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI-CERM 334
GL GK++ G+KLLERMK GC P +Y ++ L ++ + +L +M E
Sbjct: 352 RGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGEEC 411
Query: 335 SPSFVSYKKLIHGLCNQKLVEDV---DWVLKKMVQQGFVPRMGMWREIV 380
P+ +Y +I + +K ED+ ++++MV +G++PR M+ ++
Sbjct: 412 LPNQDTYNIIISAMFMRKRAEDMVLAARMVEEMVDRGYLPRRFMFNRVL 460
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 49/277 (17%)
Query: 89 PNEALYTLIINKLAQAKR----FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
P + Y +I+ +A + +D + +R ++ C+ D Y + +AG++
Sbjct: 232 PTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCK-PDVVSYTTMVHGLGVAGQL 290
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA + +M C PSV T+ N L
Sbjct: 291 EKARKVFDEMAKEGCAPSVATY-----------------------------------NAL 315
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++ +C+ GN+E A V D + PNV TY+ L+ GLC G ++ LLERM++ G
Sbjct: 316 IQVICKKGNVEDAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGC 375
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ T+N+LI L ++G++E+G+ L E+M KG+ C PN +Y ++ + +KR E
Sbjct: 376 EPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKR-AEDM 434
Query: 324 ELVGRMICERMS----PSFVSYKKLIHGLC---NQKL 353
L RM+ E + P + ++++GL NQ+L
Sbjct: 435 VLAARMVEEMVDRGYLPRRFMFNRVLNGLMLTGNQEL 471
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
V D N LL L ++ + A ++ +Q P+V TY+TL G C + A
Sbjct: 161 VAQDLPLFNSLLDALSKSRHAGKAASLVRAL-EQRFTPDVVTYNTLADGWCRVKDTSRAL 219
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG-----CYPNSASYQE 308
+L M GI T+NI++ G + G++ +MK +G C P+ SY
Sbjct: 220 DVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTT 279
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+++GL + +A+++ M E +PS +Y LI +C + VED V M +G
Sbjct: 280 MVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKG 339
Query: 369 FVPRMGMWREIV-GCVTFGKDNRN 391
+VP + + ++ G GK +R
Sbjct: 340 YVPNVVTYTVLIRGLCHAGKIDRG 363
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 6/221 (2%)
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
S+ + FN +L+ L ++ G+ + A + D N L G C +
Sbjct: 158 SHRVAQDLPLFNSLLDALSKSRHAGKAASL-VRALEQRFTPDVVTYNTLADGWCRVKDTS 216
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-----IDADTVT 270
A VL + P TY+ ++ G G + A+ +M+ G D V+
Sbjct: 217 RALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVS 276
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ ++ GL G++E+ K+ + M +GC P+ A+Y ++ + K +A + M
Sbjct: 277 YTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMR 336
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P+ V+Y LI GLC+ ++ +L++M G P
Sbjct: 337 VKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEP 377
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 2/282 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +T ++ +A+ +FD + + K+E L D + + ++ R S A+
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFH--KMENLGISHDLYSFTILIHCFCRCSRFSLAL 670
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M PS+ T +LN + E + S A+LG+E + N ++ GL
Sbjct: 671 ALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGL 730
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+N +L A + K+ + TY+TL+ GLC G +A LL M ID +
Sbjct: 731 CKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNV 790
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ F LI K+G + E L + M + +PN +Y ++ G + R +AK +
Sbjct: 791 IFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDL 850
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
M+ + P V+Y LI G C K VED + +M QG V
Sbjct: 851 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLV 892
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 12/295 (4%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-----RISKAI 148
+T++I+ + RF ++ K+ KL GF +++ + + G R +A+
Sbjct: 653 FTILIHCFCRCSRFSLALALLG--KMMKL-----GFQPSIVTLGSLLNGFCQGNRFQEAV 705
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M P+V +N V+N L + I+ K G+ DA N L+ GL
Sbjct: 706 SLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGL 765
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +G A +L + K+ +PNV ++ L+ ++GN+ EA L + M + +
Sbjct: 766 CNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNI 825
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+N LI+G QG++ + + + M KGC+P+ +Y ++ G KR + +L
Sbjct: 826 LTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 885
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
M + + +Y LIHG C + V +MV G P + + ++ C+
Sbjct: 886 MTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCL 940
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 3/289 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAG 142
+ Y PN +Y +I+ L + + +++ ++EK R + D YN + +G
Sbjct: 163 KSGYEPNVVVYNTLIDCLCKNGDVNIALELLN--EMEKKGRLAADLVTYNTLLTGLCYSG 220
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+A L DM P V TF +++ V E Q +Y + + + N
Sbjct: 221 EWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYN 280
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC +G L A D + C PNV TY+TL++G C+ VE+ L +RM E
Sbjct: 281 SLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYRE 340
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ DT T+N LI G + GK+ + M G P+ ++ +L+GL A
Sbjct: 341 GLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSA 400
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M V+Y +IHGLC VE+ + ++ +G P
Sbjct: 401 MVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKP 449
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 126/280 (45%), Gaps = 2/280 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +Y +IN L + + + +I +EK +D YN + +GR + A
Sbjct: 718 PNVVIYNTVINGLCKNRDLNNALEIFY--GMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L DM P+V F +++ V E + +Y + V + N L+ G
Sbjct: 776 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGF 835
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G L A ++ D + C P+V TY+TL+ G C+ VE+ L M +G+ D
Sbjct: 836 CIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDA 895
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N LI G + GK+ K+ RM G P+ +Y +L L + + +A +V
Sbjct: 896 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVED 955
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ +M ++Y +I G+C V++ + + + ++G
Sbjct: 956 LQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKG 995
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
+F ++++ + + KLG + L LL G C+ + A ++D
Sbjct: 652 SFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 711
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ EPNV Y+T+++GLC+ ++ A + ME +GI AD VT+N LISGL G+
Sbjct: 712 AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRW 771
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ +LL M + PN + ++ + + EAK L MI + P+ ++Y L
Sbjct: 772 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSL 831
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
I+G C Q + D + MV +G P + + ++
Sbjct: 832 INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLI 867
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 109/236 (46%), Gaps = 13/236 (5%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLL-------VSAKLYGEIQGIYTSAAKLGVE 195
RI A + M P+V +N +++ L ++ +L E++ AA
Sbjct: 150 RIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAA----- 204
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D N LL GLC +G A +L + K+ P+V T++ L+ ++GN++EA L
Sbjct: 205 -DLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQEL 263
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
++M I +TVT+N LI+GL G++ K + M KGC+PN +Y ++ G
Sbjct: 264 YKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCK 323
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+R + +L RM E + +Y LIHG C + + MV G P
Sbjct: 324 SRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTP 379
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 6/264 (2%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R A++ +M PSV F +L + + + Y + G+ D
Sbjct: 45 RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C L A +L + K +P++ T+ +L+HG C + + +AF L+ M
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG-CYPNSASYQEVLYGLLDKKRFPE 321
G + + V +N LI L K G V ++LL M+ KG + +Y +L GL + +
Sbjct: 165 GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQ 224
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A ++ M R++P ++ LI Q +++ + K+M+Q P + ++
Sbjct: 225 AARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLIN 284
Query: 382 CVTFGKDNRNRVY-VTETVDSLAS 404
G R+Y +T D +AS
Sbjct: 285 ----GLCMHGRLYHAKKTFDLMAS 304
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 1/191 (0%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
KLG + LL G C + AF ++ K EPNV Y+TL+ LC+ G+V
Sbjct: 128 KLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVN 187
Query: 251 EAFGLLERMESEG-IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
A LL ME +G + AD VT+N L++GL G+ + ++L M + P+ ++ +
Sbjct: 188 IALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTAL 247
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ + + EA+EL +M+ + P+ V+Y LI+GLC + M +G
Sbjct: 248 IDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGC 307
Query: 370 VPRMGMWREIV 380
P + + ++
Sbjct: 308 FPNVVTYNTLI 318
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 3/253 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+L +KR+ NP+ +T +I+ + D +++ +++ + + YN +
Sbjct: 228 ILRDMTKRR-INPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIG--PNTVTYNSLIN 284
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
M GR+ A +T M S C+P+V T+N ++N ++ + ++ + G+
Sbjct: 285 GLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVG 344
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ G C+ G L A + P++ T+ L+HGLC G + A
Sbjct: 345 DTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKF 404
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M S V +NI+I GL K KVEE +L R+ +G P++ +Y ++ GL
Sbjct: 405 NDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKN 464
Query: 317 KRFPEAKELVGRM 329
EA EL RM
Sbjct: 465 GPRREADELFRRM 477
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 4/228 (1%)
Query: 84 RKDYNPNEALYTLIINKLA-QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
R+ +PN Y +IN Q + DA M + V K C F D YN + +
Sbjct: 818 RRSVHPNILTYNSLINGFCIQGRLGDAKH--MFDLMVSKGC-FPDVVTYNTLITGFCKSK 874
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ ++ +M T+N +++ A Q ++ GV D N
Sbjct: 875 RVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYN 934
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
ILL LC NG +E A ++++ K + ++ TY+ ++ G+C V+EA+ L + +
Sbjct: 935 ILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRK 994
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
G+ D + + +ISGL + G E KL RMK G P+ Y E L
Sbjct: 995 GVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETL 1042
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 134/358 (37%), Gaps = 71/358 (19%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN-MAGRISKA 147
PN Y +IN +++R + + QR+ E L D F YN + I+G G++ A
Sbjct: 309 PNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL--VGDTFTYNTL-IHGYCQVGKLRVA 365
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ M S P + T ++L+ L G + + NI++ G
Sbjct: 366 KDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHG 425
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID-- 265
LC+ +E A+ + P + +P+ RTY+ ++ GLC+ G EA L RM+ +GI
Sbjct: 426 LCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQ 485
Query: 266 ----------------------------------------ADTVTFNILI------SGLR 279
+DT ++ L+ S
Sbjct: 486 AEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSS 545
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSAS---------------YQEVLYGLLDKKRFPEAKE 324
+G V + LLER G P S S Y+E L L +F +A
Sbjct: 546 VKGFVRRHLLLLER----GNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFG 601
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L M+ R PS V + +++ + + V ++ KM G + + ++ C
Sbjct: 602 LFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHC 659
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%)
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ AF + E + P++ ++ ++ + + + L +ME+ GI D +F I
Sbjct: 596 FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTI 655
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI + + + LL +M G P+ + +L G RF EA LV M
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ P+ V Y +I+GLC + + + + M ++G V
Sbjct: 716 LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIV 752
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G + E A + E + P+V ++ L+ + E ++ME G
Sbjct: 36 LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +F ILI + ++ + +L +M G P+ ++ +L+G + R +A
Sbjct: 96 ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
LV M+ P+ V Y LI LC V +L +M ++G
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKG 200
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Query: 224 FPKQNCEPNVRTYS----TLMHGLCEKGNVEEAFGL-LERMESEGIDADTVTFNILISGL 278
+P + R YS L G E+A L LE ++S+ + + V F L++ +
Sbjct: 17 YPSSGGGASARAYSGYREKLRTGFLHSIRFEDALDLFLEMVQSQPLPS-VVDFTRLLTAI 75
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
+ E + ++M+ G + S+ +++ R A ++G+M+ PS
Sbjct: 76 ANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSI 135
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
V++ L+HG C + + D ++ MV+ G+ P + ++ ++ C+
Sbjct: 136 VTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCL 180
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 250 EEAFGLL-ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
++AFGL E ++S I + V F +++ + K K + + L +M+ G + S+
Sbjct: 597 DDAFGLFCEMLQSRPIPS-IVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTI 655
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+++ RF A L+G+M+ PS V+ L++G C ++ ++ M + G
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715
Query: 369 FVPRMGMWREIVGCVTFGKDNRN 391
P + ++ ++ + +D N
Sbjct: 716 LEPNVVIYNTVINGLCKNRDLNN 738
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 120/228 (52%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + C P+V T+N++++ + + + + S G + + N +LKGLC
Sbjct: 7 MRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIER 66
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
A +LDE ++NC PN T + +++ L KG +++ LE+M G A+ VT+N
Sbjct: 67 WVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNA 126
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+ISG+ +QG V+ ++LL M+ GC P+ +Y +L GL ++ +A+EL+ +M
Sbjct: 127 VISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQND 186
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
P V++ +I LC + L+ V K+M ++G P + I+G
Sbjct: 187 CLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIG 234
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 133/265 (50%), Gaps = 3/265 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R++ PNEA +I+N L++ + ++ K+ K ++ YN + G
Sbjct: 79 RENCPPNEATVNVIVNTLSRKGLLQKVTRYLE--KMSKHGCTANVVTYNAVISGMCEQGH 136
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+E L +M S+ C P + T+N +L L SA + + + + ++ D N
Sbjct: 137 VDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNT 196
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ LC+ G + AF V + P++ C PN TYST++ GL + G +E+A LL M S+G
Sbjct: 197 IISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKG 256
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D + + +L L K+ K+EE ++++ +++ G P + + VL L + A
Sbjct: 257 YNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAI 315
Query: 324 ELVGRMICERMSPSFVSYKKLIHGL 348
+++ M+ P ++Y LI GL
Sbjct: 316 DVLADMVSYGCMPDELTYIILIEGL 340
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 140/317 (44%), Gaps = 36/317 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +II+ + + D +++ + + C+ + + V+K ++ R A
Sbjct: 14 PNVVTYNVIIDAMCREGDVDQARELLNSLP-SRGCKPNTVNYNTVLKGLCSIE-RWVDAE 71
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M NC P+ T N+++N L L ++ +K G + N ++ G+
Sbjct: 72 ELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGM 131
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
CE G++++A +L C+P++ TY+TL+ GLC E+A L+ +M D
Sbjct: 132 CEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDN 191
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VTFN +IS L ++G + + ++ ++M KGC PNS +Y ++ GL + +A EL+
Sbjct: 192 VTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNE 251
Query: 329 MICER----------------------------------MSPSFVSYKKLIHGLCNQKLV 354
M + +SP V + ++ LC
Sbjct: 252 MASKGYNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKT 311
Query: 355 EDVDWVLKKMVQQGFVP 371
+ VL MV G +P
Sbjct: 312 DYAIDVLADMVSYGCMP 328
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 35/196 (17%)
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV---------- 269
++D + CEPNV TY+ ++ +C +G+V++A LL + S G +TV
Sbjct: 3 LIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLC 62
Query: 270 -------------------------TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
T N++++ L ++G +++ + LE+M GC N
Sbjct: 63 SIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVV 122
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y V+ G+ ++ A EL+ M P V+Y L+ GLC+ ED + ++ KM
Sbjct: 123 TYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKM 182
Query: 365 VQQGFVPRMGMWREIV 380
Q +P + I+
Sbjct: 183 SQNDCLPDNVTFNTII 198
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 5/228 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L A +++ E++M IK+ + D +N I + G I +A
Sbjct: 154 PDIVTYNTLLKGLCSADQWEDAEELM--IKMSQNDCLPDNVTFNTIISFLCQKGLILQAF 211
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E MP C P+ T++ ++ L A + + A G D +L + L
Sbjct: 212 EVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTDKM-YQLLTESL 270
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ +E V+ + P ++T++ LC G + A +L M S G D
Sbjct: 271 NKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDE 330
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+T+ ILI GL +G ++E +L+ R+ + NS E L LLD+
Sbjct: 331 LTYIILIEGLSYEGYLQEARELVSRLCSRDVLSNSLIKNEAL--LLDQ 376
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 51/97 (52%)
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
M+L++ M+ +GC PN +Y ++ + + +A+EL+ + P+ V+Y ++ G
Sbjct: 1 MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
LC+ + D + +L +MV++ P IV ++
Sbjct: 61 LCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLS 97
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 150/317 (47%), Gaps = 4/317 (1%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
+ S + + + F N P SVL+ +KR + N L++ ++ + D +
Sbjct: 77 FTSLSALTESFVNTHHPSFAFSVLSLMTKR-GFGVNVYNLNLVLKGFCRSGQCDKAMSLF 135
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM--PSYNCWPSVKTFNLVLNL 172
++K C D YN + A R+++A LF+ +C P++ T++++++
Sbjct: 136 SQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEA-RVLFEAMKKGGDCRPNLVTYSVLIDC 194
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
+ GE G+ + G++ D + L+ C G++E + DE ++ PN
Sbjct: 195 YCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPN 254
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
V TYS LM GL G EA +L+ M + G+ D V + +L GL K G+ + +K+L+
Sbjct: 255 VVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLD 314
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M KG P + +Y V+ GL + R +A +V M+ + P V+Y L+ GLC
Sbjct: 315 LMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAG 374
Query: 353 LVEDVDWVLKKMVQQGF 369
+ + + K ++ + F
Sbjct: 375 KIHEAMDLWKLLLSEKF 391
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 131/287 (45%), Gaps = 7/287 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQR-IKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+E + +I+ L +A+++DA+ + + + L RF+ + + + N S A
Sbjct: 40 PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTS--LSALTESFVN-THHPSFA 96
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK--LGVEIDACCLNILL 205
L M +V NLVL + + +++ + V D N L+
Sbjct: 97 FSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLV 156
Query: 206 KGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
G C+ L A + + K +C PN+ TYS L+ C+ G V E GLLE ME EG+
Sbjct: 157 NGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGL 216
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
AD ++ LIS +G +E G +L + M + PN +Y ++ GL R+ EA E
Sbjct: 217 KADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASE 276
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ M + P V+Y L GLC D VL MVQ+G P
Sbjct: 277 MLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEP 323
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 136/304 (44%), Gaps = 8/304 (2%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
D I V+ ++ Q K P Y +++N L + R D +++ + K + D
Sbjct: 308 DAIKVLDLMVQ----KGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMV--KKGKKPDAV 361
Query: 130 FYNVIKIYGNMAGRISKAIE--TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
YN + AG+I +A++ L ++ P V T N ++ L + I++
Sbjct: 362 TYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHS 421
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
S ++G++ + N L++G L A + + PN TYS +++GLC+
Sbjct: 422 SMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQ 481
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+ A GL +M+ GI + +N L++ L ++ +E+ L + M+ + S+
Sbjct: 482 MLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFN 541
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G L AKEL+ M + P V++ LI+ ++++ + +KMV
Sbjct: 542 IIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSC 601
Query: 368 GFVP 371
G VP
Sbjct: 602 GHVP 605
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 129/305 (42%), Gaps = 10/305 (3%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K P+ Y ++ L A + D+ + + EK D F N + GR
Sbjct: 353 KKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGR 412
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A M ++ T+N ++ ++A+ E ++ A + G ++ ++
Sbjct: 413 VHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSV 472
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ GLC+ L A + + P V Y+ LM LC + ++E+A L + M +
Sbjct: 473 MINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVN 532
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL-----YGLLDKKR 318
+ D V+FNI+I G K G V+ +LL M P++ ++ ++ G+LD
Sbjct: 533 HNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLD--- 589
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
EA L +M+ P V + L+ G + E + +L +M + V +
Sbjct: 590 --EAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTST 647
Query: 379 IVGCV 383
I+ C+
Sbjct: 648 ILACL 652
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 98/239 (41%), Gaps = 37/239 (15%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
+Y+ ++PN Y+++IN L + MQ + V + G F
Sbjct: 456 KYAVESGFSPNSMTYSVMINGLCK----------MQMLSVAR------GLFCK------- 492
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
M P+V +N ++ L + + ++ + +D
Sbjct: 493 --------------MKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVV 538
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NI++ G + G++++A +L E + P+ T+S L++ + G ++EA GL E+M
Sbjct: 539 SFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKM 598
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
S G V F+ L+ G +G+ E+ + LL +M K +S +L L R
Sbjct: 599 VSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSR 657
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 152/327 (46%), Gaps = 15/327 (4%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
VLK+ + +L + +RK + Y++II+ L + D ++ ++++
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERK-IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 121 KLCRFSDGFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
GF ++I IY + AGR + L DM P V F+ +++ V
Sbjct: 277 -------GFKADII-IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFV 328
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E + ++ + G+ D L+ G C+ L+ A ++LD + C PN+R
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T++ L++G C+ +++ L +M G+ ADTVT+N LI G + GK+E +L + M
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+ P+ SY+ +L GL D +A E+ ++ +M Y +IHG+CN V
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIVG 381
+D + + +G P + + ++G
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ KA L M S C P+++TFN+++N A L + ++ + GV D N
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L++G CE G LE A + E + P++ +Y L+ GLC+ G E+A + E++E
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
++ D +NI+I G+ KV++ L + KG P+ +Y ++ GL K EA
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 323 KELVGRMICERMSPSFVSYKKLIHG 347
L +M + SP+ +Y LI
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRA 571
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 145/318 (45%), Gaps = 14/318 (4%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV--IK 135
L Q R P ++ + + +A+ K++D + D+ ++++++ G +N+ +
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK-------GIAHNLYTLS 111
Query: 136 IYGNMAGR---ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
I N R +S A + + P TF+ ++N L E + ++
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G + LN L+ GLC NG + A ++D + +PN TY ++ +C+ G A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LL +ME I D V ++I+I GL K G ++ L M+ KG + Y ++ G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
R+ + +L+ MI +++P V++ LI + + + + + K+M+Q+G P
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 373 MGMWREIVGCVTFGKDNR 390
+ ++ F K+N+
Sbjct: 352 TVTYTSLID--GFCKENQ 367
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 117/238 (49%), Gaps = 5/238 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN + ++IN +A D ++ +++ + + +D YN + G++
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV--VADTVTYNTLIQGFCELGKL 438
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A E +M S P + ++ ++L+ L + I+ K +E+D NI+
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G+C ++ A+ + P + +P+V+TY+ ++ GLC+KG++ EA L +ME +G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD---KKRF 319
+ T+NILI +G + KL+E +K G ++++ + V+ L D KK F
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616
>gi|242082341|ref|XP_002445939.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
gi|241942289|gb|EES15434.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
Length = 465
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 154/334 (46%), Gaps = 4/334 (1%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
VL + RDP + + + + N + + +LA A+R D +E+I+++ K
Sbjct: 102 VLVKIKHERDPERLYQLFRTNAHNRLLVENRFAFEDAVARLAGARRNDLVEEILEQHKAL 161
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
R +GF +I +YG AG S A+ T +M Y C + K+ N + +L+ A+++
Sbjct: 162 PQGR-REGFVVRIIGLYGK-AGMPSHALRTFQEMGMYGCPRTAKSLNATMKVLLRAQMFD 219
Query: 181 EIQGIYTSAA-KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
E ++ K GVE+D N ++K C+ G+L AA+ V+ +P+V TY+TL
Sbjct: 220 EALWLFEEGPEKYGVELDDISCNTVVKIYCDMGDLRAAYRVMQGMEGAGVQPDVVTYTTL 279
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
M + G E GL M G + T+N+ I L + + + +L+ +M G
Sbjct: 280 MAAFYKCGQREVGDGLWNLMRLRGCEPTLATYNVRIQFLINRERGWQANELVRKMYAVGI 339
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P+ +Y ++ G AK + G M P+ Y+ ++H LC ++ +
Sbjct: 340 KPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFDLAFR 399
Query: 360 VLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNR 392
K +++ + P + +++ G + KD R
Sbjct: 400 FCKDSMEKNWFPSVNTINQLLKGLMAISKDRNAR 433
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 144/292 (49%), Gaps = 21/292 (7%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEK----------LCRFSDGFFYN------VIKIYGNM 140
+I+ LA+ K+F +++++RI V + R D N ++ Y N
Sbjct: 81 MIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYAN- 139
Query: 141 AGRISK-AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
R+++ AI+ M + P + ++LN L A+L + +Y ++GV +
Sbjct: 140 -SRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIH 198
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N+L+ C++G++E A +L+E + P++ TY+TL+ C+KG EA G+ +RM
Sbjct: 199 IFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRM 258
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E G+ D VT+N LI G ++G++ E ++L + G PN +Y ++ G
Sbjct: 259 ERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGAT--PNHVTYTTLIDGYCRVNDL 316
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA L M E + P V+Y ++ LC + ++D + +L +M ++ P
Sbjct: 317 EEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEP 368
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 181/424 (42%), Gaps = 64/424 (15%)
Query: 10 NHRQSIIQSLSSASTITRKRTFA--------------LASPSA------SHQDSDHHAYK 49
NH S+ S + T+ + + F L+SPS H D D ++
Sbjct: 70 NHXHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQI 129
Query: 50 LNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDA 109
L+ WL + ++N R I V ++ + + P+ T+++N LA+A+ +
Sbjct: 130 LS---WL-----VIFYANSRMTQDAIQVF-EHMRVHGFKPHLHACTVLLNSLAKARLTNM 180
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLV 169
+ + + K+ ++ + +NV+ +G + KA + L +M S +P + T+N +
Sbjct: 181 VWKVYK--KMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTL 238
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG----------------- 212
++L ++ E GI + GV D N L+ G C G
Sbjct: 239 ISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATP 298
Query: 213 ----------------NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+LE A + + + P V TY++++ LCE+G +++A LL
Sbjct: 299 NHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLL 358
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M ++ D VT N LI+ K G + MK+ ++M G P+ +++ +++G
Sbjct: 359 NEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKL 418
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
AKE + M+ SPS+ +Y L+ +Q E V + ++ ++G + ++
Sbjct: 419 HEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVY 478
Query: 377 REIV 380
R ++
Sbjct: 479 RALI 482
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 99/255 (38%), Gaps = 2/255 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN YT +I+ + + + + ++VE L YN I G+I A
Sbjct: 297 TPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGL--HPGVVTYNSILRKLCEEGKIKDA 354
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L +M P T N ++N G + + G++ D L+ G
Sbjct: 355 NRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHG 414
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ +++A L E P+ TYS L+ ++ N E L + + +G+ D
Sbjct: 415 FCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVD 474
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+ LI L K K+E ++ M+GKG +S Y + Y + A +++
Sbjct: 475 ISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLD 534
Query: 328 RMICERMSPSFVSYK 342
M R+ + Y+
Sbjct: 535 EMDKRRLMITLKIYR 549
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 78/187 (41%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+N +L L + + ++ VE D N L+ C+ G++ +A V
Sbjct: 333 PGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 392
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ + +P+ T+ L+HG C+ V+ A L M G T++ L+
Sbjct: 393 KKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYD 452
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
Q E ++L + + KG + + + Y+ ++ L + A+ + M + M V
Sbjct: 453 QDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVV 512
Query: 341 YKKLIHG 347
Y L +
Sbjct: 513 YTSLAYA 519
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+ T M PS FN +L + K + + + G+ D L I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ LC ++ AF L + K +P+ T++TL+ GLC +G + EA L ++M EG
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+ LI+GL K G ++LL M+ C PN + ++ L ++ EA
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ MI + +SP+ V+Y LIHGLC + V ++ +MV +P + +V
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 141/299 (47%), Gaps = 14/299 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------ 140
+ P+ +T +I L + + ++ +GF NV+ YG +
Sbjct: 136 HQPDATTFTTLIRGLCVEGKIGEALHLFDKM-------IGEGFQPNVVT-YGTLINGLCK 187
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G S AI L M NC P+V F+ +++ L + E I++ G+ +
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ GLC+ + +++E P+V T +T++ LC++G V EA +++ M
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G++ + VT+N L+ G + +V+ +K+ + M K C N SY ++ G +
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+A L M + ++P+ V+Y LIHGLC+ ++D + +MV +G +P + +R +
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 426
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ P V T +V+N L KLG + DA L++GLC G
Sbjct: 96 MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A ++ D+ + +PNV TY TL++GLC+ GN A LL ME + V F+
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI L K +V E + M KG PN +Y +++GL + L+ M+ +
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P + ++ LC + +V + V+ M+ +G P + + ++
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 145/317 (45%), Gaps = 14/317 (4%)
Query: 64 IFSNLRDPI----SVISVLNQYSK--RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI 117
+FS L D + V N +S+ K +PN Y +I+ L + + + +M +
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
K+ D F N + G +++A + + M P+V T+N +++
Sbjct: 272 VDSKI--MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD---GHC 326
Query: 178 LYGEIQ---GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
L E+ ++ + + N L+ G C+ +++ A Y+ +E +Q PN
Sbjct: 327 LRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 386
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TY+TL+HGLC G +++A L M + G D VT+ L L K +++ M LL+ +
Sbjct: 387 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 446
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+G P+ Y +L G+ +A++L + + + P+ +Y +IHGLC Q L+
Sbjct: 447 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 506
Query: 355 EDVDWVLKKMVQQGFVP 371
+ + +M + G P
Sbjct: 507 AEASKLFSEMNKNGCSP 523
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 135/294 (45%), Gaps = 2/294 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ PN Y +IN L + A +++ ++ + C+ + F +I ++++
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSME-QGNCQPNVVVFSTLIDSLCK-DRQVTE 228
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A +M + P++ T+N +++ L + + + + D LN ++
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G + A V+D + EPNV TY+ LM G C + V+ A + + M + A
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ +++N LI+G K V++ M L E M + PN+ +Y +++GL R +A L
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ P V+Y+ L LC + ++ +LK + + P + ++ I+
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 2/239 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ A L + P TF L+ L V K+ GE ++ G + +
Sbjct: 120 RVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI-GEALHLFDKMIGEGFQPNVVTY 178
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC+ GN AA +L + NC+PNV +STL+ LC+ V EAF + M +
Sbjct: 179 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMIT 238
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI + VT+N LI GL K + + L+ M P+ + V+ L + E
Sbjct: 239 KGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAE 298
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ++V MI + P+ V+Y L+ G C + V+ V MV + V + + ++
Sbjct: 299 AHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 357
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA+ +M P+ T+N +++ L + ++ G D
Sbjct: 366 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 425
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L LC+N +L+ A +L N +P+++ Y+T++ G+C G +E+A L + S+G
Sbjct: 426 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 485
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + T+NI+I GL KQG + E KL M GC PN +Y + G L
Sbjct: 486 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTI 545
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
EL+ M+ S + L+ L + L + V +L K+V
Sbjct: 546 ELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKIV 587
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 4/200 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
R++ PN Y +I+ L R DAI + + ++ D Y + Y
Sbjct: 378 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI---PDLVTYRTLSDYLCKNR 434
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ KA+ L + N P ++ + +L+ + A + + ++++ + G++ + N
Sbjct: 435 HLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYN 494
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ GLC+ G L A + E K C PN TY+ + G LLE M +
Sbjct: 495 IMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554
Query: 263 GIDADTVTFNILISGLRKQG 282
G D T +L+ L G
Sbjct: 555 GFSVDVSTTTLLVGMLSDDG 574
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 159/336 (47%), Gaps = 40/336 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
PN +Y+ II+ L + + + + V+ + +D Y+ + IYG + G++ +A
Sbjct: 197 PNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS--ADVVTYSTL-IYGFCIEGKLKEA 253
Query: 148 IETLFDMPSYNCWPSVKTFNL----------------VLNLLVSAKLYGEI--------- 182
I L +M P+V T+N+ VL +++ A + ++
Sbjct: 254 IGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313
Query: 183 ----------QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
Q ++ + + +GV D IL+ G C+N ++ A + E ++N P
Sbjct: 314 YFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ TYS+L+ GLC+ G + + L++ M G A+ +T++ LI GL K G ++ + L
Sbjct: 374 IVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFN 433
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+MK +G PN+ ++ +L GL R +A+E+ ++ + + +Y +I G C Q
Sbjct: 434 KMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQG 493
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
L+E+ +L KM G +P + EI+ F KD
Sbjct: 494 LLEEALTMLSKMEDNGCIPDAVTF-EIIIIALFKKD 528
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + FN +L+ K Y + G++ D LNIL+ C G + F V
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K+ P+ T +TL+ GLC KG V++A +++ ++G + V++ LI+G+ K
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G +KLL+++ G+ PN Y ++ L + EA L M + +S V+
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI+G C + +++ +L +MV + P + + +V
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 146/326 (44%), Gaps = 25/326 (7%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ ++ F ++ SVL + KR Y P+ T+ +N L I+ +
Sbjct: 93 DLITLNILINCFCHMGQITFGFSVLAKILKR-GYPPD----TVTLNTL--------IKGL 139
Query: 114 MQRIKVEKLCRFSD-----GFFYNVIKIYGNMAGRISK------AIETLFDMPSYNCWPS 162
+ +V+K F D GF N + YG + + K AI+ L + P+
Sbjct: 140 CLKGQVKKALHFHDKLLAQGFQLNQVS-YGTLINGVCKIGDTRAAIKLLQKIDGRLTKPN 198
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
V ++ +++ L +L E G+++ G+ D + L+ G C G L+ A +L+
Sbjct: 199 VVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLN 258
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
E + PNV TY+ L+ LC++G V+EA +L M + D +T++ L+ G
Sbjct: 259 EMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVY 318
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+V++ + M G P+ +Y ++ G K EA L M + M P V+Y
Sbjct: 319 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQG 368
LI GLC + V ++ +M +G
Sbjct: 379 SLIDGLCKSGRIPYVWDLIDEMHDRG 404
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 137/298 (45%), Gaps = 10/298 (3%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRIS 145
+ P + I++ A+ K + + R++++ + D N+ I + +M G+I+
Sbjct: 55 HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQ--PDLITLNILINCFCHM-GQIT 111
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLN 202
L + P T N ++ L L G+++ KL G +++
Sbjct: 112 FGFSVLAKILKRGYPPDTVTLNTLIKGLC---LKGQVKKALHFHDKLLAQGFQLNQVSYG 168
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G+C+ G+ AA +L + + +PNV YST++ LC+ V EA+GL M +
Sbjct: 169 TLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVK 228
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI AD VT++ LI G +GK++E + LL M K PN +Y ++ L + + EA
Sbjct: 229 GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
K ++ M+ + P ++Y L+ G V+ V M G P + + ++
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 130/274 (47%), Gaps = 3/274 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I +LN+ K NPN Y ++++ L + + + ++ + K C D Y+ +
Sbjct: 254 IGLLNEMV-LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML--KACVKPDVITYSTL 310
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+ + KA M P V T+ +++N K+ E ++ + +
Sbjct: 311 MDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNM 370
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ L+ GLC++G + + ++DE + NV TYS+L+ GLC+ G+++ A
Sbjct: 371 VPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIA 430
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L +M+ +GI +T TF IL+ GL K G++++ ++ + + KG + N +Y ++ G
Sbjct: 431 LFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHC 490
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ EA ++ +M P V+++ +I L
Sbjct: 491 KQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIAL 524
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 7/202 (3%)
Query: 186 YTSAAKL-------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
Y++A L G++ D LNIL+ C G + F +L + K+ P+ T++T
Sbjct: 942 YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTT 1001
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L++GLC KG V +A +++ ++G + V++ LI+G+ K G +KLL ++ G+
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
P+ Y ++ L + +A L M + +S V+Y LI+G C +++
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121
Query: 359 WVLKKMVQQGFVPRMGMWREIV 380
+L KMV + P + + +V
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILV 1143
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 9/265 (3%)
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL- 192
I+I N S A+ + P + T N+++N G+I ++ AK+
Sbjct: 932 IRIPHNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHM---GQITFNFSILAKIL 988
Query: 193 --GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G D L+ GLC G + A + D+ Q + N +Y TL++G+C+ G+
Sbjct: 989 KRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTR 1048
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A LL +++ D V +N +I L K V + L M KG + +Y ++
Sbjct: 1049 AAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLI 1108
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ--KLVEDVDWVLKKMVQQG 368
YG + EA L+ +M+ + ++P+ +Y L+ LC + L+++ +L KM G
Sbjct: 1109 YGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNG 1168
Query: 369 FVPRMGMWREIVGCVTFGKDNRNRV 393
+ EI+ F KD ++V
Sbjct: 1169 -CKANAVTFEIIISALFEKDENDKV 1192
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 112/236 (47%), Gaps = 27/236 (11%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD-----GFF 130
S+L + KR Y+P+ +T +IN L + +V K F D GF
Sbjct: 982 SILAKILKR-GYHPDTITFTTLINGLCL------------KGQVNKALHFHDKLLAQGFQ 1028
Query: 131 YNVIKIYGNMAGRISK------AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
N + YG + + K AI+ L + P V +N +++ L +L + G
Sbjct: 1029 LNQVS-YGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYG 1087
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
++ G+ D N L+ G C G L+ A +L++ + PNVRTY+ L+ LC
Sbjct: 1088 LFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALC 1147
Query: 245 EKGN--VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++G ++E+ +L +ME G A+ VTF I+IS L ++ + ++ KLL M +G
Sbjct: 1148 KEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARG 1203
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 144/292 (49%), Gaps = 21/292 (7%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEK----------LCRFSDGFFYN------VIKIYGNM 140
+I+ LA+ K+F +++++RI V + R D N ++ Y N
Sbjct: 81 MIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYAN- 139
Query: 141 AGRISK-AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
R+++ AI+ M + P + ++LN L A+L + +Y ++GV +
Sbjct: 140 -SRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIH 198
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N+L+ C++G++E A +L+E + P++ TY+TL+ C+KG EA G+ +RM
Sbjct: 199 IFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRM 258
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E G+ D VT+N LI G ++G++ E ++L + G PN +Y ++ G
Sbjct: 259 ERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGAT--PNHVTYTTLIDGYCRVNDL 316
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA L M E + P V+Y ++ LC + ++D + +L +M ++ P
Sbjct: 317 EEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEP 368
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 182/424 (42%), Gaps = 64/424 (15%)
Query: 10 NHRQSIIQSLSSASTITRKRTFA--------------LASPSA------SHQDSDHHAYK 49
NH+ S+ S + T+ + + F L+SPS H D D ++
Sbjct: 70 NHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQI 129
Query: 50 LNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDA 109
L+ WL + ++N R I V ++ + + P+ T+++N LA+A+ +
Sbjct: 130 LS---WL-----VIFYANSRMTQDAIQVF-EHMRVHGFKPHLHACTVLLNSLAKARLTNM 180
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLV 169
+ + + K+ ++ + +NV+ +G + KA + L +M S +P + T+N +
Sbjct: 181 VWKVYK--KMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTL 238
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG----------------- 212
++L ++ E GI + GV D N L+ G C G
Sbjct: 239 ISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATP 298
Query: 213 ----------------NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+LE A + + + P V TY++++ LCE+G +++A LL
Sbjct: 299 NHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLL 358
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M ++ D VT N LI+ K G + MK+ ++M G P+ +++ +++G
Sbjct: 359 NEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKL 418
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
AKE + M+ SPS+ +Y L+ +Q E V + ++ ++G + ++
Sbjct: 419 HEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVY 478
Query: 377 REIV 380
R ++
Sbjct: 479 RALI 482
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 99/255 (38%), Gaps = 2/255 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN YT +I+ + + + + ++VE L YN I G+I A
Sbjct: 297 TPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGL--HPGVVTYNSILRKLCEEGKIKDA 354
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L +M P T N ++N G + + G++ D L+ G
Sbjct: 355 NRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHG 414
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ +++A L E P+ TYS L+ ++ N E L + + +G+ D
Sbjct: 415 FCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVD 474
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+ LI L K K+E ++ M+GKG +S Y + Y + A +++
Sbjct: 475 ISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLD 534
Query: 328 RMICERMSPSFVSYK 342
M R+ + Y+
Sbjct: 535 EMDKRRLMITLKIYR 549
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 78/187 (41%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+N +L L + + ++ VE D N L+ C+ G++ +A V
Sbjct: 333 PGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 392
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ + +P+ T+ L+HG C+ V+ A L M G T++ L+
Sbjct: 393 KKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYD 452
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
Q E ++L + + KG + + + Y+ ++ L + A+ + M + M V
Sbjct: 453 QDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVV 512
Query: 341 YKKLIHG 347
Y L +
Sbjct: 513 YTSLAYA 519
>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Glycine max]
Length = 589
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 143/307 (46%), Gaps = 10/307 (3%)
Query: 84 RKDYNPNEALYTLIINKLAQ----AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
RK P YT++I + + A+ + +ED+ + C + D YN + +
Sbjct: 263 RKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAM-----EGC-YPDIVTYNSLVNLTS 316
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G+ + ++ S+ P+ T+N +++ L++ + E+ I +
Sbjct: 317 KQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHV 376
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NILL GLC++G L+ A +NC P++ TY+TL+ GLC++G ++E LL +
Sbjct: 377 TYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLL 436
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
VT+NI+I GL + G +E +L + M KG P+ ++ + +G +
Sbjct: 437 VGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQL 496
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA EL+ M + +Y+ +I GLC QK V+ VL MV+ P ++ +
Sbjct: 497 EEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSAL 556
Query: 380 VGCVTFG 386
+ V G
Sbjct: 557 IKAVADG 563
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 89/175 (50%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N+++ GLC+NG L +A ++++ C P+ TY++++ L +KGN +A
Sbjct: 199 DTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFW 258
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+G +T+ +LI + K +++LE M +GCYP+ +Y ++ +
Sbjct: 259 RDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQ 318
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ + ++ ++ M P+ V+Y LIH L N ++VD +LK M + P
Sbjct: 319 GKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPP 373
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L+ LC G L A ++D +++ P+ + + L+ G KG V+EA L +M
Sbjct: 134 NEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTLNKMVM 193
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G DT+T+N++I GL K G++ + L+E M GC P++ +Y ++ L DK F +
Sbjct: 194 SGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQ 253
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A + + P ++Y LI +C VL+ M +G P + + +V
Sbjct: 254 AVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLV 312
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 117/275 (42%), Gaps = 1/275 (0%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN++ GR+ A++ + DM C P T+N ++ L + + +
Sbjct: 199 DTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFW 258
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G +L++ +C+ A VL++ + C P++ TY++L++ ++
Sbjct: 259 RDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQ 318
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G E+ ++ + S G+ + VT+N LI L G +E +L+ M P +Y
Sbjct: 319 GKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTY 378
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+L GL A M+ E SP ++Y L+ GLC + +++ +L +V
Sbjct: 379 NILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVG 438
Query: 367 QGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETVD 400
P + + ++ G G + E VD
Sbjct: 439 TSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVD 473
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 103/206 (50%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ T+N++LN L + L Y++ D N LL GLC+ G ++ +
Sbjct: 373 PTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQL 432
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L+ +C P + TY+ ++ GL G++E A L + M +GI D +T + L G +
Sbjct: 433 LNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCR 492
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
++EE +LL+ M K + +Y+ V+ GL +K+ A +++ M+ + +P
Sbjct: 493 ADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERI 552
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQ 366
Y LI + + ++++ + + + +++
Sbjct: 553 YSALIKAVADGGMLKEANDLHQTLIK 578
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 2/242 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I+ L +D ++DI++ + + YN++ +G + +AI
Sbjct: 338 PNAVTYNTLIHSLINHGYWDEVDDILKIMN--ETSSPPTHVTYNILLNGLCKSGLLDRAI 395
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M + NC P + T+N +L+ L E + NI++ GL
Sbjct: 396 SFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGL 455
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
G++E+A + DE + P+ T+S+L G C +EEA LL+ M +
Sbjct: 456 ARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKN 515
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ +I GL +Q KV+ +++L+ M C P+ Y ++ + D EA +L
Sbjct: 516 TAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLHQT 575
Query: 329 MI 330
+I
Sbjct: 576 LI 577
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E+ + D +T N ++ L +GK+ +L++ M K P+ S ++ G + K
Sbjct: 122 EAPFVQNDEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLV 181
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
EA + + +M+ P ++Y +I GLC N +L +D V + M G P +
Sbjct: 182 DEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLV-EDMSLSGCSPDAITYNS 240
Query: 379 IVGCVTFGKDNRNR 392
I+ C+ F K N N+
Sbjct: 241 IIRCL-FDKGNFNQ 253
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 118/241 (48%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ ++ KAI + M S P ++ ++N L G + G +
Sbjct: 110 SNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVT 169
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+KGLC +GNL + LD ++ PN TYS+L+ ++ V EA LL+ +
Sbjct: 170 YNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEII 229
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++G + V++N+L++GL K+G++EE ++L + + KG PN SY +L L + R+
Sbjct: 230 AKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWE 289
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA EL+ M SPS V+Y LI L +E V+ +M+ F P + I+
Sbjct: 290 EANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPII 349
Query: 381 G 381
Sbjct: 350 A 350
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 95/170 (55%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL LC++ ++ A V++ P+ +Y+ L++ LC++GNV A L+E+ME G
Sbjct: 103 LLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVEKMEDSG 162
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
A+TVT+N L+ GL G + + ++ L+R+ KG PN+ +Y +L ++ EA
Sbjct: 163 YPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAM 222
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
L+ +I + P+ VSY L+ GLC + +E+ + K + +GF P +
Sbjct: 223 RLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNV 272
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 19/262 (7%)
Query: 124 RFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
R SD FF+ + + +A + L+D+ N +K V+ +++S
Sbjct: 77 RISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSN---KMKKAIRVMEMMISC------- 126
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
G+ DA L+ LC+ GN+ A ++++ N TY+TL+ GL
Sbjct: 127 ---------GIIPDAASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGL 177
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C GN+ ++ L+R+ +G+ + T++ L+ K+ V E M+LL+ + KG PN
Sbjct: 178 CMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNL 237
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
SY +L GL + R EA L + + SP+ VSY L+ LC + E+ + +L +
Sbjct: 238 VSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAE 297
Query: 364 MVQQGFVPRMGMWREIVGCVTF 385
M + P + + ++G + F
Sbjct: 298 MNGRERSPSIVTYNILIGSLAF 319
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 3/295 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ A YT ++N L + +++ K+E ++ YN + M G ++K++
Sbjct: 130 PDAASYTFLVNHLCKRGNVGYAMQLVE--KMEDSGYPANTVTYNTLVKGLCMHGNLNKSL 187
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L + P+ T++ +L + E + G + + N+LL GL
Sbjct: 188 QFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGL 247
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G +E A + P + PNV +Y+ L+ LC +G EEA LL M
Sbjct: 248 CKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSI 307
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+NILI L GK+E+ +++++ M P + SY ++ L + + + +
Sbjct: 308 VTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQ 367
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
MI R SP+ ++ I LC + V++ +++ + + ++ +V C+
Sbjct: 368 MIFGRCSPNEGTFNA-IAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCL 421
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 15/252 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF-SDGFFYNVIKIYGNMAGR 143
++ +P+ Y ++I LA + IE +Q I + F YN I G+
Sbjct: 301 RERSPSIVTYNILIGSLAFHGK---IEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGK 357
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ + L M C P+ TFN + L G++Q ++ LG + ++ +
Sbjct: 358 VEAVVNCLDQMIFGRCSPNEGTFNAIAVLCYE----GKVQEAFSLIQSLGNKQNSSIHDY 413
Query: 204 ---LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
++ LC+ GN AF +L E K P+ TYS+L+ GLC +G + EA + + +E
Sbjct: 414 YKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLE 473
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ D FN LI G K + + +++ E M KG P+ +Y ++ G++ +
Sbjct: 474 EDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHE---- 529
Query: 321 EAKELVGRMICE 332
E KEL ++ E
Sbjct: 530 EEKELAAEVLRE 541
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 142/340 (41%), Gaps = 49/340 (14%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-YNVIKIYGNMAGR 143
K PN Y +++ L + R IE+ ++ K FS YN++ GR
Sbjct: 231 KGGQPNLVSYNVLLTGLCKEGR---IEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGR 287
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV---EIDACC 200
+A E L +M PS+ T+N+ L+ S +G+I+ ++ + + A
Sbjct: 288 WEEANELLAEMNGRERSPSIVTYNI---LIGSLAFHGKIEQALQVIDEMMMGPFKPTATS 344
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT------------------------- 235
N ++ LC+ G +EA LD+ C PN T
Sbjct: 345 YNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNAIAVLCYEGKVQEAFSLIQSLGN 404
Query: 236 ---------YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
Y ++ LC+KGN AF LL M G D+ T++ LI GL +G + E
Sbjct: 405 KQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYE 464
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
M++ + ++ P+ ++ ++ G R + E+ MI + +PS +Y L+
Sbjct: 465 AMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVE 524
Query: 347 GLCNQKLVEDVDWVLKKM-----VQQGFVPRMGMWREIVG 381
G+ +++ E VL+++ + Q V R+ M ++ G
Sbjct: 525 GIIHEEEKELAAEVLRELHLRQVMSQSTVERLIMQYDLEG 564
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 66 SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 125
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXML 185
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 305
Query: 381 -GCVTFG 386
GC G
Sbjct: 306 NGCCKEG 312
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 127/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + E + +
Sbjct: 124 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKS 182
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 183 XMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 242
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYT 302
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI G C + D + +L++M+
Sbjct: 303 TLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSV 362
Query: 368 GFVPRMGMWREIV 380
G P + I+
Sbjct: 363 GLKPDARTYTMII 375
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 110/211 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 191 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 250
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI+G K
Sbjct: 251 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCK 310
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ G + R +A++++ M+ + P +
Sbjct: 311 EGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDART 370
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C V +LK+M + G VP
Sbjct: 371 YTMIINEFCKXGDVWXGSKLLKEMQRDGHVP 401
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 10/229 (4%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 190 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL--VPNGVTFTTLIDGHCKNGRVDLA 247
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + + + G++ D L+ G
Sbjct: 248 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLING 307
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVR----TYSTLMHGLCEKGNVEEAFGLLERMESEG 263
C+ G+L++AF E K+ + N+R Y+ L+ G C++G +A +L M S G
Sbjct: 308 CCKEGDLDSAF----EHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVG 363
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ D T+ ++I+ K G V G KLL+ M+ G P+ +Y ++ G
Sbjct: 364 LKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 122/240 (50%), Gaps = 2/240 (0%)
Query: 131 YNVIKIYGN-MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+N++ I+G+ M R +AI L M Y C P T+N +L+ L E + +
Sbjct: 200 FNIL-IHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDM 258
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G+ + NIL+ G C G L+ A V++ + + P+ TY+ ++ G C++G +
Sbjct: 259 KNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRI 318
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EA L E ME+ + D VT+N LI+G + G EEG KL+E M+G+G PNS +Y +
Sbjct: 319 AEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVM 378
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ + K + E + V +M P V+Y LI C +++ ++ +M ++G
Sbjct: 379 VKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGL 438
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 3/233 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDA 198
GR +A + M P++ T N +LN LV I + ++T K+GV+I+
Sbjct: 138 GRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINT 197
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
NIL+ G C A VL + C P+ TY+T++ GLC+KG + EA LL
Sbjct: 198 NSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLD 257
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M+++G+ + TFNIL+ G + G ++E ++E M P++ +Y ++ G + R
Sbjct: 258 MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGR 317
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA L M ++SP V+Y LI+G E+ ++++M +G P
Sbjct: 318 IAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKP 370
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 127/256 (49%), Gaps = 1/256 (0%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN I GR+++A + L DM + +P+ TFN+++ E +
Sbjct: 231 DNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVI 290
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
++ V DA N+++ G C+ G + A + +E P+V TY+TL++G E
Sbjct: 291 ELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEH 350
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G+ EE F L+E ME G+ ++VT+N+++ K+GK++E K + +M+ GC P+ +Y
Sbjct: 351 GSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTY 410
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ + EA L+ M + + V+ ++ LC ++ +++ +L +
Sbjct: 411 NTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARR 470
Query: 367 QG-FVPRMGMWREIVG 381
+G FV + I+G
Sbjct: 471 RGYFVDEVSYGTLIIG 486
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 137/315 (43%), Gaps = 37/315 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ + + D ++ +++++ E C D YN + + G++ +A
Sbjct: 370 PNSVTYNVMVKWFVKKGKMDEVDKTVRKME-ESGC-LPDIVTYNTLISWHCKVGKMDEAF 427
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC--------- 199
+ +M T N +L L + E + SA + G +D
Sbjct: 428 RLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGY 487
Query: 200 --------------------------CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
N ++ GLC+ G A LDE + P+
Sbjct: 488 FKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDE 547
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY+T++HG C++G VE+AF +M + D VT N L+ GL K+G +E+ +KL
Sbjct: 548 ITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNT 607
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
KG ++ SY ++ L +KRF EA +L+ M +++ P +Y ++ GL +
Sbjct: 608 WISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGR 667
Query: 354 VEDVDWVLKKMVQQG 368
++D + + K+ ++G
Sbjct: 668 MKDAEEFISKIAEKG 682
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 131/296 (44%), Gaps = 25/296 (8%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK ++ ++ L + ++ D D++ + F D Y + I +
Sbjct: 435 RKGLKMDDVTLNTMLRALCRERKLDEAHDLL--CSARRRGYFVDEVSYGTLIIGYFKHEK 492
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
S+A+ +M PS+ T+N ++ L + + G+ D N
Sbjct: 493 ASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNT 552
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G C+ G +E AF ++ ++N +P+V T +TL+ GLC++G +E+A L S+G
Sbjct: 553 IIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKG 612
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D D V++N +I L K+ + E LLE M+ K P+ +Y +L GL D R +A+
Sbjct: 613 KDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAE 672
Query: 324 ELVGRM-----------------------ICERMSPSFVSYKKLIHGLCNQKLVED 356
E + ++ I + P+ ++Y I+ LC+Q +D
Sbjct: 673 EFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQGRYKD 728
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 141/318 (44%), Gaps = 12/318 (3%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L++ +VI +++Q S P+ Y ++I+ + R E + R ++E L D
Sbjct: 283 LKEAANVIELMSQNS----VVPDAWTYNVMISGFCKQGRI--AEAMRLREEMENLKLSPD 336
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
YN + G + + + +M P+ T+N+++ V E+
Sbjct: 337 VVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVR 396
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ G D N L+ C+ G ++ AF ++DE ++ + + T +T++ LC +
Sbjct: 397 KMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRER 456
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++EA LL G D V++ LI G K K + ++L + MK K P+ +Y
Sbjct: 457 KLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYN 516
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ GL + +A + + ++ + P ++Y +IHG C + VE KMV++
Sbjct: 517 SMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEK 576
Query: 368 GFVPRMGMWREIVGCVTF 385
F P ++V C T
Sbjct: 577 NFKP------DVVTCNTL 588
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 134/288 (46%), Gaps = 14/288 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+ Y PN Y++IIN + + + ++ ++ +E C + +N + AG
Sbjct: 236 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKM-IESNC-VPNAVTFNTLIAGFCKAGM 293
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA------AKLGVEID 197
+ AI+ +M C ++ T+N +++ L + G+YT+ G+
Sbjct: 294 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR-----GGVYTAVDLFNKLEGAGLTPT 348
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L++G C+ L A DE + C PNV TYS L+ GLC+ ++EA LE
Sbjct: 349 IVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLE 407
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M++ G VT+ LI+G K G+++ + E+MK GC PN+ + ++ GL +
Sbjct: 408 DMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAE 467
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
R + L+ M E P ++Y LI GLC+ VED + M
Sbjct: 468 RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA 515
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 40/267 (14%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A R+ +A+E +M + P +++++++L+ L + E ++++ + D
Sbjct: 154 ANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSA---MTCSPDIMT 210
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS----------------------- 237
N+L+ G C+ G A ++ E K EPNV TYS
Sbjct: 211 YNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMI 270
Query: 238 ------------TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL-RKQGKV 284
TL+ G C+ G +E+A L ME G A VT+N LI L +K+G V
Sbjct: 271 ESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGV 330
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ L +++G G P +Y ++ G D +R EA + M + +P+ ++Y L
Sbjct: 331 YTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEME-GKCAPNVITYSIL 389
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I GLC + +++ L+ M G+ P
Sbjct: 390 IDGLCKVRRMKEAAKTLEDMKAHGYTP 416
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 7/226 (3%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ T+N+++ + +++ G+ +A +N LL GLCE G + +A +
Sbjct: 30 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 89
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL-- 278
E P +++ L+ G G V +A L+ M T T+N+++ GL
Sbjct: 90 FREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCW 149
Query: 279 --RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
+ ++E+ M+ + MK G P+ SY +L L D R EA L M C SP
Sbjct: 150 ENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTC---SP 206
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
++Y L+ G C + ++K++++ G+ P + + I+ C
Sbjct: 207 DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINC 252
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 6/252 (2%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A E M NC P+ TFN ++ A + + ++ K+G + N
Sbjct: 258 KVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYN 317
Query: 203 ILLKGLCEN-GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ LC+ G + A + ++ P + TY++L+ G C+ + EA + ME
Sbjct: 318 TLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEG 377
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + +T++ILI GL K +++E K LE MK G P +Y ++ G
Sbjct: 378 K-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKS 436
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A +M +P+ V + LI GLC + D +L M +G P + +
Sbjct: 437 ALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYN---- 492
Query: 382 CVTFGKDNRNRV 393
C+ G + NRV
Sbjct: 493 CLISGLCSANRV 504
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 119/286 (41%), Gaps = 9/286 (3%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ PN Y ++I + + + +K L + N + + G++S
Sbjct: 28 FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGL--LPNASTMNTLLLGLCEIGQMSS 85
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A++ +M + P+ + N++L A + K + N++LK
Sbjct: 86 ALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLK 145
Query: 207 GLC-ENGN---LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
GLC EN + LE A E EP++ +Y L+ L + G + EA L M
Sbjct: 146 GLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTC- 204
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
D +T+N+L+ G K G+ E L++ + G PN +Y ++ + EA
Sbjct: 205 --SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEA 262
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
E+ +MI P+ V++ LI G C ++ED + +M + G
Sbjct: 263 WEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIG 308
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 27/265 (10%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQ 183
YNV+ G++ +A+ DM S P+ T N +L + + KL+ E+Q
Sbjct: 35 YNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQ 94
Query: 184 G---IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ TSA+ NILL+G G + A L + K + TY+ ++
Sbjct: 95 AGPFLPTSASH----------NILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVL 144
Query: 241 HGLC----EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
GLC +E+A + M++ G++ D +++IL+S L G++ E L M
Sbjct: 145 KGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT- 203
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
C P+ +Y ++ G + EA+ L+ ++ P+ +Y +I+ C VE+
Sbjct: 204 --CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEE 261
Query: 357 VDWVLKKMVQQGFVPRMGMWREIVG 381
V KM++ VP + ++
Sbjct: 262 AWEVFMKMIESNCVPNAVTFNTLIA 286
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG--IYTSAAKL-GVEIDAC 199
R+ +A +TL DM ++ P+V T+ ++N GE++ ++ KL G +
Sbjct: 398 RMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKC---GELKSALLFFEKMKLAGCAPNTV 454
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ GLC+ +L + C+P+V TY+ L+ GLC VE+A L + M
Sbjct: 455 IFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM 514
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ TFN LI GL Q KVEE +L+
Sbjct: 515 ACA---PNVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 4/176 (2%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL GL + A + E PN TY+ L+ G C+ G + +A + M+S
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ + T N L+ GL + G++ +KL M+ P SAS+ +L G R +
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC----NQKLVEDVDWVLKKMVQQGFVPRM 373
A + M S + +Y ++ GLC + +E K+M G P +
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDL 176
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 17/175 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
PN Y+++I+ L + +R ++ +K + G+ V+ YG + G
Sbjct: 381 PNVITYSILIDGLCKVRRMKEAAKTLEDMK-------AHGYTPTVVT-YGGLINGFCKCG 432
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A+ M C P+ FN +++ L A+ + + G + D N
Sbjct: 433 ELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYN 492
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
L+ GLC +E A + D C PNV T++ L+ GLC + VEEA +L+
Sbjct: 493 CLISGLCSANRVEDAQRLFDGMA---CAPNVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 68/157 (43%)
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+ L+ GL ++A L + + + + T+N+LI G K G++ + + + MK
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
G PN+++ +L GL + + A +L M P+ S+ L+ G V D
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 357 VDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRV 393
L+ M + G + ++ + + + NR+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRL 157
>gi|224070831|ref|XP_002303255.1| predicted protein [Populus trichocarpa]
gi|222840687|gb|EEE78234.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 137/285 (48%), Gaps = 9/285 (3%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
RDP + ++ ++ + N + +++LA A RFD IE +++ K R +G
Sbjct: 50 RDPEKLFNLFKANAENRLVVENRFAFEDTVSRLAGANRFDYIEHLLEHQKPLPQGR-REG 108
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F +I +YG AG I AI+T ++M + C +VK+ N L +L + I+
Sbjct: 109 FMVRIIMLYGK-AGMIKHAIDTFYNMHLHGCKRTVKSVNAALKVLTGTRDLAAIEAFVNE 167
Query: 189 AAK-LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
A K +E+D +NI++K LCE GNL+ A+ ++ E K P+V TY+TLM +
Sbjct: 168 APKKFDIELDIFSVNIIVKALCETGNLDKAYLLMVEMEKSGVRPDVITYTTLMSAFYKNN 227
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILIS---GLRKQGKVEEGMKLLERMKGKGCYPNSA 304
E GL M +G + TFN+ I +R+ + M+L+ ++ G P+
Sbjct: 228 RSEIGNGLWNLMVLKGCLPNLATFNVRIQYLVNIRRAWHANDVMRLMLKI---GIVPDEV 284
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+Y V+ G + AK + + + + Y+ ++H LC
Sbjct: 285 TYNLVIKGFFQTGKLEMAKMVYFSLRGKGHKFNVKVYQTMVHYLC 329
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 114/262 (43%), Gaps = 7/262 (2%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
S LK+ + RD ++ + +N+ K+ D + +I+ L + D +M
Sbjct: 144 SVNAALKVLTGTRDLAAIEAFVNEAPKKFDIELDIFSVNIIVKALCETGNLDKAYLLM-- 201
Query: 117 IKVEKLCRFSDGFFYNVI--KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+++EK D Y + Y N I + L M C P++ TFN+ + LV
Sbjct: 202 VEMEKSGVRPDVITYTTLMSAFYKNNRSEIGNGLWNL--MVLKGCLPNLATFNVRIQYLV 259
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
+ + + K+G+ D N+++KG + G LE A V + + NV+
Sbjct: 260 NIRRAWHANDVMRLMLKIGIVPDEVTYNLVIKGFFQTGKLEMAKMVYFSLRGKGHKFNVK 319
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y T++H LC+ G + A+ + + T + L+ GL+K G++ + K++ +
Sbjct: 320 VYQTMVHYLCKGGEFDLAYTMCRDCMRNNWFLNVDTIHTLLEGLKKNGQLNKA-KVIVTL 378
Query: 295 KGKGCYPNSASYQEVLYGLLDK 316
K P +S+ L +L +
Sbjct: 379 AQKRVPPFPSSHLRSLQAVLSR 400
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 2/270 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +Y+++I+ L + + +++++++ +F F + + G IS+A
Sbjct: 444 PDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKR--KFPHHFAQRAVLLGLFKNGNISEAR 501
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ V +N++++ V E +Y + G+ N L+ G
Sbjct: 502 NYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGF 561
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G+L A +L+ + P+V TY+TLM+ CE GN++E F L ME+ +
Sbjct: 562 CRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTH 621
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ +LI GL +Q K+ E ++LLE M KG P+S +Y ++ K +A +L
Sbjct: 622 VTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNM 681
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
M+ P+ V+YK LI+ LC ++DVD
Sbjct: 682 MLLHNCDPTQVTYKVLINALCIFGDLKDVD 711
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ + N +++ L + + K G+ D+ NILL GLC G+++ A
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+ K EP+V TY+TL G G + A ++++M +G++ D VT+ LI G +
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G +EE +KL + +G N Y +L L R EA L M R+ P F+
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448
Query: 341 YKKLIHGLCNQKLVE 355
Y LIHGLC + V+
Sbjct: 449 YSILIHGLCKEGFVQ 463
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 137/318 (43%), Gaps = 13/318 (4%)
Query: 66 SNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF 125
S L D IS + + K P+ I++K + D + L
Sbjct: 251 SKLEDAISFL-----HDSNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGL--L 303
Query: 126 SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D F YN++ +AG + +A+ DM + P V T+N L L G + G
Sbjct: 304 HDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYN---TLAKGFLLLGLMSGA 360
Query: 186 YTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
K+ G+ D L+ G C+ GN+E A + E + + NV Y+ L+
Sbjct: 361 RKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSC 420
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC+ G +EEA L + ME+ ++ D + ++ILI GL K+G V+ +L E+M+ K +P+
Sbjct: 421 LCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPH 480
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+ + VL GL EA+ + V Y +I G + + +
Sbjct: 481 HFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYY 540
Query: 363 KMVQQGFVPRMGMWREIV 380
KM+++G P + + ++
Sbjct: 541 KMIERGITPSVVTFNTLI 558
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 143/312 (45%), Gaps = 24/312 (7%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------- 140
NP+ YT +I Q IE+ + +++ E L R GF NVI + NM
Sbjct: 373 NPDLVTYTTLICGHCQMGN---IEEAL-KLRQETLSR---GFKLNVI--FYNMLLSCLCK 423
Query: 141 AGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE---I 196
GRI +A+ TLFD M + P ++++++ L G +Q Y ++ ++
Sbjct: 424 VGRIEEAL-TLFDEMETLRLEPDFIVYSILIHGLCKE---GFVQRAYQLYEQMRLKRKFP 479
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+L GL +NGN+ A D + + + +V Y+ ++ G + EA L
Sbjct: 480 HHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLY 539
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+M GI VTFN LI+G ++G + E K+LE ++ KG P+ +Y ++ +
Sbjct: 540 YKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEV 599
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
E + M + P+ V+Y LI GLC Q + + +L+ M +G +P +
Sbjct: 600 GNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTY 659
Query: 377 REIVGCVTFGKD 388
I+ C GK+
Sbjct: 660 NTIIQCFCKGKE 671
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 156/346 (45%), Gaps = 22/346 (6%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYT--LIINKLAQAKRFDAIEDI 113
LS T V + LR ++V Y +Y ++++ ++ + LA RF ++ +
Sbjct: 80 LSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKELDSV 139
Query: 114 MQRIKVEK-------LCRF---------SDGFFYNVIKIYGNMAGRISKAIETLFDMPSY 157
++ + V++ +C S+G ++++ + I A+ + M
Sbjct: 140 IKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDL 199
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
N SV T+N +LL + + + +Y G C +IL+ GLCE LE A
Sbjct: 200 NFQASVPTYN---SLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDA 256
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
L + K P++ + +T+M C+ G ++ A M G+ D+ ++NIL+ G
Sbjct: 257 ISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHG 315
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L G ++E + + M+ G P+ +Y + G L A+++V +M+ + ++P
Sbjct: 316 LCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPD 375
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
V+Y LI G C +E+ + ++ + +GF + + ++ C+
Sbjct: 376 LVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCL 421
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 115/281 (40%), Gaps = 37/281 (13%)
Query: 127 DGFFYNV-IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKL 178
D YN+ I Y + G I++A++ + M PSV TFN ++N L+ + K+
Sbjct: 515 DVVLYNIMIDGYVRLDG-IAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKM 573
Query: 179 YGEI--QGIYTSAAKLGVEIDACC--------------------------LNILLKGLCE 210
I +G+ S ++A C +L+KGLC
Sbjct: 574 LEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCR 633
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
+ + +L+ + P+ TY+T++ C+ + +A L M D VT
Sbjct: 634 QNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVT 693
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ +LI+ L G +++ +++ ++ + +Y ++ K + +A +M+
Sbjct: 694 YKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQML 753
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ S Y +I+ LC + L+ + + M+ +G P
Sbjct: 754 AKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTP 794
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 100/231 (43%), Gaps = 2/231 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G + + L +M + P+ T+ L+ L K++ +Q + AK G+ D+
Sbjct: 599 VGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAK-GLLPDSV 657
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N +++ C+ + A + + NC+P TY L++ LC G++++ ++ +
Sbjct: 658 TYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSI 717
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E I VT+ +I +G+V + + +M KG + Y V+ L +
Sbjct: 718 EDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLI 777
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
EAK M+ E ++P K +++ Q V L +V+ GF+
Sbjct: 778 TEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 117/241 (48%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ A+ +M +PS+ F+ +L+ + + + + LG+ + +
Sbjct: 675 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C L A VL + K EPN+ T S+L++G C + EA L+++M
Sbjct: 735 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G +TVTFN LI GL K E M L++RM KGC P+ +Y V+ GL + A
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ P + Y +I GLC K ++D + K+M +G P + + ++ C
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914
Query: 383 V 383
+
Sbjct: 915 L 915
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 3/281 (1%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
++LN+ + K P +Y II+ L + K D ++ + ++ + + R + + ++I
Sbjct: 856 NLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI-RPNVVTYSSLIS 913
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
N GR S A L DM P V TF+ +++ V E + +Y K ++
Sbjct: 914 CLCNY-GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 972
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+ L+ G C + L+ A + + ++C P+V TY+TL+ G C+ VEE +
Sbjct: 973 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 1032
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
M G+ +TVT+NILI GL + G + ++ + M G PN +Y +L GL
Sbjct: 1033 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 1092
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+ +A + + +M P+ +Y +I G+C VED
Sbjct: 1093 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 1133
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 139/295 (47%), Gaps = 16/295 (5%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRF-DA---IEDIMQRIKVEKLCRFS---DGFFYNVIK 135
+RK PN YT ++N L + R+ DA + D++++ + +S D F N
Sbjct: 320 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN--- 376
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
G++ +A E +M + P + T++ ++N L E ++ G
Sbjct: 377 ------GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 430
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D N L+ G C+ +E + E ++ N TY+TL+ G + G+V++A
Sbjct: 431 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 490
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+M+ GI D T+NIL+ GL G++E+ + + E M+ + + +Y V+ G+
Sbjct: 491 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 550
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ EA L + + + P V+Y ++ GLC + L+ +V+ + KM Q+G +
Sbjct: 551 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 605
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 12/289 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG---- 142
Y PN + ++N +KR ++ ++ F G+ N + + G
Sbjct: 761 YEPNIVTLSSLLNGYCHSKRISEAVALVDQM-------FVTGYQPNTVTFNTLIHGLFLH 813
Query: 143 -RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ S+A+ + M + C P + T+ +V+N L + + +E
Sbjct: 814 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 873
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ GLC+ +++ A + E + PNV TYS+L+ LC G +A LL M
Sbjct: 874 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 933
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
I+ D TF+ LI K+GK+ E KL + M + P+ +Y ++ G R E
Sbjct: 934 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 993
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
AK++ M+ + P V+Y LI G C K VE+ V ++M Q+G V
Sbjct: 994 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 1042
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 129/258 (50%), Gaps = 5/258 (1%)
Query: 128 GFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
G+ N++ + + G RIS+A+ + M P+ TFN +++ L E
Sbjct: 760 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 819
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ G + D +++ GLC+ G+ + AF +L++ + EP V Y+T++ G
Sbjct: 820 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 879
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC+ ++++A L + ME++GI + VT++ LIS L G+ + +LL M + P+
Sbjct: 880 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 939
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
++ ++ + + + EA++L M+ + PS V+Y LI+G C +++ + +
Sbjct: 940 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 999
Query: 363 KMVQQGFVPRMGMWREIV 380
MV + P + + ++
Sbjct: 1000 FMVSKHCFPDVVTYNTLI 1017
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 141/322 (43%), Gaps = 27/322 (8%)
Query: 70 DPISVISVLNQYSKRK---------------DYNPNEALYTLIINKLAQAKRFDAIEDIM 114
D +++ S++N + +R Y P+ Y II+ L + KR + D
Sbjct: 257 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 316
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLV 169
+ I+ + G NV+ + G R S A L DM P+V T++ +
Sbjct: 317 KEIERK-------GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 369
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
L+ V E + ++ ++ ++ D + L+ GLC + ++ A + D + C
Sbjct: 370 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 429
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+V +Y+TL++G C+ VE+ L M G+ ++TVT+N LI G + G V++ +
Sbjct: 430 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 489
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+M G P+ +Y +L GL D +A + M M V+Y +I G+C
Sbjct: 490 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 549
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
VE+ + + +G P
Sbjct: 550 KTGKVEEAWSLFCSLSLKGLKP 571
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 133/279 (47%), Gaps = 4/279 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
Y P+ ++N + R DA+ + + +++ D YN I R++
Sbjct: 254 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK---PDIVAYNAIIDSLCKTKRVN 310
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A + ++ P+V T+ ++N L ++ + + + + K + + + LL
Sbjct: 311 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 370
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
+NG + A + +E + + +P++ TYS+L++GLC ++EA + + M S+G
Sbjct: 371 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 430
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
AD V++N LI+G K +VE+GMKL M +G N+ +Y ++ G +A+E
Sbjct: 431 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 490
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+M +SP +Y L+ GLC+ +E + + M
Sbjct: 491 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 529
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 122/254 (48%), Gaps = 2/254 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+++ AI+ DM +PS+ FN +L+ +V K Y + + LG+ D N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ C + A +L + K EP+ T +L++G C + V +A L+++M
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D V +N +I L K +V + + ++ KG PN +Y ++ GL + R+ +A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG- 381
L+ MI ++++P+ ++Y L+ V + + ++MV+ P + + ++
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407
Query: 382 -CVTFGKDNRNRVY 394
C+ D N+++
Sbjct: 408 LCLHDRIDEANQMF 421
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 110/230 (47%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
M R+ +A + M S +C+P V T+N ++ K E ++ ++ G+ +
Sbjct: 987 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 1046
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NIL++GL + G+ + A + E PN+ TY+TL+ GLC+ G +E+A + E +
Sbjct: 1047 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 1106
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ ++ T+NI+I G+ K GKVE+G L + KG P+ +Y ++ G K
Sbjct: 1107 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 1166
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
EA L M + P+ Y LI E ++K+M GF
Sbjct: 1167 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 1216
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 132/292 (45%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +++ + + K++D + + ++++V L +D + +N++ ++S A+
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEV--LGIRNDLYTFNIVINCFCCCFQVSLAL 243
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M P T ++N + + ++G + D N ++ L
Sbjct: 244 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 303
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ + AF E ++ PNV TY+ L++GLC +A LL M + I +
Sbjct: 304 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 363
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ L+ K GKV E +L E M P+ +Y ++ GL R EA ++
Sbjct: 364 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 423
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + VSY LI+G C K VED + ++M Q+G V + ++
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 475
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 125/270 (46%), Gaps = 12/270 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +P+ Y+ +IN L R D + + V K C +D YN + A R
Sbjct: 391 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFD-LMVSKGC-LADVVSYNTLINGFCKAKR 448
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ ++ +M + T+N ++ A + Q ++ G+ D NI
Sbjct: 449 VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI 508
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC+NG LE A + ++ K+ + ++ TY+T++ G+C+ G VEEA+ L + +G
Sbjct: 509 LLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 568
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D VT+ ++SGL +G + E L +MK +G N + L +
Sbjct: 569 LKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT--------LSDGDITLSA 620
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
EL+ +M+ +PS + K + G+C + L
Sbjct: 621 ELIKKMLSCGYAPSLL--KDIKSGVCKKAL 648
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+S A+ + M P + +N +++ L K + + + G+ +
Sbjct: 273 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 332
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC + A +L + K+ PNV TYS L+ + G V EA L E M
Sbjct: 333 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 392
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
ID D VT++ LI+GL +++E ++ + M KGC + SY ++ G KR +
Sbjct: 393 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 452
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+L M + + V+Y LI G V+ +M G P + + ++G
Sbjct: 453 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 511
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 124/294 (42%), Gaps = 2/294 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN + +I+ L + ++ R+ V K C+ D Y V+ G
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRM-VAKGCQ-PDLVTYGVVVNGLCKRGDTDL 853
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M P V +N +++ L K + ++ G+ + + L+
Sbjct: 854 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC G A +L + ++ P+V T+S L+ ++G + EA L + M ID
Sbjct: 914 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 973
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
VT++ LI+G +++E ++ E M K C+P+ +Y ++ G KR E E+
Sbjct: 974 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 1033
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + + V+Y LI GL + + K+MV G P + + ++
Sbjct: 1034 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 1087
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------GR 143
N Y ++I L QA D ++I + + SDG N++ Y + G+
Sbjct: 1044 NTVTYNILIQGLFQAGDCDMAQEIFKEM-------VSDGVPPNIM-TYNTLLDGLCKNGK 1095
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA+ + P++ T+N+++ + A + ++ + + GV+ D N
Sbjct: 1096 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 1155
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G C G+ E A + E + PN Y+TL+ G+ E + L++ M S G
Sbjct: 1156 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 1215
Query: 264 IDADTVTFNILISGLRKQGKVEE 286
D T L++ + G++++
Sbjct: 1216 FAGDASTIG-LVTNMLHDGRLDK 1237
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 3/289 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R PN Y +++ L R + ++ ++ + YN + AG
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCA--PNAVTYNTLVAAFCRAGE 202
Query: 144 ISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A + M N P++ TFN ++N L A + ++ + G+ D N
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
LL G C+ G L + V E ++ P+V T+++L+H C+ GN+E+A L+ +M
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + VTF LI G K+G +++ + +E M+ G P+ Y ++ G R A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+EL+ M +R+ P V+Y +I G C ++ + +KM+++G +P
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 431
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 143/298 (47%), Gaps = 5/298 (1%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
V+S++ + K PN + ++N L +A R + + + E L D YN
Sbjct: 209 VVSLMREEGNAK---PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLA--PDVVSYNT 263
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ G + +++ +M P V TF +++ A + + + G
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ ++ L+ G C+ G L+ A ++E K +P+V Y+ L++G C+ G ++ A
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L+ ME++ + D VT++ +ISG K G ++ +L ++M KG P++ +Y ++ GL
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++KR +A EL M+ + P +Y LI G C + VE + +M+++G +P
Sbjct: 444 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 501
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 2/210 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PSV +N VL L A L + +S + GV + NIL++ LC G LE A V
Sbjct: 116 PSVPAYNAVLLALSDASL-PSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-IDADTVTFNILISGLR 279
+ + C PN TY+TL+ C G ++ A ++ M EG + VTFN +++GL
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K G++E K+ + M +G P+ SY +L G E+ + M + P V
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
++ LIH C +E ++ +M ++G
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGL 324
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 144/317 (45%), Gaps = 21/317 (6%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L + ++V S + Q + P+ +T +I+ +A + ++ +++ E+ R ++
Sbjct: 274 LHESLAVFSEMTQ----RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR-ERGLRMNE 328
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F +I + G + A+ + +M PSV +N ++N + +
Sbjct: 329 VTFTALIDGFCK-KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 387
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
V+ D + ++ G C+ GNL++AF + + K+ P+ TYS+L+ GLCE+
Sbjct: 388 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 447
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+ +A L E M G+ D T+ LI G K+G VE+ + L + M KG P+ +Y
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 507
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK---------------KLIHGLCNQK 352
++ GL R EA L+ ++ E P + Y L+ G C +
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 353 LVEDVDWVLKKMVQQGF 369
L+++ D V + M+ + +
Sbjct: 568 LMKEADKVYQSMLDRNW 584
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 145/322 (45%), Gaps = 25/322 (7%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
NL +++++ + + R NE +T +I+ + K F ++D + ++ + C
Sbjct: 308 NLEQAVALVAQMRERGLRM----NEVTFTALIDGFCK-KGF--LDDALLAVEEMRKCGIQ 360
Query: 127 DGFF-YN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
YN +I Y + GR+ A E + +M + P V T++ +++
Sbjct: 361 PSVVCYNALINGYCKL-GRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ K GV DA + L++GLCE L A + + + +P+ TY+TL+ G C
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++GNVE+A L + M +G+ D VT+++LI+GL K + +E +LL ++ + P++
Sbjct: 480 KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNI 539
Query: 305 SYQEV---------------LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
Y + L G K EA ++ M+ Y LIHG C
Sbjct: 540 KYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHC 599
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
V K+M++ GF P
Sbjct: 600 RGGNVRKALSFHKQMLRSGFSP 621
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
+ +L +A L + PNV TY+ L+ LC +G +EEA G++ M G + VT
Sbjct: 130 DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVT 189
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKG-CYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+N L++ + G+++ +++ M+ +G PN ++ ++ GL R A+++ M
Sbjct: 190 YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 249
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ E ++P VSY L+ G C + + V +M Q+G VP
Sbjct: 250 VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 23/228 (10%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIE--DIMQRIKVEKLCRFSDGFFYNVI 134
LNQ +K P+ Y+ +I L + KR DA E + M ++ V+ D F Y +
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP-----DEFTYTTL 474
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI-----YTSA 189
G + KA+ +M P V T+++++N L + E + +
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534
Query: 190 AKLGVEIDA---CC-------LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
++ DA CC + LLKG C G ++ A V +N + + YS L
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
+HG C GNV +A ++M G ++ + L+ GL ++G V E
Sbjct: 595 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642
>gi|125539402|gb|EAY85797.1| hypothetical protein OsI_07159 [Oryza sativa Indica Group]
Length = 506
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 144/327 (44%), Gaps = 16/327 (4%)
Query: 58 PTEVLKIFSNLRDPISVISVLNQYSKRKDY--NPNEALYTLIINKLAQAKRFDAIEDIMQ 115
P + ++ ++LRDP R Y PN +Y ++I + +
Sbjct: 169 PDVLTELLADLRDP------------RSKYLPQPNTCIYNILIKYYVKKGDLGTAFQVFD 216
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAG-RISKAIETLFDMPSYN-CWPSVKTFNLVLNLL 173
++ I G G ++ +A E DM + P T+NL++
Sbjct: 217 EMRNMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTYNLLIGGF 276
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ Q I+ K E +A L+ G C+ G +EAA V +E + +P+
Sbjct: 277 CRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRSGVQPDA 336
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+Y++L+ LC GNV+E L++ M +G AD VT+N+L+ GL K ++ E + LLE+
Sbjct: 337 VSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEK 396
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+ +G N ASY+ V+ L +A L+G M+ P + + L+ GLC+
Sbjct: 397 LPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGR 456
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
V D L +V GF+P W ++
Sbjct: 457 VSDATVTLYGLVDTGFMPEARCWARLI 483
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 15/309 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++I+ +R D I+ ++E Y + + G + K
Sbjct: 292 PNAVFYNVLID--GYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIA 349
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +M P+V+ +N V++ L + + + G + DA + L+ GL
Sbjct: 350 SLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGL 409
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G ++ A +L E + PN+ +Y++L+HG C +G V A LL M G D
Sbjct: 410 CQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDV 469
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VTF LI GL G+V E + + E+M + P++ Y ++ GL KK P A+ L+
Sbjct: 470 VTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEE 529
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-------------RMGM 375
M+ + + P Y LI G + +++ + + M Q+G P + GM
Sbjct: 530 MLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGM 589
Query: 376 WREIVGCVT 384
E V C++
Sbjct: 590 MNEAVECMS 598
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 139/302 (46%), Gaps = 5/302 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISK 146
+P+ ++ +I+ L Q R E +++ +L + I+G + G +
Sbjct: 396 DPDAITFSTLISGLCQEGRVQEAERLLRETTRWEL---NPNLSSYTSLIHGFCVRGEVIV 452
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L +M P V TF +++ LV A E + A + DA N+L+
Sbjct: 453 ASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLIS 512
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ L AA +++E +QN P+ Y+TL+ G +++EA + E ME +GI
Sbjct: 513 GLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHP 572
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D V +N +I G + G + E ++ + M+ G P+ +Y ++ G + A L+
Sbjct: 573 DVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLL 632
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
M+ R P+ V+Y LI+G C + + + M QG P + + ++G + F
Sbjct: 633 CDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSL-FK 691
Query: 387 KD 388
KD
Sbjct: 692 KD 693
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 151/326 (46%), Gaps = 14/326 (4%)
Query: 66 SNLRDPISVISVLNQYSKRKDYNPNEAL------YTLIINKLAQAKRFDAIEDIMQRIKV 119
++L DP +++L+ R + ++ ++ LA+A RFDA++ ++ + +
Sbjct: 119 ASLADPDHALALLSWSRSRSRHEAAALPAATPLAHSALLRLLARAGRFDAVDATLRDMSL 178
Query: 120 EKLCRF--SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYN-CWPSVKTFNLVLNLLVSA 176
+ ++ Y + AG +KA E ++ P N +L LLV
Sbjct: 179 AGAAAAVPTRACLGALVATYAD-AGMEAKAAEMCQRAREHHGTLPGATHTNRLLRLLVER 237
Query: 177 KLYGEIQGIYTS--AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
+ + + + +Y A + G + + C ++++GLC G +E +++ C PN
Sbjct: 238 RRWDDARKLYDEMLAEESGADDYSTC--VMVRGLCLEGLVEKGLKLIEARWGAGCVPNAV 295
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y+ L+ G C +G+V LL ME++G+ VT+ L+S L ++G +E+ LL M
Sbjct: 296 FYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEM 355
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+ + PN Y V+ L + +A ++ +M P +++ LI GLC + V
Sbjct: 356 RERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRV 415
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
++ + +L++ + P + + ++
Sbjct: 416 QEAERLLRETTRWELNPNLSSYTSLI 441
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 148/378 (39%), Gaps = 55/378 (14%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
+R + V S L + + P+ + +I+ L A + E ++ R K+ D
Sbjct: 446 VRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVS--EALLVREKMAARQLLPD 503
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
YNV+ I G ++ A L + M N P + +++ + + E + I+
Sbjct: 504 ANIYNVL-ISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIF 562
Query: 187 TSAAKLGVEIDACCLNILLKGLCE-----------------------------------N 211
+ G+ D N ++KG C+
Sbjct: 563 EFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQ 622
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
GN+ A +L + K+ C+PNV YS+L++G C+ G+ + A L MES+G+ + +T+
Sbjct: 623 GNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITY 682
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD------KKRFPEAKEL 325
ILI L K+ KV E M C PN + ++ GL + L
Sbjct: 683 TILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNL 742
Query: 326 VGR---------MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
G+ ++ +R P +Y +I LC ++ + + KM +G+ P +
Sbjct: 743 HGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATF 802
Query: 377 REIV-GCVTFGKDNRNRV 393
++ G + GK R
Sbjct: 803 LSLLYGFCSVGKSREWRT 820
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 117/271 (43%), Gaps = 10/271 (3%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRF----DAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
+ R + NPN + YT +I+ + + ++M+R + F + ++
Sbjct: 425 TTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFG-ALIHGLV--- 480
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+AG++S+A+ M + P +N++++ L K+ + + + V D
Sbjct: 481 --VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPD 538
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
L+ G N +L+ A + + ++ P+V Y+ ++ G C+ G + EA +
Sbjct: 539 KYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMS 598
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M G D T+ LI G KQG + + LL M + C PN +Y ++ G
Sbjct: 599 TMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLG 658
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
A+ L G M + + P+ ++Y LI L
Sbjct: 659 DTDAAECLFGSMESQGLFPNVITYTILIGSL 689
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 98/262 (37%), Gaps = 52/262 (19%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
++ ++K +P+ Y +I Q + + M ++ K+ R D F Y +
Sbjct: 563 EFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMR--KVGRIPDEFTYTTLIGGYA 620
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL-------VSAKLYG--EIQGIYTSAA 190
G IS A+ L DM C P+V ++ ++N + L+G E QG++ +
Sbjct: 621 KQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVI 680
Query: 191 KLGVEIDAC--------------------------CLNILLKGLCENG------------ 212
+ I + L+ L+ GLC +
Sbjct: 681 TYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTV 740
Query: 213 NLEAAFYVLDEFP---KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
NL +LD F C+P Y+ ++ LC + EA L +M ++G D+
Sbjct: 741 NLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSA 800
Query: 270 TFNILISGLRKQGKVEEGMKLL 291
TF L+ G GK E +L
Sbjct: 801 TFLSLLYGFCSVGKSREWRTIL 822
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 131/267 (49%), Gaps = 4/267 (1%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
A Y L+++ L R ++++ + + L D F YN++ G + KA+E
Sbjct: 627 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLA--PDVFTYNILINGHCKEGNVKKALEIF 684
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+M +V T+ ++ L E ++ A + G+ D N L+ +
Sbjct: 685 ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 744
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
GN++ AF ++ E K+ P+ TY+TLM GLC G V+EA L++ M GI D VT+
Sbjct: 745 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 804
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N LISG +G V++ +++ M KG P +Y ++ GL + +A+ +V M+
Sbjct: 805 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 864
Query: 332 ERMSPSFVSYKKLIHGLC--NQKLVED 356
++P +Y LI GL +++ ++D
Sbjct: 865 NGITPDDSTYISLIEGLTTEDERAIDD 891
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 140/298 (46%), Gaps = 2/298 (0%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ V ++ + + P +Y +I + D R+ VE+ + YN+
Sbjct: 574 AVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM-VERGVAMTVAT-YNL 631
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ M GR ++A E + +M P V T+N+++N + I+ + ++ G
Sbjct: 632 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 691
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
V L+ L + G ++ + DE ++ P++ Y+ L++ GN++ AF
Sbjct: 692 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 751
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
++ ME + I D VT+N L+ GL G+V+E KL++ M +G P+ +Y ++ G
Sbjct: 752 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 811
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K +A + M+ + +P+ ++Y LI GLC +D + ++K+MV+ G P
Sbjct: 812 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 869
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 154/332 (46%), Gaps = 19/332 (5%)
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
P + +L Q + PN Y +I R A DIM+ ++ E+ + +
Sbjct: 504 PARALELLRQMPR-----PNAVTYNTVIAGFCSRGRVQAALDIMREMR-ERGGIAPNQYT 557
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA- 189
Y + GR+ +A++ +M + VK ++ N L+ Y + QG +A
Sbjct: 558 YGTVISGWCKVGRVDEAVKVFDEMLTKG---EVKPEAVMYNALIGG--YCD-QGKLDTAL 611
Query: 190 ------AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ GV + N+L+ L +G A+ +++E + P+V TY+ L++G
Sbjct: 612 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 671
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C++GNV++A + E M G+ A VT+ LI L K+G+V+E KL + +G P+
Sbjct: 672 CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 731
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
Y ++ A E++G M +R++P V+Y L+ GLC V++ ++ +
Sbjct: 732 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 791
Query: 364 MVQQGFVPRMGMWREIVGCVTFGKDNRNRVYV 395
M ++G P + + ++ + D ++ + +
Sbjct: 792 MTERGIQPDLVTYNTLISGYSMKGDVKDALRI 823
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 146/330 (44%), Gaps = 2/330 (0%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ + ++ + +R PN+ Y +I+ + R D + + + + +
Sbjct: 537 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 596
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+I Y + G++ A+ M +V T+NL+++ L E +
Sbjct: 597 LIGGYCDQ-GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 655
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+ D NIL+ G C+ GN++ A + + ++ V TY+ L++ L +KG V+E
Sbjct: 656 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 715
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L + GI D V +N LI+ G ++ +++ M+ K P+ +Y ++ G
Sbjct: 716 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 775
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L R EA++L+ M + P V+Y LI G + V+D + +M+ +GF P
Sbjct: 776 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 835
Query: 373 MGMWREIV-GCVTFGKDNRNRVYVTETVDS 401
+ + ++ G G+ + V E V++
Sbjct: 836 LLTYNALIQGLCKNGQGDDAENMVKEMVEN 865
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 10/212 (4%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S + + +L+ L SA + ++ +L + + NI+L+ LC G A +L
Sbjct: 456 STASLHPLLSALPSAPAFA----LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELL 511
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFNILISGLRK 280
+ P+ PN TY+T++ G C +G V+ A ++ M E GI + T+ +ISG K
Sbjct: 512 RQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 567
Query: 281 QGKVEEGMKLLERMKGKG-CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
G+V+E +K+ + M KG P + Y ++ G D+ + A RM+ ++ +
Sbjct: 568 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 627
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y L+H L + ++++M +G P
Sbjct: 628 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 659
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+H L AF L M + T TFNI++ L GK ++LL +M
Sbjct: 460 LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP---- 515
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICER--MSPSFVSYKKLIHGLCNQKLVEDV 357
PN+ +Y V+ G + R A +++ R + ER ++P+ +Y +I G C V++
Sbjct: 516 RPNAVTYNTVIAGFCSRGRVQAALDIM-REMRERGGIAPNQYTYGTVISGWCKVGRVDEA 574
Query: 358 DWVLKKMVQQGFV-PRMGMWREIVG 381
V +M+ +G V P M+ ++G
Sbjct: 575 VKVFDEMLTKGEVKPEAVMYNALIG 599
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 126/252 (50%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+F+N++ G I A + + PSV +FN ++N + E + ++
Sbjct: 129 YFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSA 188
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
GVE D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 189 MHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 248
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V+ A + ++M S+ + AD +T+N LI GL K+G +++ L++ M+ KG P+ +Y
Sbjct: 249 VDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTT 308
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + A E RMI E + V Y LI GLC + D + +L++M+ G
Sbjct: 309 LIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVG 368
Query: 369 FVPRMGMWREIV 380
P G + I+
Sbjct: 369 LKPDTGTYTMII 380
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 71 SGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEILECGYPASLYF 130
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C+ G + A V D K P+V +++TLM+G G+++E F L M
Sbjct: 131 FNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 190
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G++ D T+++LI+GL K+ K++ +L + M KG PN ++ ++ G R
Sbjct: 191 ASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 250
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +S ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 251 LAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLI 310
Query: 381 -GCVTFG 386
GC G
Sbjct: 311 DGCCKEG 317
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQ---GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ GEI+ ++ + K G+ N L+ G G+L+ F
Sbjct: 127 SLYFFNILMHRFCKE---GEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 183
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ EP+V TYS L++GLC++ ++ A L + M +G+ + VTF LI G
Sbjct: 184 RLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGH 243
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + + +Y ++YGL K +A+ L+ M + + P
Sbjct: 244 CKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDK 303
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+Q+
Sbjct: 304 ITYTTLIDGCCKEGDLETAFEHRKRMIQE 332
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 108/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L ++ G+ + L+ G C+NG ++ A +
Sbjct: 196 PDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 255
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ ++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G K
Sbjct: 256 YKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCK 315
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G +E + +RM + + Y ++ GL + R +A++++ M+ + P +
Sbjct: 316 EGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGT 375
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 376 YTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 406
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 255 IYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCC 314
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P++
Sbjct: 315 KEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTG 374
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 375 TYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 10/221 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++IN L + + D ++ + + L +G + + GR+ A+
Sbjct: 196 PDVYTYSVLINGLCKESKIDGANELFDEMLDKGL--VPNGVTFTTLIDGHCKNGRVDLAM 253
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M S + + T+N ++ L + Q + G++ D L+ G
Sbjct: 254 EIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGC 313
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVR----TYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
C+ G+LE AF E K+ + N+R Y+TL+ GLC++G +A +L M S G+
Sbjct: 314 CKEGDLETAF----EHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGL 369
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
DT T+ ++I+ K+G V G KLL+ M+ G P+ +
Sbjct: 370 KPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 145/330 (43%), Gaps = 37/330 (11%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQR--------------IKVEKLCRFSDGFFYN 132
+ P+E Y ++N+L ++ D+ ++ I ++ LC+ DG F +
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK--DGSFDD 263
Query: 133 VIKIYGNMA---------------------GRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+ ++ M G+ + L +M N P V TF+ +++
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 323
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
+ V E + +Y G+ D N L+ G C+ L A + D + CEP
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
++ TYS L++ C+ V++ L + S+G+ +T+T+N L+ G + GK+ +L
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ M +G P+ +Y +L GL D +A E+ +M RM+ Y +IHG+CN
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
V+D + + +G P + + ++G
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 116/232 (50%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ GR+S+A+ + M P + T + ++N L E + + G + D
Sbjct: 152 LEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEV 211
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+L LC++GN A + + ++N + +V YS ++ LC+ G+ ++A L M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E +GI AD VT++ LI GL GK ++G K+L M G+ P+ ++ ++ + + +
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EAKEL MI ++P ++Y LI G C + + + + + MV +G P
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 37/269 (13%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+ Y+++IN +AKR D + + I + L + YN + + +G++
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL--IPNTITYNTLVLGFCQSGKL 436
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ A E +M S PSV T+ IL
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYG-----------------------------------IL 461
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GLC+NG L A + ++ K + Y+ ++HG+C V++A+ L + +G+
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VT+N++I GL K+G + E L +MK GC P+ +Y ++ L + E
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE 581
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKL 353
L+ M S + K +I L +++L
Sbjct: 582 LIEEMKVCGFSADSSTIKMVIDMLSDRRL 610
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+++ AI+ M P+ FN + + + K Y + G G+E D +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ C L AF VL K EP+ T+STL++G C +G V EA L++RM
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
D VT + LI+GL +G+V E + L++RM G P+ +Y VL L A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+L +M + S V Y +I LC +D + +M +G + + ++G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%)
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
A KLG E D + L+ G C G + A ++D + P++ T STL++GLC KG
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V EA L++RM G D VT+ +++ L K G + L +M+ + + Y
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
V+ L F +A L M + + V+Y LI GLCN +D +L++M+ +
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 369 FVP 371
+P
Sbjct: 311 IIP 313
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 3/221 (1%)
Query: 151 LFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+FD M S C P + T+++++N AK + ++ + G+ + N L+ G C
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
++G L AA + E + P+V TY L+ GLC+ G + +A + E+M+ +
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG 491
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+NI+I G+ KV++ L + KG P+ +Y ++ GL K EA L +M
Sbjct: 492 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Query: 330 ICERMSPSFVSYKKLIHG-LCNQKLVEDVDWVLKKMVQQGF 369
+ +P +Y LI L L+ V+ ++++M GF
Sbjct: 552 KEDGCTPDDFTYNILIRAHLGGSGLISSVE-LIEEMKVCGF 591
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 111/227 (48%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + +V + N+++N L I KLG+ A N L+ GLC G
Sbjct: 114 MDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGK 173
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + +E ++ EPNV +Y+T+++GLC+ GN A + ++ME G D VT+N
Sbjct: 174 IKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNT 233
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I L K V + M+ L M +G PN +Y +++G + EA L M+
Sbjct: 234 IIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD 293
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P V+ L+ GLC + +V + V + M ++G P + + ++
Sbjct: 294 VMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALM 340
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 118/230 (51%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +S+A M P++ T+N +++ +L E + ++ + G
Sbjct: 312 GMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSY 371
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ G C++ ++ A +L E + P+ TYSTLM GLC+ G +EA + + M S
Sbjct: 372 NILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCS 431
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ + VT++IL+ G K G ++E +KLL+ M+ K PN + ++ G+ +
Sbjct: 432 YGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEV 491
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
AKEL ++ + + P+ +Y +I GL + L ++ + +KM GF+P
Sbjct: 492 AKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 541
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+I +A+E +M P+V ++N ++N L ++ + G + D
Sbjct: 172 GKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTY 231
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ LC++ + A L E + PNV TY+ ++HG C G + EA L + M
Sbjct: 232 NTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVG 291
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ DTVT IL+ GL K+G V E + E M KG PN ++Y ++ G ++ E
Sbjct: 292 RDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNE 351
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV- 380
AK++ MI + +P SY LI+G C + +++ +L +M + P + ++
Sbjct: 352 AKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQ 411
Query: 381 GCVTFGK 387
G FG+
Sbjct: 412 GLCQFGR 418
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G S A++ M C P V T+N +++ L +L + + G+ +
Sbjct: 206 TGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFT 265
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ G C G L A + E ++ P+ T + L+ GLC++G V EA + E M
Sbjct: 266 YNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMT 325
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G++ + T+N L+ G Q + E K+ E M +GC P SY ++ G +R
Sbjct: 326 EKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMD 385
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EAK L+ M + ++P V+Y L+ GLC ++ + K+M G +P +
Sbjct: 386 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNL 438
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 133/290 (45%), Gaps = 2/290 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ + PN Y IIN L + D+ ++++ + C+ D YN I
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKME-QNGCK-PDVVTYNTIIDSLCKDRL 243
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
++ A+E L +M P+V T+N +++ E ++ V D L I
Sbjct: 244 VNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTI 303
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+ G + A V + ++ EPN+ TY+ LM G C + + EA + E M +G
Sbjct: 304 LVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQG 363
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
++NILI+G K +++E LL M K P++ +Y ++ GL R EA
Sbjct: 364 CAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEAL 423
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ M + P+ V+Y L+ G C +++ +LK M ++ P +
Sbjct: 424 NIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNI 473
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I A+ + + M N PSV F L K Y + + GV + LN+
Sbjct: 69 IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ LC +++ A +L + K P T++ L++GLC +G ++EA L M G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + +++N +I+GL K G + + ++M+ GC P+ +Y ++ L + +A
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E + M+ + P+ +Y ++HG C + + + K+MV + +P
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMP 296
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 107/222 (48%)
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C P V ++N+++N ++ E + + + D + L++GLC+ G + A
Sbjct: 364 CAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEAL 423
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ E PN+ TYS L+ G C+ G+++EA LL+ M+ + ++ + V ILI G+
Sbjct: 424 NIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGM 483
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
GK+E +L ++ G P +Y ++ GLL + EA +L +M + P+
Sbjct: 484 FIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNS 543
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
SY +I G + ++ +MV + F + ++ ++
Sbjct: 544 CSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 2/270 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +Y+++I+ L + + +++++++ +F F + + G IS+A
Sbjct: 444 PDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKR--KFPHHFAQRAVLLGLFKNGNISEAR 501
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ V +N++++ V E +Y + G+ N L+ G
Sbjct: 502 NYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGF 561
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G+L A +L+ + P+V TY+TLM+ CE GN++E F L ME+ +
Sbjct: 562 CRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTH 621
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ +LI GL +Q K+ E ++LLE M KG P+S +Y ++ K +A +L
Sbjct: 622 VTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNM 681
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
M+ P+ V+YK LI+ LC ++DVD
Sbjct: 682 MLLHNCDPTQVTYKVLINALCIFGDLKDVD 711
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ + N +++ L + + K G+ D+ NILL GLC G+++ A
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+ K EP+V TY+TL G G + A ++++M +G++ D VT+ LI G +
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G +EE +KL + +G N Y +L L R EA L M R+ P F+
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKM 364
Y LIHGLC + V+ + ++M
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQM 472
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 6/257 (2%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F YN++ +AG + +A+ DM + P V T+N L L G + G
Sbjct: 305 DSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYN---TLAKGFLLLGLMSGAR 361
Query: 187 TSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
K+ G+ D L+ G C+ GN+E A + E + + NV Y+ L+ L
Sbjct: 362 KVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCL 421
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C+ G +EEA L + ME+ ++ D + ++ILI GL K+G V+ +L E+M+ K +P+
Sbjct: 422 CKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHH 481
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+ + VL GL EA+ + V Y +I G + + + K
Sbjct: 482 FAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYK 541
Query: 364 MVQQGFVPRMGMWREIV 380
M+++G P + + ++
Sbjct: 542 MIERGITPSVVTFNTLI 558
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 143/312 (45%), Gaps = 24/312 (7%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------- 140
NP+ YT +I Q IE+ + +++ E L R GF NVI + NM
Sbjct: 373 NPDLVTYTTLICGHCQMGN---IEEAL-KLRQETLSR---GFKLNVI--FYNMLLSCLCK 423
Query: 141 AGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE---I 196
GRI +A+ TLFD M + P ++++++ L G +Q Y ++ ++
Sbjct: 424 VGRIEEAL-TLFDEMETLRLEPDFIVYSILIHGLCKE---GFVQRAYQLYEQMRLKRKFP 479
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+L GL +NGN+ A D + + + +V Y+ ++ G + EA L
Sbjct: 480 HHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLY 539
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+M GI VTFN LI+G ++G + E K+LE ++ KG P+ +Y ++ +
Sbjct: 540 YKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEV 599
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
E + M + P+ V+Y LI GLC Q + + +L+ M +G +P +
Sbjct: 600 GNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTY 659
Query: 377 REIVGCVTFGKD 388
I+ C GK+
Sbjct: 660 NTIIQCFCKGKE 671
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 156/346 (45%), Gaps = 22/346 (6%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYT--LIINKLAQAKRFDAIEDI 113
LS T V + LR ++V Y +Y ++++ ++ + LA RF ++ +
Sbjct: 80 LSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKELDSV 139
Query: 114 MQRIKVEK-------LCRF---------SDGFFYNVIKIYGNMAGRISKAIETLFDMPSY 157
++ + V++ +C S+G ++++ + I A+ + M
Sbjct: 140 IKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDL 199
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
N SV T+N +LL + + + +Y G C +IL+ GLCE LE A
Sbjct: 200 NFQASVPTYN---SLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDA 256
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
L + K P++ + +T+M C+ G ++ A M G+ D+ ++NIL+ G
Sbjct: 257 ISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHG 315
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L G ++E + + M+ G P+ +Y + G L A+++V +M+ + ++P
Sbjct: 316 LCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPD 375
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
V+Y LI G C +E+ + ++ + +GF + + ++ C+
Sbjct: 376 LVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCL 421
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 115/281 (40%), Gaps = 37/281 (13%)
Query: 127 DGFFYNV-IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKL 178
D YN+ I Y + G I++A++ + M PSV TFN ++N L+ + K+
Sbjct: 515 DVVLYNIMIDGYVRLDG-IAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKM 573
Query: 179 YGEI--QGIYTSAAKLGVEIDACC--------------------------LNILLKGLCE 210
I +G+ S ++A C +L+KGLC
Sbjct: 574 LEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCR 633
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
+ + +L+ + P+ TY+T++ C+ + +A L M D VT
Sbjct: 634 QNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVT 693
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ +LI+ L G +++ +++ ++ + +Y ++ K + +A +M+
Sbjct: 694 YKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQML 753
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ S Y +I+ LC + L+ + + M+ +G P
Sbjct: 754 AKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTP 794
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 99/231 (42%), Gaps = 2/231 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G + + L +M + P+ T+ L+ L K++ +Q + AK G+ D+
Sbjct: 599 VGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAK-GLLPDSV 657
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N +++ C+ + A + + NC+P TY L++ LC G++++ ++ +
Sbjct: 658 TYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSI 717
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E I T+ +I +G+V + + +M KG + Y V+ L +
Sbjct: 718 EDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLI 777
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
EAK M+ E ++P K +++ Q V L +V+ GF+
Sbjct: 778 TEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 136/285 (47%), Gaps = 2/285 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y II+ L++A + + + I+ L D + + + G++++A
Sbjct: 417 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL--KPDAVTFGAFILGYSKTGKMTEAA 474
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +M + P+ + +++N A E I+ LGV D + + GL
Sbjct: 475 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGL 534
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+NG ++ A V E ++ P+V TYS+L+ G C++G VE+AF L + M +GI +
Sbjct: 535 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 594
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+N L+ GL K G ++ KL + M KG P+S +Y ++ G + EA L
Sbjct: 595 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 654
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
M + + P Y L+HG C + +E + ++M+Q+GF +
Sbjct: 655 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL 699
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 133/300 (44%), Gaps = 5/300 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +Y+ +I A R + ++ + + D F YN I + AG++ +A
Sbjct: 382 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVA--PDIFCYNAIISCLSKAGKMEEAS 439
Query: 149 ETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L ++ P TF +L + K+ E + G+ + +L+ G
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT-EAAKYFDEMLDHGLMPNNPLYTVLING 498
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ GNL A + P+V+T S +HGL + G V+EA + ++ +G+ D
Sbjct: 499 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T++ LISG KQG+VE+ +L + M KG PN Y ++ GL A++L
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 618
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
M + + P V+Y +I G C + V + + +M +G P ++ +V GC G
Sbjct: 619 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 678
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 127/298 (42%), Gaps = 3/298 (1%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ +L++ KR + P+ Y +IN L K +++++ L + Y+
Sbjct: 333 ALELLDEMEKR-NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL--KPNVVVYST 389
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ + GRI +A L M P + +N +++ L A E G
Sbjct: 390 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 449
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
++ DA + G + G + A DE PN Y+ L++G + GN+ EA
Sbjct: 450 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 509
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+ + + G+ D T + I GL K G+V+E +K+ +K KG P+ +Y ++ G
Sbjct: 510 SIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 569
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +A EL M + ++P+ Y L+ GLC ++ + M ++G P
Sbjct: 570 CKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 627
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 1/273 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+ Y +I A R+++A T +M P + +++ + E+ I
Sbjct: 210 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV 269
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+ I+ N+L+ GLC+ G +E A +L C+PN RT+ L+ G C + N
Sbjct: 270 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN 329
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ A LL+ ME + V++ +I+GL + KLLE+M G PN Y
Sbjct: 330 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYST 389
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + R EA+ L+ M C ++P Y +I L +E+ L ++ +G
Sbjct: 390 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 449
Query: 369 FVPRMGMWRE-IVGCVTFGKDNRNRVYVTETVD 400
P + I+G GK Y E +D
Sbjct: 450 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD 482
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 139/326 (42%), Gaps = 39/326 (11%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKR----KDYNPNEALYTLIINKLAQAKRFDA------ 109
E +F ++ +IS++ S R K PN YT+I L +AKR +
Sbjct: 174 EAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFE 233
Query: 110 -----------------IEDIMQRIKVEKLCRFSDGFF----------YNVIKIYGNMA- 141
I+ M+ ++++ R D YNV+ I+G
Sbjct: 234 EMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVL-IHGLCKF 292
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA E L M + C P+ +TF L++ G + K + A
Sbjct: 293 GKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSY 352
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++ GLC +L A +L++ +PNV YSTL+ G +G +EEA LL+ M
Sbjct: 353 GAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSC 412
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D +N +IS L K GK+EE L ++G+G P++ ++ + G + E
Sbjct: 413 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 472
Query: 322 AKELVGRMICERMSPSFVSYKKLIHG 347
A + M+ + P+ Y LI+G
Sbjct: 473 AAKYFDEMLDHGLMPNNPLYTVLING 498
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 1/238 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ T+ ++ L AK E + + K G++ D + L+ G G+++ +
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 266
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D N+ TY+ L+HGLC+ G +E+A +L+ M + G ++ TF +LI G +
Sbjct: 267 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 326
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+ + ++LL+ M+ + P++ SY ++ GL K A +L+ +M + P+ V
Sbjct: 327 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 386
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT-FGKDNRNRVYVTE 397
Y LI G ++ +E+ +L M G P + + I+ C++ GK Y+ E
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLE 444
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 145/345 (42%), Gaps = 30/345 (8%)
Query: 60 EVLKIFSNLR------DPISVISVLNQYSKR---------------KDYNPNEALYTLII 98
E LK+FS L+ D + S+++ + K+ K PN +Y ++
Sbjct: 542 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 601
Query: 99 NKLAQA---KRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
+ L ++ +R + D M +E D Y+ + + +++A +MP
Sbjct: 602 DGLCKSGDIQRARKLFDGMPEKGLE-----PDSVTYSTMIDGYCKSENVAEAFSLFHEMP 656
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
S P +N +++ + ++ + G N L+ G C++ ++
Sbjct: 657 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQ 715
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A + E + P+ TY+T++ C+ G +EEA L + M+ + DTVT+ L+
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
G K G+ E L E+M KG P+ +Y V+Y + EA +L ++ + M
Sbjct: 776 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 835
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ LI LC ++ + + +L +M + G P + +V
Sbjct: 836 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLV 880
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%)
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G +E A + E ++N + TY++LM+G + G E F L E+M ++G+ D
Sbjct: 744 CKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDE 803
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ ++I K+ + E KL + + GKG + ++ L ++ EA +L+
Sbjct: 804 VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDE 863
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + PS + L+ +++ V + + G VP
Sbjct: 864 MGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVP 906
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 98/223 (43%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+I +A + +M + P T+ V++ A E ++ + + +D
Sbjct: 713 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 772
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G + G F + ++ + +P+ TY +++ C++ N+ EAF L + + +
Sbjct: 773 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 832
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ ++LI+ L K+ + E KLL+ M G P+ A+ ++ + + EA
Sbjct: 833 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEA 892
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+ + + P + L++G N ED ++K++V
Sbjct: 893 TRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 2/231 (0%)
Query: 151 LFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
LFD M + +P V TFN VL+ L E + K G+ ++ NI ++GLC
Sbjct: 102 LFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLC 161
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
E G LE A +++ P+V TY+TLM GLC+ V+EA L RM ++G D
Sbjct: 162 EGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDF 220
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+N +I G K+ ++E +LL+ KG P+ +Y ++ GL + A EL
Sbjct: 221 TYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEA 280
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P V Y L+ GLC Q L+ V+ +MV+ G P + + ++
Sbjct: 281 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVI 331
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 7/304 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L + ++++ ++ Y P+ Y ++ L + + ++R+ + + C D
Sbjct: 166 LEEAVALVESMDAYIA-----PDVVTYNTLMRGLCKDSKVQEAAQYLRRM-MNQGC-IPD 218
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F YN I + +A E L D P T+ ++N L + ++
Sbjct: 219 DFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFN 278
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
A ++ D N L+KGLC G + A V++E + C P++ TY+ +++GLC+ G
Sbjct: 279 EAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMG 338
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
N+ +A ++ +G D TFN +I G K+ K++ ++L+ERM G P++ +Y
Sbjct: 339 NISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYN 398
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
VL GL + E E MI + P+ ++Y LI C +E+ V+ +M Q
Sbjct: 399 SVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQD 458
Query: 368 GFVP 371
G VP
Sbjct: 459 GLVP 462
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 6/301 (1%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
++ KD P+ +Y ++ L + +M + VE C D + YN++
Sbjct: 280 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM-VEDGCH-PDIWTYNIVINGLCKM 337
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS-AKLYGEIQGIYTSAAKLGVEIDACC 200
G IS A + D P V TFN +++ KL +Q + G+ DA
Sbjct: 338 GNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQ-LVERMWMYGIAPDAIT 396
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N +L GLC+ G + +E + C PN TY+ L+ C+ +EEA G++ RM
Sbjct: 397 YNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMS 456
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK-RF 319
+G+ DT++FN LI G + G ++ L +++ KG Y +A +L G K
Sbjct: 457 QDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKG-YSATADTFNILIGAYSSKLNM 515
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A+++ G MI + P +Y+ L+ G C V+ L +MV +GFVP M + +
Sbjct: 516 QMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRV 575
Query: 380 V 380
+
Sbjct: 576 L 576
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 121/240 (50%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A+E + + + P + +N ++ L L + + G D
Sbjct: 268 GDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTY 327
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NI++ GLC+ GN+ A V+++ + P+V T++T++ G C++ ++ A L+ERM
Sbjct: 328 NIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWM 387
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
GI D +T+N +++GL K GK +E + E M KGC PN+ +Y ++ + E
Sbjct: 388 YGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 447
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A ++ RM + + P +S+ LIHG C ++ + +K+ ++G+ + ++G
Sbjct: 448 ASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIG 507
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 114/253 (45%), Gaps = 36/253 (14%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + C P+ +N +++ LV+ + + +Y GV DA + +K C G
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 214 LEAAFYVLDEFPKQNCE-----------------------------------PNVRTYST 238
A +L P++ C+ P+V T++
Sbjct: 61 PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++H LC+KG++ E+ LL ++ G+ + T NI I GL + G++EE + L+E M
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY- 179
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
P+ +Y ++ GL + EA + + RM+ + P +Y +I G C + ++++
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239
Query: 359 WVLKKMVQQGFVP 371
+LK + +GFVP
Sbjct: 240 ELLKDAIFKGFVP 252
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 127/286 (44%), Gaps = 2/286 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y ++IN L + +M V+ D F +N + ++ A
Sbjct: 321 HPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGY--LPDVFTFNTMIDGYCKRLKLDSA 378
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ + M Y P T+N VLN L A E+ + G +A NIL++
Sbjct: 379 LQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIEN 438
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ LE A V+ + P+ +++TL+HG C G+++ A+ L ++++ +G A
Sbjct: 439 FCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSAT 498
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TFNILI + ++ K+ M KG P+ +Y+ ++ G A +
Sbjct: 499 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLA 558
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
M+ + PS ++ ++++ L V + ++ MV+ G VP +
Sbjct: 559 EMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEV 604
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 117/268 (43%), Gaps = 2/268 (0%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
IS +V+ + K Y P+ + +I+ + + D+ +++R+ + + D Y
Sbjct: 340 ISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIA--PDAITY 397
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + AG+ + ET +M C P+ T+N+++ E G+ ++
Sbjct: 398 NSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQ 457
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ D N L+ G C NG+L+ A+ + + ++ T++ L+ K N++
Sbjct: 458 DGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQM 517
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A + M S+G D T+ +L+ G K V+ L M KG P+ A++ VL
Sbjct: 518 AEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLN 577
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFV 339
L R EA ++ M+ + P V
Sbjct: 578 SLAMNHRVSEAVAIIHIMVRMGVVPEVV 605
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 134/304 (44%), Gaps = 38/304 (12%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS--------DGF-----FYNV 133
Y P+ + +IN Q R D++ +++ E C+ DGF N
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFGAVDLVSKME-EMRCKLDVVIYNTIIDGFCKTGLVNNA 193
Query: 134 IKIYGNM---------------------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
+ ++G M +GR S A + DM + P+V TF ++N
Sbjct: 194 LVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINA 253
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
V + E + Y + ++ D N ++ GLC +G ++ A +LD + C P+
Sbjct: 254 FVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPD 313
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
V TY+TL++G C+ V+E L+ M G+ DTVTFN +I G + G+ + ++
Sbjct: 314 VVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFS 373
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
RM G PN +Y +LYGL R +A L M M +Y +IHG+C
Sbjct: 374 RM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIG 430
Query: 353 LVED 356
VED
Sbjct: 431 NVED 434
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 109/216 (50%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+N+V+N L + + K G E D ++ L+ G C+ + A ++ +
Sbjct: 106 TYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKM 165
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ C+ +V Y+T++ G C+ G V A L RME +G+ ADTVT+N L++GL G+
Sbjct: 166 EEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRR 225
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ +L+ M + PN ++ ++ + + +F EAK+ MI + P +Y +
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSM 285
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
IHGLC V++ +L MV +G P + + ++
Sbjct: 286 IHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLI 321
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 127/252 (50%), Gaps = 19/252 (7%)
Query: 85 KDYNPNEALYTLIIN------KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG 138
+D PN +T +IN K +AK+F E++++R C D F YN + I+G
Sbjct: 238 RDIVPNVITFTALINAFVREGKFLEAKKF--YEEMIRR------CIDPDVFTYNSM-IHG 288
Query: 139 -NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
M G++ +A + L M + C+P V T+N ++N K E + ++ G+ +D
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVD 348
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N +++G + G +AA + F + PN+RTYS L++GLC VE+A L E
Sbjct: 349 TVTFNTIIQGYFQAGRPDAAQEI---FSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFE 405
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M+ ++ D T+NI+I G+ G VE+ L + KG P+ +Y ++ G K+
Sbjct: 406 SMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKR 465
Query: 318 RFPEAKELVGRM 329
+ +A L +M
Sbjct: 466 LWDKADFLYRKM 477
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 134/298 (44%), Gaps = 14/298 (4%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYT--LIINKLAQAKRFDAIEDIM 114
S E K+ SN+ + V++ + + LYT ++IN L + RF ++
Sbjct: 68 SIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRF-----VI 122
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLV 169
V K+ +F G+ +V+ + + G R+ A++ + M C V +N +
Sbjct: 123 ALSVVGKMMKF--GYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTI 180
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
++ L ++ + GV D N L+ GLC +G A ++ + ++
Sbjct: 181 IDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDI 240
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
PNV T++ L++ +G EA E M ID D T+N +I GL G+V+E +
Sbjct: 241 VPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQ 300
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+L+ M KGC+P+ +Y ++ G KR E +LV M + V++ +I G
Sbjct: 301 ILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQG 358
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%)
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
NL+ A + + P++ +S L+ + + N + L ME GI D T+N
Sbjct: 49 NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
I+I+ L + + + ++ +M G P+ + ++ G R A +LV +M
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
R V Y +I G C LV + + +M + G
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDG 204
>gi|224076660|ref|XP_002304977.1| predicted protein [Populus trichocarpa]
gi|222847941|gb|EEE85488.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 149/274 (54%), Gaps = 5/274 (1%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK-VEKLCRFSDGFFYN 132
++ + S+ + + A+Y I +LA AK+F +E+I++ K + + + +GF
Sbjct: 42 LVEKFKKASENERFRTKSAIYKDTIRRLAAAKKFRYVEEILENQKQYQDMSK--EGFNAR 99
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS-AAK 191
+I +YG+ +G A + +M C +V +FN +L V++K + E+ G++ + +
Sbjct: 100 LISLYGS-SGMFDNARKVFDEMLERKCARTVLSFNALLGACVNSKKFDEVGGLFRGLSEE 158
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
L +E D N ++K CE G+L++A +LDE K+ +P++ T++TL++GL G +
Sbjct: 159 LEIEPDLVSYNTVMKAFCEMGSLDSAVSLLDEIEKKGLKPDLITFNTLLNGLYANGRFDA 218
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
+ +RM+ + + D ++N + GL + ++++ K++E MK +G + SY ++
Sbjct: 219 GERIWQRMKEKNVKPDGRSYNEKLLGLALEKRMKDATKVVEEMKSEGIEFDIFSYNALIR 278
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
G +++ EAK G + + P +++K LI
Sbjct: 279 GFVNEGDLEEAKGWYGEIRKSDIKPDKLTFKTLI 312
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 3/234 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKAIETLF 152
+ ++ +K+FD + + + + E+L D YN V+K + M G + A+ L
Sbjct: 132 FNALLGACVNSKKFDEVGGLFRGLS-EELEIEPDLVSYNTVMKAFCEM-GSLDSAVSLLD 189
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
++ P + TFN +LN L + + + I+ + V+ D N L GL
Sbjct: 190 EIEKKGLKPDLITFNTLLNGLYANGRFDAGERIWQRMKEKNVKPDGRSYNEKLLGLALEK 249
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
++ A V++E + E ++ +Y+ L+ G +G++EEA G + I D +TF
Sbjct: 250 RMKDATKVVEEMKSEGIEFDIFSYNALIRGFVNEGDLEEAKGWYGEIRKSDIKPDKLTFK 309
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
LI + ++G V L + A Q VL L + + EAKELV
Sbjct: 310 TLIPFVVEKGDVAFAFDLCKDALSSKLAVKEALIQPVLDALAKESKINEAKELV 363
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 38/244 (15%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D +S V+K F + S +S+L++ K K P+ + ++N L RFDA E I
Sbjct: 164 DLVSYNTVMKAFCEMGSLDSAVSLLDEIEK-KGLKPDLITFNTLLNGLYANGRFDAGERI 222
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
QR+K EK + DG YN + + R+ A + + +M S
Sbjct: 223 WQRMK-EKNVK-PDGRSYNEKLLGLALEKRMKDATKVVEEMKSE---------------- 264
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
G+E D N L++G G+LE A E K + +P+
Sbjct: 265 -------------------GIEFDIFSYNALIRGFVNEGDLEEAKGWYGEIRKSDIKPDK 305
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
T+ TL+ + EKG+V AF L + S + ++ L K+ K+ E +L+E
Sbjct: 306 LTFKTLIPFVVEKGDVAFAFDLCKDALSSKLAVKEALIQPVLDALAKESKINEAKELVEL 365
Query: 294 MKGK 297
K +
Sbjct: 366 SKAR 369
>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 135/296 (45%), Gaps = 10/296 (3%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q K + PN +Y +++ L + +M IK + +NV+
Sbjct: 176 LLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE------PNDVTFNVLICG 229
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+A+ L S P V T V+ +L + E I G +D
Sbjct: 230 YCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVD 289
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+KG C+ G ++ +L E ++ C PN TY+ L+ G CE G +E A +
Sbjct: 290 VVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFN 349
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM-KGKG-CYPNSASYQEVLYGLLD 315
M+++GI+ + VTF+ LI GL +G+ E+G K+LE M + +G C + + Y VLYGL
Sbjct: 350 DMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYR 409
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K EA E + +M E + P V I G C + +++ V +M +G +P
Sbjct: 410 KNMLNEALEFLMKM--ENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIP 463
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 5/299 (1%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
SK ++ +++ Y +I+KL +RF ++ ++ + + F +I+ G A
Sbjct: 39 SKLPNFTHSQSTYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGR-A 97
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
I I+ L + Y PS+K FN +L++LV + + G++ D
Sbjct: 98 RMIRDVIKVLDLVTRYGKNPSLKIFNSILDVLVKEDIDLARKFYRKKMMGAGIQGDDYTY 157
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
IL+KGLC + F +L + +PNV Y+TL+H LC G V A L+ ++
Sbjct: 158 GILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIK- 216
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + VTFN+LI G K+ + + LLE+ G P+ + +V+ L + R E
Sbjct: 217 ---EPNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTE 273
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E++ R+ + V++ LI G C V+ +LK+M ++G +P + ++
Sbjct: 274 AVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALI 332
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 143/302 (47%), Gaps = 20/302 (6%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI-----MQRIKVEKL 122
+RD I V+ ++ +Y K NP+ ++ I++ L + EDI R K+
Sbjct: 100 IRDVIKVLDLVTRYGK----NPSLKIFNSILDVLVK-------EDIDLARKFYRKKMMGA 148
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
D + Y ++ + RI + + L + S P+V +N +L+ L + G
Sbjct: 149 GIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRA 208
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ + E + N+L+ G C+ N A +L++ P+V T + ++
Sbjct: 209 RSLMNEIK----EPNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEI 264
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC G V EA +LER+ES+G D V N LI G K GKV+ G LL+ M+ KGC PN
Sbjct: 265 LCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPN 324
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+ +Y ++ G + A ++ M + ++ +FV++ LI GL ++ ED +L+
Sbjct: 325 ADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILE 384
Query: 363 KM 364
M
Sbjct: 385 LM 386
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 122/272 (44%), Gaps = 8/272 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL-CRFSDGFFYNVIKIYGNMA 141
+RK PN Y +I+ ++ ++ D+ +K + + C F F +IK +
Sbjct: 317 ERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVT--FDTLIKGLFS-R 373
Query: 142 GRISKAIETLFDMPSYN--CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
GR + L M C S+ +N VL L + E L
Sbjct: 374 GRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKMENLFPRAVDR 433
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
L IL G CE G ++ A V D+ + P+ Y L+HG C++G V EA L+ M
Sbjct: 434 SLRIL--GFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEM 491
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G TFN LISG + GK +KLLE M G+GC P++ SY ++ L KK F
Sbjct: 492 VFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSF 551
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+A L+ +M+ ++P ++ + L H L Q
Sbjct: 552 QKAASLLLQMVENGITPDYLIWNSLFHCLSQQ 583
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 142/343 (41%), Gaps = 37/343 (10%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL + S + P+ T ++ L R +I++R VE D +N +
Sbjct: 241 VLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILER--VESKGGVVDVVAHNTLIK 298
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G++ L +M C P+ T+N +++ + + ++ G+
Sbjct: 299 GFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINC 358
Query: 197 DACCLNILLKGLCENGNLEAAFYVLD--EFPKQNCEPNVRTYSTLMHGL----------- 243
+ + L+KGL G E F +L+ E + C ++ Y+++++GL
Sbjct: 359 NFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALE 418
Query: 244 ----------------------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
CE+G ++EA + ++M +EG + ++ LI G ++
Sbjct: 419 FLMKMENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQE 478
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G V E ++L+ M G +P ++++ ++ G + A +L+ M+ P SY
Sbjct: 479 GCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSY 538
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
LI LC +K + +L +MV+ G P +W + C++
Sbjct: 539 SPLIDALCRKKSFQKAASLLLQMVENGITPDYLIWNSLFHCLS 581
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 131/267 (49%), Gaps = 4/267 (1%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
A Y L+++ L R ++++ + + L D F YN++ G + KA+E
Sbjct: 622 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLA--PDVFTYNILINGHCKEGNVKKALEIF 679
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+M +V T+ ++ L E ++ A + G+ D N L+ +
Sbjct: 680 ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 739
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
GN++ AF ++ E K+ P+ TY+TLM GLC G V+EA L++ M GI D VT+
Sbjct: 740 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 799
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N LISG +G V++ +++ M KG P +Y ++ GL + +A+ +V M+
Sbjct: 800 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 859
Query: 332 ERMSPSFVSYKKLIHGLC--NQKLVED 356
++P +Y LI GL +++ ++D
Sbjct: 860 NGITPDDSTYISLIEGLTTEDERAIDD 886
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 140/298 (46%), Gaps = 2/298 (0%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ V ++ + + P +Y +I + D R+ VE+ + YN+
Sbjct: 569 AVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM-VERGVAMTVAT-YNL 626
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ M GR ++A E + +M P V T+N+++N + I+ + ++ G
Sbjct: 627 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 686
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
V L+ L + G ++ + DE ++ P++ Y+ L++ GN++ AF
Sbjct: 687 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 746
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
++ ME + I D VT+N L+ GL G+V+E KL++ M +G P+ +Y ++ G
Sbjct: 747 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 806
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K +A + M+ + +P+ ++Y LI GLC +D + ++K+MV+ G P
Sbjct: 807 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 864
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 154/332 (46%), Gaps = 19/332 (5%)
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
P + +L Q + PN Y +I R A DIM+ ++ E+ + +
Sbjct: 499 PARALELLRQMPR-----PNAVTYNTVIAGFCSRGRVQAALDIMREMR-ERGGIAPNQYT 552
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA- 189
Y + GR+ +A++ +M + VK ++ N L+ Y + QG +A
Sbjct: 553 YGTVISGWCKVGRVDEAVKVFDEMLTKG---EVKPEAVMYNALIGG--YCD-QGKLDTAL 606
Query: 190 ------AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ GV + N+L+ L +G A+ +++E + P+V TY+ L++G
Sbjct: 607 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 666
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C++GNV++A + E M G+ A VT+ LI L K+G+V+E KL + +G P+
Sbjct: 667 CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 726
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
Y ++ A E++G M +R++P V+Y L+ GLC V++ ++ +
Sbjct: 727 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 786
Query: 364 MVQQGFVPRMGMWREIVGCVTFGKDNRNRVYV 395
M ++G P + + ++ + D ++ + +
Sbjct: 787 MTERGIQPDLVTYNTLISGYSMKGDVKDALRI 818
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 146/330 (44%), Gaps = 2/330 (0%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ + ++ + +R PN+ Y +I+ + R D + + + + +
Sbjct: 532 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 591
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+I Y + G++ A+ M +V T+NL+++ L E +
Sbjct: 592 LIGGYCDQ-GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 650
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+ D NIL+ G C+ GN++ A + + ++ V TY+ L++ L +KG V+E
Sbjct: 651 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 710
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L + GI D V +N LI+ G ++ +++ M+ K P+ +Y ++ G
Sbjct: 711 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 770
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L R EA++L+ M + P V+Y LI G + V+D + +M+ +GF P
Sbjct: 771 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 830
Query: 373 MGMWREIV-GCVTFGKDNRNRVYVTETVDS 401
+ + ++ G G+ + V E V++
Sbjct: 831 LLTYNALIQGLCKNGQGDDAENMVKEMVEN 860
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 10/212 (4%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S + + +L+ L SA + ++ +L + + NI+L+ LC G A +L
Sbjct: 451 STASLHPLLSALPSAPAFA----LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELL 506
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFNILISGLRK 280
+ P+ PN TY+T++ G C +G V+ A ++ M E GI + T+ +ISG K
Sbjct: 507 RQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 562
Query: 281 QGKVEEGMKLLERMKGKG-CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
G+V+E +K+ + M KG P + Y ++ G D+ + A RM+ ++ +
Sbjct: 563 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 622
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y L+H L + ++++M +G P
Sbjct: 623 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 654
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+H L AF L M + T TFNI++ L GK ++LL +M
Sbjct: 455 LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP---- 510
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICER--MSPSFVSYKKLIHGLCNQKLVEDV 357
PN+ +Y V+ G + R A +++ R + ER ++P+ +Y +I G C V++
Sbjct: 511 RPNAVTYNTVIAGFCSRGRVQAALDIM-REMRERGGIAPNQYTYGTVISGWCKVGRVDEA 569
Query: 358 DWVLKKMVQQGFV-PRMGMWREIVG 381
V +M+ +G V P M+ ++G
Sbjct: 570 VKVFDEMLTKGEVKPEAVMYNALIG 594
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 116/223 (52%), Gaps = 5/223 (2%)
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIY--TSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
+P+VKT +L+ LV A E++ Y + GV D + + C+ G +E A
Sbjct: 209 FPTVKTCTFLLSSLVKAN---ELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDA 265
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+ + K PNV TY+ L+HGLC+ GN++EAF E+M +G++A +T+++LI+G
Sbjct: 266 IQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLING 325
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L K K E +L+ KG PN Y ++ G +A + G M+ + ++P+
Sbjct: 326 LMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPN 385
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+ +I G C +E + +L++M+ +GF G + I+
Sbjct: 386 SVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTII 428
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 141/299 (47%), Gaps = 6/299 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA--G 142
+ ++ N +T II+ L RF++ ++ + + + R +DG ++ G + G
Sbjct: 415 RGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM-RPNDGLLTTLV---GGLCKEG 470
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ S A+E F + ++ T N +++ L E + + G +D N
Sbjct: 471 KHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYN 530
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G +E F + E KQ EP+ TY+ L+HG+C G ++EA L +S
Sbjct: 531 TLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR 590
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ + T+ ++I G K K+EEG KL + + NS Y ++ EA
Sbjct: 591 DLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEA 650
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+L M + + P+ +Y LIHG+CN +ED ++ +M ++G +P + + ++G
Sbjct: 651 FKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIG 709
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 125/244 (51%), Gaps = 2/244 (0%)
Query: 127 DGFFYNVIKIYGNM-AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D F YN++ I+G G++ +A+ + S + P+V T+ ++++ A E + +
Sbjct: 560 DTFTYNLL-IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 618
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+T +E+++ N L++ C NGN AF + D+ + P TYS+L+HG+C
Sbjct: 619 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN 678
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G +E+A L++ M EG+ + V + LI G K G++++ + +L+ M +PN +
Sbjct: 679 IGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKIT 738
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G A +L+ M+ + + P V+Y L +G C + +E+ + M
Sbjct: 739 YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMS 798
Query: 366 QQGF 369
Q+G
Sbjct: 799 QEGL 802
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 14/286 (4%)
Query: 85 KDYNPNEALYTLIINKLA-QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYG- 138
++ PN+ L T ++ L + K DA+E + ++ GF N++ I+G
Sbjct: 450 RNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLE--------KGFGANLVTTNALIHGL 501
Query: 139 NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
G + +A+ L M T+N +++ E + K G+E D
Sbjct: 502 CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDT 561
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N+L+ G+C G L+ A + +E ++ PNV TY ++ G C+ +EE L
Sbjct: 562 FTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTE 621
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
+ ++ ++ ++V +N LI + G E KL + M+ KG P +A+Y +++G+ + R
Sbjct: 622 LLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGR 681
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+AK L+ M E + P+ V Y LI G C ++ V VL++M
Sbjct: 682 MEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 727
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 129/268 (48%), Gaps = 4/268 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+++IN L + ++F+ +++ +EK ++ + +I Y M G + A+ D
Sbjct: 319 YSVLINGLMKLEKFNEANSVLKE-TLEKGFTPNEVVYNTLIDGYCKM-GNLGDALRIRGD 376
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S P+ T N ++ + + I G I+ ++ LC N
Sbjct: 377 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 436
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
E+A L E +N PN +TL+ GLC++G +A L R+ +G A+ VT N
Sbjct: 437 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNA 496
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI GL K G ++E ++LL++M +G + +Y ++ G + + E +L G M+ +
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556
Query: 334 MSPSFVSYKKLIHGLCN-QKLVEDVD-W 359
+ P +Y LIHG+C KL E V+ W
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLW 584
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 144/309 (46%), Gaps = 7/309 (2%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI-KVEKLCRFSDGFFYNVIKIYGNM 140
+ R+ +P+ L++ IN + + +ED +Q +EKL + YN + I+G
Sbjct: 237 TMRQGVSPDVYLFSTAINAFCKGGK---VEDAIQLFFDMEKLGVSPNVVTYNNL-IHGLC 292
Query: 141 A-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G + +A M ++ T+++++N L+ + + E + + G +
Sbjct: 293 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 352
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ G C+ GNL A + + + PN T ++++ G C+ G +E+A +LE M
Sbjct: 353 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 412
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S G + F +I L + E ++ L M + PN ++ GL + +
Sbjct: 413 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 472
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+A EL R++ + + V+ LIHGLC +++ +LKKM+++GFV + +
Sbjct: 473 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 532
Query: 380 V-GCVTFGK 387
+ GC GK
Sbjct: 533 ISGCCKEGK 541
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 108/245 (44%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN + G++ + + +M P T+NL+++ + E ++
Sbjct: 525 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 584
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ + +++ G C+ +E + E QN E N Y+TL+ C
Sbjct: 585 NECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRN 644
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
GN EAF L + M S+GI T T++ LI G+ G++E+ L++ M+ +G PN Y
Sbjct: 645 GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 704
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ G + + ++ M + P+ ++Y +I G ++ +L +MV
Sbjct: 705 TALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVG 764
Query: 367 QGFVP 371
+G VP
Sbjct: 765 KGIVP 769
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 151/314 (48%), Gaps = 3/314 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN ++ +IN L R +++ R+ ++ D N + ++G+ ++
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMV--EMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ + M Y C P+ T+ VLN++ + + + +++DA +I++
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC++G+L+ AF + +E + N+ TY+ L+ G C G ++ LL M I+
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ VTF++LI K+GK+ E +L + M +G P++ +Y ++ G + +A ++V
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTF 385
M+ + P+ ++ LI+G C ++D + +KM +G V + ++ G
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 386 GKDNRNRVYVTETV 399
GK N + E V
Sbjct: 452 GKLNVAKELFQEMV 465
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 141/288 (48%), Gaps = 2/288 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y++II+ L + D ++ ++++ + ++ YN++ AGR + L D
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGIT--TNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P+V TF+++++ V E + ++ G+ D L+ G C+ +
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A ++D + C+PN+RT++ L++G C+ +++ L +M G+ ADTVT+N
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G + GK+ +L + M + PN +Y+ +L GL D +A E+ ++ +
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
M Y +IHG+CN V+D + + +G P + + ++G
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 112/235 (47%)
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
AI+ DM P+V F+ + + + K Y + + G+ + L+I++
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
C L AF + + K EPN T+STL++GLC +G V EA L++RM G
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D +T N L++GL GK E M L+++M GC PN+ +Y VL + + A EL+
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+M + V Y +I GLC +++ + +M +G + + ++G
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 124/271 (45%), Gaps = 3/271 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+L KRK NPN ++++I+ + + E++ + + + D Y +
Sbjct: 320 LLRDMIKRK-INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA--PDTITYTSLID 376
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ KA + + M S C P+++TFN+++N A + ++ + GV
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L++G CE G L A + E + PN+ TY L+ GLC+ G E+A +
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E++E ++ D +NI+I G+ KV++ L + KG P +Y ++ GL K
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
EA+ L +M + +P +Y LI
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 119/238 (50%), Gaps = 5/238 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +PN + ++IN +A R D ++ +++ + + +D YN + G++
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV--VADTVTYNTLIQGFCELGKL 454
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ A E +M S P++ T+ ++L+ L + I+ K +E+D NI+
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G+C ++ A+ + P + +P V+TY+ ++ GLC+KG + EA L +ME +G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD---KKRF 319
D T+NILI G + +KL+E +K G ++++ + V+ L D KK F
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSF 632
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 113/250 (45%), Gaps = 23/250 (9%)
Query: 145 SKAIETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA------------- 190
S+ + T+ D ++ K ++LVL L +L G +YT +
Sbjct: 82 SRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCL 141
Query: 191 ---------KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
KLG E + + L+ GLC G + A ++D + +P++ T +TL++
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GLC G EA L+++M G + VT+ +++ + K G+ M+LL +M+ +
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
++ Y ++ GL A L M + ++ + ++Y LI G CN +D +L
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 362 KKMVQQGFVP 371
+ M+++ P
Sbjct: 322 RDMIKRKINP 331
>gi|357516331|ref|XP_003628454.1| hypothetical protein MTR_8g058400, partial [Medicago truncatula]
gi|355522476|gb|AET02930.1| hypothetical protein MTR_8g058400, partial [Medicago truncatula]
Length = 303
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 138/300 (46%), Gaps = 40/300 (13%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+SP + + + +DP + + + Y + Y LII KL +AK +E I+Q
Sbjct: 7 ISPFRLSSLLRSQKDPSLAFQIF--LNPQNHYRYSILSYDLIITKLGRAKMIPQMELILQ 64
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
++ + R + +VI Y A S+A++T +PS+ C P++K+FN +LN L++
Sbjct: 65 QLHNDTRHRVPEPLLCHVISFYAR-ARLPSRAVQTFLSIPSFRCTPTLKSFNSLLNALLT 123
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ + I + ++ G + C NIL++ G + A + DE + N P+ T
Sbjct: 124 CRRFQTITHFASRLSEFGPP-NTCTYNILIRSCFFQGRTDRALELFDEMRRTNVCPDQVT 182
Query: 236 YSTLMHGLCEKGNVEEAFGL-----------------------------LER-------M 259
+ TL+HGLC+ + +AFG+ L R M
Sbjct: 183 FGTLIHGLCKDSRMHQAFGMKKLMIQEFKLKPCVSVYTNLMKGVCEIGELHRAFEIKDEM 242
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E G+ D V +N L++ L K G+ EE +++LE MK G + NS + ++ +K F
Sbjct: 243 ERNGLRLDVVVYNTLVNALFKAGRKEEALRVLEEMKESGYHWNSVTCNVMIGEFCRQKNF 302
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
+P+VKT +L+ LV A + ++ + + GV D + + C+ G +E A
Sbjct: 276 FPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQ 334
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + K PNV TY+ L+HGLC+ GN++EAF E+M +G++A +T+++LI+GL
Sbjct: 335 LFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLM 394
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K K E +L+ KG PN Y ++ G +A + G M+ + ++P+ V
Sbjct: 395 KLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSV 454
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ +I G C +E + +L++M+ +GF G + I+
Sbjct: 455 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTII 495
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 141/299 (47%), Gaps = 6/299 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA--G 142
+ ++ N +T II+ L RF++ ++ + + + R +DG ++ G + G
Sbjct: 482 RGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM-RPNDGLLTTLV---GGLCKEG 537
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ S A+E F + ++ T N +++ L E + + G +D N
Sbjct: 538 KHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYN 597
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G +E F + E KQ EP+ TY+ L+HG+C G ++EA L +S
Sbjct: 598 TLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR 657
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ + T+ ++I G K K+EEG KL + + NS Y ++ EA
Sbjct: 658 DLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEA 717
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+L M + + P+ +Y LIHG+CN +ED ++ +M ++G +P + + ++G
Sbjct: 718 FKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIG 776
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 120/231 (51%), Gaps = 2/231 (0%)
Query: 127 DGFFYNVIKIYGNM-AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D F YN++ I+G G++ +A+ + S + P+V T+ ++++ A E + +
Sbjct: 627 DTFTYNLL-IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 685
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+T +E+++ N L++ C NGN AF + D+ + P TYS+L+HG+C
Sbjct: 686 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN 745
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G +E+A L++ M EG+ + V + LI G K G++++ + +L+ M +PN +
Sbjct: 746 IGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKIT 805
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
Y ++ G A +L+ M+ + + P V+Y L +G C + +E+
Sbjct: 806 YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 856
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 14/286 (4%)
Query: 85 KDYNPNEALYTLIINKLA-QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYG- 138
++ PN+ L T ++ L + K DA+E + ++ GF N++ I+G
Sbjct: 517 RNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLE--------KGFGANLVTTNALIHGL 568
Query: 139 NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
G + +A+ L M T+N +++ E + K G+E D
Sbjct: 569 CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDT 628
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N+L+ G+C G L+ A + +E ++ PNV TY ++ G C+ +EE L
Sbjct: 629 FTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTE 688
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
+ ++ ++ ++V +N LI + G E KL + M+ KG P +A+Y +++G+ + R
Sbjct: 689 LLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGR 748
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+AK L+ M E + P+ V Y LI G C ++ V VL++M
Sbjct: 749 MEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 794
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 3/266 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+++IN L + ++F+ +++ +EK ++ + +I Y M G + A+ D
Sbjct: 386 YSVLINGLMKLEKFNEANSVLKE-TLEKGFTPNEVVYNTLIDGYCKM-GNLGDALRIRGD 443
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S P+ T N ++ + + I G I+ ++ LC N
Sbjct: 444 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 503
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
E+A L E +N PN +TL+ GLC++G +A L R+ +G A+ VT N
Sbjct: 504 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNA 563
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI GL K G ++E ++LL++M +G + +Y ++ G + + E +L G M+ +
Sbjct: 564 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 623
Query: 334 MSPSFVSYKKLIHGLCN-QKLVEDVD 358
+ P +Y LIHG+C KL E V+
Sbjct: 624 IEPDTFTYNLLIHGMCRIGKLDEAVN 649
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 144/309 (46%), Gaps = 7/309 (2%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI-KVEKLCRFSDGFFYNVIKIYGNM 140
+ R+ +P+ L++ IN + + +ED +Q +EKL + YN + I+G
Sbjct: 304 TMRQGVSPDVYLFSTAINAFCKGGK---VEDAIQLFFDMEKLGVSPNVVTYNNL-IHGLC 359
Query: 141 A-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G + +A M ++ T+++++N L+ + + E + + G +
Sbjct: 360 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 419
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ G C+ GNL A + + + PN T ++++ G C+ G +E+A +LE M
Sbjct: 420 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 479
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S G + F +I L + E ++ L M + PN ++ GL + +
Sbjct: 480 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 539
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+A EL R++ + + V+ LIHGLC +++ +LKKM+++GFV + +
Sbjct: 540 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 599
Query: 380 V-GCVTFGK 387
+ GC GK
Sbjct: 600 ISGCCKEGK 608
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 108/245 (44%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN + G++ + + +M P T+NL+++ + E ++
Sbjct: 592 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 651
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ + +++ G C+ +E + E QN E N Y+TL+ C
Sbjct: 652 NECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRN 711
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
GN EAF L + M S+GI T T++ LI G+ G++E+ L++ M+ +G PN Y
Sbjct: 712 GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 771
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ G + + ++ M + P+ ++Y +I G ++ +L +MV
Sbjct: 772 TALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVG 831
Query: 367 QGFVP 371
+G VP
Sbjct: 832 KGIVP 836
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 2/210 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K +D PN Y ++I+ +A + + E + + + L + + +I+ Y G
Sbjct: 655 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL-ELNSVVYNTLIRAYCR-NG 712
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+A + DM S P+ T++ +++ + + + + + K G+ + C
Sbjct: 713 NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYT 772
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G ++ VL E + PN TY+ ++ G + G+++ A LL M +
Sbjct: 773 ALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 832
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLE 292
GI DTVT+N+L +G K+GK+EEG L E
Sbjct: 833 GIVPDTVTYNVLTNGFCKEGKIEEGKLLAE 862
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 3/289 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R PN Y +++ L R + ++ ++ + YN + AG
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCA--PNAVTYNTLVAAFCRAGE 202
Query: 144 ISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A + M N P++ TFN ++N L A + ++ + G+ D N
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
LL G C+ G L + V E ++ P+V T+++L+H C+ GN+E+A L+ +M
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + VTF LI G K+G +++ + +E M+ G P+ Y ++ G R A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+EL+ M +R+ P V+Y +I G C ++ + +KM+++G +P
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 431
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 143/298 (47%), Gaps = 5/298 (1%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
V+S++ + K PN + ++N L +A R + + + E L D YN
Sbjct: 209 VVSLMREEGNAK---PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLA--PDVVSYNT 263
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ G + +++ +M P V TF +++ A + + + G
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ ++ L+ G C+ G L+ A ++E K +P+V Y+ L++G C+ G ++ A
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L+ ME++ + D VT++ +ISG K G ++ +L ++M KG P++ +Y ++ GL
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++KR +A EL M+ + P +Y LI G C + VE + +M+++G +P
Sbjct: 444 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 501
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 2/210 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PSV +N VL L A L + +S + GV + NIL++ LC G LE A V
Sbjct: 116 PSVPAYNAVLLALSDASL-PSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-IDADTVTFNILISGLR 279
+ + C PN TY+TL+ C G ++ A ++ M EG + VTFN +++GL
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K G++E K+ + M +G P+ SY +L G E+ + M + P V
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
++ LIH C +E ++ +M ++G
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGL 324
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 144/317 (45%), Gaps = 21/317 (6%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L + ++V S + Q + P+ +T +I+ +A + ++ +++ E+ R ++
Sbjct: 274 LHESLAVFSEMTQ----RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR-ERGLRMNE 328
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F +I + G + A+ + +M PSV +N ++N + +
Sbjct: 329 VTFTALIDGFCK-KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 387
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
V+ D + ++ G C+ GNL++AF + + K+ P+ TYS+L+ GLCE+
Sbjct: 388 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 447
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+ +A L E M G+ D T+ LI G K+G VE+ + L + M KG P+ +Y
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 507
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK---------------KLIHGLCNQK 352
++ GL R EA L+ ++ E P + Y L+ G C +
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 353 LVEDVDWVLKKMVQQGF 369
L+++ D V + M+ + +
Sbjct: 568 LMKEADKVYQSMLDRNW 584
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 88/171 (51%), Gaps = 1/171 (0%)
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
+ +L +A L + PNV TY+ L+ LC +G +EEA G++ M G + VT
Sbjct: 130 DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVT 189
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKG-CYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+N L++ + G+++ +++ M+ +G PN ++ ++ GL R A+++ M
Sbjct: 190 YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 249
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ E ++P VSY L+ G C + + V +M Q+G VP + + ++
Sbjct: 250 VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLI 300
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 132/337 (39%), Gaps = 54/337 (16%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +IN + R D ++++ ++ +++ D Y+ I G + A
Sbjct: 361 PSVVCYNALINGYCKLGRMDLARELIREMEAKRV--KPDVVTYSTIISGYCKVGNLDSAF 418
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M P T++ ++ L K + ++ + +LGV+ D L+ G
Sbjct: 419 QLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 478
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL------------------------- 243
C+ GN+E A + DE ++ P+V TYS L++GL
Sbjct: 479 CKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 538
Query: 244 -------------------------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
C KG ++EA + + M D ++ILI G
Sbjct: 539 IKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 598
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI-CERMSPS 337
+ G V + + ++M G PNS S ++ GL ++ EA + ++ C ++ +
Sbjct: 599 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADA 658
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
S K LI + V+ + VL M + G +P G
Sbjct: 659 EAS-KALIDLNRKEGNVDALIDVLCGMARDGLLPSSG 694
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 23/228 (10%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIE--DIMQRIKVEKLCRFSDGFFYNVI 134
LNQ +K P+ Y+ +I L + KR DA E + M ++ V+ D F Y +
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ-----PDEFTYTTL 474
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI-----YTSA 189
G + KA+ +M P V T+++++N L + E + +
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534
Query: 190 AKLGVEIDA---CC-------LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
++ DA CC + LLKG C G ++ A V +N + + YS L
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
+HG C GNV +A ++M G ++ + L+ GL ++G V E
Sbjct: 595 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 126/284 (44%), Gaps = 9/284 (3%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D P+ Y+ +IN + D + D QRI + YN I A +
Sbjct: 83 DCPPDVVSYSTVINGFFKEGDLDKMLD--QRISPNVVT-------YNSIIAALCKAQTVD 133
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KA+E L M P T+N +++ S+ E GVE D N L+
Sbjct: 134 KAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLM 193
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC+NG A + D K+ +P++ TY TL+ G KG + E GLL+ M GI
Sbjct: 194 DYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 253
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ F+IL+ KQ KVEE M + +M+ +G PN+ +Y V+ L R +A
Sbjct: 254 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLY 313
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+MI E + P + Y LIH LC E + + +M+ +G
Sbjct: 314 FEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGI 357
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V T+N ++ L A+ + + T+ K GV D N ++ G C +G + A
Sbjct: 114 PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVF 173
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + EP+V TY++LM LC+ G EA + + M G+ D T+ L+ G
Sbjct: 174 LKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYAT 233
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G + E LL+ M G +PN + ++ +++ EA + +M + ++P+ V+
Sbjct: 234 KGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 293
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y +I LC VED ++M+ +G P ++ ++
Sbjct: 294 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 12/311 (3%)
Query: 70 DPISVISVLNQYSKRKDYN--------PNEALYTLIINKLAQAKRFD-AIEDIMQRIKVE 120
D +S +V+N + K D + PN Y II L +A+ D A+E + +K
Sbjct: 87 DVVSYSTVINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+ D YN I +G+ +AI L M S P V T+N +++ L
Sbjct: 147 VM---PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 203
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E + I+ S K G++ D LL+G G L +LD + PN +S L+
Sbjct: 204 EARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 263
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
++ VEEA + +M +G++ + VT+ +I L K G+VE+ M E+M +G
Sbjct: 264 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLR 323
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P+S Y +++ L ++ +A+EL M+ + S + + +I C + V + +
Sbjct: 324 PDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKL 383
Query: 361 LKKMVQQGFVP 371
MV+ G P
Sbjct: 384 FDLMVRIGVKP 394
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 9/182 (4%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQ--NCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D NILL GLC+ + A +L +C P+V +YST+++G ++G+
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGD------ 103
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L++M + I + VT+N +I+ L K V++ M++L M G P+ +Y +++G
Sbjct: 104 -LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 162
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ EA + +M + + P V+Y L+ LC + + M ++G P +
Sbjct: 163 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDIT 222
Query: 375 MW 376
+
Sbjct: 223 TY 224
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA--DTVTFN 272
E A +V DE ++ P+V +Y+ L++GLC++ +EA LL M +G D D V+++
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
+I+G K+G L++M + PN +Y ++ L + +A E++ M+
Sbjct: 93 TVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P ++Y ++HG C+ ++ LKKM G P
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEP 184
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 10/133 (7%)
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG--CYPNSASYQ 307
E+A + + + GI D ++NIL++GL + + +E ++LL M G C P+ SY
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
V+ G F E + +M+ +R+SP+ V+Y +I LC + V+ VL MV+
Sbjct: 93 TVINGF-----FKEGD--LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 368 GFVPRMGMWREIV 380
G +P + IV
Sbjct: 146 GVMPDCMTYNSIV 158
>gi|449445756|ref|XP_004140638.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g05600-like [Cucumis sativus]
gi|449526108|ref|XP_004170056.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g05600-like [Cucumis sativus]
Length = 497
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 152/328 (46%), Gaps = 18/328 (5%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKR-KDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
L+PT + +I +P + + + R DY N +Y +IN L + R + ++M
Sbjct: 9 LTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMINILGNSGRVSEMREVM 68
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+++ + C D F IK Y + G + I +NC +TFN +L +L+
Sbjct: 69 DQMR-DDSCECKDSVFSFAIKTYAS-HGLLEDGISLFKSFGRFNCTNRTQTFNTLLEILL 126
Query: 175 -SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
++L+ Q + GV+ LN+L++ LC+ G E A +V E Q+C PN
Sbjct: 127 KESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYPNR 186
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLE----RMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+Y +M GLC+ G + EA LL R+ +G D V + L+ L G++E+ ++
Sbjct: 187 LSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGEIEQAVE 246
Query: 290 LLERMKGKGC-YPNSASYQEVLYGLLDKKR-----FPEAKELVGRMICERMSPSFVSYKK 343
+L ++ KG P A Y+ LD+ R E K L+ + + PS SY
Sbjct: 247 ILGKILRKGLKAPKRAHYRID----LDQCRNSNLTIEEIKSLINEALIKGGIPSSDSYCA 302
Query: 344 LIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ L N+ + D V+ M+ +GF P
Sbjct: 303 MAVDLYNENKTDQGDKVVSHMIAKGFRP 330
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P Y LC++G V++A ++E G +NI++ GL GK M+
Sbjct: 330 PPSLIYEAKAASLCKEGKVDDAVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEY 389
Query: 291 LERM-KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
L++M K G N +Y +++GL + R+ EA +++ M+ + P ++ LI GLC
Sbjct: 390 LKKMAKQVGLVANKETYSTLVHGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLC 449
Query: 350 N-QKLVEDVDWVLKKMVQQGFVPRMGMWREIVG---CVTFGKDNRNRV 393
+ K E V W L++M+ QG +P + +W +V C G D +RV
Sbjct: 450 SVGKHYEAVMW-LEEMISQGQLPHVCVWNSLVSSLCCDVAGIDMCSRV 496
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI+LKGLC++G A L + KQ N TYSTL+HGLC + EA +LE M
Sbjct: 371 NIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYIEACKVLEEMV 430
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+ + TFN LI GL GK E + LE M +G P+ + ++ L
Sbjct: 431 IKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLVSSL 483
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE-GIDA 266
LC+ G ++ A V++E C P + Y+ ++ GLC+ G A L++M + G+ A
Sbjct: 342 LCKEGKVDDAVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVA 401
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T++ L+ GL + + E K+LE M K P S ++ ++ GL + EA +
Sbjct: 402 NKETYSTLVHGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWL 461
Query: 327 GRMICERMSPSFVSYKKLIHGLC 349
MI + P + L+ LC
Sbjct: 462 EEMISQGQLPHVCVWNSLVSSLC 484
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 126/301 (41%), Gaps = 43/301 (14%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVL-NLLVSAKLYGEIQGIYT---SAAKLGVEID 197
G+ A+ +M +C+P+ ++ +V+ L +L I +Y+ ++ G D
Sbjct: 165 GQSELALHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGD 224
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEF-------PKQ--------NCE------------ 230
LL LC+NG +E A +L + PK+ C
Sbjct: 225 IVIYRTLLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSL 284
Query: 231 ----------PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
P+ +Y + L + ++ ++ M ++G ++ + + L K
Sbjct: 285 INEALIKGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCK 344
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE-RMSPSFV 339
+GKV++ +K++E GC P A Y VL GL D + A E + +M + + +
Sbjct: 345 EGKVDDAVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKE 404
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTET 398
+Y L+HGLC + + VL++MV + F P + ++ G + GK +++ E
Sbjct: 405 TYSTLVHGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEM 464
Query: 399 V 399
+
Sbjct: 465 I 465
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVL-NLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ A++ + + C P++ +N+VL L K ++ + A ++G+ +
Sbjct: 346 GKVDDAVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKET 405
Query: 201 LNILLKGLC-ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+ L+ GLC EN +EA VL+E ++ P T++TL+ GLC G EA LE M
Sbjct: 406 YSTLVHGLCLENRYIEAC-KVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEM 464
Query: 260 ESEGIDADTVTFNILISGL 278
S+G +N L+S L
Sbjct: 465 ISQGQLPHVCVWNSLVSSL 483
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 153/345 (44%), Gaps = 40/345 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMA 141
K +P+ Y ++N L + ++ E + + + K+ D YN+ IK Y A
Sbjct: 212 KENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIV--PDTVTYNIMIKGYCK-A 268
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA+E DM N P T+ ++ S + + +Y + G+EI
Sbjct: 269 GKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSY 328
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++++ GLC+ A+ V + ++ C NV Y+ L+ + G++EEA L ERM++
Sbjct: 329 SLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKN 388
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMK-------------------------------- 289
EG + D VT+++L++GL K G++++GM+
Sbjct: 389 EGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIED 448
Query: 290 ---LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
L E M KGC +S Y ++ L + +A L GRM E + ++ LI
Sbjct: 449 AENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILID 508
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI-VGCVTFGKDNR 390
GL + E+ KM+ +G P + +R + +G GK R
Sbjct: 509 GLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVAR 553
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 92/179 (51%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G E DA ++L+ GLC++G L+ + D + N Y++L+ GL + G +E+A
Sbjct: 390 GFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDA 449
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L E M +G D+ +N +I L K GK+++ + L RM+ +GC ++ ++ G
Sbjct: 450 ENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDG 509
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L + + EA + +MI + ++P+ S++ L GLC V +L + G +P
Sbjct: 510 LFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIP 568
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 136/288 (47%), Gaps = 11/288 (3%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+L+I L + ++ + + + +K CR + + +I Y G + +A+
Sbjct: 328 YSLVIGGLCKQRKCMEAYAVFETMN-QKGCRANVAIYTALIDSYSK-NGSMEEAMRLFER 385
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P T+++++N L + + ++ GV I+A L+ GL + G
Sbjct: 386 MKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGR 445
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+E A + +E ++ C + Y+ ++ L + G +++A L RME EG D TF I
Sbjct: 446 IEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTI 505
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI GL K+ K EE +K ++M KG P AS++ + GL + A +++ +
Sbjct: 506 LIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMG 565
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ P +++ +I+ LC + +++ + +V +G REI G
Sbjct: 566 IIPE-TAFEDMINTLCKAQRIKEACKLADGIVDRG--------REIPG 604
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
+L+ L SA L +I+ ++ G+ + N L+K G +E +V +
Sbjct: 155 SLIELLTFSADLV-KIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKE 213
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+P++ TY+ L++GL +E A + E M+ I DTVT+NI+I G K GK+++
Sbjct: 214 NGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQK 273
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
M+ M+ K P+ +Y ++ ++ F L M + SY +I
Sbjct: 274 AMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIG 333
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
GLC Q+ + V + M Q+G + ++ ++
Sbjct: 334 GLCKQRKCMEAYAVFETMNQKGCRANVAIYTALI 367
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 35/214 (16%)
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
L E+ ++ + G++ N L+ GL + +E+A V + P+ TY+
Sbjct: 200 LVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYN 259
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVT--------------------------- 270
++ G C+ G +++A ME + + D +T
Sbjct: 260 IMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEER 319
Query: 271 --------FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
++++I GL KQ K E + E M KGC N A Y ++ EA
Sbjct: 320 GLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEA 379
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
L RM E P V+Y L++GLC ++D
Sbjct: 380 MRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDD 413
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 3/221 (1%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L + + K N Y +I+ L +A R + E++ + + EK C D + YN I
Sbjct: 417 LFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMS-EKGCA-RDSYCYNAIIDA 474
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
G+I +A+ M C +V TF ++++ L E + G+
Sbjct: 475 LAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPT 534
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
L GLC G + A +LD+ P + +++ LC+ ++EA L +
Sbjct: 535 VASFRALAIGLCLCGKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEACKLAD 593
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
+ G + +LI+ LRK G + +KL+ G G
Sbjct: 594 GIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIG 634
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 131/253 (51%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + ++ PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + AD +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ + G + A V D K + P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M++ G+ D T+++LI+GL K+ K+++ +L + M G PN ++
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +S ++Y LI+GLC + ++ ++ +M +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQS-VFDAITKWSLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ ++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G++P
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 108/209 (51%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K + N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + + +Y ++YGL K +A++L+ M + + P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 2/215 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV--PNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ GLC++G +A +L M S G+ +
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
T+ ++I+ K+G V G KLL+ M+ G P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 148/326 (45%), Gaps = 35/326 (10%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
SK+ + + Y +I L++ ++F A+ +++ ++ E + F +++ + + A
Sbjct: 147 SKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRFAS-A 205
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV--------------------------S 175
+ KA+E L +MP Y C P F +L+ L +
Sbjct: 206 RMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYRWKPSVKHFT 265
Query: 176 AKLYG--------EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+ LYG E + + +G+E D N LL G + G + A+ +L E ++
Sbjct: 266 SLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRK 325
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
CEPN +Y+ L+ LC+ +EEA L M++ G AD VT++ LISG K GK++ G
Sbjct: 326 RCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRG 385
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+LL+ M +G +PN YQ ++ K+ E KELV M +P Y +I
Sbjct: 386 YELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRL 445
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRM 373
C V++ + +M G P M
Sbjct: 446 ACKLGEVKEGIQLWNEMESSGLSPGM 471
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 121/302 (40%), Gaps = 44/302 (14%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+RK PN YT++I L + +R + + ++ C+ +D Y+ + G
Sbjct: 323 RRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNG-CQ-ADVVTYSTLISGFCKWG 380
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+I + E L +M +P+ + ++ + E + + K+G D N
Sbjct: 381 KIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYN 440
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA---------- 252
+++ C+ G ++ + +E P + T+ +++G E+G + EA
Sbjct: 441 TVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGR 500
Query: 253 -------FGLL----------ERME-----------SEGIDADTVTFNILISGLRKQGKV 284
+G L E++E S+G + + I I L +G V
Sbjct: 501 GLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIWIHALFSKGHV 560
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGL--LDKKRF-PEAKELVGRMICERMSPSFVSY 341
+E M K PN ++ ++++GL L ++F E E V +M +R +F Y
Sbjct: 561 KEACSFCIDMMDKDLMPNPDTFAKLMHGLKKLYNRQFAAEITEKVRKMAADR-QITFKMY 619
Query: 342 KK 343
K+
Sbjct: 620 KR 621
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 75/201 (37%), Gaps = 42/201 (20%)
Query: 185 IYTSAAKL-GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT---YSTLM 240
Y+ A+K G +D ++K L A + +++E ++N P++ T + LM
Sbjct: 142 FYSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQEN--PHLITPQVFVILM 199
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
V +A +L+ M G + D F L+ L K G V+E L E M+
Sbjct: 200 RRFASARMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMR----- 254
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
R PS + L++G C + + + V
Sbjct: 255 -------------------------------YRWKPSVKHFTSLLYGWCKEGKLMEAKHV 283
Query: 361 LKKMVQQGFVPRMGMWREIVG 381
L +M G P + ++ ++G
Sbjct: 284 LVQMKDMGIEPDIVVYNNLLG 304
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 107/231 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGR + A++ M + P+ +N +L LV + + +Y G +
Sbjct: 150 AGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ GLC+ G A + DE + PNV+ Y+ L+ LC G ++EA LL M+
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMK 269
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G D VT+N +SGL K G+V E + L ++ G Y ++ GL +RF
Sbjct: 270 DKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFD 329
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E M+ +SP V Y +I G +ED L M ++GFVP
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVP 380
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 15/305 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +YT++++ L A + D ++ +K +K C D YN GR+++A
Sbjct: 240 PNVKIYTVLLSSLCNAGKIDEAVQLLGSMK-DKGC-LPDEVTYNAFLSGLCKVGRVNEAF 297
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L + +K ++ +++ L A+ + E G Y + + + D I+++G
Sbjct: 298 QRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGC 357
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
E G +E A LD K+ P+ Y+T++ LC+ G++E A L M + D+
Sbjct: 358 AEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDS 417
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T I+I GL K+G V+E M++ + M GC P +Y ++ G + R EA+ L +
Sbjct: 418 TTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHK 477
Query: 329 MICERMSPSFV-------------SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
M F+ S +KL+H +C V +L+ ++ G VP +
Sbjct: 478 MEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537
Query: 376 WREIV 380
+ ++
Sbjct: 538 YNTLI 542
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 138/303 (45%), Gaps = 21/303 (6%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ +I+ L QA+RFD + + + D Y ++ AGRI A+ L
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNIS--PDVVLYTIMIRGCAEAGRIEDALSFLDV 372
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILLKGLCE 210
M P +N VL +L +G+++ +T +++ + +D+ I++ GLC+
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCD---HGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME---------- 260
G ++ A + DE + C+P V TY+ L+ G +G +EEA L +ME
Sbjct: 430 RGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLR 489
Query: 261 -SEGIDA--DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+ G + D+ + L+ + + G+V + KLL + G P+ +Y ++ GL +
Sbjct: 490 LTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKAR 549
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
A L + + +SP ++Y LI GL D + + ++Q G P + ++
Sbjct: 550 NLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYN 609
Query: 378 EIV 380
++
Sbjct: 610 SMM 612
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 116/288 (40%), Gaps = 35/288 (12%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F YN I +G I A+ M + C P+ T+N++++ L + G+ ++
Sbjct: 172 AFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFD 231
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
G+ + +LL LC G ++ A +L + C P+ TY+ + GLC+ G
Sbjct: 232 EMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVG 291
Query: 248 NVEEA-----------------------------------FGLLERMESEGIDADTVTFN 272
V EA FG + M I D V +
Sbjct: 292 RVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYT 351
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
I+I G + G++E+ + L+ MK KG P++ Y VL L D A L M+
Sbjct: 352 IMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN 411
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + +I GLC + LV++ + +M + G P + + ++
Sbjct: 412 NLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 129/290 (44%), Gaps = 52/290 (17%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF-SDGFFYN-VIKI---YGN 139
++ +P+ LYT++I A+A R IED + + V K F D F YN V+K+ +G+
Sbjct: 341 RNISPDVVLYTIMIRGCAEAGR---IEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGD 397
Query: 140 MA-------------------------------GRISKAIETLFDMPSYNCWPSVKTFNL 168
+ G + +A++ +M + C P+V T+N
Sbjct: 398 LERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNA 457
Query: 169 VLN------------LLVSAKLYGEIQGIYTSAAKLGVEI-DACCLNILLKGLCENGNLE 215
+++ +L G ++ ++ D+ L L+ +C++G +
Sbjct: 458 LIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVL 517
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A+ +L P+V TY+TL++GLC+ N++ A L + ++ +GI D +T+ LI
Sbjct: 518 KAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLI 577
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
GL + + + M L + + G P+ + Y ++ L K+ +A L
Sbjct: 578 DGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL 627
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 64/157 (40%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
EA F L + + ++ L+ G +A RM+ +N +
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTI 178
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
+ L G + + L RM GC PN A+Y ++ GL + +A ++ M+ +
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P+ Y L+ LCN +++ +L M +G +P
Sbjct: 239 MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLP 275
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%)
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E F L + G+ A + F L++ G+ + ++ RM P + Y +
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTI 178
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L L+D A L RM+ +P+ +Y L+ GLC Q + D + +M+ +G
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238
Query: 370 VPRMGMW 376
+P + ++
Sbjct: 239 MPNVKIY 245
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 150/327 (45%), Gaps = 38/327 (11%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
+KR++Y + + Y +I+ L +++ + ++Q + +C + +V+++ GN A
Sbjct: 1104 AKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGN-A 1162
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-VEIDACC 200
+ +AI + + + C P + +N ++ +L+ Y ++ +Y + G D
Sbjct: 1163 KMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVT 1222
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPK---------------------------------- 226
+ L+ C+ G ++A +L+E +
Sbjct: 1223 YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMR 1282
Query: 227 -QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
Q C P+V TY+ L+ GL + G ++EA+ M+ EG DTV N +I+ L K G+++
Sbjct: 1283 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLD 1342
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLD-KKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ MKL + M+ C P+ +Y ++ L + K R E RM +SPS +Y L
Sbjct: 1343 DAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSIL 1402
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I G C +E +L++M ++GF P
Sbjct: 1403 IDGFCKTNRMEKAMMLLEEMDEKGFPP 1429
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 151/348 (43%), Gaps = 41/348 (11%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDY-NPNEALYTLIINKLAQAKRFDAIEDIMQRI 117
T ++ +F D +S+ + R Y P+ YT +I L +A R D +
Sbjct: 1259 TMLIALFFKFNDAHGALSLFEEM--RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEM 1316
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
+ E CR F N+I G AGR+ A++ +M + C PSV T+N ++ L +K
Sbjct: 1317 QREG-CRPDTVFMNNMINFLGK-AGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESK 1374
Query: 178 LYG-EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE-----FP------ 225
E+ + + G+ + +IL+ G C+ +E A +L+E FP
Sbjct: 1375 SRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAY 1434
Query: 226 -----------------------KQNC-EPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
K+NC + R Y+ ++ L + G +++A + + M
Sbjct: 1435 CSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNK 1494
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D +N L+SGL + G ++E + + RM+ GC P+ SY +L GL
Sbjct: 1495 LGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHR 1554
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A E++ M + P VSY ++ L + + E+ ++K+M GF
Sbjct: 1555 AMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGF 1602
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 3/261 (1%)
Query: 89 PNEALYTLIINKLAQAK-RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y II L ++K R + +R+K + S F Y+++ R+ KA
Sbjct: 1358 PSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSS--FTYSILIDGFCKTNRMEKA 1415
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L +M P + +++ L AK Y ++ + A +++K
Sbjct: 1416 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKH 1475
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L + G L+ A + DE K C P+V Y+ LM GL G ++EA + RM+ G D
Sbjct: 1476 LGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD 1535
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++NI+++GL K G M++L MK P+ SY VL L F EA +L+
Sbjct: 1536 INSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMK 1595
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M ++Y ++ +
Sbjct: 1596 EMNTLGFEYDLITYSSILEAI 1616
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 5/201 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P A Y +I+ L +AKR+D ++ Q +K + C S Y V+ + AGR+
Sbjct: 1425 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELK--ENCGSSSARVYAVMIKHLGKAGRL 1482
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
AI +M C P V +N +++ L + E + G D NI+
Sbjct: 1483 DDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNII 1542
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GL + G A +L + P+V +Y+T++ L G EEA L++ M + G
Sbjct: 1543 LNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGF 1602
Query: 265 DADTVTFNILISGLRKQGKVE 285
+ D +T++ ++ + GKV+
Sbjct: 1603 EYDLITYSSILEAI---GKVD 1620
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 168/373 (45%), Gaps = 26/373 (6%)
Query: 14 SIIQSLSSASTITRKRTFALASPSASHQDS---DHHAYKLNHKDWLSPTEVLKIFSNLRD 70
SI+ ++IT+ + ++ + DS H+ Y LN ++ F +L
Sbjct: 73 SIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLN--------VLINSFCHLNR 124
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
SVL + K P+ A +T +I L + + ++ E GF
Sbjct: 125 VNFAFSVLAKILKLG-CQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWE-------GFQ 176
Query: 131 YNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
+V+ IY + G S AI L M NC P V + +++ L + +
Sbjct: 177 PDVV-IYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFN 235
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+++ G+ + N L+ LC G + +L+E PN + +T++ LC
Sbjct: 236 LFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALC 295
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G V +A +++ M G++ D VT+ LI G + +++E +K+ + M KGC PN
Sbjct: 296 KEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVF 355
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
SY ++ G +R +A L M +++ P+ V+Y LIHGLC+ ++D + ++M
Sbjct: 356 SYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREM 415
Query: 365 VQQGFVPRMGMWR 377
V G +P + +R
Sbjct: 416 VACGQIPDLVTYR 428
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ F +L + K Y + + G+ + LN+L+ C + AF V
Sbjct: 72 PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K C+P+ +++TL+ GLC +G + EA L ++M EG D V + LI+GL K
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++LL M+ C P+ Y +++ L ++ +A L MI + +SP+ V+
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L++ LCN + V+ +L +MV +P
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMP 282
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 127/292 (43%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + I+ + + KR+ + + + K++ + + NV+ R++ A
Sbjct: 72 PSIVDFAKILTSITKVKRYSTVLSLSR--KMDSFGIPHNVYTLNVLINSFCHLNRVNFAF 129
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L + C P +F ++ L GE ++ G + D L+ GL
Sbjct: 130 SVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGL 189
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G+ AA +L K NC+P+V Y TL+H LC+ +AF L M ++GI +
Sbjct: 190 CKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNI 249
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT N L+ L G+ + LL M PN+ S V+ L + +A ++V
Sbjct: 250 VTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDM 309
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + P V+Y LI G C + +++ V MV +G P + + ++
Sbjct: 310 MFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLI 361
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +++A + + M P V T+ +++ E ++ G +
Sbjct: 298 GMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSY 357
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C+ ++ A Y+ +E +Q PN TY+TL+HGLC G +++A L M +
Sbjct: 358 NTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVA 417
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D VT+ IL+ L K +++ M LL+ ++G P+ Y V+ G+ +
Sbjct: 418 CGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELED 477
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A++L + + + P+ +Y + HGLC + L+++ + +M
Sbjct: 478 ARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEM 520
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 1/229 (0%)
Query: 146 KAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
K + TL +M P+ + V++ L + + + + GVE D L
Sbjct: 266 KHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTAL 325
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C ++ A V D + C PNV +Y+TL++G C+ +++A L E M + +
Sbjct: 326 IDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKL 385
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+TVT+N LI GL G++++ + L M G P+ +Y+ +L L +A
Sbjct: 386 IPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMA 445
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
L+ + + P Y +I G+C +ED + + +G P +
Sbjct: 446 LLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNV 494
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 132/300 (44%), Gaps = 14/300 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ +Y +IN L + A +++ ++ G + +YG + + K
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSME--------KGNCQPDVVVYGTLIHSLCK 226
Query: 147 ------AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A +M + P++ T N ++ L + + + + + +A
Sbjct: 227 DRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAIS 286
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L ++ LC+ G + A V+D + EP+V TY+ L+ G C + ++EA + + M
Sbjct: 287 LTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMV 346
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G + ++N LI+G K ++++ M L E M + PN+ +Y +++GL R
Sbjct: 347 HKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQ 406
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A L M+ P V+Y+ L+ LC ++ +LK + P + ++ ++
Sbjct: 407 DAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVI 466
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 5/261 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
P+ YT +I+ D + + V K C + F YN +I Y + R+ KA
Sbjct: 317 PDVVTYTALIDGHCLRSEMDEAVKVFDMM-VHKGCA-PNVFSYNTLINGYCKIE-RMDKA 373
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +M P+ T+N +++ L + ++ G D ILL
Sbjct: 374 MYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDY 433
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+N +L+ A +L N +P+++ Y+ ++ G+C G +E+A L + S+G+ +
Sbjct: 434 LCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPN 493
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+NI+ GL K+G ++E KL M C + +Y + G L A +L+
Sbjct: 494 VWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLE 553
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M+ S VS L+ G+
Sbjct: 554 EMLARGFSCD-VSTTTLLVGM 573
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 138/319 (43%), Gaps = 11/319 (3%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQ----AKRFDAIEDIMQRIKVEKL 122
NL + V ++LN+ K PN T +++ L + A+ D + D+M + VE
Sbjct: 261 NLGEWKHVNTLLNEMVDSK-IMPNAISLTTVVDALCKEGMVAQAHDVV-DMMFQSGVEP- 317
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
D Y + + + +A++ M C P+V ++N ++N + +
Sbjct: 318 ----DVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKA 373
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
++ + + + N L+ GLC G L+ A + E P++ TY L+
Sbjct: 374 MYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDY 433
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC+ ++++A LL+ +E +D D + I+I G+ + G++E+ L + KG PN
Sbjct: 434 LCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPN 493
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+Y + +GL + EA +L M S +Y + G +L+
Sbjct: 494 VWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLE 553
Query: 363 KMVQQGFVPRMGMWREIVG 381
+M+ +GF + +VG
Sbjct: 554 EMLARGFSCDVSTTTLLVG 572
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 4/212 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
R+ PN Y +I+ L R DAI + + ++ D Y ++ Y
Sbjct: 382 RQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQI---PDLVTYRILLDYLCKNC 438
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ KA+ L + N P ++ + +V++ + A + + ++++ + G++ + N
Sbjct: 439 HLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYN 498
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I+ GLC+ G L+ A + E + C + TY+T+ G A LLE M +
Sbjct: 499 IMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLAR 558
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
G D T +L+ L G + LE M
Sbjct: 559 GFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDM 590
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 127/252 (50%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+F+N++ G I A+ + + PSV +FN ++N + E + ++
Sbjct: 141 YFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSA 200
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 201 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 260
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M+ KG P+ SY
Sbjct: 261 VDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTT 320
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + A E RMI E + V+Y LI GLC + D + +L++M+ G
Sbjct: 321 LIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVG 380
Query: 369 FVPRMGMWREIV 380
P G + I+
Sbjct: 381 LRPDTGTYTMII 392
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + Y + G
Sbjct: 83 SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEILECGYPASLYF 142
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C+ G++ A V D K P+V +++TLM+G G+++E F L M
Sbjct: 143 FNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 202
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 262
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-RMGMWREI 379
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P ++ I
Sbjct: 263 LAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLI 322
Query: 380 VGCVTFG 386
GC G
Sbjct: 323 DGCCKEG 329
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 111/211 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A V
Sbjct: 208 PDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEV 267
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +++ LI G K
Sbjct: 268 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCK 327
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 328 EGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGT 387
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 388 YTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 418
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+Y + D N L+ GLC+ G+L+ A ++DE + +P+ +Y+TL+ G C
Sbjct: 267 VYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCC 326
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P++
Sbjct: 327 KEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTG 386
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+Y ++ K +L+ M + PS V+Y L++G
Sbjct: 387 TYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 10/229 (4%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + + L +G + + GR+ A
Sbjct: 207 QPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLV--PNGVTFTTLIDGHCKNGRVDLA 264
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + G++ D L+ G
Sbjct: 265 MEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDG 324
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVR----TYSTLMHGLCEKGNVEEAFGLLERMESEG 263
C+ G+LE AF E K+ + N+R Y+ L+ GLC++G +A +L M S G
Sbjct: 325 CCKEGDLETAF----EHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVG 380
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ DT T+ ++I+ K+G V G KLL+ M+ G P+ +Y ++ G
Sbjct: 381 LRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 16/297 (5%)
Query: 110 IEDIMQRIKVEKLCRFSD-----GFFYNVIKIYGNMAGRISKAIET------LFDMPSYN 158
I+ + R +++K F D GF + + YG + + KA ET L + ++
Sbjct: 135 IKGLCFRGEIKKTLYFHDQVVAQGFQLDQVS-YGTLINGLCKAGETKAVARLLRKLEGHS 193
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
P V +N ++N L KL G+ +Y+ G+ D L+ G C G ++ AF
Sbjct: 194 VKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAF 253
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGN---VEEAFGLLERMESEGIDADTVTFNILI 275
+L+E +N P+V T+S L+ L ++G V+EA L E M+ + + D VT+N LI
Sbjct: 254 SLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLI 313
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
GL K +E + LL+ MK G P+ SY +L GL R AKE ++ +
Sbjct: 314 DGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCH 373
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
+ Y +I+GLC L + + KM +G +P +R I+ C KD ++
Sbjct: 374 LNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTII-CALSEKDENDK 429
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 115/233 (49%), Gaps = 2/233 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P FN +L+ LV K Y + ++ G+ D C L+IL+ C ++ AF V
Sbjct: 56 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
K+ P+ T +TL+ GLC +G +++ +++ ++G D V++ LI+GL K
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ + +LL +++G P+ Y ++ L K +A ++ MI + +SP V+
Sbjct: 176 AGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 235
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRV 393
Y LIHG C +++ +L +M + P + + ++ GK+ + ++
Sbjct: 236 YTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLID--ALGKEGKKKM 286
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P+ +Y IIN L + K D+ + V+ + D Y + I+G + G++ +A
Sbjct: 196 PDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGIS--PDVVTYTTL-IHGFCIMGKMKEA 252
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVS---AKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
L +M N P V TF+++++ L K+ E ++ + D N L
Sbjct: 253 FSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSL 312
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+N +LE A +L E + +P+V +Y+ L+ GLC+ G +E A + + +G
Sbjct: 313 IDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGC 372
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ +N++I+GL K G E M L +M+GKGC PN+ +++ ++ L +K +A++
Sbjct: 373 HLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEK 432
Query: 325 LVGRMI 330
++ MI
Sbjct: 433 ILREMI 438
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 103/249 (41%), Gaps = 38/249 (15%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + T ++++N ++ + K G DA LN L+KGLC G ++ Y
Sbjct: 91 PDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYF 150
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES------------------- 261
D+ Q + + +Y TL++GLC+ G + LL ++E
Sbjct: 151 HDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCK 210
Query: 262 ----------------EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+GI D VT+ LI G GK++E LL MK K P+ +
Sbjct: 211 NKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYT 270
Query: 306 YQEVLYGL---LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+ ++ L KK EA L M + M P V+Y LI GLC +E +LK
Sbjct: 271 FSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLK 330
Query: 363 KMVQQGFVP 371
+M + G P
Sbjct: 331 EMKEHGIQP 339
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y++II+ L + D ++ ++++ +D YN + AGR + L D
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGF--KADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P+V TF+++++ V E + + G+ + N L+ G C+
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
LE A ++D + C+P++ T++ L++G C+ +++ L M G+ A+TVT+N
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ G + GK+E KL + M + P+ SY+ +L GL D +A E+ G++ +
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
M Y +IHG+CN V+D W L
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDA-WDL 530
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 143/301 (47%), Gaps = 16/301 (5%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRI-------KVEKLCRFSDGFFYNVIKIYGN 139
Y P+ ++ ++N L R +++ R+ + L +G N
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN------- 206
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G++S A+ + M P+ T+ VLN++ + + + +++DA
Sbjct: 207 --GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+I++ GLC++G+L+ AF + +E + + ++ TY+TL+ G C G ++ LL M
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
I + VTF++LI K+GK+ E +LL+ M +G PN+ +Y ++ G + R
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA ++V MI + P +++ LI+G C ++D + ++M +G + + +
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 380 V 380
V
Sbjct: 445 V 445
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 119/248 (47%), Gaps = 2/248 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++S A T+ + P FN +LN L E + ++G + LN
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC NG + A ++D + +PN TY +++ +C+ G A LL +ME
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
I D V ++I+I GL K G ++ L M+ KG + +Y ++ G + R+ +
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
+L+ MI ++SP+ V++ LI + + + D +LK+M+Q+G P + ++
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID- 376
Query: 383 VTFGKDNR 390
F K+NR
Sbjct: 377 -GFCKENR 383
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 1/258 (0%)
Query: 125 FSDGFFYNVIKIYGNMAG-RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
FSD K+ + G + A++ DM P+V FN + + + K Y +
Sbjct: 49 FSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVL 108
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ G+ L+I++ C L AF + + K EP+ ++TL++GL
Sbjct: 109 ALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGL 168
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C + V EA L++RM G +T N L++GL GKV + + L++RM G PN
Sbjct: 169 CLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y VL + + A EL+ +M + V Y +I GLC +++ + +
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 364 MVQQGFVPRMGMWREIVG 381
M +GF + + ++G
Sbjct: 289 MEIKGFKADIITYNTLIG 306
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 146/322 (45%), Gaps = 25/322 (7%)
Query: 77 VLNQYSKRKDYNPNEALYTLIIN------KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
+L KRK +PN ++++I+ KL +A + ++++MQR G
Sbjct: 320 LLRDMIKRK-ISPNVVTFSVLIDSFVKEGKLREADQL--LKEMMQR-----------GIA 365
Query: 131 YNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
N I + G R+ +AI+ + M S C P + TFN+++N A + +
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ + GV + N L++G C++G LE A + E + P++ +Y L+ GLC+
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G +E+A + ++E ++ D + I+I G+ KV++ L + KG ++ +
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ L K +A L +M E +P ++Y LI ++++M
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 366 QQGFVPRMGMWREIVGCVTFGK 387
GF + + ++ ++ G+
Sbjct: 606 SSGFPADVSTVKMVINMLSSGE 627
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 153/345 (44%), Gaps = 40/345 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMA 141
K +P+ Y ++N L + ++ E + + + K+ D YN+ IK Y A
Sbjct: 210 KENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIV--PDTVTYNIMIKGYCK-A 266
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA+E DM N P T+ ++ S + + +Y + G+EI
Sbjct: 267 GKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSY 326
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++++ GLC+ A+ V + ++ C NV Y+ L+ + G++EEA L ERM++
Sbjct: 327 SLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKN 386
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMK-------------------------------- 289
EG + D VT+++L++GL K G++++GM+
Sbjct: 387 EGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIED 446
Query: 290 ---LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
L E M KGC +S Y ++ L + +A L GRM E + ++ LI
Sbjct: 447 AENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILID 506
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI-VGCVTFGKDNR 390
GL + E+ KM+ +G P + +R + +G GK R
Sbjct: 507 GLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVAR 551
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 92/179 (51%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G E DA ++L+ GLC++G L+ + D + N Y++L+ GL + G +E+A
Sbjct: 388 GFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDA 447
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L E M +G D+ +N +I L K GK+++ + L RM+ +GC ++ ++ G
Sbjct: 448 ENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDG 507
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L + + EA + +MI + ++P+ S++ L GLC V +L + G +P
Sbjct: 508 LFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIP 566
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 136/288 (47%), Gaps = 11/288 (3%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+L+I L + ++ + + + +K CR + + +I Y G + +A+
Sbjct: 326 YSLVIGGLCKQRKCMEAYAVFETMN-QKGCRANVAIYTALIDSYSK-NGSMEEAMRLFER 383
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P T+++++N L + + ++ GV I+A L+ GL + G
Sbjct: 384 MKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGR 443
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+E A + +E ++ C + Y+ ++ L + G +++A L RME EG D TF I
Sbjct: 444 IEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTI 503
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI GL K+ K EE +K ++M KG P AS++ + GL + A +++ +
Sbjct: 504 LIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMG 563
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ P +++ +I+ LC + +++ + +V +G REI G
Sbjct: 564 IIPE-TAFEDMINTLCKAQRIKEACKLADGIVDRG--------REIPG 602
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
+L+ L SA L +I+ ++ G+ + N L+K G +E +V +
Sbjct: 153 SLIELLTFSADLV-KIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKE 211
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+P++ TY+ L++GL +E A + E M+ I DTVT+NI+I G K GK+++
Sbjct: 212 NGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQK 271
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
M+ M+ K P+ +Y ++ ++ F L M + SY +I
Sbjct: 272 AMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIG 331
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
GLC Q+ + V + M Q+G + ++ ++
Sbjct: 332 GLCKQRKCMEAYAVFETMNQKGCRANVAIYTALI 365
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 35/214 (16%)
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
L E+ ++ + G++ N L+ GL + +E+A V + P+ TY+
Sbjct: 198 LVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYN 257
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVT--------------------------- 270
++ G C+ G +++A ME + + D +T
Sbjct: 258 IMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEER 317
Query: 271 --------FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
++++I GL KQ K E + E M KGC N A Y ++ EA
Sbjct: 318 GLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEA 377
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
L RM E P V+Y L++GLC ++D
Sbjct: 378 MRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDD 411
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 3/221 (1%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L + + K N Y +I+ L +A R + E++ + + EK C D + YN I
Sbjct: 415 LFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMS-EKGCA-RDSYCYNAIIDA 472
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
G+I +A+ M C +V TF ++++ L E + G+
Sbjct: 473 LAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPT 532
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
L GLC G + A +LD+ P + +++ LC+ ++EA L +
Sbjct: 533 VASFRALAIGLCLCGKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEACKLAD 591
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
+ G + +LI+ LRK G + +KL+ G G
Sbjct: 592 GIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIG 632
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 151/356 (42%), Gaps = 37/356 (10%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
LR S + + K K+ P+ Y I++L + +R + ++ ++ L +
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGL--VPN 321
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
YN + G + KA +M + SV T+NL+++ L K E + +
Sbjct: 322 AVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIK 381
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH------ 241
+ GVE D NI + G C GN + A + DE ++N P V TY++L+
Sbjct: 382 EMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRN 441
Query: 242 -----------------------------GLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
G C GN++ AF LL+ M++ + D VTFN
Sbjct: 442 RMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFN 501
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
L+ G ++ KVEE KLL+ MK +G P+ SY ++ G + +A E+ M+
Sbjct: 502 TLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSL 561
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
P+ ++Y LI G + + +L++M +G P + ++ + D
Sbjct: 562 GFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDD 617
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 5/267 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKAIETLF 152
Y L+I+ L KR + ED+++ ++ + + D YN I+I G G KA+
Sbjct: 360 YNLLIHALFLEKRIEEAEDMIKEMREKGV--EPDVVTYN-IQINGYCRCGNAKKALSLFD 416
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M N P+V+T+ ++++ E + + + K G+ D N L+ G C NG
Sbjct: 417 EMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNG 476
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
N++ AF +L E P+ T++TLM G C + VEEA LL+ M+ GI D +++N
Sbjct: 477 NIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYN 536
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
LISG K+G +++ +++ + M G P +Y ++ G A+EL+ M +
Sbjct: 537 TLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSK 596
Query: 333 RMSPSFVSYKKLIHGL-CNQKLVEDVD 358
++P +Y +I + N LVE+ D
Sbjct: 597 GITPDDSTYLYVIEAMKTNDDLVENDD 623
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 2/278 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
+ ++IN L + ++ +D + ++V + + YN + + G+ A +
Sbjct: 220 FNIMINILCREGKWKKAKDFIGHMEVYGV--KPNVVTYNTVINGYCLRGKFEAASKIFKT 277
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M N P T+N ++ L + E G+ + G+ +A N L+ G C G+
Sbjct: 278 MKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGD 337
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ AF DE + +V TY+ L+H L + +EEA +++ M +G++ D VT+NI
Sbjct: 338 LDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNI 397
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
I+G + G ++ + L + M K P +Y ++ + R EA+E + I E
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M P + + LI G C ++ +LK+M VP
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVP 495
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 117/238 (49%), Gaps = 2/238 (0%)
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M N S+ TFN+++N+L + + + GV+ + N ++ G C G
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
EAA + +N +P+ TY++ + LC++ +EEA G+L ++ G+ + VT+N
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
LI G +G +++ + M +G + +Y +++ L +KR EA++++ M +
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
+ P V+Y I+G C + + +MV++ P + + ++ FGK NR
Sbjct: 387 GVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLID--VFGKRNR 442
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 79 SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 138
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 198
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 318
Query: 381 -GCVTFG 386
GC G
Sbjct: 319 DGCCKEG 325
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 131/255 (51%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 137 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 193
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 194 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 253
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKIT 313
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A E RMI E + V+Y L GLC + D + +L++M+
Sbjct: 314 YTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREML 373
Query: 366 QQGFVPRMGMWREIV 380
G P + I+
Sbjct: 374 SVGLKPDARTYTMII 388
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 110/211 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 204 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCK 323
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y + GL + R +A++++ M+ + P +
Sbjct: 324 EGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDART 383
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 384 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 414
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 37/253 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL--VPNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYN-----------------------------------TLIYG 285
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ A +++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 286 LCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLD 345
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + L SGL ++G+ + K+L M G P++ +Y ++ K + +L+
Sbjct: 346 EVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLK 405
Query: 328 RMICERMSPSFVS 340
M + PS V+
Sbjct: 406 EMQRDGHVPSVVT 418
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 156/334 (46%), Gaps = 37/334 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +YT ++ A+ R + I++R++ + + D F YN + I A R+ +A
Sbjct: 449 PNAVVYTTLMTAHAKEGRVEESRMILERMREQGI--LPDVFCYNSLIIGFCKAKRMEEAR 506
Query: 149 ETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQ--------GIYTSA---- 189
L +M P+ T+ ++ + ++ + + E+ GIYT+
Sbjct: 507 TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGH 566
Query: 190 AKLG----------------VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
K G V D ++L+ GL NG + AF + E ++ PN
Sbjct: 567 CKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 626
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY++L+ G C++GNV++A LLE M +GI+ D VT+NILI GL K G++E L +
Sbjct: 627 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD 686
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
++G+G PN +Y ++ G K A +L+ M+ + P Y +++ C ++
Sbjct: 687 IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEK 746
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
E + ++M+++GF + I G GK
Sbjct: 747 FEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGK 780
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 142/293 (48%), Gaps = 4/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKA 147
P+ Y ++IN KR + E + +++ + + YN + I G M G I +A
Sbjct: 274 PDLYTYDILINGFCMEKR--SREAKLMLLEMIDVGLKPEPITYNAL-IDGFMRQGDIEQA 330
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M + ++ +N +LN + A + I + GVE D+ ++L++G
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C N+ AF +LDE K+ P V TYS +++GLC GN++ +L M G+ +
Sbjct: 391 HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPN 450
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + L++ K+G+VEE +LERM+ +G P+ Y ++ G KR EA+ +
Sbjct: 451 AVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM 510
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ R+ P+ +Y I G +E D +M+ G +P +G++ ++
Sbjct: 511 EMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALI 563
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 172/365 (47%), Gaps = 40/365 (10%)
Query: 37 SASHQDSD---HHAYKLNHKDWLSP-TEVLK-IFSNLRDPISVISVLNQYSKRKDYNPNE 91
S + QD D A L + +W P ++++K I N P++V+ + + + + +PN
Sbjct: 95 STAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNS 154
Query: 92 ALYTLI-------------INKLAQAKRFD----------AIEDIMQRIKVEKLCRFSDG 128
++ ++ +N K F+ + D+++ KVE + DG
Sbjct: 155 VIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDG 214
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNC-WPSVKTFN-LVLNLLVSAKLYGEIQGIY 186
A ++ + T +M S +C +VK ++L + A+L E +
Sbjct: 215 M----------CAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELK 264
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S G+ D +IL+ G C A +L E +P TY+ L+ G +
Sbjct: 265 RSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQ 324
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G++E+AF + + M + GI+A+ + +N L++G+ K GK+E+ +++++ M KG P+S +Y
Sbjct: 325 GDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTY 384
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ G + A EL+ M +++P+ ++Y +I+GLC ++ + +L++MV
Sbjct: 385 SLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVM 444
Query: 367 QGFVP 371
G P
Sbjct: 445 NGLKP 449
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 133/310 (42%), Gaps = 12/310 (3%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+L++ KRK P Y++IIN L + I++ + + L + Y +
Sbjct: 403 LLDEMKKRK-LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGL--KPNAVVYTTLMT 459
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
GR+ ++ L M P V +N ++ AK E + + +
Sbjct: 460 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 519
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+A + G + G +E A +E PNV Y+ L+ G C++GNV EAF +
Sbjct: 520 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 579
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ S + D T+++LI GL + GK+ E + ++ KG PN+ +Y ++ G +
Sbjct: 580 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 639
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+A +L+ M + ++P V+Y LI GLC +E + + +G P
Sbjct: 640 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPN---- 695
Query: 377 REIVGCVTFG 386
CVT+
Sbjct: 696 -----CVTYA 700
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 125/293 (42%), Gaps = 38/293 (12%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+++I+ L++ + I ++ + L + F YN + G + KA + L +
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGL--LPNAFTYNSLISGSCKQGNVDKASQLLEE 651
Query: 154 MPSYNCWPSVKTFNLVLNLLVSA-------KLYGEIQG--------IY------------ 186
M P + T+N++++ L A L+ +I+G Y
Sbjct: 652 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 711
Query: 187 -TSAAKL-------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
T+A +L GV DA N++L C+ E A + E ++ V +++T
Sbjct: 712 PTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNT 770
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+ G C+ G ++EA LLE M + + VT+ LI K G + E +L M+ +
Sbjct: 771 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 830
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
P + +Y +L+G + E L M+ + + P ++Y +I C +
Sbjct: 831 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCRE 883
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 132/328 (40%), Gaps = 56/328 (17%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K NP+ Y ++I+ L +A + +++ I+ G N + + G
Sbjct: 655 KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE-------GRGLTPNCVTYAAMVDGYC 707
Query: 145 -----SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ A + L +M P +N++LN + + + ++ + G
Sbjct: 708 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STV 766
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQ---------------NCE-------------- 230
N L++G C++G L+ A ++L+E ++ NC+
Sbjct: 767 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 826
Query: 231 ------PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
P +TY++L+HG GN+ E L E M ++GI+ D +T+ ++I ++G V
Sbjct: 827 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 886
Query: 285 EEGMKLLERMKGKGCYPNSASYQ-------EVLYGLLDKKRFPEAKELVGRMICERMSPS 337
E KL + + KG P + ++ + G EA E++ M+ +
Sbjct: 887 MEACKLKDEILVKG-MPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 945
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
S L+ G N ED D +LK+M
Sbjct: 946 TTSLGDLVDGNQNGANSEDSDNLLKQMA 973
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 18/182 (9%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL L + +E + V D P+V TY+ ++ C+ GNV++A +L M
Sbjct: 193 NSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMG- 251
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
K ++E ++L M KG P+ +Y ++ G +KR E
Sbjct: 252 -----------------EKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSRE 294
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
AK ++ MI + P ++Y LI G Q +E + +MV G + +W ++
Sbjct: 295 AKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLN 354
Query: 382 CV 383
V
Sbjct: 355 GV 356
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 138/287 (48%), Gaps = 14/287 (4%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N +Y ++++ + + + E +++R+ +L D +N AG++ +A
Sbjct: 218 NRVVYNTLVSRFCREEMNNEAERLVERMN--ELGVLPDVVTFNSRISALCRAGKVMEASR 275
Query: 150 TLFDM--------PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
DM P P+V TFNL+L + G+ +G+ + K+G C
Sbjct: 276 IFRDMQMDAELGLPR----PNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECY 331
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NI L GL NG L A VLDE + EPN TY+ +M GLC + +A GL++ M
Sbjct: 332 NIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMR 391
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ DTV ++ L+ G +GKV E +L M GC PN+ + +L+ L + R E
Sbjct: 392 NGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLE 451
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A+E++ +M + P V+ +++GLC ++ ++ +M G
Sbjct: 452 AEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNG 498
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 145/330 (43%), Gaps = 32/330 (9%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K PN Y ++++ L + + D+M R V + D Y+ + ++G +
Sbjct: 357 KGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGV-----YPDTVAYSTL-LHGYCS 410
Query: 142 -GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ +A L +M C P+ T N +L+ L E + + + + D
Sbjct: 411 RGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVT 470
Query: 201 LNILLKGLCENGNLEAAFYVLDEF----PKQ------------------NCEPNVRTYST 238
NI++ GLC NG L+ A ++ E P NC P+ TY+T
Sbjct: 471 CNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTT 530
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L++GLC+ G +EEA M ++ + D+VT++ I KQGK+ ++L+ M+ G
Sbjct: 531 LINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNG 590
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C +Y ++ GL + E L M + +SP +Y +I LC +D
Sbjct: 591 CSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAI 650
Query: 359 WVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
+L +M+ +G P + ++ ++ + D
Sbjct: 651 SLLHEMLDKGISPNVSSFKILIKAFSKSSD 680
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 137/288 (47%), Gaps = 9/288 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P + L+I+ L +++ FD + +++ + C + F ++ AG + +A+
Sbjct: 148 PQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCC--PNEFTLGILVRGLCRAGLVKQAL 205
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E + + S V +N +++ ++ E + + +LGV D N + L
Sbjct: 206 ELVNNNNSCRIANRV-VYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISAL 264
Query: 209 CENGNLEAAFYVLDEFPKQNCE-----PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
C G + A + + + + E PNV T++ ++ G C+ G + +A GL+E M+ G
Sbjct: 265 CRAGKVMEASRIFRDM-QMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVG 323
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+NI + GL + G++ E +L+ M KG PN+ +Y ++ GL +A+
Sbjct: 324 NFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDAR 383
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ M+ + P V+Y L+HG C++ V + VL +M++ G P
Sbjct: 384 GLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQP 431
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 130/325 (40%), Gaps = 51/325 (15%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG-FFYNVIKIYG 138
Q K Y P+ +++N L + D +I+ + G F ++I
Sbjct: 457 QKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIH 516
Query: 139 NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
N++ NC P T+ ++N L E + + + D+
Sbjct: 517 NVS----------------NCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDS 560
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+ + C+ G + +AF VL + + C ++TY+ L+ GL + E +GL +
Sbjct: 561 VTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDE 620
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY------------ 306
M+ +GI D T+N +I+ L + GK ++ + LL M KG PN +S+
Sbjct: 621 MKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSD 680
Query: 307 -----------------QEVLYG-----LLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+E LY LL + EAKEL + ++ YK L
Sbjct: 681 FKVACELFEVALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDL 740
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGF 369
I LC + + D + +L K++ +G+
Sbjct: 741 IARLCQDERLADANSLLYKLIDKGY 765
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 119/312 (38%), Gaps = 77/312 (24%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ +NL+L + G + +Y+ V N+L+ LCE+ + A +
Sbjct: 113 PSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQL 172
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG-------------------------- 254
++ P++ C PN T L+ GLC G V++A
Sbjct: 173 FEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRVVYNTLVSRFCRE 232
Query: 255 --------LLERMESEGIDADTVTFNILISGLRKQGKVEEGMK----------------- 289
L+ERM G+ D VTFN IS L + GKV E +
Sbjct: 233 EMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPN 292
Query: 290 ----------------------LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
L+E MK G + + Y L GLL EA+ ++
Sbjct: 293 VVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLD 352
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
M+ + + P+ +Y ++ GLC ++ D ++ M++ G P + ++ G
Sbjct: 353 EMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLL----HGY 408
Query: 388 DNRNRVYVTETV 399
+R +V+ ++V
Sbjct: 409 CSRGKVFEAKSV 420
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 138/307 (44%), Gaps = 29/307 (9%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDA-----IEDIMQRIKVEKLCRFSD 127
S S++N + P+ YT +IN L + R + IE + + ++ + + D
Sbjct: 507 SFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVT--YD 564
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIY 186
F ++ K G+IS A L DM C +++T+N L+L L + +++ EI G+
Sbjct: 565 TFIWSFCK-----QGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIF-EIYGLK 618
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G+ D C N ++ LCE G + A +L E + PNV ++ L+ +
Sbjct: 619 DEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKS 678
Query: 247 GNVEEAFGLLE-------RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ + A L E R E+ ++ FN L++G G++ E +L E +
Sbjct: 679 SDFKVACELFEVALNICGRKEA----LYSLMFNELLAG----GQLSEAKELFEVSLDRYL 730
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
+ Y++++ L +R +A L+ ++I + S+ +I GL + D
Sbjct: 731 TLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADE 790
Query: 360 VLKKMVQ 366
+ K+M++
Sbjct: 791 LAKRMME 797
>gi|356504195|ref|XP_003520884.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like
[Glycine max]
Length = 1114
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 149/328 (45%), Gaps = 42/328 (12%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
SPT V K+ ++ DP+ + + S++ + + Y +++ KL ++K F ++D+++R
Sbjct: 58 SPTRVQKLIASQSDPLLAKEIFDLASRQPKFRHTYSSYLILLLKLGRSKHFSLLDDLLRR 117
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+K + + F +IK+Y A KA+ + + + +NC P K N +L +LVS
Sbjct: 118 LKFDS-HPITPTLFTYLIKVYAE-ADLPDKALNSFYTILHFNCKPLPKHLNRILEVLVSH 175
Query: 177 KLYGEIQG-IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ + ++ A + GVE D NIL++ C NG++ A+ + ++ K++ P++ +
Sbjct: 176 RNFIRPAFYLFKDAHRYGVEPDTKSYNILMRAFCLNGDISVAYSLFNKMFKRDLVPDIES 235
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y LM LC K V A LLE M ++G D L+SGL G ++E K +E
Sbjct: 236 YRILMQALCRKSQVNGAVDLLEDMLNKGFVPD----RTLVSGLCDMGMLDEASKYVE--- 288
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
M+ SP F L+ G CN VE
Sbjct: 289 --------------------------------EMLSIDFSPHFAVVHALVKGFCNVGRVE 316
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIVGCV 383
D VL K ++ G P + W I+ +
Sbjct: 317 DACGVLTKALEHGEAPHLDTWMAIMPVI 344
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 124/240 (51%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + K D+ Y P V++++++++ L A E I+ + + G +DA
Sbjct: 37 AGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARA 96
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ G C++G ++ A+ L+E ++ P V TY +++ GL + ++EA+ L E +
Sbjct: 97 YNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK 156
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+GI+ + + ++ LI G K G+++E +LE M KG PN ++ ++ L+ +
Sbjct: 157 SKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEIN 216
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA M + SP+ +Y LI+GLC + ++M +QG VP + + ++
Sbjct: 217 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMI 276
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 117/256 (45%), Gaps = 15/256 (5%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-- 140
K K P A Y II+ LA+ R D + + K S G NVI +Y ++
Sbjct: 121 KVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK-------SKGIELNVI-VYSSLID 172
Query: 141 ----AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
GRI +A L +M P+V T+N +++ LV A+ E + S ++
Sbjct: 173 GFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSP 232
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ +IL+ GLC AF E KQ PNV TY+T++ GL + GN+ +A L
Sbjct: 233 NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLF 292
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
ER ++ G D +FN LI G+ + E + E + +GC N + +L L+K
Sbjct: 293 ERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLL-DALNK 351
Query: 317 KRFPEAKELVGRMICE 332
E +VG ++ E
Sbjct: 352 AECIEQAAVVGAVLRE 367
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 2/260 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++I+ L +A + I +K D YN + +G++ KA
Sbjct: 57 PDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFAL--DARAYNAVVDGFCKSGKVDKAY 114
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M + P+V T+ +++ L E ++ A G+E++ + L+ G
Sbjct: 115 EALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGF 174
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G ++ A+ +L+E K+ PNV T+++LM L + + EA + M+ +T
Sbjct: 175 GKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNT 234
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T++ILI+GL + K + + M+ +G PN +Y ++ GL +A L R
Sbjct: 235 YTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFER 294
Query: 329 MICERMSPSFVSYKKLIHGL 348
P S+ LI G+
Sbjct: 295 FKANGGIPDAASFNALIEGM 314
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
I+ + G + D LN + + + G++E + ++ P+VR+YS L+HGL
Sbjct: 11 IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 70
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ G E + M+ G D +N ++ G K GKV++ + LE MK K P A
Sbjct: 71 KAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVA 130
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ GL R EA L + + + + Y LI G +++ +L++M
Sbjct: 131 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM 190
Query: 365 VQQGFVPRMGMWREIV 380
+++G P + W ++
Sbjct: 191 MKKGLAPNVYTWNSLM 206
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 85/180 (47%), Gaps = 2/180 (1%)
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
+G E + E ++ C+P++ +T M + + G+VE+ + E ++ G D +
Sbjct: 2 HGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRS 61
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
++ILI GL K G+ E + MK +G ++ +Y V+ G + +A E + M
Sbjct: 62 YSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMK 121
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
+ + P+ +Y +I GL +++ + ++ +G + ++ ++ FGK R
Sbjct: 122 VKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLID--GFGKVGR 179
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 112/212 (52%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T N+++N L + + KLG++ D+ L+ GLC G ++ A + +E
Sbjct: 123 TLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEM 182
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
++ PN T++ L+ LC+KG V EA + E M +G++ + T+N L++G + ++
Sbjct: 183 AGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEM 242
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ K+ E M GKGC P+ SY ++ G +R EAK L+ +M + + P+ V+Y L
Sbjct: 243 NDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTL 302
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ GLC+ + + + KKM G +P + +
Sbjct: 303 MQGLCHASSLLEAQELFKKMCSSGMLPNLRTY 334
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 35/265 (13%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE------ 195
GRI +A+E +M + P+ TF +++++L + E + ++ + + GVE
Sbjct: 170 GRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTY 229
Query: 196 ---IDACCL--------------------------NILLKGLCENGNLEAAFYVLDEFPK 226
++ CL +IL+ G C++ ++ A +L + +
Sbjct: 230 NALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSE 289
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+ PN TY+TLM GLC ++ EA L ++M S G+ + T++IL+ GL K G +EE
Sbjct: 290 KELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEE 349
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+KLL M+ + P+ Y ++ G+ + AKEL ++ + PS +Y +I
Sbjct: 350 ALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIK 409
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
GL + L ++ + +KM GF+P
Sbjct: 410 GLLKEGLSDEAYKLFRKMEDDGFLP 434
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 140/298 (46%), Gaps = 9/298 (3%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQ---AKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+ + N+ + R D PN +T++++ L + + + M VE + + Y
Sbjct: 176 VELFNEMAGR-DAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVE-----PNIYTY 229
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + + ++ A + M C PSV ++++++N ++ E + + T ++
Sbjct: 230 NALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSE 289
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
+ + N L++GLC +L A + + PN+RTYS L+ GLC+ G++EE
Sbjct: 290 KELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEE 349
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A LL M+ ++ D V +NILI G+ GK+E +L ++ G P+ +Y ++
Sbjct: 350 ALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIK 409
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
GLL + EA +L +M + P SY +I G + ++ +MV + F
Sbjct: 410 GLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRF 467
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI +A L M P+ T+N ++ L A E Q ++ G+ + +
Sbjct: 276 RIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYS 335
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
ILL GLC++G+LE A +L ++ EP++ Y+ L+ G+ G +E A L ++ +
Sbjct: 336 ILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFAN 395
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI T+NI+I GL K+G +E KL +M+ G P+S SY ++ G L + A
Sbjct: 396 GIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTA 455
Query: 323 KELVGRMICERMSPSFVSYKKLI 345
+L+ M+ R S ++K L+
Sbjct: 456 IQLIDEMVGRRFSADSSTFKMLL 478
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 18/296 (6%)
Query: 94 YTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
Y+ +++ Q F A D I + LCR S F A+ L
Sbjct: 102 YSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHF----------------AVSVLS 145
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M P TF ++N L + E ++ A + IL+ LC+ G
Sbjct: 146 KMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKG 205
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+ A V + ++ EPN+ TY+ LM+G C + + +A + E M +G +++
Sbjct: 206 MVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYS 265
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
ILI+G K +++E LL +M K PN+ +Y ++ GL EA+EL +M
Sbjct: 266 ILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSS 325
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
M P+ +Y L+ GLC +E+ +L M ++ P + ++ ++ G GK
Sbjct: 326 GMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGK 381
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 126/283 (44%), Gaps = 9/283 (3%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D P+ Y+ +IN + D + D QRI + YN I A +
Sbjct: 83 DCPPDVVSYSTVINGFFKEGDLDKMLD--QRISPNVVT-------YNSIIAALCKAQTVD 133
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KA+E L M P T+N +++ S+ E GVE D N L+
Sbjct: 134 KAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLM 193
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC+NG A + D K+ +P++ TY TL+ G KG + E GLL+ M GI
Sbjct: 194 DYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 253
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ F+IL+ KQ KVEE M + +M+ +G PN+ +Y V+ L R +A
Sbjct: 254 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLY 313
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+MI E + P + Y LIH LC E + + +M+ +G
Sbjct: 314 FEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRG 356
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V T+N ++ L A+ + + T+ K GV D N ++ G C +G + A
Sbjct: 114 PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVF 173
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + EP+V TY++LM LC+ G EA + + M G+ D T+ L+ G
Sbjct: 174 LKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYAT 233
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G + E LL+ M G +PN + ++ +++ EA + +M + ++P+ V+
Sbjct: 234 KGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 293
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y +I LC VED ++M+ +G P ++ ++
Sbjct: 294 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 12/311 (3%)
Query: 70 DPISVISVLNQYSKRKDYN--------PNEALYTLIINKLAQAKRFD-AIEDIMQRIKVE 120
D +S +V+N + K D + PN Y II L +A+ D A+E + +K
Sbjct: 87 DVVSYSTVINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+ D YN I +G+ +AI L M S P V T+N +++ L
Sbjct: 147 VM---PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 203
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E + I+ S K G++ D LL+G G L +LD + PN +S L+
Sbjct: 204 EARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 263
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
++ VEEA + +M +G++ + VT+ +I L K G+VE+ M E+M +G
Sbjct: 264 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLR 323
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P+S Y +++ L ++ +A+EL M+ + S + + +I C + V + +
Sbjct: 324 PDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKL 383
Query: 361 LKKMVQQGFVP 371
MV+ G P
Sbjct: 384 FDLMVRIGVKP 394
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 9/182 (4%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQ--NCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D NILL GLC+ + A +L +C P+V +YST+++G ++G+
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGD------ 103
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L++M + I + VT+N +I+ L K V++ M++L M G P+ +Y +++G
Sbjct: 104 -LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 162
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ EA + +M + + P V+Y L+ LC + + M ++G P +
Sbjct: 163 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDIT 222
Query: 375 MW 376
+
Sbjct: 223 TY 224
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA--DTVTFN 272
E A +V DE ++ P+V +Y+ L++GLC++ +EA LL M +G D D V+++
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
+I+G K+G L++M + PN +Y ++ L + +A E++ M+
Sbjct: 93 TVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P ++Y ++HG C+ ++ LKKM G P + + ++
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLM 193
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 17/241 (7%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--VEKLCRFSDGFFYNVIKIYGNM 140
+++ NPN Y +I+ L ++ R +ED M + +++ R D YN + +
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGR---VEDAMLYFEQMIDEGLR-PDSIVYNSLIHSLCI 338
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ KA E +M S FN +++ E ++ ++GV+ D
Sbjct: 339 FDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L G + A + F PN TY + + +G +EE L ME
Sbjct: 399 L----------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 448
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G D+ N ++ L ++G++ L + K + AS + LL ++
Sbjct: 449 DNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH-FSLEASTASLFIDLLSGGKYQ 507
Query: 321 E 321
E
Sbjct: 508 E 508
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 134/268 (50%), Gaps = 6/268 (2%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN-MAGRISKAIET 150
A Y L+++ L R ++++ + + L D F YN++ I G+ G + KA+E
Sbjct: 253 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLA--PDVFTYNIL-INGHCKEGNVKKALEI 309
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
+M +V T+ ++ L E ++ A + G+ D N L+
Sbjct: 310 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 369
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
+GN++ AF ++ E K+ P+ TY+TLM GLC G V+EA L++ M GI D VT
Sbjct: 370 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 429
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+N LISG +G V++ +++ M KG P +Y ++ GL + +A+ +V M+
Sbjct: 430 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 489
Query: 331 CERMSPSFVSYKKLIHGLC--NQKLVED 356
++P +Y LI GL +++ ++D
Sbjct: 490 ENGITPDDSTYISLIEGLTTEDERAIDD 517
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 140/298 (46%), Gaps = 2/298 (0%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ V ++ + + P +Y +I + D R+ VE+ + YN+
Sbjct: 200 AVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM-VERGVAMTVAT-YNL 257
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ M GR ++A E + +M P V T+N+++N + I+ + ++ G
Sbjct: 258 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 317
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
V L+ L + G ++ + DE ++ P++ Y+ L++ GN++ AF
Sbjct: 318 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 377
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
++ ME + I D VT+N L+ GL G+V+E KL++ M +G P+ +Y ++ G
Sbjct: 378 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 437
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K +A + M+ + +P+ ++Y LI GLC +D + ++K+MV+ G P
Sbjct: 438 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 495
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 154/332 (46%), Gaps = 19/332 (5%)
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
P + +L Q + PN Y +I R A DIM+ ++ E+ + +
Sbjct: 130 PARALELLRQMPR-----PNAVTYNTVIAGFCSRGRVQAALDIMREMR-ERGGIAPNQYT 183
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA- 189
Y + GR+ +A++ +M + VK ++ N L+ Y + QG +A
Sbjct: 184 YGTVISGWCKVGRVDEAVKVFDEMLTKG---EVKPEAVMYNALIGG--YCD-QGKLDTAL 237
Query: 190 ------AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ GV + N+L+ L +G A+ +++E + P+V TY+ L++G
Sbjct: 238 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 297
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C++GNV++A + E M G+ A VT+ LI L K+G+V+E KL + +G P+
Sbjct: 298 CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 357
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
Y ++ A E++G M +R++P V+Y L+ GLC V++ ++ +
Sbjct: 358 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 417
Query: 364 MVQQGFVPRMGMWREIVGCVTFGKDNRNRVYV 395
M ++G P + + ++ + D ++ + +
Sbjct: 418 MTERGIQPDLVTYNTLISGYSMKGDVKDALRI 449
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 146/330 (44%), Gaps = 2/330 (0%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ + ++ + +R PN+ Y +I+ + R D + + + + +
Sbjct: 163 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 222
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+I Y + G++ A+ M +V T+NL+++ L E +
Sbjct: 223 LIGGYCDQ-GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 281
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+ D NIL+ G C+ GN++ A + + ++ V TY+ L++ L +KG V+E
Sbjct: 282 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 341
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L + GI D V +N LI+ G ++ +++ M+ K P+ +Y ++ G
Sbjct: 342 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 401
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L R EA++L+ M + P V+Y LI G + V+D + +M+ +GF P
Sbjct: 402 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 461
Query: 373 MGMWREIV-GCVTFGKDNRNRVYVTETVDS 401
+ + ++ G G+ + V E V++
Sbjct: 462 LLTYNALIQGLCKNGQGDDAENMVKEMVEN 491
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 10/220 (4%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S + S + + +L+ L SA + ++ +L + + NI+L+ LC G
Sbjct: 74 MKSLSLPISTASLHPLLSALPSAPAFA----LFADMFRLRLPLCTTTFNIMLRHLCSAGK 129
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFN 272
A +L + P+ PN TY+T++ G C +G V+ A ++ M E GI + T+
Sbjct: 130 PARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 185
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKG-CYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
+ISG K G+V+E +K+ + M KG P + Y ++ G D+ + A RM+
Sbjct: 186 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 245
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ + +Y L+H L + ++++M +G P
Sbjct: 246 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 285
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+H L AF L M + T TFNI++ L GK ++LL +M
Sbjct: 86 LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP---- 141
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICER--MSPSFVSYKKLIHGLCNQKLVEDV 357
PN+ +Y V+ G + R A +++ R + ER ++P+ +Y +I G C V++
Sbjct: 142 RPNAVTYNTVIAGFCSRGRVQAALDIM-REMRERGGIAPNQYTYGTVISGWCKVGRVDEA 200
Query: 358 DWVLKKMVQQGFV-PRMGMWREIVG 381
V +M+ +G V P M+ ++G
Sbjct: 201 VKVFDEMLTKGEVKPEAVMYNALIG 225
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 126/283 (44%), Gaps = 9/283 (3%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D P+ Y+ +IN + D + D QRI + YN I A +
Sbjct: 83 DCPPDVVSYSTVINGFFKEGDLDKMLD--QRISPNVVT-------YNSIIAALCKAQTVD 133
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KA+E L M P T+N +++ S+ E GVE D N L+
Sbjct: 134 KAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLM 193
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC+NG A + D K+ +P++ TY TL+ G KG + E GLL+ M GI
Sbjct: 194 DYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 253
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ F+IL+ KQ KVEE M + +M+ +G PN+ +Y V+ L R +A
Sbjct: 254 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLY 313
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+MI E + P + Y LIH LC E + + +M+ +G
Sbjct: 314 FEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRG 356
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V T+N ++ L A+ + + T+ K GV D N ++ G C +G + A
Sbjct: 114 PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVF 173
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + EP+V TY++LM LC+ G EA + + M G+ D T+ L+ G
Sbjct: 174 LKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYAT 233
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G + E LL+ M G +PN + ++ +++ EA + +M + ++P+ V+
Sbjct: 234 KGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 293
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y +I LC VED ++M+ +G P ++ ++
Sbjct: 294 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 12/311 (3%)
Query: 70 DPISVISVLNQYSKRKDYN--------PNEALYTLIINKLAQAKRFD-AIEDIMQRIKVE 120
D +S +V+N + K D + PN Y II L +A+ D A+E + +K
Sbjct: 87 DVVSYSTVINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+ D YN I +G+ +AI L M S P V T+N +++ L
Sbjct: 147 VM---PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 203
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E + I+ S K G++ D LL+G G L +LD + PN +S L+
Sbjct: 204 EARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 263
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
++ VEEA + +M +G++ + VT+ +I L K G+VE+ M E+M +G
Sbjct: 264 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLR 323
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P+S Y +++ L ++ +A+EL M+ + S + + +I C + V + +
Sbjct: 324 PDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKL 383
Query: 361 LKKMVQQGFVP 371
MV+ G P
Sbjct: 384 FDLMVRIGVKP 394
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 9/182 (4%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQ--NCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D NILL GLC+ + A +L +C P+V +YST+++G ++G+
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGD------ 103
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L++M + I + VT+N +I+ L K V++ M++L M G P+ +Y +++G
Sbjct: 104 -LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 162
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ EA + +M + + P V+Y L+ LC + + M ++G P +
Sbjct: 163 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDIT 222
Query: 375 MW 376
+
Sbjct: 223 TY 224
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA--DTVTFN 272
E A +V DE ++ P+V +Y+ L++GLC++ +EA LL M +G D D V+++
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
+I+G K+G L++M + PN +Y ++ L + +A E++ M+
Sbjct: 93 TVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P ++Y ++HG C+ ++ LKKM G P + + ++
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLM 193
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 133/323 (41%), Gaps = 47/323 (14%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--VEKLCRFSDGFFYNVIKIYGNM 140
+++ NPN Y +I+ L ++ R +ED M + +++ R D YN + +
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGR---VEDAMLYFEQMIDEGLR-PDSIVYNSLIHSLCI 338
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ KA E +M S FN +++ E ++ ++GV+ D
Sbjct: 339 FDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
Query: 201 LNILLKGLCENGNLEAAFYVL-----------DEFP----------KQNCEPNVRTYSTL 239
L L + +L Y + E P + P + TY+ +
Sbjct: 399 LGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNII 458
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+HGLC+ ++A + + + + + TFNI+I L K G+ +E L G
Sbjct: 459 LHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 518
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED--V 357
PN +Y+ + A+ ++G+ + E + F+S + N V+ +
Sbjct: 519 VPNYWTYRLM------------AENIIGQGLLEELDQLFLSMED------NGCTVDSGML 560
Query: 358 DWVLKKMVQQGFVPRMGMWREIV 380
++++++++Q+G + R G + ++
Sbjct: 561 NFIVRELLQRGEITRAGTYLSMI 583
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 17/226 (7%)
Query: 112 DIMQRIKVE----KLCRF------SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC-- 159
D+M RI V+ L RF F N+ I+ NM+ K ET + N
Sbjct: 385 DLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTAS 444
Query: 160 ----WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
P + T+N++L+ L KL + ++ + + ++++A NI++ L + G +
Sbjct: 445 NSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRND 504
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A + F PN TY + + +G +EE L ME G D+ N ++
Sbjct: 505 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 564
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
L ++G++ L + K + AS + LL ++ E
Sbjct: 565 RELLQRGEITRAGTYLSMIDEKH-FSLEASTASLFIDLLSGGKYQE 609
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 118/240 (49%), Gaps = 1/240 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACC 200
G + +A + + S PS+KT N L LV A + ++ + V ++
Sbjct: 164 GSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYS 223
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
++K LC+ G ++A F +L E + +P V TY+ LM LC+ G VEEAF L RME
Sbjct: 224 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 283
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ VTF ILI+GL + + E +L+ M+ G PN Y E++ K
Sbjct: 284 QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCS 343
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A L M+ ++M P+ V+Y + LC + +E + +L+ M+ G G++ +V
Sbjct: 344 QALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVV 403
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 151/350 (43%), Gaps = 38/350 (10%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ + ++IN LA+ +RF + ++Q ++E+L + YN + + G S+A
Sbjct: 288 TPSVVTFGILINGLARGERFGEVGIVLQ--EMEQLGVSPNEVIYNELIGWHCRKGHCSQA 345
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +M P+ T+NL+ L + I +G+ + N ++
Sbjct: 346 LRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAW 405
Query: 208 LCENGN-LEAAFYVLDEFPKQNCEPN---------------------------------- 232
L + LE+ + +E + PN
Sbjct: 406 LLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGV 465
Query: 233 -VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+ T + L+HGLCE ++EA +++ M ++GI+ D++T+NI+I G K K+EE +KL
Sbjct: 466 NLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLH 525
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
M +G P+ ++ +L+ + + E L+ +M E + P VSY +I G C
Sbjct: 526 GDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKA 585
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVDS 401
K + L +++ +G P + ++ ++G D + ET+ S
Sbjct: 586 KDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKS 635
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 111/223 (49%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G+ +A+ F + ++ T N +++ L K E + + G+E+D+
Sbjct: 445 GGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSIT 504
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI+++G C++ +E A + + ++ +P++ T++TL+H C G +EE F LL++M+
Sbjct: 505 YNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMK 564
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+EG+ D V++ +I G K + + + L + +G PN Y ++ G
Sbjct: 565 TEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDIS 624
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
A + V M + P+ V+Y L++ +C+ LVE+ + +
Sbjct: 625 GAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQ 667
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 134/294 (45%), Gaps = 3/294 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
V ++ + ++ NE YT +I L +A + DA +++ + L YNV+
Sbjct: 207 VFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGL--QPTVVTYNVLMD 264
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+GR+ +A M PSV TF +++N L + +GE+ + +LGV
Sbjct: 265 ALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSP 324
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ N L+ C G+ A + DE + +P TY+ + LC++G +E A +L
Sbjct: 325 NEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERIL 384
Query: 257 ERMESEGIDADTVTFNILISG-LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
E M S G+ FN +++ L++ ++E + + M +G PN + L
Sbjct: 385 EDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCK 444
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ EA + + + + + + + LIHGLC K +++ V++ M+ +G
Sbjct: 445 GGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGI 498
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 1/216 (0%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
F ++ Y N+ G++ + L M + P + ++ +++ AK + + T
Sbjct: 540 FNTLLHAYCNL-GKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTEL 598
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G++ + N L+ G NG++ A ++ +P TY +LM+ +C G V
Sbjct: 599 MDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLV 658
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EEA + + +D + + I+I G K GK+ E + E M+ +G PN +Y +
Sbjct: 659 EEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTL 718
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
+Y EA +L M+ + P ++Y LI
Sbjct: 719 MYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 754
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 130/305 (42%), Gaps = 15/305 (4%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
SV+S+ N+ R PN+ L T + +L + + I + + G N
Sbjct: 415 SVVSITNEMVTR-GMRPNDPLMTACMRELCKGGKHQEAVGIWFKT-------LNKGLGVN 466
Query: 133 VIK----IYGNMAGR-ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+ I+G G+ + +A + + M + T+N+++ E ++
Sbjct: 467 LATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHG 526
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ G + D N LL C G +E F++LD+ + +P++ +Y T++ G C+
Sbjct: 527 DMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAK 586
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ +A L + G+ + +N LI G + G + + +E MK G P + +Y
Sbjct: 587 DIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYG 646
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVLKKMVQ 366
++Y + EAK + + + + Y +I G C K+VE V + ++M
Sbjct: 647 SLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAY-FEEMRS 705
Query: 367 QGFVP 371
+G P
Sbjct: 706 RGISP 710
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 8/238 (3%)
Query: 40 HQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIIN 99
H D +K D + +L + NL +L+Q K + P+ Y II+
Sbjct: 525 HGDMTRRGFK---PDLFTFNTLLHAYCNLGKMEETFHLLDQM-KTEGLQPDIVSYGTIID 580
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYN 158
+AK ++ + + L + F YN +I YG G IS AI+ + M S
Sbjct: 581 GHCKAKDIRKAKEYLTELMDRGL--KPNVFIYNALIGGYGR-NGDISGAIDAVETMKSNG 637
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
P+ T+ ++ + A L E + I++ A + V++ I+++G C+ G + A
Sbjct: 638 IQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAV 697
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
+E + PN TY+TLM+ + GN EEA L + M G+ D +T+ LI+
Sbjct: 698 AYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIA 755
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFNILI 275
AF VL + P+++T + + L G ++ A + + M ES + + ++ +I
Sbjct: 172 AFRVLS---SRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMI 228
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
L K GKV+ G ++L + G P +Y ++ L R EA L GRM M+
Sbjct: 229 KALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMT 288
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
PS V++ LI+GL + +V VL++M Q G P ++ E++G
Sbjct: 289 PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIG 334
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 132/257 (51%), Gaps = 6/257 (2%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D + YN++ +AG + +A+E DM ++ P + T+N++ N ++ G I G +
Sbjct: 304 DVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILAN---GFRILGLISGAW 360
Query: 187 TSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
++ G+ D IL+ G C+ GN+E +F + ++ Q + ++ TY+ L+ L
Sbjct: 361 KVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSL 420
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C+ G ++EA LL ME G+ D +T+++LI GL K+G VEE ++L E M K YPNS
Sbjct: 421 CKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNS 480
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
++ GL +K EA+ + ++ + Y +I G + + K+
Sbjct: 481 FVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQ 540
Query: 364 MVQQGFVPRMGMWREIV 380
++++G P + + ++
Sbjct: 541 IIEKGISPTIVTFNSLI 557
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 137/282 (48%), Gaps = 8/282 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR---FSDGFFYNVIKIYGNMAGRIS 145
P+ Y+++I+ L KR A+E+ ++ E++C + + F + I G IS
Sbjct: 443 PDLLTYSVLIHGLC--KR-GAVEEAIEL--YEEMCSKRIYPNSFVCSAIISGLFEKGAIS 497
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A + + + +N++++ GE Y + G+ N L+
Sbjct: 498 EAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLI 557
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C+ G L A +LD P TY+TLM+G CE+G++ F +L ME++ I
Sbjct: 558 YGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIK 617
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+T+ +++ GL K+G++ E ++LL+ M +G +P+ +Y V+ +A +L
Sbjct: 618 PTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQL 677
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+M+ + PS V+Y LI+GLC ++D D +L + Q
Sbjct: 678 HNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQ 719
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A+ L + PSV +FN +++ + + K G+ D N
Sbjct: 250 RLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYN 309
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
ILL GLC G++E A ++ EP++ TY+ L +G G + A+ +++RM
Sbjct: 310 ILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLN 369
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G++ D VT+ ILI G + G +EE KL E+M +G + +Y +L L R EA
Sbjct: 370 GLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEA 429
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ M + P ++Y LIHGLC + VE+ + ++M + P
Sbjct: 430 VILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYP 478
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 145/306 (47%), Gaps = 6/306 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKAIETLF 152
YT++++ L ++ R D ++ ++V L D Y+V+ I+G G + +AIE
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLK--PDLLTYSVL-IHGLCKRGAVEEAIELYE 469
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M S +P+ + +++ L E Q + S K V + NI++ G + G
Sbjct: 470 EMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLG 529
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
N+ A + ++ P + T+++L++G C+KG + EA LL+ ++ G+ +VT+
Sbjct: 530 NIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYT 589
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
L++G ++G + +L M+ K P +Y V+ GL + R E+ +L+ M
Sbjct: 590 TLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYAR 649
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNR 390
+ P ++Y +I C ++ + +M+Q P + ++ CV +
Sbjct: 650 GLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDA 709
Query: 391 NRVYVT 396
+R+ VT
Sbjct: 710 DRLLVT 715
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 98/195 (50%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M Y P V ++N++L+ L A E GVE D NIL G G
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A+ V+ P++ TY+ L+ G C+ GN+EE+F L E+M S+G+ VT+ +
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+S L K G+++E + LL M+ G P+ +Y +++GL + EA EL M +R
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475
Query: 334 MSPSFVSYKKLIHGL 348
+ P+ +I GL
Sbjct: 476 IYPNSFVCSAIISGL 490
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 3/229 (1%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A + A+ L M N S+ T+N +LL + + + +Y GV +
Sbjct: 181 AEMVHDALFVLAKMKVLNLQVSIATYN---SLLYNLRHTDIMWDVYNEIKASGVPQNEYT 237
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
IL+ GLC L+ A L E + P+V +++ LM G C+ G+V+ A M
Sbjct: 238 NPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMI 297
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ D ++NIL+ GL G +EE ++ M+ G P+ +Y + G
Sbjct: 298 KYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLIS 357
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A ++V RM+ ++P V+Y LI G C +E+ + +KM+ QG
Sbjct: 358 GAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 130/292 (44%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ N ++QR+ + L D Y ++ G I ++
Sbjct: 338 PDIVTYNILANGFRILGLISGAWKVVQRMLLNGLN--PDLVTYTILICGHCQMGNIEESF 395
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M S S+ T+ ++L+ L + E + +G++ D ++L+ GL
Sbjct: 396 KLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGL 455
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G +E A + +E + PN S ++ GL EKG + EA + + + +
Sbjct: 456 CKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEI 515
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ +NI+I G K G + E ++ +++ KG P ++ ++YG K + EA +L+
Sbjct: 516 ILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT 575
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P+ V+Y L++G C + + + +L +M + P + +V
Sbjct: 576 IKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVV 627
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 115/242 (47%), Gaps = 4/242 (1%)
Query: 130 FYNV-IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYT 187
YN+ I Y + G I +A+ + + P++ TFN L+ KL ++ + T
Sbjct: 517 LYNIMIDGYAKL-GNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT 575
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
G+ + L+ G CE G++ + F +L E + +P TY+ ++ GLC++G
Sbjct: 576 IKVH-GLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEG 634
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+ E+ LL+ M + G+ D +T+N +I K +++ +L +M P+ +Y
Sbjct: 635 RLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYN 694
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ GL +A L+ + + + + V+Y +I C + V++ +MV++
Sbjct: 695 VLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVER 754
Query: 368 GF 369
GF
Sbjct: 755 GF 756
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 105/231 (45%), Gaps = 2/231 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++++A++ L + + P+ T+ ++N ++ ++ AK ++
Sbjct: 564 GKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAK-AIKPTQIT 622
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+++KGLC+ G L + +L + P+ TY+T++ C+ ++++AF L +M
Sbjct: 623 YTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQML 682
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ VT+N+LI+GL G +++ +LL ++ + +Y ++ K
Sbjct: 683 QHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQ 742
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A +M+ S Y +I+ LC + L+ D + M+ G P
Sbjct: 743 NALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPP 793
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%)
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
V +E N T L+ GLC + +++A L E V+FN L+SG
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K G V+ M G P+ SY +L+GL EA E M + P V
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIV 341
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+Y L +G L+ V+++M+ G P +
Sbjct: 342 TYNILANGFRILGLISGAWKVVQRMLLNGLNPDL 375
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 89/214 (41%), Gaps = 2/214 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P YT ++N + ++ D++ ++ + + Y V+ GR+ +++
Sbjct: 583 PTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIK--PTQITYTVVVKGLCKEGRLHESV 640
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L M + +P T+N V+ A + ++ + ++ N+L+ GL
Sbjct: 641 QLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 700
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C GNL+ A +L Q+ Y+T++ C KG+V+ A +M G +
Sbjct: 701 CVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSI 760
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
++ +I+ L K+ + + M G P+
Sbjct: 761 RDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPD 794
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 92/220 (41%), Gaps = 8/220 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P + YT+++ L + R +++ + L F D YN + A +
Sbjct: 614 KAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGL--FPDQITYNTVIQSFCKAHDL 671
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDACCL 201
KA + M ++ PS T+N+++N L +YG ++ + + + +
Sbjct: 672 QKAFQLHNQMLQHSLQPSPVTYNVLINGLC---VYGNLKDADRLLVTLQDQSIRLTKVAY 728
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++K C G+++ A + ++ E ++R YS +++ LC++ + +A M +
Sbjct: 729 TTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLT 788
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GI D ++++ + G ++ M G P
Sbjct: 789 HGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 2/286 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ +++ +A R A + + ++K D YNV+ G++ +A+E L D
Sbjct: 338 YSYLMDAFGKAGR--AAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLED 395
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P +T+N+V+++L S Y + + + D N LL GL +
Sbjct: 396 MNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRR 455
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A + DE C P++ T+ TL+ L + G +E+A R+ G ++ +N
Sbjct: 456 TDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNA 515
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LISG + G+V++G +L + M C+P+S +Y ++ G + A EL+ M+ E
Sbjct: 516 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 575
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+P+ +Y LI L VED + K+M+ +GF P M + +
Sbjct: 576 HTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 8/229 (3%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK P+ Y ++I+ L+ R++ +K K D YN + R
Sbjct: 398 RKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRK--HSPDVVTYNTLLNGLKKLRR 455
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA---KLGVEIDACC 200
+A + +M + C P + TF +++ L A G ++ +A K+G ++
Sbjct: 456 TDEACDLFDEMQANKCMPDLTTFGTLIDTLAKA---GRMEDALEQSARLVKMGHAPNSYI 512
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C +G ++ + + + + +C P+ TY+ L+ G +G+ A LL+ M
Sbjct: 513 YNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMV 572
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EG T+N+LI L G+VE+ L + M KG P+ +Y +
Sbjct: 573 REGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 2/256 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +Y ++I+ L + + D ++++ + + + D YN++ + GR KA
Sbjct: 368 PDTVVYNVLISCLGKQGKVDEALELLEDMNRKGI--MPDCRTYNIVIDVLSSCGRYEKAY 425
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M P V T+N +LN L + E ++ D L+ L
Sbjct: 426 SFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTL 485
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G +E A K PN Y+ L+ G C G V++ + L + M D+
Sbjct: 486 AKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDS 545
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+ IL+ G ++G M+LL+ M +G P A+Y ++ L + +A L
Sbjct: 546 ITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKE 605
Query: 329 MICERMSPSFVSYKKL 344
MI + +P +Y L
Sbjct: 606 MIAKGFNPDMQTYSAL 621
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 129/311 (41%), Gaps = 8/311 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
++K +E T I +A DA ++ ++ C+ D + +
Sbjct: 45 RQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQ-PDTVAFTAAMHWLCEVR 103
Query: 143 RISKAIETLFD--MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-VEIDAC 199
R+ +A+ TLFD + +C P V +N ++ A ++ + G + +A
Sbjct: 104 RVEQAM-TLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAV 162
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+ L+ LC+ A V E + +V +TL+H C G + +A LL M
Sbjct: 163 SFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHM 222
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ D T+ IL++ + G++ E +E + GC ++ +Y ++ G + R
Sbjct: 223 TAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRL 282
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA +L + + P +Y LI LC K +E+ + ++ Q G V + + +
Sbjct: 283 AEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYL 341
Query: 380 VGCVTFGKDNR 390
+ FGK R
Sbjct: 342 MD--AFGKAGR 350
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 3/201 (1%)
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
Y K G+ +DA ++K +C+ G E +L E ++ + T + +
Sbjct: 6 YKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGR 65
Query: 246 KGNVEEAFGLLERMESEGI-DADTVTFNILISGLRKQGKVEEGMKLLERMKGK-GCYPNS 303
G+++ A G+L+ M DTV F + L + +VE+ M L + M+ C P+
Sbjct: 66 AGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDV 125
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+Y ++ G A ++ R+ E P+ VS+ L+ LC D V +
Sbjct: 126 VAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQ 185
Query: 363 KMVQQGFVPRMGMWREIVGCV 383
+M+ G + + ++ C
Sbjct: 186 EMLGAGLKADVNVCNTLIHCT 206
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 166/380 (43%), Gaps = 50/380 (13%)
Query: 58 PTEVLKIFSNLR-DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
P +++ ++R P + + D+ +E ++ I++ L A +M+R
Sbjct: 85 PHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMER 144
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVS 175
+ ++ + V+ + +AG + + +FD M P VK N +L +L
Sbjct: 145 VVSFEM--------HGVVDVL--IAGHVXCLL--VFDKMIRNGLLPDVKNCNRILRVLRD 192
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
L + + +Y + G++ N +L C+ G ++ A +L E ++ C PN T
Sbjct: 193 ENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVT 252
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y+ L++GL +KG +E+A GL+E M + G++ T+N LI+G ++G E L+E M
Sbjct: 253 YNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMV 312
Query: 296 GKGCYPNSASYQEVLYGL----------------LDKKRFP------------------- 320
+ +P ++Y ++YGL L K P
Sbjct: 313 NRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCIS 372
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA L + C + P+ ++Y LIHGLC ++ + K+M QG P + + +V
Sbjct: 373 EAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILV 432
Query: 381 -GCVTFGKDNRNRVYVTETV 399
GC G + R + E +
Sbjct: 433 NGCFKLGYVSMARGFFNEML 452
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 137/306 (44%), Gaps = 3/306 (0%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ +L++ +R Y PN+ Y +++N L++ + + +++ + L + YN +
Sbjct: 235 LELLSEMQERGCY-PNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLN--VSAYTYNPL 291
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G +A + + +M + +P++ T+N ++ L ++ ++ K
Sbjct: 292 INGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKF 351
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D N LL G C G + AF + DE ++ P V TY+TL+HGLC G ++ A
Sbjct: 352 TPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALR 411
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L + M +G+ D T+ IL++G K G V M KG P+ +Y + G +
Sbjct: 412 LKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEM 471
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
A + M+ P ++Y +H LC Q E+ +L+ MV G +P
Sbjct: 472 KIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHV 531
Query: 375 MWREIV 380
+ I+
Sbjct: 532 TYTSII 537
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 13/252 (5%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
M G + A+ +M +P + T+ +++N +G + G++ D
Sbjct: 402 MWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRF 461
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N + G + + AF + +E P+V TY+ +H LC++GN EEA LLE M
Sbjct: 462 AYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENM 521
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S+G+ D VT+ +I+G K G + + ++ M KG P+ +Y +++ K+
Sbjct: 522 VSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQML 581
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-------- 371
A +M+ + + + ++Y +I+GLC + +++ +M ++G +P
Sbjct: 582 DLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTIL 641
Query: 372 -----RMGMWRE 378
MG W E
Sbjct: 642 INESCNMGYWEE 653
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 137/346 (39%), Gaps = 63/346 (18%)
Query: 88 NPNEALYTLIINKLAQ----AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
N + Y +IN Q + FD +E+++ R L + + Y + K R
Sbjct: 282 NVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTY-NTLMYGLCKWVQVTGVR 340
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC---- 199
+ + DM P + +FN + LYG + S A L + C
Sbjct: 341 LRFS-----DMLKSKFTPDIVSFN--------SLLYGYCRTGCISEAFLLFDELKCRDLV 387
Query: 200 ----CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE---- 251
N L+ GLC G L+AA + E Q P++ TY+ L++G + G V
Sbjct: 388 PTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGF 447
Query: 252 -------------------------------AFGLLERMESEGIDADTVTFNILISGLRK 280
AF + E M + G D +T+N+ + L +
Sbjct: 448 FNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQ 507
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
QG EE LLE M G P+ +Y ++ G + +A+E+ M+ + ++PS V+
Sbjct: 508 QGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVT 567
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVT 384
Y LIH +++++ KM+++ + + I+ C+T
Sbjct: 568 YTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMT 613
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 12/243 (4%)
Query: 127 DGFFYNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D F YN +I G M S A +M + P V T+N+ ++ L + E +
Sbjct: 459 DRFAYNT-RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDL 517
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ G+ D ++ G +NG+L A V +E + P+V TY+ L+H
Sbjct: 518 LENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAA 577
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
K ++ AF +M + + A+ +T+N +I+GL +++E K + M+ KG PN S
Sbjct: 578 KQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFS 637
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL----------CNQKLVE 355
Y ++ + + EA L M+ ++ P ++ + L C + L++
Sbjct: 638 YTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQ 697
Query: 356 DVD 358
+V+
Sbjct: 698 NVE 700
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 123/297 (41%), Gaps = 18/297 (6%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K +D P Y +I+ L DA + + + + L F D F Y ++ G
Sbjct: 382 KCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGL--FPDIFTYTILVNGCFKLG 439
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA--------KLGV 194
+S A +M S P +N ++ GE++ TS A G
Sbjct: 440 YVSMARGFFNEMLSKGLKPDRFAYN--------TRIVGEMKIADTSVAFSMQEEMLAAGF 491
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D N+ + LC+ GN E A +L+ P+ TY+++++G + G++ +A
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ M S+G+ VT+ +LI + ++ +M K N +Y ++ GL
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+R EA + M + + P+ SY LI+ CN E+ + ++M+ + P
Sbjct: 612 MTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQP 668
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 107/231 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGR + A++ M + P+ +N +L LV + + +Y G +
Sbjct: 150 AGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ GLC+ G A + DE + PNV+ Y+ L+ LC G ++EA LL M+
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMK 269
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G D VT+N +SGL K G+V E + L ++ G Y ++ GL +RF
Sbjct: 270 DKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFD 329
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E M+ +SP V Y +I G +ED L M ++GFVP
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVP 380
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 15/305 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +YT++++ L A + D ++ +K +K C D YN GR+++A
Sbjct: 240 PNVKIYTVLLSSLCNAGKIDEAVQLLGSMK-DKGC-LPDEVTYNAFLSGLCKVGRVNEAF 297
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L + +K ++ +++ L A+ + E G Y + + + D I+++G
Sbjct: 298 QRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGC 357
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
E G +E A LD K+ P+ Y+T++ LC+ G++E A L M + D+
Sbjct: 358 AEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDS 417
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T I+I GL K+G V+E M++ + M GC P +Y ++ G + R EA+ L +
Sbjct: 418 TTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHK 477
Query: 329 MICERMSPSFV-------------SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
M F+ S +KL+H +C V +L+ ++ G VP +
Sbjct: 478 MEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537
Query: 376 WREIV 380
+ ++
Sbjct: 538 YNTLI 542
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 138/303 (45%), Gaps = 21/303 (6%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ +I+ L QA+RFD + + + D Y ++ AGRI A+ L
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNIS--PDVVLYTIMIRGCAEAGRIEDALSFLDV 372
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILLKGLCE 210
M P +N VL +L +G+++ +T +++ + +D+ I++ GLC+
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCD---HGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME---------- 260
G ++ A + DE + C+P V TY+ L+ G +G +EEA L +ME
Sbjct: 430 RGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLR 489
Query: 261 -SEGID--ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+ G + D+ + L+ + + G+V + KLL + G P+ +Y ++ GL +
Sbjct: 490 LTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKAR 549
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
A L + + +SP ++Y LI GL D + + ++Q G P + ++
Sbjct: 550 NLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYN 609
Query: 378 EIV 380
++
Sbjct: 610 SMM 612
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 116/288 (40%), Gaps = 35/288 (12%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F YN I +G I A+ M + C P+ T+N++++ L + G+ ++
Sbjct: 172 AFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFD 231
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
G+ + +LL LC G ++ A +L + C P+ TY+ + GLC+ G
Sbjct: 232 EMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVG 291
Query: 248 NVEEA-----------------------------------FGLLERMESEGIDADTVTFN 272
V EA FG + M I D V +
Sbjct: 292 RVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYT 351
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
I+I G + G++E+ + L+ MK KG P++ Y VL L D A L M+
Sbjct: 352 IMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN 411
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + +I GLC + LV++ + +M + G P + + ++
Sbjct: 412 NLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 129/290 (44%), Gaps = 52/290 (17%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF-SDGFFYN-VIKI---YGN 139
++ +P+ LYT++I A+A R IED + + V K F D F YN V+K+ +G+
Sbjct: 341 RNISPDVVLYTIMIRGCAEAGR---IEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGD 397
Query: 140 MA-------------------------------GRISKAIETLFDMPSYNCWPSVKTFNL 168
+ G + +A++ +M + C P+V T+N
Sbjct: 398 LERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNA 457
Query: 169 VLNLLVSAKLYGEIQGIYTSAA---------KLGVEIDACC----LNILLKGLCENGNLE 215
+++ E + ++ +L + + C L L+ +C++G +
Sbjct: 458 LIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVL 517
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A+ +L P+V TY+TL++GLC+ N++ A L + ++ +GI D +T+ LI
Sbjct: 518 KAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLI 577
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
GL + + + M L + + G P+ + Y ++ L K+ +A L
Sbjct: 578 DGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL 627
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 64/157 (40%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
EA F L + + ++ L+ G +A RM+ +N +
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTI 178
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
+ L G + + L RM GC PN A+Y ++ GL + +A ++ M+ +
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P+ Y L+ LCN +++ +L M +G +P
Sbjct: 239 MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLP 275
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%)
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E F L + G+ A + F L++ G+ + ++ RM P + Y +
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTI 178
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L L+D A L RM+ +P+ +Y L+ GLC Q + D + +M+ +G
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238
Query: 370 VPRMGMW 376
+P + ++
Sbjct: 239 MPNVKIY 245
>gi|388512253|gb|AFK44188.1| unknown [Medicago truncatula]
Length = 376
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 163/334 (48%), Gaps = 16/334 (4%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKD---YNPNEALYTLIINKLAQAKRFDAIEDI 113
SP + I +L ++ +++ ++ K D + +Y + +LA AKRF + DI
Sbjct: 16 SPNNIKSISQDLYKEQNLKTLVEKFKKASDIDRFRKKNGIYEDTVRRLAGAKRFRWVRDI 75
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNL 172
++ K ++GF +I +YG + + + LFD MP NC SV + N +L
Sbjct: 76 IEHQKSYADIS-NEGFSARLITLYGK--SNMHRHAQKLFDEMPQRNCERSVLSLNALLAA 132
Query: 173 LVSAKLYGEIQGIYTS-AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
+ +K Y ++ ++ +L V+ D N +K L E G+ ++A VL+E K E
Sbjct: 133 YLHSKQYDVVERLFKKLPVQLSVKPDLVSYNTYIKALLEKGSFDSAVSVLEEMEKDGVES 192
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
++ T++TL+ GL KG E+ L E++ + + + T+N + GL + E ++
Sbjct: 193 DLITFNTLLDGLYSKGRFEDGEKLWEKLGEKNVVPNIRTYNARLLGLAVAKRAGEAVEFY 252
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E M+ KG P+ S+ ++ G ++ EAK+ G + PS +Y ++ LC +
Sbjct: 253 EEMEKKGVKPDLFSFNALIKGFANEGNLDEAKKWFGEIEKSEHDPSKRTYAIIVPFLCEK 312
Query: 352 KLVEDVDWVLKKMVQQGFVPR----MGMWREIVG 381
D+ + +MV+Q F+ R + + R +VG
Sbjct: 313 G---DLKTAI-EMVKQIFLTRCRVDVSLLRIVVG 342
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 2/207 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y I L + FD+ +++ ++EK SD +N + GR
Sbjct: 157 PDLVSYNTYIKALLEKGSFDSAVSVLE--EMEKDGVESDLITFNTLLDGLYSKGRFEDGE 214
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + N P+++T+N L L AK GE Y K GV+ D N L+KG
Sbjct: 215 KLWEKLGEKNVVPNIRTYNARLLGLAVAKRAGEAVEFYEEMEKKGVKPDLFSFNALIKGF 274
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
GNL+ A E K +P+ RTY+ ++ LCEKG+++ A +++++ D
Sbjct: 275 ANEGNLDEAKKWFGEIEKSEHDPSKRTYAIIVPFLCEKGDLKTAIEMVKQIFLTRCRVDV 334
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMK 295
I++ L + V E +++ER K
Sbjct: 335 SLLRIVVGKLVSESMVSEAKEIVERGK 361
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 175/390 (44%), Gaps = 23/390 (5%)
Query: 20 SSASTITRKRTFALASPSASHQDSDHHAYKLNH-KDWLSPTEVLK-IFSNLRDPISVISV 77
S ST T + +P+ S + H KL +P+ +L+ +F++ P ++
Sbjct: 34 SPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLILCY 93
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
K N + +++ LA AK ++ I ++ K +S+ ++ + +
Sbjct: 94 FKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSF--AKNAHYSNSTIFHSLSVL 151
Query: 138 GNMA-----------------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
G+ G + A+E Y S + N +L LV G
Sbjct: 152 GSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIG 211
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
++ +Y + + ++ ++++ GLC+ G + A V+++ P+V TY+T++
Sbjct: 212 VVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTII 271
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
G C+ G + +A LL+ M ++ I + +TFNILI G + V K+ E M+ +G
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
PN +Y ++ GL + EA L +M + P+ V+Y LI+G C +K++++ +
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391
Query: 361 LKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
L + ++G P + + ++ +GK R
Sbjct: 392 LDDIGKRGLAPNVITFNTLID--AYGKAGR 419
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 140/287 (48%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +PNE + ++I+ + + A + + + ++ + L + YN + G++
Sbjct: 293 KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ--PNVVTYNSLINGLCSNGKL 350
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ M P+V T+N ++N K+ E + + K G+ + N L
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ + G ++ AF + PNV TY+ L+ G C +GNV+EA L + ME G+
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
AD VT+NIL+ L K+G+ + ++LL+ M G P+ +Y ++ G + A
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALN 530
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ M + + V+Y LI G CN+ +E+ + +L +M+++G +P
Sbjct: 531 VRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIP 577
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 141/301 (46%), Gaps = 4/301 (1%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF- 130
I V+ + + R+ N + ++IN L + +F D+++ +K FS
Sbjct: 210 IGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG---FSPSVIT 266
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN I AG++ KA L +M + P+ TFN++++ + + ++
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ G++ + N L+ GLC NG L+ A + D+ +PNV TY+ L++G C+K ++
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA +L+ + G+ + +TFN LI K G++++ L M G PN ++Y ++
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
G + EA++L M + V+Y L+ LC + +L +M + G
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLN 506
Query: 371 P 371
P
Sbjct: 507 P 507
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 2/240 (0%)
Query: 142 GRISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GRI +E+++ +M +V TF++V+N L + + + G
Sbjct: 208 GRIG-VVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVIT 266
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ G C+ G + A +L E + PN T++ L+ G C NV A + E M+
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G+ + VT+N LI+GL GK++E + L ++M G G PN +Y ++ G KK
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA+E++ + ++P+ +++ LI ++D + M+ G P + + ++
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 113/244 (46%), Gaps = 24/244 (9%)
Query: 89 PNEALYTLIINKLAQAKRF----DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
PN Y +IN + K + ++DI +R + F+ +I YG AGR+
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN-----TLIDAYGK-AGRM 420
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYTSAAKLGVEID 197
A M P+V T+N ++ N+ + KL E++G G++ D
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN-------GLKAD 473
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
NIL+ LC+ G A +LDE + P+ TY+ L+ G +GN A +
Sbjct: 474 LVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRT 533
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
ME +G A+ VT+N+LI G +GK+EE +LL M KG PN +Y + +++K
Sbjct: 534 LMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593
Query: 318 RFPE 321
P+
Sbjct: 594 FIPD 597
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 4/277 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+R+ PN Y +IN L + D E + + K+ + + YN + I G
Sbjct: 326 QRQGLQPNVVTYNSLINGLCSNGKLD--EALGLQDKMSGMGLKPNVVTYNAL-INGFCKK 382
Query: 143 RISK-AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
++ K A E L D+ P+V TFN +++ A + + + GV +
Sbjct: 383 KMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTY 442
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C GN++ A + E + ++ TY+ L+ LC+KG +A LL+ M
Sbjct: 443 NCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFE 502
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G++ +T+N LI G ++G + + M+ KG N +Y ++ G +K + E
Sbjct: 503 VGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEE 562
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
A L+ M+ + + P+ +Y L + + + D+D
Sbjct: 563 ANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDID 599
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%)
Query: 126 SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
+D YN++ G KA+ L +M PS T+N +++ +
Sbjct: 472 ADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNV 531
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
T K G + N+L+KG C G LE A +L+E ++ PN TY L + E
Sbjct: 532 RTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMME 591
Query: 246 KGNVEEAFGLL 256
KG + + G L
Sbjct: 592 KGFIPDIDGHL 602
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ F +L + K Y + + T GV + LNIL+ C + AF V
Sbjct: 63 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K +P+ T++TL+ GLC +G + EA L ++M EG + VT+ LI+GL K
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++LL M+ C P+ Y ++ L ++ EA L +M+ + +SP +
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y L+H LCN + V +L +MV +P + ++ +V
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 282
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ P+V T N+++N G + KLG + D L++GLC G
Sbjct: 91 MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 150
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A ++ D+ + +PNV TY TL++GLC+ GN A LL ME D V +
Sbjct: 151 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 210
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I L K +V E L +M G+G P+ +Y +++ L + + L+ +M+ +
Sbjct: 211 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 270
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P V + ++ LC + V + ++ M+Q+G P
Sbjct: 271 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 308
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 136/293 (46%), Gaps = 4/293 (1%)
Query: 74 VISVLNQYSKR--KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
V N +S+ + +P+ YT +++ L + + ++ ++ K+ D +
Sbjct: 221 VTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI--LPDVVIF 278
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ + G++++A E + M P V T+ +++ E ++ +
Sbjct: 279 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 338
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G D L+ G C+ ++ A Y+ +E ++ P+ +TY+TLM+GLC G +++
Sbjct: 339 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQD 398
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A L M + G D VT++IL+ L K +EE M LL+ ++ P+ Y ++
Sbjct: 399 AIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIID 458
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
G+ A++L + + + PS +Y +IHGLC + L+ + + + +M
Sbjct: 459 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 511
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 2/230 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ A L + P TF L+ L V K+ GE ++ G + +
Sbjct: 115 RVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKI-GEALHLFDKMIDEGFQPNVVTY 173
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC+ GN AA +L + NC+P+V Y++++ LC+ V EAF L +M
Sbjct: 174 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVG 233
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI D T+ L+ L + + LL +M P+ + V+ L + + E
Sbjct: 234 QGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTE 293
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A E+V MI + P V+Y L+ G C Q +++ V MV++GF P
Sbjct: 294 AHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 343
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 147/334 (44%), Gaps = 6/334 (1%)
Query: 49 KLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKD--YNPNEALYTLIINKLAQAKR 106
KL H+ PT + L + L+ + K D + PN Y +IN L +
Sbjct: 128 KLGHQP--DPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 185
Query: 107 FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF 166
A +++ ++ + C+ D Y I ++++A M P + T+
Sbjct: 186 TSAAIRLLRSME-QGNCQ-PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTY 243
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
+++ L + + + + + D + ++ LC+ G + A ++D +
Sbjct: 244 TSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ 303
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+ EP+V TY+TLM G C + ++EA + + M +G D +++ LI+G K K+++
Sbjct: 304 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDK 363
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
M L E M K P++ +Y ++YGL R +A L M+ P V+Y L+
Sbjct: 364 AMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLD 423
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LC + +E+ +LK + P + ++ I+
Sbjct: 424 SLCKNRHLEEAMALLKAIEASNLNPDIQVYNIII 457
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+I KA+ +M P KT+N ++ L + ++ G D +
Sbjct: 360 KIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYS 419
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
ILL LC+N +LE A +L N P+++ Y+ ++ G+C G +E A L + S+
Sbjct: 420 ILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSK 479
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ T+NI+I GL K+G + E KL M G C P+ +Y + G L A
Sbjct: 480 GLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRA 539
Query: 323 KELVGRMICERMS 335
+L+ M+ S
Sbjct: 540 IQLLEEMLARGFS 552
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 145/320 (45%), Gaps = 11/320 (3%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDA---I 110
D + T ++ NL + V ++LNQ K P+ +++ +++ L + + I
Sbjct: 239 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKIL-PDVVIFSTVVDALCKEGKVTEAHEI 297
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
D+M + VE D Y + + + +A++ M P V ++ ++
Sbjct: 298 VDMMIQRGVE-----PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 352
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
N + ++ + D N L+ GLC G L+ A + E +
Sbjct: 353 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQM 412
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P++ TYS L+ LC+ ++EEA LL+ +E+ ++ D +NI+I G+ + G++E L
Sbjct: 413 PDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 472
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG-LC 349
+ KG +P+ +Y +++GL + EA +L M SP +Y + G L
Sbjct: 473 FSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQ 532
Query: 350 NQKLVEDVDWVLKKMVQQGF 369
N + + + +L++M+ +GF
Sbjct: 533 NNETLRAIQ-LLEEMLARGF 551
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 99/231 (42%), Gaps = 25/231 (10%)
Query: 60 EVLKIFSNL------RDPISVISVLNQYSK---------------RKDYNPNEALYTLII 98
E +K+F + D IS +++N Y K RK++ P+ Y ++
Sbjct: 328 EAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLM 387
Query: 99 NKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY 157
L R DAI + + ++ D Y+++ + +A+ L + +
Sbjct: 388 YGLCHVGRLQDAIALFHEMVARGQM---PDLVTYSILLDSLCKNRHLEEAMALLKAIEAS 444
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
N P ++ +N++++ + A + ++++ + G+ NI++ GLC+ G L A
Sbjct: 445 NLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEA 504
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ E +C P+ TY+T+ G + A LLE M + G AD+
Sbjct: 505 NKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 166/342 (48%), Gaps = 20/342 (5%)
Query: 45 HHAYKLNHKDWLSPTEVLK------IFSNLRDPISVISVLNQYSKRKDYNP-NEALYTLI 97
H+ ++ N + S +EVL + +RD + + S+ + P N Y+ +
Sbjct: 41 HNQWEENLQTRFSESEVLASDVAHLVLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSL 100
Query: 98 INKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL-FDMPS 156
+ LA+++ F +E +++ ++VE++ + VI+ Y + +G + KA+E F + +
Sbjct: 101 LKLLARSRVFSEMEVVLENMRVEEMSPTREAMSI-VIQAYSD-SGLVEKALELYYFVLKT 158
Query: 157 YNCWPSVKTFNLVLNLLV-------SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
Y +P V N +LN+LV + KLY E+ I + + C I++KGLC
Sbjct: 159 YTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTC---IMVKGLC 215
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G LE ++++ Q C PN+ Y+TL+ G C+KG++E A GL ++ +G
Sbjct: 216 KEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVE 275
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+ +I+G K+G + +LL M +G N Y ++ +A E + M
Sbjct: 276 TYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGM 335
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I P V+Y LI G C V + D +L++ + +G +P
Sbjct: 336 IECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMP 377
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 2/289 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K + P Y IIN + F AI+ ++ + L + YN I G
Sbjct: 266 KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLT--VNVQVYNTIIDARYKHG 323
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
I KA+ET+ M C P + T+N +++ E + A G+ +
Sbjct: 324 HIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYT 383
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ C+ G + A L E ++ +P++ TY L+HGL G V+ A + E+M
Sbjct: 384 PLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLER 443
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D +NIL+SGL K+ K+ LL M + P++ Y ++ G + EA
Sbjct: 444 GVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEA 503
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++L I + M+P V Y +I G C +++D + +M ++ P
Sbjct: 504 RKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAP 552
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 119/243 (48%), Gaps = 6/243 (2%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDA 198
G +A L +M P + T+ +++ LV A GE+ T K+ GV DA
Sbjct: 393 GGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVA---GEVDVALTIREKMLERGVFPDA 449
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
NIL+ GLC+ L AA +L E Q+ P+ Y+TL+ G GN++EA L E
Sbjct: 450 GIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFEL 509
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
+G++ V +N +I G K G +++ M + RMK + P+ +Y V+ G + +
Sbjct: 510 TIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHD 569
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
A+++ M+ + P+ V+Y LI+G C + + + ++M G VP + +
Sbjct: 570 LDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSI 629
Query: 379 IVG 381
++G
Sbjct: 630 LIG 632
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 135/325 (41%), Gaps = 34/325 (10%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +Y ++++ L + + A + ++ + + + D F Y + G + +A
Sbjct: 447 PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSV--LPDAFVYATLVDGFIRNGNLDEA- 503
Query: 149 ETLFDMP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
LF++ P + +N ++ + + K + D + ++ G
Sbjct: 504 RKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDG 563
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ +L+ A + E K C+PNV TY++L++G C KG++ + + M++ G+ +
Sbjct: 564 YVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPN 623
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL-------LDKK--R 318
VT++ILI K+ K+ + E M C PN ++ ++ G + +K
Sbjct: 624 VVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNE 683
Query: 319 FPEAKE-----LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-- 371
F E K+ GRMI + +P +Y ++ LC + + KM +G +P
Sbjct: 684 FQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDS 743
Query: 372 --------------RMGMWREIVGC 382
R W+ IV C
Sbjct: 744 VSFVALLHGVCLEGRSKEWKNIVSC 768
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 119/287 (41%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN+ YT +I+ + +D + + I++ + D Y + +AG +
Sbjct: 373 KGLMPNKFSYTPLIHAYCKQGGYDRASNWL--IEMTERGHKPDLVTYGALVHGLVVAGEV 430
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+ M +P +N++++ L + + V DA L
Sbjct: 431 DVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATL 490
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G NGNL+ A + + ++ P + Y+ ++ G C+ G +++A + RM+ +
Sbjct: 491 VDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 550
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D T++ +I G KQ ++ K+ M C PN +Y ++ G K + +
Sbjct: 551 APDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLK 610
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ M + P+ V+Y LI C + + D ++M+ VP
Sbjct: 611 IFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVP 657
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 124/291 (42%), Gaps = 34/291 (11%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI-KVEKLCRFSDGFFYNVIKI 136
L + + K NP Y +I +F ++D M I +++K D F Y+ + I
Sbjct: 506 LFELTIEKGMNPGIVGYNAMIKGYC---KFGMMKDAMACINRMKKRHLAPDEFTYSTV-I 561
Query: 137 YGNMAGRISKAIETLF-DMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQGIYTS 188
G + + +F +M C P+V T+ ++N L S K++ E+Q
Sbjct: 562 DGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQAC--- 618
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG------ 242
G+ + +IL+ C+ L A +E C PN T++ L++G
Sbjct: 619 ----GLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGT 674
Query: 243 --LCEKGNVEEA------FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
+ EKGN + RM S+G + +N ++ L + G ++L +M
Sbjct: 675 RAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKM 734
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
KGC P+S S+ +L+G+ + R E K +V + ER V+Y ++
Sbjct: 735 TSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSIL 785
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 123/240 (51%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + K D+ SY P V++++++++ L A E I+ + + G +DA
Sbjct: 275 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 334
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ G C++G + A+ +L+E ++ +P V TY ++ GL + ++EA+ L E +
Sbjct: 335 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 394
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+GI+ + V ++ LI G K G+++E +LE M KG PN ++ +L L+ +
Sbjct: 395 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN 454
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA M + P+ +Y LI+GLC + + M +QG VP + + ++
Sbjct: 455 EALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMI 514
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 138/323 (42%), Gaps = 38/323 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + P++ YT +I L +A R E++ +++ E+ + YN + + AG
Sbjct: 10 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER--SVPCAYAYNTMIMGYGSAG 67
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R A + L + C PSV +FN +L L + E ++ K E ++ N
Sbjct: 68 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYN 126
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ LC G +E A+ +LDE + PN+ T + ++ LC+ +EEA+ + E
Sbjct: 127 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 186
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + D VT+ LI GL K+G+V+E +L E+M G N Y ++ R +
Sbjct: 187 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 246
Query: 323 ----KELV--------------------------GRMICERMS-----PSFVSYKKLIHG 347
KEL+ GRMI E + P SY LIHG
Sbjct: 247 HKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHG 306
Query: 348 LCNQKLVEDVDWVLKKMVQQGFV 370
L + + M QQGF
Sbjct: 307 LTKAGQARETSNIFHAMKQQGFA 329
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++I+ L +A + +I +K + D YN + +G++ KA
Sbjct: 295 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFAL--DARAYNAVVDGFCKSGKVHKAY 352
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M P+V T+ +++ L E ++ A G+E++ + L+ G
Sbjct: 353 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 412
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G ++ A+ +L+E K+ PNV T+++L+ L + + EA + M+ +T
Sbjct: 413 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNT 472
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T++ILI+GL + K + + M+ +G PN +Y ++ GL +A L R
Sbjct: 473 YTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 532
Query: 329 MICERMSPSFVSYKKLIHGLCN 350
P S+ LI G+ N
Sbjct: 533 FKANGGIPDAASFNALIEGMSN 554
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 135/295 (45%), Gaps = 8/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA- 147
PN +++++L +A++ + I + ++ C + ++I G G++ +A
Sbjct: 155 PNLLTVNIMVDRLCKARKLEEAYKIFESAS-QRGCNPDCVTYCSLIDGLGK-KGQVDEAY 212
Query: 148 --IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
E + D +N P V T +L+ N + + + I+ + G + D LN +
Sbjct: 213 RLFEKMLD-AGHNANPVVYT-SLIRNFFIHGR-KEDGHKIFKELIRRGCKPDLTLLNTYM 269
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
+ + G +E + ++ P+VR+YS L+HGL + G E + M+ +G
Sbjct: 270 DCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 329
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D +N ++ G K GKV + ++LE MK K P A+Y ++ GL R EA L
Sbjct: 330 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 389
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + V Y LI G +++ +L++M+++G P + W ++
Sbjct: 390 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 444
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K P A Y I++ LA+ R D + + K K + + ++I +G + G
Sbjct: 359 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK-SKGIELNVVLYSSLIDGFGKV-G 416
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI +A L +M P+V T+N +L+ LV A+ E + S ++ + +
Sbjct: 417 RIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYS 476
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ GLC AF + KQ PNV TY+T++ GL + GN+ +A+ L ER ++
Sbjct: 477 ILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKAN 536
Query: 263 GIDADTVTFNILISGLRKQGKVEEG 287
G D +FN LI G+ + E
Sbjct: 537 GGIPDAASFNALIEGMSNANRAMEA 561
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G++ D ++ LC+ G L A + + + P Y+T++ G G E+A
Sbjct: 13 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 72
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ LLER+ G V+FN +++ L K+ KV+E + L E MK K PNS++Y ++
Sbjct: 73 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDM 131
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L R EA ++ M + P+ ++ ++ LC + +E+ + + Q+G P
Sbjct: 132 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP 190
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A+ E Q +P+ +Y++++ LC+ G + EA L +ME+E +N +I
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G G+ E+ KLLER++ +GC P+ S+ +L L K++ EA L ++ + P
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ +Y +I LC VE+ +L +M P +
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNL 157
>gi|326497659|dbj|BAK05919.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 523
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 147/340 (43%), Gaps = 41/340 (12%)
Query: 95 TLIINKLAQAKRFDAIEDIMQRIK--VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
+ +++L ++ D + D++ ++ K + YN++ + G A L
Sbjct: 174 AVCLDRLVSSRCPDVLADLIADLRDLRNKYLPAPNTCVYNILIKHYVKNGDSETAFRVLD 233
Query: 153 DMPSYNCW---PSVKTFNLVLNLLVSAKLYGEIQGIYTSA-AKLGVEIDACCLNILLKGL 208
+M Y C P++ T++ +L L A E ++ K + D N+++ G
Sbjct: 234 EMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNVIIDGF 293
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G +E A + K CEPN Y+TL++G C+KG+VE A + E M S G++ D
Sbjct: 294 CRLGQVEKARTIFGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAGVEPDA 353
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V++ LI L + G V+EG+ L+ M+ KGC + +Y +L GL R E +L+GR
Sbjct: 354 VSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVMDLLGR 413
Query: 329 M------------------ICER-----------------MSPSFVSYKKLIHGLCNQKL 353
+ +C P + + KL+ GLC+
Sbjct: 414 LPEEGVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLGRGFLPHYAASNKLLIGLCDVGR 473
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRV 393
V D L + + GF+P W +++ V + R V
Sbjct: 474 VADATAALYGLAKFGFMPEASCWAKLIEAVCRDRKLRRSV 513
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 8/245 (3%)
Query: 89 PNEALYTLIIN---KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
P++ Y +II+ +L Q ++ I M++ + E + F Y + G +
Sbjct: 281 PDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEP-----NAFNYATLINGHCKKGDVE 335
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A +M S P ++ ++ L E + + G + D N+LL
Sbjct: 336 NAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNLLL 395
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
+GLC++G + +L P++ + NV +Y +M+ LC G++E+A GLL M G
Sbjct: 396 EGLCKDGRMAEVMDLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLGRGFL 455
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
N L+ GL G+V + L + G P ++ + +++ + ++ + EL
Sbjct: 456 PHYAASNKLLIGLCDVGRVADATAALYGLAKFGFMPEASCWAKLIEAVCRDRKLRRSVEL 515
Query: 326 VGRMI 330
+ +I
Sbjct: 516 LDILI 520
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 17/310 (5%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN-------MAGRISK 146
Y +I+ L + F + ++Q + K + F +I+ GN +G I+
Sbjct: 16 YCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKGNQRSDIYVFSGLITA 75
Query: 147 AIETLFDMPSYNC---------WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+E+ F + C W T +L LV K + + Y + G
Sbjct: 76 YLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWAFYEEILECGYPAS 135
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
NIL+ C+ G++ A V D K P+V +Y+TLM+G G++ E F L
Sbjct: 136 LYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKS 195
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M + G+ D T+++LI+GL K+ K+++ +L E M KG PN ++ ++ G
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNG 255
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
R A E+ +M+ + + P ++Y LI+GLC + + ++ +M +G P +
Sbjct: 256 RVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYT 315
Query: 378 EIV-GCVTFG 386
++ GC G
Sbjct: 316 TLIDGCCKEG 325
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + E + +
Sbjct: 137 YFFNILMHRFCKEGDIRLA-QSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKS 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + +E + PN T++TL+ G C+ G
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G + + L++ M KG P+ +Y
Sbjct: 256 RVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + ++++M+
Sbjct: 316 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSF 375
Query: 368 GFVPRMGMWREIV 380
G P G + I+
Sbjct: 376 GLKPDTGTYTMII 388
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 132/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ I++ G +++ + M +
Sbjct: 153 RLAQS-VFDAITKWGLRPSVVSYNTLMNGY----IRL-----GDLNEGFKLKSAMHASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
V + Q+ P++ TY+TL++GLC+KG + +A L++ M +G+ D +T+ LI G
Sbjct: 263 VYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G P
Sbjct: 383 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHAP 414
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 37/253 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + + V+ L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFEEMLVKGL--VPNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 261 MEVYKQMLSQSLLPDLITYN-----------------------------------TLIYG 285
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G L A ++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 286 LCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 345
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K++ M G P++ +Y ++ K + +L+
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLK 405
Query: 328 RMICERMSPSFVS 340
M + +PS V+
Sbjct: 406 EMQRDGHAPSVVT 418
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 123/234 (52%), Gaps = 3/234 (1%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-VEIDAC 199
AG +++A+E M S +C PS+ T+N+++N +A +G+ ++ S + VE D
Sbjct: 23 AGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRW 82
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ GLC +GN E A +L E +N NV TYS+++ L ++ EE++ +LE M
Sbjct: 83 TYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEM 142
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ G + D FN ++ G + +E+ ++ + M G P++ SY +++GL +
Sbjct: 143 MAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKL 202
Query: 320 PEAKELVGRMICERMS--PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E+ +++ M P+ +++ LIHGLC +E V M++ G P
Sbjct: 203 DESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKP 256
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 143/313 (45%), Gaps = 5/313 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++IN A F D+ Q +K EK D + YN + +G A
Sbjct: 43 PSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVE-PDRWTYNTLISGLCSSGNTEGAR 101
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M N +V T++ ++ LV E + G D N +++G
Sbjct: 102 KLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGF 161
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER--MESEGIDA 266
+ N+E A V + +P+ +Y L+HGL + G ++E+ +L M + G
Sbjct: 162 ARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVP 221
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ +TF+ LI GL + G++E+ +++ M GC PN +Y ++ GL ++ +A+EL
Sbjct: 222 NVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELF 281
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV-QQGFVPRMGMWREIV-GCVT 384
+M + P V+Y LI G C + +++ + + ++M G P + + ++ G
Sbjct: 282 EKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCK 341
Query: 385 FGKDNRNRVYVTE 397
GK R V E
Sbjct: 342 LGKLGRANELVAE 354
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L+ GLC G LE A V + C+PN TY+TL+ GLC V +A L E+M
Sbjct: 226 FSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMT 285
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK-GKGCYPNSASYQEVLYGLLDKKRF 319
I D V +N LI+G K+G ++E KL M G G P ++ ++ G +
Sbjct: 286 QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKL 345
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A ELV M + ++ +Y+ LI GL +++ V K+M ++ F+ +
Sbjct: 346 GRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFL------LDP 399
Query: 380 VGCVTF 385
V CV+F
Sbjct: 400 VSCVSF 405
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 123/304 (40%), Gaps = 46/304 (15%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK---- 135
Q+ Y P+ Y ++I+ LA+ + D I+ + + + G+ NVI
Sbjct: 175 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMR-----AAGYVPNVITFSTL 229
Query: 136 IYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
I+G G + KA+E M C P+ T+
Sbjct: 230 IHGLCRTGELEKALEVFGSMLEAGCKPNKYTYT--------------------------- 262
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
L+ GLC + A + ++ + P+ Y++L+ G C++G+++EA
Sbjct: 263 --------TLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEK 314
Query: 255 LLERMES-EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L M G+ VTFN LI G K GK+ +L+ M KG ++ +Y+ ++ GL
Sbjct: 315 LYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGL 374
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ EA E+ +M ++ VS + GLC ++ V + + G VP
Sbjct: 375 SRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNP 434
Query: 374 GMWR 377
+R
Sbjct: 435 ETFR 438
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN+ YT +I L +A++ ++ + K+ + C D YN + G + +A
Sbjct: 256 PNKYTYTTLIAGLCRAEKVIQARELFE--KMTQACIPPDAVAYNSLIAGYCKRGSMDEAE 313
Query: 149 ETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +M P++ TFN +++ G + G+ D C IL+ G
Sbjct: 314 KLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAG 373
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L L+ A V + ++ + + + + GLC+ GN+++A+ + E G +
Sbjct: 374 LSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPN 433
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGK 297
TF IL L K G+VE+ KL+E K +
Sbjct: 434 PETFRILSESLIKLGRVEDAQKLMEPAKAR 463
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 136/285 (47%), Gaps = 2/285 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y II+ L++A + + + I+ L D + + + G++++A
Sbjct: 506 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL--KPDAVTFGAFILGYSKTGKMTEAA 563
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +M + P+ + +++N A E I+ LGV D + + GL
Sbjct: 564 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGL 623
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+NG ++ A V E ++ P+V TYS+L+ G C++G VE+AF L + M +GI +
Sbjct: 624 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 683
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+N L+ GL K G ++ KL + M KG P+S +Y ++ G + EA L
Sbjct: 684 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 743
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
M + + P Y L+HG C + +E + ++M+Q+GF +
Sbjct: 744 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL 788
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 3/318 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
K NPNE +Y+L+I + Q D ++ + + + L + + Y +I A R
Sbjct: 256 EKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGL--VPNTYTYTIITAGLCRAKR 313
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+++A T +M P + +++ + E+ I G+ I+ N+
Sbjct: 314 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 373
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+ G +E A +L C+PN RT+ L+ G C + N+ A LL+ ME
Sbjct: 374 LIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 433
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ V++ +I+GL + KLLE+M G PN Y ++ + R EA+
Sbjct: 434 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEAR 493
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE-IVGC 382
L+ M C ++P Y +I L +E+ L ++ +G P + I+G
Sbjct: 494 RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 553
Query: 383 VTFGKDNRNRVYVTETVD 400
GK Y E +D
Sbjct: 554 SKTGKMTEAAKYFDEMLD 571
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 3/297 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ +L++ KR + P+ Y +IN L K +++++ L + Y+++
Sbjct: 423 LELLDEMEKR-NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL--KPNVVVYSIL 479
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+ GRI +A L M P + +N +++ L A E G+
Sbjct: 480 IMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 539
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ DA + G + G + A DE PN Y+ L++G + GN+ EA
Sbjct: 540 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 599
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ R+ + G+ D T + I GL K G+V+E +K+ +K KG P+ +Y ++ G
Sbjct: 600 IFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 659
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +A EL M + ++P+ Y L+ GLC ++ + M ++G P
Sbjct: 660 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 716
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 5/300 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +Y+++I A R + ++ + + D F YN I + AG++ +A
Sbjct: 471 PNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVA--PDIFCYNAIISCLSKAGKMEEAS 528
Query: 149 ETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L ++ P TF +L + K+ E + G+ + +L+ G
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT-EAAKYFDEMLDHGLMPNNPLYTVLING 587
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ GNL A + P+V+T S +HGL + G V+EA + ++ +G+ D
Sbjct: 588 HFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 647
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T++ LISG KQG+VE+ +L + M KG PN Y ++ GL A++L
Sbjct: 648 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 707
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
M + + P V+Y +I G C + V + + +M +G P ++ +V GC G
Sbjct: 708 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 767
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + A L +M P+ ++LV+ + E + S + G+ +
Sbjct: 241 TGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYT 300
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
I+ GLC + A +E K +P+ S L+ G +G+++E + + M
Sbjct: 301 YTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMV 360
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S GI + +T+N+LI GL K GK+E+ ++L+ M GC PNS ++ ++ G +
Sbjct: 361 SCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMG 420
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A EL+ M + PS VSY +I+GLC+ K + + +L+KM G P + ++ ++
Sbjct: 421 RALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILI 480
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 35/293 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDA-----------------------IEDIMQRIKVEKLCRF 125
PN YT+I L +AKR + I+ M+ ++++ R
Sbjct: 296 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 355
Query: 126 SDGFF----------YNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
D YNV+ I+G G++ KA E L M + C P+ +TF L++
Sbjct: 356 KDVMVSCGIPINLITYNVL-IHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYC 414
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
G + K + A ++ GLC +L A +L++ +PNV
Sbjct: 415 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 474
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
YS L+ +G +EEA LL+ M G+ D +N +IS L K GK+EE L +
Sbjct: 475 VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 534
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+G+G P++ ++ + G + EA + M+ + P+ Y LI+G
Sbjct: 535 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 587
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
AK+G D L+ LC+ G+L A VL E ++ PN YS ++ G+C+ G++
Sbjct: 222 AKMG--FDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDI 279
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+EA L M +G+ +T T+ I+ +GL + ++ E E M+ G P+ + +
Sbjct: 280 DEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSAL 339
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ G + + E + M+ + + ++Y LIHGLC +E +LK MV G
Sbjct: 340 IDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGC 399
Query: 370 VP 371
P
Sbjct: 400 KP 401
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 145/345 (42%), Gaps = 30/345 (8%)
Query: 60 EVLKIFSNLR------DPISVISVLNQYSKR---------------KDYNPNEALYTLII 98
E LK+FS L+ D + S+++ + K+ K PN +Y ++
Sbjct: 631 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 690
Query: 99 NKLAQA---KRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
+ L ++ +R + D M +E D Y+ + + +++A +MP
Sbjct: 691 DGLCKSGDIQRARKLFDGMPEKGLE-----PDSVTYSTMIDGYCKSENVAEAFSLFHEMP 745
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
S P +N +++ + ++ + G N L+ G C++ ++
Sbjct: 746 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQ 804
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A + E + P+ TY+T++ C+ G +EEA L + M+ + DTVT+ L+
Sbjct: 805 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
G K G+ E L E+M KG P+ +Y V+Y + EA +L ++ + M
Sbjct: 865 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 924
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ LI LC ++ + + +L +M + G P + +V
Sbjct: 925 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLV 969
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
F+++++ + E ++ A + I N LLK L + G +E + V +
Sbjct: 160 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGM 219
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+V TY+ L+ LC+ G++ A +L M+ +G++ + ++++I G+ + G +
Sbjct: 220 LDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDI 279
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+E ++L M KG PN+ +Y + GL KR EAK M + P + + L
Sbjct: 280 DEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSAL 339
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
I G + +++V + MV G + + ++ G FGK
Sbjct: 340 IDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGK 383
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%)
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G +E A + E ++N + TY++LM+G + G E F L E+M ++G+ D
Sbjct: 833 CKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDE 892
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ ++I K+ + E KL + + GKG + ++ L ++ EA +L+
Sbjct: 893 VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDE 952
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + PS + L+ +++ V + + G VP
Sbjct: 953 MGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVP 995
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 98/223 (43%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+I +A + +M + P T+ V++ A E ++ + + +D
Sbjct: 802 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 861
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G + G F + ++ + +P+ TY +++ C++ N+ EAF L + + +
Sbjct: 862 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 921
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ ++LI+ L K+ + E KLL+ M G P+ A+ ++ + + EA
Sbjct: 922 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEA 981
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+ + + P + L++G N ED ++K++V
Sbjct: 982 TRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 85 SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 144
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 145 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324
Query: 381 -GCVTFG 386
GC G
Sbjct: 325 DGCCKEG 331
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 132/255 (51%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 143 YFFNILMHRFCKDGDIRJA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 199
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 260 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKIT 319
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 320 YTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 366 QQGFVPRMGMWREIV 380
G P + I+
Sbjct: 380 SVGLKPDARTYTMII 394
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 111/211 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 210 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G K
Sbjct: 270 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCK 329
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 330 EGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDART 389
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 390 YTMIINEFCKKGDVWKGXKLLKEMQRDGHVP 420
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 209 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV--PNGVTFTTLIDGHCKNGRVDLA 266
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 267 MEIYKQMLSQSLSPDLITYN-----------------------------------TLIYG 291
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ A +++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 292 LCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLD 351
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G P++ +Y ++ K + +L+
Sbjct: 352 EVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLK 411
Query: 328 RMICERMSPSFVSYKKLIHG 347
M + PS V+Y L++G
Sbjct: 412 EMQRDGHVPSVVTYNVLMNG 431
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 4/234 (1%)
Query: 142 GRISKAIET--LFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
G I +A+E +FD M C V +N +L L E ++ GVE DA
Sbjct: 228 GDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDA 287
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
C I ++ CE N+ + F VLD + + PNV TY+ ++ LC+ G VE+A+ LL
Sbjct: 288 CSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHE 347
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G+ D ++N +++ + +V KL+ M C P+ SY +L L+ R
Sbjct: 348 MMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGR 407
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK-LVEDVDWVLKKMVQQGFVP 371
F A E+ M PS +Y +IHGLC +K +E+ + M+ +G P
Sbjct: 408 FDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPP 461
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 134/328 (40%), Gaps = 35/328 (10%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ +E Y +++N L +++F + D + ++ + + V + Y A S
Sbjct: 108 FEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSR-ANLPSD 166
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLL---------------------VSAKLYG----- 180
AI M + PSV + +L +L AK Y
Sbjct: 167 AIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRG 226
Query: 181 --------EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
E + ++ G +D N LL+ LC+ GN++ A+ + E EP+
Sbjct: 227 WGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPD 286
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+Y+ + CE N+ F +L+RM+ + + T+N +I L K GKVE+ +LL
Sbjct: 287 ACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLH 346
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M +G P++ SY +L + A +L+ M+ + P SY L+ L
Sbjct: 347 EMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVG 406
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + M ++GF P + + ++
Sbjct: 407 RFDRATEIWESMGERGFYPSVSTYSVMI 434
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEID 197
A I L M Y+ P+V T+N ++ L G+++ Y ++ GV D
Sbjct: 300 ANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKN---GKVEDAYQLLHEMMERGVSPD 356
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A N +L CE+ + A ++ K NC P+ +Y+ L+ L G + A + E
Sbjct: 357 AWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWE 416
Query: 258 RMESEGIDADTVTFNILISGL-RKQGKVEEGMKLLERMKGKGCYPNSASYQEVL------ 310
M G T++++I GL +K+GK+EE + E M +G P AS E+L
Sbjct: 417 SMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEG-IPPYASTIEMLRNRLIG 475
Query: 311 YGLLD 315
+GLLD
Sbjct: 476 FGLLD 480
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 11/189 (5%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
SV SVL++ KR D PN Y II KL + + + ++ + + D + YN
Sbjct: 305 SVFSVLDRM-KRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVS--PDAWSYN 361
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
I Y +++A + + M NC P ++N++L LLV + I+ S +
Sbjct: 362 TILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGER 421
Query: 193 GVEIDACCLNILLKGLC-ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G ++++ GLC + G LE A + + P T L + L
Sbjct: 422 GFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLRNRLI------- 474
Query: 252 AFGLLERME 260
FGLL+ +E
Sbjct: 475 GFGLLDHIE 483
>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 136/277 (49%), Gaps = 4/277 (1%)
Query: 89 PNEALYTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y II L +FD A+E R ++ + C + +I++ G + +A
Sbjct: 125 PDVITYNTIIRSLFDNGKFDQAVE--FWRGQLRRGCLPYLIPYTILIELVWKHCGTV-RA 181
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E L DM C+P + T+N ++N Y + I + G+E +A N LL
Sbjct: 182 LEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHS 241
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC G + +L K + P V TY+ L++GLC+ G VE A +M SE D
Sbjct: 242 LCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPD 301
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+N L++ L K+G V+E +++ + C P +Y V+ GL + EA +L
Sbjct: 302 IITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYN 361
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+MI + ++P ++++ L+ G C VED +L++M
Sbjct: 362 QMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREM 398
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 142/295 (48%), Gaps = 6/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P L L+ + + +ED+ +E + D YN + + + G+ A
Sbjct: 164 PYTILIELVWKHCGTVRALEVLEDM----AIEGC--YPDLVTYNSLVNFASKEGKYEDAA 217
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
++++ S+ P+ T+N +L+ L S L+ E+ I K NIL+ GL
Sbjct: 218 LIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGL 277
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G +E A + +NC P++ TY+TL+ LC++G V+EA + +
Sbjct: 278 CKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGL 337
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+N +I GL ++G ++E +KL +M KG P+ +++ +++G + +A E++
Sbjct: 338 ITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILRE 397
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
M + +Y+ +I+GLC K V+ VL+ M+ + P ++ ++ V
Sbjct: 398 MGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSV 452
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V T+N+++N L L + D N LL LC+ G ++ A V
Sbjct: 265 PTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQV 324
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
NC P + TY+T++ GL +G ++EA L +M +GI D +T L+ G
Sbjct: 325 FVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCW 384
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+VE+ +++L M + NS++Y+ V+ GL KR A +++ MI R P
Sbjct: 385 IDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEI 444
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
Y LI + + +VE+ D + +K++++
Sbjct: 445 YSTLIKSVADAGMVEEADELHQKLIER 471
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 88/179 (49%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+ D N+++ G C+ L +A +L++ C P+V TY+T++ L + G ++A
Sbjct: 87 GLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQA 146
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
G + + ILI + K +++LE M +GCYP+ +Y ++
Sbjct: 147 VEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNF 206
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ ++ +A ++ ++ M P+ ++Y L+H LC+ L ++VD +L M + P
Sbjct: 207 ASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPP 265
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 138/315 (43%), Gaps = 13/315 (4%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
I ++S +NQ PN T +I L + R + +++ + + L D Y
Sbjct: 45 IDIMSRVNQI-------PNSTCSTNLIRGLVRIGRIERASRVLKTMVMSGL--VPDVITY 95
Query: 132 NVIKIYGNMAGR--ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
N++ G R + AI+ L DM C P V T+N ++ L + + +
Sbjct: 96 NMM--VGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQ 153
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ G IL++ + ++ A VL++ + C P++ TY++L++ ++G
Sbjct: 154 LRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKY 213
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E+A ++ + S G++ + +T+N L+ L G +E ++L MK P +Y +
Sbjct: 214 EDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNIL 273
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ GL A +M+ E SP ++Y L+ LC + +V++ V +
Sbjct: 274 INGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNC 333
Query: 370 VPRMGMWREIVGCVT 384
P + + ++ +T
Sbjct: 334 SPGLITYNTVIDGLT 348
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%)
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
VE D N +L LC+ G+L A ++D + N PN + L+ GL G +E A
Sbjct: 18 VENDEETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERAS 77
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+L+ M G+ D +T+N+++ G K+ ++ + LLE M GC P+ +Y ++ L
Sbjct: 78 RVLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSL 137
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
D +F +A E + P + Y LI + VL+ M +G P +
Sbjct: 138 FDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDL 197
Query: 374 GMWREIV 380
+ +V
Sbjct: 198 VTYNSLV 204
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 137/313 (43%), Gaps = 25/313 (7%)
Query: 56 LSPTEVLKIFSNLR-DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
+ P +++ S+ R P + + + + +E ++ I+ LAQ + +M
Sbjct: 79 VDPDLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVM 138
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL-----------------FD-MPS 156
+R+ + R D + I G ++ +S I L FD M
Sbjct: 139 ERVINANMHRIVD------VLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIK 192
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
P VK N +L +L L + +Y + + G++ N LL C+ G ++
Sbjct: 193 SRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQ 252
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
+L E ++ C PN TY+ L++GL +KG E+A GL+ M G+ T+N LI
Sbjct: 253 GLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIY 312
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G +G + E + L E M KG P A+Y +YGL R +A + + M+ + P
Sbjct: 313 GYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP 372
Query: 337 SFVSYKKLIHGLC 349
VSY LI+G C
Sbjct: 373 DVVSYNTLIYGYC 385
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 40/289 (13%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLY 179
+ F Y + K+ GR+S A++ L DM + N P V ++N ++ NL+ + L+
Sbjct: 343 NSFIYGLCKL-----GRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 397
Query: 180 GEIQGIY---------------------TSAAKLGVEI-------DACCLNILLKGLCEN 211
E++ IY A +L VE+ D IL+ G C+
Sbjct: 398 DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKM 457
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G+L A DE + E + Y+T + G + G+ AF L E M ++G D + +
Sbjct: 458 GSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIY 517
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N+++ GL K G +EE +LL++M G P+ +Y +++ L+ R + +E+ M+
Sbjct: 518 NVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLS 577
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++PS V+Y LIHG + +E +M ++G +P + + ++
Sbjct: 578 KGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLI 626
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ + ++ L +M C P+ T+N+++N L + + +G+ K G+++ A
Sbjct: 247 GGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 306
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G G L A + +E + P V TY++ ++GLC+ G + +A L M
Sbjct: 307 YNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML 366
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ + D V++N LI G + G + + L + ++ +P +Y +L GL +
Sbjct: 367 ANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELE 426
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF-VPRMGMWREI 379
A++L MI E ++P V+Y L++G C + +M+ +G + I
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRI 486
Query: 380 VGCVTFGKDNR 390
VG + G +R
Sbjct: 487 VGELKLGDTSR 497
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D N+++ GLC+ GNLE A +L + P+ TY++++H E G + +
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ M S+G+ VT+ +LI G +G++E M+ KG PN +Y ++ G
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLING 628
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L +R +A M+ + + P+ SY LI+ CN ++ + K+M+ +G P
Sbjct: 629 LCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQP 687
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 4/261 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKA 147
P+ YT+++N + ++ + E L D + Y +I G + G S+A
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL--DSYAY-ATRIVGELKLGDTSRA 498
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M + P + +N+V++ L E + GV D ++
Sbjct: 499 FSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHA 558
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
ENG L + E + P+V TY+ L+HG KG +E AF M+ +GI +
Sbjct: 559 HLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPN 618
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+N LI+GL K ++++ M KG +PN SY ++ + + EA L
Sbjct: 619 VITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYK 678
Query: 328 RMICERMSPSFVSYKKLIHGL 348
+M+ + P ++ L+ L
Sbjct: 679 QMLDRGVQPDSCTHSALLKQL 699
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGNM 140
K + P+ +Y ++++ L + + +++Q++ SDG + + I+ ++
Sbjct: 508 KGFPPDLIIYNVVVDGLCKLGNLEEASELLQKM-------VSDGVIPDYVTYTSIIHAHL 560
Query: 141 A-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
GR+ K E ++M S PSV T+ ++++ ++ + G+ +
Sbjct: 561 ENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVI 620
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ GLC+ ++ A+ E ++ PN +Y+ L++ C GN +EA L ++M
Sbjct: 621 TYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQM 680
Query: 260 ESEGIDADTVTFNILISGLRKQGKVE 285
G+ D+ T + L+ L K K++
Sbjct: 681 LDRGVQPDSCTHSALLKQLGKDCKLQ 706
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G A++ L + + P+V +N +++ L KL E +Y+ G+ DA
Sbjct: 129 GETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITY 188
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G C G L AF +LDE +N P V Y+ L++ LC++GNV+EA LL M
Sbjct: 189 TTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTK 248
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EGI VT++ L+ G G+V+ ++ M G PN SY ++ GL KR E
Sbjct: 249 EGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE 308
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A L+ M+ + M P V+Y LI GLC + ++ +M +G
Sbjct: 309 AMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 355
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 166/389 (42%), Gaps = 44/389 (11%)
Query: 40 HQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIIN 99
H ++++H + + L R + ++ ++ S R PN +Y II+
Sbjct: 103 HDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTR----PNVVMYNTIID 158
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKAIETLFDMPSYN 158
L + K + D+ + + F D Y + IYG + G++ A L +M N
Sbjct: 159 GLCKDKLVNEAYDLYSEMDARGI--FPDAITYTTL-IYGFCLLGQLMGAFSLLDEMILKN 215
Query: 159 CWPSVKTFNLVLNLLV------SAK--------------------------LYGEIQG-- 184
P V +N+++N L AK L GE+Q
Sbjct: 216 INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAK 275
Query: 185 -IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
I+ + ++GV + NI++ GLC+ ++ A +L E +N P+ TY++L+ GL
Sbjct: 276 QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 335
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C+ G + A L+ M G AD VT+ L+ L K +++ L +MK +G P
Sbjct: 336 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTM 395
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y ++ GL R A+EL ++ + +Y +I GLC + + ++ + K
Sbjct: 396 YTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSK 455
Query: 364 MVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
M G +P + EI+ F KD ++
Sbjct: 456 MEDNGCIPN-AVTFEIIIRSLFEKDENDK 483
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 149/324 (45%), Gaps = 17/324 (5%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ T ++ F L + S+L++ K+ NP +Y ++IN L + +++
Sbjct: 184 DAITYTTLIYGFCLLGQLMGAFSLLDEMI-LKNINPGVYIYNILINALCKEGNVKEAKNL 242
Query: 114 MQRIKVEKL-------CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF 166
+ + E + DG+ + G + A + M P+V ++
Sbjct: 243 LAVMTKEGIKPGVVTYSTLMDGYC---------LVGEVQNAKQIFHAMVQMGVNPNVYSY 293
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
N+++N L K E + + D N L+ GLC++G + +A +++E
Sbjct: 294 NIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHH 353
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+ +V TY++L+ LC+ N+++A L +M+ GI T+ LI GL K G+++
Sbjct: 354 RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKN 413
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+L + + KGC + +Y ++ GL + F EA + +M P+ V+++ +I
Sbjct: 414 AQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIR 473
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFV 370
L + + + +L +M+ +G +
Sbjct: 474 SLFEKDENDKAEKLLHEMIAKGLL 497
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
KLG + D LN L+KGLC G ++ + + D+ Q + + +Y TL++GLC+ G
Sbjct: 73 KLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETR 132
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A LL +E + V +N +I GL K V E L M +G +P++ +Y ++
Sbjct: 133 CAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLI 192
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
YG + A L+ MI + ++P Y LI+ LC + V++ +L M ++G
Sbjct: 193 YGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIK 252
Query: 371 P 371
P
Sbjct: 253 P 253
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + FN +L L K Y + G+ + LNIL+ C G + +F V
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K +P+ T +TLM GLC KG V+++ +++ ++G D V++ L++GL K
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ +KLL ++ + PN Y ++ GL K EA +L M + P ++
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187
Query: 341 YKKLIHGLC 349
Y LI+G C
Sbjct: 188 YTTLIYGFC 196
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 6/235 (2%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDA 198
G+++ + L + P T N ++ L L GE++ + G ++D
Sbjct: 59 GQMAFSFSVLGKILKLGYQPDTITLNTLMKGLC---LKGEVKKSLHFHDKVVAQGFQMDH 115
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
LL GLC+ G A +L ++ PNV Y+T++ GLC+ V EA+ L
Sbjct: 116 VSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSE 175
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M++ GI D +T+ LI G G++ LL+ M K P Y ++ L +
Sbjct: 176 MDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGN 235
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EAK L+ M E + P V+Y L+ G C V++ + MVQ G P +
Sbjct: 236 VKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNV 290
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 158/335 (47%), Gaps = 33/335 (9%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD-----GFF 130
SVL + KR Y P+ T+ +N L I+ + + +V+K F D GF
Sbjct: 114 SVLAKILKR-GYPPS----TVTLNTL--------IKGLCLKGQVKKALHFHDKLLAQGFQ 160
Query: 131 YNVIKIYGNMAGRISK------AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
N + YG + + K AI+ L + P V ++ +++ L +L E G
Sbjct: 161 LNQVG-YGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYG 219
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+++ G+ D N L+ G C G L+ A +L+ + P+V TY+ L+ LC
Sbjct: 220 LFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALC 279
Query: 245 EKGNVEEA-------FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
++G V+EA + L++ M G AD +T++ LI GL K G ++ + L +MK +
Sbjct: 280 KEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 339
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G PN ++ +L GL R +A+E+ ++ + + +Y +I+G C Q L+E+
Sbjct: 340 GIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEA 399
Query: 358 DWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
+L KM G +P + I+ F KD ++
Sbjct: 400 LTMLSKMEDNGCIPNAFTFETII-IALFKKDENDK 433
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 129/250 (51%), Gaps = 11/250 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P+ +Y+ II+ L + + + + V+ + +D YN + IYG + G++ +A
Sbjct: 196 PDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS--ADVVTYNTL-IYGFCIVGKLKEA 252
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-------GVEIDACC 200
I L M P V T+ ++++ L E + + L G D
Sbjct: 253 IGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVIT 312
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L+ GLC+NG+L+ A + ++ Q PN+ T++ L+ GL + G +++A + + +
Sbjct: 313 YSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLL 372
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++G + T+N++I+G KQG +EE + +L +M+ GC PN+ +++ ++ L K
Sbjct: 373 TKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEND 432
Query: 321 EAKELVGRMI 330
+A++L+ +MI
Sbjct: 433 KAEKLLRQMI 442
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 118/246 (47%), Gaps = 5/246 (2%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + FN +L+ K Y + + K G++ D LNIL+ C G + F V
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTVSLSHRLELK-GIQPDLFTLNILINCFCHMGQITFGFSV 115
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K+ P+ T +TL+ GLC KG V++A +++ ++G + V + LI+G+ K
Sbjct: 116 LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCK 175
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G +KLL+++ G+ P+ Y ++ L + EA L M + +S V+
Sbjct: 176 IGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 235
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG---KDNRNRV-YVT 396
Y LI+G C +++ +L MV + P + + +V + K+ + R+ YV
Sbjct: 236 YNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVW 295
Query: 397 ETVDSL 402
+ +D +
Sbjct: 296 DLIDEM 301
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 175/390 (44%), Gaps = 23/390 (5%)
Query: 20 SSASTITRKRTFALASPSASHQDSDHHAYKLNH-KDWLSPTEVLK-IFSNLRDPISVISV 77
S ST T + +P+ S + H KL +P+ +L+ +F++ P ++
Sbjct: 34 SPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLILCY 93
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
K N + +++ LA AK ++ I ++ K +S+ ++ + +
Sbjct: 94 FKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSF--AKNAHYSNSTIFHSLSVL 151
Query: 138 GNMA-----------------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
G+ G + A+E Y S + N +L LV G
Sbjct: 152 GSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIG 211
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
++ +Y + + ++ ++++ GLC+ G + A V+++ P+V TY+T++
Sbjct: 212 VVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTII 271
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
G C+ G + +A LL+ M ++ I + +TFNILI G + V K+ E M+ +G
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
PN +Y ++ GL + EA L +M + P+ V+Y LI+G C +K++++ +
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391
Query: 361 LKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
L + ++G P + + ++ +GK R
Sbjct: 392 LDDIGKRGLAPNVITFNTLID--AYGKAGR 419
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 117/228 (51%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+ KA + + DM ++ PSV T+N +++ A + + + +
Sbjct: 243 GKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITF 302
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ G C + N+ AA V +E +Q +PNV TY++L++GLC G ++EA GL ++M
Sbjct: 303 NILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSG 362
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ + VT+N LI+G K+ ++E ++L+ + +G PN ++ ++ R +
Sbjct: 363 MGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDD 422
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A L M+ + P+ +Y LI G C + V++ + K+M G
Sbjct: 423 AFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 153/339 (45%), Gaps = 42/339 (12%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF- 130
I V+ + + R+ N + ++IN L + +F D+++ +K FS
Sbjct: 210 IGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG---FSPSVIT 266
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN I AG++ KA L +M + P+ TFN++++ + + ++
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ G++ + N L+ GLC NG L+ A + D+ +PNV TY+ L++G C+K ++
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA +L+ + G+ + +TFN LI K G++++ L M G PN ++Y ++
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Query: 311 YGLLDKKRFPEAKELVGRM------------------ICER------------------- 333
G + EA++L M +C++
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKK 506
Query: 334 -MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ V+Y LI G CN+ +E+ + +L +M+++G +P
Sbjct: 507 GRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIP 545
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 2/240 (0%)
Query: 142 GRISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GRI +E+++ +M +V TF++V+N L + + + G
Sbjct: 208 GRIG-VVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVIT 266
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ G C+ G + A +L E + PN T++ L+ G C NV A + E M+
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G+ + VT+N LI+GL GK++E + L ++M G G PN +Y ++ G KK
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA+E++ + ++P+ +++ LI ++D + M+ G P + + ++
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 7/243 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+R+ PN Y +IN L + D E + + K+ + + YN + I G
Sbjct: 326 QRQGLQPNVVTYNSLINGLCSNGKLD--EALGLQDKMSGMGLKPNVVTYNAL-INGFCKK 382
Query: 143 RISK-AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
++ K A E L D+ P+V TFN +++ A + + + GV +
Sbjct: 383 KMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTY 442
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-- 259
N L+ G C GN++ A + E + ++ TY+ L+ LC+KG +A LL+ M
Sbjct: 443 NCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTL 502
Query: 260 -ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
E +G A+ VT+N+LI G +GK+EE +LL M KG PN +Y + +++K
Sbjct: 503 MEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGF 562
Query: 319 FPE 321
P+
Sbjct: 563 IPD 565
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 81/210 (38%), Gaps = 48/210 (22%)
Query: 89 PNEALYTLIINKLAQAKRF----DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
PN Y +IN + K + ++DI +R + F+ +I YG AGR+
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN-----TLIDAYGK-AGRM 420
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQG--IYTSAAKLGVE 195
A M P+V T+N ++ N+ + KL E++G + +
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNIL 480
Query: 196 IDACC-----------------------------LNILLKGLCENGNLEAAFYVLDEFPK 226
+DA C N+L+KG C G LE A +L+E +
Sbjct: 481 VDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLE 540
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ PN TY L + EKG + + G L
Sbjct: 541 KGLIPNRTTYDILRDEMMEKGFIPDIDGHL 570
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 123/240 (51%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + K D+ SY P V++++++++ L A E I+ + + G +DA
Sbjct: 541 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 600
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ G C++G + A+ +L+E ++ +P V TY ++ GL + ++EA+ L E +
Sbjct: 601 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 660
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+GI+ + V ++ LI G K G+++E +LE M KG PN ++ +L L+ +
Sbjct: 661 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN 720
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA M + P+ +Y LI+GLC + + M +QG VP + + ++
Sbjct: 721 EALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMI 780
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 38/301 (12%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + P++ YT +I L +A R E++ +++ E+ + YN + + AG
Sbjct: 276 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER--SVPCAYAYNTMIMGYGSAG 333
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R A + L + C PSV +FN +L L + E ++
Sbjct: 334 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF---------------- 377
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
E K++ EPN TY+ ++ LC G VEEA+ +L+ ME
Sbjct: 378 --------------------EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHA 417
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ + +T NI++ L K K+EE K+ E +GC P+ +Y ++ GL K + EA
Sbjct: 418 SLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEA 477
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L +M+ + + V Y LI ED + K+++++G P + + + C
Sbjct: 478 YRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDC 537
Query: 383 V 383
V
Sbjct: 538 V 538
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 3/250 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K P A Y I++ LA+ R D + + K K + + ++I +G + G
Sbjct: 625 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK-SKGIELNVVLYSSLIDGFGKV-G 682
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI +A L +M P+V T+N +L+ LV A+ E + S ++ + +
Sbjct: 683 RIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYS 742
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ GLC AF + KQ PNV TY+T++ GL + GN+ +A+ L ER ++
Sbjct: 743 ILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKAN 802
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D +FN LI G+ + E ++ E + +GC N S +L L+K E
Sbjct: 803 GGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDA-LNKSECLEQ 861
Query: 323 KELVGRMICE 332
+VG ++ E
Sbjct: 862 AAIVGAVLRE 871
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++I+ L +A + +I +K + D YN + +G++ KA
Sbjct: 561 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFAL--DARAYNAVVDGFCKSGKVHKAY 618
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M P+V T+ +++ L E ++ A G+E++ + L+ G
Sbjct: 619 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 678
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G ++ A+ +L+E K+ PNV T+++L+ L + + EA + M+ +T
Sbjct: 679 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNT 738
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T++ILI+GL + K + + M+ +G PN +Y ++ GL +A L R
Sbjct: 739 YTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 798
Query: 329 MICERMSPSFVSYKKLIHGLCN 350
P S+ LI G+ N
Sbjct: 799 FKANGGIPDAASFNALIEGMSN 820
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 135/295 (45%), Gaps = 8/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA- 147
PN +++++L +A++ + I + ++ C + ++I G G++ +A
Sbjct: 421 PNLLTVNIMVDRLCKARKLEEAYKIFESAS-QRGCNPDCVTYCSLIDGLGK-KGQVDEAY 478
Query: 148 --IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
E + D +N P V T +L+ N + + + I+ + G + D LN +
Sbjct: 479 RLFEKMLD-AGHNANPVVYT-SLIRNFFIHGR-KEDGHKIFKELIRRGCKPDLTLLNTYM 535
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
+ + G +E + ++ P+VR+YS L+HGL + G E + M+ +G
Sbjct: 536 DCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 595
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D +N ++ G K GKV + ++LE MK K P A+Y ++ GL R EA L
Sbjct: 596 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 655
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + V Y LI G +++ +L++M+++G P + W ++
Sbjct: 656 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 710
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 132/293 (45%), Gaps = 20/293 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-FYNVIKIYGNMAGRISKA 147
PN+A L L +A+R D D + + V + +F F Y V+ A R +A
Sbjct: 143 PNQACAHLA-AALVRARRLD---DAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERA 198
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL--NILL 205
+E L M V F ++ L +G A L E+ CL +I+L
Sbjct: 199 LELLRQMQEVGYEVGVHLFTTLVRALAR-------EGQVADALALVDEVKGSCLEPDIVL 251
Query: 206 KGLC-----ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+C + GN++ A+ E Q +P+ +Y++++ LC+ G + EA L +ME
Sbjct: 252 YNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME 311
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+E +N +I G G+ E+ KLLER++ +GC P+ S+ +L L K++
Sbjct: 312 AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 371
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EA L ++ + P+ +Y +I LC VE+ +L +M P +
Sbjct: 372 EALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNL 423
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+L+ L E E A +L + + E V ++TL+ L +G V +A L++ ++
Sbjct: 183 TVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKG 242
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
++ D V +N+ I K G V+ K +K +G P+ SY +++ L R E
Sbjct: 243 SCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGE 302
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A+EL +M ER P +Y +I G + ED +L+++ ++G +P + + I+
Sbjct: 303 AEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILT 362
Query: 382 CV 383
C+
Sbjct: 363 CL 364
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 16/302 (5%)
Query: 107 FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG---RI---SKAIETLFDMPSYNCW 160
DA+ K L R + F + Y +A R+ S+A++ L M
Sbjct: 172 LDALSKSRHAGKAASLVRALEQRFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIA 231
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI-----LLKGLCENGNLE 215
P+ T+N++L A + K G + ++C ++ ++ GL G LE
Sbjct: 232 PTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLE 291
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A V DE K+ C P+V TY+ L+ +C+KGNVE+A + + M +G + VT+ +LI
Sbjct: 292 KARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVVTYTVLI 351
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI-CERM 334
GL GK++ G+KLLERMK GC P +Y ++ L ++ + +L +M E
Sbjct: 352 RGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGEEC 411
Query: 335 SPSFVSYKKLIHGLCNQKLVEDV---DWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNR 390
P+ +Y +I + +K ED+ ++ +MV +G++PR M+ ++ G + G
Sbjct: 412 LPNQDTYNIIISAMFMRKRAEDMVLAARMVDEMVDRGYLPRRFMFNRVLNGLMLTGNQEL 471
Query: 391 NR 392
+R
Sbjct: 472 SR 473
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 49/277 (17%)
Query: 89 PNEALYTLIINKLAQAKR----FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
P + Y +I+ +A + +D + +R ++ C+ D Y + +AG++
Sbjct: 232 PTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCK-PDVVSYTTMVHGLGVAGQL 290
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA + +M C PSV T+ N L
Sbjct: 291 EKARKVFDEMAKEGCAPSVATY-----------------------------------NAL 315
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++ +C+ GN+E A V D + PNV TY+ L+ GLC G ++ LLERM++ G
Sbjct: 316 IQVICKKGNVEDAVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGC 375
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ T+N+LI L ++G++E+G+ L E+M KG+ C PN +Y ++ + +KR E
Sbjct: 376 EPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKR-AEDM 434
Query: 324 ELVGRMICERMS----PSFVSYKKLIHGLC---NQKL 353
L RM+ E + P + ++++GL NQ+L
Sbjct: 435 VLAARMVDEMVDRGYLPRRFMFNRVLNGLMLTGNQEL 471
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 96/221 (43%), Gaps = 6/221 (2%)
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
S+ + FN +L+ L ++ G+ + A + D N L G C +
Sbjct: 158 SHRVAQDLPLFNSLLDALSKSRHAGKAASL-VRALEQRFTPDVVTYNTLADGWCRVKDTS 216
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-----IDADTVT 270
A VL + P TY+ ++ G G + A+ +M+ G D V+
Sbjct: 217 RALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVS 276
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ ++ GL G++E+ K+ + M +GC P+ A+Y ++ + K +A + M+
Sbjct: 277 YTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGML 336
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P+ V+Y LI GLC+ ++ +L++M G P
Sbjct: 337 VKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEP 377
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 1/187 (0%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ G C+ G + +A V DE PK+ P V +++TL+ G C+ G VEE F L ME
Sbjct: 145 FNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVME 204
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
SE + D TF+ LI+GL K+G+++EG L + M GKG PN ++ ++ G +
Sbjct: 205 SERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVD 264
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-RMGMWREI 379
A + M+ + + P V+Y LI+GLC +++ ++ +M G P R+ I
Sbjct: 265 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLI 324
Query: 380 VGCVTFG 386
GC +G
Sbjct: 325 DGCCKYG 331
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 6/257 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE---IQGI 185
FF+NV+ G + A ++P P+V +FN +++ A E ++G+
Sbjct: 143 FFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGV 202
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
S V D + L+ GLC+ G L+ + DE + PN T++ L+ G C+
Sbjct: 203 MESER---VCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCK 259
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + M ++G+ D VT+N LI+GL K G ++E +L+ M G P+ +
Sbjct: 260 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRIT 319
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+ ++ G A E+ RM+ E + V++ LI GLC V D + +L+ M+
Sbjct: 320 FTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDML 379
Query: 366 QQGFVPRMGMWREIVGC 382
GF P + +V C
Sbjct: 380 SAGFKPDDPTYTMVVDC 396
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GV D N L+ GLC+ G+L+ A +++E P+ T++TL+ G C+ G++E A
Sbjct: 277 GVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESA 336
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ RM EGI+ D V F +LISGL + G+V + ++L M G P+ +Y V+
Sbjct: 337 LEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDC 396
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K +L+ M + P V+Y L++GLC Q V++ +L M+ G P
Sbjct: 397 FCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAP 455
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ FN++++ G + ++ K G+ N L+ G C+ G +E F +
Sbjct: 140 PNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRL 199
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ P+V T+S L++GLC++G ++E L + M +G+ + VTF +LI G K
Sbjct: 200 KGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCK 259
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
GKV+ +K + M +G P+ +Y ++ GL EA+ LV M + P ++
Sbjct: 260 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRIT 319
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ LI G C +E + ++MV++G
Sbjct: 320 FTTLIDGCCKYGDMESALEIKRRMVEEG 347
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 2/270 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ ++ +IN L + R D + + + L +G + V+ G++ A+
Sbjct: 210 PDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGL--VPNGVTFTVLIDGQCKGGKVDLAL 267
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M + P + T+N ++N L E + + + G+ D L+ G
Sbjct: 268 KNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGC 327
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G++E+A + ++ E + ++ L+ GLC G V +A +L M S G D
Sbjct: 328 CKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDD 387
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+ +++ K+G V G KLL+ M+ G P +Y ++ GL + + AK L+
Sbjct: 388 PTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDA 447
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
M+ ++P+ ++Y L+ G DVD
Sbjct: 448 MLNVGVAPNDITYNILLEGHSKHGSSVDVD 477
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 64/155 (41%), Gaps = 37/155 (23%)
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
AFY+ E PN ++ LMHG C+ G V A + + + G+ V+FN LIS
Sbjct: 128 AFYL--EVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLIS 185
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G K G VEEG + L G M ER+ P
Sbjct: 186 GCCKAGAVEEGFR-----------------------------------LKGVMESERVCP 210
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ LI+GLC + +++ + +M +G VP
Sbjct: 211 DVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVP 245
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 100/171 (58%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+NI+LKGLC NG + A ++ E +++ P++ +Y+TL++GLC+ ++EA GLL ME
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G ++VT L+ GL K G+++E M+LLE MK KG + Y ++ G +
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
KEL M+ + +S + V+Y L+HGLC ++ + VL M + G P
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHP 171
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 119/227 (52%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A+ + +M + P + ++N ++N L AK E G+ G ++
Sbjct: 12 GGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTC 71
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC++G ++ A +L+ K+ + +V Y TL+ G C GN++ L + M
Sbjct: 72 TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG 131
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI A+ VT++ L+ GL + G+ +E +L M G +P+ +Y ++ GL R
Sbjct: 132 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 191
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A +L+ M+ + PS V+Y L+ GLC + LV D +L+ M+++G
Sbjct: 192 AMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 101/206 (49%)
Query: 166 FNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP 225
N+VL L E G+ + V D N L+ GLC+ L+ A +L E
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
C PN T +TLM GLC+ G ++EA LLE M+ +G DAD V + LISG G ++
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
G +L + M GKG N +Y +++GL ++ EA ++ M + P V+Y LI
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVP 371
GLC +L MV++G P
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEP 206
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 107/216 (49%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A ++ +A+ L +M + C+P+ T +++ L E + + K G + D
Sbjct: 46 AKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVL 105
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G C NGNL+ + DE + NV TYS L+HGLC G +EA +L M
Sbjct: 106 YGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 165
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI D VT+ LI GL K G+ M LL M KG P++ +Y +L GL +
Sbjct: 166 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVI 225
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+A +++ MI + V+Y L+ GLC++ V++
Sbjct: 226 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDE 261
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 139/314 (44%), Gaps = 4/314 (1%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
D ++ ++ + K+ D Y ++ L + D + + + C + F
Sbjct: 226 DAFKILRMMIEKGKKADV----VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVF 281
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+N++ GR++KA++ M ++ T+N++L + A E ++
Sbjct: 282 TFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV 341
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
LG ++ +IL+ G C+ L A + E P + Y+TLM LC++G++
Sbjct: 342 LDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 401
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E+A L + M + + D ++FN +I G K G + +L +M G P++ ++ +
Sbjct: 402 EQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTL 461
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ L EAK + RM+ +P + Y L+ GL ++ ++ +L +M +G
Sbjct: 462 INRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGT 521
Query: 370 VPRMGMWREIVGCV 383
V + I+ C+
Sbjct: 522 VLDRKIVSTILTCL 535
>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 148/337 (43%), Gaps = 35/337 (10%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI------KVEKLCR-------------- 124
K P+ YT++IN L +A RFD+ +I + + EK CR
Sbjct: 143 KGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDL 202
Query: 125 --------------FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
FS + ++I + AG I KA + M C P + T+N++L
Sbjct: 203 AYELTVGAMRGRIKFSKSIYNSLINGFCQ-AGWIDKAQSIISFMRRNGCEPDLVTYNVLL 261
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
N L E + + + GVE D N LLKGLC+ L+ A+ ++ +
Sbjct: 262 NYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGL 321
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
+V +Y+T++ LC + + A+ L E M +GI D VTF ILI ++G KL
Sbjct: 322 CDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKL 381
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L++M G G P+ Y ++ L + A + M+ ++P VSY LI+GLC
Sbjct: 382 LDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCR 441
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
V + + + M G P ++ I+G + + K
Sbjct: 442 ASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEK 478
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 109/233 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG I +A++T +M NC +N + +LV + + Y G +++
Sbjct: 22 AGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFT 81
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ + GLC+ N +L++ + P++ Y+ ++ LC + ++ A G+++ M
Sbjct: 82 YSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMV 141
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G + D VT+ I+I+GL + G+ + +++ M KG P+ + + ++ GL +
Sbjct: 142 EKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVD 201
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
A EL + R+ S Y LI+G C ++ ++ M + G P +
Sbjct: 202 LAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDL 254
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 115/258 (44%), Gaps = 6/258 (2%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
S+IS + +R P+ Y +++N + E++M+ K+E+ D + YN
Sbjct: 240 SIIS----FMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMK--KMERSGVEPDVYSYN 293
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ A R+ KA + + V ++N ++ L +A ++
Sbjct: 294 ELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGK 353
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+ D IL+K G+ A +LD+ P+ Y+T++ LC+ G + A
Sbjct: 354 GITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMA 413
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ M GI D V++N LI+GL + +V E M L E M G P+ +++ ++ G
Sbjct: 414 HSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGG 473
Query: 313 LLDKKRFPEAKELVGRMI 330
L+ +K+ A + +M+
Sbjct: 474 LIWEKKLSVACRVWDQMM 491
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%)
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G ++ A DE K NC Y+ + L + + A +RM +G ++ T+
Sbjct: 23 GLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTY 82
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
+ ISGL K KLLE M G P+ +Y L L + + A +V M+
Sbjct: 83 SRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVE 142
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P V+Y +I+GLC + + + MV++GF P R +V
Sbjct: 143 KGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALV 191
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
IS K G +++ +K + M C S Y + L+ + RF A++ RMI +
Sbjct: 16 ISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGF 75
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
S + +Y + I GLC K ++ +L+ M + G+VP
Sbjct: 76 SLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVP 112
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 59/137 (43%)
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y + + G +++A + M ++ +N I L +Q + + + +RM
Sbjct: 11 AYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRM 70
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+G NS +Y + GL K F ++L+ M P +Y ++ LC + +
Sbjct: 71 IPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQL 130
Query: 355 EDVDWVLKKMVQQGFVP 371
+ V++ MV++G P
Sbjct: 131 DVALGVVQTMVEKGREP 147
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 166/380 (43%), Gaps = 50/380 (13%)
Query: 58 PTEVLKIFSNLR-DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
P +++ ++R P + + D+ +E ++ I++ L A +M+R
Sbjct: 85 PHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMER 144
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVS 175
+ ++ + V+ + +AG + + +FD M P VK N +L +L
Sbjct: 145 VVSFEM--------HGVVDVL--IAGHVXCLL--VFDKMIRNGLLPDVKNCNRILRVLRD 192
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
L + + +Y + G++ N +L C+ G ++ A +L E ++ C PN T
Sbjct: 193 ENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVT 252
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y+ L++GL +KG +E+A GL+E M + G++ T+N LI+G ++G E L+E M
Sbjct: 253 YNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMV 312
Query: 296 GKGCYPNSASYQEVLYGL----------------LDKKRFP------------------- 320
+ +P ++Y ++YGL L K P
Sbjct: 313 NRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCIS 372
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA L + C + P+ ++Y LIHGLC ++ + K+M QG P + + +V
Sbjct: 373 EAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILV 432
Query: 381 -GCVTFGKDNRNRVYVTETV 399
GC G + R + E +
Sbjct: 433 NGCFKLGYVSMARGFFNEML 452
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 137/306 (44%), Gaps = 3/306 (0%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ +L++ +R Y PN+ Y +++N L++ + + +++ + L + YN +
Sbjct: 235 LELLSEMQERGCY-PNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLN--VSAYTYNPL 291
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G +A + + +M + +P++ T+N ++ L ++ ++ K
Sbjct: 292 INGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKF 351
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D N LL G C G + AF + DE ++ P V TY+TL+HGLC G ++ A
Sbjct: 352 TPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALR 411
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L + M +G+ D T+ IL++G K G V M KG P+ +Y + G +
Sbjct: 412 LKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEM 471
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
A + M+ P ++Y +H LC Q E+ +L+ MV G +P
Sbjct: 472 KIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHV 531
Query: 375 MWREIV 380
+ I+
Sbjct: 532 TYTSII 537
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 13/252 (5%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
M G + A+ +M +P + T+ +++N +G + G++ D
Sbjct: 402 MWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRF 461
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N + G + + AF + +E P+V TY+ +H LC++GN EEA LLE M
Sbjct: 462 AYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENM 521
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S+G+ D VT+ +I+G K G + + ++ M KG P+ +Y +++ K+
Sbjct: 522 VSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQML 581
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-------- 371
A +M+ + + + ++Y +I+GLC + +++ +M ++G +P
Sbjct: 582 DLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTIL 641
Query: 372 -----RMGMWRE 378
MG W E
Sbjct: 642 INESCNMGYWEE 653
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 137/346 (39%), Gaps = 63/346 (18%)
Query: 88 NPNEALYTLIINKLAQ----AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
N + Y +IN Q + FD +E+++ R L + + Y + K R
Sbjct: 282 NVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTY-NTLMYGLCKWVQVTGVR 340
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC---- 199
+ + DM P + +FN + LYG + S A L + C
Sbjct: 341 LRFS-----DMLKSKFTPDIVSFN--------SLLYGYCRTGCISEAFLLFDELKCRDLV 387
Query: 200 ----CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE---- 251
N L+ GLC G L+AA + E Q P++ TY+ L++G + G V
Sbjct: 388 PTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGF 447
Query: 252 -------------------------------AFGLLERMESEGIDADTVTFNILISGLRK 280
AF + E M + G D +T+N+ + L +
Sbjct: 448 FNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQ 507
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
QG EE LLE M G P+ +Y ++ G + +A+E+ M+ + ++PS V+
Sbjct: 508 QGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVT 567
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVT 384
Y LIH +++++ KM+++ + + I+ C+T
Sbjct: 568 YTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMT 613
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 12/243 (4%)
Query: 127 DGFFYNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D F YN +I G M S A +M + P V T+N+ ++ L + E +
Sbjct: 459 DRFAYNT-RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDL 517
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ G+ D ++ G +NG+L A V +E + P+V TY+ L+H
Sbjct: 518 LENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAA 577
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
K ++ AF +M + + A+ +T+N +I+GL +++E K + M+ KG PN S
Sbjct: 578 KQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFS 637
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL----------CNQKLVE 355
Y ++ + + EA L M+ ++ P ++ + L C + L++
Sbjct: 638 YTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQ 697
Query: 356 DVD 358
+V+
Sbjct: 698 NVE 700
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 123/297 (41%), Gaps = 18/297 (6%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K +D P Y +I+ L DA + + + + L F D F Y ++ G
Sbjct: 382 KCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGL--FPDIFTYTILVNGCFKLG 439
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA--------KLGV 194
+S A +M S P +N ++ GE++ TS A G
Sbjct: 440 YVSMARGFFNEMLSKGLKPDRFAYN--------TRIVGEMKIADTSVAFSMQEEMLAAGF 491
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D N+ + LC+ GN E A +L+ P+ TY+++++G + G++ +A
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ M S+G+ VT+ +LI + ++ +M K N +Y ++ GL
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+R EA + M + + P+ SY LI+ CN E+ + ++M+ + P
Sbjct: 612 MTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQP 668
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 142/294 (48%), Gaps = 7/294 (2%)
Query: 80 QYSKRKD---YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
Q KR D PN +Y +II+ + +AK + D+ ++ +++ D F N + I
Sbjct: 196 QLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRIS--PDDFTCNSL-I 252
Query: 137 YG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
YG + G++ +A+ L M N P + TF+++++ E + + K +
Sbjct: 253 YGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDII 312
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+D N L+ G C + A + D + NV++Y+T+++GLC+ V+EA L
Sbjct: 313 LDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNL 372
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
E M I + VT+N LI GL K GK+ +KL++ M +G PN +Y +L L
Sbjct: 373 FEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCK 432
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+A L+ + + + P +Y LI GLC +ED V + ++ +G+
Sbjct: 433 NHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGY 486
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 117/223 (52%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
N P + FN +L+ LV AK + ++ G+ D NIL+ + G +
Sbjct: 65 NPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLS 124
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
F V + K+ +PN T++TL+ GLC KG++ +A +++ ++G D V++ LI+G
Sbjct: 125 FSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLING 184
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L K G++ ++LL+R+ GK PN+ Y ++ + K +A +L +M+ +R+SP
Sbjct: 185 LCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPD 244
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ LI+G C +++ +L KM+ + PRM + +V
Sbjct: 245 DFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILV 287
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 150/346 (43%), Gaps = 17/346 (4%)
Query: 43 SDHHAYKLNH--KDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINK 100
S H +LN D+ + ++ FS L SV + K K ++PN + +I
Sbjct: 91 SLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILK-KGFDPNAITFNTLIKG 149
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AGRISKAIETLFDM 154
L + ++ + GF + + YG + GRI+ A++ L +
Sbjct: 150 LCLKGHIHQALNFHDKV-------VAQGFHLDQVS-YGTLINGLCKVGRITAALQLLKRV 201
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
P+ +N++++ + AKL + +Y+ + D N L+ G C G L
Sbjct: 202 DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQL 261
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A +L + +N P + T+S L+ C++G V+EA +L + I D VT+N L
Sbjct: 262 KEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSL 321
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
+ G ++ + + + M +G N SY ++ GL K EA L M C ++
Sbjct: 322 MDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKI 381
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P+ V+Y LI GL + V ++ +M +G P + + I+
Sbjct: 382 IPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSIL 427
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 114/231 (49%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ I+KA + M S +V+++ ++N L K+ E ++ + +
Sbjct: 327 LVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVV 386
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ GL + G + ++DE + PN+ TY++++ LC+ +V++A LL +
Sbjct: 387 TYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNL 446
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ +GI D T+ +LI GL + GK+E+ K+ E + KG + +Y ++ G K F
Sbjct: 447 KDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLF 506
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
A L+ +M P+ +Y+ +I L + + + +L++M+ +G +
Sbjct: 507 DAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLL 557
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 140/343 (40%), Gaps = 37/343 (10%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
++IS N K+ P + I++ L +AK + Q++++ + SD F +N
Sbjct: 52 NLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIV--SDFFTFN 109
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
++ + G S + + P+ TFN ++ L + +
Sbjct: 110 ILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQ 169
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS--------------- 237
G +D L+ GLC+ G + AA +L + +PN Y+
Sbjct: 170 GFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDA 229
Query: 238 --------------------TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+L++G C G ++EA GLL +M E I+ TF+IL+
Sbjct: 230 FDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDA 289
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
K+GKV+E +L K + +Y ++ G K +AK++ M + +
Sbjct: 290 FCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIAN 349
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
SY +I+GLC K+V++ + ++M + +P + + ++
Sbjct: 350 VQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLI 392
>gi|297847954|ref|XP_002891858.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337700|gb|EFH68117.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 395
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 157/337 (46%), Gaps = 24/337 (7%)
Query: 14 SIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPIS 73
S I+ SSA+T+T + A++ P S + I + R+P
Sbjct: 15 STIRRFSSAATVTTAVSAAISPPQNS---------------------LTSIVNGERNPQR 53
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
++ + + + + N A+Y + +L AKR +E+I++ K + +GF +
Sbjct: 54 IVEKFKKACESERFRNNIAVYDRTVRRLVAAKRLHFVEEILEEQKKYRDMS-KEGFAARI 112
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS-AAKL 192
I +YG AG A + +MP NC SV +FN +L+ +K + ++ ++ KL
Sbjct: 113 ISLYGK-AGMFENAQKVFDEMPDRNCKRSVLSFNALLSAYGLSKKFDVVEQLFNELPGKL 171
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
++ D N L+K LCE +L A +LDEF + +P++ T++TL+ KG E
Sbjct: 172 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEFENKGLKPDIVTFNTLLLSSYLKGQFELG 231
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ ++ + + D T+N + GL + K +E + L E +K G P+ S+ ++ G
Sbjct: 232 EEIWAKLVEKNVPIDIRTYNARLLGLASEVKSKELVSLFEELKASGIKPDVFSFNAMIRG 291
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+++ + EA+ ++ P ++ L+ +C
Sbjct: 292 SINQGKMDEAESWYKEIVKHGYRPDKATFALLLPAMC 328
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 107/231 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGR + A++ M + P+ +N +L LV + + +Y G +
Sbjct: 150 AGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ GLC+ G A + DE + PNV+ Y+ L+ LC G ++EA LL M+
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMK 269
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G D VT+N +SGL K G+V E + L ++ G Y ++ GL +RF
Sbjct: 270 DKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFD 329
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E M+ +SP V Y +I G +ED L M ++GFVP
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVP 380
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 15/305 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +YT++++ L A + D ++ +K +K C D YN GR+++A
Sbjct: 240 PNVKIYTVLLSSLCNAGKIDEAVQLLGSMK-DKGC-LPDEVTYNAFLSGLCKVGRVNEAF 297
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L + +K ++ +++ L A+ + E G Y + + + D I+++G
Sbjct: 298 QRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGC 357
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
E G +E A LD K+ P+ Y+T++ LC+ G++E A L M + D+
Sbjct: 358 AEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDS 417
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T I+I GL K+G V+E M++ + M GC P +Y ++ G + R EA+ L +
Sbjct: 418 TTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHK 477
Query: 329 MICERMSPSFV-------------SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
M F+ S +KL+H +C V +L+ ++ G VP +
Sbjct: 478 MEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537
Query: 376 WREIV 380
+ ++
Sbjct: 538 YNTLI 542
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 138/303 (45%), Gaps = 21/303 (6%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ +I+ L QA+RFD + + + D Y ++ AGRI A+ L
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNIS--PDVVLYTIMIRGCAEAGRIEDALSFLDV 372
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILLKGLCE 210
M P +N VL +L +G+++ +T +++ + +D+ I++ GLC+
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCD---HGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME---------- 260
G ++ A + DE + C+P V TY+ L+ G +G +EEA L +ME
Sbjct: 430 RGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLR 489
Query: 261 -SEGID--ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+ G + D+ + L+ + + G+V + KLL + G P+ +Y ++ GL +
Sbjct: 490 LTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKAR 549
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
A L + + +SP ++Y LI GL D + + ++Q G P + ++
Sbjct: 550 NLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYN 609
Query: 378 EIV 380
++
Sbjct: 610 SMM 612
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 116/288 (40%), Gaps = 35/288 (12%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F YN I +G I A+ M + C P+ T+N++++ L + G+ ++
Sbjct: 172 AFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFD 231
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
G+ + +LL LC G ++ A +L + C P+ TY+ + GLC+ G
Sbjct: 232 EMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVG 291
Query: 248 NVEEA-----------------------------------FGLLERMESEGIDADTVTFN 272
V EA FG + M I D V +
Sbjct: 292 RVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYT 351
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
I+I G + G++E+ + L+ MK KG P++ Y VL L D A L M+
Sbjct: 352 IMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN 411
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + +I GLC + LV++ + +M + G P + + ++
Sbjct: 412 NLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 129/290 (44%), Gaps = 52/290 (17%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF-SDGFFYN-VIKI---YGN 139
++ +P+ LYT++I A+A R IED + + V K F D F YN V+K+ +G+
Sbjct: 341 RNISPDVVLYTIMIRGCAEAGR---IEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGD 397
Query: 140 MA-------------------------------GRISKAIETLFDMPSYNCWPSVKTFNL 168
+ G + +A++ +M + C P+V T+N
Sbjct: 398 LERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNA 457
Query: 169 VLNLLVSAKLYGEIQGIYTSAA---------KLGVEIDACC----LNILLKGLCENGNLE 215
+++ E + ++ +L + + C L L+ +C++G +
Sbjct: 458 LIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVL 517
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A+ +L P+V TY+TL++GLC+ N++ A L + ++ +GI D +T+ LI
Sbjct: 518 KAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLI 577
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
GL + + + M L + + G P+ + Y ++ L K+ +A L
Sbjct: 578 DGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL 627
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 64/157 (40%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
EA F L + + ++ L+ G +A RM+ +N +
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTI 178
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
+ L G + + L RM GC PN A+Y ++ GL + +A ++ M+ +
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P+ Y L+ LCN +++ +L M +G +P
Sbjct: 239 MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLP 275
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%)
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E F L + G+ A + F L++ G+ + ++ RM P + Y +
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTI 178
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L L+D A L RM+ +P+ +Y L+ GLC Q + D + +M+ +G
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238
Query: 370 VPRMGMW 376
+P + ++
Sbjct: 239 MPNVKIY 245
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 126/260 (48%), Gaps = 2/260 (0%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
A Y L+++ L R ++++ + + L D F YN++ G + KA+E
Sbjct: 180 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLA--PDVFTYNILINGHCKEGNVKKALEIF 237
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+M +V T+ ++ L E ++ A + G+ D N L+ +
Sbjct: 238 ENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 297
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
GN++ AF ++ E K+ P+ TY+TLM GLC G V+EA L++ M GI D VT+
Sbjct: 298 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTY 357
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N LISG +G V++ +++ M KG P +Y ++ GL + +A+ +V M+
Sbjct: 358 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 417
Query: 332 ERMSPSFVSYKKLIHGLCNQ 351
++P +Y LI GL +
Sbjct: 418 NGITPDDSTYISLIEGLTTE 437
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 140/297 (47%), Gaps = 2/297 (0%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ V ++ + + P +Y +I + D R+ VE+ + YN++
Sbjct: 128 VKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM-VERGVAMTVAT-YNLL 185
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
M GR ++A E + +M P V T+N+++N + I+ + ++ GV
Sbjct: 186 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 245
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
L+ L + G ++ + DE ++ P++ Y+ L++ GN++ AF
Sbjct: 246 RATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE 305
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
++ ME + I D VT+N L+ GL G+V+E KL++ M +G P+ +Y ++ G
Sbjct: 306 IMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYS 365
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K +A + M+ + +P+ ++Y LI GLC +D + ++K+MV+ G P
Sbjct: 366 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 422
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 154/332 (46%), Gaps = 19/332 (5%)
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
P + +L Q + PN Y +I R A DIM+ ++ E+ + +
Sbjct: 57 PARALELLRQMPR-----PNAVTYNTVIAGFCSRGRVQAALDIMREMR-ERGGIAPNQYT 110
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA- 189
Y + GR+ +A++ +M + VK ++ N L+ Y + QG +A
Sbjct: 111 YGTVISGWCKVGRVDEAVKVFDEMLTKG---EVKPEAVMYNALIGG--YCD-QGKLDTAL 164
Query: 190 ------AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ GV + N+L+ L +G A+ +++E + P+V TY+ L++G
Sbjct: 165 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 224
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C++GNV++A + E M G+ A VT+ LI L K+G+V+E KL + +G P+
Sbjct: 225 CKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDL 284
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
Y ++ A E++G M +R++P V+Y L+ GLC V++ ++ +
Sbjct: 285 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 344
Query: 364 MVQQGFVPRMGMWREIVGCVTFGKDNRNRVYV 395
M ++G P + + ++ + D ++ + +
Sbjct: 345 MTKRGIQPDLVTYNTLISGYSMKGDVKDALRI 376
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 10/220 (4%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S + S + + +L+ L SA + ++ +L + + NI+L+ LC G
Sbjct: 1 MKSLSLPISTASLHPLLSALPSAPAFA----LFADMFRLRLPLCTTTFNIMLRHLCSAGK 56
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFN 272
A +L + P+ PN TY+T++ G C +G V+ A ++ M E GI + T+
Sbjct: 57 PARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 112
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKG-CYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
+ISG K G+V+E +K+ + M KG P + Y ++ G D+ + A RM+
Sbjct: 113 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 172
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ + +Y L+H L + ++++M +G P
Sbjct: 173 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 212
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+H L AF L M + T TFNI++ L GK ++LL +M
Sbjct: 13 LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP---- 68
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICER--MSPSFVSYKKLIHGLCNQKLVEDV 357
PN+ +Y V+ G + R A +++ R + ER ++P+ +Y +I G C V++
Sbjct: 69 RPNAVTYNTVIAGFCSRGRVQAALDIM-REMRERGGIAPNQYTYGTVISGWCKVGRVDEA 127
Query: 358 DWVLKKMVQQGFV-PRMGMWREIVG 381
V +M+ +G V P M+ ++G
Sbjct: 128 VKVFDEMLTKGEVKPEAVMYNALIG 152
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 123/240 (51%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + K D+ SY P V++++++++ L A E I+ + + G +DA
Sbjct: 407 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 466
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ G C++G + A+ +L+E ++ +P V TY ++ GL + ++EA+ L E +
Sbjct: 467 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 526
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+GI+ + V ++ LI G K G+++E +LE M KG PN ++ +L L+ +
Sbjct: 527 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN 586
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA M + P+ +Y LI+GLC + + M +QG VP + + ++
Sbjct: 587 EALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMI 646
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 130/301 (43%), Gaps = 38/301 (12%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + P++ YT +I L +A R E++ +++ E+ + YN + + AG
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER--SVPCAYAYNTMIMGYGSAG 199
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R A + L + C PSV +FN +L L + E ++
Sbjct: 200 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF---------------- 243
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
E K++ EPN TY+ ++ LC G VEEA+ +L+ ME
Sbjct: 244 --------------------EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHA 283
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ + +T NI++ L K K+EE K+ E +GC P+ +Y ++ GL K + EA
Sbjct: 284 SLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEA 343
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L +M+ + + V Y LI ED V K+++++G P + + + C
Sbjct: 344 YRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDC 403
Query: 383 V 383
V
Sbjct: 404 V 404
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++I+ L +A + +I +K + D YN + +G++ KA
Sbjct: 427 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFAL--DARAYNAVVDGFCKSGKVHKAY 484
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M P+V T+ +++ L E ++ A G+E++ + L+ G
Sbjct: 485 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 544
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G ++ A+ +L+E K+ PNV T+++L+ L + + EA + M+ +T
Sbjct: 545 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNT 604
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T++ILI+GL + K + + M+ +G PN +Y ++ GL +A L R
Sbjct: 605 YTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 664
Query: 329 MICERMSPSFVSYKKLIHGLCN 350
P S+ LI G+ N
Sbjct: 665 FKANGGIPDAASFNALIEGMSN 686
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 135/295 (45%), Gaps = 8/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA- 147
PN +++++L +A++ + I + ++ C + ++I G G++ +A
Sbjct: 287 PNLLTVNIMVDRLCKARKLEEAYKIFESAS-QRGCNPDCVTYCSLIDGLGK-KGQVDEAY 344
Query: 148 --IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
E + D +N P V T +L+ N + + + ++ + G + D LN +
Sbjct: 345 RLFEKMLD-AGHNANPVVYT-SLIRNFFIHGR-KEDGHKVFKELIRRGCKPDLTLLNTYM 401
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
+ + G +E + ++ P+VR+YS L+HGL + G E + M+ +G
Sbjct: 402 DCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 461
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D +N ++ G K GKV + ++LE MK K P A+Y ++ GL R EA L
Sbjct: 462 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 521
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + V Y LI G +++ +L++M+++G P + W ++
Sbjct: 522 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 576
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K P A Y I++ LA+ R D + + K K + + ++I +G + G
Sbjct: 491 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK-SKGIELNVVLYSSLIDGFGKV-G 548
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI +A L +M P+V T+N +L+ LV A+ E + S ++ + +
Sbjct: 549 RIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYS 608
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ GLC AF + KQ PNV TY+T++ GL + GN+ +A+ L ER ++
Sbjct: 609 ILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKAN 668
Query: 263 GIDADTVTFNILISGLRKQGKVEEG 287
G D +FN LI G+ + E
Sbjct: 669 GGIPDAASFNALIEGMSNANRAMEA 693
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 20/293 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-FYNVIKIYGNMAGRISKA 147
PN+A L L +A+R D D + + V + +F F Y V+ A R +A
Sbjct: 9 PNQACADLAA-ALVRARRLD---DAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERA 64
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL--NILL 205
+E L M V F ++ L +G A L E+ CL +I+L
Sbjct: 65 LELLRQMQEVGYEVGVHLFTTLVRALAR-------EGQVADALALVDEVKGSCLEPDIVL 117
Query: 206 KGLC-----ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+C + GN++ A E Q +P+ +Y++++ LC+ G + EA L +ME
Sbjct: 118 YNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME 177
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+E +N +I G G+ E+ KLLER++ +GC P+ S+ +L L K++
Sbjct: 178 AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 237
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EA L ++ + P+ +Y +I LC VE+ +L +M P +
Sbjct: 238 EALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNL 289
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+L+ L E E A +L + + E V ++TL+ L +G V +A L++ ++
Sbjct: 49 TVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKG 108
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
++ D V +N+ I K G V+ K +K +G P+ SY +++ L R E
Sbjct: 109 SCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGE 168
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A+EL +M ER P +Y +I G + ED +L+++ ++G +P + + I+
Sbjct: 169 AEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILT 228
Query: 382 CV 383
C+
Sbjct: 229 CL 230
>gi|356523086|ref|XP_003530173.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g17670-like [Glycine max]
Length = 456
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
AGR+ A+E + + S +C P TFN LV +L S+ + I K V+ D
Sbjct: 163 AGRLDHAVELIKEFASKHCPPDTYTFNFLVKHLCKSSTITTVYAFIDEMREKFDVKPDLV 222
Query: 200 CLNILLKGLC--ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
IL+ +C +N NL A ++ ++ + + Y+T+M G C EA +
Sbjct: 223 TYTILIDNVCNGKNLNLREAMRLVSVLHEEGFKLDCFVYNTIMKGYCVLSRGSEAIEVYN 282
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+M+ EG++ D VT+N LI GL K G+V E KLL M KG +P+ +Y ++ GL K
Sbjct: 283 KMKEEGVEPDLVTYNTLIFGLSKSGRVTEARKLLRVMAEKGYFPDEVTYTSLMNGLCRKG 342
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
A L+G M + SP+ +Y L+HGLC +LVE
Sbjct: 343 DALGALALLGEMEAKGCSPNACTYNTLLHGLCKARLVE 380
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 2/221 (0%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFY 131
+V + +++ ++ D P+ YT++I+ + K + + + M+ + V F D F Y
Sbjct: 203 TVYAFIDEMREKFDVKPDLVTYTILIDNVCNGKNLN-LREAMRLVSVLHEEGFKLDCFVY 261
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N I + R S+AIE M P + T+N ++ L + E + + A+
Sbjct: 262 NTIMKGYCVLSRGSEAIEVYNKMKEEGVEPDLVTYNTLIFGLSKSGRVTEARKLLRVMAE 321
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G D L+ GLC G+ A +L E + C PN TY+TL+HGLC+ VE+
Sbjct: 322 KGYFPDEVTYTSLMNGLCRKGDALGALALLGEMEAKGCSPNACTYNTLLHGLCKARLVEK 381
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
A + + + G+ DT ++ + L + G++ E ++ +
Sbjct: 382 AVKFYQVIRAGGLKLDTASYGTFVRALCRDGRIAEAYEVFD 422
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 6/252 (2%)
Query: 124 RFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS-AKLYGEI 182
RF + ++ K+ + I +PS++ P TF+++L+ + + L I
Sbjct: 77 RFPNSLLHSYAKLATTPSDSIKFFNHITKTLPSFS--PDRSTFHILLSHASNNSNLLSPI 134
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
G+ D ++ ++ LC G L+ A ++ EF ++C P+ T++ L+
Sbjct: 135 HQXLNLMLAAGITPDTATADVAVRSLCSAGRLDHAVELIKEFASKHCPPDTYTFNFLVKH 194
Query: 243 LCEKGNVEEAFGLLERM-ESEGIDADTVTFNILISGL--RKQGKVEEGMKLLERMKGKGC 299
LC+ + + ++ M E + D VT+ ILI + K + E M+L+ + +G
Sbjct: 195 LCKSSTITTVYAFIDEMREKFDVKPDLVTYTILIDNVCNGKNLNLREAMRLVSVLHEEGF 254
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
+ Y ++ G R EA E+ +M E + P V+Y LI GL V +
Sbjct: 255 KLDCFVYNTIMKGYCVLSRGSEAIEVYNKMKEEGVEPDLVTYNTLIFGLSKSGRVTEARK 314
Query: 360 VLKKMVQQGFVP 371
+L+ M ++G+ P
Sbjct: 315 LLRVMAEKGYFP 326
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 13/171 (7%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
I V N+ K + P+ Y +I L+++ R ++ R+ EK G+F +
Sbjct: 277 AIEVYNKM-KEEGVEPDLVTYNTLIFGLSKSGRVTEARKLL-RVMAEK------GYFPDE 328
Query: 134 IKIYGNMAGRISK-----AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+ M G K A+ L +M + C P+ T+N +L+ L A+L + Y
Sbjct: 329 VTYTSLMNGLCRKGDALGALALLGEMEAKGCSPNACTYNTLLHGLCKARLVEKAVKFYQV 388
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
G+++D ++ LC +G + A+ V D + +V YSTL
Sbjct: 389 IRAGGLKLDTASYGTFVRALCRDGRIAEAYEVFDYAVESKSLTDVAAYSTL 439
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 67 NLRDPISVISVLNQYSKRKD---YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC 123
NLR+ + ++SVL++ + D YN T++ ++ +AIE + ++K E +
Sbjct: 238 NLREAMRLVSVLHEEGFKLDCFVYN------TIMKGYCVLSRGSEAIE-VYNKMKEEGV- 289
Query: 124 RFSDGFFYNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGE 181
D YN + I+G + +GR+++A + L M +P T+ ++N L G
Sbjct: 290 -EPDLVTYNTL-IFGLSKSGRVTEARKLLRVMAEKGYFPDEVTYTSLMNGLCRKGDALGA 347
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
+ + AK G +AC N LL GLC+ +E A + + +Y T +
Sbjct: 348 LALLGEMEAK-GCSPNACTYNTLLHGLCKARLVEKAVKFYQVIRAGGLKLDTASYGTFVR 406
Query: 242 GLCEKGNVEEAFGLLE-RMESEGIDADTVTFNILISGLRKQGKVEE 286
LC G + EA+ + + +ES+ + D ++ L S L+ K +E
Sbjct: 407 ALCRDGRIAEAYEVFDYAVESKSL-TDVAAYSTLESTLKWLRKAKE 451
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 147/351 (41%), Gaps = 48/351 (13%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
YT I++ LA+ K+ +M++I C + + ++ M GR+ +AI+ L
Sbjct: 37 YTTIVDWLAKNKKIQEAVALMEKITANG-CTPTIATYNALLNGLCKM-GRLEEAIDLLRK 94
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+ C P V T+ +++ L K E ++ A G+ +D C L++GL + G
Sbjct: 95 IVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGK 154
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI--------- 264
+ A V Q C P+V T ST++ GLC+ G + A + + ME+ G+
Sbjct: 155 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 214
Query: 265 --------------------------DADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
DT+T+NILI GL K G V + M G
Sbjct: 215 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAG 274
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C P+ +Y ++ G A + M R SP+ V+Y LI GLC ++ +
Sbjct: 275 CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKAS 334
Query: 359 WVLKKMVQQGFVPRMGMWREIV-----------GCVTFGKDNRNRVYVTET 398
+ M ++G P ++ +V GC+ F + R+ V ++T
Sbjct: 335 LYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQT 385
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 8/284 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISK 146
P+ YT +I+ L + KR + + + L D Y + I G + AG+I +
Sbjct: 101 TPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLAL--DTVCYTAL-IRGLLQAGKIPQ 157
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A M S C P V T + +++ L A G I+ S G+ + + L+
Sbjct: 158 ASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 217
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ ++ A +L + K C P+ TY+ L+ GLC+ G+V A + M G
Sbjct: 218 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKP 277
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T+NILISG K G + + + M C PN +Y ++ GL +++ +A L
Sbjct: 278 DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKA-SLY 336
Query: 327 GRMICERMSP--SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ + ER P SFV Y L+ GLC +E + +M + G
Sbjct: 337 YQHMKERGCPPDSFV-YSSLVDGLCKSGKLEGGCMLFDEMERSG 379
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
TF++++N LV A + + + G ID ++ L +N ++ A ++++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
C P + TY+ L++GLC+ G +EEA LL ++ G D VT+ LI GL K+ +
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
E KL + M +G ++ Y ++ GLL + P+A + M + P V+ +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
I GLC + + K M +G P ++ ++
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 216
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + +A + + C + T+ +++ L K E + G
Sbjct: 12 AGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIAT 71
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N LL GLC+ G LE A +L + C P+V TY++L+ GL +K EA+ L + M
Sbjct: 72 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMA 131
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S G+ DTV + LI GL + GK+ + + + M +GC P+ + ++ GL R
Sbjct: 132 SRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIG 191
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A + M ++P+ V Y LIHGLC + ++ +L +M + P
Sbjct: 192 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 242
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 35/239 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLCRFSD-----GF 129
PNE +Y+ +I+ L +A++ D +++ ++K ++ LC+ D F
Sbjct: 207 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAF 266
Query: 130 F--------------YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
F YN++ AG A DM S C P+V T+ +++ L
Sbjct: 267 FDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCK 326
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ + Y + G D+ + L+ GLC++G LE + DE + N +T
Sbjct: 327 RRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQT 385
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
+ L+ LC+ V+EA L + EG+ +N +IS L K GKV EG + + M
Sbjct: 386 RTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 443
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 146/295 (49%), Gaps = 12/295 (4%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
+YT +IN +A + D +++ +K E+ + D ++ + GRI +A+E
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMK-ERGVKM-DVLLHSTLIQGLCRKGRIDEALEQFK 58
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSA-------KLYGEIQGIYTSAAKLGVEIDACCLNILL 205
M C P+V T+N V+N L A +L+ +++ Y A G E D + ++
Sbjct: 59 SMGE-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYE--ASHGCEPDVISYSTVI 115
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC+ ++ A+ C PNV TYS+L+ GLC+ V+EA+ LL +++ E +
Sbjct: 116 DALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMV 175
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ +N +++G ++QGK E ++LL MK KG N + +L+ L +A +
Sbjct: 176 PRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQF 235
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
R++ P+ V+Y +HGLC V++ +L +MV+ P + + I+
Sbjct: 236 FERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSII 290
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 7/317 (2%)
Query: 78 LNQY-SKRKDYNPNEALYTLIINKLAQAKRFDA----IEDIMQRIKVEKLCRFSDGFFYN 132
L Q+ S ++ +PN Y ++N L +A R D +D+ +R + C D Y+
Sbjct: 54 LEQFKSMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCE-PDVISYS 112
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ A R+ KA E M + C P+V T++ +++ L E +
Sbjct: 113 TVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGE 172
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
+ A N ++ G G +L ++ N+ ++ ++H L + E+A
Sbjct: 173 DMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 232
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
ER+ G + VT+N+ + GL K GKV+E ++L M P+ +Y ++ G
Sbjct: 233 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDG 292
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
R +A ++ RM+ P V++ L+HG K + V + MV GF+P
Sbjct: 293 FCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG 352
Query: 373 MGMWREIVGCVTFGKDN 389
+ + ++ CV G D+
Sbjct: 353 LQTYNVLMDCVC-GADS 368
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 133/309 (43%), Gaps = 12/309 (3%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
+Y P+ Y+ +I+ L +A+R D + +R++ + G NV+
Sbjct: 97 RYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR-------AVGCAPNVVTYSSL 149
Query: 140 MAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+ G R+ +A L + + P +N V+N E + + G
Sbjct: 150 IDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGF 209
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
I+ N +L L +N E A + K +PNV TY+ +HGLC+ G V+EA+
Sbjct: 210 GINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYR 269
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+L M + D +T++ +I G K G++++ + RM C P+ ++ +L+G
Sbjct: 270 ILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFS 329
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ K+ EA + M+ P +Y L+ +C VE + KM ++ P
Sbjct: 330 EHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDAN 389
Query: 375 MWREIVGCV 383
+ ++ C+
Sbjct: 390 TYAPLIQCL 398
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 134/314 (42%), Gaps = 21/314 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y + ++ L +A + D I+ + K+ D Y+ I AGR+ KA
Sbjct: 246 PNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKV--TPDVITYSSIIDGFCKAGRMDKAD 303
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M + C P TF +L+ K E ++ G N+L+ +
Sbjct: 304 DVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCV 363
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C ++E+A + + ++ +P+ TY+ L+ LC V+EA L+ ME++ + +
Sbjct: 364 CGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNG 423
Query: 269 VTFNILISGLRKQGKVEEG-------------------MKLLERMKGKGCYPNSASYQEV 309
+ L+ L KQG+V+E ++++E+M KG P+ A+Y V
Sbjct: 424 AICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAV 483
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L L R A +M +P V+Y LI C+ + +D + + MV GF
Sbjct: 484 LRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGF 543
Query: 370 VPRMGMWREIVGCV 383
P+ R + C+
Sbjct: 544 TPQAQTMRTLSSCL 557
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 125/292 (42%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y+ +I+ L + R D ++ ++K E + +YN + G+ S+ +
Sbjct: 141 PNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDM--VPRAMYYNAVVNGFKRQGKPSECL 198
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M ++ FN +L+ L + + K G + + N+ + GL
Sbjct: 199 ELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGL 258
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G ++ A+ +L E + P+V TYS+++ G C+ G +++A + RM
Sbjct: 259 CKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHP 318
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VTF L+ G + K E ++ E M G P +Y ++ + A E+ +
Sbjct: 319 VTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHK 378
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M ++ P +Y LI LC + V++ L M VP + +V
Sbjct: 379 MKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALV 430
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 99/280 (35%), Gaps = 52/280 (18%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK-----------LCRFSD--------- 127
P+ Y+ II+ +A R D +D+ R+ V + L FS+
Sbjct: 280 TPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFR 339
Query: 128 --------GFF-----YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
GF YNV+ A + A+E M P T+ ++ L
Sbjct: 340 VHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLC 399
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF--------PK 226
A+ E + V + + L++ LC+ G ++ A VLD P
Sbjct: 400 RARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPD 459
Query: 227 QNCE-----------PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
+ E P+ TY ++ LC V+ A E+M S G VT+ +LI
Sbjct: 460 EAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLI 519
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
++ ++ E M G P + + + + L D
Sbjct: 520 GEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRD 559
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 105/266 (39%), Gaps = 27/266 (10%)
Query: 25 ITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEV--LKIFSNLRDPI----SVISVL 78
I TF S A+++ H+D ++ + L+ ++ L D + SV S L
Sbjct: 315 IPHPVTFMTLLHGFSEHKKSREAFRV-HEDMVNAGFIPGLQTYNVLMDCVCGADSVESAL 373
Query: 79 NQYSK--RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
Y K RK P+ Y +I L +A+R D ++ + ++ + + +G + +
Sbjct: 374 EIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNV--VPNGAICHALVE 431
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G + +A L + V+ + + + ++ I K GV
Sbjct: 432 VLCKQGEVDEACSVL---------------DNVVEICKAGEPDEAVEVIEQMVLK-GVRP 475
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D +L+ LC +++A ++ + C P + TY+ L+ C ++AF +
Sbjct: 476 DEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIF 535
Query: 257 ERMESEGIDADTVTFNILISGLRKQG 282
E M + G T L S LR G
Sbjct: 536 EAMVAAGFTPQAQTMRTLSSCLRDAG 561
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 38/308 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLCRFSDGFFYNVI 134
PN Y I+N + ++ D+++++ ++ LCR DG I
Sbjct: 168 PNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCR--DGCIDAAI 225
Query: 135 KIYGNM---------------------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
++ M AG+ + ++ L DM S P+V TFN+++++
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVF 285
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
V E +Y G+ + N L+ G C L A +LD + NC P++
Sbjct: 286 VKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDI 345
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
T+++L+ G C+ V+E L ++ G+ A+TVT++IL+ G + GK+E +L +
Sbjct: 346 VTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQE 405
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M G P+ +Y +L GL D + +A E+ + +M+ V Y +I G+C
Sbjct: 406 MVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGK 465
Query: 354 VEDVDWVL 361
VED W L
Sbjct: 466 VEDA-WNL 472
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 147/297 (49%), Gaps = 12/297 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV--IKIYGNMAGRISK 146
P+ ++ + +A K+F+ + D +++++ +G +N+ + I N R K
Sbjct: 63 PSLVDFSRFFSGVASTKQFNLVLDFCKKMEL-------NGIAHNIYTLNIMINCFCRCCK 115
Query: 147 ---AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
A L + P TFN ++N L E + + G + + N
Sbjct: 116 TCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNS 175
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G+C++G+ A +L + ++N + +V TYST++ LC G ++ A L + ME++G
Sbjct: 176 IVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 235
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I + VT+N L+ GL K GK +G++LL+ M + PN ++ ++ + + + EA
Sbjct: 236 IKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEAN 295
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL MI + +SP+ ++Y L+ G C Q + + + +L MV+ P + + ++
Sbjct: 296 ELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLI 352
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 127/253 (50%)
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
KV KL D +N + + ++S+A+ + M C P+V T+N ++N + +
Sbjct: 125 KVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSG 184
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
+ + V+ D + ++ LC +G ++AA + E + + ++ TY+
Sbjct: 185 DTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYN 244
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
+L+ GLC+ G + LL+ M S I + +TFN+LI K+GK++E +L + M K
Sbjct: 245 SLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITK 304
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G PN+ +Y ++ G + R EA ++ M+ SP V++ LI G C K V++
Sbjct: 305 GISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEG 364
Query: 358 DWVLKKMVQQGFV 370
+ +K+ ++G V
Sbjct: 365 MKLFRKISKRGLV 377
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 3/273 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ +L + RK PN + ++I+ + + ++ + + + + + YN +
Sbjct: 260 VQLLKDMTSRKII-PNVITFNVLIDVFVKEGKLQEANELYKEMITKGIS--PNTITYNSL 316
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
M R+S+A L M NC P + TF ++ K E ++ +K G+
Sbjct: 317 MDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGL 376
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ +IL++G C++G LE A + E P+V TY L+ GLC+ G +E+A
Sbjct: 377 VANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALE 436
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ E ++ ++ D V + I+I G+ K GKVE+ L + KG PN +Y ++ GL
Sbjct: 437 IFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 496
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
K EA L+ +M + P+ +Y LI
Sbjct: 497 KKGSLSEANILLRKMEEDGNEPNDCTYNTLIRA 529
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 115/227 (50%), Gaps = 2/227 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R + +P+ +T +I + KR D + ++I L ++ Y+++ +G+
Sbjct: 338 RNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGL--VANTVTYSILVQGFCQSGK 395
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A E +M S P V T+ ++L+ L + I+ K + +D I
Sbjct: 396 LEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTI 455
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++G+C+ G +E A+ + P + +PNV TY+ ++ GLC+KG++ EA LL +ME +G
Sbjct: 456 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 515
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+ + T+N LI + G + KL+E MK G +++S + V+
Sbjct: 516 NEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 562
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 129/285 (45%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ + +IN L + ++ R+ VE C+ + YN I +G S
Sbjct: 131 YEPDTTTFNTLINGLCLESKVSEAVVLVARM-VENGCQ-PNVVTYNSIVNGICKSGDTSL 188
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A++ L M N V T++ +++ L ++ G++ N L+
Sbjct: 189 ALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVG 248
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ G +L + + PNV T++ L+ ++G ++EA L + M ++GI
Sbjct: 249 GLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISP 308
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+T+T+N L+ G Q ++ E +L+ M C P+ ++ ++ G KR E +L
Sbjct: 309 NTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLF 368
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ + + V+Y L+ G C +E + + ++MV G +P
Sbjct: 369 RKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLP 413
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 119/264 (45%), Gaps = 2/264 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +PN Y +++ R +++ + V C F ++IK Y + R+
Sbjct: 304 KGISPNTITYNSLMDGYCMQNRLSEANNMLD-LMVRNNCSPDIVTFTSLIKGYCKVK-RV 361
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ ++ + + T+++++ + + ++ LGV D IL
Sbjct: 362 DEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGIL 421
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GLC+NG LE A + ++ K ++ Y+ ++ G+C+ G VE+A+ L + +G+
Sbjct: 422 LDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGV 481
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ +T+ ++ISGL K+G + E LL +M+ G PN +Y ++ L + +
Sbjct: 482 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAK 541
Query: 325 LVGRMICERMSPSFVSYKKLIHGL 348
L+ M S S K +I L
Sbjct: 542 LIEEMKSCGFSADASSIKMVIDML 565
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N+ T + +++ C A+ +L ++ G + DT TFN LI+GL + KV E + L+
Sbjct: 99 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLV 158
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
RM GC PN +Y ++ G+ A +L+ +M + +Y +I LC
Sbjct: 159 ARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRD 218
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
++ + K+M +G + + +VG
Sbjct: 219 GCIDAAISLFKEMETKGIKSSLVTYNSLVG 248
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ T ++K + ++ + + + SKR N Y++++ Q+ + + E++
Sbjct: 344 DIVTFTSLIKGYCKVKRVDEGMKLFRKISKRG-LVANTVTYSILVQGFCQSGKLEIAEEL 402
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
Q ++ L D Y ++ G++ KA+E D+ + + +++ +
Sbjct: 403 FQ--EMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGM 460
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ ++ S GV+ + +++ GLC+ G+L A +L + + EPN
Sbjct: 461 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPND 520
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
TY+TL+ G++ + L+E M+S G AD + ++I L
Sbjct: 521 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 3/289 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R PN Y +++ L R + ++ ++ + YN + AG
Sbjct: 3 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCA--PNAVTYNTLVAAFCRAGE 60
Query: 144 ISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A + M N P++ TFN ++N L A + ++ + G+ D N
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
LL G C+ G L + V E ++ P+V T+++L+H C+ GN+E+A L+ +M
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + VTF LI G K+G +++ + +E M+ G P+ Y ++ G R A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+EL+ M +R+ P V+Y +I G C ++ + +KM+++G +P
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 289
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 143/298 (47%), Gaps = 5/298 (1%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
V+S++ + K PN + ++N L +A R + + + E L D YN
Sbjct: 67 VVSLMREEGNAK---PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLA--PDVVSYNT 121
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ G + +++ +M P V TF +++ A + + + G
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ ++ L+ G C+ G L+ A ++E K +P+V Y+ L++G C+ G ++ A
Sbjct: 182 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 241
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L+ ME++ + D VT++ +ISG K G ++ +L ++M KG P++ +Y ++ GL
Sbjct: 242 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 301
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++KR +A EL M+ + P +Y LI G C + VE + +M+++G +P
Sbjct: 302 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 359
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 143/315 (45%), Gaps = 21/315 (6%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L + ++V S + Q + P+ +T +I+ +A + ++ +++ E+ R ++
Sbjct: 132 LHESLAVFSEMTQ----RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR-ERGLRMNE 186
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F +I + G + A+ + +M PSV +N ++N + +
Sbjct: 187 VTFTALIDGFCK-KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 245
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
V+ D + ++ G C+ GNL++AF + + K+ P+ TYS+L+ GLCE+
Sbjct: 246 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 305
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+ +A L E M G+ D T+ LI G K+G VE+ + L + M KG P+ +Y
Sbjct: 306 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 365
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK---------------KLIHGLCNQK 352
++ GL R EA L+ ++ E P + Y L+ G C +
Sbjct: 366 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 425
Query: 353 LVEDVDWVLKKMVQQ 367
L+++ D V + M+ +
Sbjct: 426 LMKEADKVYQSMLDR 440
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G+ + T+NIL+ L +G++EE + ++ M+G GC PN+ +Y ++
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 319 FPEAKELVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A+ +V M E P+ V++ +++GLC +E V +MV++G P
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP 114
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 132/337 (39%), Gaps = 54/337 (16%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +IN + R D ++++ ++ +++ D Y+ I G + A
Sbjct: 219 PSVVCYNALINGYCKLGRMDLARELIREMEAKRV--KPDVVTYSTIISGYCKVGNLDSAF 276
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M P T++ ++ L K + ++ + +LGV+ D L+ G
Sbjct: 277 QLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 336
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL------------------------- 243
C+ GN+E A + DE ++ P+V TYS L++GL
Sbjct: 337 CKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 396
Query: 244 -------------------------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
C KG ++EA + + M D ++ILI G
Sbjct: 397 IKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 456
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI-CERMSPS 337
+ G V + + ++M G PNS S ++ GL ++ EA + ++ C ++ +
Sbjct: 457 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADA 516
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
S K LI + V+ + VL M + G +P G
Sbjct: 517 EAS-KALIDLNRKEGNVDALIDVLCGMARDGLLPSSG 552
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 23/227 (10%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIE--DIMQRIKVEKLCRFSDGFFYNVI 134
LNQ +K P+ Y+ +I L + KR DA E + M ++ V+ D F Y +
Sbjct: 278 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ-----PDEFTYTTL 332
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI-----YTSA 189
G + KA+ +M P V T+++++N L + E + +
Sbjct: 333 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 392
Query: 190 AKLGVEIDA---CC-------LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
++ DA CC + LLKG C G ++ A V +N + + YS L
Sbjct: 393 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 452
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+HG C GNV +A ++M G ++ + L+ GL ++G V E
Sbjct: 453 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 499
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 132/284 (46%), Gaps = 2/284 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN ++IN Q +R D ++ + ++ + + F +I G + G+ ++A
Sbjct: 7 SPNTCTLNILINCFCQLQRVDLGFSVLAK-GIKLGLQPTIVTFTTLINGLGKV-GKFAQA 64
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E DM + C P T+ ++N L G++ + G +++ + L+
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ + A + ++ P + TY++L+ GLC +EA LL M S I +
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VTFN+L+ K+GKV +L+ M G P+ +Y ++YG EA++L
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
MI + P SY LI+G C K +++ + +M+ QG P
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTP 288
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 2/285 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P +T +IN L + +F ++ + V + C+ D + +I + G + A
Sbjct: 43 PTIVTFTTLINGLGKVGKFAQAVELFDDM-VARGCQPDDYTYTTIINGLCKI-GETALAA 100
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M C +V T++ +++ L + E I++ + L++GL
Sbjct: 101 GLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGL 160
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C + A +L+E N PNV T++ L+ C++G V A G+L+ M G++ D
Sbjct: 161 CNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDV 220
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N L+ G +V E KL + M KGC P+ SY ++ G KR EAK+L
Sbjct: 221 VTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNE 280
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
MI + +P+ VSY LIHGLC + + + K M G +P +
Sbjct: 281 MIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNL 325
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 135/293 (46%), Gaps = 6/293 (2%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG--NMAGRISKA 147
N Y+ +I+ L + +R + DI +K + + S F I G N + R +A
Sbjct: 114 NVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDI---SPTIFTYTSLIQGLCNFS-RWKEA 169
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L +M S N P+V TFN++++ +G+ + ++GVE D N L+ G
Sbjct: 170 SALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYG 229
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ A + D + C+P+V +YS L++G C+ ++EA L M +G +
Sbjct: 230 YSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPN 289
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V++N LI GL + G++ E L + M G PN +Y +L G + +A L
Sbjct: 290 NVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFR 349
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + P+ V Y L++ +C ++D + ++ G P + ++ I+
Sbjct: 350 AMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTII 402
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 136/292 (46%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P++ YT IIN L + + ++++ E C+ + + +I R+++A+
Sbjct: 78 PDDYTYTTIINGLCKIGETALAAGLFKKME-EAGCQLNVVTYSTLIHSLCKYR-RVNEAL 135
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M + + P++ T+ ++ L + + E + L + + N+L+
Sbjct: 136 DIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTF 195
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G + AA VL + EP+V TY++LM+G V EA L + M ++G D
Sbjct: 196 CKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDV 255
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+++ILI+G K +++E +L M +G PN+ SY +++GL R EA++L
Sbjct: 256 FSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKN 315
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M P+ +Y L+ G C Q + + + M P + M+ +V
Sbjct: 316 MHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILV 367
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 2/198 (1%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+ + C LNIL+ C+ ++ F VL + K +P + T++TL++GL + G +A
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L + M + G D T+ +I+GL K G+ L ++M+ GC N +Y +++
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L +R EA ++ M + +SP+ +Y LI GLCN ++ +L +M +P
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184
Query: 373 MGMWREIVGCVTFGKDNR 390
+ + +V TF K+ +
Sbjct: 185 VVTFNVLVD--TFCKEGK 200
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 8/294 (2%)
Query: 81 YSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
Y K KD +P YT +I L R+ ++ ++ L + +NV+
Sbjct: 140 YMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLN--EMTSLNIMPNVVTFNVLVDTFCK 197
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEID 197
G++ A L M P V T+N +L+ ++ E+ + ++ G + D
Sbjct: 198 EGKVLAAEGVLKTMTEMGVEPDVVTYN---SLMYGYSMWTEVVEARKLFDVMITKGCKPD 254
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+IL+ G C+ ++ A + +E Q PN +Y+TL+HGLC+ G + EA L +
Sbjct: 255 VFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFK 314
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M + G + T+ IL+ G KQG + + +L M+ PN Y ++ +
Sbjct: 315 NMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSG 374
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A+EL + + P+ Y +I+GLC + L+++ + M G P
Sbjct: 375 NLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPP 428
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 128/290 (44%), Gaps = 10/290 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDI---MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PN + ++++ + + A E + M + VE D YN + +M +
Sbjct: 183 PNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVE-----PDVVTYNSLMYGYSMWTEVV 237
Query: 146 KAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A LFD M + C P V ++++++N AK E + ++ G + N L
Sbjct: 238 EA-RKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTL 296
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+ G L A + PN+ TY+ L+ G C++G + +AF L M+S +
Sbjct: 297 IHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYL 356
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ V +NIL++ + K G +++ +L + G PN Y ++ GL + EA E
Sbjct: 357 KPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALE 416
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
M + P SY +I G K ++ +M +GF+ G
Sbjct: 417 AFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAG 466
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
ME G+ +T T NILI+ + +V+ G +L + G P ++ ++ GL +
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
F +A EL M+ P +Y +I+GLC + KKM + G
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAG 110
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/271 (18%), Positives = 100/271 (36%), Gaps = 27/271 (9%)
Query: 21 SASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNL------RDPISV 74
+A + + T P +S + Y + W E K+F + D S
Sbjct: 203 AAEGVLKTMTEMGVEPDVVTYNSLMYGYSM----WTEVVEARKLFDVMITKGCKPDVFSY 258
Query: 75 ISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
++N Y K K + PN Y +I+ L Q R +D+ + +
Sbjct: 259 SILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHT 318
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
+ + Y ++ G + KA M S P++ +N+++N + +
Sbjct: 319 NG--NLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNL 376
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ + +++ +G++ + ++ GLC+ G L+ A C P+ +Y+ +
Sbjct: 377 KDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVI 436
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
+ G + + A L+ M G D T
Sbjct: 437 IRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 128/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ +E A + DE PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L + M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 9/240 (3%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVK---------TFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+G I+ +E+ F + C+ K T V+ L+ K + + G Y + +
Sbjct: 70 SGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESLE 129
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G NIL+ + G + A V D K P+V +++TLM+G + G+++E
Sbjct: 130 YGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDE 189
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
F L M++ G+ D T+++LI+GL K+ K+E+ +L + M G PN ++ ++
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLID 249
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G R A E+ +M+ + +SP ++Y LI+GLC + ++ + +M +G P
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKP 309
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 111/214 (51%), Gaps = 6/214 (2%)
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
Y S+ FN++++ V GEI Q ++ + K G+ N L+ G + G+
Sbjct: 130 YGYPASLYFFNILMHSFVKE---GEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD 186
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ F + + +P+V TYS L++GLC++ +E+A L + M + G+ + VTF
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTT 246
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K G+V+ M++ ++M + P+ +Y ++YGL K +A++L M +
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKG 306
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ P ++Y LI G C + +E K+M+++
Sbjct: 307 LKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKE 340
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQS-VFDAITKWGLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L + M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G+VP
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A + DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + + ++ + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLV--PNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ GLC++G +A +L M S G+ +
Sbjct: 321 SCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
T+ ++I+ K+G V G KLL+ M+ G P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 142/291 (48%), Gaps = 8/291 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P A+Y +IN Q + I +++K + D YN + I++A
Sbjct: 368 PTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHI--RPDHITYNALINGLCKMEMITEAE 425
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILL 205
+ + +M PSV+TFN +++ A G+++ +T + + G++ + ++
Sbjct: 426 DLVMEMEKSGVDPSVETFNTLIDAYGRA---GQLEKCFTVLSDMQDKGIKSNVISFGSVV 482
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
K C+NG + A +LD+ ++ PN + Y++++ E G E+AF L+E+M+S G+
Sbjct: 483 KAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVS 542
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
A T+N+L+ GL K +++E +L+ + +G P+ SY ++ +K A EL
Sbjct: 543 ASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALEL 602
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ M + P+ +Y L+ L + V D++ + + MV + P ++
Sbjct: 603 LQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY 653
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 143/346 (41%), Gaps = 54/346 (15%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++++ L +A R D +M + + DGF Y+++ G S+ +
Sbjct: 263 PNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSM--LPDGFTYSIL-FDGLTRTGDSRTM 319
Query: 149 ETLFD--------MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+LF + +Y C +++LN L + + + G+
Sbjct: 320 LSLFGESLKKGVIIGAYTC-------SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C+ +L+ AF + ++ ++ P+ TY+ L++GLC+ + EA L+ ME
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+D TFN LI + G++E+ +L M+ KG N S+ V+ + P
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492
Query: 321 EAKELVGRMI------------------------------CERM-----SPSFVSYKKLI 345
EA ++ MI E+M S S +Y L+
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLL 552
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNR 390
GLC +++ + ++ + QG P + + I+ C G +R
Sbjct: 553 KGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDR 598
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 133/295 (45%), Gaps = 6/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + + A D +++R+ + D F YNV+ +G+ S A+
Sbjct: 156 PDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDAL 215
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILL 205
+ +M P+ T+N +++ V G+++ + ++ G + + N+LL
Sbjct: 216 KVFDEMVDRGVAPNQITYNTMIDGHVKG---GDLEAGFRLRDQMLQDGRKPNVVTYNVLL 272
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC G ++ ++DE + P+ TYS L GL G+ L +G+
Sbjct: 273 SGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVI 332
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
T +IL++GL K GKV + ++LE + G P +A Y ++ G + A +
Sbjct: 333 IGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSI 392
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+M + P ++Y LI+GLC +++ + + ++ +M + G P + + ++
Sbjct: 393 FEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLI 447
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S + P T+N ++N L ++ E + + K GV+ N L+ G
Sbjct: 396 MKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQ 455
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
LE F VL + + + NV ++ +++ C+ G + EA +L+ M + + + +N
Sbjct: 456 LEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNS 515
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I + G E+ L+E+MK G + +Y +L GL + EA+EL+ + +
Sbjct: 516 IIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQG 575
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P VSY +I CN+ + +L++M + P + + ++
Sbjct: 576 LRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLL 622
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 37/257 (14%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ + NL+L L+S + +++ + G D N ++ G+L+ A +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180
Query: 221 LDEFPKQNCE--PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
L + P+ +Y+ ++ GL G +A + + M G+ + +T+N +I G
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G +E G +L ++M G PN +Y +L GL R E + L+ M M P
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300
Query: 339 VSY------------------------KK-----------LIHGLCNQKLVEDVDWVLKK 363
+Y KK L++GLC V + VL+
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360
Query: 364 MVQQGFVPRMGMWREIV 380
+V G VP ++ ++
Sbjct: 361 LVHTGLVPTTAIYNTLI 377
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 133/275 (48%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS 156
+I + K D+ D+ + I K + SD + ++ + I +G + A++
Sbjct: 35 LIQVVVSRKGKDSASDVFEAILETKGTQISDFYVFSGLMIAYLESGFVRDAVQCFRLTKQ 94
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
+ T VL L+ + + + Y + G NIL++ C+ G +
Sbjct: 95 HKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRL 154
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A V D K P+V +++TL++G + G+++E F L M + G D T++ILI+
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILIN 214
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
GL K+GK++E +L M G PN ++ +++G ++ A E+ +M+ + +SP
Sbjct: 215 GLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSP 274
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++Y LI+GLC + ++ V ++ +M+ G P
Sbjct: 275 DLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKP 309
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G + A +++FD + + PSV +FN ++N + E + +
Sbjct: 137 YFFNILMQRFCKEGEMRLA-QSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKS 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ G + D +IL+ GLC+ G L+ A + +E PN T++TL+HG C+
Sbjct: 196 AMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNE 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+G+ D +T+N LI GL K+G++++ L++ M G P+ SY
Sbjct: 256 KVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A EL +MI E + V+Y LI LC + D + +L++M+
Sbjct: 316 TLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P G + I+
Sbjct: 376 GLKPDNGTYTMII 388
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S+ FN+++ Q ++ + K G+ N L+ G + G+L+ F +
Sbjct: 135 SLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLK 194
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
+P+V TYS L++GLC++G ++EA L M G+ + VTF LI G K
Sbjct: 195 SAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKN 254
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
KV+ M++ ++M +G P+ +Y ++YGL K + +L+ MI + P +SY
Sbjct: 255 EKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISY 314
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
LI G C + +E + KM+Q+ + ++ C+
Sbjct: 315 TTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCL 356
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 129/272 (47%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQSV-FDAITKWGLRPSVVSFNTLINGY----IKL-----GDLDEGFRLKSAMHASGA 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L E ++ G+ + L+ G C+N ++ A
Sbjct: 203 QPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q P++ TY+TL++GLC+KG +++ L++ M G+ D +++ LI G
Sbjct: 263 IYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E ++L +M + + +Y ++ L + R +A++++ M+ + P
Sbjct: 323 KEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C ++ + +L++M + G VP
Sbjct: 383 TYTMIINEFCKKRDSKTASKLLREMQRDGPVP 414
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A E +M P+ TF +++ + IY G+ D
Sbjct: 220 GKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITY 279
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC+ G L+ ++DE +P+ +Y+TL+ G C++G++E A L +M
Sbjct: 280 NTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQ 339
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
E I D V + LIS L ++G+ + K+L M G P++ +Y ++ K+
Sbjct: 340 ESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKT 399
Query: 322 AKELVGRMICERMSPSFVS 340
A +L+ M + P V+
Sbjct: 400 ASKLLREMQRDGPVPGVVT 418
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 134/268 (50%), Gaps = 6/268 (2%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN-MAGRISKAIET 150
A Y L+++ L R ++++ + + L D F YN++ I G+ G + KA+E
Sbjct: 293 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAL--DVFTYNIL-INGHCKEGNVKKALEI 349
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
+M +V T+ ++ L E ++ A + G+ D N L+
Sbjct: 350 FENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 409
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
+GN++ AF ++ E K+ P+ TY+TLM GLC G V+EA L++ M GI D VT
Sbjct: 410 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVT 469
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+N LISG +G V++ +++ M KG P +Y ++ GL + +A+ +V M+
Sbjct: 470 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 529
Query: 331 CERMSPSFVSYKKLIHGLC--NQKLVED 356
++P +Y LI GL +++ ++D
Sbjct: 530 ENGITPDDSTYISLIEGLTTEDERAIDD 557
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 148/330 (44%), Gaps = 2/330 (0%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ + ++ + +R PN+ Y +I+ + R D + + + + +
Sbjct: 203 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 262
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+I Y + G++ A+ M +V T+NL+++ L E +
Sbjct: 263 LIGGYCDQ-GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 321
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+ +D NIL+ G C+ GN++ A + + ++ V TY++L++ L +KG V+E
Sbjct: 322 GLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 381
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L + GI D V +N LI+ G ++ +++ M+ K P+ +Y ++ G
Sbjct: 382 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 441
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L R EA++L+ M + P V+Y LI G + V+D + +M+ +GF P
Sbjct: 442 LCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 501
Query: 373 MGMWREIV-GCVTFGKDNRNRVYVTETVDS 401
+ + ++ G G+ + V E V++
Sbjct: 502 LLTYNALIQGLCKNGQGDDAENMVKEMVEN 531
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 10/197 (5%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S + S + + +L+ L SA + ++ +L + + NI+L+ LC G
Sbjct: 114 MKSLSLPISTASLHPLLSALPSAPAFA----LFADMFRLRLPLCTTTFNIMLRHLCSAGK 169
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFN 272
A +L + P+ PN TY+T++ G C +G V+ A ++ M E GI + T+
Sbjct: 170 PARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 225
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKG-CYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
+ISG K G+V+E +K+ + M KG P + Y ++ G D+ + A RM+
Sbjct: 226 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 285
Query: 332 ERMSPSFVSYKKLIHGL 348
++ + +Y L+H L
Sbjct: 286 RGVAMTVATYNLLVHAL 302
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 138/290 (47%), Gaps = 6/290 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA--GRISKAIETL 151
Y+++I+ L + D + ++++ + +D Y+ I G + GR + L
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNEMEMKGI--KADVVAYS--SIIGGLCNDGRWDDGAKML 302
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+M N P+V TF+ ++++ V E + +Y G+ D + L+ G C+
Sbjct: 303 REMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKE 362
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
L A +LD + CEPN+ TYS L++ C+ V+ L + S+G+ ADTVT+
Sbjct: 363 NRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTY 422
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N L+ G + GK+ +L + M +G P+ +Y +L GL D +A E+ +M
Sbjct: 423 NTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQK 482
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
RM Y +IHG+CN V+D + + +G P + + ++G
Sbjct: 483 SRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIG 532
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ GR+S+A+ + M P+V T N ++N L E + K G E +
Sbjct: 151 LEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEI 210
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+L +C++GN A + + +++ + +V YS ++ LC+ GN+++A L M
Sbjct: 211 TYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM 270
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E +GI AD V ++ +I GL G+ ++G K+L M G+ PN ++ ++ + + +
Sbjct: 271 EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKL 330
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EAKEL M+ ++P ++Y LI G C + + + + +L MV +G P + + +
Sbjct: 331 LEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSIL 390
Query: 380 VG--CVTFGKDNRNRVY 394
+ C DN R++
Sbjct: 391 INSYCKAKRVDNGMRLF 407
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 112/239 (46%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++++AI+ M PS+ F+ + + + K Y + G G+E + +N
Sbjct: 49 KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ C L AF V+ K EPN T+STL++G C +G V EA L++RM
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ VT N LI+GL +G+V E + L++RM GC N +Y VL + A
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+L +M + S V Y +I LC ++D + +M +G + + I+G
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIG 287
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 119/246 (48%), Gaps = 2/246 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ +A + L M S C P++ T+++++N AK ++ + G+ D N
Sbjct: 364 RLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYN 423
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L++G C++G L A + E + P+V TY L+ GLC+ G +++A + E+M+
Sbjct: 424 TLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKS 483
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ +NI+I G+ KV++ L + KG P+ +Y ++ GL K EA
Sbjct: 484 RMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEA 543
Query: 323 KELVGRMICERMSPSFVSYKKLIHG-LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
L +M + +PS +Y LI L ++ V+ + ++M +GF + +V
Sbjct: 544 DMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELI-EEMKMRGFAADASTIKMVVV 602
Query: 382 CVTFGK 387
++ G+
Sbjct: 603 MLSDGR 608
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 37/245 (15%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN Y+++IN +AKR D + I + L +D YN + +G++
Sbjct: 378 KGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGL--VADTVTYNTLVQGFCQSGKL 435
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ A E +M S PSV T+ IL
Sbjct: 436 NVAKELFQEMVSRGVPPSVVTYG-----------------------------------IL 460
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GLC+NG L+ A + ++ K + Y+ ++HG+C V++A+ L + +G+
Sbjct: 461 LDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGV 520
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+N++I GL K+G + E L +MK GC P+ +Y ++ L + E
Sbjct: 521 KPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVE 580
Query: 325 LVGRM 329
L+ M
Sbjct: 581 LIEEM 585
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 127/285 (44%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN +IN L R ++ R+ V+ C ++ + V+ +G +
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRM-VKYGCEANEITYGPVLNRMCK-SGNTAL 227
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A++ M + SV +++V++ L + ++ G++ D + ++
Sbjct: 228 ALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIG 287
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC +G + +L E +N PNV T+S L+ ++G + EA L M + GI
Sbjct: 288 GLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAP 347
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
DT+T++ LI G K+ ++ E ++L+ M KGC PN +Y ++ KR L
Sbjct: 348 DTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLF 407
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + + V+Y L+ G C + + ++MV +G P
Sbjct: 408 CEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPP 452
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T N+++N + + A K G E + + L+ G C G + A ++D
Sbjct: 106 TMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRM 165
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ PNV T +TL++GLC KG V EA L++RM G +A+ +T+ +++ + K G
Sbjct: 166 VEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNT 225
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ L +M+ + + Y V+ L +A L M + + V+Y +
Sbjct: 226 ALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSI 285
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
I GLCN +D +L++M+ + +P + + ++
Sbjct: 286 IGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALI 321
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 139/294 (47%), Gaps = 11/294 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS---DGFFYNVIKIYGN 139
K++ P A Y +++ A+ D+ VE + F D + YNV+
Sbjct: 271 KKEGIVPTRATYNTLVSAYARLGWIKQATDV-----VEAMTAFGFEPDLWTYNVLAAGLC 325
Query: 140 MAGRISKAIETLFDMPSYN-CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
AG++ +A + +M P V T+N +++ + + + + GV+
Sbjct: 326 QAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSL 385
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
NI++KGLC G LE A L+ ++ P+V TY+TL+ C+ GNV +AF L++
Sbjct: 386 VTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDE 445
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G+ DT T N L+ L K+ + EE +LL +G P+ SY V+ + +
Sbjct: 446 MVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYK 505
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQQGFVP 371
A L MI +++PS +Y LI GL KL E +D L ++++ G VP
Sbjct: 506 PEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDK-LNELMEMGLVP 558
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 137/310 (44%), Gaps = 1/310 (0%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
L ++ LR P +L+ + +R P+ +++ LA++ + +
Sbjct: 142 ALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLI 201
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
L + + +N++ G ++ A+ TL M + P T+N +LN + G
Sbjct: 202 ALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLG 261
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E + + K G+ N L+ G ++ A V++ EP++ TY+ L
Sbjct: 262 EARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLA 321
Query: 241 HGLCEKGNVEEAFGLLERMESEGI-DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
GLC+ G V+EAF L + ME GI D VT+N L+ K + + + LLE M+ KG
Sbjct: 322 AGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGV 381
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
+ ++ ++ GL + + EA + M E ++P ++Y LI C V
Sbjct: 382 KSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFV 441
Query: 360 VLKKMVQQGF 369
++ +MV+ G
Sbjct: 442 LMDEMVRSGL 451
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ TFNL+++ S + + G+ DA N LL C G L A +
Sbjct: 207 PNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTL 266
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L K+ P TY+TL+ G +++A ++E M + G + D T+N+L +GL +
Sbjct: 267 LARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQ 326
Query: 281 QGKVEEGMKLLERMKGKGCY-PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
GKV+E KL + M+ G P+ +Y ++ +R +A L+ M + + S V
Sbjct: 327 AGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLV 386
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ ++ GLC + +E+ L+ M ++G P + + ++
Sbjct: 387 THNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLI 427
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 131/302 (43%), Gaps = 13/302 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+ P+ Y ++ L QA + D ++D M+++ + D YN + R
Sbjct: 310 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVS----PDVVTYNTLVDACFKCQR 365
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
S A+ L +M S+ T N+++ L E G + G+ D N
Sbjct: 366 SSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNT 425
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C+ GN+ AF ++DE + + + T +TL++ LC++ EEA LL G
Sbjct: 426 LIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRG 485
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D V++ +++ K+ K E + L + M + P+ ++Y ++ GL + EA
Sbjct: 486 FVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAI 545
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ + ++ + P +Y +IH C + +E KMV+ F P ++V C
Sbjct: 546 DKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKP------DVVTCN 599
Query: 384 TF 385
T
Sbjct: 600 TL 601
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 23/251 (9%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN + + G++++AI+ L ++ P T+N++++ G+++ +
Sbjct: 528 YNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKE---GDLEKAFQFHN 584
Query: 191 KL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
K+ + D N L+ GLC G LE A + + + ++ + +V TY+TL+ LC+
Sbjct: 585 KMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDN 644
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK------GKGCYP 301
+V+ A ME G+ D T+N+L+S L + G+ E K+L ++ G+ YP
Sbjct: 645 DVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYP 704
Query: 302 NSASYQEVLYGLLDKKRFPEAK---ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
+ S E ++ + PE K E VG + SY K I LC +++
Sbjct: 705 SIKSSVEA----VETGKDPEVKSDIESVGNTQGDDQE----SYNKYIKELCIGGQLKEAK 756
Query: 359 WVLKKMVQQGF 369
VL +M+Q+G
Sbjct: 757 AVLDEMMQKGM 767
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 88/169 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ T+N ++ L + E ++G+ D NI++ C+ G+LE AF
Sbjct: 523 PSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQF 582
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
++ + + +P+V T +TLM+GLC G +E+A L E +G D +T+N LI L K
Sbjct: 583 HNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCK 642
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
V+ ++ M+ +G P+ +Y +L L + R EA++++ ++
Sbjct: 643 DNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKL 691
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 100/227 (44%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A+ L M P V T+N +++ A + + + G+++D L
Sbjct: 399 GQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTL 458
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL LC+ E A +L P++ P+ +Y T+M ++ E A L + M
Sbjct: 459 NTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIK 518
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ T+N LI GL GK+ E + L + G P+ +Y +++ + +
Sbjct: 519 RKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEK 578
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A + +M+ P V+ L++GLC +E + + V++G
Sbjct: 579 AFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKG 625
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 6/261 (2%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN + AG ++KA + +M T N +L L K Y E + +
Sbjct: 419 DVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELL 478
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ + G D ++ + E A + DE K+ P++ TY+TL+ GL
Sbjct: 479 RAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTM 538
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G + EA L + G+ D T+NI+I K+G +E+ + +M P+ +
Sbjct: 539 GKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTC 598
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK---K 363
++ GL R +A +L + + ++Y LI LC DVD L+
Sbjct: 599 NTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDN---DVDTALRFFAD 655
Query: 364 MVQQGFVPRMGMWREIVGCVT 384
M +G P + + ++ ++
Sbjct: 656 MEVRGLQPDVFTYNVLLSALS 676
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 9/193 (4%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+KGL G L A L+E + P+ TY+ ++H C++G++E+AF +M
Sbjct: 529 NTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVE 588
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
D VT N L++GL G++E+ MKL E KG + +Y ++ L
Sbjct: 589 NSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDT 648
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG------FVPRMGM 375
A M + P +Y L+ L + +L K+ + G F P +
Sbjct: 649 ALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSI-- 706
Query: 376 WREIVGCVTFGKD 388
+ V V GKD
Sbjct: 707 -KSSVEAVETGKD 718
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 114/227 (50%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G A++ L + + P+V +N +++ L KL E +Y+ G+ +
Sbjct: 129 GETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITY 188
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L+ G C G L AF +L+E +N PNV TY+ LM LC++G V+EA LL M
Sbjct: 189 STLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTK 248
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EG+ + V++N L+ G G+V+ ++ M KG PN SY ++ L KR E
Sbjct: 249 EGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDE 308
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A L+ ++ + M P+ V+Y LI G C + +LK+M +G
Sbjct: 309 AMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRG 355
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 164/364 (45%), Gaps = 52/364 (14%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
R + ++ ++ S R PN +Y II+ L + K + D+ + + G
Sbjct: 132 RSALKLLRMIEDRSTR----PNVVMYNTIIDGLCKDKLVNEAYDLYSEMD-------ARG 180
Query: 129 FFYNVIK----IYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV------SAK 177
F NVI IYG +AG++ +A L +M N P+V T+ ++++ L AK
Sbjct: 181 IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAK 240
Query: 178 --------------------------LYGEIQG---IYTSAAKLGVEIDACCLNILLKGL 208
L GE+Q ++ + + GV + NI++ L
Sbjct: 241 NLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRL 300
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++ ++ A +L E +N PN TYS+L+ G C+ G + A LL+ M G AD
Sbjct: 301 CKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADV 360
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ L+ L K +++ L +MK +G PN +Y ++ GL R A++L
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQH 420
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
++ + + +Y +I GLC + ++++ + KM + G +P + EI+ F KD
Sbjct: 421 LLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPD-AVTFEIIIRSLFEKD 479
Query: 389 NRNR 392
++
Sbjct: 480 QNDK 483
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + FN ++ LV K Y ++ G+E D LNIL+ C G + +F V
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K +PN T +TLM GLC KG V+++ +++ ++G D V++ L++GL K
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ +KLL ++ + PN Y ++ GL K EA +L M + P+ ++
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LI+G C + + +L +M+ + P
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINP 218
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 6/228 (2%)
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK---LGVEIDACCLNI 203
AI M P + T N+++N G++ +T K LG + + LN
Sbjct: 29 AISLFKQMQVKGIEPDLFTLNILINCFCH---LGQMTFSFTVLGKILKLGYQPNTITLNT 85
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+KGLC G ++ + + D+ Q + + +Y+TL++GLC+ G A LL +E
Sbjct: 86 LMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRS 145
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ V +N +I GL K V E L M +G +PN +Y ++YG + EA
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAF 205
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ MI + ++P+ +Y L+ LC + V++ +L M ++G P
Sbjct: 206 GLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKP 253
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 8/278 (2%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS 156
I+ L + K + + ++++V+ + D F N++ G+++ + L +
Sbjct: 16 IVGSLVKMKHYPTAISLFKQMQVKGI--EPDLFTLNILINCFCHLGQMTFSFTVLGKILK 73
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDACCLNILLKGLCENGN 213
P+ T N ++ L L GE++ + G ++D LL GLC+ G
Sbjct: 74 LGYQPNTITLNTLMKGLC---LKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGE 130
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+A +L ++ PNV Y+T++ GLC+ V EA+ L M++ GI + +T++
Sbjct: 131 TRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYST 190
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G G++ E LL M K PN +Y ++ L + + EAK L+ M E
Sbjct: 191 LIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEG 250
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P+ VSY L+ G C V++ + MVQ+G P
Sbjct: 251 VKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNP 288
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 133/286 (46%), Gaps = 2/286 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K+ NPN YT++++ L + + ++++ + E + + YN + + G +
Sbjct: 214 KNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV--KPNVVSYNTLMDGYCLIGEV 271
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + M P+V ++N++++ L +K E + + + + L
Sbjct: 272 QNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSL 331
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C+ G + +A +L E + +V TY++L+ LC+ N+++A L +M+ GI
Sbjct: 332 IDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 391
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ T+ LI GL K G+ + KL + + KGC N +Y ++ GL + EA
Sbjct: 392 QPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALA 451
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ +M P V+++ +I L + + + +L +M+ + +
Sbjct: 452 MKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDA----IEDIMQRIKVEKLCRFS---DGFFYNVIKI 136
+K NPN Y ++I++L ++KR D + +++ + V +S DGF
Sbjct: 283 QKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCK----- 337
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
GRI+ A++ L +M V T YTS
Sbjct: 338 ----LGRITSALDLLKEMYHRGQPADVVT--------------------YTS-------- 365
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
LL LC+N NL+ A + + ++ +PN TY+ L+ GLC+ G + A L
Sbjct: 366 -------LLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLF 418
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ + +G + T+N++ISGL K+G ++E + + +M+ GC P++ +++ ++ L +K
Sbjct: 419 QHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEK 478
Query: 317 KRFPEAKELVGRMICERM 334
+ +A++L+ MI + +
Sbjct: 479 DQNDKAEKLLHEMIAKDL 496
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 69/150 (46%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P + ++ ++ L + + A L ++M+ +GI+ D T NILI+ G++ +
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L ++ G PN+ + ++ GL K ++ +++ + VSY L++GLC
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+L+ + + P + M+ I+
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTII 157
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 136/285 (47%), Gaps = 2/285 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y II+ L++A + + + I+ L D + + + G++++A
Sbjct: 218 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL--KPDAVTFGAFILGYSKTGKMTEAA 275
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +M + P+ + +++N A E I+ LGV D + + GL
Sbjct: 276 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGL 335
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+NG ++ A V E ++ P+V TYS+L+ G C++G VE+AF L + M +GI +
Sbjct: 336 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 395
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+N L+ GL K G ++ KL + M KG P+S +Y ++ G + EA L
Sbjct: 396 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 455
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
M + + P Y L+HG C + +E + ++M+Q+GF +
Sbjct: 456 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL 500
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 133/300 (44%), Gaps = 5/300 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +Y+ +I A R + ++ + + D F YN I + AG++ +A
Sbjct: 183 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVA--PDIFCYNAIISCLSKAGKMEEAS 240
Query: 149 ETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L ++ P TF +L + K+ E + G+ + +L+ G
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT-EAAKYFDEMLDHGLMPNNPLYTVLING 299
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ GNL A + P+V+T S +HGL + G V+EA + ++ +G+ D
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 359
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T++ LISG KQG+VE+ +L + M KG PN Y ++ GL A++L
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
M + + P V+Y +I G C + V + + +M +G P ++ +V GC G
Sbjct: 420 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 479
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 129/298 (43%), Gaps = 3/298 (1%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ +L++ KR + P+ Y +IN L K +++++ L + + + +
Sbjct: 134 ALELLDEMEKR-NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL-KPNVVVYSTL 191
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
I Y + GRI +A L M P + +N +++ L A E G
Sbjct: 192 IMGYAS-EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 250
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
++ DA + G + G + A DE PN Y+ L++G + GN+ EA
Sbjct: 251 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 310
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+ + + G+ D T + I GL K G+V+E +K+ +K KG P+ +Y ++ G
Sbjct: 311 SIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 370
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +A EL M + ++P+ Y L+ GLC ++ + M ++G P
Sbjct: 371 CKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 428
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 1/273 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+ Y +I A R+++A T +M P + +++ + E+ I
Sbjct: 11 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV 70
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+ I+ N+L+ GLC+ G +E A +L C+PN RT+ L+ G C + N
Sbjct: 71 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN 130
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ A LL+ ME + V++ +I+GL + KLLE+M G PN Y
Sbjct: 131 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYST 190
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + R EA+ L+ M C ++P Y +I L +E+ L ++ +G
Sbjct: 191 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 250
Query: 369 FVPRMGMWRE-IVGCVTFGKDNRNRVYVTETVD 400
P + I+G GK Y E +D
Sbjct: 251 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD 283
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 35/293 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDA-----------------------IEDIMQRIKVEKLCRF 125
PN YT+I L +AKR + I+ M+ ++++ R
Sbjct: 8 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 67
Query: 126 SDGFF----------YNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
D YNV+ I+G G++ KA E L M + C P+ +TF L++
Sbjct: 68 KDVMVSCGIPINLITYNVL-IHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 126
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
G + K + A ++ GLC +L A +L++ +PNV
Sbjct: 127 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 186
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
YSTL+ G +G +EEA LL+ M G+ D +N +IS L K GK+EE L +
Sbjct: 187 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 246
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+G+G P++ ++ + G + EA + M+ + P+ Y LI+G
Sbjct: 247 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 1/238 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ T+ ++ L AK E + + K G++ D + L+ G G+++ +
Sbjct: 8 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 67
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D N+ TY+ L+HGLC+ G +E+A +L+ M + G ++ TF +LI G +
Sbjct: 68 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 127
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+ + ++LL+ M+ + P++ SY ++ GL K A +L+ +M + P+ V
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 187
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT-FGKDNRNRVYVTE 397
Y LI G ++ +E+ +L M G P + + I+ C++ GK Y+ E
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLE 245
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 119/291 (40%), Gaps = 53/291 (18%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + KA E +M P++ +N +++ L + + ++ + G+E D+
Sbjct: 374 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 433
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ G C++ N+ AF + E P + +P+ Y+ L+HG C++G++E+A L M
Sbjct: 434 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 493
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLL------------------------------ 291
+G A T++FN LI G K K++E +L
Sbjct: 494 KGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 552
Query: 292 ----------------------ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
E+M KG P+ +Y V+Y + EA +L +
Sbjct: 553 ANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 612
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + M + LI LC ++ + + +L +M + G P + +V
Sbjct: 613 VGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLV 663
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 202 NILLKGLCE-NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L K + E N ++ F + ++ + +P+ TY +++ C++ N+ EAF L + +
Sbjct: 554 NLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVV 613
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G+ ++LI+ L K+ + E KLL+ M G P+ A+ ++ + +
Sbjct: 614 GKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMD 673
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
EA + + + P + L++G N ED ++K++V
Sbjct: 674 EATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M +G+ +T T+ I+ +GL + ++ E E M+ G P+ + ++ G + +
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E + M+ + + ++Y LIHGLC +E +LK M+ G P
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKP 113
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 159/340 (46%), Gaps = 40/340 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
PN +Y+ II+ L + + + + V+ + +D Y+ + IYG + G++ +A
Sbjct: 197 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS--ADVVTYSTL-IYGFCIEGKLKEA 253
Query: 148 IETLFDMPSYNCWPSVKTFNL----------------VLNLLVSAKLYGEI--------- 182
I L +M P+V T+N+ VL +++ A + ++
Sbjct: 254 IGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313
Query: 183 ----------QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
Q ++ + + +GV D IL+ G C+N ++ A + E ++N P
Sbjct: 314 YFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ TYS+L+ GLC+ G + + L++ M G AD +T++ LI GL K G ++ + L
Sbjct: 374 IVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFN 433
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+MK + PN ++ +L GL R +A+E+ ++ + + +Y +I+G C Q
Sbjct: 434 KMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQG 493
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
L+E+ +L KM G +P + I+ F KD ++
Sbjct: 494 LLEEALTMLSKMEDNGCIPNAFTFETII-IALFKKDENDK 532
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + FN +L+ K Y + G++ D LNIL+ C G + F V
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K+ P+ T +TL+ GLC KG V++A +++ ++G + V++ LI+G+ K
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G +KLL ++ G+ PN Y ++ L + EA L M + +S V+
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI+G C + +++ +L +MV + P + + +V
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 134/291 (46%), Gaps = 38/291 (13%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I +LN+ K NPN Y ++++ L + + + ++ + K C D Y+ +
Sbjct: 254 IGLLNEMV-LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML--KACVKPDVITYSTL 310
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE------------- 181
+ + KA M P V T+ +++N K+ E
Sbjct: 311 MDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNM 370
Query: 182 IQGIYTSAAKL----------------------GVEIDACCLNILLKGLCENGNLEAAFY 219
+ GI T ++ + G D + L+ GLC+NG+L+ A
Sbjct: 371 VPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 430
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ ++ Q PN+ T++ L+ GLC+ G +++A + + + ++G + T+N++I+G
Sbjct: 431 LFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
KQG +EE + +L +M+ GC PN+ +++ ++ L K +A++L+ +MI
Sbjct: 491 KQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMI 541
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 16/250 (6%)
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+ +C+ D IK+ + GR++K P+V+ ++ +++ L +L
Sbjct: 171 INGVCKIGDT--RGAIKLLRKIDGRLTK--------------PNVEMYSTIIDALCKYQL 214
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
E G+++ G+ D + L+ G C G L+ A +L+E + PNV TY+
Sbjct: 215 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNI 274
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+ LC++G V+EA +L M + D +T++ L+ G +V++ + M G
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
P+ +Y ++ G K EA L M + M P V+Y LI GLC + V
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVW 394
Query: 359 WVLKKMVQQG 368
++ +M +G
Sbjct: 395 DLIDEMRDRG 404
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 136/298 (45%), Gaps = 10/298 (3%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRIS 145
+ P + I++ A+ K + + R++++ + D N+ I + +M G+I+
Sbjct: 55 HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQ--PDLITLNILINCFCHM-GQIT 111
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLN 202
L + P T N ++ L L G+++ KL G +++
Sbjct: 112 FGFSVLAKILKRGYPPDTVTLNTLIKGLC---LKGQVKKALHFHDKLLAQGFQLNQVSYA 168
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G+C+ G+ A +L + + +PNV YST++ LC+ V EA+GL M +
Sbjct: 169 TLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVK 228
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI AD VT++ LI G +GK++E + LL M K PN +Y ++ L + + EA
Sbjct: 229 GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
K ++ M+ + P ++Y L+ G V+ V M G P + + ++
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 137/272 (50%), Gaps = 10/272 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK---VEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PN +Y+ ++ +A R++ + + + + +E G ++ + G++
Sbjct: 181 PNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCR-----EGKVK 235
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KA + + M P+V T+N+++N + E + + + GV +DA N L+
Sbjct: 236 KATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLI 295
Query: 206 KGLCENGNLEAAFYVLDEF--PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
GL ++ A +L+E + EPNV T+++++HGLC+ G + +AF + + M G
Sbjct: 296 TGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENG 355
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VTFN+LI GL + KV++ M+L++ M G P+S +Y ++ G + A+
Sbjct: 356 CACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAE 415
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
L+ +M + + P V Y L+ LC Q ++E
Sbjct: 416 SLLSKMRRDGIEPELVHYIPLLAALCEQGMME 447
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 118/241 (48%), Gaps = 2/241 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R +A+ L DM + P V T+ ++ L A + + + G+E + +
Sbjct: 128 RTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYS 187
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
LL+G C+ G E V +E + EP+V Y+ L+ LC +G V++A ++++M
Sbjct: 188 CLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMER 247
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G++ + VT+N+LI+ + K+G V+E M L M KG ++ +Y ++ GL EA
Sbjct: 248 GLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEA 307
Query: 323 KELVGRMI-CERM-SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ MI E M P+ V++ +IHGLC + V M + G + + ++
Sbjct: 308 MGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLI 367
Query: 381 G 381
G
Sbjct: 368 G 368
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 161/375 (42%), Gaps = 67/375 (17%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKR---------------KDYNPNEALYTLIINKL 101
SP +L ++RD +S +VL ++ + P YT ++ L
Sbjct: 65 SPA-LLSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRAL 123
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AGRISKAIETLFDMP 155
+R +++ ++ + G +V+ YG + A + KA+E L +M
Sbjct: 124 CAERRTGQAVGLLRDMQ-------ASGVRPDVVT-YGTLIRGLCDAADVDKAVELLREMC 175
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
P+V ++ +L A + + ++ + G+E D L+ LC G ++
Sbjct: 176 ESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVK 235
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF---------------------- 253
A V+D+ ++ EPNV TY+ L++ +C++G+V+EA
Sbjct: 236 KATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLI 295
Query: 254 ----GLLERMESEG-----------IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
G+LE E+ G ++ + VTFN +I GL K G++ + ++ + M G
Sbjct: 296 TGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENG 355
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C N ++ ++ GLL + +A EL+ M + P +Y LI+G C V+ +
Sbjct: 356 CACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAE 415
Query: 359 WVLKKMVQQGFVPRM 373
+L KM + G P +
Sbjct: 416 SLLSKMRRDGIEPEL 430
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V TFN V++ L + + A+ G + N+L+ GL ++ A +
Sbjct: 323 PNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMEL 382
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+DE EP+ TYS L++G C+ V+ A LL +M +GI+ + V + L++ L +
Sbjct: 383 MDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCE 442
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
QG +E+ + M K C + +Y +++G + A+E + M+ E + P V+
Sbjct: 443 QGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVT 501
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI+ N + + VLK+M GFVP + ++ ++
Sbjct: 502 YSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLI 541
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ KA+E + +M S P T+++++N + + + + G+E +
Sbjct: 375 KVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYI 434
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
LL LCE G +E A DE K NC+ +V YST++HG C + + A L+ M E
Sbjct: 435 PLLAALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDE 493
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D+VT+++LI+ G + ++L++M G P+ A + ++ G K +
Sbjct: 494 GLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKV 553
Query: 323 KELVGRM 329
EL+ M
Sbjct: 554 LELIREM 560
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 7/229 (3%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ +A + M C ++ TFNL++ L+ + + A G+E D+
Sbjct: 339 GRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTY 398
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+IL+ G C+ ++ A +L + + EP + Y L+ LCE+G +E+A + M
Sbjct: 399 SILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMH- 457
Query: 262 EGIDADTVTFNILISG---LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
+ D V ++ +I G LR + EE L+ M +G P+S +Y ++ +
Sbjct: 458 KNCKLDVVAYSTMIHGACRLRDRKSAEE---FLKHMLDEGLIPDSVTYSMLINMFANSGD 514
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
A+ ++ +M P + LI G + E V ++++M +
Sbjct: 515 LGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAK 563
>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 669
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 133/259 (51%), Gaps = 16/259 (6%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NP+ + + L + +R+ +E+++ ++ E C + F N++ G ++ A
Sbjct: 411 NPDTISFNAALKALCRTERWYDVEELIAQMLRED-CPLIEMTF-NILIDSLCQHGLVNHA 468
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL----GVEIDACCLNI 203
IE MP Y C P + T++ ++N QG+ SA +L + D N
Sbjct: 469 IEVFEQMPKYRCTPDIVTYSSLINGFSE-------QGLVESAIELFQSMPCKPDIFSYNA 521
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+LKGLC E A ++ +++C PN T++ L++ LC+KG + A + ++M G
Sbjct: 522 VLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYG 581
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D T+N LI+G +QG++++ + LL M C P++ SY L GL +R+ EA+
Sbjct: 582 STPDIFTYNALINGFSEQGRLDDALNLLSTM---SCKPDAISYNSTLKGLCRAERWKEAE 638
Query: 324 ELVGRMICERMSPSFVSYK 342
E+V M+ ++ P+ V++K
Sbjct: 639 EIVAEMLRKKCPPNEVTFK 657
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 138/281 (49%), Gaps = 8/281 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RKD PNEA ++++ + L Q D +++++++ + CR D YN + Y + GR
Sbjct: 340 RKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQ-KYGCR-PDVVIYNTLINYFSEQGR 397
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ L D S C P +FN L L + + +++ + + + NI
Sbjct: 398 VDDAL-MLLD--SMLCNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNI 454
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ LC++G + A V ++ PK C P++ TYS+L++G E+G VE A L + M +
Sbjct: 455 LIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCK- 513
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D ++N ++ GL + + E+ +L+ M K C PN ++ ++ L K A
Sbjct: 514 --PDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAI 571
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
E+ +M +P +Y LI+G Q ++D +L M
Sbjct: 572 EVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTM 612
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 140/292 (47%), Gaps = 8/292 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L AK+++ E++M+ + + C ++ F I+ + G + A+
Sbjct: 208 PDTYTYNTVLKGLCGAKQWEKAEELMEEM-IRNNCHPNEVTFATQIRSFCQ-NGLLDHAV 265
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L MP Y C P V ++ ++N G + + + + C N LKGL
Sbjct: 266 QLLERMPRYGCTPDVVIYSTLVNGFSEQ---GRVDDALVLLNTMLCKPNTVCYNAALKGL 322
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C + ++ E +++C PN T+S L LC+ G V+ A ++E+M+ G D
Sbjct: 323 CMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDV 382
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +N LI+ +QG+V++ + LL+ M C P++ S+ L L +R+ + +EL+ +
Sbjct: 383 VIYNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQ 439
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ E +++ LI LC LV V ++M + P + + ++
Sbjct: 440 MLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLI 491
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 10/285 (3%)
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
++I KL +R E ++ +K +D +N + GR++ A E + +
Sbjct: 115 ILIKKLCAHRRLADAERVLDALKESG---SADAVSHNTLVAGYCRDGRLADA-ERVLEAA 170
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
+ +V T+ ++N + G + A + V D N +LKGLC E
Sbjct: 171 KVSGAANVVTYTALINGYCRS---GRLADALNLIASMPVAPDTYTYNTVLKGLCGAKQWE 227
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A +++E + NC PN T++T + C+ G ++ A LLERM G D V ++ L+
Sbjct: 228 KAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLV 287
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+G +QG+V++ + LL M C PN+ Y L GL +R+ + EL+ M+ +
Sbjct: 288 NGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCP 344
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P+ ++ L LC LV+ V+++M + G P + ++ ++
Sbjct: 345 PNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLI 389
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 128/292 (43%), Gaps = 8/292 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y + L A+R+ + +++ + V K C ++ F + G + A+
Sbjct: 310 PNTVCYNAALKGLCMAERWKDVGELIAEM-VRKDCPPNEATFSMLTSCLCQH-GLVDCAM 367
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E + M Y C P V +N ++N G + + D N LK L
Sbjct: 368 EVVEQMQKYGCRPDVVIYNTLINYFSEQ---GRVDDALMLLDSMLCNPDTISFNAALKAL 424
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C ++ + +++C T++ L+ LC+ G V A + E+M D
Sbjct: 425 CRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDI 484
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ LI+G +QG VE ++L + M C P+ SY VL GL R+ +A EL+
Sbjct: 485 VTYSSLINGFSEQGLVESAIELFQSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAN 541
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + P+ +++ LI+ LC + + V K+M + G P + + ++
Sbjct: 542 MARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALI 593
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 6/195 (3%)
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
AAK+ + L+ G C +G L A ++ P P+ TY+T++ GLC
Sbjct: 169 AAKVSGAANVVTYTALINGYCRSGRLADALNLIASMPVA---PDTYTYNTVLKGLCGAKQ 225
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
E+A L+E M + VTF I + G ++ ++LLERM GC P+ Y
Sbjct: 226 WEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYST 285
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G ++ R +A L+ M+C+ P+ V Y + GLC + +DV ++ +MV++
Sbjct: 286 LVNGFSEQGRVDDALVLLNTMLCK---PNTVCYNAALKGLCMAERWKDVGELIAEMVRKD 342
Query: 369 FVPRMGMWREIVGCV 383
P + + C+
Sbjct: 343 CPPNEATFSMLTSCL 357
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+K LC + L A VLD K++ + +++TL+ G C G + +A +LE +
Sbjct: 114 NILIKKLCAHRRLADAERVLDAL-KESGSADAVSHNTLVAGYCRDGRLADAERVLEAAKV 172
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G A+ VT+ LI+G + G++ + + L+ M P++ +Y VL GL K++ +
Sbjct: 173 SGA-ANVVTYTALINGYCRSGRLADALNLIASMP---VAPDTYTYNTVLKGLCGAKQWEK 228
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A+EL+ MI P+ V++ I C L++ +L++M + G P + ++ +V
Sbjct: 229 AEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLV 287
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 158/340 (46%), Gaps = 40/340 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P+ +Y II+ + + + + + V+ + +D YN + IYG + G++ +A
Sbjct: 197 PDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGIS--ADVVTYNTL-IYGFCIVGKLKEA 253
Query: 148 IETLFDMPSYNCWPSVKTFNL----------------VLNLLVSAKLYGEI--------- 182
I L +M P+V T+N+ VL +++ A + ++
Sbjct: 254 IGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313
Query: 183 ----------QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
Q ++ + + +GV D IL+ G C+N ++ A + E ++N P
Sbjct: 314 YFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ TYS+L+ GLC+ G + + L++ M G AD +T++ LI GL K G ++ + L
Sbjct: 374 IVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFN 433
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+MK + PN ++ +L GL R +A+E+ ++ + + +Y +I+G C Q
Sbjct: 434 KMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQG 493
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
L+E+ +L KM G +P + I+ F KD ++
Sbjct: 494 LLEEALTMLSKMEDNGCIPNAFTFETII-IALFKKDENDK 532
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G AI+ L + P V +N +++ + +L E G+++ A G+ D
Sbjct: 178 GDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTY 237
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C G L+ A +L+E + PNV TY+ L+ LC++G V+EA +L M
Sbjct: 238 NTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLK 297
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ D +T++ L+ G +V++ + M G P+ +Y ++ G K E
Sbjct: 298 ACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDE 357
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A L M + M P V+Y LI GLC + V ++ +M +G
Sbjct: 358 ALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 103/187 (55%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+ +M N P + T++ +++ L + + + G D +
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSS 414
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+NG+L+ A + ++ Q PN+ T++ L+ GLC+ G +++A + + + ++G
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ T+N++I+G KQG +EE + +L +M+ GC PN+ +++ ++ L K +A+
Sbjct: 475 YHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAE 534
Query: 324 ELVGRMI 330
+L+ +MI
Sbjct: 535 KLLRQMI 541
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 6/214 (2%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAA 217
P + T N+++N G+I ++ AK+ G D LN L+KGLC G ++ A
Sbjct: 92 PDLITLNILINCFCHM---GQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+ D+ Q + N +Y+TL++G+C+ G+ A L +++ D V +N +I
Sbjct: 149 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDA 208
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
+ K V E L M KG + +Y ++YG + EA L+ M+ + ++P+
Sbjct: 209 MCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPN 268
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y L+ LC + V++ VL M++ P
Sbjct: 269 VYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + FN +L+ K Y + G++ D LNIL+ C G + F V
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K+ P+ T +TL+ GLC KG V++A +++ ++G + V++ LI+G+ K
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G +K L ++ G+ P+ Y ++ + + EA L M + +S V+
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI+G C +++ +L +MV + P + + +V
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 140/296 (47%), Gaps = 3/296 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I +LN+ K NPN Y ++++ L + + + ++ + K C D Y+ +
Sbjct: 254 IGLLNEMV-LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML--KACVKPDVITYSTL 310
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+ + KA M P V T+ +++N K+ E ++ + +
Sbjct: 311 MDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNM 370
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ L+ GLC++G + + ++DE + +V TYS+L+ GLC+ G+++ A
Sbjct: 371 VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 430
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L +M+ + I + TF IL+ GL K G++++ ++ + + KG + N +Y ++ G
Sbjct: 431 LFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ EA ++ +M P+ +++ +I L + + + +L++M+ +G +
Sbjct: 491 KQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 137/282 (48%), Gaps = 6/282 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
+ I++ L ++KR +E KV K +D YNV+ + R +KA+E L +
Sbjct: 174 FNTILDVLCKSKR---VEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKE 230
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P++ ++N +L A E + K EID ++ G G
Sbjct: 231 MVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGE 290
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A V D K+ P+V TY+ + LC+K NV+ A + E M +G +++T+N+
Sbjct: 291 IKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNL 350
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I GL +G++E M+ + RMK GC PN +Y V+ D+ +A +L +M
Sbjct: 351 VIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGD 410
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDV---DWVLKKMVQQGFVPR 372
P+ +Y LI + +K +D+ +L +MV +GFVPR
Sbjct: 411 CLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPR 452
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 5/246 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ PN Y ++ +A + + D +K ++ C + VI +G +AG
Sbjct: 233 KRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMK-KRDCEIDVITYTTVIHGFG-VAGE 290
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I +A + M PSV T+N + +L I+ G ++ N+
Sbjct: 291 IKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNL 350
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++GLC G +E A + CEPNV+TY+ ++ C++G +++A L ++M S
Sbjct: 351 VIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGD 410
Query: 264 IDADTVTFNILISGLRKQGKVEEGM---KLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ T+NILIS + + K ++ + LL M +G P ++ VL GLL
Sbjct: 411 CLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGNQG 470
Query: 321 EAKELV 326
AKE++
Sbjct: 471 FAKEIL 476
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 159/333 (47%), Gaps = 11/333 (3%)
Query: 52 HKDWLSPTEVLKIFSNLRD---PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD 108
D + T+++K F N R+ V+ +L ++ K P+ Y +I+ +A R +
Sbjct: 7 QPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGK-----PDVFAYNAVISGFCKANRIE 61
Query: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM-PSYNCWPSVKTFN 167
+ + ++ R+K + D +N++ G+I A++ ++ NC P++ T+
Sbjct: 62 SAKTVLDRMKRKGFS--PDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+++ + E + G+E D N++ +GLC+ G ++ AF + +
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
C+P+V TY+ L+ L +G +E + + S G + + VT++ILIS L + GK+EE
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+ L++ MK KG P++ Y ++ + + A E + MIC+ P V+Y ++
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAA 299
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LC + + K+ + G P + + ++
Sbjct: 300 LCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTML 332
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 138/306 (45%), Gaps = 2/306 (0%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ V + K + P YT++I D ++ + L D F YNVI
Sbjct: 99 LKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGL--EPDTFTYNVI 156
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G++ +A E + + S C P V T+N++L L++ + E + + G
Sbjct: 157 TRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGC 216
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E + +IL+ LC +G +E + ++ ++ P+ Y L+ C +G ++ A
Sbjct: 217 EPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIE 276
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L+ M +G D V +N +++ L K G + +++ ++ GC PN +SY +L L
Sbjct: 277 FLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALW 336
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
A ++ +M+ + + P ++Y LI LC +V++ +L M+ F P +
Sbjct: 337 SSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIV 396
Query: 375 MWREIV 380
++ ++
Sbjct: 397 SYKTVL 402
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 143/327 (43%), Gaps = 18/327 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KDY P+ L T +I ++ D +M + EK + D F YN + A RI
Sbjct: 4 KDYQPDVILCTKLIKGFFNSRNIDKATRVMGIL--EKHGK-PDVFAYNAVISGFCKANRI 60
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI--DACC-- 200
A L M P V T N+++ +G A K+ E+ D C
Sbjct: 61 ESAKTVLDRMKRKGFSPDVVTHNIMIGTFCG-------KGKIDLALKVFEELLKDNNCKP 113
Query: 201 ----LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
IL++ G ++ A +LDE + EP+ TY+ + GLC++G V+ AF +
Sbjct: 114 TLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFV 173
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ S G D +T+NIL+ L QGK +EG K + + +GC PN +Y ++ L
Sbjct: 174 RTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRD 233
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ E+ LV M + ++P Y LI C + ++ L M+ GF+P + +
Sbjct: 234 GKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNY 293
Query: 377 REIVGCVTFGKDNRNRVYVTETVDSLA 403
I+ + + + V + +D +
Sbjct: 294 NTIMAALCKNGNGDHAVEIFGKLDEVG 320
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 81/147 (55%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ LC+NGN + A + + + C PNV +Y+T++ L G+ A G++ +M S
Sbjct: 294 NTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLS 353
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GID D +T+N LIS L + G V+E + LL M PN SY+ VL GL R +
Sbjct: 354 KGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDD 413
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGL 348
A E++ MI P+ +Y LI G+
Sbjct: 414 AIEVLAAMIENGCQPNETTYTLLIEGI 440
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 144/293 (49%), Gaps = 4/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKA 147
PN +Y II+ L + K D+ + V+++ F D Y + IYG + GR+ +A
Sbjct: 202 PNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRI--FPDVVTYTTL-IYGCLIVGRLKEA 258
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ M N P V TFN++++ L + + + K GV+ + N L+ G
Sbjct: 259 VGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDG 318
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
A +V + ++ P+V++YS +++GLC+ V+EA L + M S+ + +
Sbjct: 319 YFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPN 378
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TVT+N LI GL K G++ + L+ M +G + +Y +L L + +A L+
Sbjct: 379 TVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLIT 438
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ + + P+ +Y L+ GLC ++D V + ++ +G+ + M+ +V
Sbjct: 439 KIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMV 491
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + TFN+++N + KLG D + L+KGLC NG + A +
Sbjct: 97 PDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHF 156
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+ + + +Y TL++GLC+ G A +L +++ + + V +N +I L K
Sbjct: 157 HDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCK 216
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
V L M K +P+ +Y ++YG L R EA L +M+ + + P +
Sbjct: 217 DKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYT 276
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ L+ GLC + ++ VL M++QG
Sbjct: 277 FNILVDGLCKEGEMKKARNVLAVMIKQG 304
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 154 MPSY--NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG----------------VE 195
+PS+ N +V +FN +L++ + E I +S KL ++
Sbjct: 37 LPSFIDNVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQ 96
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D NIL+ C G+L AF VL + K P+ T +TL+ GLC G V EA
Sbjct: 97 PDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHF 156
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+ + ++G D V++ LI+GL K G+ +++L ++ G PN Y ++ L
Sbjct: 157 HDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCK 216
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
K A +L MI +R+ P V+Y LI+G
Sbjct: 217 DKLVIHASDLCSEMIVKRIFPDVVTYTTLIYG 248
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 104/192 (54%), Gaps = 6/192 (3%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACC 200
+ +A+ +M S + P+ T+N +++ L+ YG I + ++ G D
Sbjct: 360 VDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLK---YGRISDAWDLVNEMHNRGQPADVIT 416
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ LL LC+N ++ A ++ + Q +PN+ TY+ L+ GLC+ G +++A + + +
Sbjct: 417 YSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLL 476
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G D +N++++GL K+G +E + L+ +M+ GC P++ +Y+ ++ L + +
Sbjct: 477 IKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKND 536
Query: 321 EAKELVGRMICE 332
+A +L+ MI +
Sbjct: 537 KAVKLLREMIVQ 548
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 111/224 (49%)
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+KA M P V+++++++N L K+ E ++ + + N L
Sbjct: 326 NKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSL 385
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GL + G + A+ +++E + +V TYS+L+ LC+ V++A L+ +++ +GI
Sbjct: 386 IDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGI 445
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ T+ IL+ GL K G++++ + + + KG + + Y ++ GL + F EA
Sbjct: 446 QPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALS 505
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
LV +M P V+Y+ L+ L + +L++M+ QG
Sbjct: 506 LVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 1/197 (0%)
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
L V+ + N ++ LC++ + A + E + P+V TY+TL++G G ++E
Sbjct: 198 LLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKE 257
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A GL +M + I D TFNIL+ GL K+G++++ +L M +G N +Y ++
Sbjct: 258 AVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMD 317
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G K+ +A + M ++P SY +I+GLC K+V++ + K+M + P
Sbjct: 318 GYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAP 377
Query: 372 RMGMWREIV-GCVTFGK 387
+ ++ G + +G+
Sbjct: 378 NTVTYNSLIDGLLKYGR 394
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 108/216 (50%), Gaps = 4/216 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-G 142
R+ P+ Y+++IN L + K D ++ + + + + + YN + I G + G
Sbjct: 337 RRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMA--PNTVTYNSL-IDGLLKYG 393
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RIS A + + +M + V T++ +L+ L + + T G++ +
Sbjct: 394 RISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYT 453
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ GLC+NG L+ A V + + +V+ Y+ +++GLC++G +EA L+ +ME
Sbjct: 454 ILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDN 513
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
G D VT+ L+ L + K ++ +KLL M +G
Sbjct: 514 GCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N +L L + + A + + +P++ T++ L++ C G++ AF +L ++
Sbjct: 67 FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G DTVT LI GL GKV E + + + KG + LD+
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFH-------------LDQ---- 169
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
VSY LI+GLC VL+K+ P + M+ I+
Sbjct: 170 ------------------VSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTII 211
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 29/273 (10%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ--- 183
D YN + A S+A++ L M P+ T+N++L A G+IQ
Sbjct: 196 DVVTYNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIILKGFFRA---GQIQHAW 252
Query: 184 GIYTSAAKLGVEIDACCLNI-----LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ K G + ++C +I ++ GL G L+ A + DE K+ C P+V TY+
Sbjct: 253 NFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNA 312
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+ +C+KGNVE+A + + M + + VT+ +LI GL GK++ MKL+ERMKG+G
Sbjct: 313 LIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEG 372
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC--ERMS------PSFVSYKKLIHGLCN 350
C P + Y +L + F E + + + +C ERMS P+ +Y +I +
Sbjct: 373 CEPVVQT-----YNVLIRYSFEEGE--IEKALCLFERMSKGEDCLPNQDTYNIIISAMFV 425
Query: 351 QKLVEDVDWVLK---KMVQQGFVPRMGMWREIV 380
+K ED+ + +MV++G++PR M ++
Sbjct: 426 RKRAEDMATAARMVMEMVERGYLPRRFMLNRVL 458
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N LL L ++ + A ++ ++ P+V TY+TL G C + A LL
Sbjct: 162 DLPLFNSLLDALGKSRHASKAASLVRAL-ERRFPPDVVTYNTLADGWCRAKDTSRALDLL 220
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG-----CYPNSASYQEVLY 311
+M G+ T+NI++ G + G+++ +MK +G C P+ SY +++
Sbjct: 221 RQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIH 280
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
GL + +A++L M E +PS +Y LI +C + VED V MV++ ++P
Sbjct: 281 GLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMP 340
Query: 372 RMGMWREIV-GCVTFGKDNR 390
+ + ++ G GK +R
Sbjct: 341 NVVTYTVLIRGLCHVGKIDR 360
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RKDY PN YT++I L + D +M+R+K E YNV+ Y G
Sbjct: 335 RKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQT--YNVLIRYSFEEGE 392
Query: 144 ISKAIETLFDMPSY--NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI----- 196
I KA+ LF+ S +C P+ T+N++++ + K ++ +AA++ +E+
Sbjct: 393 IEKAL-CLFERMSKGEDCLPNQDTYNIIISAMFVRKRAEDM----ATAARMVMEMVERGY 447
Query: 197 --DACCLNILLKGLCENGN 213
LN +L GL GN
Sbjct: 448 LPRRFMLNRVLNGLMLTGN 466
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 104/196 (53%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
++ K G D +IL+ GLC+ G++ +Y+L E + PN+ +YS+L+HGLC
Sbjct: 305 VFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLC 364
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
G VE AF L +R++ +G D + ++I++ G + +E L M P++
Sbjct: 365 RAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAY 424
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++Y ++ EA E+ MIC+ + P+ V+ L+HG N+ L+ + L K+
Sbjct: 425 NYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKV 484
Query: 365 VQQGFVPRMGMWREIV 380
Q G VP + +R I+
Sbjct: 485 RQFGVVPNLCTYRVII 500
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 129/298 (43%), Gaps = 2/298 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R PN Y+ +++ L +A R + ++ +R+K + D Y+++
Sbjct: 346 RNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGF--KHDHIVYSIVLHGCCQHLD 403
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ + DM +N P ++ ++ + E ++ G+ + I
Sbjct: 404 LEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTI 463
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G G + AF LD+ + PN+ TY +++GLC+ + +G+ M G
Sbjct: 464 LVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRG 523
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
DTV ++I+I G K ++E +L +M +G PN +Y ++ GL + PE
Sbjct: 524 YVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVM 583
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
L MI E ++P + Y LI C + ++ + ++M +G ++ ++G
Sbjct: 584 TLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIG 641
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 8/214 (3%)
Query: 164 KTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE 223
+ + V+ + V ++ + Y A K+GVE+ C N LLKGL E + + D+
Sbjct: 144 QVYATVIRVFVELSMFEDALVTYVEAKKVGVELQVC--NFLLKGLVEGNQIMYVRSLFDD 201
Query: 224 FPKQNCEPNVRTYSTLM----HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
PN+ +YS LM HG K +EEA LL ME EG+ + T+ + GL
Sbjct: 202 MKISGPSPNIYSYSVLMSMYTHG--AKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLC 259
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
+ +V+ L+ + +G NS + V++G + +A E+ M P
Sbjct: 260 RAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVH 319
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
SY L+ GLC Q V ++L +M + G P +
Sbjct: 320 SYSILVDGLCKQGDVLTGYYMLVEMARNGITPNL 353
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 149/368 (40%), Gaps = 80/368 (21%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS---DGFFYNVIKIYGNMA-GRI 144
PN A Y + L +AK+ + + +Q LC+ + + +N + I+G G++
Sbjct: 246 PNAATYGTYLYGLCRAKQVKSAWNFLQ-----MLCQRGYPCNSYCFNAV-IHGFCHDGQV 299
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLV---------------------------SAK 177
KA+E M P V +++++++ L S+
Sbjct: 300 HKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSL 359
Query: 178 LYGEIQG--------IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
L+G + ++ G + D +I+L G C++ +LE + + ++ N
Sbjct: 360 LHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNF 419
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
P+ YS+L++ C ++EA + E M +GI + VT IL+ G +G + E
Sbjct: 420 VPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFL 479
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKR------------------------------- 318
L++++ G PN +Y+ ++ GL +
Sbjct: 480 FLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFV 539
Query: 319 ----FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
EA L +M+ E P+ +Y LI+GLC+ + +V + K M+ +G P
Sbjct: 540 KALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRI 599
Query: 375 MWREIVGC 382
++ ++ C
Sbjct: 600 LYTSLIAC 607
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 107/230 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G I +A L + + P++ T+ +++N L ++ GI+ K G D
Sbjct: 472 GLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLY 531
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+I++ G + +L+ AF + + + +PN+ TY++L++GLC + E L + M
Sbjct: 532 SIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIG 591
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EG+ D + + LI+ K+ ++ +++ M+ +G +S Y ++ G
Sbjct: 592 EGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDG 651
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A+ + M+ + ++P+ V+Y LI G + + M+Q G P
Sbjct: 652 AQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAP 701
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 133/313 (42%), Gaps = 5/313 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + + + +Y+++++ Q + D+ + D + Y+ + IY
Sbjct: 380 KDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNF--VPDAYNYSSL-IYAYCRH 436
Query: 143 R-ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R + +A+E M P+V T ++++ + L GE + GV + C
Sbjct: 437 RQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTY 496
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+++ GLC+ + + + K+ P+ YS ++ G + +++EAF L +M
Sbjct: 497 RVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVD 556
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EG + T+ LI+GL K+ E M L + M G+G P+ Y ++ +
Sbjct: 557 EGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKA 616
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE-IV 380
A E+ M E +S Y LI G ++ +++M+ +G P + + + I+
Sbjct: 617 ALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLII 676
Query: 381 GCVTFGKDNRNRV 393
G G + + V
Sbjct: 677 GYFKIGDEKKAMV 689
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 141/286 (49%), Gaps = 5/286 (1%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM--AGRISKAIETLFDM 154
++ L KR ++ R E CR + ++K + A + + + D
Sbjct: 125 LLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDG 184
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
+C P V ++N+V+N + G++ Y+ ++GV D N ++ GLC+ +
Sbjct: 185 QDSSCSPDVVSYNIVINGFFNE---GQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEV 241
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A V + ++ +PN TY+T++ GLC+ V+ A G+ ++M +G+ VT+N +
Sbjct: 242 DRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTI 301
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I GL K V+ + ++M +G P+ +Y ++ GL + +A+ + +MI + +
Sbjct: 302 IDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGV 361
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P ++Y +I GLC + V+ + V ++M+ +G P G + ++
Sbjct: 362 KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLI 407
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 138/301 (45%), Gaps = 2/301 (0%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
Q K PN Y II+ L +A+ D E + Q++ V+K + S+ YN I
Sbjct: 249 QQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKM-VDKGVKPSN-VTYNTIIDGLC 306
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
A + +A M P T+N +++ L A+ + +G++ GV+ D
Sbjct: 307 KAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNL 366
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
I++ GLC+ +++ A V + + +PN TY+ L+HG G EE ++ M
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ ++ D T+ +L+ L K GK E L + M KG P+ Y +L+G K
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
E +L+ M+ +SP+ + +I + ++++V + KM QQG P + + +
Sbjct: 487 SEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTL 546
Query: 380 V 380
+
Sbjct: 547 I 547
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 149/325 (45%), Gaps = 39/325 (12%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GR 143
K P+ YT+II+ L +A+ D E + Q++ ++K + ++G YN + I+G ++ G+
Sbjct: 359 KGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQM-IDKGVKPNNGT-YNCL-IHGYLSTGQ 415
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ ++ + +M +++ P V T+ L+L+ L E + ++ S + G++ I
Sbjct: 416 WEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGI 475
Query: 204 LLKGLCENGNL-----------------------------------EAAFYVLDEFPKQN 228
+L G + G L + ++ + +Q
Sbjct: 476 MLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG 535
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
PNV TY TL+ LC+ G V++A +M +EG+ + V FN L+ GL K E+
Sbjct: 536 LSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVE 595
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+L M +G P+ + VL L + R EA+ L+ M+C + P +SY LI G
Sbjct: 596 ELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGH 655
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRM 373
C +++ +L MV G P +
Sbjct: 656 CFASRMDEAVKLLDGMVSAGLKPNI 680
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 142/294 (48%), Gaps = 4/294 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y II+ L +A+ D ED+ Q++ VEK + + YN I I G +
Sbjct: 222 SPDVVTYNTIIDGLCKAQEVDRAEDVFQQM-VEKGVK-PNNVTYNTI-IDGLCKAQEVDM 278
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E +F M PS T+N +++ L A+ +G++ GV+ D N ++
Sbjct: 279 AEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIID 338
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ ++ A V + + +P+ TY+ ++ GLC+ +V+ A G+ ++M +G+
Sbjct: 339 GLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKP 398
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T+N LI G G+ EE ++ ++ M P+ +Y +L L + EA+ L
Sbjct: 399 NNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLF 458
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI + + PS Y ++HG + + ++ +L MV G P ++ ++
Sbjct: 459 DSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVI 512
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 136/292 (46%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y II+ L +A+ D E + Q++ ++K + D Y +I A + +A
Sbjct: 328 PDHVTYNTIIDGLCKAQAIDKAEGVFQQM-IDKGVK-PDNLTYTIIIDGLCKAQSVDRAE 385
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M P+ T+N +++ +S + E+ + +E D +LL L
Sbjct: 386 GVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYL 445
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+NG A + D ++ +P+V Y ++HG +KG + E LL M + GI +
Sbjct: 446 CKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNH 505
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
FN +I K+ ++E M + +MK +G PN +Y ++ L R +A +
Sbjct: 506 RIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQ 565
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI E ++P+ V + L++GLC E V+ + +M+ QG P + + ++
Sbjct: 566 MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVL 617
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 126/296 (42%), Gaps = 2/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+ Y II+ L +A+ D E + Q++ +++ + D YN I A I
Sbjct: 289 KGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM-IDRGVK-PDHVTYNTIIDGLCKAQAI 346
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA M P T+ ++++ L A+ +G++ GV+ + N L
Sbjct: 347 DKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCL 406
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G G E + E + EP+V TY L+ LC+ G EA L + M +GI
Sbjct: 407 IHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGI 466
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ I++ G K+G + E LL M G PN + V+ + E
Sbjct: 467 KPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMH 526
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ +M + +SP+ V+Y LI LC V+D +M+ +G P ++ +V
Sbjct: 527 IFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLV 582
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 14/268 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------ 141
+PN ++ +I A+ D + I ++K + G NV+ YG +
Sbjct: 502 SPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQ-------GLSPNVVT-YGTLIDALCKL 553
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ A+ M + P+ FN ++ L + + +++ ++ G+ D
Sbjct: 554 GRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFF 613
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L LC+ G + A ++D +P+V +Y+TL+ G C ++EA LL+ M S
Sbjct: 614 NTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS 673
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ + V++N L+ G K G+++ L M KG P +Y +L GL RF E
Sbjct: 674 AGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSE 733
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC 349
A+EL MI R S +Y ++ G C
Sbjct: 734 ARELYVNMIKSRKLWSICTYSIILDGFC 761
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 132/289 (45%), Gaps = 5/289 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y ++IN + D + + V D YN I A + +A
Sbjct: 190 SPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVS-----PDVVTYNTIIDGLCKAQEVDRA 244
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ M P+ T+N +++ L A+ +G++ GV+ N ++ G
Sbjct: 245 EDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDG 304
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ ++ A V + + +P+ TY+T++ GLC+ +++A G+ ++M +G+ D
Sbjct: 305 LCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPD 364
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+ I+I GL K V+ + ++M KG PN+ +Y +++G L ++ E + +
Sbjct: 365 NLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIK 424
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
M + P +Y L+ LC + + M+++G P + ++
Sbjct: 425 EMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIY 473
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYV-LDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
K G +D +N LLKGLC+ + A +V L + P+ C V +Y+TL+ GLC++
Sbjct: 112 KTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRA 171
Query: 250 EEAFGLLERM---ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
EEA LL M + D V++NI+I+G +G+V++ L M G P+ +Y
Sbjct: 172 EEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTY 228
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL + A+++ +M+ + + P+ V+Y +I GLC + V+ + V +KMV
Sbjct: 229 NTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVD 288
Query: 367 QGFVPRMGMWREIV 380
+G P + I+
Sbjct: 289 KGVKPSNVTYNTII 302
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGRI A +M P V+T+N +LN L + + E + +Y + K C
Sbjct: 693 AGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICT 752
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+I+L G C+N + AF + + + ++ T++ ++ GL + G E+A L +
Sbjct: 753 YSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIP 812
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ VT+ ++ L ++G +EE L M+ G PNS ++ LLD+ P
Sbjct: 813 ANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIP 872
Query: 321 EAKELVGRM 329
A + ++
Sbjct: 873 RAGAYLSKL 881
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 129/323 (39%), Gaps = 53/323 (16%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN ++ ++ L +++ +E++ + + + D F+N + GR+ +A
Sbjct: 573 PNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGI--RPDIVFFNTVLCNLCKEGRVMEAR 630
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M P V ++N +++ A E + G++ + N LL G
Sbjct: 631 RLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGY 690
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL------------------------- 243
C+ G ++ A+ + E ++ P V TY+T+++GL
Sbjct: 691 CKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSI 750
Query: 244 ----------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
C+ +EAF + + + S + D +TFNI+I GL K G+ E+ M L
Sbjct: 751 CTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAA 810
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+ G P+ +Y+ + L+++ E L M +P+ LI
Sbjct: 811 IPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALI-------- 862
Query: 354 VEDVDWVLKKMVQQGFVPRMGMW 376
+K++ +G +PR G +
Sbjct: 863 --------RKLLDRGEIPRAGAY 877
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 4/187 (2%)
Query: 141 AGRISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+GR S+A E +M S W S+ T++++L+ + E I+ S + +++D
Sbjct: 728 SGRFSEARELYVNMIKSRKLW-SICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDII 786
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NI++ GL + G E A + P P+V TY + L E+G++EE L M
Sbjct: 787 TFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVM 846
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E G ++ N LI L +G++ L ++ K + AS +L L ++ +
Sbjct: 847 EKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKN-FSLEASTTSMLISLFSREEY 905
Query: 320 PE-AKEL 325
+ AK L
Sbjct: 906 QQHAKSL 912
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 16/219 (7%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKL---CRFS---DGFFYNVIKI 136
RK P Y I+N L ++ RF +A E + IK KL C +S DGF N
Sbjct: 708 RKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKN---- 763
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+A + + S + + TFN++++ L + ++ + G+
Sbjct: 764 -----NCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVP 818
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
++ + L E G+LE + K PN + L+ L ++G + A L
Sbjct: 819 SVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYL 878
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
+++ + + T ++LIS ++ + L E+ +
Sbjct: 879 SKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPEKCR 917
>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 629
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 138/299 (46%), Gaps = 12/299 (4%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q K + PN +Y +++ L + + +M I+ +D F +I Y
Sbjct: 200 LLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEEP-----NDVTFNVLIAAY 254
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+ +A+ L S P V T V+ +L +A E + G +D
Sbjct: 255 CKEENLV-QALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVD 313
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N LL+G C G ++ A L E ++ C PNV TY+ L+ G C+ G + A +
Sbjct: 314 VVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFN 373
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM---KGKGCYPNSASYQEVLYGLL 314
M+++GI + T++ LI GL G++EEG+K+LE M KG G + Y VLYGL
Sbjct: 374 DMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKG-GSGGRISPYNSVLYGLY 432
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
K + EA E + +M E++ P V I G C + V++ V +M+ +G P +
Sbjct: 433 KKNMWDEALEFLMKM--EKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNI 489
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 142/320 (44%), Gaps = 12/320 (3%)
Query: 48 YKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
YK D ++ +L+ F L I V + +RK PN Y ++I+ + F
Sbjct: 307 YKGGLVDVVAYNTLLRGFCRL-GKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMF 365
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPS--VKT 165
D D+ +K + + D + + ++ GRI + ++ L M +
Sbjct: 366 DMALDMFNDMKTDGISWNFDTYDTLIKGLF--FGGRIEEGLKILELMEESKGGSGGRISP 423
Query: 166 FNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP 225
+N VL L ++ E KL L IL G CE G ++ A V D+
Sbjct: 424 YNSVLYGLYKKNMWDEALEFLMKMEKLFPRAVDRSLRIL--GFCEKGAVKNAKMVFDQMI 481
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
+ PN+ Y L+HG C++GN+ EAF L+ M G FN LI G QGK E
Sbjct: 482 NEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDE 541
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
+KLL+ M G+GC P+ +Y ++ L K F +A + +MI + ++P ++ L+
Sbjct: 542 SALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLL 601
Query: 346 HGLCNQKLVEDVDWVLKKMV 365
+L +++ W+ K V
Sbjct: 602 -----IRLSKEIIWLENKNV 616
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 5/285 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ +++ Y +I KL RFD + ++ + + F VI+ G A I
Sbjct: 68 FTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGR-ARMIPH 126
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
I+ L + + PS+K FN +L++LV + + GV+ D IL+K
Sbjct: 127 VIKVLDLISKFGKNPSLKIFNSILDVLVKVDIDVAREFYRKQMMGSGVQGDDYTFAILMK 186
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC + F +L + +PN Y+TL+H LC+ G V A L++ +E +
Sbjct: 187 GLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIE----EP 242
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ VTFN+LI+ K+ + + + LLE+ G P+ + +V+ L + R EA E++
Sbjct: 243 NDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEML 302
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
R+ + V+Y L+ G C ++ LK+M ++G +P
Sbjct: 303 ERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLP 347
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 142/339 (41%), Gaps = 37/339 (10%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL + S + P+ T ++ L A R ++++R VE D YN +
Sbjct: 265 VLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLER--VEYKGGLVDVVAYNTLLR 322
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G+I A L +M C P+V+T+N++++ + ++ ++ G+
Sbjct: 323 GFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISW 382
Query: 197 DACCLNILLKGLCENGNLEAAFYVLD--EFPKQNCEPNVRTYSTLMHGL----------- 243
+ + L+KGL G +E +L+ E K + Y+++++GL
Sbjct: 383 NFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALE 442
Query: 244 ----------------------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
CEKG V+ A + ++M +EG + + ++ L+ G ++
Sbjct: 443 FLMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQE 502
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G + E +L+ M G G + ++ + +++G + + A +L+ M+ P +Y
Sbjct: 503 GNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTY 562
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LI LC + + + +M+++G P W ++
Sbjct: 563 SPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLL 601
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 163/309 (52%), Gaps = 15/309 (4%)
Query: 68 LRDPISVISVLNQYSKRKDYN-PNEALYTLII-NKLAQAKRFDAIEDIMQRIKVEKLCRF 125
LR+ + +++++ + D + N A+Y L+ NKL +A RF ++R+KV +
Sbjct: 248 LRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRF------LERMKVAGI--E 299
Query: 126 SDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
D YN +IK Y ++ RI A+E + +MP C P ++ V+ L + E++
Sbjct: 300 PDIVSYNCLIKGYCDVH-RIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKR 358
Query: 185 IYTSAAKLGVEI-DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ + + I D N L+ L ++G+ + A L E ++ + YS ++
Sbjct: 359 LMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSF 418
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C+ N+++A L+ M S+G + D VT+ +I G + GK++E K+L++M GC PN+
Sbjct: 419 CKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNT 478
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLK 362
+Y +L GL + EA+E++ +P+ ++Y ++HGL + KL E D + +
Sbjct: 479 VTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACD-LTR 537
Query: 363 KMVQQGFVP 371
+M+++GF+P
Sbjct: 538 EMIEKGFLP 546
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 35/259 (13%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I KA + DM S C P V T+ +++ E + + K G + + +
Sbjct: 424 IDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTV 483
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC NG A +++ + PN TYS +MHGL +G + EA L M +G
Sbjct: 484 LLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKG 543
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL-----LD--- 315
+ V N+LI L + V K LE KGC N ++ V+YG LD
Sbjct: 544 FLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAAL 603
Query: 316 ---------------------------KKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
K R EA EL+ +M+ + + P+ V+Y+ +IH
Sbjct: 604 SMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRF 663
Query: 349 CNQKLVEDVDWVLKKMVQQ 367
C V+D+ +L+KM+ +
Sbjct: 664 CQWGRVDDMMKLLEKMIAR 682
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 141/293 (48%), Gaps = 8/293 (2%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
V++ YSK NP+ YT II+ + + D + ++Q++ + C+ + Y V+ +
Sbjct: 431 VIDMYSK--GCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM-YKHGCK-PNTVTYTVL-L 485
Query: 137 YGNMAGRISKAIETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
G S + ++ + W P+ T++ V++ L E + + G
Sbjct: 486 NGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFL 545
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+ +N+L++ LC N N+ A L+E + C NV ++++++G C+ G+++ A +
Sbjct: 546 PNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSM 605
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
LE M D +T+ L L K+ +++E +L+ +M GKG P +Y+ V++
Sbjct: 606 LEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQ 665
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
R + +L+ +MI + P Y ++I LC E+ + +L K+++
Sbjct: 666 WGRVDDMMKLLEKMIARQ--PFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTA 716
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
+L++L +L + I + G+E + ++ G L A +L K
Sbjct: 203 MLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAG 262
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
EP++ +T ++ L + +E+A LERM+ GI+ D V++N LI G ++++ +
Sbjct: 263 VEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDAL 322
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI-CERMSPSFVSYKKLIHG 347
+L+ M KGC P+ SY V+ L ++ E K L+ M+ + P V+Y LI+
Sbjct: 323 ELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYA 382
Query: 348 LCNQKLVEDVDWVLKKMVQQGF 369
L +D L++ ++GF
Sbjct: 383 LSKHGHADDALVFLREAEEKGF 404
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 36/246 (14%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S + F+ V+ A + I T K GVE D N + L + LE A L
Sbjct: 231 SPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFL 290
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
+ EP++ +Y+ L+ G C+ +++A L+ M +G D V++ +++ L K
Sbjct: 291 ERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKD 350
Query: 282 GKVEEGMKLLERM-KGKGCYPNSASYQEVLYGL----------------------LDK-- 316
KVEE +L+E M + P+ +Y ++Y L +DK
Sbjct: 351 RKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVG 410
Query: 317 -----------KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
K +AK LV M + +P V+Y +I G C +++ +L++M
Sbjct: 411 YSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMY 470
Query: 366 QQGFVP 371
+ G P
Sbjct: 471 KHGCKP 476
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
DA +L L + + A +L ++ E + +S +M G + A +L
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRIL 255
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M+ G++ D N I L K K+E+ ++ LERMK G P+ SY ++ G D
Sbjct: 256 TLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDV 315
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
R +A EL+ M + P VSY ++ LC + VE+V +++ MVQ
Sbjct: 316 HRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQ 365
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%)
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y T++ L + + A +L M GI+ F+ ++ + G + +++L M
Sbjct: 199 VYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLM 258
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+ G P+ + +Y L+ + +A + RM + P VSY LI G C+ +
Sbjct: 259 QKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRI 318
Query: 355 EDVDWVLKKMVQQGFVP 371
+D ++ +M +G P
Sbjct: 319 DDALELIAEMPFKGCPP 335
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 97/246 (39%), Gaps = 4/246 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + PN L+I L + + + ++ + K C + F +VI + + G +
Sbjct: 542 KGFLPNPVDINLLIQSLCRNQNVVGAKKYLEEC-LHKGCAVNVVNFTSVIYGFCQI-GDL 599
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+ L DM N P T+ + + L E + G++ +
Sbjct: 600 DAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAV 659
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ C+ G ++ +L++ + +P Y+ ++ LC GN EEA LL ++
Sbjct: 660 IHRFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTAS 717
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D T +ILI G K+ +M + P+ ++V L+ EA +
Sbjct: 718 KLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADD 777
Query: 325 LVGRMI 330
L+ R +
Sbjct: 778 LMLRFV 783
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 10/256 (3%)
Query: 141 AGRISKAIETLFDMPSYNC---------WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+G I+ +E+ F + C W T VL L+ K + + G Y +
Sbjct: 62 SGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILE 121
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E
Sbjct: 122 CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDE 181
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
F L M + G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++
Sbjct: 182 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLID 241
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G R A E+ RM+ + + P ++Y LI+GLC + ++ ++ +M +G P
Sbjct: 242 GRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKP 301
Query: 372 RMGMWREIV-GCVTFG 386
+ ++ GC G
Sbjct: 302 DKFTYTTLIDGCCKEG 317
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 132/255 (51%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 129 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 185
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 186 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCK 245
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + +RM S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 246 NGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 305
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 306 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 365
Query: 366 QQGFVPRMGMWREIV 380
P G + I+
Sbjct: 366 SVDLKPDTGTYTMII 380
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 108/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 196 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEI 255
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D T+ LI G K
Sbjct: 256 YKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 315
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 316 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGT 375
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G P
Sbjct: 376 YTMIINEFCKKGDVWKGSKLLKEMQRDGHAP 406
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 195 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL--IPNGVTFTTLIDGRCKNGRVDLA 252
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 253 MEIYKRMLSQSLLPDLITYN-----------------------------------TLIYG 277
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ A ++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 278 LCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 337
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M P++ +Y ++ K + +L+
Sbjct: 338 DVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLK 397
Query: 328 RMICERMSPSFVSYKKLIHG 347
M + +PS V+Y L++G
Sbjct: 398 EMQRDGHAPSVVTYNVLMNG 417
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 166/339 (48%), Gaps = 41/339 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P+ +YT II+ + K D+ + V+K+ + + +N + IYG + G++ +A
Sbjct: 192 PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKI--YPNVVTFNSL-IYGFCIVGQLKEA 248
Query: 148 IETLFDMPSYNCWPSVKTFNL----------------VLNLLVS---------------- 175
+ L +M N P+V TFN+ VL++++
Sbjct: 249 VGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDG 308
Query: 176 ---AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
K + + ++ + + GV + ++++ GLC+N ++ A + E +N PN
Sbjct: 309 YFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPN 368
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TYS+L+ GLC+ G + + + L++ + + G A+ +T+N L++GL K +V++ + LL
Sbjct: 369 TVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLT 428
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+MK +G P+ ++Y ++ GL R +A+ + ++C+ + Y +I+GLC +
Sbjct: 429 KMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEG 488
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRN 391
++ +L +M G +P + ++ + K+N+N
Sbjct: 489 FFDEALSLLSQMEDNGCMPDAVTYETLISALF--KNNKN 525
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 1/221 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + TFN+++N + KLG + D +N LL+GLC NG ++ A
Sbjct: 86 PEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNF 145
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-IDADTVTFNILISGLR 279
D ++ + +Y TL++GLC+ G A LL ++E + D + + +I
Sbjct: 146 HDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFC 205
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K V + L M K YPN ++ ++YG + EA L+ M ++P+
Sbjct: 206 KDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVY 265
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ LI GLC + V+ VL M++QG P + + ++
Sbjct: 266 TFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLM 306
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 135/289 (46%), Gaps = 34/289 (11%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKL---AQAKRFDAIEDIMQRIKVE----KLCRFSD 127
+ +LN+ S + NPN + ++I+ L + K+ ++ +M + VE D
Sbjct: 249 VGLLNEMS-LNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMD 307
Query: 128 GFF-----------YNVIKIYGNMAG---------------RISKAIETLFDMPSYNCWP 161
G+F +N I + G + +A++ +M N P
Sbjct: 308 GYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTP 367
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
+ T++ +++ L + ++ + G + N LL GLC+N ++ A +L
Sbjct: 368 NTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALL 427
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
+ + +P++ TY+TL+ GLC+ G +++A + + + +G + + ++I+GL K+
Sbjct: 428 TKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKE 487
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
G +E + LL +M+ GC P++ +Y+ ++ L + +A +L+ MI
Sbjct: 488 GFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMI 536
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 3/256 (1%)
Query: 123 CRFSDG-FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYG 180
CR+ +F+N++ G I A +++FD + + PSV +FN ++N +
Sbjct: 130 CRYPASLYFFNILMDRFCKEGEIRLA-QSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E + ++ GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLI 248
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
G C+ G ++ A + ++M S+G D +T+N LI GL K+G + + L + M KG
Sbjct: 249 DGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLK 308
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P+ +Y ++ G + A E RMI E + VSY LI GLC + D + +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKM 368
Query: 361 LKKMVQQGFVPRMGMW 376
L++M+ G P G +
Sbjct: 369 LREMLSVGLKPDTGTY 384
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE W T VL L+ K + + Y +
Sbjct: 79 SGFLRDAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFYKEILECRYPASLYF 138
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C+ G + A V D K P+V +++TLM+G + G+++E F L M
Sbjct: 139 FNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMH 198
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K++E KL + M +G PN ++ ++ G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLD 258
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A E+ +M+ + SP ++Y LI+GLC + + + +M +G P
Sbjct: 259 LAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKP 309
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 109/218 (50%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P V T+++++N L E ++ G+ + L+ G C+NG
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGK 256
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A + + Q P+ TY+TL++GLC+KG++ +A L + M +G+ D +T+
Sbjct: 257 LDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTT 316
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+G +E + +RM + + SY ++ GL + R +A++++ M+
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVG 376
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P +Y ++H C V+ +LK+M + G VP
Sbjct: 377 LKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVP 414
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 2/214 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D + + L +G + + G++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGL--VPNGVTFTTLIDGHCKNGKLDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S P T+N ++ L + + + + G++ D L+ G
Sbjct: 261 MEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + +Y+ L+ GLC++G +A +L M S G+ D
Sbjct: 321 SCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPD 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
T T+ I++ K G V+ G KLL+ M+ G P
Sbjct: 381 TGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVP 414
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W + T VL L+ K + + G Y + G
Sbjct: 77 SGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYF 136
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL++ C+ G++ A VL+ K P+V +++TL++G G+++E F L M
Sbjct: 137 FNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMH 196
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 197 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVD 256
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 257 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLI 316
Query: 381 -GCVTFG 386
GC G
Sbjct: 317 DGCCKEG 323
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 123/246 (50%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+F+N++ G I A L + + PSV +FN ++N + E + ++
Sbjct: 135 YFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSA 194
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 195 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGR 254
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V+ A + ++M S+ + D +T+N LI GL K+G++++ L++ M +G P+ +Y
Sbjct: 255 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTT 314
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + A E RMI E + V Y LI GLC + D + +L++M+ G
Sbjct: 315 LIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVG 374
Query: 369 FVPRMG 374
P G
Sbjct: 375 LKPNTG 380
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 10/256 (3%)
Query: 141 AGRISKAIETLFDMPSYNC---------WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+G I+ +E+ F + C W T VL L+ K + + G Y +
Sbjct: 72 SGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKXILE 131
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E
Sbjct: 132 CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDE 191
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
F L M + G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++
Sbjct: 192 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 251
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G R A E+ RM+ + + P ++Y LI+GLC + ++ ++ +M +G P
Sbjct: 252 GHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKP 311
Query: 372 RMGMWREIV-GCVTFG 386
+ ++ GC G
Sbjct: 312 DKITYTTLIDGCCKEG 327
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + E + +
Sbjct: 139 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 197
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 198 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 257
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + +RM S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 258 RVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYT 317
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 318 TLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 377
Query: 368 GFVPRMGMWREIV 380
G P + I+
Sbjct: 378 GLKPNXRTYTMII 390
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 111/211 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 206 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 265
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G K
Sbjct: 266 YKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCK 325
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P+ +
Sbjct: 326 EGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRT 385
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 386 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 416
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 205 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL--VPNGVTFTTLIDGHCKNGRVDLA 262
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 263 MEIYKRMLSQSLLPDLITYN-----------------------------------TLIYG 287
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ A +++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 288 LCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLD 347
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G PN +Y ++ K + +L+
Sbjct: 348 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLK 407
Query: 328 RMICERMSPSFVSYKKLIHG 347
M + PS V+Y L++G
Sbjct: 408 EMQRDGHVPSVVTYNVLMNG 427
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 132/260 (50%), Gaps = 2/260 (0%)
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL-YG 180
LC + F V+K Y ++ I KA+ + ++ P V ++N VL+ + +K
Sbjct: 129 LCYSTSSVFDLVVKSYSRLS-LIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNIS 187
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ ++ + V + NIL++G C GN++ A + D+ + C PNV TY+TL+
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
G C+ +++ F LL M +G++ + +++N++I+GL ++G+++E +L M +G
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
+ +Y ++ G + F +A + M+ ++PS ++Y LIH +C +
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 361 LKKMVQQGFVPRMGMWREIV 380
L +M +G P + +V
Sbjct: 368 LDQMRVRGLCPNERTYTTLV 387
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 136/293 (46%), Gaps = 2/293 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y ++I A D + +++ K C + + +I Y + +I
Sbjct: 202 SPNVFTYNILIRGFCFAGNIDVALTLFDKMET-KGCLPNVVTYNTLIDGYCKLR-KIDDG 259
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M P++ ++N+V+N L E+ + T + G +D N L+KG
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ GN A + E + P+V TY++L+H +C+ GN+ A L++M G+ +
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+ L+ G ++G + E ++L M G P+ +Y ++ G + +A ++
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + +SP VSY ++ G C V++ V ++MV++G P + ++
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 33/311 (10%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC-------RFSDGFFYNVIKI 136
R P+ YT +I+ + +A + + + +++V LC DGF
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF------- 390
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVE 195
+ G +++A L +M PSV T+N ++N V+ K+ I + + G+
Sbjct: 391 --SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI-AVLEDMKEKGLS 447
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D + +L G C + +++ A V E ++ +P+ TYS+L+ G CE+ +EA L
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
E M G+ D T+ LI+ +G +E+ ++L M KG P+ +Y ++ GL
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIH---------------GLCNQKLVEDVDWV 360
+ R EAK L+ ++ E PS V+Y LI G C + ++ + D V
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 361 LKKMVQQGFVP 371
+ M+ + P
Sbjct: 628 FESMLGKNHKP 638
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 142/309 (45%), Gaps = 6/309 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGR 143
K PN Y ++IN L + R + ++ + D YN +IK Y G
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL--DEVTYNTLIKGYCK-EGN 325
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A+ +M + PSV T+ +++ + A G+ +
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G + G + A+ VL E P+V TY+ L++G C G +E+A +LE M+ +G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D V+++ ++SG + V+E +++ M KG P++ +Y ++ G +++R EA
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+L M+ + P +Y LI+ C + +E + +MV++G +P + + ++
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN-- 563
Query: 384 TFGKDNRNR 392
K +R R
Sbjct: 564 GLNKQSRTR 572
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 24/251 (9%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D +S + VL F D + V + + K P+ Y+ +I + +R D+
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVE-KGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 114 MQRIKVEKLCRFS---DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
E++ R D F Y + M G + KA++ +M P V T+++++
Sbjct: 508 Y-----EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 171 NLLVSAKLYGE-----IQGIYTSAAKLGVEIDAC---CLNI-------LLKGLCENGNLE 215
N L E ++ Y + V C NI L+KG C G +
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A V + +N +P+ Y+ ++HG C G++ +A+ L + M G TVT L+
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Query: 276 SGLRKQGKVEE 286
L K+GKV E
Sbjct: 683 KALHKEGKVNE 693
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 134/378 (35%), Gaps = 107/378 (28%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGN-MAGR 143
PNE YT +++ +Q + +++ + +GF +V+ I G+ + G+
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMN-------DNGFSPSVVTYNALINGHCVTGK 430
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE---------------------- 181
+ AI L DM P V +++ VL+ + E
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 182 -IQG------------IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
IQG +Y ++G+ D L+ C G+LE A + +E ++
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 229 CEPNVRTYSTLMHGL--------------------------------------------- 243
P+V TYS L++GL
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 244 -----CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
C KG + EA + E M + D +NI+I G + G + + L + M G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMI--CERMSPSFVSYKKLI---HGLCNQKL 353
++ + ++ L + + E ++ ++ CE K L+ H N +
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE--QAKVLVEINHREGNMDV 728
Query: 354 VEDVDWVLKKMVQQGFVP 371
V D VL +M + GF+P
Sbjct: 729 VLD---VLAEMAKDGFLP 743
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 1/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +++ ++A RF + +R+ V+ + + + V+ +Y MA + +
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRM-VDSGVQPAIVTYNVVLHVYSKMAVPWKEVV 228
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E + M + P T+N +++ LY E ++ G E D N LL
Sbjct: 229 ELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 288
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ + A V+ E + C P+V TY++L+ + G +E+A L + ME +GI D
Sbjct: 289 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDV 348
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ LISGL + GK++ + + M GC PN +Y ++ + +FPE +
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P V++ L+ L +V V K+M + G++P + ++
Sbjct: 409 LRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLI 460
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 149/363 (41%), Gaps = 68/363 (18%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
VL ++S + P + L K P+ Y +I+ + + + +K
Sbjct: 213 VLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMK-- 270
Query: 121 KLCRFSDGF------FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ GF F +++ +YG A R +AIE + +M C PSV T+N +++ V
Sbjct: 271 -----ASGFEPDKVTFNSLLDVYGK-ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYV 324
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
L + + G++ D L+ GL G ++AA DE + C+PN+
Sbjct: 325 KDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 384
Query: 235 TYSTL--MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL------------ISG--- 277
TY+ L MHG+ +G E + + + S G D VT+N L +SG
Sbjct: 385 TYNALIKMHGV--RGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFK 442
Query: 278 -LRKQGKVEE-------------------GMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
++K G + E M++ +RM G YP+ ++Y VL L
Sbjct: 443 EMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGG 502
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK-------LVEDV--------DWVLK 362
R+ +A++L M P SY L+H N K L +D+ +W++K
Sbjct: 503 RWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVK 562
Query: 363 KMV 365
+V
Sbjct: 563 TLV 565
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 111/247 (44%), Gaps = 2/247 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ +D P+E Y+ +++ A AKR D ++ + I E++ + + + +
Sbjct: 515 EERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERI--EPHNWLVKTLVLVNSKVN 572
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+++A + ++ C + N ++++ ++ +++ I + + + + A N
Sbjct: 573 NLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYN 632
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G+ E +L E P+ +Y+T+++ KG ++EA L M+
Sbjct: 633 SLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS 692
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D VT+NI + EE ++L+ M +GC PN +Y ++ G + +A
Sbjct: 693 GLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 752
Query: 323 KELVGRM 329
K V +
Sbjct: 753 KIFVSNL 759
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 126/300 (42%), Gaps = 5/300 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ +L ++ R I V+ Q +R P+ Y +I+ + + +
Sbjct: 277 DKVTFNSLLDVYGKARRHDEAIEVI-QEMERVGCPPSVVTYNSLISSYVKDGLLEQAVAL 335
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
Q ++V+ + D Y + + AG+I AI +M C P++ T+N ++ +
Sbjct: 336 KQEMEVKGIK--PDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMH 393
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ E+ ++ G D N LL +NG V E K P
Sbjct: 394 GVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 453
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY +L+ G + A + +RM GI D T+N ++S L + G+ E+ KL
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 513
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M+ + C P+ SY +L+ + KR + K L + ER+ P K L+ L N K+
Sbjct: 514 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLV--LVNSKV 571
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 129/315 (40%), Gaps = 3/315 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+ Y P Y +I+ ++ FD I +R+ + + D YN + G
Sbjct: 445 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGI--YPDVSTYNAVLSALARGG 502
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R +A + +M +C P +++ +L+ +AK +++ + +E +
Sbjct: 503 RWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVK 562
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ + NL A E ++ C ++ + ++ + V + +L M+
Sbjct: 563 TLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES 622
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
I+ T+N L+ + G E+ +L +K G P+ SY V+Y K + EA
Sbjct: 623 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 682
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-G 381
L M C + P V+Y + + + E+ +++ MV QG P + IV G
Sbjct: 683 SRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEG 742
Query: 382 CVTFGKDNRNRVYVT 396
GK +++V+
Sbjct: 743 YCRNGKLTDAKIFVS 757
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 127/285 (44%), Gaps = 16/285 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + Y +++ LA+ R++ E + ++ E+ C+ + + +++ Y N A R+ K
Sbjct: 486 PDVSTYNAVLSALARGGRWEQAEKLFAEME-ERDCKPDEYSYSSLLHAYAN-AKRLDKMK 543
Query: 149 ETLFDMPSYNCWPS---VKTFNLVL----NLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
D+ S P VKT LV NL + K + E++ S +D L
Sbjct: 544 ALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCS-------LDINVL 596
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ +N + +L + + TY++LMH G+ E+ +L ++S
Sbjct: 597 NAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKS 656
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D ++N +I ++G+++E +L MK G P+ +Y + + F E
Sbjct: 657 SGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEE 716
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
A ELV M+ + P+ +Y ++ G C + D + + Q
Sbjct: 717 AIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 761
>gi|293334061|ref|NP_001169447.1| uncharacterized protein LOC100383318 [Zea mays]
gi|224029437|gb|ACN33794.1| unknown [Zea mays]
gi|414869277|tpg|DAA47834.1| TPA: hypothetical protein ZEAMMB73_389575 [Zea mays]
Length = 459
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 151/330 (45%), Gaps = 4/330 (1%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
VL + RDP + + + + N + + +LA A+R D +E+I+++ K
Sbjct: 96 VLVRIKHERDPERLYQLFRANAHNRLLVENRFAFEDAVARLAGARRNDLVEEILEQHKAL 155
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
R +GF +I +YG AG A+ T +M Y C + K+ N + +L+ A+++
Sbjct: 156 PQGR-REGFVVRIIGLYGK-AGMPGHALRTFQEMGMYGCPRTAKSLNATMKVLLRARMFD 213
Query: 181 EIQGIYTSAA-KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
E ++ K VE+D N ++K C+ G+L AA+ V+ + P+V TY+TL
Sbjct: 214 EALSLFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYQVMQGMERAGVRPDVITYTTL 273
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
M + G E GL M G T+N+ I L +G+ + +L +M G
Sbjct: 274 MAAFYKCGRREVGDGLWNLMRLRGCVPTLATYNVRIQFLVNRGRGWQANELARKMYVAGI 333
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P+ +Y ++ G AK + G M P+ Y+ ++H LC ++ +
Sbjct: 334 KPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFDLAFR 393
Query: 360 VLKKMVQQGFVPRMGMWREIV-GCVTFGKD 388
+ K +++ + P + +++ G + KD
Sbjct: 394 LCKDSMEKNWFPSVDTINQLLKGLMAISKD 423
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 38/244 (15%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D +S V+K+F ++ D + V+ Q +R P+ YT ++ + R +
Sbjct: 231 DDISCNTVVKMFCDMGDLRAAYQVM-QGMERAGVRPDVITYTTLMAAFYKCGRREV---- 285
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
DG +N++++ G C P++ T+N+ + L
Sbjct: 286 ------------GDGL-WNLMRLRG--------------------CVPTLATYNVRIQFL 312
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
V+ + + G++ D N+++KG G E A V + C+PN
Sbjct: 313 VNRGRGWQANELARKMYVAGIKPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNS 372
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+ Y T++H LCE+ + + AF L + + T N L+ GL K G ++++
Sbjct: 373 KVYQTMVHYLCERRDFDLAFRLCKDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKL 432
Query: 294 MKGK 297
+ G+
Sbjct: 433 VTGR 436
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 141/316 (44%), Gaps = 39/316 (12%)
Query: 88 NPNEALYTLIINKLA-QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------ 140
PN Y +I++ L + K FDA +VE R G + Y ++
Sbjct: 348 QPNSYTYNIIVSGLCKEGKAFDAR-------RVENFIR--SGVMSPDVVTYTSLLHAYCS 398
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G I+ A L +M C P+ T+N++L L A E + + + G +D
Sbjct: 399 KGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAG 458
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPK-----------------------QNCEPNVRTYS 237
NI++ GLC N L+ A ++D + Q C P+ TYS
Sbjct: 459 CNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYS 518
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
L+ LC++G +EA L M + I D+V ++ I G K GK +K+L M+ K
Sbjct: 519 ILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKK 578
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
GC P++ +Y ++ G +K + E +L+ M + +SP+ ++Y LI C Q +V
Sbjct: 579 GCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKA 638
Query: 358 DWVLKKMVQQGFVPRM 373
+L +M+Q VP +
Sbjct: 639 MPLLDEMLQNELVPNI 654
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 127/288 (44%), Gaps = 14/288 (4%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ L++ L A R + + + + + F + ++ AGR A
Sbjct: 142 QPDVFTRNLLLQALCDAGRMELAQRVFDAMPAR------NEFSFGILARGYCRAGRSIDA 195
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ L MPS N + N V+ L E + + G+ + N +
Sbjct: 196 LKVLDGMPSMN----LVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISA 251
Query: 208 LCENGNLEAAFYVL----DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LC+ G + A+ + +++ P+ T+ ++ G C+ G V+EA L++ M G
Sbjct: 252 LCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGG 311
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
++N +SGL + G+V E +LL M +G PNS +Y ++ GL + + +A+
Sbjct: 312 FLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDAR 371
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + MSP V+Y L+H C++ + + +L +M Q+G P
Sbjct: 372 RVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAP 419
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 152/371 (40%), Gaps = 60/371 (16%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ T +L + + + + +L++ ++ K PN Y +++ L +A R E +
Sbjct: 385 DVVTYTSLLHAYCSKGNIAAANRILDEMAQ-KGCAPNSFTYNVLLQSLWRAGRTTEAERL 443
Query: 114 MQR--------------IKVEKLCRFS---------DGFFYNVIKIYGNMAGRISKAIET 150
++R I ++ LCR S DG + G + +
Sbjct: 444 LERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSD 503
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
S C P T++++++ L + E + + D+ + + G C+
Sbjct: 504 --SSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCK 561
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
+G A VL + K+ C P+ RTY+ L+ G EK EE L+ M+ +GI + +T
Sbjct: 562 HGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMT 621
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY------------------------ 306
+N LI +QG V + M LL+ M PN S+
Sbjct: 622 YNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAAL 681
Query: 307 -----QEVLYGLLDKK-----RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+EVLY L+ + ++ EAK ++ + R+S YK++I GLC V+
Sbjct: 682 RTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDH 741
Query: 357 VDWVLKKMVQQ 367
+LK ++ +
Sbjct: 742 AHSLLKLLIAK 752
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 33/243 (13%)
Query: 161 PSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P+ +N L+L L ++L ++ +Y G + D N+LL+ LC+ G +E A
Sbjct: 108 PTTPVYNRLILAALRESRL-DLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQR 166
Query: 220 VLDEFPKQN-----------CEP----------------NVRTYSTLMHGLCEKGNVEEA 252
V D P +N C N+ +T++ G C++G VEEA
Sbjct: 167 VFDAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEA 226
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY----PNSASYQE 308
L+ERM +G+ + VTFN IS L K G+V + ++ + M+ + P+ ++
Sbjct: 227 ERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDV 286
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+L G D EA+ LV M C SY + + GL V + +L++M +G
Sbjct: 287 MLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEG 346
Query: 369 FVP 371
P
Sbjct: 347 IQP 349
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 49/293 (16%)
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-----AGRISKAIETLFDMPSYNCW----- 160
E +++R++V+ G NV+ + AGR+ A DM W
Sbjct: 227 ERLVERMRVQ-------GLAPNVVTFNARISALCKAGRVLDAYRIFQDMQED--WQHGLP 277
Query: 161 -PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC--------CLNILLKGLCEN 211
P TF+++L+ A E A++ V+I C N L GL N
Sbjct: 278 RPDQVTFDVMLSGFCDAGFVDE--------ARVLVDIMRCGGFLRRVESYNRWLSGLVRN 329
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G + A +L E + +PN TY+ ++ GLC++G +A + + S + D VT+
Sbjct: 330 GRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTY 389
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
L+ +G + ++L+ M KGC PNS +Y +L L R EA+ L+ RM
Sbjct: 390 TSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNE 449
Query: 332 ERMSPSFVSYKKLIHGLC-NQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ S +I GLC N +L +D V GMW E G +
Sbjct: 450 KGYSLDTAGCNIIIDGLCRNSRLDVAMDIV------------DGMWEEGSGAL 490
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 8/215 (3%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
I VL K K NP+ Y L+I + + + I +M +K EK + + ++
Sbjct: 568 AIKVLRDMEK-KGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMK-EKGISPNVMTYNSL 625
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL- 192
IK + G ++KA+ L +M P++ +F+L++ + Q ++ +A +
Sbjct: 626 IKSFCQQ-GMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTC 684
Query: 193 -GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
E+ C ++ L G A +L+ + Y ++ GLCE G V+
Sbjct: 685 GQKEVLYC---LMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDH 741
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
A LL+ + ++ D F +I L +GK ++
Sbjct: 742 AHSLLKLLIAKRHLFDPAAFMPVIDALGDRGKKQD 776
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 120/262 (45%), Gaps = 38/262 (14%)
Query: 154 MPSYNCWPSVKTFNLVLNLL--VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
M S+ P++ T ++++N ++ GE ++ G D L+ GLC+
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 146
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD---- 267
GN AA +L ++NC+PNV Y+T++ LC+ V EAF L M ++GI D
Sbjct: 147 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 206
Query: 268 -------------------------------TVTFNILISGLRKQGKVEEGMKLLERMKG 296
V+FN ++ L K+GKV E ++++M
Sbjct: 207 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 266
Query: 297 KG-CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+G C PN SY ++ G +R +A L G M + + P V+Y LIHGLC+ + ++
Sbjct: 267 RGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 326
Query: 356 DVDWVLKKMVQQGFVPRMGMWR 377
D + +MV +P + +R
Sbjct: 327 DAIALFHEMVACSQIPNLVTYR 348
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 2/227 (0%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I AI + M PS FN +L + K + + + G+ + L+I
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 204 LLKGLCE--NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ C G + A ++ D+ + P+V TY TL++GLC+ GN A LL M
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + +N +I L K +V E L M KG P+ +Y +++ L + +
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
L+ M+ ++ P VS+ ++ LC + V + V+ KM+Q+G
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG 268
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Query: 231 PNVRTYSTLMHGLCE--KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
PN+ T L++ C +G + EA L ++M EG D VT+ LI+GL K G +
Sbjct: 94 PNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAI 153
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+LL M K C PN +Y ++ L ++ EA L M+ + +SP +Y LIH L
Sbjct: 154 RLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHAL 213
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
CN + V +L +MV +P + + +V
Sbjct: 214 CNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 245
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 7/288 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAG 142
+K+ PN Y II+ L + ++ ++ + + + D F YN +I N+
Sbjct: 161 QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS--PDIFTYNSLIHALCNLCE 218
Query: 143 RISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-VEIDACC 200
K + TL +M P V +FN V++ L E + + G +
Sbjct: 219 W--KHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVIS 276
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C+ ++ A Y+ E +Q P+ TYSTL+HGLC +++A L M
Sbjct: 277 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 336
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ + VT+ IL+ L K + E M LL+ ++G P+ + G+
Sbjct: 337 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 396
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A++L + + + P +Y +I+GLC + L+++ + ++M + G
Sbjct: 397 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 444
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 132/314 (42%), Gaps = 2/314 (0%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + ++ NL + V ++LN+ K P+ + +++ L + + D+
Sbjct: 202 DIFTYNSLIHALCNLCEWKHVATLLNEMVDSK-IMPDVVSFNTVVDALCKEGKVTEAHDV 260
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ ++ C + + +I Y + RI KA+ +M P T++ +++ L
Sbjct: 261 VDKMIQRGGCMPNVISYNTLINGYCKIQ-RIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 319
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ + ++ + ILL LC+N L A +L N +P++
Sbjct: 320 CHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDI 379
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+ + + G+C G +E A L + S+G+ D T++I+I+GL ++G ++E KL
Sbjct: 380 QVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFRE 439
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M GC N Y + G L A +L+ M+ S + + L + L
Sbjct: 440 MDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 499
Query: 354 VEDVDWVLKKMVQQ 367
+ + +L+ +Q
Sbjct: 500 DQSLKQILRDFCKQ 513
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 127/286 (44%), Gaps = 3/286 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ Y +IN L + A ++ + V+K C+ + F YN I ++++
Sbjct: 129 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSM-VQKNCQ-PNVFAYNTIIDSLCKDRQVTE 186
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A +M + P + T+N +++ L + + + + + D N ++
Sbjct: 187 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 246
Query: 207 GLCENGNLEAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC+ G + A V+D+ ++ C PNV +Y+TL++G C+ +++A L M + +
Sbjct: 247 ALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELI 306
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
DTVT++ LI GL ++++ + L M PN +Y+ +L L + EA L
Sbjct: 307 PDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMAL 366
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + + P I G+C +E + + +G P
Sbjct: 367 LKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 412
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
++ A RM TV FN L++ + K + L +M G PN +
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 309 VL--YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ + L++ + EA L +MI E P V+Y LI+GLC +L MVQ
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161
Query: 367 QGFVPRMGMWREIV 380
+ P + + I+
Sbjct: 162 KNCQPNVFAYNTII 175
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 143/313 (45%), Gaps = 39/313 (12%)
Query: 89 PNEALYTLIINKLA-QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------A 141
PN Y +I++ L + K FD +VE R G + Y ++
Sbjct: 347 PNSYTYNIIVDGLCKEGKAFDVR-------RVEDFVR--SGVMTPDVVTYTSLLHAYCSK 397
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A L +M C P++ T+N++L L+ A E++ + ++ G +D
Sbjct: 398 GNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASC 457
Query: 202 NILLKGLCENGNLEAAFYVLDEF-----------------------PKQNCEPNVRTYST 238
NI++ GLC N LE A ++D ++C P+ TYST
Sbjct: 458 NIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYST 517
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
LM+ LC++G +EA L M + I D+V ++ I G GK +K+L M+ +
Sbjct: 518 LMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRS 577
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C P++ SY +++G +K++ E +L+ M + +S + ++Y LI C + +V
Sbjct: 578 CNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAM 637
Query: 359 WVLKKMVQQGFVP 371
+L +M+Q VP
Sbjct: 638 PLLDEMLQNEIVP 650
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 159/376 (42%), Gaps = 66/376 (17%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ T +L + + + + +L++ ++ K PN Y +++ L +A R +E +
Sbjct: 383 DVVTYTSLLHAYCSKGNTTAANRILDEMAQ-KGCAPNLFTYNVLLQSLLKAGRTTEVERL 441
Query: 114 MQR--------------IKVEKLCRFS---------DGFFYNVIKIYGNMA-GRISKAIE 149
++R I ++ LCR S DG + G +A R+ +
Sbjct: 442 LERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNE-----GRLALRRLGNSFV 496
Query: 150 TLFDMPSYN--CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+L S + C P T++ ++N L + E + + D+ + + G
Sbjct: 497 SLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHG 556
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C +G A VL + K++C P+ R+Y+ L+ G EK +E L+ M+ +GI ++
Sbjct: 557 YCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSN 616
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY--------------------- 306
+T+N LI +G V + M LL+ M PN S+
Sbjct: 617 VMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFD 676
Query: 307 --------QEVLYGLLDKK-----RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+EVLY L+ + R+ EAK ++ + R+S YK++I GLC+
Sbjct: 677 VALSTCGQKEVLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSE 736
Query: 354 VEDVDWVLKKMVQQGF 369
+ +LK + +G+
Sbjct: 737 ADHAHSLLKLFIAKGY 752
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 122/275 (44%), Gaps = 18/275 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P +Y ++ + R D +E + + + + D F N + + AGR+ A
Sbjct: 106 PPTPVYNRLLLAALREDRLDLVEALYKDLLLAGAT--PDVFTRNALLEALSAAGRMDLAR 163
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV--EIDACCLNILLK 206
MP+ N + S + A+ Y + A L E++ N ++
Sbjct: 164 RVFDAMPARNEFSSG----------ILARGYCRAGRSADALAVLDAMPEMNLVVCNTVVA 213
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME---SEG 263
G C G ++ A ++D Q PNV T++ + LC+ G V EA+ + M+ +G
Sbjct: 214 GFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQG 273
Query: 264 ID-ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ D VTF++++SG G V+E L++ M+ G SY L GL+ R EA
Sbjct: 274 LPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEA 333
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
+EL+ M E + P+ +Y ++ GLC + DV
Sbjct: 334 QELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDV 368
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 126/302 (41%), Gaps = 49/302 (16%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-----AGRISKAIETL 151
++ + R D E ++ R++ + G NV+ G + AGR+ +A
Sbjct: 211 VVAGFCREGRVDEAERLVDRMRAQ-------GLAPNVVTFNGRISALCKAGRVLEAYRIF 263
Query: 152 FDMPSYNCW------PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC------ 199
DM W P TF+++L+ A + E A + V+I C
Sbjct: 264 NDM--QEAWEQGLPRPDQVTFDVMLSGFCDAGMVDE--------ATVLVDIMRCGGFLRK 313
Query: 200 --CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L GL +NG + A +L E + +PN TY+ ++ GLC++G + + +
Sbjct: 314 VESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVED 373
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+ S + D VT+ L+ +G ++L+ M KGC PN +Y +L LL
Sbjct: 374 FVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAG 433
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVDWVLKKMVQQGFVPRMGMW 376
R E + L+ RM + S S +I GLC N KL +D V GMW
Sbjct: 434 RTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIV------------DGMW 481
Query: 377 RE 378
E
Sbjct: 482 NE 483
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL +G C G A VLD P E N+ +T++ G C +G V+EA L++RM ++
Sbjct: 179 ILARGYCRAGRSADALAVLDAMP----EMNLVVCNTVVAGFCREGRVDEAERLVDRMRAQ 234
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMK---GKGC-YPNSASYQEVLYGLLDKKR 318
G+ + VTFN IS L K G+V E ++ M+ +G P+ ++ +L G D
Sbjct: 235 GLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGM 294
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA LV M C SY + + GL V + +L +M +G P
Sbjct: 295 VDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQP 347
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 126/295 (42%), Gaps = 5/295 (1%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
S +S+++ S K P+ Y+ ++N L + RFD + + + + + D Y+
Sbjct: 494 SFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDIS--PDSVIYD 551
Query: 133 VIKIYGN-MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
I+G M G+ S AI+ L DM +C PS +++NL++ + EI + + +
Sbjct: 552 TF-IHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKE 610
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ + N L+K C G + A +LDE + PNV ++ L+ C+ +
Sbjct: 611 KGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSA 670
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A + + S V + ++ + L + E +LE S Y+ ++
Sbjct: 671 AQRVFDVALST-CGQKEVLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIA 729
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
GL D A L+ I + S ++ +I L D D + +KM++
Sbjct: 730 GLCDVSEADHAHSLLKLFIAKGYSFDPATFMPVIDALSESGKKHDADMLSEKMME 784
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 136/346 (39%), Gaps = 74/346 (21%)
Query: 89 PNEALYTLIINKLAQAKRFD---AIEDIMQ----RIKVEKLCRFSDGFFYNVIKIYGNMA 141
P++ + ++++ A D + DIM+ KVE R+ G N
Sbjct: 277 PDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKN--------- 327
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ +A E L +M P+ T+N++++ L +++ + + D
Sbjct: 328 GRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTY 387
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH-------------------- 241
LL C GN AA +LDE ++ C PN+ TY+ L+
Sbjct: 388 TSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSE 447
Query: 242 ---------------GLCEKGNVEEAFGLLERMESEGIDA-------------------- 266
GLC +E A +++ M +EG A
Sbjct: 448 KGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKS 507
Query: 267 ---DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D +T++ L++ L K+G+ +E K L M GK P+S Y ++G + A
Sbjct: 508 CLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAI 567
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+++ M +PS SY LI G ++ +++ ++ +M ++G
Sbjct: 568 KVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGI 613
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 142/296 (47%), Gaps = 19/296 (6%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDG 128
D IS ++ + P+ Y +++ LA +K F +A++ + + IK+ K C F++
Sbjct: 104 DSISALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKDCSFNED 163
Query: 129 FFYNV-----------------IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
F + +K Y G I + T + C PSV + N +LN
Sbjct: 164 VFQTLLFCCQDCNWDPVIFDMLVKAYVR-EGMIKEGFTTFRKIVEVGCVPSVISCNCLLN 222
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L+ + +Y A++G+ ++ NIL C++G+++ L+ ++ EP
Sbjct: 223 GLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEP 282
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
++ TY+TL+ C KG +++AF L M + D V++ L++GL K+GKV E +L
Sbjct: 283 DIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLF 342
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
RM +G P+ S+ ++ G + + E++ L+ MI + P V+ + LI G
Sbjct: 343 HRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEG 398
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 124/290 (42%), Gaps = 8/290 (2%)
Query: 97 IINKLAQAKRFDAIEDI---MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
++N L + R D + M R+ + + + +N++ G + K + L
Sbjct: 220 LLNGLLKLNRIDQCWQVYKEMARVGIH-----PNSYTFNILTHVFCQDGDVDKVNDFLER 274
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P + T+N +++ + +Y + V D L+ GLC+ G
Sbjct: 275 MEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGK 334
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A + + P++ +++TL+ G C++G + E+ LL M GI D VT +
Sbjct: 335 VREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQV 394
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G RK+ ++ + L+ ++ G ++ Y ++ + ++ R AK L+ R+
Sbjct: 395 LIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRG 454
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
P Y KLI LC + D V +M + P ++ ++ C+
Sbjct: 455 YVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCL 504
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 116/297 (39%), Gaps = 2/297 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R++ P+ YT ++N L + + + R+ L D +N + G+
Sbjct: 312 RRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGL--NPDIVSFNTLICGYCKEGK 369
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ ++ L +M P T +++ + + GV I +
Sbjct: 370 MRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDY 429
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ +CE G AA +L ++ P V Y+ L+ LC+ ++ +A + M
Sbjct: 430 LMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRN 489
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I +T+ LI L + + E L+E M G P+ + +++ ++ +A+
Sbjct: 490 IKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAE 549
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ E SY L+ C + + +M++ GF P + +R+++
Sbjct: 550 TLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMI 606
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 74/172 (43%), Gaps = 19/172 (11%)
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMES-------------------EGIDADTVT 270
+P+++ Y L+H L +EA L + + + D V
Sbjct: 122 QPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQDCNWDPVI 181
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
F++L+ ++G ++EG ++ GC P+ S +L GLL R + ++ M
Sbjct: 182 FDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMA 241
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
+ P+ ++ L H C V+ V+ L++M ++GF P + + ++ C
Sbjct: 242 RVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISC 293
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 4/163 (2%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GVEI N L++ LC++ ++ A V E +N +P+ TY L+ LC EA
Sbjct: 458 GVEI----YNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEA 513
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L+E M G+ D L+ K+ + + LL+ + +S SY ++
Sbjct: 514 ESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKT 573
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+ EL RM+ +P+ +++++IHGL VE
Sbjct: 574 YCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGLWKAMAVE 616
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 67/153 (43%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V+ +N ++ L + + + + ++ A L+ LC A +
Sbjct: 457 PGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESL 516
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
++E + P+ LMH C++ ++ +A LL+ E D+ ++N L+ +
Sbjct: 517 MEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCE 576
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
M+L +RM G PN +++++++GL
Sbjct: 577 DADATRLMELQDRMLKVGFAPNIQTFRQMIHGL 609
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 14/206 (6%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AGRISK 146
+Y ++ + + R A + ++QRI S + ++IY + + I+
Sbjct: 426 IYDYLMVSICEEGRPFAAKSLLQRI--------SQRGYVPGVEIYNKLIESLCKSDSIAD 477
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ +M N PS T+ ++ L E + + + G+ D L+
Sbjct: 478 ALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMH 537
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
C+ ++ A +L F K+ + +Y+TL+ CE + L +RM G
Sbjct: 538 VYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAP 597
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLE 292
+ TF +I GL K VE+ LLE
Sbjct: 598 NIQTFRQMIHGLWKAMAVEKDKLLLE 623
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y G
Sbjct: 79 SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILDCGYPASLYF 138
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C+ G++ A V + K P+V +++TLM+G G+++E F L M
Sbjct: 139 FNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ L + M KG PN ++ ++ G +R
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVD 258
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 318
Query: 381 -GCVTFG 386
GC G
Sbjct: 319 DGCCKEG 325
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 124/252 (49%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+F+N++ G I A + + PSV +FN ++N + E + ++
Sbjct: 137 YFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSA 196
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRR 256
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 316
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + A E RMI E + V+Y LI GLC + D + VL++M+ G
Sbjct: 317 LIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVG 376
Query: 369 FVPRMGMWREIV 380
P G + I+
Sbjct: 377 LKPDTGTYTMII 388
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 114/218 (52%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P V T+++++N L + G++ G+ + L+ G C+N
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRR 256
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 316
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+G +E + +RM + + +Y ++ GL + R+ +A++++ M+
Sbjct: 317 LIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVG 376
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P +Y +I+ C + V +LK+M + G VP
Sbjct: 377 LKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 414
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P++
Sbjct: 323 KEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS VS
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 125/252 (49%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+F+N++ G I A + + PSV +FN ++N + E + ++
Sbjct: 126 YFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSA 185
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGR 245
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 246 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 305
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + A E RMI E + V+Y LI GLC + D + VL++M+ G
Sbjct: 306 LIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAG 365
Query: 369 FVPRMGMWREIV 380
P G + I+
Sbjct: 366 LKPDTGTYTMII 377
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL ++ K + + G Y + G
Sbjct: 68 SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECGYPASLYF 127
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C+ G++ A V + K P+V +++TLM+G G+++E F L M
Sbjct: 128 FNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 187
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVD 247
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 307
Query: 381 -GCVTFG 386
GC G
Sbjct: 308 DGCCKEG 314
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 114/218 (52%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P V T+++++N L + ++ G+ + L+ G C++G
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGR 245
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+
Sbjct: 246 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 305
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+G +E + +RM + + +Y ++ GL + R+ +A++++ M+
Sbjct: 306 LIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAG 365
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P +Y +I+ C + V +LK+M + G VP
Sbjct: 366 LKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 403
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 252 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCC 311
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P++
Sbjct: 312 KEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTG 371
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+Y ++ K +L+ M + PS V+Y L++G
Sbjct: 372 TYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 137/313 (43%), Gaps = 25/313 (7%)
Query: 56 LSPTEVLKIFSNLR-DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
+ P +++ S+ R P + + + + +E ++ I+ LAQ + +M
Sbjct: 79 VDPDLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVM 138
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL-----------------FD-MPS 156
+R+ + R D + I G ++ +S I L FD M
Sbjct: 139 ERVINANMHRIVD------VLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIK 192
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
P VK N +L +L L + +Y + + G++ N LL C+ G ++
Sbjct: 193 SRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQ 252
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
+L E ++ C PN TY+ L++GL +KG E+A GL+ M G+ T+N LI
Sbjct: 253 GLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIY 312
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G +G + E + L E M KG P A+Y +YGL R +A + + M+ + P
Sbjct: 313 GYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP 372
Query: 337 SFVSYKKLIHGLC 349
VSY LI+G C
Sbjct: 373 DVVSYNTLIYGYC 385
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 40/289 (13%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLY 179
+ F Y + K+ GR+S A++ L DM + N P V ++N ++ NL+ + L+
Sbjct: 343 NSFIYGLCKL-----GRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 397
Query: 180 GEIQGIYT---------------------SAAKLGVEI-------DACCLNILLKGLCEN 211
E++ IY A +L VE+ D IL+ G C+
Sbjct: 398 DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKM 457
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G+L A DE + E + Y+T + G + G+ AF L E M ++G D + +
Sbjct: 458 GSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIY 517
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N+++ GL K G +EE +LL++M G P+ +Y +++ L+ R + +E+ M+
Sbjct: 518 NVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLS 577
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++PS V+Y LIHG + +E +M ++G +P + + ++
Sbjct: 578 KGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLI 626
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ + ++ L +M C P+ T+N+++N L + + +G+ K G+++ A
Sbjct: 247 GGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 306
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G G L A + +E + P V TY++ ++GLC+ G + +A L M
Sbjct: 307 YNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML 366
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ + D V++N LI G + G + + L + ++ +P +Y +L GL +
Sbjct: 367 ANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELE 426
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF-VPRMGMWREI 379
A++L MI E ++P V+Y L++G C + +M+ +G + I
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRI 486
Query: 380 VGCVTFGKDNR 390
VG + G +R
Sbjct: 487 VGELKLGDTSR 497
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D N+++ GLC+ GNLE A +L + P+ TY++++H E G + +
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ M S+G+ VT+ +LI G +G++E M+ KG PN +Y ++ G
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLING 628
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L +R +A M+ + + P+ SY LI+ CN ++ + K+M+ +G P
Sbjct: 629 LCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQP 687
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 7/277 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKA 147
P+ YT+++N + ++ + E L D + Y +I G + G S+A
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL--DSYAY-ATRIVGELKLGDTSRA 498
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M + P + +N+V++ L E + GV D ++
Sbjct: 499 FSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHA 558
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
ENG L + E + P+V TY+ L+HG KG +E AF M+ +GI +
Sbjct: 559 HLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPN 618
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+N LI+GL K ++++ M KG +PN SY ++ + + EA L
Sbjct: 619 VITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYK 678
Query: 328 RMICERMSPSFVSYKKLIHGL---CNQKLVEDVDWVL 361
+M+ + P ++ L+ L C + V ++ +L
Sbjct: 679 QMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLL 715
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 7/247 (2%)
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
IK YG + +SK IE L V FN+++N + + KLG
Sbjct: 97 IKHYGTVLS-LSKRIELL------RIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLG 149
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
E DA + L+ GLC A DE +PN+ TY+T++ G C+ G A
Sbjct: 150 FEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAV 209
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
GLL++M+ G D V +N +I GL K V E + + +KGKG P+ +Y +++GL
Sbjct: 210 GLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGL 269
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ + EA L M+ + P V++ L+ LC + ++ + ++K M+++G P
Sbjct: 270 CNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNY 329
Query: 374 GMWREIV 380
+ ++
Sbjct: 330 ATYNSLM 336
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 149/327 (45%), Gaps = 15/327 (4%)
Query: 53 KDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIED 112
+D ++ FS L+ SVL + K + P+ ++ +IN L +F +
Sbjct: 117 RDVFHFNILINCFSRLQRVDFAFSVLGKIIKL-GFEPDAVTFSSLINGLCFEDKFARAME 175
Query: 113 IMQRIKVEKLCRFSDGF------FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF 166
+ + G+ + +IK + + G+ + A+ L M P + +
Sbjct: 176 FFDEM-------VASGYQPNLHTYNTIIKGFCKI-GKTTVAVGLLKKMDKAGGRPDIVIY 227
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
N +++ L +L E I++ GV D +IL+ GLC + E A + +E
Sbjct: 228 NTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMS 287
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
N P+V T++ L+ LC++G + EA G+++ M +G++ + T+N L++G Q KV E
Sbjct: 288 LNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFE 347
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+ + M KGC PN SY ++ G +R EA+EL M + P+ +Y LI
Sbjct: 348 ARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLIS 407
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRM 373
GLC + + K M QG P +
Sbjct: 408 GLCQAGRHCEARELFKDMQAQGCSPDL 434
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 4/288 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR-IS 145
Y PN Y II + + +++ K++K D YN I I G R +S
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLK--KMDKAGGRPDIVIYNTI-IDGLCKDRLVS 241
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A++ ++ P V T++++++ L ++ E ++ L + D NIL+
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC+ G L A ++ ++ EPN TY++LM+G C + V EA + + M ++G
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ V++NILI+G K +++E +L + M +G PN+ +Y ++ GL R EA+EL
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
M + SP V+ L+ LC +++ + + M P +
Sbjct: 422 FKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNL 469
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 133/289 (46%), Gaps = 5/289 (1%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
++K F + + +L + K P+ +Y II+ L + + DI IK +
Sbjct: 195 IIKGFCKIGKTTVAVGLLKKMDKAGG-RPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGK 253
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLY 179
+ D F Y+++ ++G + LF +M S N P V TFN++++ L +
Sbjct: 254 GV--RPDVFTYSIL-MHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGML 310
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
E QGI + GVE + N L+ G C + A V D + C PNV +Y+ L
Sbjct: 311 SEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNIL 370
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
++G C+ ++EA L + M G+ +T +N LISGL + G+ E +L + M+ +GC
Sbjct: 371 INGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGC 430
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
P+ + +L L A L M + P+ V+Y LI +
Sbjct: 431 SPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAM 479
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 37/310 (11%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS 156
+++ L + K + + + +RI++ ++ R D F +N++ + R+ A L +
Sbjct: 90 LLSALVRIKHYGTVLSLSKRIELLRIER--DVFHFNILINCFSRLQRVDFAFSVLGKIIK 147
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
P TF+ ++N L + + G + + N ++KG C+ G
Sbjct: 148 LGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTV 207
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLM-----------------------------------H 241
A +L + K P++ Y+T++ H
Sbjct: 208 AVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMH 267
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GLC EEA L M S I D VTFNIL+ L K+G + E +++ M KG P
Sbjct: 268 GLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEP 327
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N A+Y ++ G + + EA+ + MI + P+ VSY LI+G C + +++ +
Sbjct: 328 NYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELF 387
Query: 362 KKMVQQGFVP 371
+M +G +P
Sbjct: 388 DEMSFRGLIP 397
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%)
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P + F+ +L+ LV K YG + + L +E D NIL+ ++ AF
Sbjct: 81 LPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFS 140
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
VL + K EP+ T+S+L++GLC + A + M + G + T+N +I G
Sbjct: 141 VLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFC 200
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K GK + LL++M G P+ Y ++ GL + EA ++ + + + P
Sbjct: 201 KIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVF 260
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y L+HGLCN E+ + +M+ +P
Sbjct: 261 TYSILMHGLCNSDQKEEASALFNEMMSLNIMP 292
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 96/196 (48%), Gaps = 2/196 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + ++++KL + + I+ +I +EK + + +++ Y + ++ +A
Sbjct: 292 PDVVTFNILVDKLCKEGMLSEAQGII-KIMIEKGVEPNYATYNSLMNGYC-LQNKVFEAR 349
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M + C P+V ++N+++N A+ E + ++ + G+ + N L+ GL
Sbjct: 350 MVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGL 409
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G A + + Q C P++ T + L+ LC+ G ++ A L M+ + +
Sbjct: 410 CQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNL 469
Query: 269 VTFNILISGLRKQGKV 284
VT++ILI + K GK+
Sbjct: 470 VTYDILIRAMYKSGKI 485
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 76/172 (44%)
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C N+E A + + ++ P + + L+ L + L +R+E I+ D
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
FNILI+ + +V+ +L ++ G P++ ++ ++ GL + +F A E
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ P+ +Y +I G C +LKKM + G P + ++ I+
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTII 231
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 126/247 (51%), Gaps = 1/247 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ +A L M P V T+N +++ K + + I+ + A+LGV D
Sbjct: 191 GRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSY 250
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+IL+ G C+ ++ A +L E + PNV TYS+L+ GLC+ G + A L++ M
Sbjct: 251 SILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHD 310
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + VT++ ++ L K +V+ + LL +MK +G PN +Y ++ GL + +
Sbjct: 311 RGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLED 370
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A+++ ++ + + + +Y +I G C++ L ++ +L KM G +P + EI+
Sbjct: 371 ARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTY-EIII 429
Query: 382 CVTFGKD 388
F KD
Sbjct: 430 LSLFKKD 436
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 148/306 (48%), Gaps = 16/306 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL-------CRFSDGFFYNVIKIY 137
++ NP+ +T++++ + R ++++ + ++ + DG+F
Sbjct: 171 ENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYF------- 223
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+ +++KA M P ++++++++N K+ E + + +
Sbjct: 224 --LVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPN 281
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+ L+ GLC++G + A ++DE + PN+ TYS+++ LC+ V+ A LL
Sbjct: 282 VVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLT 341
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+M+++GI + T+ ILI GL + GK+E+ K+ E + KG N +Y ++ G DK
Sbjct: 342 QMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKG 401
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
F EA L+ +M P+ +Y+ +I L + E + +L +M++ F R+ +
Sbjct: 402 LFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTN 461
Query: 378 EIVGCV 383
+++ +
Sbjct: 462 DLIASI 467
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 10/233 (4%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
N P FN +L LV +K Y + + G++ + NIL+ C+ G++ +A
Sbjct: 57 NPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSA 116
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV----------EEAFGLLERMESEGIDAD 267
F VL + K +PN T +TL+ GLC G + ++A L +M E I+ D
Sbjct: 117 FSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPD 176
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TF IL+ G K+G+V+E +L M +G P +Y ++ G K+ +AK +
Sbjct: 177 VYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFN 236
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M +SP SY LI+G C K++++ +LK+M + +P + + ++
Sbjct: 237 TMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLI 289
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
N +++ A + + +QN P ++ ++ L + + L ++ME GI + V
Sbjct: 40 NNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 99
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL------DKK----RFP 320
NILI+ + G + +L ++ G PN+ + ++ GL DK +
Sbjct: 100 CNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLK 159
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A +L +MI E ++P ++ L+ G C + V++ VL M+ QG P + + ++
Sbjct: 160 DAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLM 219
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y++II+ L + R D ++ + +K L D Y + I+G K
Sbjct: 481 PNAISYSIIIDGLCKCGREDEARELFKEMKA--LGVIPDVISYTSL-IHGFCRSGKWKDA 537
Query: 149 ETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ LF +M P V TF++++++L E + + G + L+KG
Sbjct: 538 KYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 597
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE----- 262
LC N + A + + K C P+V TY TLM GLC+ GN++ A L ++M S+
Sbjct: 598 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 657
Query: 263 -GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
D ++++I+I GL K G+ +E +L + MK G PN SY +++G + +
Sbjct: 658 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 717
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
AK L M+ + + + V+Y +IHG C + ++
Sbjct: 718 AKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQID 751
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 6/234 (2%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GR +A E +M + P V ++ +++ + + + + ++ +GV+ D
Sbjct: 496 CGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTT 555
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
++L+ LC+ G + A +L+ ++ C PN TY+TL+ GLC + EA L +M+
Sbjct: 556 FSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQ 615
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERM------KGKGCYPNSASYQEVLYGLL 314
G D VT+ L+ GL + G ++ ++L ++M G P+ SY ++ GL
Sbjct: 616 KLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLC 675
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
R EA+EL M + P+ +SY LIHG C +ED + +MV QG
Sbjct: 676 KHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 729
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 8/233 (3%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYTSAAKL 192
M RISKA + M C P+V T ++ N+ ++ +L+ + TS +
Sbjct: 419 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS-DTSPYGI 477
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
+ +A +I++ GLC+ G + A + E P+V +Y++L+HG C G ++A
Sbjct: 478 NCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDA 537
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L M G+ D TF++LI L K+GKV E +LLE M +GC PN+ +Y ++ G
Sbjct: 538 KYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 597
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
L R EA +L +M P V+Y L+ GLC ++ + KKM+
Sbjct: 598 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 650
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 145/330 (43%), Gaps = 25/330 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-----AGR 143
P+ T ++ L R + +K++KL G NV+ M +G
Sbjct: 405 PDVVTCTTLVKGLCMKHRISKATQLF--LKMQKL-----GCMPNVVTCATLMKGLCQSGN 457
Query: 144 ISKAIE----TLFDMPSY--NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
I A+E L D Y NC P+ +++++++ L E + ++ LGV D
Sbjct: 458 IKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPD 517
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
L+ G C +G + A Y+ +E +P+V T+S L+ LC++G V EA LLE
Sbjct: 518 VISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLE 577
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M G +TVT+ L+ GL ++ E +L +M+ GC P+ +Y ++ GL
Sbjct: 578 VMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTG 637
Query: 318 RFPEAKELVGRMICE------RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A EL +M+ + P +SY +I GLC ++ + K+M G +P
Sbjct: 638 NIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIP 697
Query: 372 RMGMWREIV-GCVTFGKDNRNRVYVTETVD 400
+ + ++ G GK + E VD
Sbjct: 698 NVISYTSLIHGFCRSGKLEDAKHLFNEMVD 727
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 142/320 (44%), Gaps = 15/320 (4%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI----E 149
Y+ +I L R + +K KL D Y + G+I+ A+ E
Sbjct: 48 YSTLIKGLCMKHRISEATQLFMSMK--KLGCRPDAIAYGTLMKGLCQTGKINIALHLHQE 105
Query: 150 TLFDMPSYN--CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L D Y C P++ +++++++ L + E + ++ G+ D L+ G
Sbjct: 106 MLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHG 165
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C +G E A + +E +V T S L+ LC++G V EA LLE M G D
Sbjct: 166 FCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILD 225
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT++ LI GL + ++ E +L M+ GC P++ +Y ++ GL A +L
Sbjct: 226 IVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQ 285
Query: 328 RMICE------RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV- 380
M+ + + P+ +SY +I GLC + ++ + K+M QG +P + + ++
Sbjct: 286 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIH 345
Query: 381 GCVTFGKDNRNRVYVTETVD 400
G GK + + E +D
Sbjct: 346 GFCLSGKWEKAKCLFNEMLD 365
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 106/250 (42%), Gaps = 41/250 (16%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A E L M C + T++ ++ L E ++ S KLG DA
Sbjct: 205 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAY 264
Query: 202 NILLKGLCENGNLEAAF-------------------------YVLD-------------- 222
L+KGLC+ GN+ A ++D
Sbjct: 265 GTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 324
Query: 223 --EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
E Q P+V +Y+TL+HG C G E+A L M GI D T ++LI L K
Sbjct: 325 FKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCK 384
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+GKV E KLLE + +GC P+ + ++ GL K R +A +L +M P+ V+
Sbjct: 385 KGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVT 444
Query: 341 YKKLIHGLCN 350
L+ GLC
Sbjct: 445 CATLMKGLCQ 454
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 103/250 (41%), Gaps = 41/250 (16%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A E L M C + T++ ++ L E ++ S KLG DA
Sbjct: 24 GKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAY 83
Query: 202 NILLKGLCENGNLEAAFY-----------------------------------------V 220
L+KGLC+ G + A + +
Sbjct: 84 GTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEAREL 143
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
E Q P+V +Y++L+HG C G E+A L M GI +D T ++LI L K
Sbjct: 144 FKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCK 203
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+GKV E +LLE M +GC + +Y ++ GL K R EA L M P ++
Sbjct: 204 EGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIA 263
Query: 341 YKKLIHGLCN 350
Y L+ GLC
Sbjct: 264 YGTLMKGLCQ 273
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
+G++ D +L+ C+ G + A +L+ ++ C ++ TYSTL+ GLC K + E
Sbjct: 4 VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISE 63
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM------KGKGCYPNSAS 305
A L M+ G D + + L+ GL + GK+ + L + M G C P S
Sbjct: 64 ATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVS 123
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ GL +R EA+EL M + M P +SY LIHG C E + +M+
Sbjct: 124 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEML 183
Query: 366 QQGF 369
G
Sbjct: 184 DVGI 187
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 137/320 (42%), Gaps = 15/320 (4%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI----E 149
Y+ +I L R + + ++KL D Y + G I+ A+ E
Sbjct: 229 YSTLIKGLCMKHRISEATRLF--MSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQE 286
Query: 150 TLFDMPSYN--CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L D Y C P++ +++++++ L + E + ++ G+ D L+ G
Sbjct: 287 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHG 346
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C +G E A + +E +P+V T S L+ LC+KG V EA LLE + G D
Sbjct: 347 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPD 406
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT L+ GL + ++ + +L +M+ GC PN + ++ GL A EL
Sbjct: 407 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 466
Query: 328 RMICE------RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV- 380
M+ + P+ +SY +I GLC ++ + K+M G +P + + ++
Sbjct: 467 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIH 526
Query: 381 GCVTFGKDNRNRVYVTETVD 400
G GK + E VD
Sbjct: 527 GFCRSGKWKDAKYLFNEMVD 546
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 6/216 (2%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T +++++ E + + G +D + L+KGLC + A +
Sbjct: 8 PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQL 67
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE----GIDADT--VTFNIL 274
K C P+ Y TLM GLC+ G + A L + M ++ GI V+++I+
Sbjct: 68 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSII 127
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I GL K + +E +L + MK +G P+ SY +++G ++ +AK L M+ +
Sbjct: 128 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGI 187
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ LI LC + V + + +L+ M+Q+G +
Sbjct: 188 RSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCI 223
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 105/210 (50%), Gaps = 14/210 (6%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ ++++I+ L + + ++++ + +++ C + + ++K M RIS+A
Sbjct: 550 QPDVTTFSVLIDMLCKEGKVIEANELLE-VMIQRGCIPNTVTYTTLVKGL-CMNDRISEA 607
Query: 148 IETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYTSAAKLGVEI--DA 198
+ M C P V T+ ++ N+ + +L+ + + + + G D
Sbjct: 608 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELH---KKMLSDTGQYGTNFKPDV 664
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+I++ GLC++G + A + E PNV +Y++L+HG C G +E+A L
Sbjct: 665 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 724
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGM 288
M +G+ + VT++++I G K+G++++ +
Sbjct: 725 MVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754
>gi|410109917|gb|AFV61038.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
diamantinensis]
Length = 284
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 10/257 (3%)
Query: 140 MAGRISKAIETLFDMPSYNC---------WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
+G I+ +E+ F + C W T VL L+ K + + G Y
Sbjct: 20 FSGLITAYLESGFXHDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 79
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ G NIL+ C++G++ A V D K P+V +Y+TLM+G G+++
Sbjct: 80 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYXRLGDLD 139
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
E F L M + G+ D ++++LI+GL K+ K+++ +L + M KG PN ++ ++
Sbjct: 140 EGFRLKSAMLASGVQPDVYSYSVLINGLCKESKMDDANELFDEMLVKGLAPNGVTFTTLI 199
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
G K R A E+ RM+ + + P ++Y LI+GLC + ++ + ++ +M +G
Sbjct: 200 DGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMGMKGLK 259
Query: 371 PRMGMWREIV-GCVTFG 386
P + ++ GC G
Sbjct: 260 PDKITYTTLIDGCCKEG 276
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 69/129 (53%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V ++++++N L + ++ G+ + L+ G C+ G ++ A +
Sbjct: 155 PDVYSYSVLINGLCKESKMDDANELFDEMLVKGLAPNGVTFTTLIDGHCKKGRVDLAMEI 214
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G K
Sbjct: 215 YKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMGMKGLKPDKITYTTLIDGCCK 274
Query: 281 QGKVEEGMK 289
+G ++ +
Sbjct: 275 EGNLDTAFE 283
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 154 QPDVYSYSVLINGLCKESKMDDANELFDEMLVKGLA--PNGVTFTTLIDGHCKKGRVDLA 211
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + + G++ D L+ G
Sbjct: 212 MEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMGMKGLKPDKITYTTLIDG 271
Query: 208 LCENGNLEAAF 218
C+ GNL+ AF
Sbjct: 272 CCKEGNLDTAF 282
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 14/296 (4%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK-----VEKLCRFSDGFFYNVIKI 136
S+R+ E+ + L+I+ L++ D ++ +K V+ C F +I
Sbjct: 84 SRRERLRSGES-FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYC------FCVLISA 136
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ-GIYTSAAKLGVE 195
Y M G KA+E+ M ++C P V T+N++L +++ ++ + +Y K
Sbjct: 137 YAKM-GLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCS 195
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+ IL+ GL + G A + D+ + PN TY+ L+ GLC++G+ E+A L
Sbjct: 196 PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKL 255
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
M++ G D+V N L+ G K G++ E +LL + G Y ++ GL
Sbjct: 256 FYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFR 315
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+R+ +A EL M+ + P + Y LI GL +ED +L+ M +G P
Sbjct: 316 ARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITP 371
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 121/304 (39%), Gaps = 21/304 (6%)
Query: 98 INKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM----------------- 140
+ + K FD D+ + ++ D FF +Y M
Sbjct: 147 VESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMD 206
Query: 141 ----AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
GR S A + DM P+ T+ ++++ L + + ++ G
Sbjct: 207 GLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYP 266
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D+ N LL G C+ G + AF +L F K +R YS+L+ GL +AF L
Sbjct: 267 DSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELY 326
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M I D + + ILI GL K GK+E+ +KLL M KG P++ Y V+ L +
Sbjct: 327 ANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGR 386
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
E + L M P ++ LI +C LV + + ++ + G P + +
Sbjct: 387 GLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATF 446
Query: 377 REIV 380
++
Sbjct: 447 NALI 450
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 156/363 (42%), Gaps = 58/363 (15%)
Query: 38 ASHQDSDHHAYKL----NHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEAL 93
S +D+ Y++ N+ D ++ +L F L + +L + K +
Sbjct: 247 GSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK-DGFVLGLRG 305
Query: 94 YTLIINKLAQAKR----FDAIEDIMQR-IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
Y+ +I+ L +A+R F+ ++++R IK D Y ++ + AG+I A+
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKRNIK-------PDIILYTILIQGLSKAGKIEDAL 358
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L MPS P +N V+ L L E + + ++ DAC IL+ +
Sbjct: 359 KLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSM 418
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-------- 260
C NG + A + E K C P+V T++ L+ GLC+ G ++EA LL +ME
Sbjct: 419 CRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLF 478
Query: 261 -------------------------------SEGIDADTVTFNILISGLRKQGKVEEGMK 289
G D V++N+LI+G ++G ++ +K
Sbjct: 479 LRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALK 538
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
LL ++ KG P+S +Y ++ GL R EA +L R SP+ Y+ L+ C
Sbjct: 539 LLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSC 596
Query: 350 NQK 352
++
Sbjct: 597 RRR 599
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 129/315 (40%), Gaps = 46/315 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN YT++I+ L Q + + +K + D +N + GR+ +A
Sbjct: 230 SPNRVTYTILISGLCQRGSPEDARKLFYEMKASG--NYPDSVAHNALLDGFCKLGRMVEA 287
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L ++ ++ +++ L A+ Y + +Y + K ++ D IL++G
Sbjct: 288 FELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQG 347
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL-LERMESEGIDA 266
L + G +E A +L P + P+ Y+ ++ LC +G +EE L LE E+E
Sbjct: 348 LSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF-P 406
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T ILI + + G V + ++ ++ GC P+ A++ ++ GL EA+ L+
Sbjct: 407 DACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466
Query: 327 GRMICERM---------------------------------------SPSFVSYKKLIHG 347
+M R SP VSY LI+G
Sbjct: 467 HKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLING 526
Query: 348 LCNQKLVEDVDWVLK 362
C + D+D LK
Sbjct: 527 FCREG---DIDGALK 538
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 137/376 (36%), Gaps = 110/376 (29%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK-----------------VEKLC--- 123
+++ P+ LYT++I L++A + IED ++ ++ ++ LC
Sbjct: 331 KRNIKPDIILYTILIQGLSKAGK---IEDALKLLRSMPSKGITPDTYCYNAVIKALCGRG 387
Query: 124 ----------------RFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
F D + ++ G + KA E ++ C PSV TFN
Sbjct: 388 LLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFN 447
Query: 168 LVLNLLVS-------------------AKLY-----------------GEIQGIYTSAAK 191
+++ L A L+ G I Y + A
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAH 507
Query: 192 L---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G D N+L+ G C G+++ A +L+ + P+ TY+TL++GL G
Sbjct: 508 FADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGR 567
Query: 249 VEEAFGLL----ERMESEGIDADTVT-----------FNILISGLRK------------- 280
EEAF L + S + +T FN+ + L+K
Sbjct: 568 EEEAFKLFYAKDDFRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDETANEIE 627
Query: 281 ----QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
+G+ E ++ L + + Y L GL RF EA + + +++
Sbjct: 628 QCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILV 687
Query: 337 SFVSYKKLIHGLCNQK 352
+ S KLIHGLC ++
Sbjct: 688 TPPSCVKLIHGLCKRE 703
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 139/307 (45%), Gaps = 16/307 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK-------- 135
R Y PN Y ++N L + M +K+ + +G F IK
Sbjct: 190 RMGYRPNVVTYGTLLNGLCMTG------NTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCT 243
Query: 136 IYGNMA--GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
I ++ G I K E +M P V ++ +++ + + +G++ G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
V + N+L+ LC+ G +E A ++L ++ P+ TY+TL+ G C +G +++A
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L MES+GI+ D V++N+LI+G K G++ E KL M K P +Y +L GL
Sbjct: 364 DLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGL 423
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ + +A L G M ++P +Y L+ GLC + + + + F P +
Sbjct: 424 FREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSI 483
Query: 374 GMWREIV 380
++ ++
Sbjct: 484 QIFNCLI 490
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 139/291 (47%), Gaps = 2/291 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + +P+ Y+ II+ + R++ + + + E + + +NV+ AG
Sbjct: 265 KGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGV--HPNVVTFNVLIDALCKAG 322
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A L M P T+N +++ + + ++ S G+E DA N
Sbjct: 323 KMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYN 382
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+L+ G C++G + A + E + P V TY+TL+ GL +G V +A+ L M+
Sbjct: 383 VLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVH 442
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ ++ T+NIL+ GL K + E M+L ++ P+ + ++ GL ++ A
Sbjct: 443 DLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIA 502
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+EL R+ E + P+ ++Y +IHGLC +E+ + M ++G P +
Sbjct: 503 RELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNL 553
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 41/261 (15%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + +FN +L + K Y ++ +Y + +G+ D LNIL+ C ++ V
Sbjct: 90 PPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAV 149
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG--- 277
L E ++ PN T+++L+ GLC + EA GLL +M G + VT+ L++G
Sbjct: 150 LGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCM 209
Query: 278 --------------------------------------LRKQGKVEEGMKLLERMKGKGC 299
L K G +++G +L MKG+G
Sbjct: 210 TGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGI 269
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P+ +Y +++G+ R+ AK L M+ E + P+ V++ LI LC +E+ +
Sbjct: 270 SPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANH 329
Query: 360 VLKKMVQQGFVPRMGMWREIV 380
+LK M+Q+G P + ++
Sbjct: 330 LLKLMIQRGESPDTFTYNTLI 350
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 140/308 (45%), Gaps = 4/308 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN + ++I+ L +A + + ++ ++ +++ D F YN + + GRI A
Sbjct: 305 HPNVVTFNVLIDALCKAGKMEEANHLL-KLMIQR-GESPDTFTYNTLIDGFCLEGRIDDA 362
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ M S ++N+++N + E + +Y + N LL G
Sbjct: 363 RDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTG 422
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L G + A+ + E + P TY+ L+ GLC+ ++ EA L +E+
Sbjct: 423 LFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPS 482
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
FN LI GL K K+E +L R+ +G PN +Y +++GL + AK+L
Sbjct: 483 IQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFL 542
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
M + +P+ V++ L+ G C ++ V +L++M ++ F P +V ++ K
Sbjct: 543 GMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLS--K 600
Query: 388 DNRNRVYV 395
D + R Y+
Sbjct: 601 DEKYREYL 608
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 37/278 (13%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ +P+ Y +I+ R D D+ + +E +D YNV+ +GR
Sbjct: 336 QRGESPDTFTYNTLIDGFCLEGRIDDARDLF--VSMESKGIETDAVSYNVLINGYCKSGR 393
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A + +M P+V T+N +L L + ++ + ++C NI
Sbjct: 394 MVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNI 453
Query: 204 LLKGLCENGNLEAA---FYVLDEFPKQ------NC------------------------- 229
LL GLC+N +L A F+ L+ Q NC
Sbjct: 454 LLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEG 513
Query: 230 -EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
EPNV TY+ ++HGLC+ G +E A L ME +G + VTFN L+ G + ++++ +
Sbjct: 514 LEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVV 573
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+LL+ M K P++++ V+ L +++ E L+
Sbjct: 574 ELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLL 611
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 101/214 (47%), Gaps = 2/214 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K+ P Y ++ L + + ++ +KV L + YN++ +
Sbjct: 407 KEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLT--PESCTYNILLDGLCKNNHL 464
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S+A+E + +++ PS++ FN +++ L A+ + ++ + G+E + ++
Sbjct: 465 SEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVM 524
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC++G LE A + ++ C PN+ T++TLM G C+ +++ LL+ M +
Sbjct: 525 IHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDF 584
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
D T +I++ L K K E + LL +G
Sbjct: 585 SPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
Query: 204 LLKGLCENGNLE--AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
LK C++G+++ AF V + P + +++TL+ + + + L +RM
Sbjct: 61 FLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSL 120
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D +T NILI+ KV+ G+ +L M +G PN+ ++ ++ GL R E
Sbjct: 121 IGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISE 180
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC 349
A L+ +M+ P+ V+Y L++GLC
Sbjct: 181 ATGLLRKMVRMGYRPNVVTYGTLLNGLC 208
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 139/294 (47%), Gaps = 14/294 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGRISKA 147
PN+ Y I++ + K D + + K+E+L D Y+ I GR + A
Sbjct: 114 PNQITYGTIVDGMC--KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDA 171
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M +P + T++ ++N S+ + E Q + + D + L+
Sbjct: 172 QNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINA 231
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE----- 262
L + G+L +A +L E PNV T +TL+ GLC+ G +++A + + M+
Sbjct: 232 LVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDID 291
Query: 263 ------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
G++ D T+NILISGL +GK E +L E M +G P++ +Y ++ GL +
Sbjct: 292 ATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ 351
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
R EA ++ M + SP+ V++ LI G C +V+D + +M ++G V
Sbjct: 352 SRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIV 405
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 5/232 (2%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ A+ T + P++ TFN +L+ L E ++ K V
Sbjct: 30 KLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPNV----VTFT 85
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES- 261
L+ GLC G + A +LD + +PN TY T++ G+C+ G+ A LL +ME
Sbjct: 86 TLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEL 145
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
I D V ++ +I GL K G+ + L M+ KG +P+ +Y ++ G ++ E
Sbjct: 146 SHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSE 205
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
A+ L+ M+ ++SP V++ LI+ L + + +L++M+ G P +
Sbjct: 206 AQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNV 257
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 141/310 (45%), Gaps = 26/310 (8%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------G 142
PN +T ++N L + R ++ R+ DG N I YG + G
Sbjct: 79 PNVVTFTTLMNGLCREGRVVEAVALLDRM-------VEDGLQPNQIT-YGTIVDGMCKMG 130
Query: 143 RISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
A+ L M + P V ++ +++ L + + Q ++ G+ D
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ G C +G A +L E + P+V T+S L++ L ++G++ A LL+ M S
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-----------GCYPNSASYQEVL 310
G+ + VT N L+ GL GK+++ +++ + M+ G P+ +Y ++
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
GL+++ +F EA+EL M + P V+Y +I+GLC Q +++ + M + F
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370
Query: 371 PRMGMWREIV 380
P + + ++
Sbjct: 371 PNIVTFNTLI 380
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 132/275 (48%), Gaps = 21/275 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL----CRFSDGFFYNVIKIYGNMAGRI 144
P+ Y+ +IN + ++ + ++Q + V K+ FS G ++K G +
Sbjct: 185 PDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFS-GLINALVK-----EGDL 238
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLV-SAKLYGEIQ----------GIYTSAAKLG 193
+ A + L +M S P+V T N +L+ L S KL ++ I + A G
Sbjct: 239 NSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG 298
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
VE D NIL+ GL G A + +E P + P+ TYS++++GLC++ ++EA
Sbjct: 299 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEAT 358
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+ + M S+ + VTFN LI+G K G V++G++L M +G N+ +Y ++ G
Sbjct: 359 QMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGF 418
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ ++ MI + P ++ + ++ GL
Sbjct: 419 RKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 124/254 (48%), Gaps = 23/254 (9%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM---- 140
+ +P+ ++ +IN L + ++ +D++Q + S G NV+ +
Sbjct: 216 RKISPDVVTFSGLINALVKEGDLNSAQDLLQEM-------ISSGVCPNVVTCNTLLDGLC 268
Query: 141 -AGRISKAIE-------TLFDMPSYNCW----PSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+G++ A+E ++ D+ + + + P V+T+N++++ L++ + E + +Y
Sbjct: 269 DSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 328
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+ D + ++ GLC+ L+ A + D ++ PN+ T++TL+ G C+ G
Sbjct: 329 MPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGM 388
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V++ L M GI A+ +T+ LI G RK G + + + + M G YP++ + +
Sbjct: 389 VDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRN 448
Query: 309 VLYGLLDKKRFPEA 322
+L GL K+ A
Sbjct: 449 MLTGLWSKEELKRA 462
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 9/183 (4%)
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
L + D NIL+K C L A + K P + T++TL+HGLC + V E
Sbjct: 9 LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSE 68
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A L +M + VTF L++GL ++G+V E + LL+RM G PN +Y ++
Sbjct: 69 ALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 124
Query: 312 GLLDKKRFPEAKELVGRMICERMS---PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
G+ A L+ +M E +S P V Y +I GL D + +M +G
Sbjct: 125 GMCKMGDTVSALNLLRKM--EELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKG 182
Query: 369 FVP 371
P
Sbjct: 183 IFP 185
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 71/154 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+ +A E +MP P T++ ++N L E ++ S +
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTF 376
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C+ G ++ + E ++ N TY TL+ G + GN+ + + + M S
Sbjct: 377 NTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMIS 436
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
G+ DT+T +++GL + +++ + +LE ++
Sbjct: 437 SGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 144/305 (47%), Gaps = 5/305 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P+ +Y II+ L + K D+ + V+ + + YN + +YG + G + +A
Sbjct: 201 PDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGIS--PNVVTYNAL-VYGFCIMGHLKEA 257
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L +M N P V TFN +++ L + + K ++ D N L+ G
Sbjct: 258 FSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDG 317
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
++ A YV + PNVRTY+T++ GLC++ V+EA L E M+ + + D
Sbjct: 318 YFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPD 377
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+ LI GL K +E + L ++MK +G P+ SY +L L R AKE
Sbjct: 378 IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQ 437
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
R++ + + +Y +I+GLC L + + KM +G +P ++ I+ C F K
Sbjct: 438 RLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTII-CALFEK 496
Query: 388 DNRNR 392
D ++
Sbjct: 497 DENDK 501
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 147/329 (44%), Gaps = 25/329 (7%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + ++ F +L SVL KR Y+PN + +N L + F
Sbjct: 97 DLCTLNILMNCFCHLTHITFAFSVLANILKR-GYHPN----AITLNTLIKGLCF------ 145
Query: 114 MQRIKVEKLCRFSD-----GFFYNVIKIYGNMAGRISKAIET------LFDMPSYNCWPS 162
R +++K F D GF N + Y + + K ET L + ++ P
Sbjct: 146 --RGEIKKALYFHDQVVAQGFQLNQVS-YRTLINGLCKTGETKAVARLLRKLEGHSVKPD 202
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
V +N +++ L KL G+ +Y+ G+ + N L+ G C G+L+ AF +L+
Sbjct: 203 VVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLN 262
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
E +N P+V T++TL+ L ++G ++ A +L M I D VT+N LI G
Sbjct: 263 EMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLN 322
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
KV+ + M G PN +Y ++ GL +K EA L M + M P V+Y
Sbjct: 323 KVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYT 382
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
LI GLC +E + KKM +QG P
Sbjct: 383 SLIDGLCKNHHLERAIALCKKMKEQGIQP 411
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 118/232 (50%), Gaps = 2/232 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P FN +L+ LV+ K Y + ++ G D C LNIL+ C ++ AF V
Sbjct: 61 PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L K+ PN T +TL+ GLC +G +++A +++ ++G + V++ LI+GL K
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ + +LL +++G P+ Y +++ L K +A +L MI + +SP+ V+
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
Y L++G C +++ +L +M + P + + ++ GK+ + +
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLID--ALGKEGKMK 290
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 146/328 (44%), Gaps = 26/328 (7%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
S+LN+ K K+ NP+ + +I+ L + + A + ++ + K C D YN +
Sbjct: 259 SLLNEM-KLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM--KACIKPDVVTYNSLI 315
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
++ A + M P+V+T+ +++ L K+ E ++ +
Sbjct: 316 DGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMI 375
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D L+ GLC+N +LE A + + +Q +P+V +Y+ L+ LC+ G +E A
Sbjct: 376 PDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEF 435
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+R+ +G + T+N++I+GL K E M L +M+GKGC P++ +++ ++ L +
Sbjct: 436 FQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFE 495
Query: 316 KK-----------------------RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
K R EAK ++ M + P V+Y L+ G
Sbjct: 496 KDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVN 555
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ +V M Q G P + + ++
Sbjct: 556 ELKHAKYVFYSMAQMGVTPNVQCYTIMI 583
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 140/308 (45%), Gaps = 23/308 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI---------- 134
K Y+ N Y ++IN L +A F D+ +++ K C F +I
Sbjct: 442 KGYHLNVQTYNVMINGLCKADLFGEAMDLKSKME-GKGCMPDAITFKTIICALFEKDEND 500
Query: 135 ---KIYGNMAGR---------ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
KI M R + +A L M P V T+ +++
Sbjct: 501 KAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHA 560
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ ++ S A++GV + C I++ GLC+ ++ A + +E +N PN+ TY++L+
Sbjct: 561 KYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDA 620
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC+ ++E A LL+ M+ GI D ++ IL+ GL K G++E ++ +R+ KG + N
Sbjct: 621 LCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLN 680
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
Y ++ L F EA +L +M + P V++ +I L + + + +L
Sbjct: 681 VQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILX 740
Query: 363 KMVQQGFV 370
+M+ +G +
Sbjct: 741 EMIARGLM 748
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 104/235 (44%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + T N+++N + + K G +A LN L+KGLC G ++ A Y
Sbjct: 96 PDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYF 155
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+ Q + N +Y TL++GLC+ G + LL ++E + D V +N +I L K
Sbjct: 156 HDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCK 215
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+ + L M KG PN +Y ++YG EA L+ M + ++P +
Sbjct: 216 NKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCT 275
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYV 395
+ LI L + ++ VL M++ P + + ++ F +N YV
Sbjct: 276 FNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYV 330
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 3/204 (1%)
Query: 180 GEIQGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
GE + + KL V+ D N ++ LC+N L A + E + PNV TY
Sbjct: 182 GETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTY 241
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+ L++G C G+++EAF LL M+ + I+ D TFN LI L K+GK++ +L M
Sbjct: 242 NALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMK 301
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
P+ +Y ++ G + AK + M ++P+ +Y +I GLC +K+V++
Sbjct: 302 ACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDE 361
Query: 357 VDWVLKKMVQQGFVPRMGMWREIV 380
+ ++M + +P + + ++
Sbjct: 362 AMSLFEEMKYKNMIPDIVTYTSLI 385
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 144/339 (42%), Gaps = 38/339 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + P+ YT++++ L + R + ++ QR+ V+ G+ NV + Y M
Sbjct: 405 KEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVK-------GYHLNV-QTYNVMIN 456
Query: 143 RISKA------IETLFDMPSYNCWPSVKTFNLVLNLLVS---------------AKLYGE 181
+ KA ++ M C P TF ++ L A+ E
Sbjct: 457 GLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQE 516
Query: 182 IQGIYTSAAK--LGVEIDAC------CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ + AK L V AC L+ G L+ A YV + PNV
Sbjct: 517 ARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNV 576
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+ Y+ ++ GLC+K V+EA L E M+ + + + VT+ LI L K +E + LL+
Sbjct: 577 QCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKE 636
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
MK G P+ SY +L GL R AKE+ R++ + + Y +I+ LC L
Sbjct: 637 MKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGL 696
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
++ + KM +G +P + +I+ F KD ++
Sbjct: 697 FDEALDLQXKMEDKGCMPD-AVTFDIIIWALFEKDENDK 734
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 4/217 (1%)
Query: 168 LVLNLLVSAKLY-GEIQG---IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE 223
+ LN L+ + GEI+ + G +++ L+ GLC+ G +A +L +
Sbjct: 134 ITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRK 193
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283
+ +P+V Y+T++H LC+ + +A L M +GI + VT+N L+ G G
Sbjct: 194 LEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGH 253
Query: 284 VEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKK 343
++E LL MK K P+ ++ ++ L + + AK ++ M+ + P V+Y
Sbjct: 254 LKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNS 313
Query: 344 LIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LI G V++ +V M Q G P + + ++
Sbjct: 314 LIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMI 350
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + ++ PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 121/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ + G + A V D K + P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M++ G+ D T+++LI+GL K+ K+++ +L + M G PN ++
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 134/272 (49%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQSV-FDAITKWSLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G++P
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K + N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + P+ +Y ++YGL K +A++L+ M + + P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLV--PNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ GLC++G +A +L M S G+ +
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
T+ ++I+ K+G V G KLL+ M+ G P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
javanica]
Length = 431
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ + + + G Y + G
Sbjct: 85 SGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYF 144
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P V +Y+TLM+G G ++E F L M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRLGXLDEGFRLKSAMX 204
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ +++ +L + M KG PNS ++ ++ G R
Sbjct: 205 ASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTFTTLIDGHCKNGRVD 264
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + + P F++Y L +GLC + + ++ +M +G P + ++
Sbjct: 265 LAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLI 324
Query: 381 -GCVTFG 386
GC G
Sbjct: 325 DGCCKEG 331
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 125/253 (49%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + P V ++N ++N + E + +
Sbjct: 143 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPXVXSYNTLMNGYIRLGXLDEGFRLKS 201
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GL + ++ + DE + PN T++TL+ G C+ G
Sbjct: 202 AMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTFTTLIDGHCKNG 261
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N L GL K+G + + L++ M KG P+ +Y
Sbjct: 262 RVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYT 321
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 322 TLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLREMLSV 381
Query: 368 GFVPRMGMWREIV 380
G P G + I+
Sbjct: 382 GLKPDXGTYTMII 394
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 107/211 (50%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ ++ L+ G C+NG ++ A +
Sbjct: 210 PDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTFTTLIDGHCKNGRVDLAMEI 269
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q P+ TY+TL +GLC+KG++ +A GL++ M +G+ D T+ LI G K
Sbjct: 270 YKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCK 329
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 330 EGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDXGT 389
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V LK+M + G VP
Sbjct: 390 YTMIINEFCKKGDVWKGXKXLKEMQRNGHVP 420
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 4/226 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISK 146
P+ Y+++IN L + D ++ + + L S F I G+ GR+
Sbjct: 209 QPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTF---TTLIDGHCKNGRVDL 265
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+E M S P T+N + L + G+ + G++ D L+
Sbjct: 266 AMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLID 325
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+ G+L+AAF ++N + Y+ L+ GLC++G +A +L M S G+
Sbjct: 326 GCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKP 385
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
D T+ ++I+ K+G V +G K L+ M+ G P +Y ++ G
Sbjct: 386 DXGTYTMIINEFCKKGDVWKGXKXLKEMQRNGHVPXVVTYNVLMNG 431
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 85 SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYF 144
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN + ++ G R
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVD 264
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + + P ++Y LI+GLC + ++ V ++ +M +G P + ++
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLI 324
Query: 381 -GCVTFG 386
GC G
Sbjct: 325 DGCCKEG 331
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 131/255 (51%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 143 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 199
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN ++TL+ G C+
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCK 259
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKIT 319
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A E +MI E + V+Y LI GLC + D + +L++M+
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 366 QQGFVPRMGMWREIV 380
G P + I+
Sbjct: 380 NVGLKPDARTYTMII 394
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 110/211 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 210 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEI 269
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++ L++ M +G+ D +T+ LI G K
Sbjct: 270 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCK 329
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + ++M + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 330 EGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDART 389
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 117/260 (45%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 209 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV--PNGVIFTTLIDGHCKNGRVDLA 266
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 267 MEIYKQMLSQSLLPDLITYN-----------------------------------TLIYG 291
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ +++DE + +P+ TY+TL+ G C++G+++ AF ++M E I D
Sbjct: 292 LCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLD 351
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G P++ +Y ++ K + +L+
Sbjct: 352 EVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLK 411
Query: 328 RMICERMSPSFVSYKKLIHG 347
M + PS V+Y L++G
Sbjct: 412 EMQRDGHVPSVVTYNVLMNG 431
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 159/309 (51%), Gaps = 12/309 (3%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
LRD + V++++ +R PN + I+ +A R + ++R++V +
Sbjct: 257 QLRDALKVLTLM----QRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGI--VP 310
Query: 127 DGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
+ YN +I+ Y ++ R+ +AIE L DM S C P ++ ++ L K E++ +
Sbjct: 311 NVVTYNCMIRGYCDLH-RVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDL 369
Query: 186 YTSAAK-LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
AK G+ D N L+ L ++ + + A + L + ++ + YS ++H LC
Sbjct: 370 MKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALC 429
Query: 245 EKGNVEEAFGLLERMESEG-IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
++G + EA L+ M S+G D VT+ +++G + G+V++ KLL+ M G PN+
Sbjct: 430 KEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNT 489
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLK 362
SY +L G+ + EA+E++ SP+ ++Y ++HGL + KL E D V++
Sbjct: 490 VSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACD-VVR 548
Query: 363 KMVQQGFVP 371
+MV +GF P
Sbjct: 549 EMVLKGFFP 557
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 143/332 (43%), Gaps = 38/332 (11%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+ V ++ + +K P++ Y +I+ L + D ++ + EK R D Y
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQ-EKGFRI-DKLGY 421
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
+ I GR+S+A + + +M S +C P V T+ V+N + + +
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMH 481
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G + + LL G+C G A +++ + PN TYS +MHGL +G +
Sbjct: 482 THGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLS 541
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA ++ M +G V N+L+ L + G+ E K +E KGC N ++ V+
Sbjct: 542 EACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVI 601
Query: 311 YG------------LLD-----------------------KKRFPEAKELVGRMICERMS 335
+G +LD K R EA EL+ +M+ + +
Sbjct: 602 HGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGID 661
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
P+ V+Y+ +IH C V+D+ +L+KM+ +
Sbjct: 662 PTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G L A VL + EPN+ +T + +E+A LERM+ GI + VT+
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N +I G +VEE ++LLE M KGC P+ SY ++ L +KR E ++L+ +M
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Query: 332 ER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
E + P V+Y LIH L ++ W LK ++GF
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGF 414
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 5/277 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ T V+ F L + + L Q + PN YT ++N + + + ++
Sbjct: 453 DVVTYTAVVNGFCRLGE-VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
M E+ + Y+VI G++S+A + + +M +P NL+L L
Sbjct: 512 MN--MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSL 569
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
E + G I+ ++ G C+N L+AA VLD+ N +V
Sbjct: 570 CRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADV 629
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY+TL+ L +KG + EA L+++M +GID VT+ +I + GKV++ + +LE+
Sbjct: 630 FTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEK 689
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
M + Y +V+ L + EA L+G+++
Sbjct: 690 MISR--QKCRTIYNQVIEKLCVLGKLEEADTLLGKVL 724
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 96/240 (40%), Gaps = 40/240 (16%)
Query: 172 LLVSAKLYGEIQG---IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
++VS G+++ + T + GVE + N + LE A L+
Sbjct: 248 VMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVG 307
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE-------------------------- 262
PNV TY+ ++ G C+ VEEA LLE M S+
Sbjct: 308 IVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVR 367
Query: 263 ----------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
G+ D VT+N LI L K +E + L+ + KG + Y +++
Sbjct: 368 DLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHA 427
Query: 313 LLDKKRFPEAKELVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L + R EAK+L+ M+ + P V+Y +++G C V+ +L+ M G P
Sbjct: 428 LCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKP 487
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
+S +M G + +A +L M+ G++ + + N I + ++E+ ++ LERM
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+ G PN +Y ++ G D R EA EL+ M + P VSY ++ LC +K +
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 355 EDVDWVLKKMVQQ-GFVPRMGMWREIVGCVT 384
+V ++KKM ++ G VP + ++ +T
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLT 394
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 8/207 (3%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
+T +I+ Q DA ++ + + + + +D F Y + GRI++A E +
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYL--INKHADVFTYTTLVDTLGKKGRIAEATELMKK 654
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC--CLNILLKGLCEN 211
M P+ T+ V++ G++ + K+ + C N +++ LC
Sbjct: 655 MLHKGIDPTPVTYRTVIHRYCQ---MGKVDDLVAILEKM-ISRQKCRTIYNQVIEKLCVL 710
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G LE A +L + + + +T LM G +KG A+ + RM + + D
Sbjct: 711 GKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMC 770
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKG 298
L L +GKV+E KL+ R+ +G
Sbjct: 771 EKLSKRLVLKGKVDEADKLMLRLVERG 797
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
FY D + +P V Y +++ L + + + +L M+ GI F+ ++
Sbjct: 194 FYWADRQWRYRHDPMV--YYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVS 251
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
+ G++ + +K+L M+ G PN + + R +A + RM + P+
Sbjct: 252 YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPN 311
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
V+Y +I G C+ VE+ +L+ M +G +P + I+G
Sbjct: 312 VVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMG 355
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 109/278 (39%), Gaps = 37/278 (13%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQR--------------IKVEKLCR-------- 124
++PN Y++I++ L + + D+++ + ++ LCR
Sbjct: 520 WSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEAR 579
Query: 125 ------FSDGFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ G NV+ + G + A+ L DM N V T+ +++ L
Sbjct: 580 KFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL 639
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF-PKQNCEPN 232
E + G++ ++ C+ G ++ +L++ +Q C
Sbjct: 640 GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRT- 698
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
Y+ ++ LC G +EEA LL ++ +D T L+ G K+G K+
Sbjct: 699 --IYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVAC 756
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
RM + P+ +++ L+ K + EA +L+ R++
Sbjct: 757 RMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLV 794
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 111/230 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA +M P+ T+N +L+ S+ E GI+ + GVE D
Sbjct: 220 GQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTY 279
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ LC+NG A V D K+ +P+ Y TL+HG +G + + LL+ M
Sbjct: 280 NTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVR 339
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D FNILI K G V+E M +M+ +G +PN +Y V+ L + +
Sbjct: 340 NGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDD 399
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A R+I E ++P+ V ++ LIHGLC + + + +M+ +G P
Sbjct: 400 AMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICP 449
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 110/236 (46%), Gaps = 5/236 (2%)
Query: 143 RISKAIE-TLFDMPSYNCWPSVKTFNLVLNLLV----SAKLYGEIQGIYTSAAKLGVEID 197
R S A++ L MP+ C P+ ++N++L L S + + + + G D
Sbjct: 146 RTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPD 205
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
++ GL G L+ A+ + DE Q PN TY+ L+HG C G +EA G+
Sbjct: 206 VVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFR 265
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+M +G++ D VT+N L+ L K G+ E K+ + M KG P+S+ Y +L+G +
Sbjct: 266 KMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEG 325
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ +L+ M+ P + LI +V++ KM QQG P +
Sbjct: 326 YLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNI 381
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 14/279 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM--- 140
R P+ ++ ++I A+ D E ++ K+ + G N++ YG +
Sbjct: 339 RNGTQPDHYIFNILIGAYAKHGMVD--EAMLAFSKMRQ-----QGLHPNIVT-YGTVMDA 390
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
G++ A+ + S P+ F +++ L + + + + + G+ +
Sbjct: 391 LCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPN 450
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N LL LC+ G + A + D + + + +V TY+TL+ G C G V+EA LLE
Sbjct: 451 TIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLE 510
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M +G+ + VT+N +I+G K G++E+ L +M KG P Y +L+GL +
Sbjct: 511 GMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTR 570
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
R AKEL MI + +Y ++ GLC +D
Sbjct: 571 RIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDD 609
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 3/263 (1%)
Query: 121 KLCRFS---DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
K+CR D YN + +Y GR +A + M P + +L+ +
Sbjct: 266 KMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEG 325
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
++ + + G + D NIL+ ++G ++ A + +Q PN+ TY
Sbjct: 326 YLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYG 385
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
T+M LC G V++A +R+ SEG+ + V F LI GL K ++ +L M G+
Sbjct: 386 TVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGR 445
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G PN+ + +L L + AK + M+ + ++Y LI G C V++
Sbjct: 446 GICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEA 505
Query: 358 DWVLKKMVQQGFVPRMGMWREIV 380
+L+ MV G P + I+
Sbjct: 506 TKLLEGMVLDGVKPNEVTYNTII 528
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 99/194 (51%), Gaps = 4/194 (2%)
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEF----PKQNCEPNVRTYSTLMHGLCEKG 247
LG +A NILLKGLC+ + A ++L + C P+V +Y+T+++GL +G
Sbjct: 161 LGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREG 220
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++A+ L + M +G+ + +T+N L+ G GK +E + + +M G P+ +Y
Sbjct: 221 QLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYN 280
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ L R EA+++ M+ + P Y L+HG + + + +L MV+
Sbjct: 281 TLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRN 340
Query: 368 GFVPRMGMWREIVG 381
G P ++ ++G
Sbjct: 341 GTQPDHYIFNILIG 354
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 128/300 (42%), Gaps = 8/300 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAK---RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
+K + P+ ++Y +++ A + + D+M R + D + +N++
Sbjct: 304 KKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQ-----PDHYIFNILIGAYAK 358
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + +A+ M P++ T+ V++ L + + G+ +
Sbjct: 359 HGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVV 418
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ GLC + A + E + PN ++TL++ LC++G V A + + M
Sbjct: 419 FRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMV 478
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ D +T+ LI G GKV+E KLLE M G PN +Y ++ G R
Sbjct: 479 RVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIE 538
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A L +M + ++P V Y ++HGL + + + M++ G +G + I+
Sbjct: 539 DACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIIL 598
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 5/180 (2%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL- 255
D C +I++ G+L+ AF L + T+S L+ GLC +A +
Sbjct: 95 DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIA 154
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK----GCYPNSASYQEVLY 311
L RM + G + ++NIL+ GL + + ++ + LL M GC P+ SY V+
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
GLL + + +A L M+ + MSP+ ++Y L+HG C+ ++ + +KM + G P
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 132/295 (44%), Gaps = 4/295 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN ++ +I+ L ++D E++ + +C + F+N + + G +++A
Sbjct: 413 TPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGIC--PNTIFFNTLLNHLCKEGMVTRA 470
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
+ +FD M + V T+ +++ E + GV+ + N ++
Sbjct: 471 -KNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIIN 529
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C+NG +E A + + + P + YST++HGL + + A L M GI
Sbjct: 530 GYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKL 589
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
T+NI++ GL + ++ +++ + + + ++ ++ LL R EAK+L
Sbjct: 590 PIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLF 649
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
++ + P+ V+Y ++ L Q L+E++D + + + G M +VG
Sbjct: 650 ASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVG 704
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 36/215 (16%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GRI A M S P + ++ +L+ L + + +Y K G+++
Sbjct: 535 GRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTY 594
Query: 202 NILLKGLCENGNLEAAFYV-----LDEFPKQN---------------------------- 228
NI+L+GLC+N + A + L +F QN
Sbjct: 595 NIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLA 654
Query: 229 --CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
PNV TY +M L E+G +EE L +E G AD+ N L+ L ++G+V +
Sbjct: 655 RGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRK 714
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
L ++ + + AS E L L+ ++ +
Sbjct: 715 AGVYLSKID-ENNFSLEASTAESLVFLVSSGKYDQ 748
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 135/276 (48%), Gaps = 2/276 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
YT +IN L +A E ++Q ++ + L D Y V+ G++++A
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGL--DVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P+V T+ + + L + G+E++ N L+ GLC+ GN
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
LE A + + + +P+V TY+T++ LC+ ++ A LL+ M +GI VT+N+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L++G G+VE G +LLE M K +PN+ +Y ++ +K E+ M+ +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ P+ +Y LI G C + +++ + +M+++GF
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 112/216 (51%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+ ++N L A E + + G+++DA +L+ G C+ G + AF V ++
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
++ PNV TY+ L GLC++G+V A LL M S+G++ + T+N LI+GL K G +
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
E+ M+ + M G P+ +Y ++ L K A L+ M+ + + P+ V+Y L
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVL 571
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++G C VE +L+ M+++ P + ++
Sbjct: 572 MNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 142/313 (45%), Gaps = 8/313 (2%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKAI 148
N Y +++ L A R I+D Q +++ D Y ++ ++G + AI
Sbjct: 252 NTCSYNILLKALCTAGR---IKDAHQLF--DEMASPPDVVTYGIM-VHGYCTLSELETAI 305
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M + + + V+ LL + + GV +DA ++ G
Sbjct: 306 KLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGF 365
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G+L AA DE K+ + TY+ L++GLC G ++EA +L+ ME +G+D D
Sbjct: 366 CRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ +LI G K GK+ E + +M K PN +Y + GL + A EL+
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
M + + + +Y LI+GLC +E + M + G P + + I+G + K+
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 389 -NRNRVYVTETVD 400
+R + E +D
Sbjct: 546 LDRAHSLLQEMLD 558
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 17/222 (7%)
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLV---SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L + Y PS ++ N VL L + +L+ E+ E + C NILLK
Sbjct: 214 LLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELP-----------EKNTCSYNILLKA 262
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC G ++ A + DE P+V TY ++HG C +E A LL M + G++ +
Sbjct: 263 LCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELN 319
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + +I+ L +G+V + ++++E M G ++A + V+ G K A+
Sbjct: 320 PVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFD 379
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
M ++ V+Y LI+GLC +++ + VL++M +G
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL 421
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 2/252 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K PN YT + + L + A +++ + + L + F YN + AG
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL--ELNIFTYNSLINGLCKAGN 510
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+ T+ DM P V T+ ++ L +K + G++ N+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C +G +E +L+ ++N PN TY++LM C + N++ + + M S+
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + T+NILI G K ++E + M KG ++SY ++ L KK+F EA+
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690
Query: 324 ELVGRMICERMS 335
L +M ER++
Sbjct: 691 RLFEKMRKERLT 702
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 9/252 (3%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A E L +M S ++ T+N ++N L A + + G++ D
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++ LC++ L+ A +L E + +P + TY+ LM+G C G VE LLE M
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE 593
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMK----LLERMKGKGCYPNSASYQEVLYGLLDKK 317
+ I +T T+N L+ KQ +E+ MK + + M + PN +Y ++ G +
Sbjct: 594 KNIHPNTTTYNSLM----KQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
EA MI + + SY LI L +K + + +KM ++ ++
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYN 709
Query: 378 EIVGCVTFGKDN 389
+ ++F +DN
Sbjct: 710 FYID-LSFNEDN 720
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 2/206 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT II L Q+K D ++Q + ++K + + YNV+ M+GR+
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEM-LDKGIKPTI-VTYNVLMNGFCMSGRVEGGK 585
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M N P+ T+N ++ K IY V + NIL+KG
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGH 645
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ N++ A Y E ++ +Y+ L+ L +K EA L E+M E + A+
Sbjct: 646 CKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEP 705
Query: 269 VTFNILISGLRKQGKVEEGMKLLERM 294
+N I + +E + L + +
Sbjct: 706 DVYNFYIDLSFNEDNLESTLALCDEL 731
>gi|224054128|ref|XP_002298105.1| predicted protein [Populus trichocarpa]
gi|222845363|gb|EEE82910.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 134/285 (47%), Gaps = 9/285 (3%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
RDP + ++ ++ K N + +++LA A RFD IE +++ K R +G
Sbjct: 50 RDPEKLFNLFKANAENKLVVENRFAFEDTVSRLAGANRFDYIEHLLEHQKTLPQGR-REG 108
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+ +I +YG AG I AI+T +M C +VK+FN L +L + I+
Sbjct: 109 YMVRIIMLYGK-AGMIEHAIDTFHNMHLRGCKRTVKSFNAALKVLTGTRDLATIETFVNE 167
Query: 189 AAK-LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
A K +E D +NI++K LCE G L+ ++ ++ E K P+V TY+TL +
Sbjct: 168 APKKFDIEFDIFSVNIIVKALCERGVLDKSYLLMVEMEKSGVTPDVITYTTLTSAYYKNN 227
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILIS---GLRKQGKVEEGMKLLERMKGKGCYPNSA 304
E GL M +G + TFN+ I +R+ + M+L++++ G P+
Sbjct: 228 KAEIGNGLWNLMVLKGCLPNLATFNVRIQYLVNIRRAWHANDVMRLMQKI---GIVPDEV 284
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
SY VL G AK + + C+ + Y+ ++H LC
Sbjct: 285 SYNLVLKGFFQVGNLEMAKLVYFSLRCKGHKFNVKVYQTMVHYLC 329
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 9/254 (3%)
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK 121
LK+ + RD ++ + +N+ K+ D + +I+ L + D +M +++EK
Sbjct: 149 LKVLTGTRDLATIETFVNEAPKKFDIEFDIFSVNIIVKALCERGVLDKSYLLM--VEMEK 206
Query: 122 LCRFSDGFFYNVIK--IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
D Y + Y N I + L M C P++ TFN+ + LV+ +
Sbjct: 207 SGVTPDVITYTTLTSAYYKNNKAEIGNGLWNL--MVLKGCLPNLATFNVRIQYLVNIRRA 264
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ K+G+ D N++LKG + GNLE A V + + NV+ Y T+
Sbjct: 265 WHANDVMRLMQKIGIVPDEVSYNLVLKGFFQVGNLEMAKLVYFSLRCKGHKFNVKVYQTM 324
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-G 298
+H LC+ G + A+ + + T + L+ GL+K G++ + +L + +
Sbjct: 325 VHYLCKGGEFDLAYTMCRDCMRTNWFLNVDTIHTLLEGLKKNGQLNKAKVILTLAQRRVP 384
Query: 299 CYPNS--ASYQEVL 310
+P+S +S Q VL
Sbjct: 385 PFPSSHLSSMQAVL 398
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 135/276 (48%), Gaps = 2/276 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
YT +IN L +A E ++Q ++ + L D Y V+ G++++A
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGL--DVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P+V T+ + + L + G+E++ N L+ GLC+ GN
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
LE A + + + +P+V TY+T++ LC+ ++ A LL+ M +GI VT+N+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L++G G+VE G +LLE M K +PN+ +Y ++ +K E+ M+ +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ P+ +Y LI G C + +++ + +M+++GF
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 112/216 (51%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+ ++N L A E + + G+++DA +L+ G C+ G + AF V ++
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
++ PNV TY+ L GLC++G+V A LL M S+G++ + T+N LI+GL K G +
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
E+ M+ + M G P+ +Y ++ L K A L+ M+ + + P+ V+Y L
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVL 571
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++G C VE +L+ M+++ P + ++
Sbjct: 572 MNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 142/313 (45%), Gaps = 8/313 (2%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKAI 148
N Y +++ L A R I+D Q +++ D Y ++ ++G + AI
Sbjct: 252 NTCSYNILLKALCTAGR---IKDAHQLF--DEMASPPDVVTYGIM-VHGYCTLSELETAI 305
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M + + + V+ LL + + GV +DA ++ G
Sbjct: 306 KLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGF 365
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G+L AA DE K+ + TY+ L++GLC G ++EA +L+ ME +G+D D
Sbjct: 366 CRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ +LI G K GK+ E + +M K PN +Y + GL + A EL+
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
M + + + +Y LI+GLC +E + M + G P + + I+G + K+
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 389 -NRNRVYVTETVD 400
+R + E +D
Sbjct: 546 LDRAHSLLQEMLD 558
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 17/222 (7%)
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLV---SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L + Y PS ++ N VL L + +L+ E+ E + C NILLK
Sbjct: 214 LLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELP-----------EKNTCSYNILLKA 262
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC G ++ A + DE P+V TY ++HG C +E A LL M + G++ +
Sbjct: 263 LCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELN 319
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + +I+ L +G+V + ++++E M G ++A + V+ G K A+
Sbjct: 320 PVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFD 379
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
M ++ V+Y LI+GLC +++ + VL++M +G
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL 421
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 2/252 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K PN YT + + L + A +++ + + L + F YN + AG
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL--ELNIFTYNSLINGLCKAGN 510
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+ T+ DM P V T+ ++ L +K + G++ N+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C +G +E +L+ ++N PN TY++LM C + N++ + + M S+
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + T+NILI G K ++E + M KG ++SY ++ L KK+F EA+
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690
Query: 324 ELVGRMICERMS 335
L +M +R++
Sbjct: 691 RLFEKMRKDRLT 702
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 9/252 (3%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A E L +M S ++ T+N ++N L A + + G++ D
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++ LC++ L+ A +L E + +P + TY+ LM+G C G VE LLE M
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE 593
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMK----LLERMKGKGCYPNSASYQEVLYGLLDKK 317
+ I +T T+N L+ KQ +E+ MK + + M + PN +Y ++ G +
Sbjct: 594 KNIHPNTTTYNSLM----KQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
EA MI + + SY LI L +K + + +KM + ++
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYN 709
Query: 378 EIVGCVTFGKDN 389
+ ++F +DN
Sbjct: 710 FYID-LSFNEDN 720
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 2/206 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT II L Q+K D ++Q + ++K + + YNV+ M+GR+
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEM-LDKGIKPTI-VTYNVLMNGFCMSGRVEGGK 585
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M N P+ T+N ++ K IY V + NIL+KG
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGH 645
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ N++ A Y E ++ +Y+ L+ L +K EA L E+M + + A+
Sbjct: 646 CKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEP 705
Query: 269 VTFNILISGLRKQGKVEEGMKLLERM 294
+N I + +E + L + +
Sbjct: 706 DVYNFYIDLSFNEDNLESTLALCDEL 731
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 155/307 (50%), Gaps = 11/307 (3%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
LR+ + V++++ ++ P+ ++ I L + + + ++R++V + D
Sbjct: 251 LRNALRVLTLM----QKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGI--KPD 304
Query: 128 GFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
YN +IK Y ++ RI A+E + +PS C P ++ V+ L K E++ +
Sbjct: 305 IVTYNSLIKGYCDL-NRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLM 363
Query: 187 TSAA-KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ D N L+ L ++G+ + A L E + + YS ++H C+
Sbjct: 364 EKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQ 423
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
KG ++EA L+ M S G + D VT+ ++ G + G+++E K+L++M GC PN+ S
Sbjct: 424 KGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVS 483
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKM 364
Y +L GL + EA+E++ +P+ ++Y ++HGL + KL E D + ++M
Sbjct: 484 YTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACD-LTREM 542
Query: 365 VQQGFVP 371
V++GF P
Sbjct: 543 VEKGFFP 549
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 141/295 (47%), Gaps = 16/295 (5%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
V++ YS+ NP+ YT I++ + R D + I+Q++ + G N +
Sbjct: 434 VIDMYSR--GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQM-------YKHGCKPNTVSY 484
Query: 137 YGNMAG--RISKAIET--LFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ G K++E + ++ + W P+ T+ V++ L E + +
Sbjct: 485 TALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVE 544
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G +N+L++ LC+N + A L+E + C NV ++T++HG C+ G++E
Sbjct: 545 KGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEA 604
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A +L+ M G D VT+ L L K+G+++E +L+ +M KG P +Y+ V++
Sbjct: 605 ALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIH 664
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
R + L+ +M+ + P Y ++I LC+ +E+ + +L K+++
Sbjct: 665 RYSQWGRVDDMLNLLEKML--KRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLR 717
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 4/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGRISKA 147
P++ Y +I+ L++ D D + +K + F D Y+ I GR+ +A
Sbjct: 374 PDQVTYNTLIHMLSKHGHAD---DALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEA 430
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ DM S C P V T+ +++ E + I K G + + LL G
Sbjct: 431 KSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNG 490
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC +G A +++ + PN TY +MHGL +G + EA L M +G
Sbjct: 491 LCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPT 550
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V N+LI L + KV E K LE KGC N ++ V++G A ++
Sbjct: 551 PVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLD 610
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M P V+Y L L + +++ ++ KM+ +G P +R ++
Sbjct: 611 DMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVI 663
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
+L++L KL + + + G+E ++ G L A VL K
Sbjct: 206 MLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAG 265
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
EP++ +T ++ L + G +E+A LERM+ GI D VT+N LI G ++E+ +
Sbjct: 266 VEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDAL 325
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC-ERMSPSFVSYKKLIHG 347
+L+ + KGC P+ SY V+ L +K+ E K L+ +M+ + P V+Y LIH
Sbjct: 326 ELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHM 385
Query: 348 LCNQKLVEDVDWVLKKMVQQGF 369
L +D LK+ +GF
Sbjct: 386 LSKHGHADDALAFLKEAQDKGF 407
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 144/355 (40%), Gaps = 48/355 (13%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQA-KRFDAIED 112
D ++ T ++ F L +L Q K PN YT ++N L + K +A E
Sbjct: 445 DVVTYTAIVDGFCRLGRIDEAKKILQQMYKH-GCKPNTVSYTALLNGLCHSGKSLEAREM 503
Query: 113 IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
I E+ + Y + G++S+A + +M +P+ NL++
Sbjct: 504 INVS---EEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 560
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
L + E + G I+ ++ G C+ G++EAA VLD+ P+
Sbjct: 561 LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPD 620
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF-----------------NILI 275
TY+ L L +KG ++EA L+ +M S+G+D VT+ N+L
Sbjct: 621 AVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLE 680
Query: 276 SGLRKQ----------------GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
L++Q G +EE KLL ++ ++ + ++ L K
Sbjct: 681 KMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVA 740
Query: 320 PEAKELVGRMICERMSPSF-----VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A ++ RM ++P VS K ++ G KLVE D ++ + V++G
Sbjct: 741 ISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDG----KLVE-ADNLMLRFVERGI 790
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
FY D + + P V Y T++ L + + A +L M GI+ F ++
Sbjct: 187 FYWADRQWRYSHHPVV--YYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVS 244
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
+ GK+ +++L M+ G P+ + +Y L+ + +A + + RM + P
Sbjct: 245 YSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPD 304
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
V+Y LI G C+ +ED ++ + +G P + ++G
Sbjct: 305 IVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMG 348
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 113/285 (39%), Gaps = 8/285 (2%)
Query: 50 LNHKDWLSPTEVL--KIFSNLR--DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAK 105
++ + W +P + + LR +S L + K + P L+I L Q +
Sbjct: 506 VSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQ 565
Query: 106 RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKT 165
+ + ++ + K C + F VI + + G + A+ L DM P T
Sbjct: 566 KVVEAKKYLEEC-LNKGCAINVVNFTTVIHGFCQI-GDMEAALSVLDDMYLSGKHPDAVT 623
Query: 166 FNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP 225
+ + + L E + G++ ++ + G ++ +L++
Sbjct: 624 YTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKML 683
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
K+ +P Y+ ++ LC+ GN+EEA LL ++ D T ++L+ K+G
Sbjct: 684 KR--QPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAI 741
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
K+ RM + P+ ++V L+ + EA L+ R +
Sbjct: 742 SAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFV 786
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 135/276 (48%), Gaps = 2/276 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
YT +IN L +A E ++Q ++ + L D Y V+ G++++A
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGL--DVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P+V T+ + + L + G+E++ N L+ GLC+ GN
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
LE A + + + +P+V TY+T++ LC+ ++ A LL+ M +GI VT+N+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L++G G+VE G +LLE M K +PN+ +Y ++ +K E+ M+ +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ P+ +Y LI G C + +++ + +M+++GF
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 112/216 (51%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+ ++N L A E + + G+++DA +L+ G C+ G + AF V ++
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
++ PNV TY+ L GLC++G+V A LL M S+G++ + T+N LI+GL K G +
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
E+ M+ + M G P+ +Y ++ L K A L+ M+ + + P+ V+Y L
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVL 571
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++G C VE +L+ M+++ P + ++
Sbjct: 572 MNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 142/313 (45%), Gaps = 8/313 (2%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKAI 148
N Y +++ L A R I+D Q +++ D Y ++ ++G + AI
Sbjct: 252 NTCSYNILLKALCTAGR---IKDAHQLF--DEMASPPDVVTYGIM-VHGYCTLSELETAI 305
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M + + + V+ LL + + GV +DA ++ G
Sbjct: 306 KLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGF 365
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G+L AA DE K+ + TY+ L++GLC G ++EA +L+ ME +G+D D
Sbjct: 366 CRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ +LI G K GK+ E + +M K PN +Y + GL + A EL+
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
M + + + +Y LI+GLC +E + M + G P + + I+G + K+
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 389 -NRNRVYVTETVD 400
+R + E +D
Sbjct: 546 LDRAHSLLQEMLD 558
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 17/222 (7%)
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLV---SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L + Y PS ++ N VL L + +L+ E+ E + C NILLK
Sbjct: 214 LLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELP-----------EKNTCSYNILLKA 262
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC G ++ A + DE P+V TY ++HG C +E A LL M + G++ +
Sbjct: 263 LCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELN 319
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + +I+ L +G+V + ++++E M G ++A + V+ G K A+
Sbjct: 320 PVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFD 379
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
M ++ V+Y LI+GLC +++ + VL++M +G
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL 421
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 2/252 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K PN YT + + L + A +++ + + L + F YN + AG
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL--ELNIFTYNSLINGLCKAGN 510
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+ T+ DM P V T+ ++ L +K + G++ N+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C +G +E +L+ ++N PN TY++LM C + N++ + + M S+
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + T+NILI G K ++E + M KG ++SY ++ L KK+F EA+
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690
Query: 324 ELVGRMICERMS 335
L +M ER++
Sbjct: 691 RLFEKMRKERLT 702
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 9/252 (3%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A E L +M S ++ T+N ++N L A + + G++ D
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++ LC++ L+ A +L E + +P + TY+ LM+G C G VE LLE M
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE 593
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMK----LLERMKGKGCYPNSASYQEVLYGLLDKK 317
+ I +T T+N L+ KQ +E+ MK + + M + PN +Y ++ G +
Sbjct: 594 KNIHPNTTTYNSLM----KQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
EA MI + + SY LI L +K + + +KM ++ ++
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYN 709
Query: 378 EIVGCVTFGKDN 389
+ ++F +DN
Sbjct: 710 FYID-LSFNEDN 720
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 2/206 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT II L Q+K D ++Q + ++K + + YNV+ M+GR+
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEM-LDKGIKPTI-VTYNVLMNGFCMSGRVEGGK 585
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M N P+ T+N ++ K IY V + NIL+KG
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGH 645
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ N++ A Y E ++ +Y+ L+ L +K EA L E+M E + A+
Sbjct: 646 CKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEP 705
Query: 269 VTFNILISGLRKQGKVEEGMKLLERM 294
+N I + +E + L + +
Sbjct: 706 DVYNFYIDLSFNEDNLESTLALCDEL 731
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PNE + +I+ + + A ++ + ++ + L + YN + + G++ +AI
Sbjct: 271 PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLK--PNIVTYNSLINGLSNNGKLDEAI 328
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M P++ TFN ++N K+ E + ++ A+ + +A N ++
Sbjct: 329 ALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAF 388
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G +E F + + + PNV TY+ L+ GLC NV A LL ME+ + AD
Sbjct: 389 CKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADV 448
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+NILI G K G+ + KLL M G PN +Y ++ G + A ++ +
Sbjct: 449 VTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQ 508
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M E + V+Y LI G C +ED + +L +M+++G P
Sbjct: 509 MEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNP 551
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 3/232 (1%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
I A E + Y S+ + N +L+ LV GE+Q +Y K ++ + N
Sbjct: 145 EIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFN 204
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF---GLLERM 259
I + GLC+ G L A V+++ PN+ TY+TL+ G C+KG+ + + +L+ M
Sbjct: 205 IFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEM 264
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ I + +TFN LI G K V E M+ +G PN +Y ++ GL + +
Sbjct: 265 LANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKL 324
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA L +M+ + P+ V++ LI+G C +K++++ + + +Q VP
Sbjct: 325 DEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVP 376
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 144/304 (47%), Gaps = 31/304 (10%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM--- 140
++ PN + + IN L +A + + ED+++ IK + GF N++ Y +
Sbjct: 193 KRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIK-------AWGFSPNIV-TYNTLIDG 244
Query: 141 ------AGRISKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYT 187
AG++ +A L +M + P+ TFN ++ N+L + + E+Q
Sbjct: 245 HCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQ---- 300
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ G++ + N L+ GL NG L+ A + D+ +PN+ T++ L++G C+K
Sbjct: 301 ---RQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKK 357
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++EA L + + + + + +TFN +I K G +EEG L M +G +PN ++Y
Sbjct: 358 MIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYN 417
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ GL + AK+L+ M + V+Y LI G C + +L +M+
Sbjct: 418 CLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNV 477
Query: 368 GFVP 371
G P
Sbjct: 478 GVKP 481
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 110/224 (49%), Gaps = 3/224 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN---LEAA 217
P++ TFN+ +N L A + + + G + N L+ G C+ G+ + A
Sbjct: 198 PNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRA 257
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+L E PN T++TL+ G C+ NV A E M+ +G+ + VT+N LI+G
Sbjct: 258 DAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLING 317
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L GK++E + L ++M G G PN ++ ++ G KK EA++L + + + P+
Sbjct: 318 LSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPN 377
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+++ +I C ++E+ + M+ +G P + + ++
Sbjct: 378 AITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIA 421
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 16/240 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + +IN + K + I + L + +N + AG + +
Sbjct: 341 PNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLV--PNAITFNTMIDAFCKAGMMEEGF 398
Query: 149 ETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
M +P+V T+N ++ N+ + KL E++ A D
Sbjct: 399 ALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKA-------DVVTY 451
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ G C++G A +L E +PN TY+TLM G C +GN++ A + +ME
Sbjct: 452 NILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEK 511
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EG A+ VT+N+LI G K GK+E+ +LL M KG PN +Y V +L+K P+
Sbjct: 512 EGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPD 571
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 101/239 (42%), Gaps = 20/239 (8%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAK------------LGVEIDACCLNILLKGL- 208
++T VL+LL ++K Y +++ K L + D C N L+ +
Sbjct: 77 GLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDML 136
Query: 209 ----CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
N + +A V + ++ + + L+ L + E + + M I
Sbjct: 137 VLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRI 196
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK---KRFPE 321
+ TFNI I+GL K GK+ + ++E +K G PN +Y ++ G K +
Sbjct: 197 QPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYR 256
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ++ M+ ++ P+ +++ LI G C + V ++M +QG P + + ++
Sbjct: 257 ADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLI 315
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 4/174 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + Y +I L + + A + ++ ++ +L +D YN++ G SKA
Sbjct: 411 PNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELK--ADVVTYNILIGGWCKDGEPSKAE 468
Query: 149 ETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L +M + P+ T+N +++ + L ++ + T K G + N+L+KG
Sbjct: 469 KLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALK-VRTQMEKEGKRANVVTYNVLIKG 527
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
C+ G LE A +L+E ++ PN TY + + EKG + + G L + S
Sbjct: 528 FCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIEGHLYNISS 581
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + ++ PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 121/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ + G + A V D K + P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M++ G+ D T+++LI+GL K+ K+++ +L + M G PN ++
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 134/272 (49%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQS-VFDAITKWSLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G++P
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K + N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + P+ +Y ++YGL K +A++L+ M + + P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV--PNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ GLC++G +A +L M S G+ +
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
T+ ++I+ K+G V G KLL+ M+ G P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 133/283 (46%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + ++N + +A R + + + E L DG YN + G +A+
Sbjct: 225 PNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLA--PDGVSYNTLVGGYCKVGCSHEAL 282
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M P V TF +++++ A G+ + G++++ L+ G
Sbjct: 283 SVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGF 342
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G L+ A + E + +P+V Y+ L++G C G ++EA L+ ME++G+ D
Sbjct: 343 CKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDV 402
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ ++S K G +L ++M G P++ +Y ++ L ++KR +A L
Sbjct: 403 VTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKN 462
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
MI + P V+Y LI G C + VE + +MV+ G +P
Sbjct: 463 MISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLP 505
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 2/242 (0%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN + AG + +A E L DM P++ TFN V+N + A + + ++
Sbjct: 195 YNTLVAAFCRAGEVDRA-ERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEM 253
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
K G+ D N L+ G C+ G A V E ++ P+V T+++L+H +C+ GN+
Sbjct: 254 VKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNL 313
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E A GL+ M G+ + +TF LI G K+G +++ + + M+ P+ Y +
Sbjct: 314 ERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNAL 373
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ G R EA+ELV M + + P V+Y ++ C + ++M++ G
Sbjct: 374 INGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV 433
Query: 370 VP 371
+P
Sbjct: 434 LP 435
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 121/261 (46%), Gaps = 5/261 (1%)
Query: 125 FSDG-----FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
SDG + YN++ G +A+ L DM C P+ T+N ++ A
Sbjct: 149 LSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEV 208
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ + + G++ + N ++ G+C+ G +E A V DE K+ P+ +Y+TL
Sbjct: 209 DRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTL 268
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ G C+ G EA + M +GI D VTF LI + K G +E + L+ M+ +G
Sbjct: 269 VGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGL 328
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
N ++ ++ G K +A V M R+ PS V Y LI+G C +++
Sbjct: 329 QMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARE 388
Query: 360 VLKKMVQQGFVPRMGMWREIV 380
++++M +G P + + I+
Sbjct: 389 LVREMEAKGVKPDVVTYSTIL 409
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 134/287 (46%), Gaps = 3/287 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK P+ +T +I+ + +A + +++ ++ E+ + ++ F +I + G
Sbjct: 290 RKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMR-ERGLQMNEITFTALIDGFCK-KGF 347
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ + +M PSV +N ++N E + + GV+ D +
Sbjct: 348 LDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYST 407
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L C+NG+ +AF + + + P+ TYS+L+ LCE+ + +A L + M S G
Sbjct: 408 ILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG 467
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D VT+ LI G K+G VE + L + M G P+ +Y ++ GL R EA+
Sbjct: 468 LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQ 527
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
L+ ++ E P+ + Y L+ C ++ V +LK +G +
Sbjct: 528 RLLFKLYHEEPVPANIKYDALMR-CCRNAELKSVLALLKGFCMKGLM 573
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 116/249 (46%), Gaps = 2/249 (0%)
Query: 151 LFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
FD M S P+V T+N+++ L E + G + +A N L+ C
Sbjct: 144 FFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFC 203
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
G ++ A ++D + +PN+ T++++++G+C+ G +E+A + + M EG+ D V
Sbjct: 204 RAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGV 263
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
++N L+ G K G E + + M KG P+ ++ +++ + A LV M
Sbjct: 264 SYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREM 323
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKD 388
+ + +++ LI G C + ++D +++M Q P + + ++ G G+
Sbjct: 324 RERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRM 383
Query: 389 NRNRVYVTE 397
+ R V E
Sbjct: 384 DEARELVRE 392
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P+V Y+ ++ L + ++ A + M S+G+ + T+NIL+ L +G +E + +
Sbjct: 121 PSVLAYNAVLLALSD-ASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L M+G GC PN+ +Y ++ A+ LV M + P+ V++ +++G+C
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ED V +MV++G P + +VG
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVG 270
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 132/334 (39%), Gaps = 54/334 (16%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +IN R D ++++ ++ + + D Y+ I G A
Sbjct: 365 PSVVCYNALINGYCMVGRMDEARELVREMEAKGV--KPDVVTYSTILSAYCKNGDTHSAF 422
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M P T++ ++ +L K G+ ++ + LG++ D L+ G
Sbjct: 423 QLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGH 482
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL------------------------- 243
C+ GN+E A + DE K P+V TYS L++GL
Sbjct: 483 CKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPAN 542
Query: 244 -------------------------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
C KG + EA + + + + D +++LI G
Sbjct: 543 IKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGH 602
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI-CERMSPS 337
++G V + + ++M G PNS S ++ GL +K EA +++ +++ C ++ +
Sbjct: 603 CREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADA 662
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
S K LI + V+ V VL M + G +P
Sbjct: 663 EAS-KALIDLNLKEGNVDAVLDVLHGMARDGLLP 695
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 17/232 (7%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
LNQ P+ Y+ +I L + KR + + + L D Y +
Sbjct: 424 LNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMI--SLGLQPDEVTYTSLIDG 481
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI-----YTSAAKL 192
G + +A+ +M P V T+++++N L + E Q + +
Sbjct: 482 HCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPA 541
Query: 193 GVEIDA---CCLNI-------LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
++ DA CC N LLKG C G + A V +N + YS L+HG
Sbjct: 542 NIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHG 601
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
C +GNV +A ++M G ++ + LI GL ++G V E ++++++
Sbjct: 602 HCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 94/232 (40%), Gaps = 23/232 (9%)
Query: 89 PNEALYTLIIN---KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
P+E YT +I+ K +R ++ D M + V D Y+V+ + + R
Sbjct: 470 PDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGV-----LPDVVTYSVLINGLSKSARTK 524
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL---------------YGEIQGIYTSAA 190
+A LF + P+ ++ ++ +A+L E +Y S
Sbjct: 525 EAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSIL 584
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+D ++L+ G C GN+ A + + PN + +L+ GL EKG V
Sbjct: 585 DRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVV 644
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
EA +++++ + AD LI K+G V+ + +L M G P+
Sbjct: 645 EADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 147/351 (41%), Gaps = 48/351 (13%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
YT I++ LA+ K+ +M++I C + + ++ M GR+ +AI+ L
Sbjct: 168 YTAIVDWLAKNKKIQDAVALMEKITANG-CTPTIATYNALLNGLCKM-GRLEEAIDLLRK 225
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+ C P V T+ +++ L K E ++ A G+ +D C L++GL + G
Sbjct: 226 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGK 285
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI--------- 264
+ A V Q C P+V T ST++ GLC+ G + A + + ME+ G+
Sbjct: 286 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 345
Query: 265 --------------------------DADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
DT+T+NILI GL K G VE + M G
Sbjct: 346 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 405
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C P+ +Y ++ G A + M SP+ V+Y LI GLC ++ +
Sbjct: 406 CKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKAS 465
Query: 359 WVLKKMVQQGFVPRMGMWREIV-----------GCVTFGKDNRNRVYVTET 398
+ M ++G P ++ +V GC+ F + R+ V ++T
Sbjct: 466 LYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQT 516
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 8/284 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISK 146
P+ YT +I+ L + KR + + + + L D Y + I G + AG+I +
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGL--VLDTVCYTAL-IRGLLQAGKIPQ 288
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A M S C P V T + +++ L A G I+ S G+ + + L+
Sbjct: 289 ASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 348
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ ++ A +L + K C P+ TY+ L+ GLC+ G+VE A + M G
Sbjct: 349 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 408
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T+NIL+SG K G + + + M C PN +Y ++ GL +++ +A
Sbjct: 409 DVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYF 468
Query: 327 GRMICERMSP--SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
M ER P SFV Y L+ GLC +E + +M + G
Sbjct: 469 QHMK-ERGCPPDSFV-YSSLVDGLCKSGKLEGGCMLFDEMERSG 510
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 8/329 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYT--LIINKLAQAKRFDAIEDI 113
+S V+KIF L+D + S + + +++T +++ A+ KR ++
Sbjct: 23 ISTDAVVKIFQCLKDADLAWELFQCLSSPR-FGFQHSVHTGNALLDVFARTKRHREAGNL 81
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP-SYNCWPSVKTFNLVLN- 171
++ D +NV+ +A +A + +M Y PS+KT NLVL+
Sbjct: 82 LKNELATTF--LPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHG 139
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L S K+ + T+ G ID ++ L +N ++ A ++++ C P
Sbjct: 140 LCKSGKVLAAMDHFETTTTN-GCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTP 198
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+ TY+ L++GLC+ G +EEA LL ++ G D VT+ LI GL K+ + E KL
Sbjct: 199 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 258
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ M +G ++ Y ++ GLL + P+A + M + P V+ +I GLC
Sbjct: 259 KEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 318
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + K M +G P ++ ++
Sbjct: 319 GRIGAAVRIFKSMEARGLAPNEVVYSALI 347
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G++ A++ + C + T+ +++ L K + + G
Sbjct: 143 SGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIAT 202
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N LL GLC+ G LE A +L + C P+V TY++L+ GL ++ EA+ L + M
Sbjct: 203 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 262
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ DTV + LI GL + GK+ + + + M +GC P+ + ++ GL R
Sbjct: 263 LRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIG 322
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A + M ++P+ V Y LIHGLC + ++ +L +M + P
Sbjct: 323 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 373
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 3/162 (1%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESE-GIDADTVTFNILISGLRKQGKVEEGMK 289
P+V T++ L+ G C EEAF ++ ME + G+ T N+++ GL K GKV M
Sbjct: 92 PDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMD 151
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
E GC + +Y ++ L K+ +A L+ ++ +P+ +Y L++GLC
Sbjct: 152 HFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLC 211
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRN 391
+E+ +L+K+V G P + + ++ GK+ R+
Sbjct: 212 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID--GLGKEKRS 251
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLCRFSD-----GF 129
PNE +Y+ +I+ L +A++ D +++ ++K ++ LC+ D F
Sbjct: 338 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAF 397
Query: 130 F--------------YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
F YN++ AG A DM S +C P+V T+ +++ L
Sbjct: 398 FDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCK 457
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ + + + G D+ + L+ GLC++G LE + DE + N +T
Sbjct: 458 RRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQT 516
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ L+ LC+ V+EA L + EG+ +N +IS L K KV
Sbjct: 517 RTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISTLIKSAKV 564
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + ++ PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 121/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ + G + A V D K + P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M++ G+ D T+++LI+GL K+ K+++ +L + M G PN ++
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQS-VFDAITKWSLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G +P
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGCMP 414
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K + N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + P+ +Y ++YGL K +A++L+ M + + P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 2/215 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGL--VPNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ GLC++G +A +L M S G+ +
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
T+ ++I+ K+G V G KLL+ M+ GC P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPS 415
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 147/305 (48%), Gaps = 3/305 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++ L + + F+A E++M + +E S+ N++ G I A + +
Sbjct: 288 YCTLVLGLCKVEEFEAGEEMMNEM-IEFGFVPSEAAVSNLVDGL-RKKGNIGSAFDLVNK 345
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+ + PS+ +N ++N + E + ++ + G+ + +IL+ C+ G
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A + L + + + V YS+L+ G C+ G + A L + M + G+ + V +
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LISG K+G++ +L M GKG PN+ ++ ++ GL R EA +L G M+
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNR 392
+ P+ V+Y LI G C + +L +MV++G VP +R ++ G + G+ + R
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585
Query: 393 VYVTE 397
++ +
Sbjct: 586 EFMND 590
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 140/314 (44%), Gaps = 4/314 (1%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDIM 114
S V + LR ++ S + +K K + P+ +Y +IN + + + D E +
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF 378
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ + L F + Y+++ G++ A+ L M +V ++ +++
Sbjct: 379 NNMGHKGL--FPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHC 436
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
+ ++ G++ + L+ G C+ G L AF + E + PN
Sbjct: 437 KLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTY 496
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T++ L+ GLC + EA L M + + VT+N+LI G K+G +LL+ M
Sbjct: 497 TFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEM 556
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
KG P++ +Y+ ++ GL R EA+E + + E+ + + + L+HG C + +
Sbjct: 557 VEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRL 616
Query: 355 EDVDWVLKKMVQQG 368
+D ++M+ +G
Sbjct: 617 DDALDACREMLGRG 630
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 6/285 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN+ Y+++I+ + + D + K+ ++ + + Y+ + I G+ +A
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLG--KMTEVGIKATVYPYSSL-ISGHCKLGKLRAA 444
Query: 149 ETLFD-MPSYNCWPSVKTF-NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
++LFD M + P+V + +L+ +L+ + +Y G+ + L+
Sbjct: 445 KSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFR-LYHEMTGKGISPNTYTFTALIS 503
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC + A + E + N PN TY+ L+ G C++GN AF LL+ M +G+
Sbjct: 504 GLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVP 563
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
DT T+ LISGL G+V E + + ++G+ N + +L+G + R +A +
Sbjct: 564 DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDAC 623
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ ++ V Y LI+G+ Q+ + +LK+M QG P
Sbjct: 624 REMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRP 668
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 35/270 (12%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A +M P+ TF +++ L A E ++ + V +
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+L++G C+ GN AF +LDE ++ P+ TY L+ GLC G V EA + ++
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL------- 314
E + + F+ L+ G K+G++++ + M G+G + Y ++YG+L
Sbjct: 594 EQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRS 653
Query: 315 ---------DKKRFPE-------------------AKELVGRMICERMSPSFVSYKKLIH 346
D+ P+ A L M+ E P+ V+Y LI+
Sbjct: 654 IIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALIN 713
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
GLC L++ + + ++M+ +P +
Sbjct: 714 GLCKIGLMDKAELLCREMLASNSLPNQNTY 743
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 105/235 (44%)
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A E + M S C SV T+N+ + L + E I + G+ D L+
Sbjct: 233 RAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLV 292
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC+ EA +++E + P+ S L+ GL +KGN+ AF L+ +++ G+
Sbjct: 293 LGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVA 352
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+N LI+ + K GK++E L M KG +PN +Y ++ + + A
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+G+M + + Y LI G C + + +M+ G P + ++ ++
Sbjct: 413 LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLI 467
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 32/258 (12%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRF 125
+D S+I +L Q + P+ LYT +I+ A+A + DIM
Sbjct: 649 QDRRSIIDLLKQMHD-QGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIM----------V 697
Query: 126 SDGFFYNVIKIYGNM-----AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
S+G NV+ + G + KA +M + N P+ T+ L+ L S
Sbjct: 698 SEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTS----- 752
Query: 181 EIQGIYTSAAKL------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
+G A +L G + NIL++G C+ G ++ A VL P+
Sbjct: 753 --EGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 810
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
+YST+++ C +G+++EA L E M + G++ DTV +N LI G G++ + +L + M
Sbjct: 811 SYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDM 870
Query: 295 KGKGCYPNSASYQEVLYG 312
+G PN A+Y +++G
Sbjct: 871 MRRGVKPNRATYNSLIHG 888
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 11/260 (4%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+++I + + + +I D+++++ + L D Y + AG + A
Sbjct: 638 YSVLIYGILRQQDRRSIIDLLKQMHDQGL--RPDNVLYTTMIDANAKAGNLKMAFGLWDI 695
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ----GIYTSAAKLGVEIDACCLNILLKGLC 209
M S C P+V T+ ++N L L + + + S + AC L+ L
Sbjct: 696 MVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTS--- 752
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
GN+E A + D + N TY+ L+ G C+ G ++EA +L M GI D +
Sbjct: 753 -EGNIEKAIQLHDVL-LEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 810
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+++ +I ++G ++E +KL E M +G P++ +Y ++YG +A EL M
Sbjct: 811 SYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDM 870
Query: 330 ICERMSPSFVSYKKLIHGLC 349
+ + P+ +Y LIHG C
Sbjct: 871 MRRGVKPNRATYNSLIHGTC 890
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P ++T + VLN L+ + + ++ G+ D +++ LCE + A V
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ C+ +V TY+ + GLC+ V EA + + +G+ AD T+ L+ GL K
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+ E G +++ M G P+ A+ ++ GL K A +LV ++ ++PS
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFV 357
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LI+ +C +++ + + M +G P
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFP 388
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 137/300 (45%), Gaps = 4/300 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +I+ L R + M ++ E+ + ++ F ++ Y GR+ A+
Sbjct: 563 PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQ-KLNEMCFSALLHGYCK-EGRLDDAL 620
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +M + +++++ ++ + I + G+ D ++
Sbjct: 621 DACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDAN 680
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ GNL+ AF + D + C PNV TY+ L++GLC+ G +++A L M + +
Sbjct: 681 AKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQ 740
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+ + L +G +E+ ++L + + +G N+ +Y ++ G R EA E++
Sbjct: 741 NTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRIQEAAEVLVN 799
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
MI +SP +SY +I+ C + +++ + + M+ +G P + ++ GC G+
Sbjct: 800 MIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGE 859
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 11/287 (3%)
Query: 89 PNEALYTLIINKLAQ----AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
PNE Y ++I + + F+ +++++++ V D + Y + GR+
Sbjct: 528 PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV------PDTYTYRPLISGLCSTGRV 581
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S+A E + D+ + F+ +L+ + GV +D C ++L
Sbjct: 582 SEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVL 641
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G+ + + +L + Q P+ Y+T++ + GN++ AFGL + M SEG
Sbjct: 642 IYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGC 701
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ VT+ LI+GL K G +++ L M PN +Y L L + +A +
Sbjct: 702 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ 761
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L ++ E + V+Y LI G C +++ VL M+ G P
Sbjct: 762 L-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISP 807
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ +L GL A ++ DE P+V Y+ ++ LCE + A ++ RME
Sbjct: 183 LSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRME 242
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S G D T+N+ I GL K +V E +++ + KG + +Y ++ GL + F
Sbjct: 243 SSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFE 302
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+E++ MI PS + L+ GL + + ++ K+ + G P + ++ ++
Sbjct: 303 AGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALI 362
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 32/188 (17%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRI-----------------------KVEKLCRF 125
PN YT +IN L + D E + + + +EK +
Sbjct: 703 PNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL 762
Query: 126 SD----GFF-----YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
D GF YN++ GRI +A E L +M P +++ ++
Sbjct: 763 HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRR 822
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
E ++ S GV D N L+ G C G L AF + D+ ++ +PN TY
Sbjct: 823 GDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATY 882
Query: 237 STLMHGLC 244
++L+HG C
Sbjct: 883 NSLIHGTC 890
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI T + +++GL + + + L + + G P+ Y V+ L + K F A
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVD 358
+E++GRM S +Y I GLC NQ++ E V+
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVE 271
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y++II+ L + R D ++ + +K L D Y + I+G K
Sbjct: 637 PNAISYSIIIDGLCKCGREDEARELFKEMKA--LGVIPDVISYTSL-IHGFCRSGKWKDA 693
Query: 149 ETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ LF +M P V TF++++++L E + + G + L+KG
Sbjct: 694 KYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 753
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE----- 262
LC N + A + + K C P+V TY TLM GLC+ GN++ A L ++M S+
Sbjct: 754 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 813
Query: 263 -GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
D ++++I+I GL K G+ +E +L + MK G PN SY +++G + +
Sbjct: 814 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 873
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
AK L M+ + + + V+Y +IHG C + ++
Sbjct: 874 AKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQID 907
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 6/234 (2%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GR +A E +M + P V ++ +++ + + + + ++ +GV+ D
Sbjct: 652 CGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTT 711
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
++L+ LC+ G + A +L+ ++ C PN TY+TL+ GLC + EA L +M+
Sbjct: 712 FSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQ 771
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERM------KGKGCYPNSASYQEVLYGLL 314
G D VT+ L+ GL + G ++ ++L ++M G P+ SY ++ GL
Sbjct: 772 KLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLC 831
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
R EA+EL M + P+ +SY LIHG C +ED + +MV QG
Sbjct: 832 KHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 885
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 8/233 (3%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYTSAAKL 192
M RISKA + M C P+V T ++ N+ ++ +L+ + TS +
Sbjct: 575 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS-DTSPYGI 633
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
+ +A +I++ GLC+ G + A + E P+V +Y++L+HG C G ++A
Sbjct: 634 NCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDA 693
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L M G+ D TF++LI L K+GKV E +LLE M +GC PN+ +Y ++ G
Sbjct: 694 KYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 753
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
L R EA +L +M P V+Y L+ GLC ++ + KKM+
Sbjct: 754 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 806
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 13/273 (4%)
Query: 141 AGRISKAIE----TLFDMPSY--NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+G I A+E L D Y NC P+ +++++++ L E + ++ LGV
Sbjct: 611 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 670
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D L+ G C +G + A Y+ +E +P+V T+S L+ LC++G V EA
Sbjct: 671 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 730
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LLE M G +TVT+ L+ GL ++ E +L +M+ GC P+ +Y ++ GL
Sbjct: 731 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 790
Query: 315 DKKRFPEAKELVGRMICE------RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A EL +M+ + P +SY +I GLC ++ + K+M G
Sbjct: 791 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 850
Query: 369 FVPRMGMWREIV-GCVTFGKDNRNRVYVTETVD 400
+P + + ++ G GK + E VD
Sbjct: 851 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD 883
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 126/273 (46%), Gaps = 14/273 (5%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A E L M C + T++ ++ L E ++ S KLG DA
Sbjct: 249 GKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAY 308
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCE-------PNVRTYSTLMHGLCEKGNVEEAFG 254
L+KGLC+ G + A ++ E + P+V T S L+ LC++G V EA
Sbjct: 309 GTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANE 368
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LLE M G D VT++ LI GL + ++ E L M+ GC P++ +Y ++ GL
Sbjct: 369 LLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLC 428
Query: 315 DKKRFPEAKELVGRMICE------RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A +L M+ + + P+ +SY +I GLC + ++ + ++M QG
Sbjct: 429 QTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQG 488
Query: 369 FVPRMGMWREIV-GCVTFGKDNRNRVYVTETVD 400
+P + + ++ G GK + + E +D
Sbjct: 489 IMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 521
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 128/310 (41%), Gaps = 48/310 (15%)
Query: 89 PNEALYTLIINKLAQAKRFD----AIEDIMQRIKVEKLCRFS---DGFFYNVIKIYGNMA 141
P+ + ++IN L KR + A+ IM+R + + +S D +++
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A E L M C + T++ ++ L E ++ S KLG DA
Sbjct: 68 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127
Query: 202 NILLKGLCENGNLEAAF-------------------------YVLD-------------- 222
L+KGLC+ GN+ A ++D
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 187
Query: 223 --EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
E Q P+V +Y++L+HG C G E+A L M GI D T +LI K
Sbjct: 188 FKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCK 247
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+GKV E +LLE M +GC + +Y ++ GL K R EA +L M P ++
Sbjct: 248 EGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIA 307
Query: 341 YKKLIHGLCN 350
Y L+ GLC
Sbjct: 308 YGTLMKGLCQ 317
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 130/275 (47%), Gaps = 14/275 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+ +++I+ L + + ++++ + +++ C + +IK M RI
Sbjct: 341 KCIRPDVTTSSMLIDILCKEGKVIEANELLE-VMIQRGCILDIVTYSTLIKGL-CMEHRI 398
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYTSAAKLGVEID 197
S+A M C P T+ ++ N+ ++ +L+ Q + + G++
Sbjct: 399 SEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLH---QEMLNDTGRYGIKCK 455
Query: 198 ACCLN--ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
++ I++ GLC++ + A + +E Q P+V +Y+TL+HG C G E+A L
Sbjct: 456 PTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 515
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
M GI D T ++LI L K+GKV E KLLE + +GC + + ++ GL
Sbjct: 516 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCM 575
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
K R +A +L +M P+ V+ L+ GLC
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 610
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 137/320 (42%), Gaps = 15/320 (4%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI----E 149
Y+ +I L R E + ++KL D Y + G I+ A+ E
Sbjct: 385 YSTLIKGLCMEHRIS--EATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQE 442
Query: 150 TLFDMPSYN--CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L D Y C P++ +++++++ L + E + ++ G+ D L+ G
Sbjct: 443 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHG 502
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C +G E A + +E +P+V T S L+ LC+KG V EA LLE + G D
Sbjct: 503 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILD 562
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT L+ GL + ++ + +L +M+ GC PN + ++ GL A EL
Sbjct: 563 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 622
Query: 328 RMICE------RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV- 380
M+ + P+ +SY +I GLC ++ + K+M G +P + + ++
Sbjct: 623 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIH 682
Query: 381 GCVTFGKDNRNRVYVTETVD 400
G GK + E VD
Sbjct: 683 GFCRSGKWKDAKYLFNEMVD 702
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 19/292 (6%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI----E 149
Y+ +I L R E + ++KL D Y + G I+ A+ E
Sbjct: 92 YSTLIKGLCMEHRIS--EATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQE 149
Query: 150 TLFDMPSYN--CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L D Y C P++ +++++++ L + E + ++ G+ D L+ G
Sbjct: 150 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHG 209
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C +G E A + +E +P+V T L+ C++G V EA LLE M G D
Sbjct: 210 FCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILD 269
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT++ LI GL + ++ E +L MK GC P++ +Y ++ GL + A L
Sbjct: 270 IVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQ 329
Query: 328 RMI---------CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
M+ C R P + LI LC + V + + +L+ M+Q+G +
Sbjct: 330 EMLNDTSQYGIKCIR--PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCI 379
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 16/224 (7%)
Query: 193 GVEIDACCLNILLKGLCE----NGNLEAAFYVL-----DEFPKQNCEPNVRTYSTLMHGL 243
G+ D+ NIL+ LC N L A ++ + + P+V T S L+ L
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C++G V EA LLE M G D VT++ LI GL + ++ E L M+ GC P++
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICE------RMSPSFVSYKKLIHGLCNQKLVEDV 357
+Y ++ GL A +L M+ + + P+ +SY +I GLC + ++
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184
Query: 358 DWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETVD 400
+ K+M QG +P + + ++ G GK + + E +D
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLD 228
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 105/210 (50%), Gaps = 14/210 (6%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ ++++I+ L + + ++++ + +++ C + + ++K M RIS+A
Sbjct: 706 QPDVTTFSVLIDMLCKEGKVIEANELLE-VMIQRGCIPNTVTYTTLVKGL-CMNDRISEA 763
Query: 148 IETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYTSAAKLGVEI--DA 198
+ M C P V T+ ++ N+ + +L+ + + + + G D
Sbjct: 764 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELH---KKMLSDTGQYGTNFKPDV 820
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+I++ GLC++G + A + E PNV +Y++L+HG C G +E+A L
Sbjct: 821 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 880
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGM 288
M +G+ + VT++++I G K+G++++ +
Sbjct: 881 MVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY--------QEVL 310
M G+ D+ TFNILI+ L +V EG+ + + +G P+ +Y +L
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 311 YGLLDKK-RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+L K+ + EA EL+ MI V+Y LI GLC + + + W+ M + G
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120
Query: 370 VP 371
P
Sbjct: 121 RP 122
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 129/240 (53%), Gaps = 2/240 (0%)
Query: 131 YNVIKIYGN-MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+N++ IYG + ++S+AI + M ++C+P ++N +L++L E + +
Sbjct: 215 FNIL-IYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDM 273
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G+ + NIL+ G C+ G L+ A V+D + N P+V TY+ L+ GLC+ G +
Sbjct: 274 KNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKI 333
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+EAF L + ME+ + D VT+N LI+G +G +L+++M+GKG PN+ +Y V
Sbjct: 334 DEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVV 393
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ + + + A + +M SP V++ LI+G C + + ++ +M ++G
Sbjct: 394 VKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGL 453
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 135/271 (49%), Gaps = 1/271 (0%)
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
K++ F D YN I G++++A + L DM + P+ TFN++++
Sbjct: 237 KMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLG 296
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
E + A+ V D N+L+ GLC++G ++ AF + DE P+V TY+
Sbjct: 297 WLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYN 356
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
TL++G + + + F L+++ME +G+ + VT+N+++ K+GK++ L +M+
Sbjct: 357 TLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEES 416
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G P+ ++ ++ G R EA ++ M + + + V+ ++H LC ++ ++D
Sbjct: 417 GFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDA 476
Query: 358 DWVLKKMVQQG-FVPRMGMWREIVGCVTFGK 387
+L ++G FV + I+G GK
Sbjct: 477 YKLLSSASKRGYFVDEVSYGTLIMGYFKDGK 507
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 135/307 (43%), Gaps = 8/307 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L++ VI ++ Q + P+ Y ++I L + + D E + ++E L D
Sbjct: 298 LKEAAQVIDLMAQ----NNVLPDVWTYNMLIGGLCKDGKID--EAFRLKDEMENLKLLPD 351
Query: 128 GFFYNVIKIYGNMAGRIS-KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
YN + I G S K E + M P+ T+N+V+ V
Sbjct: 352 VVTYNTL-INGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNEL 410
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G D N L+ G C+ G L AF ++DE ++ + N T +T++H LC +
Sbjct: 411 RKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE 470
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+++A+ LL G D V++ LI G K GK E MKL + MK K P+ +Y
Sbjct: 471 RKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITY 530
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL + ++ + + ++ + P +Y +I G C + VE KMV+
Sbjct: 531 NTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVK 590
Query: 367 QGFVPRM 373
+ F P +
Sbjct: 591 KSFKPDL 597
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 159/341 (46%), Gaps = 31/341 (9%)
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDYN---------------PNEALYTLIIN---KLAQ 103
+K FS D +S ++L+ K+ N PN + ++++ KL
Sbjct: 238 MKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGW 297
Query: 104 AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA--GRISKAIETLFDMPSYNCWP 161
K + D+M + V D + YN++ G + G+I +A +M + P
Sbjct: 298 LKEAAQVIDLMAQNNV-----LPDVWTYNML--IGGLCKDGKIDEAFRLKDEMENLKLLP 350
Query: 162 SVKTFNLVLN--LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
V T+N ++N S+ L G + I K GV+ +A N+++K + G ++ A
Sbjct: 351 DVVTYNTLINGCFDCSSSLKG-FELIDKMEGK-GVKPNAVTYNVVVKWYVKEGKMDNAGN 408
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
L + + P+ T++TL++G C+ G + EAF +++ M +G+ ++VT N ++ L
Sbjct: 409 ELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLC 468
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
+ K+++ KLL +G + + SY ++ G + EA +L M + + PS +
Sbjct: 469 GERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSII 528
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+Y +I GLC+ + L ++++ G VP + I+
Sbjct: 529 TYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTII 569
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 135/310 (43%), Gaps = 25/310 (8%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK N I++ L ++ D ++ K F D Y + + G+
Sbjct: 450 RKGLKMNSVTLNTILHTLCGERKLDDAYKLLS--SASKRGYFVDEVSYGTLIMGYFKDGK 507
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A++ +M PS+ T+N ++ L + + + G+ D N
Sbjct: 508 SVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNT 567
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G C G +E AF ++ K++ +P++ T + L+ GLC +G +++A L S+G
Sbjct: 568 IILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKG 627
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D VT+N +ISGL K+ + EE LL M+ K P+ +Y +L L D R EA+
Sbjct: 628 KAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAE 687
Query: 324 ELVGRMICE-----------------------RMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
E + R++ + P+ V++ + I+ LC Q +D +
Sbjct: 688 EFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHM 747
Query: 361 LKKMVQQGFV 370
+++ Q+G
Sbjct: 748 VQESTQKGIT 757
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 136/299 (45%), Gaps = 2/299 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN Y +++ + + D + ++ K+E+ D +N + AGR+
Sbjct: 381 KGVKPNAVTYNVVVKWYVKEGKMDNAGNELR--KMEESGFSPDCVTFNTLINGYCKAGRL 438
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S+A + +M + T N +L+ L + + + +SA+K G +D L
Sbjct: 439 SEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTL 498
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G ++G A + DE ++ P++ TY+T++ GLC G +++ L + G+
Sbjct: 499 IMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGL 558
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D T+N +I G ++G+VE+ + +M K P+ + +L GL + +A +
Sbjct: 559 VPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALK 618
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
L I + + V+Y +I GLC + E+ +L +M ++ P + I+ +
Sbjct: 619 LFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSAL 677
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 11/227 (4%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
P++ T N ++N LV + + I++ KLGV+++ NIL+ G C L A
Sbjct: 172 PNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEA 231
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
++ + +C P+ +Y+T++ LC+KG + EA LL M++ G+ + TFNIL+SG
Sbjct: 232 IGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSG 291
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
K G ++E ++++ M P+ +Y ++ GL + EA L M ++ P
Sbjct: 292 YCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPD 351
Query: 338 FVSYKKLIHGL--CNQKL--VEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+Y LI+G C+ L E +D KM +G P + +V
Sbjct: 352 VVTYNTLINGCFDCSSSLKGFELID----KMEGKGVKPNAVTYNVVV 394
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 25/259 (9%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K+ P+ Y +I L + + D D + + L D YN I + G
Sbjct: 519 KEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGL--VPDETTYNTIILGYCREG 576
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ KA + M + P + T N++L L + + + ++ + G IDA N
Sbjct: 577 QVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYN 636
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++ GLC+ E AF +L E ++ P+ TY+ ++ L + G ++EA + R+ +
Sbjct: 637 TIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQ 696
Query: 263 G-----------------------IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
G D ++VTF+ I+ L QGK ++ M +++ KG
Sbjct: 697 GKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGI 756
Query: 300 YPNSASYQEVLYGLLDKKR 318
+ ++Y ++ GL+ +++
Sbjct: 757 TLHKSTYISLMEGLIKRRK 775
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + K + N T++ L++G C + + EA GL+ +M+ D V++N ++ L
Sbjct: 199 IFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLC 258
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+GK+ E LL MK G PN ++ ++ G EA +++ M + P
Sbjct: 259 KKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVW 318
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GC 382
+Y LI GLC +++ + +M +P + + ++ GC
Sbjct: 319 TYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGC 362
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 133/275 (48%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS 156
+I + K D+ D+ + I K + SD + ++ + I +G + A++
Sbjct: 35 LIQVVVSRKGKDSASDVFEAILETKGTQRSDFYVFSGLMIAYLESGFVRDAVQCFRLTKQ 94
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
+ T VL L+ + + + Y + G NIL++ C+ G +
Sbjct: 95 HKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRL 154
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A V D K P+V +++TL++G + G+++E F L M + G D T++ILI+
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILIN 214
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
GL K+GK++E +L M G PN ++ +++G ++ A E+ +M+ + +SP
Sbjct: 215 GLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSP 274
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++Y LI+GLC + ++ V ++ +M+ G P
Sbjct: 275 DLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKP 309
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G + A +++FD + + PSV +FN ++N + E + +
Sbjct: 137 YFFNILMQRFCKEGEMRLA-QSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKS 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ G + D +IL+ GLC+ G L+ A + +E PN T++TL+HG C+
Sbjct: 196 AMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNE 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+G+ D +T+N LI GL K+G++++ L++ M G P+ SY
Sbjct: 256 KVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A EL +MI E + V+Y LI LC + D + +L++M+
Sbjct: 316 TLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P G + I+
Sbjct: 376 GLKPDNGTYTMII 388
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S+ FN+++ Q ++ + K G+ N L+ G + G+L+ F +
Sbjct: 135 SLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLK 194
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
+P+V TYS L++GLC++G ++EA L M G+ + VTF LI G K
Sbjct: 195 SAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKN 254
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
KV+ M++ ++M +G P+ +Y ++YGL K + +L+ MI + P +SY
Sbjct: 255 EKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISY 314
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
LI G C + +E + KM+Q+ + ++ C+
Sbjct: 315 TTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCL 356
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 129/272 (47%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQSV-FDAITKWGLRPSVVSFNTLINGY----IKL-----GDLDEGFRLKSAMHASGA 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L E ++ G+ + L+ G C+N ++ A
Sbjct: 203 QPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q P++ TY+TL++GLC+KG +++ L++ M G+ D +++ LI G
Sbjct: 263 IYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E ++L +M + + +Y ++ L + R +A++++ M+ + P
Sbjct: 323 KEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C ++ + +L++M + G +P
Sbjct: 383 TYTMIINEFCKKRDSKTASKLLREMQRDGPLP 414
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A E +M P+ TF +++ + IY G+ D
Sbjct: 220 GKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITY 279
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC+ G L+ ++DE +P+ +Y+TL+ G C++G++E A L +M
Sbjct: 280 NTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQ 339
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
E I D V + LIS L ++G+ + K+L M G P++ +Y ++ K+
Sbjct: 340 ESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKT 399
Query: 322 AKELVGRMICERMSPSFVS 340
A +L+ M + P V+
Sbjct: 400 ASKLLREMQRDGPLPGVVT 418
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 133/285 (46%), Gaps = 3/285 (1%)
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
+++N L F ED++Q++K C S+ YN I + GR A+ L DM
Sbjct: 231 ILLNSLCTNGEFRKAEDMLQKMKS---CHISNSVTYNTILHWYVKKGRFKAALCVLEDME 287
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
+ V T+N++++ L K + K + D C N L+ G G +
Sbjct: 288 RDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKIN 347
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A YV + +QN P+V TY+T++ G C +++A +L M+ G+ +T++ L+
Sbjct: 348 HARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALL 407
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+G K + + L+E +K +G N ++ G +AK+++ M + +
Sbjct: 408 NGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGID 467
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P ++Y LI+G+C + + +L +M + G +P ++ ++
Sbjct: 468 PDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLI 512
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 130/278 (46%), Gaps = 2/278 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y+ +IN + + + ++I+ R++ + + Y + Y AG + +A
Sbjct: 467 DPDVITYSALINGMCRMAKMHETKEILSRMQKSGI--LPNDVLYTTLICYYCKAGYVKEA 524
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ D+ + N +L+ + E + +++ + D+ N ++
Sbjct: 525 LKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDS 584
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C GN+ AF V D+ + PNV TY L+ GLC+ G++ +A + + D
Sbjct: 585 YCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAID 644
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TFN L+ G+ + G ++E + L E+M C P+ +Y +L G K + A ++
Sbjct: 645 EKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQ 704
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
M+ + + P V+Y L++GL N+ V+ +V +++
Sbjct: 705 MMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEII 742
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 111/240 (46%), Gaps = 1/240 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G I A DM Y P+V T+ +L L + + + + ID
Sbjct: 589 GNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTF 648
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL G+C G L+ A + ++ K NC P++ TY+ L+ G C KG + A +L+ M
Sbjct: 649 NALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLE 708
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-GCYPNSASYQEVLYGLLDKKRFP 320
+G+ DTV + L++GL +G+V+ + + K G Y + +Y ++ G L +
Sbjct: 709 KGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVN 768
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
K ++ M + P+ SY L+HG + ++ K MV++G P +R ++
Sbjct: 769 TIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLI 828
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 6/300 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
++ D P+E Y +IN + + + + + + L S + +I Y
Sbjct: 322 RKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVP-SVATYTTMIDGYCR-NR 379
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI KA+ L +M PS T++ +LN + G + G+ I+
Sbjct: 380 RIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRT 439
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ G C+ G + A +L + +P+V TYS L++G+C + E +L RM+
Sbjct: 440 ILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKS 499
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI + V + LI K G V+E +K + +G N + +L+ + EA
Sbjct: 500 GILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEA 559
Query: 323 KELVGRMICERMSPSF--VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ R RM+ SF VS+ ++I C++ + V MV+ G+ P + ++ ++
Sbjct: 560 EHF--RQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLL 617
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 128/304 (42%), Gaps = 37/304 (12%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L +Y RK P+ Y L+I L++ D ++++ +E + F D ++++
Sbjct: 808 LYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGI--FPDRLVFDILITA 865
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+ ++ A++ M + PS KTF+ ++N
Sbjct: 866 FSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMIN-------------------------- 899
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
GL G L+ + VL E + +PN Y L++ C G ++ AF L E
Sbjct: 900 ---------GLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKE 950
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M++ GI V + +I GL + GK+EE + + M G P A++ +++ L +
Sbjct: 951 EMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKES 1010
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+ +A L M R+ VSY LI GLC K + D + +M +G P + +
Sbjct: 1011 KIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYI 1070
Query: 378 EIVG 381
+ G
Sbjct: 1071 TLTG 1074
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 112/234 (47%), Gaps = 7/234 (2%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG----IYTSAAKLGVEID 197
G+I A+ L M P + +LN L++ G+++ + K G+ D
Sbjct: 694 GKILPALVILQMMLEKGVVPDTVAYTCLLNGLINE---GQVKAASYVFHEIICKEGLYAD 750
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+ G ++ N+ ++ + + PN +Y+ LMHG ++G ++ L +
Sbjct: 751 CIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYK 810
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M +GI D VT+ +LI GL + G ++ +K LE+M +G +P+ + ++ +K
Sbjct: 811 YMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKS 870
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ A ++ M MSPS ++ +I+GL + ++ VL +M+Q G P
Sbjct: 871 KMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQP 924
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 34/204 (16%)
Query: 202 NILLKGLCENGNLEAAFYVLDE-----FP----------------------------KQN 228
N +L L E G + + L E FP ++
Sbjct: 195 NTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKS 254
Query: 229 CE-PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
C N TY+T++H +KG + A +LE ME + + AD T+NI+I L + +
Sbjct: 255 CHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRA 314
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
LL+RM+ P+ +Y ++ G + + A+ + M+ + + PS +Y +I G
Sbjct: 315 FLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDG 374
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVP 371
C + ++ +L +M G +P
Sbjct: 375 YCRNRRIDKALSILSEMQITGVMP 398
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 126/325 (38%), Gaps = 51/325 (15%)
Query: 89 PNEALYTLIINKLAQAKRFDA----IEDIMQR-IKVEKLCR--FSDGFFYNVIKIYGNMA 141
P+E Y+ ++N + +ED+ R I + K R DGF
Sbjct: 398 PSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFC---------QV 448
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G ISKA + L M P V T++ ++N + E + I + K G+ +
Sbjct: 449 GEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLY 508
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ C+ G ++ A + ++ N ++ L+H +G + EA + M
Sbjct: 509 TTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSR 568
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL-------- 313
I D+V+FN +I +G + + + M G PN +YQ +L GL
Sbjct: 569 MNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQ 628
Query: 314 --------------LDKKRF-------------PEAKELVGRMICERMSPSFVSYKKLIH 346
+D+K F EA +L +MI P +Y L+
Sbjct: 629 ARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLS 688
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
G C + + +L+ M+++G VP
Sbjct: 689 GFCRKGKILPALVILQMMLEKGVVP 713
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 147/305 (48%), Gaps = 3/305 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++ L + + F+A E++M + +E S+ N++ G I A + +
Sbjct: 288 YCTLVLGLCKVEEFEAGEEMMNEM-IEFGFVPSEAAVSNLVDGL-RKKGNIGSAFDLVNK 345
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+ + PS+ +N ++N + E + ++ + G+ + +IL+ C+ G
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A + L + + + V YS+L+ G C+ G + A L + M + G+ + V +
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LISG K+G++ +L M GKG PN+ ++ ++ GL R EA +L G M+
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNR 392
+ P+ V+Y LI G C + +L +MV++G VP +R ++ G + G+ + R
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585
Query: 393 VYVTE 397
++ +
Sbjct: 586 EFMND 590
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 106/247 (42%), Gaps = 9/247 (3%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A +M P+ TF +++ L A E ++ + V +
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-- 259
N+L++G C+ GN AF +LDE ++ P+ TY L+ GLC G V EA + +
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593
Query: 260 ------ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
E EG + VT+ LI+GL K G +++ L M PN +Y L L
Sbjct: 594 EQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYL 653
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ +A +L ++ E + V+Y LI G C +++ VL M+ G P
Sbjct: 654 TSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDC 712
Query: 374 GMWREIV 380
+ I+
Sbjct: 713 ISYSTII 719
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 105/235 (44%)
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A E + M S C SV T+N+ + L + E I + G+ D L+
Sbjct: 233 RAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLV 292
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC+ EA +++E + P+ S L+ GL +KGN+ AF L+ +++ G+
Sbjct: 293 LGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVA 352
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+N LI+ + K GK++E L M KG +PN +Y ++ + + A
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+G+M + + Y LI G C + + +M+ G P + ++ ++
Sbjct: 413 LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLI 467
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 127/309 (41%), Gaps = 48/309 (15%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +PN +T +I+ L A R + + + + YNV+ G
Sbjct: 489 KGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV--IPNEVTYNVLIEGHCKEGNT 546
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE----IQGIYTSAAKLGVEIDACC 200
+A E L +M P T+ +++ L S E + + KL EI+ C
Sbjct: 547 VRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLN-EIEGCL 605
Query: 201 LNI-----LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
N+ L+ GLC+ G ++ A + E N PN TY+ + L +GN+E+A L
Sbjct: 606 PNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL 665
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEG---------------------------- 287
+ + EG A+TVT+NILI G K G+++E
Sbjct: 666 HDVL-LEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCR 724
Query: 288 -------MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+KL E M +G P++ +Y ++YG +A EL M+ + P+ +
Sbjct: 725 RGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRAT 784
Query: 341 YKKLIHGLC 349
Y LIHG C
Sbjct: 785 YNSLIHGTC 793
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P ++T + VLN L+ + + ++ G+ D +++ LCE + A V
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ C+ +V TY+ + GLC+ V EA + + +G+ AD T+ L+ GL K
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+ E G +++ M G P+ A+ ++ GL K A +LV ++ ++PS
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFV 357
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LI+ +C +++ + + M +G P
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFP 388
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ +L GL A ++ DE P+V Y+ ++ LCE + A ++ RME
Sbjct: 183 LSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRME 242
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S G D T+N+ I GL K +V E +++ + KG + +Y ++ GL + F
Sbjct: 243 SSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFE 302
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+E++ MI PS + L+ GL + + ++ K+ + G P + ++ ++
Sbjct: 303 AGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALI 362
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI T + +++GL + + + L + + G P+ Y V+ L + K F A
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVD 358
+E++GRM S +Y I GLC NQ++ E V+
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVE 271
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 114/241 (47%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ AI +M PS+ FN +L+ + K + + + L + D N
Sbjct: 60 KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C L A VL + K EP++ T S+L++G C + +A L+++M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G DTVTFN LI GL K E + L+++M +GC P+ +Y V+ GL + A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ V Y +I GLC K ++D + KM +G P + + ++ C
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299
Query: 383 V 383
+
Sbjct: 300 L 300
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 3/282 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+S+L + K K + +Y II+ L + K D + +++ + + D F YN +
Sbjct: 240 LSLLKKMEKGK-IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGI--RPDVFTYNSL 296
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
GR S A L +M P+V TF+ +++ V E + +Y K +
Sbjct: 297 ISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ D + L+ G C + L+ A ++ + ++C PNV TY+TL+ G C+ VEE
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L M G+ +TVT+N LI GL + G + K+ ++M G P+ +Y +L GL
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+ +A + + +M P +Y +I G+C VED
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 6/286 (2%)
Query: 87 YNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRI 144
Y P+ + ++N +KR DA+ + Q ++ + D +N + I+G + +
Sbjct: 146 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE---MGYKPDTVTFNTL-IHGLFLHNKA 201
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S+A+ + M C P + T+ V+N L + K +E D N +
Sbjct: 202 SEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 261
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+ +++ AF + ++ + P+V TY++L+ LC G +A LL M I
Sbjct: 262 IDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKI 321
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ + VTF+ LI K+GK+ E KL + M + P+ +Y ++ G R EAK
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ MI + P+ V+Y LI G C K VE+ + ++M Q+G V
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 168/380 (44%), Gaps = 39/380 (10%)
Query: 34 ASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEAL 93
ASP S + A ++++ LS +L + L D I + + Q P+
Sbjct: 29 ASPLFSLRGVYFSAASYDYREKLSRNALLNL--KLDDAIGLFGEMVQSRPL----PSIVE 82
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLCRFSD------------ 127
+ +++ +A+ K+FD + + +R++ + CR S
Sbjct: 83 FNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 128 --GFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
G+ +++ + + G RIS A+ + M P TFN +++ L
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 202
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E + + G + D ++ GLC+ G+++ A +L + K E +V Y+T++
Sbjct: 203 EAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 262
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
GLC+ ++++AF L +ME++GI D T+N LIS L G+ + +LL M +
Sbjct: 263 DGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKIN 322
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
PN ++ ++ + + + EA++L MI + P +Y LI+G C +++ +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 361 LKKMVQQGFVPRMGMWREIV 380
+ M+ + P + + ++
Sbjct: 383 FELMISKDCFPNVVTYNTLI 402
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 139/323 (43%), Gaps = 55/323 (17%)
Query: 73 SVISVLNQYSKRKD------------YNPNEALYTLIINKLAQAKRF---DAIEDIMQRI 117
S+IS L Y + D NPN ++ +I+ + + + + D M +
Sbjct: 295 SLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
++ D F Y+ + M R+ +A M S +C+P+V T+N ++ AK
Sbjct: 355 SID-----PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
E ++ ++ G+ + N L++GL + G+ + A + + P++ TYS
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
L+ GLC+ G +E+A + E ++ ++ D T+NI+I G+ K GKVE+G L + K
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G PN + Y +I G C + L E+
Sbjct: 530 GVKPN-----------------------------------VIIYTTMISGFCRKGLKEEA 554
Query: 358 DWVLKKMVQQGFVPRMGMWREIV 380
D + ++M + G +P G + ++
Sbjct: 555 DALFREMKEDGTLPDSGCYNTLI 577
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 8/236 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD PN Y +I +AKR + ++ + + L + YN + AG
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL--VGNTVTYNTLIQGLFQAGDC 446
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDACCL 201
A + M S P + T++++L+ L YG+++ ++ K +E D
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCK---YGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NI+++G+C+ G +E + + + +PNV Y+T++ G C KG EEA L M+
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+G D+ +N LI + G +L++ M+ G ++++ V+ L D +
Sbjct: 564 DGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 158/348 (45%), Gaps = 22/348 (6%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL---AQAKRFDAI 110
D + + ++ F +L SV KR Y+PN +I L + KR
Sbjct: 95 DLCTLSILINCFCHLTHITFAFSVFANILKR-GYHPNAITLNTLIKGLCFCGEIKRALHF 153
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET------LFDMPSYNCWPSVK 164
D KV + GF + + YG + + KA ET L + ++ P +
Sbjct: 154 HD-----KV-----VAQGFQLDQVS-YGTLINGLCKAGETKAVARLLRKLEGHSVKPDLV 202
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
+ +++ L KL G+ +Y+ G+ + L+ G C GNL+ AF +L+E
Sbjct: 203 MYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEM 262
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+N P+V T++ L+ L ++G ++EA L E M+ + + + VT+ LI GL K +
Sbjct: 263 KLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHL 322
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
E + L ++MK +G PN SY +L L R AK+ ++ + + +Y +
Sbjct: 323 ERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVM 382
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
I+GLC L DV + KM +G +P ++ I+ C KD ++
Sbjct: 383 INGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTII-CALLEKDENDK 429
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 127/283 (44%), Gaps = 39/283 (13%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P+ +YT II+ L + K D+ + V+ + S F I+G + G + +A
Sbjct: 199 PDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGI---SPNVFTYTTLIHGFCIMGNLKEA 255
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L +M N P V TFN IL+
Sbjct: 256 FSLLNEMKLKNINPDVYTFN-----------------------------------ILIDA 280
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L + G ++ A + +E +N PN+ TY++L+ GLC+ ++E A L ++M+ +GI +
Sbjct: 281 LAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPN 340
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++ IL+ L K G++E + + + KG + N +Y ++ GL F + +L
Sbjct: 341 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKS 400
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+M + P+ +++K +I L + + + L++M+ +G +
Sbjct: 401 KMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGLL 443
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 137/313 (43%), Gaps = 25/313 (7%)
Query: 56 LSPTEVLKIFSNLR-DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
+ P +++ S+ R P + + + + +E ++ I+ LAQ + +M
Sbjct: 385 VDPDLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVM 444
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL-----------------FD-MPS 156
+R+ + R D + I G ++ +S I L FD M
Sbjct: 445 ERVINANMHRIVD------VLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIK 498
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
P VK N +L +L L + +Y + + G++ N LL C+ G ++
Sbjct: 499 SRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQ 558
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
+L E ++ C PN TY+ L++GL +KG E+A GL+ M G+ T+N LI
Sbjct: 559 GLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIY 618
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G +G + E + L E M KG P A+Y +YGL R +A + + M+ + P
Sbjct: 619 GYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP 678
Query: 337 SFVSYKKLIHGLC 349
VSY LI+G C
Sbjct: 679 DVVSYNTLIYGYC 691
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ + ++ L +M C P+ T+N+++N L + + +G+ K G+++ A
Sbjct: 553 GGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 612
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G G L A + +E + P V TY++ ++GLC+ G + +A L M
Sbjct: 613 YNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML 672
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ + D V++N LI G + G + + L + ++ +P +Y +L GL +
Sbjct: 673 ANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELE 732
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF-VPRMGMWREI 379
A++L MI E ++P V+Y L++G C + +M+ +G + I
Sbjct: 733 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRI 792
Query: 380 VGCVTFGKDNR 390
VG + G +R
Sbjct: 793 VGELKLGDTSR 803
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 6/283 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-A 141
+R+ PN+ Y ++IN L++ F+ + ++ + L + YN + IYG
Sbjct: 567 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLK--VSAYTYNPL-IYGYFNK 623
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G +++A+ +M P+V T+N + L ++ +Q + A + D
Sbjct: 624 GLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLAN-NLLPDVVS 682
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C GNL AF + DE P + TY+TL+ GLC +G +E A L M
Sbjct: 683 YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI 742
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+EGI D VT+ IL++G K G + + + M +G +S +Y + G L
Sbjct: 743 NEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTS 802
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
A L M+ + P + Y ++ GLC +E+ +L+K
Sbjct: 803 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 845
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ A+ +M +PS+ F+ +L+ + + + + LG+ + +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C L A VL + K EPN+ T S+L++G C + EA L+++M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G +TVTFN LI GL K E + L++RM KGC P+ +Y V+ GL + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ P + Y +I GLC K ++D + K+M +G P + + ++ C
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 383 V 383
+
Sbjct: 301 L 301
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 3/280 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+LN+ + K P +YT II+ L + K D ++ + ++ + + R + + ++I
Sbjct: 243 LLNKMEQGK-LEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGI-RPNVVTYSSLISC 300
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
N GR S A L DM P V TF+ +++ V E + +Y K ++
Sbjct: 301 LCNY-GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ L+ G C + L+ A + + ++C P+V +YSTL+ G C+ V+E L
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF 419
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M G+ +TVT+ LI GL + G + ++ + M G PN +Y +L GL
Sbjct: 420 REMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+ +A + + +M P+ +Y +I G+C VED
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 134/290 (46%), Gaps = 14/290 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG---- 142
Y PN + ++N +KR ++ ++ F G+ N + + G
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQM-------FVTGYQPNTVTFNTLIHGLFLH 199
Query: 143 -RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-VEIDACC 200
+ S+A+ + M + C P + T+ +V+N L + ++ I + + G +E
Sbjct: 200 NKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK-RGDTDLAFILLNKMEQGKLEPGVLI 258
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
++ GLC+N +++ A + E + PNV TYS+L+ LC G +A LL M
Sbjct: 259 YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
I+ D TF+ LI K+GK+ E KL + M + P+ +Y ++ G R
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
EAK++ M+ + P VSY LI G C K V++ + ++M Q+G V
Sbjct: 379 EAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 117/229 (51%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RIS+A+ + M P+ TFN +++ L E + G + D
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYG 225
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+++ GLC+ G+ + AF +L++ + EP V Y+T++ GLC+ ++++A L + ME++
Sbjct: 226 VVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETK 285
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI + VT++ LIS L G+ + +LL M + P+ ++ ++ + + + EA
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++L M+ + PS V+Y LI+G C +++ + + MV + P
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 148/306 (48%), Gaps = 3/306 (0%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+++ + K + + P+ ++ +++ +A+ +FD + + +++ + L + + Y+++
Sbjct: 66 VALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQM--QNLGMPHNHYTYSIL 122
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
++ A+ L M P++ T + +LN +K E + G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ + N L+ GL + A ++D + C+P++ TY +++GLC++G+ + AF
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFI 242
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL +ME ++ + + +I GL K +++ + L + M+ KG PN +Y ++ L
Sbjct: 243 LLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ R+ +A L+ MI +++P ++ LI + + + + + +MV++ P +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 375 MWREIV 380
+ ++
Sbjct: 363 TYSSLI 368
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
M R+ +A + M S +C+P V +++ ++ AK E ++ ++ G+ +
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
L++GL + G+ + A + E PN+ TY+TL+ GLC+ G +E+A + E +
Sbjct: 433 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ ++ T+NI+I G+ K GKVE+G L + KG P+ +Y ++ G K
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
EA L M + P+ Y LI E ++K+M GF
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------GR 143
N YT +I L QA D ++I + + SDG N++ Y + G+
Sbjct: 430 NTVTYTTLIQGLFQAGDCDMAQEIFKEM-------VSDGVPPNIMT-YNTLLDGLCKNGK 481
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA+ + P++ T+N+++ + A + ++ + + GV+ D N
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G C G+ E A + E + PN Y+TL+ G+ E + L++ M S G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 264 IDADTVTFNILISGLRKQGKVEE 286
D T L++ + G++++
Sbjct: 602 FAGDASTIG-LVTNMLHDGRLDK 623
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 145/317 (45%), Gaps = 23/317 (7%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI-------KVEKLCRFS 126
V SV+N+ +R PN YT I++ +A+ I+ R+ V
Sbjct: 241 VFSVVNEMVQRG-LQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 299
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG-- 184
GFF + G++ A+ M PS ++N+++ L G+++G
Sbjct: 300 KGFFED---------GKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCC---IGDLKGAL 347
Query: 185 -IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ S + + +A + L+ G G+L+ A + +E C+PNV Y+ ++ L
Sbjct: 348 DFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVL 407
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C+K ++A L+++M + +TVTFN LI L G+V + + M+ GC+PN
Sbjct: 408 CKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPND 467
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y E+L+GL + +A +V M+ S V+Y +I+ LC + + +L +
Sbjct: 468 RTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGR 527
Query: 364 MVQQGFVPRMGMWREIV 380
M+ QG P + I+
Sbjct: 528 MMVQGIQPDAFTFNAII 544
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 130/283 (45%), Gaps = 33/283 (11%)
Query: 98 INKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY 157
+ +LA A D ++ +Q +++ + D I + AG +A++T +
Sbjct: 58 VRRLAAAGDVDGVQYALQEMRLRGVACTEDALVA-AIGAFAR-AGSADRALKTFYRASDL 115
Query: 158 NCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
C P V+ +N +L+ L+ + G + +Y + K GV+ + N+L++ LC+N ++A
Sbjct: 116 GCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDA 175
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA------------------------ 252
A +LDE ++ C P+ ++ T++ G+C+ G VEEA
Sbjct: 176 ARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGE 235
Query: 253 ------FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
F ++ M G+ + VT+ ++ K ++ +L RM GC PN ++
Sbjct: 236 FRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF 295
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
++ G + + +A + M+ E +PS +SY LI GLC
Sbjct: 296 TALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLC 338
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 132/294 (44%), Gaps = 2/294 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ Y ++I L D +K L + Y+ + + AG +
Sbjct: 323 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNAL--LPNATTYSTLVDGFSNAGDLDG 380
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ +M S C P+V + ++++L ++ + + + + N L+
Sbjct: 381 AMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIG 440
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G + A V + C PN RTY+ L+HGL +GN ++AF ++ M + G +
Sbjct: 441 RLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFEL 500
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
VT+N +I+ L + + M LL RM +G P++ ++ +++ + + A L+
Sbjct: 501 SLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLL 560
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
G+M + V+Y LI LCNQ + + L KM+ +G P W +V
Sbjct: 561 GQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 614
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 136/327 (41%), Gaps = 15/327 (4%)
Query: 62 LKIFSNLRDPI-------SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
++++++L D + +V+ V + ++ +PN Y L+I L Q R DA ++
Sbjct: 122 VRVYNHLLDALLRENMVGAVVPVYDNM-RKAGVDPNVYTYNLLIRALCQNDRVDAARKML 180
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ K C D + I GR+ +A L + P ++N V++ L
Sbjct: 181 DEMS-RKGCH-PDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALC 233
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E+ + + G++ + ++ C+ L A +L C PNV
Sbjct: 234 GEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVL 293
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T++ L+ G E G V +A + M EG T+++N+LI GL G ++ + M
Sbjct: 294 TFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM 353
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
K PN+ +Y ++ G + A + M P+ V Y +I LC + +
Sbjct: 354 KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMF 413
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ + ++ KM+ P + ++G
Sbjct: 414 DQAESLIDKMLMDNCPPNTVTFNTLIG 440
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 108/226 (47%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA+E L M P+ T+N +L+ S++ E G GVE D N
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ LC+NG A + D K+ EP++ TY TL+ G KG + E LL+ M G
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D FNILI KQ KV+E M + +M+ G PN +Y V+ L +A
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+MI E ++P+ + Y LIH LC + + ++ +M+ +G
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGI 472
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 127/301 (42%), Gaps = 4/301 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + +T ++ L KR DI+ R E C D F ++ R
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSC-MPDVFSCTILLKGLCDENR 173
Query: 144 ISKAIETLFDMP---SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+A+E L M P V ++ V+N + Y + D
Sbjct: 174 SQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVT 233
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ ++ LC+ ++ A VL K PN TY++++HG C +EA G L++M
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMR 293
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+G++ D VT+N L+ L K G+ E K+ + M +G P+ A+Y +L G K
Sbjct: 294 SDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALV 353
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E L+ M+ + P + LI Q+ V++ V KM Q G P + + ++
Sbjct: 354 EMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413
Query: 381 G 381
G
Sbjct: 414 G 414
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 120/261 (45%), Gaps = 3/261 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G KA T +M P V T++ ++ L + + + T+ K GV +
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L G C + + A L + EP+V TY++LM LC+ G EA + + M
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G++ D T+ L+ G +G + E LL+ M G +P+ + ++ +++ E
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDE 389
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A + +M ++P+ V+Y +I LC V+D ++M+ +G P + ++ ++
Sbjct: 390 AMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 449
Query: 382 --CVTFGKDNRNRVYVTETVD 400
C+ F K ++ + E +D
Sbjct: 450 SLCI-FDKWDKAEELILEMLD 469
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 14/279 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM--- 140
R +P+ ++ ++I A+ ++ D + +++ G NV+ YG +
Sbjct: 364 RNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMR-------QHGLNPNVVT-YGAVIGI 415
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+G + A+ M P++ + +++ L + + + + G+ ++
Sbjct: 416 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLN 475
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N ++ C+ G + + + D + +PNV TYSTL+ G C G ++EA LL
Sbjct: 476 TIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLS 535
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M S G+ D VT+N LI+G + ++++ + L + M G PN +Y +L GL +
Sbjct: 536 SMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTR 595
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
R AKEL + +Y ++HGLC L ++
Sbjct: 596 RTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDE 634
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 147/333 (44%), Gaps = 15/333 (4%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD-AIED 112
D +S T V+ F D S ++ R+ +P+ Y+ II L + + D A+E
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRR-ISPDVVTYSSIIAALCKGQAMDKAMEV 253
Query: 113 IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS-----KAIETLFDMPSYNCWPSVKTFN 167
+ +K +G N + + G S +AI L M S P V T+N
Sbjct: 254 LTTMVK--------NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYN 305
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+++ L E + I+ S K G+E D LL+G G L +LD +
Sbjct: 306 SLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRN 365
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
P+ ++ L+ ++ V+EA + +M G++ + VT+ +I L K G V++
Sbjct: 366 GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDA 425
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
M E+M +G PN Y +++ L ++ +A+EL+ M+ + + + + +IH
Sbjct: 426 MLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHS 485
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C + V + + + MV+ G P + + ++
Sbjct: 486 HCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P FN+++ + E +++ + G+ + ++ LC++G+++ A
Sbjct: 369 PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLY 428
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
++ + PN+ Y++L+H LC ++A L+ M GI +T+ FN +I K
Sbjct: 429 FEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK 488
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G+V E KL + M G PN +Y ++ G + EA +L+ M M P V+
Sbjct: 489 EGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVT 548
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI+G C ++D + K+MV G P + + I+
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 588
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 130/294 (44%), Gaps = 4/294 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN +YT +I+ L ++D E+++ + +C + F+N I GR+ ++
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL--NTIFFNSIIHSHCKEGRVIES 495
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E LFD M P+V T++ +++ A E + +S +G++ D N L+
Sbjct: 496 -EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C ++ A + E PN+ TY+ ++ GL A L + G
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQL 614
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T+NI++ GL K +E +++ + + + ++ ++ LL R EAK+L
Sbjct: 615 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 674
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P++ +Y+ + + Q L+E++D + M G GM IV
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIV 728
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 4/215 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF-Y 219
P+V T+ +++ A + K G ++A LLKGLC + A
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE---GIDADTVTFNILIS 276
VL + +C P+V + + L+ GLC++ +EA LL M + G D V++ +I+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G K+G ++ M + P+ +Y ++ L + +A E++ M+ + P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ ++Y ++HG C+ + ++ LKKM G P
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEP 299
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 104/245 (42%), Gaps = 14/245 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF------FYNVIKIY 137
R PN Y+ +I+ A + D ++ + FS G + +I Y
Sbjct: 504 RIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM-------FSVGMKPDCVTYNTLINGY 556
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
++ R+ A+ +M S P++ T+N++L L + + +Y K G +++
Sbjct: 557 CRVS-RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLE 615
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
NI+L GLC+N + A + + + RT++ ++ L + G +EA L
Sbjct: 616 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFV 675
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
S G+ + T+ ++ + QG +EE +L M+ GC +S ++ LL +
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRG 735
Query: 318 RFPEA 322
A
Sbjct: 736 EITRA 740
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 4/161 (2%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P V TY L+ C G ++ F L + +G + +TF L+ GL + + M +
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 291 -LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER---MSPSFVSYKKLIH 346
L RM C P+ S +L GL D+ R EA EL+ M +R +P VSY +I+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
G + + +M+ + P + + I+ + G+
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQ 245
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ G NIL+ + G + A V D K P+V +++TLM+G + G
Sbjct: 126 ENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ E F L M++ G+ D T+++LI+GL K+ K+++ L + M KG PN ++
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 111/209 (53%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K G+ N L+ G + G+L F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M +G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + P+ +Y ++YGL K +A++L+ MI + + P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 135/272 (49%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G +++ M +
Sbjct: 153 RLAQS-VFDAITKWGLRPSVVSFNTLMNGY----IKL-----GDLNEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G++P
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 72 ISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIMQR 116
+S +++N Y K D N P+ Y+++IN L + + D +
Sbjct: 172 VSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDE 231
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+ + L +G + + GR+ A+E M S + P + T+N ++ L
Sbjct: 232 MLDKGLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 289
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ Q + G++ D L+ G C+ G+LE AF K+N + Y
Sbjct: 290 GDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+ L+ GLC++G +A +L M S G+ + T+ ++I+ K+G V G KLL+ M+
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Query: 297 KGCYPNSAS 305
G P+ +
Sbjct: 410 DGYMPSVVT 418
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 135/301 (44%), Gaps = 12/301 (3%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + + +T ++ L KR DI+ R E C D F YN + R
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGC-IPDVFSYNNLLKGLCDENR 178
Query: 144 ISKAIETLFDMP---SYNCWPSVKTFNLVLNLL--------VSAKLYGEIQGIYTSAAKL 192
+A+E L M P V ++N VLN ++A+ + + + K
Sbjct: 179 SQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKN 238
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GV D N +L G C +G + A L + EPNV TYS+LM+ LC+ G EA
Sbjct: 239 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 298
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ + M G++ D T+ L+ G K+G+V E KL + M G P+ +Y ++ G
Sbjct: 299 RKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 358
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+ EA +L+ M+ + P V+Y LI+G C ++D + K+MV G P
Sbjct: 359 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 418
Query: 373 M 373
+
Sbjct: 419 I 419
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 113/231 (48%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN I +G+ +AI TL M S P+V T++ ++N L E + I+
Sbjct: 243 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 302
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S K G+E D LL+G C+ G + + + D + +P++ TY+TL+ G C
Sbjct: 303 DSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA 362
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G ++EA LL M S G+ D VT+ LI+G + ++++ + L + M G PN +Y
Sbjct: 363 GKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 422
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
+L GL +R AKEL + +Y ++HGLC L ++
Sbjct: 423 NIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 473
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 1/222 (0%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+GFF I+ A + KA+E L M P T+N +L+ S+ E G
Sbjct: 209 NGFFKEGIQTKLT-AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 267
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
GVE + + L+ LC+NG A + D K+ EP++ TY TL+ G C++
Sbjct: 268 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKE 327
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G V E+ L + M G+ D +T+N LI G GK++E KLL M G P+ +Y
Sbjct: 328 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 387
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
++ G R +A L M+ +SP+ ++Y ++ GL
Sbjct: 388 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 429
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 12/232 (5%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF-Y 219
P+V T+ +++ A + K G +DA LLKGLC + A
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE---GIDADTVTFNILIS 276
VL + C P+V +Y+ L+ GLC++ +EA LL M + G D V++N +++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 277 GLRKQG--------KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
G K+G +++ M++L M G P+ +Y +L+G + EA + +
Sbjct: 210 GFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 269
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + + P+ V+Y L++ LC + + M ++G P + +R ++
Sbjct: 270 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLL 321
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 136/321 (42%), Gaps = 38/321 (11%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF---DAIEDIMQ 115
TE KIF ++ ++ P+ A Y ++ + R + + D+M
Sbjct: 296 TEARKIFDSM--------------TKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMV 341
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
RI V+ D YN + +AG++ +A + L M S P + T+ ++N
Sbjct: 342 RIGVKP-----DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 396
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ ++ GV + NI+L+GL AA + K + + T
Sbjct: 397 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 456
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y+ ++HGLC+ +EA + + + + +T TFNI+I L K G+++E L
Sbjct: 457 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHS 516
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
G P+ +Y + L+++ E +L F+S ++ +G +
Sbjct: 517 ANGLVPDVRTYSLMAENLIEQGSLEELDDL------------FLSMEE--NGCSADSRM- 561
Query: 356 DVDWVLKKMVQQGFVPRMGMW 376
++ +++K++Q+G + R G +
Sbjct: 562 -LNSIVRKLLQRGDITRAGTY 581
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 127/328 (38%), Gaps = 5/328 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ +L + + P I L + + PN Y+ ++N L + R I
Sbjct: 243 DCMTYNSILHGYCSSGQPKEAIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 301
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNL 172
+ L D Y + GR+ ++ E LFD M P + T+N +++
Sbjct: 302 FDSMTKRGL--EPDIATYRTLLQGHCKEGRVIES-EKLFDLMVRIGVKPDIITYNTLIDG 358
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
A E + S +GV+ D L+ G C ++ A + E PN
Sbjct: 359 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 418
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ TY+ ++ GL A L + G + T+NI++ GL K +E +++ +
Sbjct: 419 IITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 478
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+ + ++ ++ LL R EAK+L + P +Y + L Q
Sbjct: 479 NLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQG 538
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+E++D + M + G M IV
Sbjct: 539 SLEELDDLFLSMEENGCSADSRMLNSIV 566
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 108/226 (47%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA+E L M P+ T+N +L+ S++ E G GVE D N
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ LC+NG A + D K+ EP++ TY TL+ G KG + E LL+ M G
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D FNILI KQ KV+E M + +M+ G PN +Y V+ L +A
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+MI E ++P+ + Y LIH LC + + ++ +M+ +G
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGI 472
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 127/301 (42%), Gaps = 4/301 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + +T ++ L KR DI+ R E C D F ++ R
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSC-MPDVFSCTILLKGLCDENR 173
Query: 144 ISKAIETLFDMP---SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+A+E L M P V ++ V+N + Y + D
Sbjct: 174 SQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVT 233
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ ++ LC+ ++ A VL K PN TY++++HG C +EA G L++M
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMR 293
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+G++ D VT+N L+ L K G+ E K+ + M +G P+ A+Y +L G K
Sbjct: 294 SDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALV 353
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E L+ M+ + P + LI Q+ V++ V KM Q G P + + ++
Sbjct: 354 EMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413
Query: 381 G 381
G
Sbjct: 414 G 414
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G KA T +M P V T++ ++ L + + + T+ K GV +
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L G C + + A L + EP+V TY++LM LC+ G EA + + M
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G++ D T+ L+ G +G + E LL+ M G +P+ + ++ +++ E
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDE 389
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A + +M ++P+ V+Y +I LC V+D ++M+ +G P + ++ ++
Sbjct: 390 AMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 14/279 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM--- 140
R +P+ ++ ++I A+ ++ D + +++ G NV+ YG +
Sbjct: 364 RNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMR-------QHGLNPNVVT-YGAVIGI 415
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+G + A+ M P++ + +++ L + + + + G+ ++
Sbjct: 416 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLN 475
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N ++ C+ G + + + D + +PNV TYSTL+ G C G ++EA LL
Sbjct: 476 TIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLS 535
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M S G+ D VT+N LI+G + ++++ + L + M G PN +Y +L GL +
Sbjct: 536 SMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTR 595
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
R AKEL + +Y ++HGLC L ++
Sbjct: 596 RTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDE 634
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 147/333 (44%), Gaps = 15/333 (4%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD-AIED 112
D +S T V+ F D S ++ R+ +P+ Y+ II L + + D A+E
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRR-ISPDVVTYSSIIAALCKGQAMDKAMEV 253
Query: 113 IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS-----KAIETLFDMPSYNCWPSVKTFN 167
+ +K +G N + + G S +AI L M S P V T+N
Sbjct: 254 LTTMVK--------NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYN 305
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+++ L E + I+ S K G+E D LL+G G L +LD +
Sbjct: 306 SLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRN 365
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
P+ ++ L+ ++ V+EA + +M G++ + VT+ +I L K G V++
Sbjct: 366 GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDA 425
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
M E+M +G PN Y +++ L ++ +A+EL+ M+ + + + + +IH
Sbjct: 426 MLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHS 485
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C + V + + + MV+ G P + + ++
Sbjct: 486 HCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P FN+++ + E +++ + G+ + ++ LC++G+++ A
Sbjct: 369 PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLY 428
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
++ + PN+ Y++L+H LC ++A L+ M GI +T+ FN +I K
Sbjct: 429 FEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK 488
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G+V E KL + M G PN +Y ++ G + EA +L+ M M P V+
Sbjct: 489 EGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVT 548
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI+G C ++D + K+MV G P + + I+
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 588
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 4/215 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF-Y 219
P+V T+ +++ A + K G ++A LLKGLC + A
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE---GIDADTVTFNILIS 276
VL + +C P+V + + L+ GLC++ +EA LL M + G D V++ +I+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
G K+G ++ M + P+ +Y ++ L + +A E++ M+ + P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ ++Y ++HG C+ + ++ LKKM G P
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEP 299
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 136/313 (43%), Gaps = 23/313 (7%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN +YT +I+ L ++D E+++ + +C + F+N I GR+ ++
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL--NTIFFNSIIHSHCKEGRVIES 495
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E LFD M P+V T++ +++ A E + +S +G++ D N L+
Sbjct: 496 -EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C ++ A + E PN+ TY+ ++ GL A L + G
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQL 614
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T+NI++ GL K +E +++ + + + ++ ++ LL R EAK+L
Sbjct: 615 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 674
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVED-------------------VDWVLKKMVQQ 367
+ + P +Y + L Q L+E+ ++ +++K++Q+
Sbjct: 675 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 734
Query: 368 GFVPRMGMWREIV 380
G + R G + ++
Sbjct: 735 GDITRAGTYLSMI 747
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 14/245 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF------FYNVIKIY 137
R PN Y+ +I+ A + D ++ + FS G + +I Y
Sbjct: 504 RIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM-------FSVGMKPDCVTYNTLINGY 556
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
++ R+ A+ +M S P++ T+N++L L + + +Y K G +++
Sbjct: 557 CRVS-RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLE 615
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
NI+L GLC+N + A + + + RT++ ++ L + G +EA L
Sbjct: 616 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFA 675
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+ + G+ D T++++ L +QG +EE L M+ GC NS ++ LL +
Sbjct: 676 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 735
Query: 318 RFPEA 322
A
Sbjct: 736 DITRA 740
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 73/189 (38%), Gaps = 39/189 (20%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P V TY L+ C G ++ F L + +G + +TF L+ GL + + M +
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 291 -LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV----------------------- 326
L RM C P+ S +L GL D+ R EA EL+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204
Query: 327 ---------------GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ R+SP V+Y +I LC + ++ VL MV+ G +P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264
Query: 372 RMGMWREIV 380
+ I+
Sbjct: 265 NCMTYNSIL 273
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 149/296 (50%), Gaps = 17/296 (5%)
Query: 90 NEALYTLI-INKLAQAKRFDAI---EDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRI 144
N +Y+L + +++ A+R+ + ED+M D YN + IYG + G
Sbjct: 316 NTIMYSLCRLGRVSDARRYLDVMVNEDLM-----------PDLVSYNTL-IYGYSRLGNF 363
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
++A+ ++ S N PSV T+N +++ +G+ K G+ D IL
Sbjct: 364 AEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTIL 423
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++G C+ GNL A + DE + +P+ Y+T + G + GN +AFG+ E M++EG
Sbjct: 424 VRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGF 483
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+N+LI+GL K G ++ +L+++M+ +G P+ +Y +++ L +A+E
Sbjct: 484 PPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEE 543
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ M+ + + PS V+Y LIH + ++ +M +G P + + ++
Sbjct: 544 VFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALI 599
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 165/396 (41%), Gaps = 21/396 (5%)
Query: 12 RQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRD- 70
R S S T+ K F P +++ D+ H P +L++ ++++
Sbjct: 6 RPSSTTFFSKTITLFLKPHFRFY-PFSTNPQIDNSVNPHFHSAVTQPEFLLRVLNSVKHR 64
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLA----------------QAKRFDAIEDIM 114
P++ + K+ +++ +E + I++ LA + K + D++
Sbjct: 65 PLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVL 124
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
I + S +I+++ + K + + M + P V+ N VL LL
Sbjct: 125 VGIGCGRNSEVSVKLLDLLIQVFAKKL-ILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLK 183
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
+ E++ +Y+ K + N ++ C+ G + A VLD C+PN
Sbjct: 184 DKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDV 243
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
+Y+ L++GL KG + A L+E+M G+ T+N LI G K+ EE L M
Sbjct: 244 SYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREM 303
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
G+G P +Y ++Y L R +A+ + M+ E + P VSY LI+G
Sbjct: 304 LGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNF 363
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV--GCVTFGKD 388
+ + ++ + VP + + ++ GC T D
Sbjct: 364 AEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLD 399
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 1/250 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A+E L M + C P+ ++N+++N L + + + + LG+++ A
Sbjct: 221 GEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTY 280
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L++G C+ E A + E + P V TY+T+M+ LC G V +A L+ M +
Sbjct: 281 NPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVN 340
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
E + D V++N LI G + G E + L ++ K P+ +Y ++ G
Sbjct: 341 EDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDI 400
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR-MGMWREIV 380
AK + MI + P V++ L+ G C + + +M+ +G P + IV
Sbjct: 401 AKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIV 460
Query: 381 GCVTFGKDNR 390
G + G ++
Sbjct: 461 GELKLGNPSK 470
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D N+L+ GLC+ GN + A ++ + + P+ TY++++H G + +A
Sbjct: 482 GFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKA 541
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ M +GI VT+ +LI +G+++ K + M+ KG PN +Y ++YG
Sbjct: 542 EEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYG 601
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L + A L M + +SP+ +Y LI+ N + +D + K M+ + P
Sbjct: 602 LCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKP 660
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
Query: 135 KIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+I G + G SKA +M + P + T+N+++N L + + + G
Sbjct: 458 RIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEG 517
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ D ++ +G L A V + K+ P+V TY+ L+H +G ++ A
Sbjct: 518 IVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAK 577
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+ M+ +G+ + +T+N LI GL K+ ++ L M+ KG PN +Y ++
Sbjct: 578 KYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINEN 637
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ + + +A +L M+ + P ++ L+ L
Sbjct: 638 SNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHL 672
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + + P+ Y ++IN L + FD +++Q++++E + D Y I ++G
Sbjct: 479 KAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIV--PDHVTYTSIIHAHLISG 536
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQGIYTSAAKLGVE 195
+ KA E DM PSV T+ ++++ L + K + E+Q GV
Sbjct: 537 LLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQ-------DKGVS 589
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV---EEA 252
+ N L+ GLC+ ++ A+ + E + PN TY+ L++ E N+ ++A
Sbjct: 590 PNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN---ENSNLQYWQDA 646
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
L + M I D+ T + L+ L K K+ ++L
Sbjct: 647 LKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ + + + G Y + G
Sbjct: 85 SGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYF 144
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVD 264
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ M+ + + P ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 265 LAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLI 324
Query: 381 -GCVTFG 386
GC G
Sbjct: 325 DGCCKEG 331
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 132/255 (51%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 143 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 199
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCK 259
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + + M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 260 NGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFT 319
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A + RMI + V+Y LI GLC + D + +L++M+
Sbjct: 320 YTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 366 QQGFVPRMGMWREIV 380
G P +G + I+
Sbjct: 380 SVGLKPDIGTYTMII 394
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 108/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 210 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEI 269
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D T+ LI G K
Sbjct: 270 YKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCK 329
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ K +RM + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 330 EGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGT 389
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEMQRNGHVP 420
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 209 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL--IPNGVTFTTLIXGHCKNGRVDLA 266
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 267 MEIYKXMLSQSLLPDLITYN-----------------------------------TLIYG 291
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ A ++DE + +P+ TY+TL+ G C++G+++ AF +RM I D
Sbjct: 292 LCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLD 351
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G P+ +Y ++ K + +L+
Sbjct: 352 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLK 411
Query: 328 RMICERMSPSFVSYKKLIHG 347
M PS V+Y L++G
Sbjct: 412 EMQRNGHVPSVVTYNVLMNG 431
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + AIE + W T VL L+ K + + G Y + G
Sbjct: 82 TGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 141
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 142 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAML 201
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 202 ASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVD 261
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ RM+ + + P ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 262 FAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 321
Query: 381 -GCVTFG 386
GC G
Sbjct: 322 DGCCKEG 328
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + E + +
Sbjct: 140 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKS 198
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 199 AMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNG 258
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + +RM S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 259 RVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYT 318
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 319 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSV 378
Query: 368 GFVPRMGMWREIV 380
G P G + I+
Sbjct: 379 GLKPDTGTYTMII 391
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 108/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 207 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEI 266
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D T+ LI G K
Sbjct: 267 YKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 326
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 327 EGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGT 386
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G P
Sbjct: 387 YTMIINEFCKKGDVWKGSKLLKEMQRNGHAP 417
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 117/259 (45%), Gaps = 37/259 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A+
Sbjct: 207 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGL--IPNGVTFTTLIDGHCKNGRVDFAM 264
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M S + P + T+N L+ GL
Sbjct: 265 EIYKRMLSQSLLPDLITYN-----------------------------------TLIYGL 289
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G+L+ A ++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 290 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 349
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V + LISGL ++G+ + K+L M G P++ +Y ++ K + +L+
Sbjct: 350 VAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 409
Query: 329 MICERMSPSFVSYKKLIHG 347
M +PS V+Y L++G
Sbjct: 410 MQRNGHAPSVVTYNVLMNG 428
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 129/262 (49%), Gaps = 7/262 (2%)
Query: 137 YGNMAGRISKAIET------LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YG + + KA ET L + ++ P V + +++ L K G+ +Y+
Sbjct: 201 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMI 260
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G+ + N L+ G C GNL+ AF +L+E +N P+V T++ L+ L ++G ++
Sbjct: 261 VKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKID 320
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA L E M+ + + + VT+ LI GL K +E + L ++MK +G P+ SY +L
Sbjct: 321 EAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 380
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
L R AK+ ++ + + +Y +I+GLC L DV + KM +G +
Sbjct: 381 DALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCM 440
Query: 371 PRMGMWREIVGCVTFGKDNRNR 392
P ++ I+ C F KD ++
Sbjct: 441 PDAITFKTII-CALFEKDENDK 461
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P F+ +L+ LV K Y + ++ GV + C LNIL+ C ++ AF V
Sbjct: 91 PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
K+ P+ T +TL+ GLC G ++ A +++ ++G D V++ LI+GL K
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ + +LL +++G P+ Y +++ L KR +A +L MI + +SP+ +
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LI+G C +++ +L +M + P
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINP 301
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 168 LVLNLLVSAKLY-GEIQG---IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE 223
+ LN L+ + GEI+ + G ++D L+ GLC+ G +A +L +
Sbjct: 164 ITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRK 223
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283
+ +P+V Y+T++H LC+ V +A L M +GI + T+N LI G G
Sbjct: 224 LEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGN 283
Query: 284 VEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKK 343
++E LL MK K P+ ++ ++ L + + EA L M + M P+ V+Y
Sbjct: 284 LKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTS 343
Query: 344 LIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
LI GLC +E + KKM +QG P
Sbjct: 344 LIDGLCKNHHLERAIALCKKMKEQGIQP 371
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 39/283 (13%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P+ +YT II+ L + KR D+ + V+ + + F YN + IYG + G + +A
Sbjct: 231 PDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGIS--PNVFTYNTL-IYGFCIMGNLKEA 287
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L +M N P V TFN IL+
Sbjct: 288 FSLLNEMKLKNINPDVYTFN-----------------------------------ILIDA 312
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L + G ++ A + +E +N PN+ TY++L+ GLC+ ++E A L ++M+ +GI D
Sbjct: 313 LGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 372
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++ IL+ L K G++E + + + KG + N +Y ++ GL F + +L
Sbjct: 373 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKS 432
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+M + P +++K +I L + + + L++M+ +G +
Sbjct: 433 KMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGLL 475
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P++ T N+++N ++ + K G DA LN L+KGLC G ++ A Y
Sbjct: 126 PNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYF 185
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+ Q + + +Y TL++GLC+ G + LL ++E + D V + +I L K
Sbjct: 186 HDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCK 245
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+V + L M KG PN +Y ++YG EA L+ M + ++P +
Sbjct: 246 NKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYT 305
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ LI L + +++ + ++M + P + + ++
Sbjct: 306 FNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLI 345
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 77/177 (43%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L L +N + + +F PN+ T + L++ C ++ AF + + G
Sbjct: 99 ILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRG 158
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D +T N LI GL G+++ + +++ +G + SY ++ GL
Sbjct: 159 YHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVA 218
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ ++ + P V Y +IH LC K V D + +M+ +G P + + ++
Sbjct: 219 RLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLI 275
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 122/237 (51%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
++ AI++ M P + F +L LV K Y + ++ G++ + LNI
Sbjct: 30 LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C + +AF V + K +P++ TY+TL+ GLC G V+E+ +R+ S+G
Sbjct: 90 LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D V++ LI+GL K G+ ++LL +++G+ C P+ Y ++ GL K +A
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+L M +R+ P+ V+Y LI+G C ++ +L +MV + P + + +V
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLV 266
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 147/350 (42%), Gaps = 50/350 (14%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL---AQAKRFDAIED--IMQRIKV 119
+ +LR S SV + K Y P+ YT +I L Q K D + Q IK+
Sbjct: 94 YCHLRQINSAFSVFAKILKL-GYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKL 152
Query: 120 EKLCRFSDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+ + S G N + KI G+ A+ L + C P V +N +++ L KL
Sbjct: 153 DHV---SYGTLINGLCKI-----GQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKL 204
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ +Y + V + L+ G C G L+ AF +L+E +N PNV T++T
Sbjct: 205 VRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNT 264
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN-------------------------- 272
L+ GLC++G + EA L+ M EG+ D T+N
Sbjct: 265 LVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMG 324
Query: 273 ---------ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
++ISGL K ++E M L E M+ + P+ +Y ++ GL R A
Sbjct: 325 VTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSAL 384
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ V M P+ ++Y LI LC V+ +LKK+ QG M
Sbjct: 385 KYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANM 434
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 120/232 (51%), Gaps = 1/232 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+N +++ K G+ + ++ A++GV D ++++ GL + L+ A +
Sbjct: 292 PDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDL 351
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ +N P+V YS+L+ GLC+ G + A ++ M G + +T+ LI L K
Sbjct: 352 FEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCK 411
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+V++ + LL+++K +G N +Y ++ GL R +A+++ ++ + + V+
Sbjct: 412 SHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVT 471
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
Y +I+GLC + L ++ +L KM +G VP + I+ F KD ++
Sbjct: 472 YSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAF-FEKDMNDK 522
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 139/281 (49%), Gaps = 2/281 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K+ NPN + +++ L + + + ++ + E + D F YN + +
Sbjct: 253 KNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVG--PDVFTYNALMDGYFLVKEA 310
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA M V +++++++ L K+ E ++ V D + L
Sbjct: 311 GKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSL 370
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC++G + +A +DE + PNV TY++L+ LC+ V++A LL++++ +GI
Sbjct: 371 IDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGI 430
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
A+ T+NIL+ GL K G++ + K+ + + KG + +Y ++ GL + F EA
Sbjct: 431 QANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALT 490
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
L+ +M + P ++Y+ +I+ + + + + +L++M+
Sbjct: 491 LLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T N+++N + ++ KLG + D L++GLC NG ++ + D
Sbjct: 86 TLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRL 145
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
Q + + +Y TL++GLC+ G A LL ++E E D V +N +I GL K V
Sbjct: 146 VSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLV 205
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ L M K +PN +Y ++YG + +A L+ M+ + ++P+ ++ L
Sbjct: 206 RDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTL 265
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ GLC + + + ++ M+++G P
Sbjct: 266 VDGLCKEGKMREAKSLVAVMMKEGVGP 292
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 72/168 (42%)
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
NL A + + P + + ++ L + + L +RME GI ++ +T N
Sbjct: 29 NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
ILI+ ++ + ++ G P+ +Y ++ GL + E+ R++ +
Sbjct: 89 ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ VSY LI+GLC +L+K+ + P + M+ I+
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTII 196
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 132/253 (52%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ ++G + + +++FD + + PSV +FN ++N + E +
Sbjct: 137 YFFNIL-MHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ G NIL+ G + G + A V D K P+V +++TLM+G + G
Sbjct: 126 ENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ E F L M++ G+ D T+++LI+GL K+ K+++ L + M KG PN ++
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 111/209 (53%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K G+ N L+ G + G+L F
Sbjct: 135 SLYFFNILMHGFVKE---GEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M +G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + P+ +Y ++YGL K +A++L+ MI + + P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 134/272 (49%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G +++ M +
Sbjct: 153 RLAQS-VFDAITKWGLRPSVVSFNTLMNGY----IKL-----GDLNEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G+ P
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYKP 414
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 72 ISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIMQR 116
+S +++N Y K D N P+ Y+++IN L + + D +
Sbjct: 172 VSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDE 231
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+ + L +G + + GR+ A+E M S + P + T+N ++ L
Sbjct: 232 MLDKGLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 289
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ Q + G++ D L+ G C+ G+LE AF K+N + Y
Sbjct: 290 GDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+ L+ GLC++G +A +L M S G+ + T+ ++I+ K+G V G KLL+ M+
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Query: 297 KGCYPNSAS 305
G P+ +
Sbjct: 410 DGYKPSVVT 418
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 152/318 (47%), Gaps = 9/318 (2%)
Query: 46 HAYKLNH--KDW---LSPTEVLKIFSNLRDPISVISVL--NQYSKRKDYNPNEALYTLII 98
+YK+ K W L+P + + S DP + + Q + ++ N Y I
Sbjct: 32 QSYKIQPPIKPWPHRLNPKLLSSLISRQHDPHFSLQIFLHAQNHHKPPFSHNPQTYQAIF 91
Query: 99 NKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYN 158
KL++ + F IE ++ ++ + VI+ YG +AG+ +A++T + S+
Sbjct: 92 LKLSKFRCFSEIESLLAGLRSSPPHCCGEEPIVTVIRGYG-LAGKPVRALKTFLRIESFG 150
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA-KLGVEIDACCLNILLKGLCENGNLEAA 217
PSV++ N +LN LV K Y ++ + + V + NILLK LC+ +E A
Sbjct: 151 IRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCNILLKALCKGNEVEVA 210
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
VLDE P PNV +Y+T++ G +G+++ A + + G D ++ +L+ G
Sbjct: 211 VKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDG 270
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
+ GK+ + +++++ M+ G PN +Y ++ +K+ EA L+ MI + +
Sbjct: 271 FCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVG 330
Query: 338 FVSYKKLIHGLCNQKLVE 355
K++ LC + VE
Sbjct: 331 SELCCKVVDLLCEEGNVE 348
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A ++ L+ LC+ G + A V DEF K + ++ TY+TL+ GLCE G + EA L +
Sbjct: 367 AVVVSTLIHWLCKKGKVLEARNVFDEFGKGSVA-SLLTYNTLIAGLCEGGELCEAARLWD 425
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
M +G+ + T+N+LI G K G +EG+++LE M C PN ++Y ++ G+L
Sbjct: 426 DMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGIL 482
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 6/210 (2%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS--AAKLGVEIDAC 199
G++ AI + M P+ T+ +++ K GE + A L V + C
Sbjct: 275 GKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELC 334
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN-VRTYSTLMHGLCEKGNVEEAFGLLER 258
C + L LCE GN+E A + ++NC N STL+H LC+KG V EA + +
Sbjct: 335 CKVVDL--LCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDE 392
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
+G A +T+N LI+GL + G++ E +L + M KG PN+ +Y ++ G
Sbjct: 393 F-GKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGN 451
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGL 348
E ++ M+ R P+ +Y LI G+
Sbjct: 452 AKEGIRVLEEMLENRCLPNKSTYTILIDGI 481
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFNILISGLRKQGKVEEGMK 289
P+VR+ + L++ L + AF + + E + + V+ NIL+ L K +VE +K
Sbjct: 153 PSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCNILLKALCKGNEVEVAVK 212
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+L+ M G G PN SY VL G + + A ++ ++ SP SY L+ G C
Sbjct: 213 VLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFC 272
Query: 350 NQKLVEDVDWVLKKMVQQGFVP 371
+ D V+ M G P
Sbjct: 273 RLGKLVDAIRVMDIMEDNGVEP 294
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 24/231 (10%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKR----FDAIEDIMQR---I 117
L D I V+ ++ PNE Y ++I + K+ + IED++ + +
Sbjct: 274 LGKLVDAIRVMDIMED----NGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVV 329
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCW--PSVKTFNLVLNLLVS 175
E C+ D G + KA E + NC +V L+ L
Sbjct: 330 GSELCCKVVDLLCEE---------GNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKK 380
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
K+ E + ++ K G N L+ GLCE G L A + D+ ++ PN T
Sbjct: 381 GKVL-EARNVFDEFGK-GSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFT 438
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
Y+ L+ G C+ GN +E +LE M + T+ ILI G+ G +++
Sbjct: 439 YNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGMKQ 489
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 131/253 (51%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + ++ PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 196 AMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ + G + A V D K + P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M+ G+ D T+++LI+GL K+ K+++ L + M KG PN ++
Sbjct: 186 DLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLXP 309
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K + N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M +G+ + VTF LI G
Sbjct: 192 RLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + P+ +Y ++YGL K +A++L+ MI + + P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M
Sbjct: 153 RLAQS-VFDAITKWSLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNAMQVSGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G++P
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 2/218 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D + + + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLV--PNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + G+ D L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ GLC++G +A +L M + G+ +
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
T+ ++I+ K+G V G KLL+ M+ G P+ +
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 145/306 (47%), Gaps = 9/306 (2%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-------YNVIKIYGN 139
++ NE Y ++IN L + R + ++++ I+ EK + DGFF Y+++
Sbjct: 138 FSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKE-KEKDGFFVKGNVVMYSIVIDCLC 196
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G + + E +M P+ T+ ++ L + E G+ + G+++
Sbjct: 197 RNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVY 256
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+L+ GLC+NG L A + DE + EPN+ T + LM G C KGNV+ A L + +
Sbjct: 257 VFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI 316
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G D T+N+ I G K G+V + +++ + M +G PN +Y ++ L
Sbjct: 317 GEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEV 376
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A E+V M ++P V+ L+ GLC K ++ + ++V+ G P + + +
Sbjct: 377 SGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTIL 436
Query: 380 V-GCVT 384
+ GC T
Sbjct: 437 IHGCCT 442
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 14/293 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGR 143
+ Y PN T ++ D ++ I R D + YNV I+G GR
Sbjct: 284 RGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKR--DVWTYNVF-IHGYCKVGR 340
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY-----TSAAKLGVEIDA 198
+ A+ +M P++ T+N +++ L A GE+ G + + L +I
Sbjct: 341 VRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKA---GEVSGAWEIVKTMHRSGLTPDIVT 397
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
CC ILL GLC++ L+ A + ++ + P+V +Y+ L+HG C + EA LL
Sbjct: 398 CC--ILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRD 455
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M + + VT++ LI GL + G++ +LL M KG P++ +Y +L L K+
Sbjct: 456 MHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQH 515
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA L +MI + P + Y +I G C + +++ + ++M + VP
Sbjct: 516 LDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVP 568
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 8/205 (3%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
I+ K G +D LN +LKGLC NG + A DE N +Y L++GLC
Sbjct: 94 IFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLC 153
Query: 245 EKGNVEEAFGLLERM--------ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
E G V EA LL + + + + V ++I+I L + G V+EG + M G
Sbjct: 154 ENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMG 213
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
G PN +Y ++ GL +F E LV MI + S + LI GLC ++ +
Sbjct: 214 NGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVE 273
Query: 357 VDWVLKKMVQQGFVPRMGMWREIVG 381
+ +MV +G+ P + ++G
Sbjct: 274 AREMFDEMVNRGYEPNIVTCTALMG 298
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG +S A E + M P + T ++L+ L +K + ++ + G+ D
Sbjct: 373 AGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWS 432
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
IL+ G C + + A +L + +N P++ TYS L+ GLC G + A+ LL M
Sbjct: 433 YTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMH 492
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G DT+T++IL+ L K+ ++E + L +M +G P+ Y ++ G +R
Sbjct: 493 VKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERID 552
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGL 348
EA L M + + P V+Y L + +
Sbjct: 553 EAINLFREMHMKNLVPDIVTYTILFNAV 580
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 4/200 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R P+ ++++ L ++KR D + ++ L D + Y ++ I+G R
Sbjct: 388 RSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLT--PDVWSYTIL-IHGCCTSR 444
Query: 144 -ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ +A+ L DM N P + T++ +++ L + + G D +
Sbjct: 445 RMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYS 504
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
ILL L + +L+ A ++ ++ K+ EP+V Y+ ++ G C+ ++EA L M +
Sbjct: 505 ILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMK 564
Query: 263 GIDADTVTFNILISGLRKQG 282
+ D VT+ IL + + K G
Sbjct: 565 NLVPDIVTYTILFNAVFKSG 584
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT++I+ ++R ++++ + ++ L Y+ + +GRIS A
Sbjct: 428 PDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNL--VPHIVTYSCLIDGLCRSGRISNAW 485
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +M P T++++L+ L + E ++ K G+E D C I++ G
Sbjct: 486 RLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGY 545
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
C++ ++ A + E +N P++ TY+ L + + + G+
Sbjct: 546 CKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGS 585
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ G NIL+ + G + A V D K P+V +++TLM+G + G
Sbjct: 126 ENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ E F L M++ G+ D T+++LI+GL K+ K+++ L + M KG PN ++
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K G+ N L+ G + G+L F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M +G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + P+ +Y ++YGL K +A++L+ MI + + P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+Y LI G C + +E K+M+++
Sbjct: 312 FTYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G +++ M +
Sbjct: 153 RLAQS-VFDAITKWGLRPSVVSFNTLMNGY----IKL-----GDLNEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G+ P
Sbjct: 383 TYTMIINEFCKKGDVWXGSKLLKEMQRDGYKP 414
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 72 ISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIMQR 116
+S +++N Y K D N P+ Y+++IN L + + D +
Sbjct: 172 VSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDE 231
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+ + L +G + + GR+ A+E M S + P + T+N ++ L
Sbjct: 232 MLDKGLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 289
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ Q + G++ D L+ G C+ G+LE AF K+N + Y
Sbjct: 290 GDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+ L+ GLC++G +A +L M S G+ + T+ ++I+ K+G V G KLL+ M+
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQR 409
Query: 297 KGCYPNSAS 305
G P+ +
Sbjct: 410 DGYKPSVVT 418
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 136/299 (45%), Gaps = 2/299 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN ++ + + A+ D DI +++ L D Y + GR+ A
Sbjct: 27 SPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLS--PDAVSYGALIDALCKLGRVDDA 84
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
M + P++ F+ ++ L S + +++ ++ +G+ + N +L
Sbjct: 85 EVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCN 144
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G + ++D P+V +Y+TL+ G C G ++EA LLE M S G+ +
Sbjct: 145 LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPN 204
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+ ++N L+ G K G+++ L +M G P +Y +L+GL KRF EAKEL
Sbjct: 205 SFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYL 264
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
MI +Y +++GLC V++ + + + +G + + ++G + G
Sbjct: 265 NMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKG 323
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 115/244 (47%), Gaps = 1/244 (0%)
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
YGN G +S+ + L M + P+ FN+ + + + I+ + G+
Sbjct: 5 YGN-KGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSP 63
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
DA L+ LC+ G ++ A ++ + PN+ +S+L++GLC E+ L
Sbjct: 64 DAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELF 123
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M + GI + V FN ++ L K+G+V EG +L++ ++ G P+ SY ++ G
Sbjct: 124 FEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLA 183
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
EA +L+ M+ + P+ SY L+HG C ++ + +KM+ G P + +
Sbjct: 184 GTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTY 243
Query: 377 REIV 380
I+
Sbjct: 244 NTIL 247
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 131/302 (43%), Gaps = 12/302 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
++ +P+ Y +I+ L + R D E +K ++ ++G N++ + G
Sbjct: 57 RQHGLSPDAVSYGALIDALCKLGRVDDAE-----VKFNQM--INEGVTPNIVVFSSLVYG 109
Query: 143 RIS-----KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
S K E F+M + P++ FN +L L E Q + S +GV D
Sbjct: 110 LCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPD 169
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+ G C G ++ A +L+ +PN +Y+TL+HG C+ G ++ A+ L
Sbjct: 170 VISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFR 229
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+M S GI VT+N ++ GL + + E +L M G +Y +L GL
Sbjct: 230 KMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSN 289
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
EA ++ + + + + +++ +I L ED + + G VP + +R
Sbjct: 290 CVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYR 349
Query: 378 EI 379
+
Sbjct: 350 VV 351
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 130/295 (44%), Gaps = 8/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDI---MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PN +++ ++ L +++ +E++ M + + F + N+ K GR+
Sbjct: 98 PNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCK-----EGRVM 152
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+ + + P V ++N +++ A E + +G++ ++ N LL
Sbjct: 153 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLL 212
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C+ G +++A+ + + P V TY+T++HGL + EA L M + G
Sbjct: 213 HGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 272
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
T+N +++GL K V+E K+ + + KG N ++ ++ LL R +A +L
Sbjct: 273 WGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDL 332
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P V+Y+ + L + +E+ D + M + G P M +V
Sbjct: 333 FAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 387
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+ F YN + AGRI A M S P V T+N +L+ L K + E + +Y
Sbjct: 204 NSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELY 263
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G + N +L GLC++ ++ AF + + + N+ T++ ++ L +
Sbjct: 264 LNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKG 323
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G E+A L + + G+ D VT+ ++ L ++G +EE L M+ G PNS
Sbjct: 324 GRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQML 383
Query: 307 QEVLYGLLDKKRFPEAKELVGRM 329
++ LL + A + ++
Sbjct: 384 NALVRRLLHRGDISRAGAYLSKL 406
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 124/285 (43%), Gaps = 8/285 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN + I+ L + R + ++ I E + D YN + +AG I +A
Sbjct: 132 HPNIVFFNTILCNLCKEGRVMEGQRLVDSI--ECMGVRPDVISYNTLIDGHCLAGTIDEA 189
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNIL 204
+ L M S P+ ++N +L+ A G I Y+ K+ G+ N +
Sbjct: 190 SKLLEGMVSVGLKPNSFSYNTLLHGYCKA---GRIDSAYSLFRKMLSNGITPGVVTYNTI 246
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GL + A + + + TY+T+++GLC+ V+EAF + + + S+G+
Sbjct: 247 LHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGL 306
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ +TF I+I L K G+ E+ M L + G P+ +Y+ V L+++ E
Sbjct: 307 QLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDS 366
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L M +P+ L+ L ++ + L K+ ++ F
Sbjct: 367 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNF 411
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 72/142 (50%)
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++HG KG + E LL M + GI + FNI S K G +++ M + +M+ G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
P++ SY ++ L R +A+ +MI E ++P+ V + L++GLC+ E V+
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 359 WVLKKMVQQGFVPRMGMWREIV 380
+ +M+ G P + + I+
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTIL 142
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 77/203 (37%), Gaps = 35/203 (17%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L G G L +L+ PN ++ + G +++A + +M G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL--LDK----- 316
+ D V++ LI L K G+V++ +M +G PN + ++YGL +DK
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 317 ----------------------------KRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
R E + LV + C + P +SY LI G
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180
Query: 349 CNQKLVEDVDWVLKKMVQQGFVP 371
C +++ +L+ MV G P
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKP 203
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/188 (18%), Positives = 78/188 (41%), Gaps = 2/188 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P Y I++ L Q KRF +++ + + ++ + YN I + + +A
Sbjct: 238 PGVVTYNTILHGLFQTKRFSEAKELYLNM-INSGTKWGI-YTYNTILNGLCKSNCVDEAF 295
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + S ++ TF +++ L+ + ++ + G+ D ++ + L
Sbjct: 296 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENL 355
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
E G+LE + K PN + + L+ L +G++ A L +++ +
Sbjct: 356 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEA 415
Query: 269 VTFNILIS 276
T ++LIS
Sbjct: 416 STTSMLIS 423
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 131/253 (51%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + ++ PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 196 AMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ + G + A V D K + P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M+ G+ D T+++LI+GL K+ K+++ L + M KG PN ++
Sbjct: 186 DLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLXP 309
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K + N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M +G+ + VTF LI G
Sbjct: 192 RLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + P+ +Y ++YGL K +A++L+ MI + + P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M
Sbjct: 153 RLAQS-VFDAITKWSLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNAMQVSGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G++P
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 2/218 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D + + + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLV--PNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + G+ D L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ GLC++G +A +L M + G+ +
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
T+ ++I+ K+G V G KLL+ M+ G P+ +
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ G NIL+ + G + A V D K P+V +++TLM+G + G
Sbjct: 126 ENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ E F L M++ G+ D T+++LI+GL K+ K+++ L + M KG PN ++
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K G+ N L+ G + G+L F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M +G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + P+ +Y ++YGL K +A++L+ MI + + P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+Y LI G C + +E K+M+++
Sbjct: 312 FTYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G +++ M +
Sbjct: 153 RLAQS-VFDAITKWGLRPSVVSFNTLMNGY----IKL-----GDLNEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G+ P
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYKP 414
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 72 ISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIMQR 116
+S +++N Y K D N P+ Y+++IN L + + D +
Sbjct: 172 VSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDE 231
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+ + L +G + + GR+ A+E M S + P + T+N ++ L
Sbjct: 232 MLDKGLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 289
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ Q + G++ D L+ G C+ G+LE AF K+N + Y
Sbjct: 290 GDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+ L+ GLC++G +A +L M S G+ + T+ ++I+ K+G V G KLL+ M+
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Query: 297 KGCYPNSAS 305
G P+ +
Sbjct: 410 DGYKPSVVT 418
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 133/255 (52%), Gaps = 9/255 (3%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D + YN + + G++ +A L + P+V T+N +++ G + ++
Sbjct: 272 DVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLID--------GYAKHVF 323
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ +GV D NI++ LC+ +E A + E ++N PN TY++L+ GLC+
Sbjct: 324 NAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKS 383
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G + A+ L++ M G A+ +T+N LI+GL K G++++ + L+ +MK +G P+ +
Sbjct: 384 GRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTL 443
Query: 307 QEVLYGLLDK-KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+L+GLL K KR A+ L ++ + P+ +Y +I+G C + L+++ + KM
Sbjct: 444 NILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKME 503
Query: 366 QQGFVPRMGMWREIV 380
G P ++ I+
Sbjct: 504 DSGCSPNAITFKIII 518
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 143/289 (49%), Gaps = 11/289 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K NP+ +Y +++ L + + ++++ I K C + YN + A +
Sbjct: 267 KAINPDVYIYNTLVDALHKEGKVKEAKNVLAVI--VKTCLKPNVITYNTL--IDGYAKHV 322
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+ + P V ++N+++N L K E +Y + + + N L
Sbjct: 323 FNAVGLM------GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSL 376
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC++G + A+ ++DE + NV TY++L++GLC+ G +++A L+ +M+ +GI
Sbjct: 377 IDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGI 436
Query: 265 DADTVTFNILISGLRKQGK-VEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D T NIL+ GL +GK ++ L + + KG +PN +Y ++YG + EA
Sbjct: 437 QPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAY 496
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L +M SP+ +++K +I L + + + +L +M+ +G + R
Sbjct: 497 ALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLLKR 545
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + FN +L+ K Y + + ++ D LNIL+ C G + AF V
Sbjct: 61 PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K +P+ T +TL+ GLC KG V++A +++ ++G D V++ LI+G+ K
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ ++LL R+ G+ PN Y ++ L +K EA L M + +S + V+
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVT 240
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y +IHG C + + L +MV + P + ++ +V
Sbjct: 241 YSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLV 280
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 138/324 (42%), Gaps = 35/324 (10%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P + I++ A+ K + + + +R++++ + D F N++ G+I+
Sbjct: 59 HTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAI--QPDFFTLNILINCFCHLGQINL 116
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNI 203
A L + + P T ++ L L G+++ KL G +D
Sbjct: 117 AFSVLSKILKWGYQPDTVTLTTLIKGLC---LKGQVKKALHFHDKLLAQGFRLDQVSYGT 173
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G+C+ G AA +L + EPNV Y+T++ LC++ V EA L M +G
Sbjct: 174 LINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKG 233
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I A+ VT++ +I G GK+ E + L M K P+ Y ++ L + + EAK
Sbjct: 234 ISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAK 293
Query: 324 ELVGRMICERMSPSFVSYKKLIHG---------------------------LCNQKLVED 356
++ ++ + P+ ++Y LI G LC K VE+
Sbjct: 294 NVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEE 353
Query: 357 VDWVLKKMVQQGFVPRMGMWREIV 380
+ K+M Q+ VP + ++
Sbjct: 354 ALNLYKEMHQKNMVPNTVTYNSLI 377
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 17/196 (8%)
Query: 78 LNQYSK--RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
LN Y + +K+ PN Y +I+ L ++ R D++ + G NVI
Sbjct: 355 LNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMH-------DRGHHANVIT 407
Query: 136 IYGNMA------GRISKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTS 188
Y ++ G++ KAI + M P + T N++L+ LL K QG++
Sbjct: 408 -YNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQD 466
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G + NI++ G C+ G L+ A+ + + C PN T+ ++ L EKG
Sbjct: 467 LLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGE 526
Query: 249 VEEAFGLLERMESEGI 264
++A LL M + G+
Sbjct: 527 TDKAEKLLCEMIARGL 542
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 73/171 (42%)
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
N++ A + P + ++ ++ + + L R+E + I D T N
Sbjct: 43 NVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLN 102
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
ILI+ G++ +L ++ G P++ + ++ GL K + +A +++ +
Sbjct: 103 ILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQ 162
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
VSY LI+G+C +L+++ + P + M+ I+ C+
Sbjct: 163 GFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCL 213
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 2/277 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
YT I+N LA+ K+ +M++I C + + ++ M GR+ +AI+ L
Sbjct: 262 YTAIVNWLAKNKKIQEAVALMEKITANG-CTPTIATYNALLNGLCKM-GRLEEAIDLLRK 319
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+ C P V T+ +++ L K E ++ A G+ +D C L++GL + G
Sbjct: 320 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGK 379
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A V C P+V T ST++ GL + G + A + + ME+ G+ + V ++
Sbjct: 380 IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSA 439
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI GL K K++ +++L +MK C P++ +Y ++ GL A+ M+
Sbjct: 440 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 499
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
P +Y LI GLC + VL M FV
Sbjct: 500 CKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV 536
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 137/304 (45%), Gaps = 5/304 (1%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
R+P +V+ + + P+ + L+++ L ++ + A D + ++ + S
Sbjct: 168 REPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVR--RSMPVSAA 225
Query: 129 FFYNVIKIYGNM-AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F I I G + AG + +A + + C + T+ ++N L K E +
Sbjct: 226 TFS--ILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALME 283
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
G N LL GLC+ G LE A +L + C P+V TY++L+ GL ++
Sbjct: 284 KITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK 343
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
EA+ L + M S G+ DTV + LI GL + GK+ + + + M GC P+ +
Sbjct: 344 RSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLS 403
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ GL R A + M ++P+ V Y LIHGLC + ++ +L +M +
Sbjct: 404 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 463
Query: 368 GFVP 371
P
Sbjct: 464 FCTP 467
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 7/226 (3%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGRI A+ M + P+ ++ +++ L A+ + K D
Sbjct: 412 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 471
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ GLC++G++EAA DE + C+P+V TY+ L+ GLC+ GN + A G+L+ M
Sbjct: 472 YNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMS 531
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S ++ L+ GL K GK+E G L M+ G NS + +++ L R
Sbjct: 532 SS-----RFVYSSLVDGLCKSGKLEGGCMLFHEMERSG-VANSQTRTRLIFHLCKANRVD 585
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
EA L + E M P +Y +I L V + V ++M +
Sbjct: 586 EAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEMTR 630
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 136/293 (46%), Gaps = 12/293 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR-ISKA 147
P+ + +I+ L++A R A I + ++ L + Y+ + I+G R + A
Sbjct: 397 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA--PNEVVYSAL-IHGLCKARKMDCA 453
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E L M C P T+N++++ L + + + + G + D NIL+ G
Sbjct: 454 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 513
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ GN +AA VLD+ YS+L+ GLC+ G +E L ME G+ A+
Sbjct: 514 LCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGLCKSGKLEGGCMLFHEMERSGV-AN 567
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+ T LI L K +V+E + L ++ +G P+ +Y ++ L+ + E + +
Sbjct: 568 SQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQ 626
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M P V+Y L++G+ ++ + +M +G+VP + + ++
Sbjct: 627 EMT-RWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKLA 678
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 128/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L + M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ + G + A V D K P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
N++E F L M++ G+ D T+++LI+GL K+ K+++ +L + M G PN ++
Sbjct: 186 NLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ + +M +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K G+ N L+ G + GNL+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + P+ +Y ++YGL K +A++L M + + P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKE 340
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 132/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQS-VFDAITKWGLRPSVVSFNTLMNGY----IKL-----GNLDEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L + M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G+ P
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYAP 414
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A + DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + +PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVVT 418
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV--PNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ GLC++G +A +L M S G+ +
Sbjct: 321 SCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
T+ ++I+ K+G V G KLL+ M+ G P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPS 415
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 126/251 (50%), Gaps = 1/251 (0%)
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+LC + + +I++Y G I ++E M Y PSV T N +L +V +
Sbjct: 157 RLCNSNPSVYDILIRVYLR-EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV 215
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ K + D NIL+ LC G+ E + Y++ + K P + TY+T++
Sbjct: 216 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 275
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
H C+KG + A LL+ M+S+G+DAD T+N+LI L + ++ +G LL M+ + +
Sbjct: 276 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 335
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
PN +Y ++ G ++ + A +L+ M+ +SP+ V++ LI G ++ ++ +
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395
Query: 361 LKKMVQQGFVP 371
M +G P
Sbjct: 396 FYMMEAKGLTP 406
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 134/311 (43%), Gaps = 38/311 (12%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
+ +SV S L + KRK P+ A + ++IN L F+ +MQ K+EK
Sbjct: 213 EDVSVWSFLKEMLKRK-ICPDVATFNILINVLCAEGSFEKSSYLMQ--KMEKSGYAPTIV 269
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN + + GR AIE L M S
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSK-------------------------------- 297
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
GV+ D C N+L+ LC + + + +L + K+ PN TY+TL++G +G V
Sbjct: 298 ---GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
A LL M S G+ + VTFN LI G +G +E +K+ M+ KG P+ SY +
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 414
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L GL F A+ RM + ++Y +I GLC +++ +L +M + G
Sbjct: 415 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 474
Query: 370 VPRMGMWREIV 380
P + + ++
Sbjct: 475 DPDIVTYSALI 485
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 135/300 (45%), Gaps = 15/300 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM--AGRIS 145
N N ++Y ++I R I+D ++ ++ L F+ Y I G++ +G
Sbjct: 160 NSNPSVYDILIRVYL---REGMIQDSLEIFRLMGLYGFNPSV-YTCNAILGSVVKSGEDV 215
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
L +M P V TFN+++N+L + + + + K G N +L
Sbjct: 216 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 275
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
C+ G +AA +LD + + +V TY+ L+H LC + + + LL M I
Sbjct: 276 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 335
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ VT+N LI+G +GKV +LL M G PN ++ ++ G + + F EA ++
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
M + ++PS VSY L+ GLC + + +GF RM VG +T+
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFD---------LARGFYMRMKRNGVCVGRITY 446
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 16/300 (5%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
S L Q ++ Y P Y +++ + RF A +++ +K + + +D YN++
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV--DADVCTYNMLI 310
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQGIYTS 188
+ RI+K L DM P+ T+N ++N +L++++L E+
Sbjct: 311 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM------ 364
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+ + N L+ G GN + A + + P+ +Y L+ GLC+
Sbjct: 365 -LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 423
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ A G RM+ G+ +T+ +I GL K G ++E + LL M G P+ +Y
Sbjct: 424 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 483
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G RF AKE+V R+ +SP+ + Y LI+ C +++ + + M+ +G
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 146/363 (40%), Gaps = 58/363 (15%)
Query: 42 DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL 101
D+D Y + D + K + LRD +++ +PNE Y +IN
Sbjct: 300 DADVCTYNMLIHDLCRSNRIAKGYLLLRD-----------MRKRMIHPNEVTYNTLINGF 348
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK-----AIETLFDMPS 156
+ + ++ + S G N + + G IS+ A++ + M +
Sbjct: 349 SNEGKVLIASQLLNEM-------LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
PS ++ ++L+ L + +G Y + GV + ++ GLC+NG L+
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN---------------------------- 248
A +L+E K +P++ TYS L++G C+ G
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 249 -------VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
++EA + E M EG D TFN+L++ L K GKV E + + M G P
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N+ S+ ++ G + +A + M P+F +Y L+ GLC + + + L
Sbjct: 582 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641
Query: 362 KKM 364
K +
Sbjct: 642 KSL 644
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 134/294 (45%), Gaps = 2/294 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L + K K + + Y ++I+ L ++ R A ++ R +++ ++ + +I +
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRI-AKGYLLLRDMRKRMIHPNEVTYNTLINGF 348
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
N G++ A + L +M S+ P+ TFN +++ +S + E ++ G+
Sbjct: 349 SN-EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 407
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+LL GLC+N + A + TY+ ++ GLC+ G ++EA LL
Sbjct: 408 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 467
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M +GID D VT++ LI+G K G+ + +++ R+ G PN Y ++Y
Sbjct: 468 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 527
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA + MI E + ++ L+ LC V + + ++ M G +P
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 127/317 (40%), Gaps = 50/317 (15%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI------YGNMAGRISKA 147
+ +++ L +A + E+ M+ C SDG N + YGN +G KA
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMR-------CMTSDGILPNTVSFDCLINGYGN-SGEGLKA 602
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M P+ T+ +L L E + S + +D N LL
Sbjct: 603 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 662
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV---------EEAFG---- 254
+C++GNL A + E +++ P+ TY++L+ GLC KG EA G
Sbjct: 663 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 722
Query: 255 -----------------------LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
E+M++ G D VT N +I G + GK+E+ LL
Sbjct: 723 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 782
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
M + PN +Y +L+G +K + L +I + P ++ L+ G+C
Sbjct: 783 PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 842
Query: 352 KLVEDVDWVLKKMVQQG 368
++E +LK + +G
Sbjct: 843 NMLEIGLKILKAFICRG 859
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 14/280 (5%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ +LN+ SK +P+ Y+ +IN + RF ++I+ RI L +G Y+ +
Sbjct: 463 VVLLNEMSK-DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS--PNGIIYSTL 519
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G + +AI M TFN+++ L A E + G+
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ + L+ G +G AF V DE K P TY +L+ GLC+ G++ EA
Sbjct: 580 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 639
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L+ + + DTV +N L++ + K G + + + L M + P+S +Y ++ GL
Sbjct: 640 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 699
Query: 315 DKKR------FPEAKELVGRMICERMSPSFVSYKKLIHGL 348
K + F + E G ++ P+ V Y + G+
Sbjct: 700 RKGKTVIAILFAKEAEARGNVL-----PNKVMYTCFVDGM 734
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 123/287 (42%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+E Y ++++ L + FD R+K +C + + + N G +
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN--GFL 459
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ L +M P + T++ ++N + + I ++G+ + + L
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ C G L+ A + + + + T++ L+ LC+ G V EA + M S+GI
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+TV+F+ LI+G G+ + + + M G +P +Y +L GL EA++
Sbjct: 580 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 639
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + + V Y L+ +C + + +MVQ+ +P
Sbjct: 640 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 686
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 142/321 (44%), Gaps = 53/321 (16%)
Query: 77 VLNQYSKRKDYNPNEALY-TLIINKLAQAKR------FDAIEDIMQRIKVEKLCRF---- 125
+L+ YSKRKD + + LY ++I+N + K E M I ++ L F
Sbjct: 800 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 859
Query: 126 --SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
D + +N++ G I+ A + + M S T + ++++L + E +
Sbjct: 860 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 919
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN-CEPNVR-------- 234
+ +K G+ ++ L+ GLC G+++ AF V +E C PNV
Sbjct: 920 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 979
Query: 235 --------------------------TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+++TLMH C+ GNV EA L M + G+ D
Sbjct: 980 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 1039
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR-FPEA----K 323
V++N+LI+GL +G + +L E MKG G N+ +Y+ ++ GLL ++ F A K
Sbjct: 1040 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1099
Query: 324 ELVGRMICERMSPSFVSYKKL 344
+L+ R MS S S++ L
Sbjct: 1100 DLLARGFITSMSLSQDSHRNL 1120
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 154/385 (40%), Gaps = 76/385 (19%)
Query: 69 RDPISVISVL--NQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
R +VI++L + R + PN+ +YT ++ + +A ++ A I R +++ L
Sbjct: 700 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA--GIYFREQMDNLGHTP 757
Query: 127 DGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL----------------- 168
D N +I Y M G+I K + L +M + N P++ T+N+
Sbjct: 758 DIVTTNAMIDGYSRM-GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 816
Query: 169 ----VLNLLVSAKL--YGEIQGIYTS-----AAKL-------GVEIDACCLNILLKGLCE 210
+LN ++ KL + + GI S K+ GVE+D N+L+ C
Sbjct: 817 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 876
Query: 211 NGNLEAAF-----------------------------------YVLDEFPKQNCEPNVRT 235
NG + AF VL E KQ P R
Sbjct: 877 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 936
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y L++GLC G+++ AF + E M + I V + ++ L K GK +E LL M
Sbjct: 937 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 996
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
P AS+ +++ EA EL M + VSY LI GLC + +
Sbjct: 997 KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1056
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++M GF+ ++ ++
Sbjct: 1057 LAFELYEEMKGDGFLANATTYKALI 1081
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/298 (17%), Positives = 114/298 (38%), Gaps = 7/298 (2%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
+ N + + SV ++ +K ++P Y ++ L + E ++ +
Sbjct: 593 YGNSGEGLKAFSVFDEMTK-VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA- 650
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF-NLVLNLLVSAKLYGEIQ 183
D YN + +G ++KA+ +M + P T+ +L+ L K I
Sbjct: 651 -VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 709
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ A+ V + + G+ + G +A Y ++ P++ T + ++ G
Sbjct: 710 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 769
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
G +E+ LL M ++ + T+NIL+ G K+ V L + G P+
Sbjct: 770 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 829
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ ++ G+ + +++ IC + ++ LI C +++W
Sbjct: 830 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG---EINWAF 884
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 145/317 (45%), Gaps = 23/317 (7%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI-------KVEKLCRFS 126
V SV+N+ +R PN YT I++ +A+ I+ R+ V
Sbjct: 188 VFSVVNEMVQRG-LQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 246
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG-- 184
GFF + G++ A+ M PS ++N+++ L G+++G
Sbjct: 247 KGFFED---------GKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCC---IGDLKGAL 294
Query: 185 -IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ S + + +A + L+ G G+L+ A + +E C+PNV Y+ ++ L
Sbjct: 295 DFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVL 354
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C+K ++A L+++M + +TVTFN LI L G+V + + M+ GC+PN
Sbjct: 355 CKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPND 414
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y E+L+GL + +A +V M+ S V+Y +I+ LC + + +L +
Sbjct: 415 RTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGR 474
Query: 364 MVQQGFVPRMGMWREIV 380
M+ QG P + I+
Sbjct: 475 MMVQGIQPDAFTFNAII 491
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 127/280 (45%), Gaps = 33/280 (11%)
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCW 160
L A D ++ +Q +++ + D I + AG +A++T + C
Sbjct: 8 LPAAGDVDGVQYALQEMRLRGVACTEDALVA-AIGAFAR-AGSADRALKTFYRASDLGCR 65
Query: 161 -PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V+ +N +L+ L+ + G + +Y + K GV+ + N+L++ LC+N ++AA
Sbjct: 66 DPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARK 125
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA--------------------------- 252
+LDE ++ C P+ ++ T++ G+C+ G VEEA
Sbjct: 126 MLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRM 185
Query: 253 ---FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
F ++ M G+ + VT+ ++ K ++ +L RM GC PN ++ +
Sbjct: 186 WEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTAL 245
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+ G + + +A + M+ E +PS +SY LI GLC
Sbjct: 246 VKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLC 285
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 132/294 (44%), Gaps = 2/294 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ Y ++I L D +K L + Y+ + + AG +
Sbjct: 270 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNAL--LPNATTYSTLVDGFSNAGDLDG 327
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ +M S C P+V + ++++L ++ + + + + N L+
Sbjct: 328 AMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIG 387
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G + A V + C PN RTY+ L+HGL +GN ++AF ++ M + G +
Sbjct: 388 RLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFEL 447
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
VT+N +I+ L + + M LL RM +G P++ ++ +++ + + A L+
Sbjct: 448 SLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLL 507
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
G+M + V+Y LI LCNQ + + L KM+ +G P W +V
Sbjct: 508 GQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 561
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 136/327 (41%), Gaps = 15/327 (4%)
Query: 62 LKIFSNLRDPI-------SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
++++++L D + +V+ V + ++ +PN Y L+I L Q R DA ++
Sbjct: 69 VRVYNHLLDALLRENMVGAVVPVYDNM-RKAGVDPNVYTYNLLIRALCQNDRVDAARKML 127
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ K C D + I GR+ +A L + P ++N V++ L
Sbjct: 128 DEMS-RKGCH-PDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALC 180
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E+ + + G++ + ++ C+ L A +L C PNV
Sbjct: 181 GEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVL 240
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T++ L+ G E G V +A + M EG T+++N+LI GL G ++ + M
Sbjct: 241 TFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM 300
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
K PN+ +Y ++ G + A + M P+ V Y +I LC + +
Sbjct: 301 KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMF 360
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ + ++ KM+ P + ++G
Sbjct: 361 DQAESLIDKMLMDNCPPNTVTFNTLIG 387
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 122/252 (48%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+F+N++ G I A + + PSV +FN ++N + E + +
Sbjct: 137 YFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSV 196
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
GV D ++L+ GLC+ ++ A + DE PN T++TL+ G C+ G
Sbjct: 197 MQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGR 256
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V+ A + +M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 257 VDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 316
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + A E RMI E + V+Y LI GLC + D + +L++M+ G
Sbjct: 317 LIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 369 FVPRMGMWREIV 380
P +G + I+
Sbjct: 377 LKPEIGTYTMII 388
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C V+ L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VIEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ C+ G + A V D K P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M++ G+ D T+++LI+GL K+ K+++ +L + M G PN ++
Sbjct: 186 DLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + + P ++Y LI+GLC + ++ ++ +M +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 134/272 (49%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FD+I R V +G+ IKI G + + M +
Sbjct: 153 RLAQSV-FDSITKWGLRPSVVSFNTLMNGY----IKI-----GDLDEGFRLKSVMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 HPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G+VP
Sbjct: 383 TYTMIINEXCKKGDVWTGSKLLKEMQRXGYVP 414
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ GEI Q ++ S K G+ N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHXFCKE---GEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ P+V TYS L++GLC++ +++A L + M G+ + VTF LI G
Sbjct: 192 RLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ +M + P+ +Y ++YGL K +A +L+ M + + P
Sbjct: 252 CKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGXCKEGDLETAFEYRKRMIKE 340
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 10/186 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
PN +T +I+ + R D +I +++ + L D YN + IYG G + +A
Sbjct: 239 PNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSL--LPDLITYNTL-IYGLCKKGDLKQA 295
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNIL 204
+ + +M P T+ +++ G+++ + ++ + D L
Sbjct: 296 HDLIDEMSMKGLKPDKITYTTLIDGXCKE---GDLETAFEYRKRMIKENIRXDDVAYTAL 352
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+ G A +L E +P + TY+ +++ C+KG+V LL+ M+ G
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGY 412
Query: 265 DADTVT 270
+ VT
Sbjct: 413 VPNVVT 418
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 114/228 (50%)
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M C P+V T+N +++ K E G S G+E + N+++ GLC +G
Sbjct: 8 EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG 67
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
L+ VL E ++ P+ TY+TL++G C++GN +A L M G+ + VT+
Sbjct: 68 RLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYT 127
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
LI+ + K G + M+ ++M +G PN +Y ++ G + EA ++ M
Sbjct: 128 SLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRS 187
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
PS V+Y LI+G C +E+ +L+ MV +G +P + + I+
Sbjct: 188 GFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTII 235
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 138/287 (48%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN + +IIN L + R +++ +++ + D YN + G
Sbjct: 47 KGLEPNLITFNMIINGLCRDGRLKETSEVL--VEMSRKGYVPDEVTYNTLVNGYCKEGNF 104
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ +M P+V T+ ++N + A + G+ + +
Sbjct: 105 HQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTI 164
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G + G L+ A+ VL+E + P++ TY+ L++G C G +EEA GLL+ M +G+
Sbjct: 165 INGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGV 224
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D V+++ +ISG + +++ ++ M GK P++ +Y ++ GL +++R EA +
Sbjct: 225 LPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACD 284
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ M+ ++ P +Y LI+ C + + + +M+Q+GF+P
Sbjct: 285 MFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLP 331
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 134/283 (47%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I+ + KR D ++ + ++ L + +N+I GR+ +
Sbjct: 16 PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGL--EPNLITFNMIINGLCRDGRLKETS 73
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L +M P T+N ++N + + ++ + G+ + L+ +
Sbjct: 74 EVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSM 133
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ GNL A D+ + PN RTY+T+++G ++G ++EA+ +L M G
Sbjct: 134 CKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSI 193
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N LI+G G++EE + LL+ M GKG P+ SY ++ G + A ++
Sbjct: 194 VTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVE 253
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
MI + + P V+Y LI GLC Q+ + + + ++M+ P
Sbjct: 254 MIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPP 296
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 145/319 (45%), Gaps = 17/319 (5%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL+ R +PN YT +IN + +A + + ++ V LC ++ + +I
Sbjct: 109 VLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCP-NERTYTTIING 167
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ G + +A L +M PS+ T+N ++N E G+ GV
Sbjct: 168 FAQ-QGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLP 226
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D + ++ G N L+ AF + E ++ P+ TYS+L+ GLCE+ + EA +
Sbjct: 227 DVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMF 286
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ M + + D T+ LI+ K+G + + + L + M KG P++ +Y ++ GL +
Sbjct: 287 QEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQ 346
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIH---------------GLCNQKLVEDVDWVL 361
R EA+ L+ ++ + PS V+Y LI G C + L+++ D V
Sbjct: 347 ARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVF 406
Query: 362 KKMVQQGFVPRMGMWREIV 380
+ M+ + P ++ I+
Sbjct: 407 ESMINKNHKPNEAIYNVII 425
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 19/210 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ +I L + +R D+ Q + KL D F Y + G ++KA+
Sbjct: 261 PDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLP--PDEFTYTTLINAYCKEGDLNKAL 318
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY---------TSAAKLGVEIDAC 199
+M P T+N+++N L E + + SA I+ C
Sbjct: 319 HLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENC 378
Query: 200 CLNI-------LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
C NI L+KG C G ++ A V + +N +PN Y+ ++HG C GNV +A
Sbjct: 379 C-NIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKA 437
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQG 282
+ L + M TVT L+ L +G
Sbjct: 438 YKLYKEMVHVDFVPHTVTVLALVKALFTEG 467
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%)
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ ME G + VT+N +I G K + +E L M KG PN ++ ++ GL
Sbjct: 5 FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
R E E++ M + P V+Y L++G C + + +MV+ G P +
Sbjct: 65 RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124
Query: 375 MWREIV 380
+ ++
Sbjct: 125 TYTSLI 130
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 50/94 (53%)
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
G++ + M+ GC PN +Y ++ G KR EA + M + + P+ +++ +I+
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
GLC +++ VL +M ++G+VP + +V
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLV 95
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 145/381 (38%), Gaps = 107/381 (28%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGN-MAGR 143
PNE YT IIN AQ D ++ + GF +++ I G+ + GR
Sbjct: 156 PNERTYTTIINGFAQQGLLDEAYRVLNEMT-------RSGFIPSIVTYNALINGHCVLGR 208
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLN----------------------LLVSAKLYGE 181
+ +AI L DM P V +++ +++ +L A Y
Sbjct: 209 MEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSS 268
Query: 182 -IQGI-----YTSAAKLGVEI-------DACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
IQG+ T A + E+ D L+ C+ G+L A ++ DE ++
Sbjct: 269 LIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKG 328
Query: 229 CEPNVRTYSTLMHGL--------------------------------------------- 243
P+ TY+ L++GL
Sbjct: 329 FLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVA 388
Query: 244 -----CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
C KG ++EA + E M ++ + +N++I G + G V + KL + M
Sbjct: 389 LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVD 448
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMI--CERMSPSFVSYKKLIHGLCNQKLVED 356
P++ + ++ L + E E++G ++ C +++ + +S K L+ NQK +
Sbjct: 449 FVPHTVTVLALVKALFTEGMDGELNEVIGDILRSC-KLTDAELS-KVLVE--INQK-EGN 503
Query: 357 VDWV---LKKMVQQGFVPRMG 374
+D V L +M + G +P G
Sbjct: 504 MDMVFNLLTEMAKDGLIPSTG 524
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 154/344 (44%), Gaps = 22/344 (6%)
Query: 46 HAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYS---------------KRKDYNPN 90
H K D LS ++ F D ++ ++LN + K+ P
Sbjct: 214 HCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPT 273
Query: 91 EALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF-SDGFFYNVIKIYGNMAGRISKAIE 149
Y +++ A R I+ + ++ F D + YNV+ AG++ +A
Sbjct: 274 RPTYNTLVSAYA---RLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFR 330
Query: 150 TLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M P V T+N + + + + + + GV+ NI++KGL
Sbjct: 331 LKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGL 390
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++G LE A L++ P+V TY+TL+H C+ GN+ +A+ L++ M G+ DT
Sbjct: 391 CKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDT 450
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T N ++ L K+ + EE LL+ +G P+ SY V+ + A L
Sbjct: 451 FTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDE 510
Query: 329 MICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQQGFVP 371
MI ++++PS +Y LI GL +L E +D L +++++G VP
Sbjct: 511 MIEKKLTPSISTYNTLIKGLSRMGRLKEAIDK-LNELMEKGLVP 553
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 134/310 (43%), Gaps = 1/310 (0%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
L +S LR P +L+ +R P+ +++ LA++ + +
Sbjct: 137 ALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIV 196
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
L + + +N++ G ++ A+ TL M + P T+N +LN + G
Sbjct: 197 ALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLG 256
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E + + K GV N L+ G ++ A V++ EP++ TY+ L
Sbjct: 257 EARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLA 316
Query: 241 HGLCEKGNVEEAFGLLERMESEG-IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
GLC+ G V+EAF L + ME G + D VT+N L K + ++LLE M+ KG
Sbjct: 317 AGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGV 376
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
++ V+ GL A + +M + ++P ++Y LIH C +
Sbjct: 377 KATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYT 436
Query: 360 VLKKMVQQGF 369
++ +MV++G
Sbjct: 437 LMDEMVRRGL 446
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 122/254 (48%), Gaps = 7/254 (2%)
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+EK S + +IK M GR+ +AI+ L ++ P T+N++++
Sbjct: 512 IEKKLTPSISTYNTLIKGLSRM-GRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKE-- 568
Query: 179 YGEIQGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
G+++ + K+ + D N L+ GLC NG L+ A + + + ++ + +V T
Sbjct: 569 -GDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVIT 627
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y+TL+ +C+ G+V+ A ME+ G+ D T+N+++S L + G+ EE +L ++
Sbjct: 628 YNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLA 687
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
G S S + +D+ + + + + +Y KL++GLC +
Sbjct: 688 ESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFK 747
Query: 356 DVDWVLKKMVQQGF 369
+ +L +M+Q+G
Sbjct: 748 EAKAILDEMMQKGM 761
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 153/345 (44%), Gaps = 27/345 (7%)
Query: 53 KDWLSPTEVLKIFSNLRDPISVISVLNQYSK------RKDYNPNEALYTLIINKLAQAKR 106
KD ++PT ++ L + + + Q +K + P+ Y ++ L QA +
Sbjct: 267 KDGVAPTR--PTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGK 324
Query: 107 FDA---IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSV 163
D ++D M+R+ D YN + S A+ L +M ++
Sbjct: 325 VDEAFRLKDEMERLGT----LLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATL 380
Query: 164 KTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYV 220
T N+V+ L GE++G K+ G+ D N L+ C+ GN+ A+ +
Sbjct: 381 VTHNIVIKGLCKD---GELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTL 437
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+DE ++ + + T +T+++ LC++ EEA GLL+ G D V++ +++ K
Sbjct: 438 MDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFK 497
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+ E ++L + M K P+ ++Y ++ GL R EA + + ++ + + P +
Sbjct: 498 EYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTT 557
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
Y +IH C + +E+ KMV+ F P ++V C T
Sbjct: 558 YNIIIHAYCKEGDLENAFQFHNKMVENSFKP------DVVTCNTL 596
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 1/221 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ TFNL+++ S + ++ G+ DA N LL C G L A +
Sbjct: 202 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L K P TY+TL+ G +++A ++E M + G + D T+N+L +GL +
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ 321
Query: 281 QGKVEEGMKLLERMKGKGC-YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
GKV+E +L + M+ G P+ +Y + + +A L+ M + + + V
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLV 381
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ +I GLC +E L KM G P + + ++
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLI 422
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 102/245 (41%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN + AG I+KA + +M T N VL L K Y E QG+
Sbjct: 414 DVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLL 473
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S + G D ++ + N E A + DE ++ P++ TY+TL+ GL
Sbjct: 474 QSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRM 533
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G ++EA L + +G+ D T+NI+I K+G +E + +M P+ +
Sbjct: 534 GRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTC 593
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL + +A +L + + ++Y LI +C V+ M
Sbjct: 594 NTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEA 653
Query: 367 QGFVP 371
+G P
Sbjct: 654 RGLQP 658
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 7/216 (3%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT---SAAKLGVEIDA 198
G + A+ L M P V T+N +++ A G I YT + G+++D
Sbjct: 394 GELEGALGCLNKMADDGLAPDVITYNTLIHAHCKA---GNIAKAYTLMDEMVRRGLKLDT 450
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
LN +L LC+ E A +L P++ P+ +Y T+M ++ N E A L +
Sbjct: 451 FTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDE 510
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M + + T+N LI GL + G+++E + L + KG P+ +Y +++ +
Sbjct: 511 MIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGD 570
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLC-NQKL 353
A + +M+ P V+ L++GLC N KL
Sbjct: 571 LENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKL 606
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 116/270 (42%), Gaps = 39/270 (14%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+ + Y +I L++ R D + + + L D YN+I G +
Sbjct: 514 KKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGL--VPDDTTYNIIIHAYCKEGDL 571
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
A + M + P V T N ++N L ++ KL ++ ++ S + G ++D N
Sbjct: 572 ENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALK-LFESWVEKGKKVDVITYNT 630
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++ +C++G+++ A + + + +P+ TY+ ++ L E G EEA +L ++ G
Sbjct: 631 LIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESG 690
Query: 264 I-----------------------------------DADTVTFNILISGLRKQGKVEEGM 288
D+ + + L++GL G+ +E
Sbjct: 691 TLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAK 750
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
+L+ M KG +S++Y ++ GL+ +++
Sbjct: 751 AILDEMMQKGMSVDSSTYITLMEGLVKRQK 780
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P +YT++I L R E + + ++ + + + YN + + KA+
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGM--LPNLYTYNTMMDGYCKIAHVKKAL 283
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E +M P+V TF ++++ L + A GV + N L+ G
Sbjct: 284 ELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ GNL A + E K P+V TYS L+ GLC +EEA GLL+ M+ +G +
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N LI G K+G +E+ +++ +M KG PN ++ ++ G + A L
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + + P V+Y LI G ++ + K+M + G P
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 129/299 (43%), Gaps = 21/299 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + ++I+ L + + + I + + F YN + AG +S+A+
Sbjct: 296 PNVVTFGILIDGLCKTDEMVSARKFL--IDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
++ + P V T+++++ L E G+ K G +A N L+ G
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ GN+E A V + ++ EPN+ T+STL+ G C+ G +E A GL M +G+ D
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL--- 325
V + LI G K G +E +L + M+ G +PN + ++ GL R +A +L
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533
Query: 326 -------------VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ R +C SP+ V Y LI GLC + M G P
Sbjct: 534 KTGTDTTGSKTNELDRSLC---SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 150/358 (41%), Gaps = 59/358 (16%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM-------QRIKVEK 121
R + + + S+R D N LY+ II+ L AK + +M Q+ + +
Sbjct: 48 RTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSR 107
Query: 122 LC-------------RFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL 168
+C +F+ F +I + M G + +A+ + M + P+++ N+
Sbjct: 108 ICCSVFNVLSRLESSKFTPNVFGVLIIAFSEM-GLVEEALWVYYKM---DVLPAMQACNM 163
Query: 169 VLNLLVSA-------KLYGEI--QGIYTSAAKLGVEIDACC------------------- 200
VL+ LV K+YG++ +G + G ID CC
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223
Query: 201 -------LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
IL++GLC + A + PN+ TY+T+M G C+ +V++A
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L M +G+ + VTF ILI GL K ++ K L M G PN Y ++ G
Sbjct: 284 ELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA L + + P +Y LI GLC +E+ D +L++M ++GF+P
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 113/238 (47%), Gaps = 7/238 (2%)
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIET------LFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
DG NV+ +G + + K E L DM S+ P++ +N +++ A
Sbjct: 290 LGDGLLPNVVT-FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
E +++ K + D +IL+KGLC +E A +L E K+ PN TY+T
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+ G C++GN+E+A + +M +GI+ + +TF+ LI G K GK+E M L M KG
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
P+ +Y ++ G EA L M + P+ + LI GLC + D
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 111/295 (37%), Gaps = 54/295 (18%)
Query: 66 SNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF 125
NL + +S+ S + ++ + P+ Y+++I L R + + ++Q +K +
Sbjct: 347 GNLSEALSLHSEIEKH----EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF--L 400
Query: 126 SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
+ YN + G + KAIE M P++ TF+ +++ A G+
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460
Query: 186 YTSAA-----------------------------------KLGVEIDACCLNILLKGLCE 210
YT + G+ + L+ L+ GLC+
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520
Query: 211 NGNLEAAFYVL-------------DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+G + A + +E + C PN Y+ L+ GLC G + +A
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
M G+ D T ++I G + + + M L + G PNS+ Y+ + G
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKG 635
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 91/163 (55%)
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC GN++ A V +NC + TYSTLMHGLC +G ++EA LL+ M+ EG
Sbjct: 9 ALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFP 68
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ V FN+LIS L K+G + KL++ M KGC PN +Y +++GL K + +A L+
Sbjct: 69 NPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLL 128
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
RM+ + P+ +++ L+ G D VL + ++G+
Sbjct: 129 NRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGY 171
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + +A+E M NC T++ +++ L + E + G +
Sbjct: 13 VGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVA 72
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ LC+ G+L A ++D + C PN TY++L+HGLC KG +++A LL RM
Sbjct: 73 FNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMV 132
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ + +TF L+ G K G+ +G+++L ++ KG N SY ++ GL + +
Sbjct: 133 ANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGE 192
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L M+ + P+ + Y LI GLC + ++ L +M +G P
Sbjct: 193 HGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTP 243
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 14/229 (6%)
Query: 126 SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
+DG+ Y+ + GRI +A+ L +M +P+ FN++++ L +G
Sbjct: 33 ADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCK-------KGD 85
Query: 186 YTSAAKL-------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ A+KL G + N L+ GLC G L+ A +L+ C PN T+ T
Sbjct: 86 LSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGT 145
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+ G + G + +L +E +G + +++ LISGL K+GK E GM+L + M KG
Sbjct: 146 LVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG 205
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
C PN+ Y ++ GL + + EAKE + M + +P+ +Y L+ G
Sbjct: 206 CKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWG 254
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 139/308 (45%), Gaps = 12/308 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PNE Y +++ L + D ++ R+ K C +D F ++ + GR +
Sbjct: 103 PNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANK-CVPNDITFGTLVDGFVK-HGRALDGV 160
Query: 149 ETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L + + +++ L+ L K +Q ++ + G + + + L+ G
Sbjct: 161 RVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQ-LWKEMVEKGCKPNTIVYSALIDG 219
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC G + A L E + PN TYS+LM G E G++ +A + + M +
Sbjct: 220 LCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHH 279
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V ++ILI+GL K GK++E + + ++M +G + +Y +++G + + + +L
Sbjct: 280 EVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFN 339
Query: 328 RMICE--RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
+M+C ++ P V+Y L++ C + V +L M+ QG P + + C F
Sbjct: 340 QMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDP------DFITCDIF 393
Query: 386 GKDNRNRV 393
K R+ +
Sbjct: 394 LKTLRDNM 401
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%)
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
LC GNV++A + M AD T++ L+ GL +G+++E + LL+ M+ +G +P
Sbjct: 9 ALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFP 68
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N ++ ++ L K A +LV M + P+ V+Y L+HGLC + ++ +L
Sbjct: 69 NPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLL 128
Query: 362 KKMVQQGFVP 371
+MV VP
Sbjct: 129 NRMVANKCVP 138
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--VEKLCRFSDGFFYNVIKIYGNM 140
+ K Y NE Y+ +I+ L + + E MQ K VEK C+ + Y+ +
Sbjct: 167 EEKGYRGNEFSYSSLISGLFKEGKG---EHGMQLWKEMVEKGCK-PNTIVYSALIDGLCR 222
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G+ +A E L +M + P+ T++ L+ + ++ I ++
Sbjct: 223 EGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAIL-VWKEMTDNDCNHHEV 281
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
C +IL+ GLC+NG L+ A V + + + +V YS+++HG C VE+ L +M
Sbjct: 282 CYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQM 341
Query: 260 --ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+ + D VT+NIL++ + V + +L M +GC P+ + L L D
Sbjct: 342 LCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNM 401
Query: 318 RFPE-----AKELVGRMI 330
P+ ELV R+I
Sbjct: 402 DPPQDGREFLDELVVRLI 419
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
++ L + G V++ +++ M + C + +Y +++GL ++ R EA L+ M E
Sbjct: 6 IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P+ V++ LI LC + + ++ M +G VP + +V
Sbjct: 66 TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLV 112
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 115/231 (49%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 79 SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 138
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V + K P+V +++TLM+G G+++E F L M
Sbjct: 139 FNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMH 198
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKP 309
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 120/243 (49%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+F+N++ G I A + + PSV +FN ++N + E + T+
Sbjct: 137 YFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTA 196
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V+ A + ++M S+ + D +T+N LI GL ++G +++ L++ M KG P+ +Y
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTT 316
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + A E RMI E + V Y LI GLC + D + VL++M+ G
Sbjct: 317 LIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVG 376
Query: 369 FVP 371
P
Sbjct: 377 LKP 379
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 113/218 (51%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P V T+++++N L + ++ G+ + L+ G C+NG
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + + Q+ P++ TY+TL++GLC KG++++A L++ M +G+ D +T+
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTT 316
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+G +E + +RM + + Y ++ GL + R+ +A++++ M+
Sbjct: 317 LIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVG 376
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P ++Y +I+ C + V +LK+M + G +P
Sbjct: 377 LKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMP 414
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P++
Sbjct: 323 KEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTI 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%)
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
++ LMH C+ G++ A + + G+ V+FN L++G + G ++EG +L M
Sbjct: 139 FNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMH 198
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
G P+ +Y ++ GL + + +A EL M+ + + P+ V++ LI G C V+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
+ K+M+ Q P + + ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLI 283
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 116/231 (50%), Gaps = 1/231 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGRI +A+ M C+P+V T+ ++ L ++ + G+ + + D
Sbjct: 271 AGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVH-KAMGLLDEMLERNLVPDLIT 329
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C G+L++A+ +L ++ P+ RTY + LC+ VEEA L + +
Sbjct: 330 YNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLT 389
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
EG+ A+ + +++LI G K GKV+E L E+M K C PN+ ++ +++GL
Sbjct: 390 EEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLK 449
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA L +M+ + P+ ++ LI + Q +D L+KM+ G P
Sbjct: 450 EALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKP 500
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 144/350 (41%), Gaps = 37/350 (10%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D+ + T + + +D S V + R NE Y +I+ L +A R D +
Sbjct: 226 DYFTSTSFILGYCRSKDVDSAFRVFEEMPNR-----NEVSYNQLIHGLCEAGRIDEAVSL 280
Query: 114 MQRIK--------------VEKLCR------------------FSDGFFYNVIKIYGNMA 141
R+K ++ LCR D YN + A
Sbjct: 281 FVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRA 340
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A L M P +T+ ++ L + E + ++ S + GV +
Sbjct: 341 GHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMY 400
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++L+ G C+ G ++ A + ++ +NC PN T++ L+HGLC GN++EA L ++M
Sbjct: 401 SVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVK 460
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ TFNILI + KQG ++ K L++M G P + +Y + + E
Sbjct: 461 MGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQE 520
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A++++ +M E + P +Y LI L VLK M P
Sbjct: 521 AEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEP 570
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 172/436 (39%), Gaps = 72/436 (16%)
Query: 16 IQSLSSASTITRKRTFA-----LASPSASHQDSDHHAYKL----NHKDW----------- 55
+ S + A + R+ F+ L +P + D H + L + +W
Sbjct: 5 VTSSTRAGYLLRRIPFSSTSTLLHTPPEAESDPSHLPHHLLSILSKPNWQNNPSLKSLLP 64
Query: 56 -LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIEDI 113
++P+ V +FS DP + + S+ ++ N Y ++ + K D + I
Sbjct: 65 AITPSHVSSLFSLNLDPHTALQFSYWISQTPNFKHNVDSYASLLTLIDHHKIVSDVPKII 124
Query: 114 MQRIK----------VEKLCR--FSDGFFYNVIKIYGNMA------GRISKAIETLFDMP 155
+ IK V +CR D +K Y + G + + + +M
Sbjct: 125 VSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEML 184
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
+ TFNL++N+ E + + G+ D + G C + +++
Sbjct: 185 EEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVD 244
Query: 216 AAFYVLDEFPKQN-------------------------------CEPNVRTYSTLMHGLC 244
+AF V +E P +N C PNV TY+ L+ GLC
Sbjct: 245 SAFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLC 304
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
K NV +A GLL+ M + D +T+N LI+G + G ++ +LL MK +G P+
Sbjct: 305 RK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQR 363
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y + L R EA+ L + E +S + + Y LI G C V++ + +KM
Sbjct: 364 TYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKM 423
Query: 365 VQQGFVPRMGMWREIV 380
+ + P + ++
Sbjct: 424 LSKNCSPNAYTFNALI 439
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 137/332 (41%), Gaps = 37/332 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + P++ Y I+ L ++ R + + + E + ++ Y+V+ G
Sbjct: 354 KERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS--ANVIMYSVLIDGYCKVG 411
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A M S NC P+ TFN +++ L SA E ++ K+G++ N
Sbjct: 412 KVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFN 471
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ + + G+ + A L + +P RTY+ + C G V+EA ++ +M+ E
Sbjct: 472 ILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEE 531
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK----- 317
G+ D T+ LI K G +L+ M C P+ ++ ++ L DK+
Sbjct: 532 GVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEK 591
Query: 318 ------------------------RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
F EL M +P Y+KLI G+C
Sbjct: 592 SGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICK--- 648
Query: 354 VEDVDWVLK---KMVQQGFVPRMGMWREIVGC 382
VE++ LK +M ++G P ++ ++ C
Sbjct: 649 VENLGIALKLLDQMQKEGISPSEMVFNAVISC 680
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 135/330 (40%), Gaps = 41/330 (12%)
Query: 85 KDYNPNEALYTLIINKLAQA---KRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM- 140
K+ +PN + +I+ L A K ++ D M ++ ++ + +N++ G M
Sbjct: 426 KNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTV-----YTFNIL--IGRML 478
Query: 141 -AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G A + L M S P +T+N + + SA E + + + GV D
Sbjct: 479 KQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDF 538
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG----- 254
L+K + G +AF VL +CEP+ T+ +L+ L +K V E G
Sbjct: 539 TYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVE 598
Query: 255 ------------------------LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
L E ME G D+ + LISG+ K + +KL
Sbjct: 599 SVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKL 658
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L++M+ +G P+ + V+ +++ EA +V MIC SP K LI GL
Sbjct: 659 LDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYE 718
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ E + V KK+ G+ W+ ++
Sbjct: 719 EGETERGNSVFKKLRGCGYNDDEIAWKILI 748
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 38/295 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY-NVIKIYGNMAGRISKA 147
P Y I A + ED+M ++K E + D F Y ++IK YG + G A
Sbjct: 500 PVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVP--PDDFTYTSLIKAYGKL-GLTYSA 556
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLV---------------SAKLYGEIQG-------- 184
+ L M +C PS TF ++ L S +G++ G
Sbjct: 557 FDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMME 616
Query: 185 ------IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
++ K G D+ C L+ G+C+ NL A +LD+ K+ P+ ++
Sbjct: 617 FDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNA 676
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++ C+ EA ++E M G LI GL ++G+ E G + ++++G G
Sbjct: 677 VISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCG 736
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+ +++ ++ G+L + E +L E M + ++ + + QKL
Sbjct: 737 YNDDEIAWKILIDGMLKQGLVEEFSQLF-----EEMEKNGCNFSPRTYSILTQKL 786
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 135/318 (42%), Gaps = 2/318 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+ + N + + ++ L AKR D DI+ E C D YN + G+
Sbjct: 118 KTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCP-PDVVAYNTVINGFFREGQ 176
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA +M P+V T+ V++ L A++ +G++ GV+ D N
Sbjct: 177 VEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNC 236
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G G + +L+E EP+ TY+ L+ LC+ G EA + M +G
Sbjct: 237 LIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKG 296
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D + IL+ G +G + E L+ M G G PN + + K EA
Sbjct: 297 IKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAM 356
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GC 382
+ +M + +SP VS+ LI LC V+D +M+ +G P + ++ +V G
Sbjct: 357 HIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGL 416
Query: 383 VTFGKDNRNRVYVTETVD 400
T GK + E +D
Sbjct: 417 CTVGKWEKAEELFFEVLD 434
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ A+ M + P++ F+ ++ L + + + + ++ G+ +DA
Sbjct: 385 GRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFF 444
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ LC G + A ++D + PNV +Y+TL+ G C G ++EA LL+ M S
Sbjct: 445 NTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVS 504
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ + T+ IL+ G K +V++ L M KG P A+Y +L+GL RF E
Sbjct: 505 NGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSE 564
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
A EL MI R +Y +++GLC V++ + +++ +
Sbjct: 565 ANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSK 610
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 145/299 (48%), Gaps = 6/299 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKA 147
PN YT +I+ L +A+ D + + Q++ +++ + +G YN + I+G ++ G+ +
Sbjct: 194 PNVVTYTTVIDGLCKAQVVDRAKGVFQQM-IDRGVKPDNGT-YNCL-IHGYLSTGKWKEV 250
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ L +M ++ P T+ L+L+ L E + + S + G++ D ILL G
Sbjct: 251 VQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHG 310
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
G L LD PN R ++ + +K +EEA + +M +G+ D
Sbjct: 311 YATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPD 370
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V+F LI L K G+V++ + +M +G PN + ++YGL ++ +A+EL
Sbjct: 371 VVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFF 430
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVT 384
++ + + V + L+ LCN+ V + ++ M++ G P + + +V C+T
Sbjct: 431 EVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLT 489
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ + FN++ + E I+ + G+ D L+ LC+ G ++ A
Sbjct: 334 PNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQ 393
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
++ + PN+ +S+L++GLC G E+A L + +GI D V FN L+ L
Sbjct: 394 FNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCN 453
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G+V E +L++ M G PN SY ++ G R EA +L+ M+ + P+ +
Sbjct: 454 EGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFT 513
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y L+ G C + V+D + ++M+ +G P + + I+
Sbjct: 514 YTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTIL 553
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 105/229 (45%), Gaps = 8/229 (3%)
Query: 151 LFDMPSYNCWP-SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI------DACCLNI 203
LFD + P SV+ FN +L ++ A + + + ++ E +AC +I
Sbjct: 36 LFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYSI 95
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG-LLERMESE 262
L+ C G LE F K NV S L+ GLC+ V+EA LL RM
Sbjct: 96 LIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEF 155
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D V +N +I+G ++G+VE+ L M +G PN +Y V+ GL + A
Sbjct: 156 GCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRA 215
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K + +MI + P +Y LIHG + ++V +L++M G P
Sbjct: 216 KGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEP 264
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 134/300 (44%), Gaps = 16/300 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN +++ ++ L +++ E++ + + +C D F+N + GR+ +A
Sbjct: 403 TPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGIC--VDAVFFNTLMCNLCNEGRVMEA 460
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-------GVEIDACC 200
+ M P+V ++N L+ L G I AAKL G++ +
Sbjct: 461 QRLIDLMIRVGVRPNVISYN---TLVAGHCLTGRID----EAAKLLDVMVSNGLKPNEFT 513
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
ILL+G C+ ++ A+ + E + P V TY+T++HGL + G EA L M
Sbjct: 514 YTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMI 573
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ D T+NI+++GL K V+E K+ R+ K +S ++ ++ LL R
Sbjct: 574 NSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKE 633
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A +L + + P V+Y+ + L + + + D + M + G P M +V
Sbjct: 634 DAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALV 693
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 122/277 (44%), Gaps = 7/277 (2%)
Query: 95 TLIINKLAQAKRFDA--IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
TL+ N + + +A + D+M R+ V + YN + + GRI +A + L
Sbjct: 446 TLMCNLCNEGRVMEAQRLIDLMIRVGVR-----PNVISYNTLVAGHCLTGRIDEAAKLLD 500
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M S P+ T+ ++L A+ + ++ GV N +L GL + G
Sbjct: 501 VMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTG 560
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
A + + ++ TY+ +++GLC+ V+EAF + R+ S+ D+VTFN
Sbjct: 561 RFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFN 620
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
I+I L K G+ E+ M L + G P+ +Y+ + L+++ E L M
Sbjct: 621 IMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKS 680
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+P+ L+ L ++ + L K+ ++ F
Sbjct: 681 GTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNF 717
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRI--KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
Y +I+N L + D + +R+ K +L D +N++ GR A++
Sbjct: 584 YNIILNGLCKNNFVDEAFKMFRRLCSKDPQL----DSVTFNIMIGALLKGGRKEDAMDLF 639
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+ +Y P V T+ L+ L+ GE G++++ K G ++ LN L++ L
Sbjct: 640 ATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHR 699
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
G++ A L + ++N T S L+
Sbjct: 700 GDISRAGVYLYKLDEKNFSLEASTTSMLI 728
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 79/193 (40%), Gaps = 4/193 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
K P A Y I++ L Q RF +A E + I C D + YN+I
Sbjct: 540 KGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKC---DIYTYNIILNGLCKNNF 596
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A + + S + TFN+++ L+ + ++ + + G+ D +
Sbjct: 597 VDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRL 656
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+ + L E G+L + K PN + L+ L +G++ A L +++ +
Sbjct: 657 IAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKN 716
Query: 264 IDADTVTFNILIS 276
+ T ++LIS
Sbjct: 717 FSLEASTTSMLIS 729
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 26/311 (8%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLA-QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+L + +RK +PN Y +IN + K F+A E + E L R G N I
Sbjct: 310 LLQEMLERK-ISPNVVTYNALINAFVKEGKFFEAAE-----LYDEMLPR---GIIPNTIT 360
Query: 136 IYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
+ G R+ A + + M + C P V TF +++ AK + +
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ G+ + N L+ G C G+L AA + + P++ T +TL+ GLC+ G ++
Sbjct: 421 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 480
Query: 251 EAFGLLERMESE-----------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+A + + M+ G++ D +T+NILI GL +GK E +L E M +G
Sbjct: 481 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P++ +Y ++ GL + R EA ++ M + SP+ V++ LI+G C V+D
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 600
Query: 360 VLKKMVQQGFV 370
+ +M ++G V
Sbjct: 601 LFCEMGRRGIV 611
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 158/357 (44%), Gaps = 48/357 (13%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
D +S +++L + + PN +Y+ II+ L + R ++ I+++ F +
Sbjct: 232 DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLF--IEMQDKGIFPNIV 289
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN + ++GR S A L +M P+V T+N ++N V + E +Y
Sbjct: 290 TYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEM 349
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAA---FYV-------------------------- 220
G+ + N ++ G C+ L+AA FY+
Sbjct: 350 LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 409
Query: 221 ------LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
L E P++ N TY+TL+HG C G++ A L ++M S G+ D VT N L
Sbjct: 410 DDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 469
Query: 275 ISGLRKQGKVEEGMKLLERMKGK-----------GCYPNSASYQEVLYGLLDKKRFPEAK 323
+ GL GK+++ +++ + M+ G P+ +Y ++ GL+++ +F EA+
Sbjct: 470 LDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAE 529
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL M + P ++Y +I GLC Q +++ + M + F P + + ++
Sbjct: 530 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 5/219 (2%)
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
+ +F +++ S + KLG+ D LL GLC + + A LD
Sbjct: 116 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEA---LD 172
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
F Q C P+V T++TLM+GLC +G V EA LL+RM G+ D +T+ + G+ K G
Sbjct: 173 LF-HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMG 231
Query: 283 KVEEGMKLLERMKG-KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
+ LL +M+ PN Y ++ GL R ++ L M + + P+ V+Y
Sbjct: 232 DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTY 291
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+I G C +L++M+++ P + + ++
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALI 330
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 12/228 (5%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V ++ +++ L + + ++ G+ + N ++ G C +G AA +
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L E ++ PNV TY+ L++ ++G EA L + M GI +T+T+N +I G K
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
Q +++ + M KGC P+ ++ ++ G KR + EL+ M + + V+
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430
Query: 341 YKKLIHGLCNQKLVEDVDWVL---KKMVQQGFVPRMGMWREIVGCVTF 385
Y LIHG C LV D++ L ++M+ G P +IV C T
Sbjct: 431 YNTLIHGFC---LVGDLNAALDLSQQMISSGVCP------DIVTCNTL 469
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 108/241 (44%), Gaps = 9/241 (3%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ AI+ DM PSV FN ++ +V + + +Y + + D I
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+K C L A + K P+V T++TL+HGLC V EA L ++
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D +TF L++GL ++G+V E + LL+RM G P+ +Y + G+ A
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 324 ELVGRMICERMS---PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ +M E +S P+ V Y +I GLC D + +M +G P + + ++
Sbjct: 238 NLLRKM--EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMI 295
Query: 381 G 381
G
Sbjct: 296 G 296
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 137/292 (46%), Gaps = 15/292 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K +P+ +T +I+ AKR D +++ + L ++ YN + I+G + G
Sbjct: 387 KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL--VANTVTYNTL-IHGFCLVGD 443
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL----------- 192
++ A++ M S P + T N +L+ L + ++ + K
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GVE D NIL+ GL G A + +E P + P+ TYS+++ GLC++ ++EA
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ M S+ + VTFN LI+G K G+V++G++L M +G ++ Y ++YG
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A ++ MI + P ++ + ++ G +++ +E +L+ +
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 4/168 (2%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G E LE A + + + P+V ++ LM + + L ++ME +
Sbjct: 52 LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +F ILI K+ + ++ G +P+ ++ +L+GL R EA
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L IC P +++ L++GLC + V + +L +MV+ G P
Sbjct: 172 DLF-HQICR---PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQP 215
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 75/169 (44%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN++ G+ +A E +MP P T++ +++ L E ++
Sbjct: 508 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S + N L+ G C+ G ++ + E ++ + Y TL++G +
Sbjct: 568 VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKV 627
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
GN+ A + + M S G+ DT+T +++G + ++E + +LE ++
Sbjct: 628 GNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 147/307 (47%), Gaps = 9/307 (2%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
RD I ++ + + R PN +Y ++++ L + + + + +C D
Sbjct: 178 RDAIELLRKMEKGGVR----PNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGIC--IDV 231
Query: 129 FFYNVIKIYGNM-AGRISKAIETLFDMP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
F YN + I+G AG+ A+ L +M + P V TFN++++ L + E + ++
Sbjct: 232 FTYNSL-IHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVF 290
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
K G+E D N L+ G C G + A V D ++ PNV +YSTL++G C+
Sbjct: 291 GLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKV 350
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
V+EA LL M + DTVT+N L+ GL K G+V L+E M+ G P+ +Y
Sbjct: 351 KMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITY 410
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+L L ++ +A L ++ +SP+ +Y LI GLC ++ + + +
Sbjct: 411 NVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSV 470
Query: 367 QGFVPRM 373
+G P +
Sbjct: 471 KGCRPNI 477
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV-EIDACCLNILL 205
A+ T M + PS+ + N +L+ ++ K Y + + + G + L+I +
Sbjct: 39 AVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFI 98
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
L G + AF V+ + K+ + T +TLM GLC KG EA L + S+G
Sbjct: 99 NSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFS 158
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D V + LI+GL K GK + ++LL +M+ G PN Y V+ GL + EA L
Sbjct: 159 FDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGL 218
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
M+ + + +Y LIHG C + +L +MV +
Sbjct: 219 CSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMK 260
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 139/305 (45%), Gaps = 5/305 (1%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQ-AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
L ++ K ++ +E Y +IN L + K DAIE + K+EK + YN++
Sbjct: 148 LYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLR---KMEKGGVRPNLIMYNMVVD 204
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
G +++A +M V T+N L+ + + G ++ + K V
Sbjct: 205 GLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVR 264
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D NIL+ LC+ G + A V K+ EP+V + + LM+G C +G + EA +
Sbjct: 265 PDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEV 324
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+RM G + ++++ LI+G K V+E ++LL M + P++ +Y +L GL
Sbjct: 325 FDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSK 384
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
R +LV M +P ++Y L+ ++ ++ + + +V G P +
Sbjct: 385 SGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRT 444
Query: 376 WREIV 380
+ ++
Sbjct: 445 YNILI 449
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-SAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ +A+ L +M N P T+N +L+ L S ++ E + A G D N
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRAS-GQAPDLITYN 411
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+LL + L+ A + PN+RTY+ L+ GLC+ G ++ A + + + +
Sbjct: 412 VLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVK 471
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
G + T+NI+I+GLR++G ++E LL M G PN+ ++ ++ LL+K
Sbjct: 472 GCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLEK 525
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT-VTFNILISGLRKQGKVEEGMK 289
P++ + + L+ + + + L ++S+G + VT +I I+ L G++
Sbjct: 53 PSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFS 112
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
++ ++ +G + + ++ GL K R EA L + + S V Y LI+GLC
Sbjct: 113 VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLC 172
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
D +L+KM + G P + M+ +V
Sbjct: 173 KMGKTRDAIELLRKMEKGGVRPNLIMYNMVV 203
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 141/302 (46%), Gaps = 7/302 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRI-KVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN Y +I L +A R IED ++ + +E + + YN+ Y +G KA
Sbjct: 400 PNLHTYNTLICGLLRAGR---IEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKA 456
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ET M + P++ N L L E + ++ + G+ D+ N+++K
Sbjct: 457 VETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKC 516
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ G ++ A +L E + CEP+V ++L+ L + G V+EA+ + +RM+ +
Sbjct: 517 YSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPT 576
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+N L+SGL K+G+V++ ++L E M K C PN+ S+ +L A ++
Sbjct: 577 VVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFS 636
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV---LKKMVQQGFVPRMGMWREIVGCVT 384
+M P ++Y +I+GL + V W LKK + V + +V C
Sbjct: 637 KMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQ 696
Query: 385 FG 386
G
Sbjct: 697 IG 698
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 110/235 (46%)
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KA + DM + C P TFN++L + + E+ +Y + DA NI++
Sbjct: 806 KAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVI 865
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
L ++ NL+ A + + P RTY L+ GL + G +EEA L E M G
Sbjct: 866 SSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK 925
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ FNILI+G K G E +L +RM +G P+ SY ++ L R EA
Sbjct: 926 PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P F++Y ++I+GL + +E+ + +M +G VP + + ++
Sbjct: 986 FNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 125/283 (44%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +T+ I L +A + D +I +R+ E C D Y V+ AG++ A
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEG-CG-PDLVTYTVLIDALCNAGQLENAK 317
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M + P + +L+ + ++ G D IL+ L
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVL 377
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ + + AF D KQ PN+ TY+TL+ GL G +E+A LL MES G+
Sbjct: 378 CKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTA 437
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+NI I K G+ + ++ E+MK KG PN + LY L + R EAK +
Sbjct: 438 YTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNG 497
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ ++P V+Y ++ V++ +L +M++ G P
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 137/304 (45%), Gaps = 2/304 (0%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+ ++++K+ +P A Y +I +L + + D+ + +K + D F +N++
Sbjct: 774 IFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMK--NVGCAPDAFTFNMLLA 831
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+G+I++ E +M S C P T+N+V++ L + + +
Sbjct: 832 VHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRP 891
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
L+ GL + G LE A + +E C+PN ++ L++G + G+ E A L
Sbjct: 892 TPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLF 951
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+RM +EGI D ++ IL+ L G+V+E + +K G P+ +Y ++ GL
Sbjct: 952 KRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKS 1011
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+R EA L M + P +Y L+ L +VE + +++ G P + +
Sbjct: 1012 QRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTY 1071
Query: 377 REIV 380
++
Sbjct: 1072 NALI 1075
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 139/328 (42%), Gaps = 8/328 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIEDIM 114
+S EVL + ++ DPI +S S+ P T N + + R D +ED+
Sbjct: 87 VSEDEVLGVLKSMTDPIRALSYFYSISEF----PTVLHTTETCNFMLEFLRVHDKVEDMA 142
Query: 115 QRIKV--EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
+ +K+ R + + K ++ G + + L M + ++N +++L
Sbjct: 143 AVFEFMQKKIIRRDLDTYLTIFKAL-SIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHL 201
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
L+ + GE +Y G++ + L+ L + + E +L E PN
Sbjct: 202 LIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPN 261
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
V T++ + L G ++EA+ + RM+ EG D VT+ +LI L G++E +L
Sbjct: 262 VYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFV 321
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+MK G P+ Y +L D KE +M + P V++ L+ LC +
Sbjct: 322 KMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKAR 381
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ M +QG +P + + ++
Sbjct: 382 DFDEAFATFDVMRKQGILPNLHTYNTLI 409
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 134/305 (43%), Gaps = 12/305 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-- 140
K + P++ +Y +++K D ++ +++ +DG+ +V+ +
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQME-------ADGYMPDVVTFTILVDV 376
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
A +A T M P++ T+N ++ L+ A + + + +GV+
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPT 436
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A NI + ++G A ++ + PN+ + ++ L E G + EA +
Sbjct: 437 AYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFN 496
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+ G+ D+VT+N+++ K G+V+E + LL M GC P+ ++ L
Sbjct: 497 GLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAG 556
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
R EA ++ RM ++SP+ V+Y L+ GL + V+ + + M+++ P +
Sbjct: 557 RVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFN 616
Query: 378 EIVGC 382
++ C
Sbjct: 617 TLLDC 621
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 138/349 (39%), Gaps = 41/349 (11%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E L++ + D +V + + R+D + Y I L+ + ++ +++
Sbjct: 130 EFLRVHDKVEDMAAVFEFMQKKIIRRDLDT----YLTIFKALSIRGGLRQMTTVLNKMR- 184
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
K + + YN + +G +A+E M S PS+KT++ ++ L +
Sbjct: 185 -KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ + LG+ + I ++ L G ++ A+ + + C P++ TY+ L
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303
Query: 240 MHGLCEKGNVEEA----------------------------FGLLE-------RMESEGI 264
+ LC G +E A FG L+ +ME++G
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VTF IL+ L K +E + M+ +G PN +Y ++ GLL R +A +
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
L+G M + P+ +Y I +KM +G VP +
Sbjct: 424 LLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNI 472
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 91/235 (38%), Gaps = 37/235 (15%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
KLG+ N L+ L E E A+ + + C P+ T++ L+ + G +
Sbjct: 781 KLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKIT 840
Query: 251 EAFGLLERMESEGIDADTVTFNILIS---------------------------------- 276
E F L + M S D +T+NI+IS
Sbjct: 841 ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI 900
Query: 277 -GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
GL K G++EE M+L E M GC PN A + ++ G A +L RM+ E +
Sbjct: 901 DGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
P SY L+ LC V++ + ++ G P + I+ GK R
Sbjct: 961 PDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIIN--GLGKSQR 1013
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 126/251 (50%), Gaps = 1/251 (0%)
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+LC + + +I++Y G I ++E M Y PSV T N +L +V +
Sbjct: 117 RLCNSNPSVYDILIRVYLR-EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV 175
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ K + D NIL+ LC G+ E + Y++ + K P + TY+T++
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
H C+KG + A LL+ M+S+G+DAD T+N+LI L + ++ +G LL M+ + +
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
PN +Y ++ G ++ + A +L+ M+ +SP+ V++ LI G ++ ++ +
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 361 LKKMVQQGFVP 371
M +G P
Sbjct: 356 FYMMEAKGLTP 366
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 134/311 (43%), Gaps = 38/311 (12%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
+ +SV S L + KRK P+ A + ++IN L F+ +MQ K+EK
Sbjct: 173 EDVSVWSFLKEMLKRK-ICPDVATFNILINVLCAEGSFEKSSYLMQ--KMEKSGYAPTIV 229
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN + + GR AIE L M S
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSK-------------------------------- 257
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
GV+ D C N+L+ LC + + + +L + K+ PN TY+TL++G +G V
Sbjct: 258 ---GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
A LL M S G+ + VTFN LI G +G +E +K+ M+ KG P+ SY +
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L GL F A+ RM + ++Y +I GLC +++ +L +M + G
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 434
Query: 370 VPRMGMWREIV 380
P + + ++
Sbjct: 435 DPDIVTYSALI 445
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 135/300 (45%), Gaps = 15/300 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM--AGRIS 145
N N ++Y ++I R I+D ++ ++ L F+ Y I G++ +G
Sbjct: 120 NSNPSVYDILIRVYL---REGMIQDSLEIFRLMGLYGFNPSV-YTCNAILGSVVKSGEDV 175
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
L +M P V TFN+++N+L + + + + K G N +L
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
C+ G +AA +LD + + +V TY+ L+H LC + + + LL M I
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ VT+N LI+G +GKV +LL M G PN ++ ++ G + + F EA ++
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
M + ++PS VSY L+ GLC + + +GF RM VG +T+
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFD---------LARGFYMRMKRNGVCVGRITY 406
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 16/300 (5%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
S L Q ++ Y P Y +++ + RF A +++ +K + + +D YN++
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV--DADVCTYNMLI 270
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQGIYTS 188
+ RI+K L DM P+ T+N ++N +L++++L E+
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM------ 324
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+ + N L+ G GN + A + + P+ +Y L+ GLC+
Sbjct: 325 -LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 383
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ A G RM+ G+ +T+ +I GL K G ++E + LL M G P+ +Y
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G RF AKE+V R+ +SP+ + Y LI+ C +++ + + M+ +G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 146/363 (40%), Gaps = 58/363 (15%)
Query: 42 DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL 101
D+D Y + D + K + LRD +++ +PNE Y +IN
Sbjct: 260 DADVCTYNMLIHDLCRSNRIAKGYLLLRD-----------MRKRMIHPNEVTYNTLINGF 308
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK-----AIETLFDMPS 156
+ + ++ + S G N + + G IS+ A++ + M +
Sbjct: 309 SNEGKVLIASQLLNEM-------LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
PS ++ ++L+ L + +G Y + GV + ++ GLC+NG L+
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN---------------------------- 248
A +L+E K +P++ TYS L++G C+ G
Sbjct: 422 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 481
Query: 249 -------VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
++EA + E M EG D TFN+L++ L K GKV E + + M G P
Sbjct: 482 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 541
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N+ S+ ++ G + +A + M P+F +Y L+ GLC + + + L
Sbjct: 542 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 601
Query: 362 KKM 364
K +
Sbjct: 602 KSL 604
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 134/294 (45%), Gaps = 2/294 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L + K K + + Y ++I+ L ++ R A ++ R +++ ++ + +I +
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRI-AKGYLLLRDMRKRMIHPNEVTYNTLINGF 308
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
N G++ A + L +M S+ P+ TFN +++ +S + E ++ G+
Sbjct: 309 SN-EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 367
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+LL GLC+N + A + TY+ ++ GLC+ G ++EA LL
Sbjct: 368 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 427
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M +GID D VT++ LI+G K G+ + +++ R+ G PN Y ++Y
Sbjct: 428 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA + MI E + ++ L+ LC V + + ++ M G +P
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 541
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 134/339 (39%), Gaps = 51/339 (15%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI------YGNMAGRISKA 147
+ +++ L +A + E+ M+ C SDG N + YGN +G KA
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMR-------CMTSDGILPNTVSFDCLINGYGN-SGEGLKA 562
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M P+ T+ +L L E + S + +D N LL
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 622
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV---------EEAFG---- 254
+C++GNL A + E +++ P+ TY++L+ GLC KG EA G
Sbjct: 623 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 682
Query: 255 -----------------------LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
E+M++ G D VT N +I G + GK+E+ LL
Sbjct: 683 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 742
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
M + PN +Y +L+G +K + L +I + P ++ L+ G+C
Sbjct: 743 PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 802
Query: 352 KLVEDVDWVLKKMVQQGF-VPRMGMWREIVGCVTFGKDN 389
++E +LK + +G V R I C G+ N
Sbjct: 803 NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 841
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 14/280 (5%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ +LN+ SK +P+ Y+ +IN + RF ++I+ RI L +G Y+ +
Sbjct: 423 VVLLNEMSK-DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS--PNGIIYSTL 479
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G + +AI M TFN+++ L A E + G+
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ + L+ G +G AF V DE K P TY +L+ GLC+ G++ EA
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L+ + + DTV +N L++ + K G + + + L M + P+S +Y ++ GL
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 659
Query: 315 DKKR------FPEAKELVGRMICERMSPSFVSYKKLIHGL 348
K + F + E G ++ P+ V Y + G+
Sbjct: 660 RKGKTVIAILFAKEAEARGNVL-----PNKVMYTCFVDGM 694
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 123/287 (42%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+E Y ++++ L + FD R+K +C + + + N G +
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN--GFL 419
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ L +M P + T++ ++N + + I ++G+ + + L
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ C G L+ A + + + + T++ L+ LC+ G V EA + M S+GI
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+TV+F+ LI+G G+ + + + M G +P +Y +L GL EA++
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + + V Y L+ +C + + +MVQ+ +P
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 142/321 (44%), Gaps = 53/321 (16%)
Query: 77 VLNQYSKRKDYNPNEALY-TLIINKLAQAKR------FDAIEDIMQRIKVEKLCRF---- 125
+L+ YSKRKD + + LY ++I+N + K E M I ++ L F
Sbjct: 760 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 819
Query: 126 --SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
D + +N++ G I+ A + + M S T + ++++L + E +
Sbjct: 820 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 879
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN-CEPNVR-------- 234
+ +K G+ ++ L+ GLC G+++ AF V +E C PNV
Sbjct: 880 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939
Query: 235 --------------------------TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+++TLMH C+ GNV EA L M + G+ D
Sbjct: 940 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR-FPEA----K 323
V++N+LI+GL +G + +L E MKG G N+ +Y+ ++ GLL ++ F A K
Sbjct: 1000 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
Query: 324 ELVGRMICERMSPSFVSYKKL 344
+L+ R MS S S++ L
Sbjct: 1060 DLLARGFITSMSLSQDSHRNL 1080
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 154/385 (40%), Gaps = 76/385 (19%)
Query: 69 RDPISVISVL--NQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
R +VI++L + R + PN+ +YT ++ + +A ++ A I R +++ L
Sbjct: 660 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA--GIYFREQMDNLGHTP 717
Query: 127 DGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL----------------- 168
D N +I Y M G+I K + L +M + N P++ T+N+
Sbjct: 718 DIVTTNAMIDGYSRM-GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 169 ----VLNLLVSAKL--YGEIQGIYTS-----AAKL-------GVEIDACCLNILLKGLCE 210
+LN ++ KL + + GI S K+ GVE+D N+L+ C
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836
Query: 211 NGNLEAAF-----------------------------------YVLDEFPKQNCEPNVRT 235
NG + AF VL E KQ P R
Sbjct: 837 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 896
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y L++GLC G+++ AF + E M + I V + ++ L K GK +E LL M
Sbjct: 897 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 956
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
P AS+ +++ EA EL M + VSY LI GLC + +
Sbjct: 957 KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1016
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++M GF+ ++ ++
Sbjct: 1017 LAFELYEEMKGDGFLANATTYKALI 1041
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/298 (17%), Positives = 114/298 (38%), Gaps = 7/298 (2%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
+ N + + SV ++ +K ++P Y ++ L + E ++ +
Sbjct: 553 YGNSGEGLKAFSVFDEMTK-VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA- 610
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF-NLVLNLLVSAKLYGEIQ 183
D YN + +G ++KA+ +M + P T+ +L+ L K I
Sbjct: 611 -VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ A+ V + + G+ + G +A Y ++ P++ T + ++ G
Sbjct: 670 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 729
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
G +E+ LL M ++ + T+NIL+ G K+ V L + G P+
Sbjct: 730 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 789
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ ++ G+ + +++ IC + ++ LI C +++W
Sbjct: 790 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG---EINWAF 844
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 126/251 (50%), Gaps = 1/251 (0%)
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+LC + + +I++Y G I ++E M Y PSV T N +L +V +
Sbjct: 117 RLCNSNPSVYDILIRVYLR-EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV 175
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ K + D NIL+ LC G+ E + Y++ + K P + TY+T++
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
H C+KG + A LL+ M+S+G+DAD T+N+LI L + ++ +G LL M+ + +
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
PN +Y ++ G ++ + A +L+ M+ +SP+ V++ LI G ++ ++ +
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 361 LKKMVQQGFVP 371
M +G P
Sbjct: 356 FYMMEAKGLTP 366
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 134/311 (43%), Gaps = 38/311 (12%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
+ +SV S L + KRK P+ A + ++IN L F+ +MQ K+EK
Sbjct: 173 EDVSVWSFLKEMLKRK-ICPDVATFNILINVLCAEGSFEKSSYLMQ--KMEKSGYAPTIV 229
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN + + GR AIE L M S
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSK-------------------------------- 257
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
GV+ D C N+L+ LC + + + +L + K+ PN TY+TL++G +G V
Sbjct: 258 ---GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
A LL M S G+ + VTFN LI G +G +E +K+ M+ KG P+ SY +
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L GL F A+ RM + ++Y +I GLC +++ +L +M + G
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 434
Query: 370 VPRMGMWREIV 380
P + + ++
Sbjct: 435 DPDIVTYSALI 445
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 135/300 (45%), Gaps = 15/300 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM--AGRIS 145
N N ++Y ++I R I+D ++ ++ L F+ Y I G++ +G
Sbjct: 120 NSNPSVYDILIRVYL---REGMIQDSLEIFRLMGLYGFNPSV-YTCNAILGSVVKSGEDV 175
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
L +M P V TFN+++N+L + + + + K G N +L
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
C+ G +AA +LD + + +V TY+ L+H LC + + + LL M I
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ VT+N LI+G +GKV +LL M G PN ++ ++ G + + F EA ++
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
M + ++PS VSY L+ GLC + + +GF RM VG +T+
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFD---------LARGFYMRMKRNGVCVGRITY 406
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 16/300 (5%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
S L Q ++ Y P Y +++ + RF A +++ +K + + +D YN++
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV--DADVCTYNMLI 270
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQGIYTS 188
+ RI+K L DM P+ T+N ++N +L++++L E+
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM------ 324
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+ + N L+ G GN + A + + P+ +Y L+ GLC+
Sbjct: 325 -LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 383
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ A G RM+ G+ +T+ +I GL K G ++E + LL M G P+ +Y
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G RF AKE+V R+ +SP+ + Y LI+ C +++ + + M+ +G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 146/363 (40%), Gaps = 58/363 (15%)
Query: 42 DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL 101
D+D Y + D + K + LRD +++ +PNE Y +IN
Sbjct: 260 DADVCTYNMLIHDLCRSNRIAKGYLLLRD-----------MRKRMIHPNEVTYNTLINGF 308
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK-----AIETLFDMPS 156
+ + ++ + S G N + + G IS+ A++ + M +
Sbjct: 309 SNEGKVLIASQLLNEM-------LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
PS ++ ++L+ L + +G Y + GV + ++ GLC+NG L+
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN---------------------------- 248
A +L+E K +P++ TYS L++G C+ G
Sbjct: 422 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 481
Query: 249 -------VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
++EA + E M EG D TFN+L++ L K GKV E + + M G P
Sbjct: 482 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 541
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N+ S+ ++ G + +A + M P+F +Y L+ GLC + + + L
Sbjct: 542 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 601
Query: 362 KKM 364
K +
Sbjct: 602 KSL 604
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 134/294 (45%), Gaps = 2/294 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L + K K + + Y ++I+ L ++ R A ++ R +++ ++ + +I +
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRI-AKGYLLLRDMRKRMIHPNEVTYNTLINGF 308
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
N G++ A + L +M S+ P+ TFN +++ +S + E ++ G+
Sbjct: 309 SN-EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 367
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+LL GLC+N + A + TY+ ++ GLC+ G ++EA LL
Sbjct: 368 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 427
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M +GID D VT++ LI+G K G+ + +++ R+ G PN Y ++Y
Sbjct: 428 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA + MI E + ++ L+ LC V + + ++ M G +P
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 541
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 134/339 (39%), Gaps = 51/339 (15%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI------YGNMAGRISKA 147
+ +++ L +A + E+ M+ C SDG N + YGN +G KA
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMR-------CMTSDGILPNTVSFDCLINGYGN-SGEGLKA 562
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M P+ T+ +L L E + S + +D N LL
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 622
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV---------EEAFG---- 254
+C++GNL A + E +++ P+ TY++L+ GLC KG EA G
Sbjct: 623 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 682
Query: 255 -----------------------LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
E+M++ G D VT N +I G + GK+E+ LL
Sbjct: 683 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 742
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
M + PN +Y +L+G +K + L +I + P ++ L+ G+C
Sbjct: 743 PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 802
Query: 352 KLVEDVDWVLKKMVQQGF-VPRMGMWREIVGCVTFGKDN 389
++E +LK + +G V R I C G+ N
Sbjct: 803 NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 841
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 14/280 (5%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ +LN+ SK +P+ Y+ +IN + RF ++I+ RI L +G Y+ +
Sbjct: 423 VVLLNEMSK-DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS--PNGIIYSTL 479
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G + +AI M TFN+++ L A E + G+
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ + L+ G +G AF V DE K P TY +L+ GLC+ G++ EA
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L+ + + DTV +N L++ + K G + + + L M + P+S +Y ++ GL
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 659
Query: 315 DKKR------FPEAKELVGRMICERMSPSFVSYKKLIHGL 348
K + F + E G ++ P+ V Y + G+
Sbjct: 660 RKGKTVIAILFAKEAEARGNVL-----PNKVMYTCFVDGM 694
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 142/321 (44%), Gaps = 53/321 (16%)
Query: 77 VLNQYSKRKDYNPNEALY-TLIINKLAQAKR------FDAIEDIMQRIKVEKLCRF---- 125
+L+ YSKRKD + + LY ++I+N + K E M I ++ L F
Sbjct: 760 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 819
Query: 126 --SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
D + +N++ G I+ A + + M S T + ++++L + E +
Sbjct: 820 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 879
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN-CEPNVR-------- 234
+ +K G+ ++ L+ GLC G+++ AF V +E C PNV
Sbjct: 880 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939
Query: 235 --------------------------TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+++TLMH C+ GNV EA L M + G+ D
Sbjct: 940 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR-FPEA----K 323
V++N+LI+GL +G + +L E MKG G N+ +Y+ ++ GLL ++ F A K
Sbjct: 1000 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
Query: 324 ELVGRMICERMSPSFVSYKKL 344
+L+ R MS S S++ L
Sbjct: 1060 DLLARGFITSMSLSQDSHRNL 1080
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 123/287 (42%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+E Y ++++ L + FD R+K +C + + + N G +
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN--GFL 419
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ L +M P + T++ ++N + + I ++G+ + + L
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ C G L+ A + + + + T++ L+ LC+ G V EA + M S+GI
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+TV+F+ LI+G G+ + + + M G +P +Y +L GL EA++
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + + V Y L+ +C + + +MVQ+ +P
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 154/385 (40%), Gaps = 76/385 (19%)
Query: 69 RDPISVISVL--NQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
R +VI++L + R + PN+ +YT ++ + +A ++ A I R +++ L
Sbjct: 660 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA--GIYFREQMDNLGHTP 717
Query: 127 DGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL----------------- 168
D N +I Y M G+I K + L +M + N P++ T+N+
Sbjct: 718 DIVTTNAMIDGYSRM-GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 169 ----VLNLLVSAKL--YGEIQGIYTS-----AAKL-------GVEIDACCLNILLKGLCE 210
+LN ++ KL + + GI S K+ GVE+D N+L+ C
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836
Query: 211 NGNLEAAF-----------------------------------YVLDEFPKQNCEPNVRT 235
NG + AF VL E KQ P R
Sbjct: 837 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 896
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y L++GLC G+++ AF + E M + I V + ++ L K GK +E LL M
Sbjct: 897 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 956
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
P AS+ +++ EA EL M + VSY LI GLC + +
Sbjct: 957 KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1016
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++M GF+ ++ ++
Sbjct: 1017 LAFELYEEMKGDGFLANATTYKALI 1041
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/298 (17%), Positives = 114/298 (38%), Gaps = 7/298 (2%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
+ N + + SV ++ +K ++P Y ++ L + E ++ +
Sbjct: 553 YGNSGEGLKAFSVFDEMTK-VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA- 610
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF-NLVLNLLVSAKLYGEIQ 183
D YN + +G ++KA+ +M + P T+ +L+ L K I
Sbjct: 611 -VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ A+ V + + G+ + G +A Y ++ P++ T + ++ G
Sbjct: 670 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 729
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
G +E+ LL M ++ + T+NIL+ G K+ V L + G P+
Sbjct: 730 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 789
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ ++ G+ + +++ IC + ++ LI C +++W
Sbjct: 790 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG---EINWAF 844
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 141/310 (45%), Gaps = 17/310 (5%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN-------MAGRISK 146
Y +I+ L + F + ++Q + K + F +++ G +G I+
Sbjct: 4 YCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITA 63
Query: 147 AIETLFDMPSYNC---------WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+E+ F + C W T VL L+ + + + G Y + G
Sbjct: 64 YLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPAS 123
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L
Sbjct: 124 LYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 183
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M + G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G
Sbjct: 184 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 243
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
R A E+ +M+ + + P ++Y LI+GLC + + ++ +M +G P +
Sbjct: 244 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYT 303
Query: 378 EIV-GCVTFG 386
++ GC G
Sbjct: 304 TLIDGCCKEG 313
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + E + +
Sbjct: 125 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 183
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 184 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 243
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G + + L++ M KG P+ +Y
Sbjct: 244 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYT 303
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y +I GLC + D + +L++M+
Sbjct: 304 TLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSV 363
Query: 368 GFVPRMGMWREIV 380
G P G + I+
Sbjct: 364 GLKPDTGTYTMII 376
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 110/211 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 192 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 251
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++ +A GL++ M +G+ D T+ LI G K
Sbjct: 252 YKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCK 311
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 312 EGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGT 371
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 372 YTMIINEFCKKGDVWKGSKLLKEMQRNGHVP 402
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 112/229 (48%), Gaps = 10/229 (4%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 191 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL--VPNGVTFTTLIDGHCKNGRVDLA 248
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + G+ + G++ D L+ G
Sbjct: 249 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDG 308
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVR----TYSTLMHGLCEKGNVEEAFGLLERMESEG 263
C+ G+L+AAF E K+ + N+R Y+ ++ GLC++G +A +L M S G
Sbjct: 309 CCKEGDLDAAF----EHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVG 364
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ DT T+ ++I+ K+G V +G KLL+ M+ G P+ +Y ++ G
Sbjct: 365 LKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 127/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + +M S+ + D +T+N LI GL K+G +++ L + M KG P+ +Y
Sbjct: 256 RVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C V+ L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VIEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ + G + A V D K P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M++ G+ D T+++LI+GL K+ K+++ +L + M G PN ++
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ + +M +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQS-VFDAITKWGLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L + M +G+ D +T+ LI G
Sbjct: 263 IYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G+VP
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K G+ N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ +M + P+ +Y ++YGL K +A++L M + + P
Sbjct: 252 CKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKE 340
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A + DE + +P+ TY+TL+ G C
Sbjct: 263 IYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV--PNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ GLC++G +A +L M S G+ +
Sbjct: 321 SCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
T+ ++I+ K+G V G KLL+ M+ G P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 128/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV +FN ++N + E +
Sbjct: 141 YFFNILMHSFCKEGEIRLA-QSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKK 199
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ + DE PN T++TL+ G C+ G
Sbjct: 200 AMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNG 259
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D VT+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 260 RVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 319
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 320 TLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 379
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 380 GLKPEIGTYTMII 392
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 84 GFLRDAIECY-----RLTK--EHKFRVPFDTC-------RKVLEHLMKLKYFKLVWGFYE 129
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ C+ G + A V D K P+V +++TLM+G + G
Sbjct: 130 ESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 189
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ E F L + M++ G+ D T+++LI+GL K+ K+++ +L + M G PN ++
Sbjct: 190 DLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFT 249
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP V+Y LI+GLC + ++ ++ +M +
Sbjct: 250 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMK 309
Query: 368 GFVP 371
G P
Sbjct: 310 GLKP 313
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKAIETLFDMPSYN 158
+LAQ+ FDAI R V +G+ IK+ N R+ KA M +
Sbjct: 157 RLAQS-VFDAITKWGLRPSVVSFNTLMNGY----IKLGDLNEXFRLKKA------MQASG 205
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 206 VQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAM 265
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 266 EIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGS 325
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K+G +E + RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 326 CKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 385
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V ++K+M + G+VP
Sbjct: 386 GTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVP 418
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 267 IYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSC 326
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 327 KEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 386
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+Y ++ K +L+ M + PS V+Y L++G
Sbjct: 387 TYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 17/256 (6%)
Query: 72 ISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIMQR 116
+S +++N Y K D N P+ Y+++IN L + + D ++
Sbjct: 176 VSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDE 235
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+ L +G + + GR+ A+E M S + P + T+N ++ L
Sbjct: 236 MLDXGLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKK 293
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ Q + + G++ D L+ G C+ G+LE AF K+N + Y
Sbjct: 294 GDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAY 353
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+ L+ GLC++G +A +L M S G+ + T+ ++I+ K+G V G KL++ M+
Sbjct: 354 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQR 413
Query: 297 KGCYPNSASYQEVLYG 312
G P+ +Y ++ G
Sbjct: 414 DGYVPSVVTYNVLMNG 429
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 145/300 (48%), Gaps = 22/300 (7%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI--------- 134
R+ PN + ++IN L + + + D+M+ +KV G+ NV+
Sbjct: 216 RRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY-------GYSPNVVSYNTLIDGY 268
Query: 135 -KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKL 192
K+ GN G++ KA L +M P++ TFN++++ L G ++ ++
Sbjct: 269 CKLGGN--GKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLK-VFKEMLDQ 325
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
V + N L+ GLC G + A + D+ +PN+ TY +L++G C+ G ++EA
Sbjct: 326 DVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEA 385
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ + ++ +G T +N+LI K GK+++G L E M+ +G P+ +Y ++ G
Sbjct: 386 LDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L AK+L ++ + + P V++ L+ G C++ +LK+M + G PR
Sbjct: 446 LCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPR 504
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 116/232 (50%), Gaps = 2/232 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G+I++AI M S P++ T++ ++N + E ++ S G
Sbjct: 344 GGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRM 403
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ C+ G ++ F + +E ++ P+V TY+ L+ GLC GN+E A L +++
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++G+ D VTF+IL+ G +G+ + LL+ M G P +Y ++ G +
Sbjct: 464 NKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLK 522
Query: 321 EAKELVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A + +M E R+ + SY L+ G + +ED + +L +M+++G VP
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 111/241 (46%), Gaps = 4/241 (1%)
Query: 145 SKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
S +E L+ +M P+V TFN+V+N L + + + G + N
Sbjct: 204 SADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNT 263
Query: 204 LLKGLCE---NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G C+ NG + A VL E + PN+ T++ L+ G + N+ + + + M
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEML 323
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ + + +T+N LI+GL GK+ E + + ++M G PN +Y ++ G
Sbjct: 324 DQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMK 383
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA ++ + + P+ Y LI C ++D + ++M ++G VP +G + ++
Sbjct: 384 EALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 381 G 381
Sbjct: 444 A 444
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 132/293 (45%), Gaps = 30/293 (10%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-- 142
+D PN Y +IN L + + E I R K+ S G N+I + + G
Sbjct: 325 QDVIPNVITYNSLINGLCNGGKIN--EAIGMRDKM-----VSAGVQPNLITYHSLINGFC 377
Query: 143 ---RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ +A++ + P+ + +N++++ + + + G+ D
Sbjct: 378 KNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVG 437
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ GLC NGN+EAA + D+ + P++ T+ LM G C +G +A LL+ M
Sbjct: 438 TYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEM 496
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGLLDKKR 318
G+ +T+NI++ G K+G ++ + +M K + N ASY +L G K +
Sbjct: 497 SKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A L+ M+ + + P+ ++Y + V ++MV +GFVP
Sbjct: 557 LEDANMLLNEMLEKGLVPNRITY----------------EIVKEEMVDKGFVP 593
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 4/234 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +IN + D+ +K + R + + +I Y + G+I
Sbjct: 364 PNLITYHSLINGFCKNGMMKEALDMFDSVKGQG-TRPTTRMYNMLIDAYCKL-GKIDDGF 421
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M P V T+N ++ L + ++ G+ D +IL++G
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLP-DLVTFHILMEGY 480
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-IDAD 267
C G A +L E K +P TY+ +M G C++GN++ A + +ME E + +
Sbjct: 481 CSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMN 540
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
++N+L+ G ++GK+E+ LL M KG PN +Y+ V ++DK P+
Sbjct: 541 VASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPD 594
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 145/341 (42%), Gaps = 25/341 (7%)
Query: 45 HHAYKLN-HKDWLSPTEVLK-IFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLA 102
H KL H ++P E+ + + S+ +P + K +D + + L +++ LA
Sbjct: 53 QHWSKLGFHVKDINPNELFRQLISSELNPDLCLRYYTWLVKNRDISVSLELTFKLLHSLA 112
Query: 103 QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPS 162
AKR+ I F DGF N + +I M C S
Sbjct: 113 NAKRYSKIRS------------FLDGFVRNG-------SDHQVHSIFHAISMCDNVCVNS 153
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
+ LVL +++ + + + G ++ A L+ L + Y+
Sbjct: 154 IIADMLVLAYANNSRFELGFEA-FKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYK 212
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG---LR 279
E ++ +PNV T++ +++ LC+ G + +A ++E M+ G + V++N LI G L
Sbjct: 213 EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLG 272
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
GK+ + +L+ M PN ++ ++ G P + ++ M+ + + P+ +
Sbjct: 273 GNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVI 332
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+Y LI+GLCN + + + KMV G P + + ++
Sbjct: 333 TYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLI 373
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 26/311 (8%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLA-QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+L + +RK +PN Y +IN + K F+A E + E L R G N I
Sbjct: 310 LLQEMLERK-ISPNVVTYNALINAFVKEGKFFEAAE-----LYDEMLPR---GIIPNTIT 360
Query: 136 IYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
+ G R+ A + + M + C P V TF +++ AK + +
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ G+ + N L+ G C G+L AA + + P++ T +TL+ GLC+ G ++
Sbjct: 421 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 480
Query: 251 EAFGLLERMESE-----------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+A + + M+ G++ D +T+NILI GL +GK E +L E M +G
Sbjct: 481 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P++ +Y ++ GL + R EA ++ M + SP+ V++ LI+G C V+D
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 600
Query: 360 VLKKMVQQGFV 370
+ +M ++G V
Sbjct: 601 LFCEMGRRGIV 611
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 158/357 (44%), Gaps = 48/357 (13%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
D +S +++L + + PN +Y+ II+ L + R ++ I+++ F +
Sbjct: 232 DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLF--IEMQDKGIFPNIV 289
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN + ++GR S A L +M P+V T+N ++N V + E +Y
Sbjct: 290 TYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEM 349
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAA---FYV-------------------------- 220
G+ + N ++ G C+ L+AA FY+
Sbjct: 350 LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 409
Query: 221 ------LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
L E P++ N TY+TL+HG C G++ A L ++M S G+ D VT N L
Sbjct: 410 DDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 469
Query: 275 ISGLRKQGKVEEGMKLLERMKGK-----------GCYPNSASYQEVLYGLLDKKRFPEAK 323
+ GL GK+++ +++ + M+ G P+ +Y ++ GL+++ +F EA+
Sbjct: 470 LDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAE 529
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL M + P ++Y +I GLC Q +++ + M + F P + + ++
Sbjct: 530 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 5/219 (2%)
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
+ +F +++ S + KLG+ D LL GLC + + A LD
Sbjct: 116 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEA---LD 172
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
F Q C P+V T++TLM+GLC +G V EA LL+RM G+ D +T+ + G+ K G
Sbjct: 173 LF-HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMG 231
Query: 283 KVEEGMKLLERMKG-KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
+ LL +M+ PN Y ++ GL R ++ L M + + P+ V+Y
Sbjct: 232 DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTY 291
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+I G C +L++M+++ P + + ++
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALI 330
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 12/228 (5%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V ++ +++ L + + ++ G+ + N ++ G C +G AA +
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L E ++ PNV TY+ L++ ++G EA L + M GI +T+T+N +I G K
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
Q +++ + M KGC P+ ++ ++ G KR + EL+ M + + V+
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430
Query: 341 YKKLIHGLCNQKLVEDVDWVL---KKMVQQGFVPRMGMWREIVGCVTF 385
Y LIHG C LV D++ L ++M+ G P +IV C T
Sbjct: 431 YNTLIHGFC---LVGDLNAALDLSQQMISSGVCP------DIVTCNTL 469
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 108/241 (44%), Gaps = 9/241 (3%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ AI+ DM PSV FN ++ +V + + +Y + + D I
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+K C L A + K P+V T++TL+HGLC V EA L ++
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D +TF L++GL ++G+V E + LL+RM G P+ +Y + G+ A
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 324 ELVGRMICERMS---PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ +M E +S P+ V Y +I GLC D + +M +G P + + ++
Sbjct: 238 NLLRKM--EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMI 295
Query: 381 G 381
G
Sbjct: 296 G 296
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 140/292 (47%), Gaps = 15/292 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGR 143
K +P+ +T +I+ AKR D +++ + L ++ YN + I+G + G
Sbjct: 387 KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL--VANTVTYNTL-IHGFCLVGD 443
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-------SAKLYGEIQ----GIYTSAAKL 192
++ A++ M S P + T N +L+ L + +++ +Q + S
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GVE D NIL+ GL G A + +E P + P+ TYS+++ GLC++ ++EA
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ M S+ + VTFN LI+G K G+V++G++L M +G ++ Y ++YG
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A ++ MI + P ++ + ++ G +++ +E +L+ +
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 4/168 (2%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G E LE A + + + P+V ++ LM + + L ++ME +
Sbjct: 52 LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +F ILI K+ + ++ G +P+ ++ +L+GL R EA
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L IC P +++ L++GLC + V + +L +MV+ G P
Sbjct: 172 DLF-HQICR---PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQP 215
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 75/169 (44%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN++ G+ +A E +MP P T++ +++ L E ++
Sbjct: 508 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S + N L+ G C+ G ++ + E ++ + Y TL++G +
Sbjct: 568 VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKV 627
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
GN+ A + + M S G+ DT+T +++G + ++E + +LE ++
Sbjct: 628 GNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 152/345 (44%), Gaps = 31/345 (8%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLA-QAKRFDAIE- 111
D LS T ++ F L SVL + K PN ++ +IN + K AIE
Sbjct: 125 DVLSLTILINCFCRLCHVDYGFSVLGKIIKL-GLEPNVITFSTLINGFCIEGKIGRAIEL 183
Query: 112 -DIM-----------QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
D+M I ++ LCR G+ ++ I+ L M C
Sbjct: 184 FDVMVARGYKPNVHSYSIIIKGLCR----------------VGKTTEVIKLLEHMKVVGC 227
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V +N +++ L +L E I+ G+ L+ GL G + AF
Sbjct: 228 EPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFG 287
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+L+E N P++ +S L+ +C++G V EA +L+ M G++ D T+N L++G
Sbjct: 288 LLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYC 347
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
+ +V E K+ E M KG P+ S+ ++ G KR EAK+L M + P V
Sbjct: 348 LRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTV 407
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
SY LI GLC + + + + K M G+ P + + ++ C++
Sbjct: 408 SYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLS 452
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 143/304 (47%), Gaps = 3/304 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ Y PN Y++II L + + + +++ +KV C D YN I +
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVG-CE-PDVVIYNTIVDRLCKDRLV 247
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
++A+ M P+V T+ +++ L + + E G+ + D ++L
Sbjct: 248 NEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVL 307
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ +C+ G + A +L + EP+V TY+TLM+G C + V EA + E M S+G
Sbjct: 308 IDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGR 367
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +F+IL++G K +++E +L + M +G P++ SY ++ GL +R EA+E
Sbjct: 368 MPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEE 427
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCV 383
L M P+ V+Y L+ L Q ++ + + M G P + + ++ G
Sbjct: 428 LFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMC 487
Query: 384 TFGK 387
+GK
Sbjct: 488 KYGK 491
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I+ A+ M + N PS+ F + + LV K Y + + G+ D L I
Sbjct: 72 INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C +++ F VL + K EPNV T+STL++G C +G + A L + M + G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ +++I+I GL + GK E +KLLE MK GC P+ Y ++ L + EA
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ +M + P+ V+Y LIHGL N ++ +L +M +P +
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDL 301
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 127/286 (44%), Gaps = 2/286 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P YT +I+ L R+ ++ +K + D ++V+ G +S+A
Sbjct: 264 PTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNI--MPDLVAFSVLIDIMCKEGEVSEAR 321
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M P V T+N ++N E + ++ G D +IL+ G
Sbjct: 322 VILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGY 381
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ ++ A + DE + P+ +Y+TL+ GLC+ EA L + M S G +
Sbjct: 382 CKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNL 441
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++IL+ L KQG +++ M L M+ G P+ +Y ++ G+ +F +A+EL
Sbjct: 442 VTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAE 501
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ + + P+ I G+C L+++ ++M + P G
Sbjct: 502 LSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQG 547
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%)
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
N+ A + N P++ + L L + + L ++ME GI D ++
Sbjct: 71 NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
ILI+ + V+ G +L ++ G PN ++ ++ G + + A EL M+
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P+ SY +I GLC +V +L+ M G P + ++ IV
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIV 238
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 150/320 (46%), Gaps = 9/320 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
LSP +LK+ + P+S ++V + +R ++P+ A++ I+ ++A +
Sbjct: 8 LSPHRLLKLLKAEKSPLSALNVFDAAVRRPGFSPSSAVFHHILRRVAADPGL--LLAHAP 65
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFNLVLNLLV 174
RI C + ++K Y ++A+ MP + C P++++FN +LN V
Sbjct: 66 RIIAAIHCPCPEDVPLTLLKAYAKTR-MPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFV 124
Query: 175 SAKLYGEIQGI--YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
+ + + Y AA++ ++ N+L+K +C+ G E +L P+
Sbjct: 125 ESHQWARAENFFKYFEAARVSPNVET--YNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPD 182
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TY TL+ G+ + G++ A + + M G++ D V +N++I G K+G + ++ E
Sbjct: 183 RITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWE 242
Query: 293 R-MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
R ++ + +P+ SY ++ GL RF E E+ RM +Y LIHGL
Sbjct: 243 RLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEA 302
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
+ V ++MV +G P
Sbjct: 303 GDLGGARKVYEEMVGRGVRP 322
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 147/325 (45%), Gaps = 36/325 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P+ Y ++I+ L + RF +I +R+K + R D F Y+ + I+G + AG + A
Sbjct: 252 PSVVSYNVMISGLCKCGRFSEGLEIWERMKKNE--RKCDLFTYSAL-IHGLSEAGDLGGA 308
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV------------- 194
+ +M P V T N +LN L A E ++ K +
Sbjct: 309 RKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGL 368
Query: 195 -----------------EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR--T 235
E D+ +++ GLC NG + A VL+E + +V
Sbjct: 369 FENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFA 428
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
YS+L++ LC++G ++EA G++E M G ++ N+LI G K K++ +K+ M
Sbjct: 429 YSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMS 488
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
GKGC SY ++ GLL +RF EA + V M+ + P ++Y LI GL +++
Sbjct: 489 GKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMD 548
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + G P + M+ ++
Sbjct: 549 AALRLWHQFLDTGHKPDIIMYNIVI 573
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 1/244 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ +A + M C + N++++ V ++ + G +
Sbjct: 440 GRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSY 499
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ GL A+ ++E ++ +P++ TYSTL+ GL E ++ A L +
Sbjct: 500 NILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLD 559
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D + +NI+I L GKVE+ ++L ++ K C N ++ ++ G
Sbjct: 560 TGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVTHNTIMEGFYKVGNCEM 618
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A ++ ++ + + P +SY + GLC+ V D L + +GF+P W +V
Sbjct: 619 ASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVR 678
Query: 382 CVTF 385
V F
Sbjct: 679 AVIF 682
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 26/227 (11%)
Query: 137 YGNMAGRISK------AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YG + G ++K A+E +M P V +N++++ +G + A
Sbjct: 186 YGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFK-------RGDFVKAG 238
Query: 191 KLGVEI--------DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
++ + N+++ GLC+ G + + K + ++ TYS L+HG
Sbjct: 239 EMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHG 298
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
L E G++ A + E M G+ D VT N +++GL K G VEE +L E M GK N
Sbjct: 299 LSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEM-GKCSLRN 357
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
SY L GL + + +A L + + +Y ++HGLC
Sbjct: 358 VRSYNIFLKGLFENGKVDDAMMLWDGL----LEADSATYGVVVHGLC 400
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 122/269 (45%), Gaps = 39/269 (14%)
Query: 75 ISVLNQYSKRKD-YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ VL + R+ + +E Y+ +IN L + R D + +++ + ++ C+F+ +
Sbjct: 409 LQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMN-KRGCKFNSHVCNVL 467
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE------------ 181
I + + ++ A++ +M C +V ++N+++N L+ A+ + E
Sbjct: 468 IDGFVKHS-KLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKG 526
Query: 182 -----------IQGIYTS-----AAKL-------GVEIDACCLNILLKGLCENGNLEAAF 218
I G+Y S A +L G + D NI++ LC +G +E A
Sbjct: 527 WKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDAL 586
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ ++ C N+ T++T+M G + GN E A + + + + D +++NI + GL
Sbjct: 587 QLYSTLRQKKC-VNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGL 645
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
G+V + + L+ +G P + ++
Sbjct: 646 CSCGRVTDAVGFLDDALVRGFLPTAITWN 674
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 84/188 (44%), Gaps = 15/188 (7%)
Query: 94 YTLIINKLAQAKRF----DAIEDIMQRIKVEKLCRFSD--GFFYNVIKIYGNMAGRISKA 147
Y ++IN L +A+RF D + +++++ + +S G Y NM +
Sbjct: 499 YNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYE-----SNMMDAALRL 553
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
D P + +N+V++ L S+ + +Y++ + ++ N +++G
Sbjct: 554 WHQFLDTGHK---PDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEG 609
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ GN E A + + +P++ +Y+ + GLC G V +A G L+ G
Sbjct: 610 FYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPT 669
Query: 268 TVTFNILI 275
+T+NIL+
Sbjct: 670 AITWNILV 677
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 147/305 (48%), Gaps = 10/305 (3%)
Query: 81 YSKRKDYN--PNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIK 135
Y + D N PN +YT +I + R + I + M R+ + + V K
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFK 561
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
AG I K ++ + P +++ ++++ LV A E ++ + + G
Sbjct: 562 -----AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCV 616
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+D N ++ G C++G + A+ +L+E + EP V TY +++ GL + ++EA+ L
Sbjct: 617 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYML 676
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
E +S+GI+ + V ++ LI G K G+++E ++E + KG PN ++ +L L+
Sbjct: 677 FEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 736
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
+ EA M + +P++++Y LIHGLC + ++M +QGF P +
Sbjct: 737 AEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFT 796
Query: 376 WREIV 380
+ ++
Sbjct: 797 YTTMI 801
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 2/288 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +++++L +A+R D I + + K CR + ++I+ G GR+ +A
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLD-HKTCRPDAVTYCSLIEGLGRH-GRVDEAY 499
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M N P+ + ++ + IY +LG D LN + +
Sbjct: 500 KLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCV 559
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G +E + E P+ R+Y+ L+HGL + G EA+ L M+ +G DT
Sbjct: 560 FKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+N +I G K GKV + +LLE MK KG P +Y V+ GL R EA L
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ + + V Y LI G +++ ++++++Q+G P + W
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 727
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-- 140
K K + P Y +I+ LA+ R D + + K S G NV+ IY ++
Sbjct: 646 KTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK-------SKGIELNVV-IYSSLID 697
Query: 141 ----AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
GRI +A + ++ P+V T+N +L+ LV A+ E + S L
Sbjct: 698 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTP 757
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ +IL+ GLC+ AF E KQ +PNV TY+T++ GL + GN+ EA L
Sbjct: 758 NYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLF 817
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD- 315
E+ + +G AD+ +N +I GL + + +L E + KGC + Y + LLD
Sbjct: 818 EKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGC----SIYTKTCVVLLDS 873
Query: 316 --KKRFPEAKELVGRMICE 332
K E +VG ++ E
Sbjct: 874 LHKAECIEQAAIVGAVLRE 892
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 147/327 (44%), Gaps = 8/327 (2%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
T ++++F+ + +S+L++ K P+ LY + I+ +A + D +K
Sbjct: 239 TTLIRVFAREGRVDAALSLLDEM-KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMK 297
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
L D + ++I + A R+++A+E M P +N ++ A
Sbjct: 298 ANGLV-LDDVTYTSMIGVLCK-ADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGK 355
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ + + + G N +L L G ++ A +E K++ PN+ TY+
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNI 414
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++ LC+ G +E A + + M+ G+ + +T NI++ L K ++++ + E + K
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKT 474
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL--CNQKLVED 356
C P++ +Y ++ GL R EA +L +M+ P+ V Y LI C +K ED
Sbjct: 475 CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRK--ED 532
Query: 357 VDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ +M++ G P + + + CV
Sbjct: 533 GHKIYNEMLRLGCSPDLLLLNTYMDCV 559
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 132/303 (43%), Gaps = 3/303 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L + +RK P+ Y I++ L + + D + +K + + S YN++
Sbjct: 362 LLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLST---YNIMIDM 418
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
AG++ A+ M +P+V T N++++ L A+ + I+ D
Sbjct: 419 LCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPD 478
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A L++GL +G ++ A+ + ++ N PN Y++L+ + G E+ +
Sbjct: 479 AVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYN 538
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M G D + N + + K G++E+G L + +K G P++ SY +++GL+
Sbjct: 539 EMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAG 598
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
EA EL M + +Y +I G C V +L++M +G P + +
Sbjct: 599 FAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYG 658
Query: 378 EIV 380
++
Sbjct: 659 SVI 661
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/322 (19%), Positives = 141/322 (43%), Gaps = 7/322 (2%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
+P V+ + L+D + ++ + D Y ++ +A+ ++F+ +E I++
Sbjct: 96 NPELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEE 155
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+ + ++ V+ + ++ +A + M P+ + ++ L ++
Sbjct: 156 MSIAGFGPSNNTCIEIVLSFIKSR--KLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTS 213
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ + ++ +LG ++ L++ G ++AA +LDE + EP+V Y
Sbjct: 214 RDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLY 273
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+ + + G V+ A+ M++ G+ D VT+ +I L K ++ E ++L E M
Sbjct: 274 NVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQ 333
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
P + +Y ++ G +F +A L+ R + PS VSY ++ L +
Sbjct: 334 NKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKG---Q 390
Query: 357 VDWVLKKM--VQQGFVPRMGMW 376
VD LKK +++ +P + +
Sbjct: 391 VDEALKKFEEMKKDAIPNLSTY 412
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
NV ++TL+ +G V+ A LL+ M+S ++ D V +N+ I K GKV+ K
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXF 293
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
MK G + +Y ++ L R EA EL M + P +Y +I G
Sbjct: 294 HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMA 353
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
ED +L++ ++G +P + + I+ C+
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385
>gi|449468059|ref|XP_004151739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 225
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 1/208 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ T+ +L L G+ + ++ G+ D+C I L GLC+NG L A
Sbjct: 14 PNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLCKNGCLYEAMEH 73
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
++ N + ++ +Y+ L+ GLC+ G +E A+ L E++ EG+ +D VT+NI+I G K
Sbjct: 74 FNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCK 133
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+V++ L E+M+ GC P+ +Y +L G + E +L+ +MI MSP +S
Sbjct: 134 VGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAIS 193
Query: 341 YKKLIHGL-CNQKLVEDVDWVLKKMVQQ 367
+I L ++K E +D + + +VQ+
Sbjct: 194 CNIVIDMLRKDEKYQECLDLLPRFLVQE 221
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 94/190 (49%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ A + + +Y + + L+ L E + +++D
Sbjct: 29 TGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLCKNGCLYEAMEHFNQLKSYNIKLDIES 88
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ GLC+ G LE A+ + ++ ++ + +V TY+ ++HG C+ G V++A L E+ME
Sbjct: 89 YNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCKVGQVDKANILFEKME 148
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G D +T+N L+ G + K +E +KLL +M + P++ S V+ L +++
Sbjct: 149 ENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAISCNIVIDMLRKDEKYQ 208
Query: 321 EAKELVGRMI 330
E +L+ R +
Sbjct: 209 ECLDLLPRFL 218
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 70/141 (49%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PN TY TL+ GL + G V +A L +++ GI AD+ + I + GL K G + E M+
Sbjct: 14 PNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLCKNGCLYEAMEH 73
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
++K + SY ++ GL + A EL ++ E + V+Y +IHG C
Sbjct: 74 FNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCK 133
Query: 351 QKLVEDVDWVLKKMVQQGFVP 371
V+ + + +KM + G P
Sbjct: 134 VGQVDKANILFEKMEENGCTP 154
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+Y ++G +A LL GL + G + A + + Y + GLC
Sbjct: 3 LYNEMLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLC 62
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ G + EA +++S I D ++N LI GL K GK+E +L E++ +G +
Sbjct: 63 KNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVV 122
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y +++G + +A L +M +P ++Y L+ G C ++V +L KM
Sbjct: 123 TYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKM 182
Query: 365 VQQGFVP 371
+Q+ P
Sbjct: 183 IQRDMSP 189
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 154/323 (47%), Gaps = 9/323 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+S T VL+ ++ P + + S K ++ E + L++ L +A+ + + +
Sbjct: 66 ISRTTVLQTLRLIKVPADGLRFFDWVSN-KGFSHKEQSFFLMLEFLGRARNLNVARNFLF 124
Query: 116 RI--KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
I + + D +F ++I+ YGN AG ++++ M PSV TFN +L++L
Sbjct: 125 SIERRSNGCVKLQDRYFNSLIRSYGN-AGLFQESVKLFQTMKQMGISPSVLTFNSLLSIL 183
Query: 174 VSAKLYGEIQGIYTSAAKL-GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
+ G ++ + GV D+ N L+ G C+N ++ AF + + +C P+
Sbjct: 184 LKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPD 243
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA--DTVTFNILISGLRKQGKVEEGMKL 290
V TY+T++ GLC G V+ A +L M + D + V++ L+ G + +++E + +
Sbjct: 244 VVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLV 303
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV--GRMICERMSPSFVSYKKLIHGL 348
M +G PN+ +Y ++ GL + R+ E K+++ G +P ++ LI
Sbjct: 304 FHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAH 363
Query: 349 CNQKLVEDVDWVLKKMVQQGFVP 371
C+ ++ V ++M+ P
Sbjct: 364 CDAGHLDAAMKVFQEMLNMKLHP 386
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L++ G + + + + P+V T+++L+ L ++G A L + M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 261 -SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ G+ D+ TFN LI+G K V+E ++ + M+ C P+ +Y ++ GL +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 320 PEAKELVGRMI--CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
A ++ M+ + P+ VSY L+ G C ++ +++ V M+ +G P +
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 378 EIV 380
++
Sbjct: 321 TLI 323
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 131/300 (43%), Gaps = 11/300 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I L++A R+D I+DI+ D +N++ AG + A+
Sbjct: 314 PNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAM 373
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI--DAC-----CL 201
+ +M + P ++++++ L + + ++ + V + D C
Sbjct: 374 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 433
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N + + LC NG + A V + K+ + + +Y TL+ G C +G + A+ LL M
Sbjct: 434 NPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLR 492
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
D T+ +LI GL K G+ L+RM P + ++ VL L +K E
Sbjct: 493 REFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANE 552
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ LV M+ +R+ + +++ L + E +++ + G++ +M E++G
Sbjct: 553 SFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKM---EELLG 609
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 147/305 (48%), Gaps = 10/305 (3%)
Query: 81 YSKRKDYN--PNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIK 135
Y + D N PN +YT +I + R + I + M R+ + + V K
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFK 561
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
AG I K ++ + P +++ ++++ LV A E ++ + + G
Sbjct: 562 -----AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCV 616
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+D N ++ G C++G + A+ +L+E + EP V TY +++ GL + ++EA+ L
Sbjct: 617 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYML 676
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
E +S+GI+ + V ++ LI G K G+++E ++E + KG PN ++ +L L+
Sbjct: 677 FEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 736
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
+ EA M + +P++++Y LIHGLC + ++M +QGF P +
Sbjct: 737 AEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFT 796
Query: 376 WREIV 380
+ ++
Sbjct: 797 YTTMI 801
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 2/288 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +++++L +A+R D I + + K CR + ++I+ G GR+ +A
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLD-HKTCRPDAVTYCSLIEGLGRH-GRVDEAY 499
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M N P+ + ++ + IY +LG D LN + +
Sbjct: 500 KLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCV 559
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G +E + E P+ R+Y+ L+HGL + G EA+ L M+ +G DT
Sbjct: 560 FKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+N +I G K GKV + +LLE MK KG P +Y V+ GL R EA L
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ + + V Y LI G +++ ++++++Q+G P + W
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 727
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-- 140
K K + P Y +I+ LA+ R D + + K S G NV+ IY ++
Sbjct: 646 KTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK-------SKGIELNVV-IYSSLID 697
Query: 141 ----AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
GRI +A + ++ P+V T+N +L+ LV A+ E + S L
Sbjct: 698 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTP 757
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ +IL+ GLC+ AF E KQ +PNV TY+T++ GL + GN+ EA L
Sbjct: 758 NYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLF 817
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD- 315
E+ + +G AD+ +N +I GL + + +L E + KGC + Y + LLD
Sbjct: 818 EKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGC----SIYTKTCVVLLDS 873
Query: 316 --KKRFPEAKELVGRMICE 332
K E +VG ++ E
Sbjct: 874 LHKAECIEQAAIVGAVLRE 892
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 147/327 (44%), Gaps = 8/327 (2%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
T ++++F+ + +S+L++ K P+ LY + I+ +A + D +K
Sbjct: 239 TTLIRVFAREGRVDAALSLLDEM-KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMK 297
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
L D + ++I + A R+++A+E M P +N ++ A
Sbjct: 298 ANGLV-LDDVTYTSMIGVLCK-ADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGK 355
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ + + + G N +L L G ++ A +E K++ PN+ TY+
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNI 414
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++ LC+ G +E A + + M+ G+ + +T NI++ L K ++++ + E + K
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKT 474
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL--CNQKLVED 356
C P++ +Y ++ GL R EA +L +M+ P+ V Y LI C +K ED
Sbjct: 475 CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRK--ED 532
Query: 357 VDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ +M++ G P + + + CV
Sbjct: 533 GHKIYNEMLRLGCSPDLLLLNTYMDCV 559
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 132/303 (43%), Gaps = 3/303 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L + +RK P+ Y I++ L + + D + +K + + S YN++
Sbjct: 362 LLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLST---YNIMIDM 418
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
AG++ A+ M +P+V T N++++ L A+ + I+ D
Sbjct: 419 LCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPD 478
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A L++GL +G ++ A+ + ++ N PN Y++L+ + G E+ +
Sbjct: 479 AVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYN 538
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M G D + N + + K G++E+G L + +K G P++ SY +++GL+
Sbjct: 539 EMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAG 598
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
EA EL M + +Y +I G C V +L++M +G P + +
Sbjct: 599 FAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYG 658
Query: 378 EIV 380
++
Sbjct: 659 SVI 661
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/322 (19%), Positives = 141/322 (43%), Gaps = 7/322 (2%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
+P V+ + L+D + ++ + D Y ++ +A+ ++F+ +E I++
Sbjct: 96 NPELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEE 155
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+ + ++ V+ + ++ +A + M P+ + ++ L ++
Sbjct: 156 MSIAGFGPSNNTCIEIVLSFIKSR--KLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTS 213
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ + ++ +LG ++ L++ G ++AA +LDE + EP+V Y
Sbjct: 214 RDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLY 273
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+ + + G V+ A+ M++ G+ D VT+ +I L K ++ E ++L E M
Sbjct: 274 NVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQ 333
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
P + +Y ++ G +F +A L+ R + PS VSY ++ L +
Sbjct: 334 NKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKG---Q 390
Query: 357 VDWVLKKM--VQQGFVPRMGMW 376
VD LKK +++ +P + +
Sbjct: 391 VDEALKKFEEMKKDAIPNLSTY 412
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
NV ++TL+ +G V+ A LL+ M+S ++ D V +N+ I K GKV+ K
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFF 293
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
MK G + +Y ++ L R EA EL M + P +Y +I G
Sbjct: 294 HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMA 353
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
ED +L++ ++G +P + + I+ C+
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 127/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFCKEGEIRLA-QSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ L+ A + DE PN +++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K G +++ L+ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ C+ G + A V D K P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ E F L M++ G+ D T+++LI+GL K+ K+++ +L + M G PNS S+
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC ++ ++ +M +
Sbjct: 246 TLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 134/272 (49%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G +++ M +
Sbjct: 153 RLAQS-VFDAITKWGLRPSVVSFNTLMNGY----IKL-----GDLNEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ ++ L+ G C++G ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+ G++++A L+ M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V ++K+M + G+VP
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLMKEMQRDGYVP 414
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+NG+L+ A +++E + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 19/247 (7%)
Query: 72 ISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIMQR 116
+S +++N Y K D N P+ Y+++IN L + + D ++
Sbjct: 172 VSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDE 231
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
+ L S F I G+ GR+ A+E M S + P + T+N ++ L
Sbjct: 232 MLDNGLVPNSVSF---TTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ Q + + G++ D L+ G C+ G+LE AF K+N +
Sbjct: 289 NGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y+ L+ GLC++G +A +L M S G+ + T+ ++I+ K+G V G KL++ M+
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 408
Query: 296 GKGCYPN 302
G P+
Sbjct: 409 RDGYVPS 415
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 127/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
GV+ D ++L+ GLC+ ++ A + DE PN T++TL+ G C+ G
Sbjct: 196 XMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L + M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VJ L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VJEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ + G + A V D K P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M++ G+ D T+++LI+GL K+ K+++ +L + M G PN ++
Sbjct: 186 DLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ + +M +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQS-VFDAITKWGLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNXMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L + M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G+VP
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K G+ N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M G+ + VTF LI G
Sbjct: 192 RLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + P+ +Y ++YGL K +A++L M + + P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKE 340
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A + DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV--PNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ GLC++G +A +L M S G+ +
Sbjct: 321 SCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
T+ ++I+ K+G V G KLL+ M+ G P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 12/250 (4%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYTSAAKL 192
M RIS+A M C P+ T+ ++ N+ ++ KL+ E+ A++
Sbjct: 173 MEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEM---LNDASQY 229
Query: 193 GVEIDACCL--NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
GV + +I++ GLC+ G + A + +E Q P+V +YSTL+HG C G +
Sbjct: 230 GVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWD 289
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
++ L + M +G+ D VTF++LI L K+GKV E KLLE M +G PN +Y ++
Sbjct: 290 QSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLI 349
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
G A+EL M + + P +SY LI+G C V++ + +M+Q G
Sbjct: 350 DGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKS 409
Query: 371 PRMGMWREIV 380
P + + ++
Sbjct: 410 PNVTTYGTLL 419
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 118/226 (52%), Gaps = 1/226 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A+ +M P+V T+ +L L G+ + ++ GV ++
Sbjct: 392 KVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYG 451
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I L GLC+N L A + +E N + N+ YS L+ GLC+ G +E A+ L E++ E
Sbjct: 452 IFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQE 511
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D VT+NI+I G K G+V+ L E+M+ GC P+ +Y +L G + + E
Sbjct: 512 GLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEV 571
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVDWVLKKMVQQ 367
+L+ +M+ + +SP+ S ++ LC ++K + VD + K VQ+
Sbjct: 572 IKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQR 617
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 103/226 (45%), Gaps = 6/226 (2%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + +FN +L L Y ++ +Y G+ D L+IL LC + A
Sbjct: 89 PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ ++ PNV TY+TL+ GLC + + EA L RM+ G + VT+ LI GL +
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208
Query: 281 QGKVEEGMKLLERM------KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
G V +KL + M G C P +Y ++ GL R EAKEL M + M
Sbjct: 209 TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGM 268
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P +SY LIHG C + + +MV QG P M + ++
Sbjct: 269 IPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLI 314
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 113/235 (48%), Gaps = 6/235 (2%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+S+A+ + + P+V T+ ++ L E ++ KLG +A
Sbjct: 141 RVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYG 200
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQ------NCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
L+KGLC+ GN+ A + E NC+P V TYS ++ GLC+ G +EA L
Sbjct: 201 TLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELF 260
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E M+++G+ D ++++ LI G GK ++ L + M +G P+ ++ ++ L +
Sbjct: 261 EEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKE 320
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ EAK+L+ MI + P+ ++Y LI G C + + M +G P
Sbjct: 321 GKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEP 375
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 142/309 (45%), Gaps = 6/309 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P Y++II+ L + R D +++ + +K + + D Y+ + I+G AG+ ++
Sbjct: 235 PGVITYSIIIDGLCKVGREDEAKELFEEMKAQGM--IPDVISYSTL-IHGFCCAGKWDQS 291
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M P + TF+++++ L E + + + G+ + N L+ G
Sbjct: 292 KHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDG 351
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C G+L +A + P + EP+ +Y+TL++G C+ V+EA L M G +
Sbjct: 352 FCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPN 411
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+ L+ GL ++GKV + KL MK G NS Y L GL EA EL
Sbjct: 412 VTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFN 471
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
+ + +Y LI GLC +E + +K+ Q+G P + + ++ G G
Sbjct: 472 ELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVG 531
Query: 387 K-DNRNRVY 394
+ DN N ++
Sbjct: 532 QVDNANILF 540
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 115/239 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++++A + L M P++ T+N +++ + ++ S G+E D
Sbjct: 321 GKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISY 380
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G C+ ++ A + +E + PNV TY TL+ GL +KG V +A L M++
Sbjct: 381 TTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKT 440
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ A++ + I + GL K + E M+L +K N +Y ++ GL +
Sbjct: 441 YGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLET 500
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A EL ++ E + P V+Y +IHG C V++ + + +KM + G P + + ++
Sbjct: 501 AWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLL 559
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 136/316 (43%), Gaps = 22/316 (6%)
Query: 89 PNEALYTLIIN------KLAQAKRFDAIEDIMQRIKVEKLCRFS---DGFFYNVIKIYGN 139
P+ ++++I+ K+ +AK+ +E ++QR V L ++ DGF
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKL--LEVMIQRGIVPNLITYNSLIDGFC--------- 353
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
M G ++ A E MPS P ++ ++N E +Y ++G +
Sbjct: 354 MVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVT 413
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
LLKGL + G + A + N + Y + GLC+ + EA L +
Sbjct: 414 TYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNEL 473
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+S + ++ LI GL K GK+E +L E++ +G P+ +Y +++G +
Sbjct: 474 KSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQV 533
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A L +M +P ++Y L+ G C +E+V +L KMVQ+ P +
Sbjct: 534 DNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIV 593
Query: 380 VGCVTFGKDNRNRVYV 395
V + KD + + +V
Sbjct: 594 VDMLC--KDEKYKKFV 607
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 128/263 (48%), Gaps = 30/263 (11%)
Query: 85 KDYNPNEALYTLIINKLAQA-KRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM--- 140
K P+E YT +IN + K +A+ + ++V K + YG +
Sbjct: 371 KGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPN---------VTTYGTLLKG 421
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQGIYTSAA 190
G++ A + M +Y + + + + L+ L + +L+ E++ +
Sbjct: 422 LFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELK---SYNF 478
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
KL +E +C L+ GLC+ G LE A+ + ++ ++ +P+V TY+ ++HG C+ G V+
Sbjct: 479 KLNIENYSC----LIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVD 534
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A L E+ME G D + +N L+ G + K+EE +KLL +M K PN+AS V+
Sbjct: 535 NANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594
Query: 311 YGLLDKKRFPEAKELVGRMICER 333
L +++ + +L+ + +R
Sbjct: 595 DMLCKDEKYKKFVDLLPKFPVQR 617
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 209 CENGNLEA--AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
C+ GN+ A AF+ D + + P + +++ L+ GL + + + F L M G+
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T +IL + L +V E + + + +G PN +Y ++ GL + R EA L
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184
Query: 327 GRMICERMSPSFVSYKKLIHGLC 349
RM +P+ V+Y LI GLC
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLC 207
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 152/343 (44%), Gaps = 55/343 (16%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
LS T VL+ +R P + ++ + K + NE Y L+I L +++ +A + +
Sbjct: 93 LSKTTVLQTLQLIRTPAKALHFF-RWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVF 151
Query: 116 RI--KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
I K + D FF ++I+ YG AG ++I+ M PSV TFN +L+++
Sbjct: 152 SIEKKSGGAVKLGDRFFNSLIRSYG-WAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIV 210
Query: 174 V-------SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
+ + +L+ E+ Y GV D NIL++G C N ++ F+ E +
Sbjct: 211 LKRGRTSMAKQLFDEMLDTY------GVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSR 264
Query: 227 QNCEP-------------------------------------NVRTYSTLMHGLCEKGNV 249
C+P NV TY+TL+ G C K ++
Sbjct: 265 FKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDM 324
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY-PNSASYQE 308
EA LL M S G+ + +T+N LI GL + K+++ ++LE M G G + P++ +
Sbjct: 325 AEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNT 384
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
++ + EA + +M R+ P +Y L+ LC +
Sbjct: 385 LIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQR 427
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 29/298 (9%)
Query: 56 LSP-----TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
LSP T +++ + +D +S+L + R PN+ Y +I L +A++ D I
Sbjct: 304 LSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSR-GLKPNKITYNTLIQGLCEAQKLDKI 362
Query: 111 EDIMQRIKVEKLCRFSDGFFY-------NVIKIYGNMAGRISKAIETLFDMPSYNCWPSV 163
++I++ + DG F +IK + M G++ +A M P
Sbjct: 363 KEILEGM-------VGDGGFIPDTCTLNTLIKAHCTM-GKLEEAFSVFEKMSELRVQPDS 414
Query: 164 KTFNLVLNLLVSAKLYGEIQGIYTSAAK-------LGVEIDACCLNILLKGLCENGNLEA 216
T+++++ L + + + A+ +G + N + + LC NG +
Sbjct: 415 ATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKK 474
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A V + K+ + + +Y TL+ G C +G E F LL M D T+ ++I
Sbjct: 475 AERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMID 533
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
GL K+G K LE+M P +A + +L L++K E+ LV M+ R+
Sbjct: 534 GLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRI 591
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 136/299 (45%), Gaps = 25/299 (8%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKV----EKLCRFSDGFFYNVIKIYGNMA-------- 141
YT++++ L ++ R D ++ ++V L +S G I++Y M
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNS 472
Query: 142 -------------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
G IS+A + + + +N++++ GE Y
Sbjct: 473 FVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQ 532
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ G+ N L+ G C+ G L A +LD P TY+TLM+G CE+G+
Sbjct: 533 IIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGD 592
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ F +L ME++ I +T+ +++ GL K+G++ E ++LL+ M +G +P+ +Y
Sbjct: 593 MHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNT 652
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
V+ +A +L +M+ + PS V+Y LI+GLC ++D D +L + Q
Sbjct: 653 VIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQ 711
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 126/257 (49%), Gaps = 14/257 (5%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D + YN++ +AG + +A+E DM ++ P + T+N++ N ++ G I G +
Sbjct: 304 DVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILAN---GFRILGLISGAW 360
Query: 187 TSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
++ G+ D IL+ G C+ GN+E +F + ++ Q + ++ TY+ L+ L
Sbjct: 361 KVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSL 420
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C+ G ++EA LL ME G+ D +T++ +G VEE ++L E M K YPNS
Sbjct: 421 CKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSKRIYPNS 472
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
++ GL +K EA+ + ++ + Y +I G + + K+
Sbjct: 473 FVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQ 532
Query: 364 MVQQGFVPRMGMWREIV 380
++++G P + + ++
Sbjct: 533 IIEKGISPTIVTFNSLI 549
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C+ G+++ A K P+V +Y+ L+HGLC G++EEA ME
Sbjct: 273 FNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDME 332
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G++ D VT+NIL +G R G + K+++RM G P+ +Y ++ G
Sbjct: 333 NHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIE 392
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
E+ +L +M+ + + S V+Y L+ LC +++ +L +M G P +
Sbjct: 393 ESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDL 445
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A+ L + PSV +FN +++ + + K G+ D N
Sbjct: 250 RLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYN 309
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
ILL GLC G++E A ++ EP++ TY+ L +G G + A+ +++RM
Sbjct: 310 ILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLN 369
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G++ D VT+ ILI G + G +EE KL E+M +G + +Y +L L R EA
Sbjct: 370 GLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEA 429
Query: 323 KELVGRMICERMSPSFVSYKK 343
L+ M + P ++Y +
Sbjct: 430 VILLHEMEVIGLKPDLLTYSR 450
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 3/229 (1%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A + A+ L M N S+ T+N +LL + + + +Y GV +
Sbjct: 181 AEMVHDALFVLAKMKVLNLQVSIATYN---SLLYNLRHTDIMWDVYNEIKASGVPQNEYT 237
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
IL+ GLC L+ A L E + P+V +++ LM G C+ G+V+ A M
Sbjct: 238 NPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMI 297
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ D ++NIL+ GL G +EE ++ M+ G P+ +Y + G
Sbjct: 298 KYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLIS 357
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A ++V RM+ ++P V+Y LI G C +E+ + +KM+ QG
Sbjct: 358 GAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 115/242 (47%), Gaps = 4/242 (1%)
Query: 130 FYNV-IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYT 187
YN+ I Y + G I +A+ + + P++ TFN L+ KL ++ + T
Sbjct: 509 LYNIMIDGYAKL-GNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT 567
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
G+ + L+ G CE G++ + F +L E + +P TY+ ++ GLC++G
Sbjct: 568 IKVH-GLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEG 626
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+ E+ LL+ M + G+ D +T+N +I K +++ +L +M P+ +Y
Sbjct: 627 RLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYN 686
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ GL +A L+ + + + + V+Y +I C + V++ +MV++
Sbjct: 687 VLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVER 746
Query: 368 GF 369
GF
Sbjct: 747 GF 748
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 105/231 (45%), Gaps = 2/231 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++++A++ L + + P+ T+ ++N ++ ++ AK ++
Sbjct: 556 GKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAK-AIKPTQIT 614
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+++KGLC+ G L + +L + P+ TY+T++ C+ ++++AF L +M
Sbjct: 615 YTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQML 674
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ VT+N+LI+GL G +++ +LL ++ + +Y ++ K
Sbjct: 675 QHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQ 734
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A +M+ S Y +I+ LC + L+ D + M+ G P
Sbjct: 735 NALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPP 785
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%)
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
V +E N T L+ GLC + +++A L E V+FN L+SG
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K G V+ M G P+ SY +L+GL EA E M + P V
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIV 341
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+Y L +G L+ V+++M+ G P +
Sbjct: 342 TYNILANGFRILGLISGAWKVVQRMLLNGLNPDL 375
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 89/214 (41%), Gaps = 2/214 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P YT ++N + ++ D++ ++ + + Y V+ GR+ +++
Sbjct: 575 PTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIK--PTQITYTVVVKGLCKEGRLHESV 632
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L M + +P T+N V+ A + ++ + ++ N+L+ GL
Sbjct: 633 QLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 692
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C GNL+ A +L Q+ Y+T++ C KG+V+ A +M G +
Sbjct: 693 CVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSI 752
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
++ +I+ L K+ + + M G P+
Sbjct: 753 RDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPD 786
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 92/220 (41%), Gaps = 8/220 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P + YT+++ L + R +++ + L F D YN + A +
Sbjct: 606 KAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGL--FPDQITYNTVIQSFCKAHDL 663
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDACCL 201
KA + M ++ PS T+N+++N L +YG ++ + + + +
Sbjct: 664 QKAFQLHNQMLQHSLQPSPVTYNVLINGLC---VYGNLKDADRLLVTLQDQSIRLTKVAY 720
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++K C G+++ A + ++ E ++R YS +++ LC++ + +A M +
Sbjct: 721 TTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLT 780
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GI D ++++ + G ++ M G P
Sbjct: 781 HGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820
>gi|334184790|ref|NP_181376.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546769|sp|Q8L6Y7.2|PP193_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g38420, mitochondrial; Flags: Precursor
gi|3395430|gb|AAC28762.1| hypothetical protein [Arabidopsis thaliana]
gi|330254441|gb|AEC09535.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 146/307 (47%), Gaps = 12/307 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P Y +I LA++ + + I ++ ++V + + F +VI YG +GRI +AI
Sbjct: 70 PTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYG-FSGRIEEAI 128
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE-IQGIYTSAAKLGVEIDACCLNILLKG 207
E F +P++ C PS T N +L +LV + E + I A ++GV ++ IL+
Sbjct: 129 EVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDA 188
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE--EAFGLLERME----S 261
LC G ++ A ++ + + + R YS L+ +C+ + + G LE + S
Sbjct: 189 LCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFS 248
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ TV L+ G G+ +E + +L +MK P+ Y VL G++ + +P+
Sbjct: 249 PGLRDYTVVMRFLVEG----GRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPK 304
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A +L ++ ++P +Y I+GLC Q +E ++ M + G P + + ++
Sbjct: 305 ADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIK 364
Query: 382 CVTFGKD 388
+ D
Sbjct: 365 ALVKAGD 371
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 116/239 (48%), Gaps = 2/239 (0%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-YNVIKIYGNMAGRISKAIETL 151
LY+ +++ + + K D++ ++ + RFS G Y V+ + GR + + L
Sbjct: 216 LYSRLLSSVCKHKDSSCF-DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVL 274
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
M P + + +VL +++ + Y + ++ LG+ D N+ + GLC+
Sbjct: 275 NQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQ 334
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
++E A ++ K EPNV TY+ L+ L + G++ A L + ME+ G++ ++ TF
Sbjct: 335 NDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTF 394
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+I+IS + +V LLE + S+ +EV+ L +K +A EL+ ++
Sbjct: 395 DIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-SEGIDA 266
L ++ N +L F NCEP + Y ++ L + +E +L +E SE D
Sbjct: 47 LTDSENASVMRTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDT 106
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
F +I+ G++EE +++ ++ C P++ + +L L+ K+ ++ ELV
Sbjct: 107 PESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKR---QSLELV 163
Query: 327 GRMICE--RMSPSF--VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
++ + RM ++ LI LC V+ +++ M Q + ++ ++
Sbjct: 164 PEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSS 223
Query: 383 VTFGKDN 389
V KD+
Sbjct: 224 VCKHKDS 230
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + ++ PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + + M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ + G + A V D K + P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M++ G+ D T+++LI+GL K+ K+++ +L + M G PN ++
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ M+ + +SP ++Y LI+GLC + ++ ++ +M +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQS-VFDAITKWSLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G++P
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 108/209 (51%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K + N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ + M + P+ +Y ++YGL K +A++L+ M + + P
Sbjct: 252 CKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C++G++E AF
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+RM E I D V + LISGL ++G+ + K+L M G P +Y ++ K
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKK 394
Query: 317 KRFPEAKELVGRMICERMSPSFVS 340
+L+ M + PS V+
Sbjct: 395 GDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV--PNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ GLC++G +A +L M S G+ +
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
T+ ++I+ K+G V G KLL+ M+ G P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 152/343 (44%), Gaps = 55/343 (16%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
LS T VL+ +R P + ++ + K + NE Y L+I L +++ +A + +
Sbjct: 93 LSKTTVLQTLQLIRTPAKALHFF-RWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVF 151
Query: 116 RI--KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
I K + D FF ++I+ YG AG ++I+ M PSV TFN +L+++
Sbjct: 152 SIEKKSGGAVKLGDRFFNSLIRSYG-WAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIV 210
Query: 174 V-------SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
+ + +L+ E+ Y GV D NIL++G C N ++ F+ E +
Sbjct: 211 LKRGRTSMAKQLFDEMLDTY------GVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSR 264
Query: 227 QNCEP-------------------------------------NVRTYSTLMHGLCEKGNV 249
C+P NV TY+TL+ G C K ++
Sbjct: 265 FKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDM 324
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY-PNSASYQE 308
EA LL M S G+ + +T+N LI GL + K+++ ++LE M G G + P++ +
Sbjct: 325 AEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNT 384
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
++ + EA + +M R+ P +Y L+ LC +
Sbjct: 385 LIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQR 427
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 142/324 (43%), Gaps = 34/324 (10%)
Query: 56 LSP-----TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
LSP T +++ + +D +S+L + R PN+ Y +I L +A++ D I
Sbjct: 304 LSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSR-GLKPNKITYNTLIQGLCEAQKLDKI 362
Query: 111 EDIMQRIKVEKLCRFSDGFFY-------NVIKIYGNMAGRISKAIETLFDMPSYNCWPSV 163
++I++ + DG F +IK + M G++ +A M P
Sbjct: 363 KEILEGM-------VGDGGFIPDTCTLNTLIKAHCTM-GKLEEAFSVFEKMSELRVQPDS 414
Query: 164 KTFNLVLNLLVSAKLYGEIQGIYTSAAK-------LGVEIDACCLNILLKGLCENGNLEA 216
T+++++ L + + + A+ +G + N + + LC NG +
Sbjct: 415 ATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKK 474
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A V + K+ + + +Y TL+ G C +G E F LL M D T+ ++I
Sbjct: 475 AERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMID 533
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
GL K+G K LE+M P +A + +L L++K E+ LV M+ R+
Sbjct: 534 GLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQ 593
Query: 337 ----SFVSYKKLIHGLC-NQKLVE 355
S + ++L+ LC ++KL+E
Sbjct: 594 NIDLSTHTMEELVSFLCQSRKLLE 617
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 66 SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 125
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 185
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M + P + ++
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLI 305
Query: 381 -GCVTFG 386
GC G
Sbjct: 306 DGCCKEG 312
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 6/246 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 124 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 180
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 240
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M K P+ +
Sbjct: 241 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKIT 300
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 301 YTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREML 360
Query: 366 QQGFVP 371
G P
Sbjct: 361 NVGLKP 366
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S+ FN++++ Q ++ + K G+ N L+ G G+L+ F +
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 181
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
+P+V TYS L++GLC++ +++A L + M +G+ + VTF LI G K
Sbjct: 182 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 241
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G+V+ M++ ++M + P+ +Y ++YGL K +A L+ M + + P ++Y
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITY 301
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQ 367
LI G C + ++ K+M+Q+
Sbjct: 302 TTLIDGCCKEGDLDSAFEHRKRMIQE 327
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 110/211 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 191 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 250
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M + + D +T+ LI G K
Sbjct: 251 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCK 310
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 311 EGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRT 370
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 371 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 401
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 190 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL--VPNGVTFTTLIDGHCKNGRVDLA 247
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 248 MEIYKQMLSQSLSPDLITYN-----------------------------------TLIYG 272
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ A +++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 273 LCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLD 332
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G P+S +Y ++ K + +L+
Sbjct: 333 EVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLK 392
Query: 328 RMICERMSPSFVSYKKLIHG 347
M + PS V+Y L++G
Sbjct: 393 EMQRDGHVPSVVTYNVLMNG 412
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A L +M S NC P+ T N++L+ L E + + + G +D
Sbjct: 410 GKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTC 469
Query: 202 NILLKGLCENGNLEAAFYVL-----------------------DEFPKQNCEPNVRTYST 238
NI++ LC NG L+ A ++ D + C P++ TYST
Sbjct: 470 NIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYST 529
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++ GLC+ G +++A M S+G+ D+ ++ I ++GK+ ++L+ M+ +G
Sbjct: 530 IISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRG 589
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C +Y ++ GL K + E L+ M + +SP +Y +++ LC + D
Sbjct: 590 CNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAP 649
Query: 359 WVLKKMVQQGFVPRMGMWREIV 380
VL +M+Q+G P + +R ++
Sbjct: 650 SVLDEMLQKGISPNISSFRILI 671
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 14/303 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN LY +I+ + + E ++ +++ + L + F + + G +G+I +A
Sbjct: 215 PNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCG--SGKILEAS 272
Query: 149 ETLFDM--------PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
DM P P+V T+ L+L + E + + + + I+
Sbjct: 273 RIFRDMQIDEELGLPH----PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLES 328
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI L GL NG L A+ VL E EP++ +Y+ +M GLC+ G + +A L+ M
Sbjct: 329 YNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMI 388
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI DTVT++ L+ G +GKV E LL M C PN+ + +L+ L + R
Sbjct: 389 RNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRIS 448
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA+ L+ +M + V+ +I+ LCN ++ ++ M G + +
Sbjct: 449 EAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFI 508
Query: 381 GCV 383
G V
Sbjct: 509 GLV 511
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 7/270 (2%)
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY--N 158
L ++K F+ ++D+ Q + SD N++ + +G +KAI + S
Sbjct: 49 LIRSKMFNELDDLHQLLLNSPSLESSDSSLENLVTVLAK-SGFFNKAISHFKSLRSNFPE 107
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
PS+ +N++L + + +Y V +A N+L+ LC++G+LE A
Sbjct: 108 KQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAR 167
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ D+ P + CEPN T+ L+ G C G + LL +M + GI + V +N LIS
Sbjct: 168 ELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSF 227
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM-ICERMS-- 335
K+GK + KL+++M+ G P+ ++ + L + EA + M I E +
Sbjct: 228 CKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLP 287
Query: 336 -PSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
P+ ++YK ++ G C + ++E+ ++ M
Sbjct: 288 HPNVITYKLMLMGFCKEGMLEEAKTLVDTM 317
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 143/339 (42%), Gaps = 59/339 (17%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQR--------------IKVEKLCRFSDGFFYNV 133
+PN ++++ L + R E+++Q+ I + LC ++G
Sbjct: 428 SPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALC--NNGQLDKA 485
Query: 134 IKIYGNMAGRISKAIETLFD---------MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
I+I M S A+ L + + C P + T++ +++ L A + +
Sbjct: 486 IEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKK 545
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ G++ D+ + + C G + +AF VL + K+ C ++TY++L+ GL
Sbjct: 546 KFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLG 605
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
K + E +GL++ M +G+ D T+N +++ L + G++ + +L+ M KG PN +
Sbjct: 606 SKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNIS 665
Query: 305 SY-----------------------------QEVLYGLLDKK-----RFPEAKELVGRMI 330
S+ +E LY L+ + + EAKEL +
Sbjct: 666 SFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETAL 725
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
YK LI LC + +E VL +++ +G+
Sbjct: 726 DRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGY 764
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 114/295 (38%), Gaps = 42/295 (14%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI---MQRIKVEKLCRFSDGF 129
S I +++ K P+ Y+ II+ L +A R D + M ++ D F
Sbjct: 506 SFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTF 565
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
++ + G+IS A + L DM C +++T+N ++ L S E+ G+
Sbjct: 566 IHSFCR-----EGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEM 620
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK--- 246
+ GV D C N +L LCE G + A VLDE ++ PN+ ++ L+ C+
Sbjct: 621 REKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDF 680
Query: 247 -------------------------------GNVEEAFGLLERMESEGIDADTVTFNILI 275
G V EA L E D + LI
Sbjct: 681 KASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLI 740
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
L K K+E +L R+ KG + AS+ V+ G A EL RM+
Sbjct: 741 DRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMM 795
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283
FP++ +P++ Y+ L+ + VE L + M + + TFN+LI L G
Sbjct: 105 FPEK--QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGH 162
Query: 284 VEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKK 343
+E+ +L ++M +GC PN ++ ++ G + EL+G+M + P+ V Y
Sbjct: 163 LEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNT 222
Query: 344 LIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
LI C + D + ++ KM + G VP +
Sbjct: 223 LISSFCKEGKTHDAEKLVDKMREDGLVPHV 252
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 85 SGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 144
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 145 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+G K+ K ++ +L + M KG PN + ++ G R
Sbjct: 205 ASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVD 264
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 324
Query: 381 -GCVTFG 386
GC G
Sbjct: 325 DGCCKEG 331
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 127/255 (49%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 143 YFFNILMHRFCKDGDIRJA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 199
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ G C+ + A + DE + PN ++TL+ G C+
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCK 259
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 260 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKIT 319
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A E RMI E V Y LI GLC + D + +L++M+
Sbjct: 320 YTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREML 379
Query: 366 QQGFVPRMGMWREIV 380
G P + I+
Sbjct: 380 SVGLKPDARTYTMII 394
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 109/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N + ++ G+ + L+ G C+NG ++ A +
Sbjct: 210 PDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEI 269
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G K
Sbjct: 270 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCK 329
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + Y ++ GL + R +A++++ M+ + P +
Sbjct: 330 EGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDART 389
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A +++DE + +P+ TY+TL+ G C
Sbjct: 269 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCC 328
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G+++ AF +RM E D V + LISGL +G+ + K+L M G P++
Sbjct: 329 KEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDAR 388
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+Y ++ K + +L+ M + PS V+Y L++G
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 13/284 (4%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIK-----VEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
+ L+I+ L++ D ++ +K V+ C F +I Y M G KA+
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYC------FCVLISAYAKM-GMAEKAV 147
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ-GIYTSAAKLGVEIDACCLNILLKG 207
E+ M ++C P V T+N++L +++ +++ + +Y K + IL+ G
Sbjct: 148 ESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDG 207
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L + G A + D+ + PN TY+ L+ GLC++G+ ++A L M++ G D
Sbjct: 208 LYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPD 267
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+V N L+ G K G++ E +LL + G Y ++ GL +R+ +A EL
Sbjct: 268 SVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + + P + Y LI GL +ED +L M +G P
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISP 371
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR S A + DM P+ T+ ++++ L + + ++ G D+
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAH 271
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL G C+ G + AF +L F K +R YS+L+ GL +AF L M
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ I D + + ILI GL K GK+E+ +KLL M KG P++ Y V+ L + E
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ L M P ++ LI +C LV + + + ++ + G P + + ++
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 146/343 (42%), Gaps = 44/343 (12%)
Query: 51 NHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
N+ D ++ +L F L + +L + K + Y+ +I+ L +A+R+
Sbjct: 264 NYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK-DGFVLGLRGYSSLIDGLFRARRYTQA 322
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
++ + + + D Y ++ + AG+I A++ L MPS P +N V+
Sbjct: 323 FELYANMLKKNIK--PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVI 380
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
L L E + + ++ DAC IL+ +C NG + A + E K C
Sbjct: 381 KALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCS 440
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERME------------------------------ 260
P+V T++ L+ GLC+ G ++EA LL +ME
Sbjct: 441 PSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILK 500
Query: 261 ---------SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
G D V++N+LI+G + G ++ +KLL ++ KG P+S +Y ++
Sbjct: 501 AYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLIN 560
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
GL R EA +L R SP+ Y+ L+ C ++ V
Sbjct: 561 GLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSCRKRKV 601
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 116/253 (45%), Gaps = 4/253 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN YT++I+ L Q D + ++ + D +N + GR+ +A
Sbjct: 230 SPNRVTYTILISGLCQRGSADDARKLFYEMQTSG--NYPDSVAHNALLDGFCKLGRMVEA 287
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L ++ ++ +++ L A+ Y + +Y + K ++ D IL++G
Sbjct: 288 FELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQG 347
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL-LERMESEGIDA 266
L + G +E A +L P + P+ Y+ ++ LC +G +EE L LE E+E
Sbjct: 348 LSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF-P 406
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T ILI + + G V E ++ ++ GC P+ A++ ++ GL EA+ L+
Sbjct: 407 DACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466
Query: 327 GRMICERMSPSFV 339
+M R + F+
Sbjct: 467 HKMEVGRPASLFL 479
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 144/399 (36%), Gaps = 112/399 (28%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK-----------------VEKLC--- 123
+K+ P+ LYT++I L++A + IED ++ + ++ LC
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGK---IEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Query: 124 ----------------RFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
F D + ++ G + +A E ++ C PSV TFN
Sbjct: 388 LLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFN 447
Query: 168 LVLNLLVS-------------------AKLY-----------------GEIQGIYTSAAK 191
+++ L A L+ G I Y A
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAH 507
Query: 192 L---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G D N+L+ G C G+++ A +L+ + P+ TY+TL++GL G
Sbjct: 508 FADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGR 567
Query: 249 VEEAFGLL----ERMESEGIDADTVT-----------FNILISGLRK------------- 280
EEAF L + S + +T FN+ + L+K
Sbjct: 568 EEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIE 627
Query: 281 ----QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
+G+ E ++ L + + Y L GL RF EA + + +++
Sbjct: 628 QCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILV 687
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF--VPRM 373
+ S KLIHGLC ++ ++ V + F +PR+
Sbjct: 688 TPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRV 726
>gi|147819559|emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera]
Length = 449
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 140/288 (48%), Gaps = 3/288 (1%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
S K + Y + LA+AK+F IEDI++ K ++ F +I +YG A
Sbjct: 161 SDSKRFRSRYGYYEKAVLTLAKAKKFSFIEDILEHQKQYNEIS-TEVFAVRLITLYGK-A 218
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACC 200
G A + +MP NC +V +FN +L+ V++K + +I G + + LG+ D
Sbjct: 219 GMFEHAHKLFDEMPKLNCERTVMSFNALLSACVNSKKFDKIDGFFQELPRNLGIVPDVVS 278
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ CE G+L++A VLDE K EP++ T++TL++ + G+ + + + M+
Sbjct: 279 YNILVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNVFYQSGSNADGEKIWDLMK 338
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ + ++N + G+ + ++ E + L++ MK G P+ + ++ G +
Sbjct: 339 KNNVAPNVRSYNAKLRGVISENRMSEAVNLIDEMKTSGIKPDVFTLNSLMKGFCNAGNLE 398
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
EAK + + P +Y +LI L + E + K++ Q+
Sbjct: 399 EAKRWHSEIAINELPPVRATYMRLIPFLVEKDDFEMATELCKEVFQKA 446
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 154/326 (47%), Gaps = 25/326 (7%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ + ++ F +L SVL + K Y PN T+I+N L + +
Sbjct: 44 DLVTLSILINCFCHLGQMAFSFSVLGKILKL-GYQPN----TIILNTLMKG--------L 90
Query: 114 MQRIKVEKLCRFSD-----GFFYNVIKIYGNMAGRISK------AIETLFDMPSYNCWPS 162
+ +V+K F D GF + + YG + + K AI+ L + + P
Sbjct: 91 CLKGEVKKSLHFHDKVVAQGFQMDQVS-YGILLNGLCKIGETRCAIKLLRTIEDRSTRPD 149
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
V ++ +++ L KL E +Y+ G+ D L+ G C G L AF +L+
Sbjct: 150 VVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLN 209
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
E +N PN+ TY+TL+ LC++G V+E+ LL M +G+ D V ++IL+ G G
Sbjct: 210 EMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVG 269
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+V++ ++ M G P+ SY ++ GL KR EA L+ M+ + M P V+Y
Sbjct: 270 EVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYS 329
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQG 368
LI GLC + + + K+M +G
Sbjct: 330 SLIDGLCKLGRITTILDLTKEMHHRG 355
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 142/301 (47%), Gaps = 6/301 (1%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
R I ++ + S R P+ +Y+ II+ L + K D D+ + + F D
Sbjct: 132 RCAIKLLRTIEDRSTR----PDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGI--FPDV 185
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
Y + +AG++ +A L +M N P++ T+N +++ L E + +
Sbjct: 186 ITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAV 245
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
K GV+ D +IL+ G C G ++ A + + P+V +Y+ +++GLC+
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKR 305
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V+EA LL M + + DTVT++ LI GL K G++ + L + M +G N +Y
Sbjct: 306 VDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNS 365
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+L GL + +A L +M + P+ +Y LI GLC ++ + + ++ +G
Sbjct: 366 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKG 425
Query: 369 F 369
+
Sbjct: 426 Y 426
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 98/184 (53%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D + ++ GLC++ ++ A+ + E + P+V TY+TL+ G C G + EAFGLL
Sbjct: 149 DVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLL 208
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M + I+ + T+N LI L K+GKV+E LL M KG P+ Y ++ G
Sbjct: 209 NEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLV 268
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+AK++ M+ ++P SY +I+GLC K V++ +L++M+ + +P +
Sbjct: 269 GEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTY 328
Query: 377 REIV 380
++
Sbjct: 329 SSLI 332
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + F +L LV K Y + + G+ D L+IL+ C G + +F V
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K +PN +TLM GLC KG V+++ +++ ++G D V++ IL++GL K
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ +KLL ++ + P+ Y ++ GL K EA +L M + P ++
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI G C + + +L +M+ + P + + ++
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLI 227
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 4/225 (1%)
Query: 167 NLVLNLLVSAK-LYGEIQG---IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
++LN L+ L GE++ + G ++D ILL GLC+ G A +L
Sbjct: 80 TIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLR 139
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
++ P+V YST++ GLC+ V+EA+ L M + GI D +T+ LI G G
Sbjct: 140 TIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAG 199
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
++ E LL M K PN +Y ++ L + + E+K L+ M + + P V Y
Sbjct: 200 QLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYS 259
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
L+ G C V+ + MVQ G P + + I+ + GK
Sbjct: 260 ILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGK 304
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 136/287 (47%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K+ NPN Y +I+ L + + ++++ + +K + D Y+++ + G +
Sbjct: 214 KNINPNIYTYNTLIDTLCKEGKVKESKNLLA-VMTKKGVK-PDVVIYSILMDGYCLVGEV 271
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA + M P V ++N+++N L K E + + D + L
Sbjct: 272 QKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSL 331
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+ G + + E + N+ TY++L+ GLC+ N+++A L +M+ GI
Sbjct: 332 IDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGI 391
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ T+ LI GL K G++++G L + + KG + +Y ++ GL + F EA
Sbjct: 392 QPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALA 451
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +M P+ V+++ +I L + + + +L +M+ +G +P
Sbjct: 452 MKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 105/223 (47%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P + T ++++N + KLG + + LN L+KGLC G
Sbjct: 36 MEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGE 95
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ + + D+ Q + + +Y L++GLC+ G A LL +E D V ++
Sbjct: 96 VKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYST 155
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I GL K V+E L M +G +P+ +Y ++ G + EA L+ MI +
Sbjct: 156 IIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKN 215
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
++P+ +Y LI LC + V++ +L M ++G P + ++
Sbjct: 216 INPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIY 258
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 122/242 (50%), Gaps = 3/242 (1%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
F ++ +Y N + +AI+ M P + ++LN L +L + +Y
Sbjct: 133 FSWLVIVYANTKMK-QEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
A++GVE + N+L+ C++G++E A +L E + P++ TY+TL+ C+KG
Sbjct: 192 ARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMH 251
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EA + +RME EGI D VT+N LI G K+G++ E M+L + ++ PN +Y +
Sbjct: 252 YEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDAT--PNHVTYTTL 309
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ G +A L M + + P+ V+Y ++ LC + D + +L +M ++
Sbjct: 310 IDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKI 369
Query: 370 VP 371
P
Sbjct: 370 EP 371
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 168/388 (43%), Gaps = 61/388 (15%)
Query: 49 KLNHKDWLSPTEVLKIFSNLRDP-------ISVISVLNQYSKRKD-------------YN 88
K+ ++D+LS VL L D S + ++ +K K +
Sbjct: 103 KIAYRDFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFR 162
Query: 89 PNEALYTLIINKLAQAKRFDAIEDI---MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
P+ T+++N LA+ + D + + M RI VE ++ YNV+ +G +
Sbjct: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVE-----ANIHVYNVLIHACCKSGDVE 217
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KA L +M S +P + T+N +++L ++ E + + G++ D N L+
Sbjct: 218 KADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLI 277
Query: 206 KGLCENG---------------------------------NLEAAFYVLDEFPKQNCEPN 232
G C+ G +L+ A + +E Q P
Sbjct: 278 HGFCKEGRMREAMRLFKEIRDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPT 337
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
V TY++++ LCE G + +A LL M + I+ D VT N LI+ K G ++ +K+
Sbjct: 338 VVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKN 397
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
RM G + +Y+ +++G + AKEL+ M+ SPS+ +Y L+ G CNQ+
Sbjct: 398 RMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQ 457
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E V + + V++G ++R ++
Sbjct: 458 NEEAVLKLPDEFVRKGLCVDKSLYRALI 485
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 101/260 (38%), Gaps = 2/260 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+D PN YT +I+ + D + + ++ + L + YN I GRI
Sbjct: 297 RDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGL--YPTVVTYNSILRKLCEIGRI 354
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + L +M P T N ++N + + G+++D L
Sbjct: 355 RDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKAL 414
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C+ ++ A +L P+ TYS L+ G C + N E L + +G+
Sbjct: 415 IHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGL 474
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D + LI K+ +V+ K+ M+ KG +S Y + Y + A +
Sbjct: 475 CVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASD 534
Query: 325 LVGRMICERMSPSFVSYKKL 344
L+ M R+ + Y+ L
Sbjct: 535 LLDEMYKRRLMITLKIYRAL 554
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ A+ +M +PS+ F+ +L+ + + + + LG+ + +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
ILL C L A VL + K EP++ T S+L++G C + EA L+++M
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G DTVTFN LI GL K E + L++RM +GC P+ +Y V+ GL + A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ + V Y +I GLC K ++D + KM +G P + + ++ C
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300
Query: 383 V 383
+
Sbjct: 301 L 301
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 147/292 (50%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ ++ +++ +A+ +FD + + +++ + L + + Y+++ ++ A+
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQM--QNLGIPHNHYTYSILLNCFCRRSQLPLAL 136
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M P + T + +LN K E + ++G + D N L+ GL
Sbjct: 137 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGL 196
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ A ++D + C+P++ TY T+++GLC++G+++ A LL++ME I+A+
Sbjct: 197 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANV 256
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +N +I GL K +++ L +M+ KG P+ +Y ++ L + R+ +A L+
Sbjct: 257 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSD 316
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI +++P+ V++ LI + + + + + +M+Q+ P + + ++
Sbjct: 317 MIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 368
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 117/238 (49%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RIS+A+ + M P TFN +++ L E + G + D
Sbjct: 166 RISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 225
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++ GLC+ G+++ A +L + K E NV Y+T++ GLC+ ++++AF L +ME++
Sbjct: 226 TVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 285
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI D T+N LIS L G+ + +LL M + PN ++ ++ + + EA
Sbjct: 286 GIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEA 345
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++L MI + P+ V+Y LI+G C +++ + MV + +P + + ++
Sbjct: 346 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 403
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 154/341 (45%), Gaps = 38/341 (11%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+S+L + K K N +Y II+ L + K D D+ +++ + + D F YN +
Sbjct: 241 LSLLKKMEKGK-IEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI--KPDVFTYNSL 297
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEI----- 182
GR S A L DM P+V TFN +++ L+ + KL+ E+
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 357
Query: 183 -----------------------QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
Q I+T D N L+KG C+ +E
Sbjct: 358 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGME 417
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ E ++ N TY+TL+ GL + G+ + A + ++M S+G+ D +T++IL+ GL
Sbjct: 418 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 477
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K GK+E+ + + E ++ PN +Y ++ G+ + + +L + + + P+ +
Sbjct: 478 KYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 537
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y +I G C + L E+ D + ++M + G +P G + ++
Sbjct: 538 IYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 578
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 6/286 (2%)
Query: 87 YNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRI 144
Y P+ + ++N KR +A+ + Q ++ + D +N + I+G + +
Sbjct: 147 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMVE---MGYKPDTVTFNTL-IHGLFLHNKA 202
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S+A+ + M + C P + T+ V+N L + K +E + N +
Sbjct: 203 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTI 262
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+ +++ AF + ++ + +P+V TY++L+ LC G +A LL M I
Sbjct: 263 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ + VTFN LI K+GK+ E KL + M + PN +Y ++ G R EA++
Sbjct: 323 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 382
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ M+ + P V+Y LI G C K VE+ + ++M Q+G V
Sbjct: 383 IFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 428
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 109/246 (44%), Gaps = 2/246 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ +PN Y +IN R D + I + V K C D YN + A R
Sbjct: 354 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT-LMVSKDC-LPDVVTYNTLIKGFCKAKR 411
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ + +E +M + T+N ++ L A Q I+ GV D +I
Sbjct: 412 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 471
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC+ G LE A V + K EPN+ TY+ ++ G+C+ G VE+ + L + +G
Sbjct: 472 LLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + + + +ISG ++G EE L MK G P+S Y ++ L +
Sbjct: 532 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASA 591
Query: 324 ELVGRM 329
EL+ M
Sbjct: 592 ELIKEM 597
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 3/302 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ + +I+ L + ++ R+ V + C+ D F Y + G I
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRM-VARGCQ-PDLFTYGTVVNGLCKRGDIDL 239
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ L M +V +N +++ L K + ++ G++ D N L+
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC G A +L + ++ PNV T+++L+ ++G + EA L + M ID
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ VT+N LI+G +++E ++ M K C P+ +Y ++ G KR E EL
Sbjct: 360 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELF 419
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTF 385
M + + V+Y LI GL + + KKMV G P + + ++ G +
Sbjct: 420 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 479
Query: 386 GK 387
GK
Sbjct: 480 GK 481
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 8/236 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD P+ Y +I +AKR + ++ + + L + YN + AG
Sbjct: 390 KDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL--VGNTVTYNTLIQGLFQAGDC 447
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDACCL 201
A + M S P + T++++L+ L YG+++ ++ K +E +
Sbjct: 448 DMAQKIFKKMVSDGVPPDIITYSILLDGLCK---YGKLEKALVVFEYLQKSKMEPNIYTY 504
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NI+++G+C+ G +E + + + +PNV Y+T++ G C KG EEA L M+
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 564
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+G D+ +N LI + G +L++ M+ G ++++ V+ L D +
Sbjct: 565 DGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 620
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + ++ PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E +MI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 121/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ + G + A V D K + P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M++ G+ D T+++LI+GL K+ K+++ +L + M G PN ++
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 134/272 (49%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQS-VFDAITKWSLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + ++M + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G++P
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K + N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + P+ +Y ++YGL K +A++L+ M + + P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E KKM+++
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKKMIKE 340
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF ++M E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 2/215 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV--PNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF + K+N + Y+ L+ GLC++G +A +L M S G+ +
Sbjct: 321 NCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
T+ ++I+ K+G V G KLL+ M+ G P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 128/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ + G + A V D K P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M++ G+ D T+++LI+GL K+ K+++ +L + M G PN ++
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +
Sbjct: 246 TLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 134/272 (49%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQS-VFDAITKWGLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG + A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E ++ +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G+VP
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K G+ N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V M++ ++M + P+ +Y ++YGL K +A++L+ M + + P
Sbjct: 252 CKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGSCKEGDLETALEYRKRMIKE 340
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E A +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 2/215 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV--PNGVTFTTLIDGHCKNGRVVLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE A K+N + Y+ L+ GLC++G +A +L M S G+ +
Sbjct: 321 SCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
T+ ++I+ K+G V G KLL+ M+ G P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415
>gi|449479638|ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 143/290 (49%), Gaps = 3/290 (1%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
S+ K + Y + LA K+F IE+I++ K + +GF +I++YG A
Sbjct: 65 SESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIK-EEGFVIRLIRLYGK-A 122
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACC 200
G S+A + ++P C +V++FN +L V +K + +++ I+ + L +E D
Sbjct: 123 GMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSS 182
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI++ CE + + A + K EP++ T++TL+ L KG + + RME
Sbjct: 183 YNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWARME 242
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++ I D V++N + G+ ++++G++LL +M+ K P+ Y ++
Sbjct: 243 NKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLE 302
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
EAK+ ++ + P+ +Y+ L+ LC + + + K+ + + FV
Sbjct: 303 EAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCKEAINKRFV 352
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 3/225 (1%)
Query: 103 QAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWP 161
++K FD +E I + + E L +D YN VI Y M KAI M P
Sbjct: 156 KSKEFDQVEKIFREVPQE-LSIEADVSSYNIVINAYCEMDD-FDKAILFFNHMEKNGMEP 213
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
+ TFN +L L + + + ++ + D N L+G+ + ++ +L
Sbjct: 214 DLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIELL 273
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
+ ++ +P+V Y+TL+ C+ G++EEA +++ +D + T+ L+ L ++
Sbjct: 274 AKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTLLPLLCEK 333
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
G + G++L + K ++A Q V+ GL + + EAK+LV
Sbjct: 334 GDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLV 378
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 182/392 (46%), Gaps = 32/392 (8%)
Query: 10 NHRQSIIQSLSSASTITRKRTFA--------------LASPSA------SHQDSDHHAYK 49
NH+ S+ S + T+ + + F L+SPS H D D ++
Sbjct: 95 NHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQI 154
Query: 50 LNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDA 109
L+ WL + ++N R I V ++ + + P+ T+++N LA+A+ +
Sbjct: 155 LS---WL-----VIFYANSRMTQDAIQVF-EHMRVHGFKPHLHACTVLLNSLAKARLTNM 205
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLV 169
+ + + K+ ++ + +NV+ +G + KA + L +M S +P + T+N +
Sbjct: 206 VWKVYK--KMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTL 263
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC-ENGNLEAAFYVLDEFPKQN 228
++L ++ E GI + GV D N L+ G C E +LE A + + +
Sbjct: 264 ISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEG 323
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
P V TY++++ LCE+G +++A LL M ++ D VT N LI+ K G + M
Sbjct: 324 LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAM 383
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
K+ ++M G P+ +++ +++G AKE + M+ SPS+ +Y L+
Sbjct: 384 KVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSY 443
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+Q E V + ++ ++G + ++R ++
Sbjct: 444 YDQDNKEAVIRLPDELSRKGLFVDISVYRALI 475
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 80/201 (39%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+I A L +M P T N ++N G + + G++ D
Sbjct: 342 GKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTF 401
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G C+ +++A L E P+ TYS L+ ++ N E L + +
Sbjct: 402 KALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSR 461
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G+ D + LI L K K+E ++ M+GKG +S Y + Y +
Sbjct: 462 KGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIA 521
Query: 322 AKELVGRMICERMSPSFVSYK 342
A +++ M R+ + Y+
Sbjct: 522 ASDMLDEMDKRRLMITLKIYR 542
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 78/187 (41%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+N +L L + + ++ VE D N L+ C+ G++ +A V
Sbjct: 326 PGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 385
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ + +P+ T+ L+HG C+ V+ A L M G T++ L+
Sbjct: 386 KKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYD 445
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
Q E ++L + + KG + + + Y+ ++ L + A+ + M + M V
Sbjct: 446 QDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVV 505
Query: 341 YKKLIHG 347
Y L +
Sbjct: 506 YTSLAYA 512
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 107/233 (45%), Gaps = 7/233 (3%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT------SAAKLGVEID 197
I + E L +M PSV TF +++N L A+ E ++ + +GVE D
Sbjct: 297 IKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPD 356
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNC-EPNVRTYSTLMHGLCEKGNVEEAFGLL 256
N L+ GLC+ G E +L+E N PN TY+ L+ G + GN + A L
Sbjct: 357 VVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELF 416
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+M EG+ + +T N L+ GL K G+V ++ MKGKG N+A+Y ++
Sbjct: 417 RQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGV 476
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A + M+ SP V Y LI GLC + D V+ K+ GF
Sbjct: 477 NNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGF 529
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 152/358 (42%), Gaps = 41/358 (11%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D S +L RD + +L + KRK P+ + +++N L +A+R D +
Sbjct: 280 DAASCNALLTWLGRGRDIKRMNELLAEMEKRK-IRPSVVTFGILVNHLCKARRIDEALQV 338
Query: 114 MQRIKVEKLCRF----SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC-WPSVKTFNL 168
R++ + + D +N + G+ + L +M N P+ T+N
Sbjct: 339 FDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNC 398
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG---------------- 212
+++ A + ++ + GV+ + LN L+ GLC++G
Sbjct: 399 LIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKG 458
Query: 213 -------------------NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
N+ A +E C P+ Y +L+ GLC G + +A
Sbjct: 459 LKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDAS 518
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
++ +++ G D +N+LISG K+ K+E +LL M+ G P++ +Y ++ L
Sbjct: 519 VVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYL 578
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
F A +++ +MI E + PS V+Y +IH C++K V++ + +M VP
Sbjct: 579 GKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVP 636
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 143/347 (41%), Gaps = 77/347 (22%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VE 120
+S+L + PN Y +I+ +A FD ++ +++ V+
Sbjct: 377 LSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVD 436
Query: 121 KLCRFSDGFFYNVIKIYGNMAGR---------------------ISKAIETLFDMPSYNC 159
LC+ G + ++ + M G+ I++A++ +M S C
Sbjct: 437 GLCKH--GRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGC 494
Query: 160 WP-SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-GVEIDACCLNILLKGLCENGNLEAA 217
P +V ++L+ L ++ ++ + S KL G +D C N+L+ G C+ LE
Sbjct: 495 SPDAVVYYSLISGLCIAGRMND--ASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERV 552
Query: 218 FYVLDEFP-----------------------------------KQNCEPNVRTYSTLMHG 242
+ +L E K+ P+V TY ++H
Sbjct: 553 YELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHA 612
Query: 243 LCEKGNVEEAFGLLERM-ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
C K NV+E + M + + +TV +NILI L + V+ + L+E MK K P
Sbjct: 613 YCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRP 672
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
N+ +Y +L G+ DKK +A EL+ RM+ E P +++ + L L
Sbjct: 673 NTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWL 719
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 8/210 (3%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+LG +DA N LL L +++ +L E K+ P+V T+ L++ LC+ ++
Sbjct: 274 RLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRID 333
Query: 251 EAFGLLERMESE------GIDADTVTFNILISGLRKQGKVEEGMKLLERMK-GKGCYPNS 303
EA + +R+ + G++ D V FN LI GL K GK E+G+ LLE MK G PN+
Sbjct: 334 EALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNT 393
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y ++ G F A EL +M E + P+ ++ L+ GLC V +
Sbjct: 394 VTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNE 453
Query: 364 MVQQGFVPRMGMWREIVGCVTFGKDNRNRV 393
M +G + ++ G +N NR
Sbjct: 454 MKGKGLKGNAATYTALISAFC-GVNNINRA 482
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 114/246 (46%), Gaps = 12/246 (4%)
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK 121
L I + D V+S L K ++ + + Y ++I+ + K+ + + +++ ++E+
Sbjct: 508 LCIAGRMNDASVVVSKL----KLAGFSLDRSCYNVLISGFCKKKKLERVYELL--TEMEE 561
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
D YN + Y G + A + + M PSV T+ +++ S K E
Sbjct: 562 TGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDE 621
Query: 182 ---IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
I G S +K V + NIL+ LC N +++ A ++++ + PN TY+
Sbjct: 622 GMKIFGEMCSTSK--VPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNA 679
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
++ G+ +K + +AF L++RM E D +T +L L G++E+ +E +
Sbjct: 680 ILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQDSS 739
Query: 299 CYPNSA 304
YP S+
Sbjct: 740 -YPASS 744
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 10/183 (5%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV---EEAFGLLERME 260
LL+ L ++G A +VLDE P+ N +V T + L G E GL+ ++
Sbjct: 180 LLRVLLKSGRAGDALHVLDEMPQANSGFSV-TGEIVFGELVRSGRSFPDGEVVGLVAKLG 238
Query: 261 SEGIDADTVTFNILIS---GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
G+ D L+ G +K G E + + R+ G ++AS +L L +
Sbjct: 239 ERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGA---VDAASCNALLTWLGRGR 295
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
EL+ M ++ PS V++ L++ LC + +++ V ++ +G +G+
Sbjct: 296 DIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEP 355
Query: 378 EIV 380
++V
Sbjct: 356 DVV 358
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 125/252 (49%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+F+N++ G I A + + PSV +FN ++N + E + +
Sbjct: 126 YFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNA 185
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGR 245
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 246 VDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 305
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + A E RMI E + V+Y LI GLC ++ D + VL++M+ G
Sbjct: 306 LIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVG 365
Query: 369 FVPRMGMWREIV 380
P G + I+
Sbjct: 366 LKPDTGTYTMII 377
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 10/256 (3%)
Query: 141 AGRISKAIETLFDMPSYNC---------WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+G I+ +E+ F + C W T VL L+ K + + G Y +
Sbjct: 59 SGLITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILE 118
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G NIL+ C+ G++ A V + K P+V +++TLM+G G+++E
Sbjct: 119 CGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDE 178
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
F L M + G+ D T+++LI+GL K+ K+++ ++ + M KG PN ++ ++
Sbjct: 179 GFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLID 238
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G R A E+ +M+ + + P ++Y LI+GLC + ++ ++ +M +G P
Sbjct: 239 GHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKP 298
Query: 372 RMGMWREIV-GCVTFG 386
+ ++ GC G
Sbjct: 299 DKITYTTLIDGCCKEG 314
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 111/211 (52%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P V T+++++N L + ++ G+ + L+ G C+NG
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGR 245
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+
Sbjct: 246 VDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 305
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+G +E + +RM + + +Y ++ GL ++R+ +A++++ M+
Sbjct: 306 LIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVG 365
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+ P +Y +I+ C + V +LK+M
Sbjct: 366 LKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + + L +G + + GR+ A
Sbjct: 192 QPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGL--VPNGVTFTTLIDGHCKNGRVDLA 249
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + + + G++ D L+ G
Sbjct: 250 MEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDG 309
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVR----TYSTLMHGLCEKGNVEEAFGLLERMESEG 263
C+ G+LE AF E K+ + +R Y+ L+ GLC++ +A +L M S G
Sbjct: 310 CCKEGDLETAF----EHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVG 365
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
+ DT T+ ++I+ K+G V G KLL+ M+
Sbjct: 366 LKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 397
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 137/292 (46%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +IN + D + ++ +E C D F YN++ R
Sbjct: 135 PNVVTYNTLINGFCKLGNMDEAVVLFNQM-LENSCS-PDVFTYNILIDGYCKQERPQDGA 192
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M Y C P+ T+N +++ LV + Y + + + + N+++
Sbjct: 193 KLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMF 252
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G L+ A+ + + C P++ TY+ ++ G C +++A LLERM G D
Sbjct: 253 CKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDV 312
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N ++SGL K +V+E ++ E ++ G + + + ++ GL +R +A++L+
Sbjct: 313 VTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLRE 372
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M +P V+Y LIHG C ++ +M+ +G VP + + ++
Sbjct: 373 MERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVI 424
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 3/293 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y+ +IN +A+ F ++ ++EK YN I GR+ A
Sbjct: 30 SPDSITYSTLINGFCKARDFQQAYRLLD--EMEKRGIVPHNAVYNTIIKGLCDNGRVDSA 87
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ DM + C PSV T+ ++++ L + + I + G + N L+ G
Sbjct: 88 LVHYRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 146
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ GN++ A + ++ + +C P+V TY+ L+ G C++ ++ LL+ M G + +
Sbjct: 147 FCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 206
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+N L+ L K GK + L + M + C P+ ++ ++ + A EL
Sbjct: 207 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 266
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M P +Y +I G C ++D +L++M + G P + + IV
Sbjct: 267 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIV 319
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 114/256 (44%), Gaps = 34/256 (13%)
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C P T++ ++N A+ + + + K G+ N ++KGLC+NG +++A
Sbjct: 29 CSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 88
Query: 219 ----------------------------------YVLDEFPKQNCEPNVRTYSTLMHGLC 244
+L++ + C PNV TY+TL++G C
Sbjct: 89 VHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 148
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ GN++EA L +M D T+NILI G KQ + ++G KLL+ M GC PN
Sbjct: 149 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 208
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ L+ ++ +A L M+ PS ++ +I C ++ + + M
Sbjct: 209 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 268
Query: 365 VQQGFVPRMGMWREIV 380
+G +P + + ++
Sbjct: 269 TDRGCLPDIYTYNIMI 284
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 105/211 (49%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
+C PS TFNL++++ ++ G D NI++ G C ++ A
Sbjct: 237 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 296
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+L+ + C P+V TY++++ GLC+ V+EA+ + E + + G D VT + LI G
Sbjct: 297 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG 356
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L K ++++ KLL M+ G P+ +Y +++G + ++ M+ + P+
Sbjct: 357 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPT 416
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++Y +I LC V D +LK M+++G
Sbjct: 417 VITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 2/221 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q R+D P+ + L+I+ + + D ++ Q + ++ C D + YN++
Sbjct: 229 LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ-LMTDRGC-LPDIYTYNIMISG 286
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
A RI A + L M C P V T+N +++ L A E +Y G +D
Sbjct: 287 ACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLD 346
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+ L+ GLC++ L+ A +L E + P+V Y+ L+HG C+ ++++
Sbjct: 347 VVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFS 406
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
M +G +T++I+I L K +V +G LL+ M +G
Sbjct: 407 EMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 112/243 (46%), Gaps = 4/243 (1%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN Y +++ L ++ ++ DA + ++ + + C+ S F +I ++ + G++ A
Sbjct: 205 PNFITYNTLMDSLVKSGKYIDAFN--LAQMMLRRDCKPSHFTFNLMIDMFCKV-GQLDLA 261
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E M C P + T+N++++ A + + + + G D N ++ G
Sbjct: 262 YELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSG 321
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ ++ A+ V + +V T STL+ GLC+ +++A LL ME G D
Sbjct: 322 LCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 381
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + ILI G K ++++ + M KGC P +Y V+ L R + L+
Sbjct: 382 VVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLK 441
Query: 328 RMI 330
M+
Sbjct: 442 TML 444
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+L + KK+ EA +L +C SP ++Y LI+G C + + +L +M ++G
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63
Query: 369 FVPRMGMWREIV 380
VP ++ I+
Sbjct: 64 IVPHNAVYNTII 75
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 1/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +++ ++A RF + +R+ V+ + + + V+ +Y MA + +
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRM-VDSGVQPAIVTYNVVLHVYSKMAVPWKEVV 210
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E + M + P T+N +++ LY E ++ G E D N LL
Sbjct: 211 ELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 270
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ + A V+ E + C P+V TY++L+ + G +E+A L + ME +G+ D
Sbjct: 271 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDV 330
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ LISGL + GK++ + + M GC PN +Y ++ + +FPE +
Sbjct: 331 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 390
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P V++ L+ L +V V K+M + G++P + ++
Sbjct: 391 FRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLI 442
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 148/363 (40%), Gaps = 68/363 (18%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
VL ++S + P + L K P+ Y +I+ + + + +K
Sbjct: 195 VLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMK-- 252
Query: 121 KLCRFSDGF------FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ GF F +++ +YG A R +AIE + +M C PSV T+N +++ V
Sbjct: 253 -----ASGFEPDKVTFNSLLDVYGK-ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYV 306
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
L + + G++ D L+ GL G ++AA DE + C+PN+
Sbjct: 307 KDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 366
Query: 235 TYSTL--MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL------------ISG--- 277
TY+ L MHG+ +G E + + S G D VT+N L +SG
Sbjct: 367 TYNALIKMHGV--RGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFK 424
Query: 278 -LRKQGKVEE-------------------GMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
++K G + E M++ +RM G YP+ ++Y VL L
Sbjct: 425 EMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGG 484
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK-------LVEDV--------DWVLK 362
R+ +A++L M P SY L+H N K L +D+ +W++K
Sbjct: 485 RWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVK 544
Query: 363 KMV 365
+V
Sbjct: 545 TLV 547
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 111/247 (44%), Gaps = 2/247 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ +D P+E Y+ +++ A AKR D ++ + I E++ + + + +
Sbjct: 497 EERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERI--EPHNWLVKTLVLVNSKVN 554
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+++A + ++ C + N ++++ ++ +++ I + + + + A N
Sbjct: 555 NLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYN 614
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G+ E +L E P+ +Y+T+++ KG ++EA L M+
Sbjct: 615 SLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS 674
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D VT+NI + EE ++L+ M +GC PN +Y ++ G + +A
Sbjct: 675 GLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 734
Query: 323 KELVGRM 329
K V +
Sbjct: 735 KIFVSNL 741
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 126/300 (42%), Gaps = 5/300 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ +L ++ R I V+ Q +R P+ Y +I+ + + +
Sbjct: 259 DKVTFNSLLDVYGKARRHDEAIEVI-QEMERVGCPPSVVTYNSLISSYVKDGLLEQAVAL 317
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
Q ++V+ + D Y + + AG+I AI +M C P++ T+N ++ +
Sbjct: 318 KQEMEVKGMK--PDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMH 375
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ E+ ++ G D N LL +NG V E K P
Sbjct: 376 GVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 435
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY +L+ G + A + +RM GI D T+N ++S L + G+ E+ KL
Sbjct: 436 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 495
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M+ + C P+ SY +L+ + KR + K L + ER+ P K L+ L N K+
Sbjct: 496 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLV--LVNSKV 553
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 129/315 (40%), Gaps = 3/315 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+ Y P Y +I+ ++ FD I +R+ + + D YN + G
Sbjct: 427 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGI--YPDVSTYNAVLSALARGG 484
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R +A + +M +C P +++ +L+ +AK +++ + +E +
Sbjct: 485 RWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVK 544
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ + NL A E ++ C ++ + ++ + V + +L M+
Sbjct: 545 TLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES 604
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
I+ T+N L+ + G E+ +L +K G P+ SY V+Y K + EA
Sbjct: 605 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 664
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-G 381
L M C + P V+Y + + + E+ +++ MV QG P + IV G
Sbjct: 665 SRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEG 724
Query: 382 CVTFGKDNRNRVYVT 396
GK +++V+
Sbjct: 725 YCRNGKLTDAKIFVS 739
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 127/283 (44%), Gaps = 12/283 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + Y +++ LA+ R++ E + ++ E+ C+ + + +++ Y N A R+ K
Sbjct: 468 PDVSTYNAVLSALARGGRWEQAEKLFAEME-ERDCKPDEYSYSSLLHAYAN-AKRLDKMK 525
Query: 149 ETLFDMPSYNCWPS---VKTFNLVLNLLVSAKL--YGEIQGIYTSAAKLGVEIDACCLNI 203
D+ S P VKT +LV++K+ E + + + +D LN
Sbjct: 526 ALSDDIYSERIEPHNWLVKTL-----VLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNA 580
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ +N + +L + + TY++LMH G+ E+ +L ++S G
Sbjct: 581 MVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSG 640
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D ++N +I ++G+++E +L MK G P+ +Y + + F EA
Sbjct: 641 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAI 700
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
ELV M+ + P+ +Y ++ G C + D + + Q
Sbjct: 701 ELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 743
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 120/274 (43%), Gaps = 42/274 (15%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ +FN +L+ L K Y ++ +Y G+ D C LNILL LC L F
Sbjct: 67 PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF--------- 271
++ PN+ TY+TL+ GLC + + EA L RM+ G D VT+
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186
Query: 272 --------------------------------NILISGLRKQGKVEEGMKLLERMKGKGC 299
NI++ GL K G+ +E +L E MK +G
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P+ SY +++G ++ E+K L+ M+ + + P V++ LI LC + V +
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306
Query: 360 VLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNR 392
+L M++ G VP + + ++ G G N R
Sbjct: 307 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAR 340
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 154/342 (45%), Gaps = 26/342 (7%)
Query: 57 SPTEVLKIFSNLRDPIS-------VISVLNQYSKRKDYNPNEALYTLIINKLAQAKR--- 106
+PT L F++L ++ V S+ NQ + + + +++N L R
Sbjct: 64 TPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQM-RLSGLSSDRCTLNILLNCLCNVNRLRE 122
Query: 107 -FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKT 165
F A I++R + YN + M RIS+A M C P V T
Sbjct: 123 GFAAFAGILRRGYSPNIVT------YNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVT 176
Query: 166 FNLVL-------NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
+ ++ N+ ++ KL+ E+ S ++ + + NI++ GLC+ G + A
Sbjct: 177 YGTLIKGLCGTGNINIALKLHQEMLN-DISRYEINCKPNVITYNIIVDGLCKVGREDEAK 235
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ +E Q P++ +Y++L+HG C G EE+ LL+ M +G+ D VTFN+LI L
Sbjct: 236 QLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTL 295
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K+GKV E KLL M G P+ +Y ++ G A+EL M + P
Sbjct: 296 CKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDV 355
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+SY LI+G VE+ + +M+ G P + + ++
Sbjct: 356 ISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLL 397
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 129/292 (44%), Gaps = 8/292 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ Y+PN Y +I L R + R+ +KL D Y + G
Sbjct: 132 RRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM--QKLGCTPDVVTYGTLIKGLCGTGN 189
Query: 144 ISKAI----ETLFDMPSY--NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
I+ A+ E L D+ Y NC P+V T+N++++ L E + ++ G+
Sbjct: 190 INIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPS 249
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+ G C G E + +LDE Q +P++ T++ L+ LC++G V EA LL
Sbjct: 250 IISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG 309
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M GI D VT+N LI G G + +L M KGC P+ SY ++ G
Sbjct: 310 VMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTL 369
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ EA +L M+ P+ ++Y L+ G+ V+D + M G
Sbjct: 370 KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 421
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 150/341 (43%), Gaps = 40/341 (11%)
Query: 77 VLNQYSKRK-DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+LN S+ + + PN Y +I++ L + R D + + + +K + + YN +
Sbjct: 200 MLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM--IPSIISYNSL- 256
Query: 136 IYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
I+G AG+ ++ L +M P + TFN++++ L E + + + G+
Sbjct: 257 IHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 316
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D N L++G C G+L +A + P + CEP+V +Y+ L++G + VEEA
Sbjct: 317 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMK 376
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L M G + +T++ L+ G+ GKV++ KL MK G NS +Y L GL
Sbjct: 377 LYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLC 436
Query: 315 DK-------KRFPEAK----------------------------ELVGRMICERMSPSFV 339
K F E K EL ++ E P+ V
Sbjct: 437 KNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVV 496
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+Y +IHG C + V+ + +++KM G P + + ++
Sbjct: 497 TYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLM 537
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 129/265 (48%), Gaps = 36/265 (13%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGE----------- 181
M G ++ A E MPS C P V ++N+++N + + KLY E
Sbjct: 332 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 391
Query: 182 -----IQGIYTS-----AAKL-------GVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
++GI+ + A KL G+ ++ I L GLC+N L A + E
Sbjct: 392 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 451
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
N + + + L+ GLC+ G +E A+ L E++ +EG + + VT+ I+I G ++G+V
Sbjct: 452 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 511
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
++ L+++M+ GC P+ +Y ++ G + + E +L+ RM + +SP ++ +
Sbjct: 512 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIV 571
Query: 345 IHGLCNQKLVEDVDWVLKKM-VQQG 368
+ L + ++ +L + +Q+G
Sbjct: 572 VDMLSKDEKYQECLHLLPRFPIQKG 596
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 85 SGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 144
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K++ +L + M KG PN ++ ++ G R
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + + P ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 324
Query: 381 -GCVTFG 386
GC G
Sbjct: 325 DGCCKEG 331
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 133/255 (52%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 143 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 199
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 319
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 366 QQGFVPRMGMWREIV 380
G P G + I+
Sbjct: 380 SVGLKPDTGTYTMII 394
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 108/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L ++ G+ + L+ G C+NG ++ A +
Sbjct: 210 PDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D T+ LI G K
Sbjct: 270 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 329
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGT 389
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G P
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEMHRDGHAP 420
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 209 QPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLV--PNGVTFTTLIDGHCKNGRVDLA 266
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 267 MEIYKQMLSQSLLPDLITYN-----------------------------------TLIYG 291
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ A ++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 292 LCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 351
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G P++ +Y ++ K + +L+
Sbjct: 352 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLK 411
Query: 328 RMICERMSPSFVSYKKLIHG 347
M + +PS V+Y L++G
Sbjct: 412 EMHRDGHAPSVVTYNVLMNG 431
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 114/242 (47%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
M G++ + + DM P+V T+N+++N L + E G K+G +
Sbjct: 144 MEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVV 203
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+ L+ G C G ++ A V D + C PNV TY++LM+G C+ +EEA LL+
Sbjct: 204 NYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDET 263
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+G+ D VTF +ISGL + G+ +L + G PN +Y +L GL
Sbjct: 264 LRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNL 323
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA L M + P+ V Y LI LC ++D + +++ +G P + + +
Sbjct: 324 EEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTAL 383
Query: 380 VG 381
VG
Sbjct: 384 VG 385
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 116/220 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + F+ + + +V Y + + LG+E D L+IL+ C ++ V
Sbjct: 60 PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K EP++ T++TL++GLC +G +++ L + M G+ + T+N++I+ L K
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
GK E + L++M+ GC PN +Y ++ G + + EA+ + M+ + +P+ +
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y L++G C + +E+ +L + +++G VP + + I+
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTII 279
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 137/286 (47%), Gaps = 4/286 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ PN Y +IIN L+++ + + ++++ EK+ + Y+ + + G++
Sbjct: 161 RGLQPNVYTYNVIINSLSKSGKANEALGFLKQM--EKVGCVPNVVNYSTLIDGYCLRGQM 218
Query: 145 SKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A ++FD M S C P+V T+ ++N + E + + G+ D
Sbjct: 219 DEA-RSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTT 277
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ GLC G AA + PN+ TY L+ GLC+ GN+EEAF L + M+
Sbjct: 278 IISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST 337
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + V + ILI L K GK+++G +L R+ +G PN +Y ++ L + EA
Sbjct: 338 VKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAH 397
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+L +M + +P +Y +I G K ++++MV +GF
Sbjct: 398 KLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGF 443
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 150/328 (45%), Gaps = 3/328 (0%)
Query: 53 KDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIED 112
+D S + ++ F +L +SVL++ K P+ +T ++N L + D +
Sbjct: 95 QDIHSLSILINCFCHLHRVDFGLSVLSKILKL-GLEPSIVTFTTLLNGLCMEGKMDQVMM 153
Query: 113 IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
+ + V L + + YNVI + +G+ ++A+ L M C P+V ++ +++
Sbjct: 154 LYDDMLVRGL--QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
E + ++ G + L+ G C+ +E A +LDE ++ P+
Sbjct: 212 YCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPD 271
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ T++T++ GLC G A L + + G + +T+ +L+ GL K G +EE L +
Sbjct: 272 IVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQ 331
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M+ PN Y ++ L + + KEL R+I E + P+ +Y L+ LC +
Sbjct: 332 EMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEG 391
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ + + +KM + G P + I+
Sbjct: 392 LIIEAHKLFRKMEEDGCTPDKCAYNVII 419
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 41/279 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y+ +I+ + D + + V K C + + +++ Y + RI +A+
Sbjct: 200 PNVVNYSTLIDGYCLRGQMDEARSVFD-LMVSKGCTPNVYTYTSLMNGYCKIE-RIEEAV 257
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L + P + TF +++ L A Q ++ G + +LL GL
Sbjct: 258 QLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGL 317
Query: 209 CENGNLEAAFYVLDEFPK-----------------------------------QNCEPNV 233
C++GNLE AF + E + + +PNV
Sbjct: 318 CKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNV 377
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY+ L+ LC++G + EA L +ME +G D +N++I G + +L+E
Sbjct: 378 YTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEE 437
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
M +G ++A+ L P K L+G CE
Sbjct: 438 MVNRGFSADAAT--RALLNDFPTNDIPALKTLIG--FCE 472
>gi|22655258|gb|AAM98219.1| unknown protein [Arabidopsis thaliana]
gi|31376375|gb|AAP49514.1| At2g38420 [Arabidopsis thaliana]
Length = 444
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 146/307 (47%), Gaps = 12/307 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P Y +I LA++ + + I ++ ++V + + F +VI YG +GRI +AI
Sbjct: 61 PTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYG-FSGRIEEAI 119
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE-IQGIYTSAAKLGVEIDACCLNILLKG 207
E F +P++ C PS T N +L +LV + E + I A ++GV ++ IL+
Sbjct: 120 EVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDA 179
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE--EAFGLLERME----S 261
LC G ++ A ++ + + + R YS L+ +C+ + + G LE + S
Sbjct: 180 LCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFS 239
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ TV L+ G G+ +E + +L +MK P+ Y VL G++ + +P+
Sbjct: 240 PGLRDYTVVMRFLVEG----GRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPK 295
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A +L ++ ++P +Y I+GLC Q +E ++ M + G P + + ++
Sbjct: 296 ADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIK 355
Query: 382 CVTFGKD 388
+ D
Sbjct: 356 ALVKAGD 362
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 116/239 (48%), Gaps = 2/239 (0%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-YNVIKIYGNMAGRISKAIETL 151
LY+ +++ + + K D++ ++ + RFS G Y V+ + GR + + L
Sbjct: 207 LYSRLLSSVCKHKDSSCF-DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVL 265
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
M P + + +VL +++ + Y + ++ LG+ D N+ + GLC+
Sbjct: 266 NQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQ 325
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
++E A ++ K EPNV TY+ L+ L + G++ A L + ME+ G++ ++ TF
Sbjct: 326 NDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTF 385
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+I+IS + +V LLE + S+ +EV+ L +K +A EL+ ++
Sbjct: 386 DIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 444
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 84/189 (44%), Gaps = 12/189 (6%)
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-SEGIDA 266
L ++ N +L F NCEP + Y ++ L + +E +L +E SE D
Sbjct: 38 LTDSENASVMRTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDT 97
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
F +I+ G++EE +++ ++ C P++ + +L L+ K+ ++ ELV
Sbjct: 98 PESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKR---QSLELV 154
Query: 327 GRMICE------RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ + R+ S ++ LI LC V+ +++ M Q + ++ ++
Sbjct: 155 PEILVKACRMGVRLEES--TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLL 212
Query: 381 GCVTFGKDN 389
V KD+
Sbjct: 213 SSVCKHKDS 221
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 162/348 (46%), Gaps = 23/348 (6%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPN----EALYTLIIN----------KL 101
+SP+ V +FS DP + ++ + S+ Y + +L TL+IN +L
Sbjct: 88 ISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRL 147
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGF---FYNVIKIYGNMA------GRISKAIETLF 152
K D++ D + + + + + F + +I Y + G + + +
Sbjct: 148 LMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M P++ T+N ++N E + + G++ D L+ G C+
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+L++AF V E P + C N Y+ L+HGLC + ++EA L +M+ + T+
Sbjct: 268 DLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYT 327
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
+LI L + E + L++ M+ KG PN +Y ++ L + + +A+EL+G+M+ +
Sbjct: 328 VLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEK 387
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P+ ++Y LI+G C + ++ED V++ M + P + E++
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELI 435
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 15/295 (5%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA- 141
+ K PN YT++I+ L + + +++ ++ G NVI Y +
Sbjct: 350 EEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQM-------LEKGLMPNVI-TYNALIN 401
Query: 142 -----GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G I A++ + M S N P+ +T+N ++ ++ + G+ + V
Sbjct: 402 GYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVH-KAMGVLNKMLERKVLP 460
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ G C +GN ++A+ +L + P+ TY++++ LC+ VEEA L
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLF 520
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ +E + + + V + LI G K GKV E +LE+M K C PNS ++ +++GL
Sbjct: 521 DSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTD 580
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ EA L +M+ + P+ + LIH L + ++M+ G P
Sbjct: 581 GKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKP 635
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 143/313 (45%), Gaps = 21/313 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +I+ L ++KR + D+ ++ + + + Y + AG++++A
Sbjct: 495 PDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDV--IPNVVMYTALIDGYCKAGKVNEAH 552
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M S NC P+ TFN +++ L + E + K+ ++ IL+ L
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRL 612
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
++G+ + A+ + +P+ TY+T + C +G +++A ++ +M+ G+ D
Sbjct: 613 LKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDL 672
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK----------- 317
T++ LI G G+ +L+RM GC P+ ++ ++ LL+ K
Sbjct: 673 FTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGV 732
Query: 318 -------RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ-QGF 369
F EL+ +M+ ++P+ SY+KL+ G+C + + V M Q +G
Sbjct: 733 CVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGI 792
Query: 370 VPRMGMWREIVGC 382
P ++ ++ C
Sbjct: 793 SPSELVFNALLSC 805
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 132/313 (42%), Gaps = 7/313 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
+ D + V+ ++ + R PN Y +I + A+ ++ ++ K+ D
Sbjct: 409 IEDALDVVELMESRNLR----PNTRTYNELIKGYCKRNVHKAM-GVLNKMLERKV--LPD 461
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
YN + +G A L M P T+ +++ L +K E ++
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
S + V + L+ G C+ G + A +L++ +NC PN T++ L+HGLC G
Sbjct: 522 SLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDG 581
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++EA L E+M + T ILI L K G + + ++M G P++ +Y
Sbjct: 582 KLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYT 641
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ + R +A+++V +M +SP +Y LI G + VLK+M
Sbjct: 642 TFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDT 701
Query: 368 GFVPRMGMWREIV 380
G P + ++
Sbjct: 702 GCEPSQHTFLSLI 714
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
P+ YT I + R ED++ ++K + D F Y+ +IK YG++ GR + A
Sbjct: 635 PDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVS--PDLFTYSSLIKGYGDL-GRTNSA 691
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG-------------------IYTS 188
L M C PS TF ++ L+ K YG+++G +
Sbjct: 692 FVVLKRMHDTGCEPSQHTFLSLIKHLLEMK-YGKVKGGEPGVCVMSNMMEFDIVVELLEK 750
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP-KQNCEPNVRTYSTLMHGLCEKG 247
+ GV +A L+ G+CE GNL A V D K+ P+ ++ L+ C+
Sbjct: 751 MVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLE 810
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
EA +++ M G + ILI L K+G+ E G + + + G Y + +++
Sbjct: 811 KHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWK 870
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
++ G+ + EL M + S +Y LI G
Sbjct: 871 IIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 600
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 121/241 (50%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A + A++ M + +P VK FNL+ +++ K Y + + +GV+
Sbjct: 61 AKSVDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHT 120
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
LNI++ LC + F VL K EP++ T++T+++GLC +GNV +A ++ ++
Sbjct: 121 LNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLK 180
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G ++D+ T + +GL K G + L++M+ K C + +Y V+ GL
Sbjct: 181 DMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVF 240
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA L +M + + P +Y LIHGLCN ++ +L M+++G +P + + I
Sbjct: 241 EALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIA 300
Query: 381 G 381
G
Sbjct: 301 G 301
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 151/370 (40%), Gaps = 51/370 (13%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEAL--YTLIINKLAQAKRFD-AIEDI 113
S T + ++R+ SV L+ Y K P + + L+ + +A+ K + AI I
Sbjct: 47 SDTSRAQFLDSMRNAKSVDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLI 106
Query: 114 --MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI---ETLFDMPSYNCWPSVKTFNL 168
M I V+ + + I N R+S A+ L M PS+ TFN
Sbjct: 107 KHMSYIGVKPT--------VHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNT 158
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
++N L + +G E D+ + GLC+ G+ AA L + ++N
Sbjct: 159 IVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKN 218
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
C +V YS ++ GLC+ G V EA L +M +GI D T+N LI GL + +E
Sbjct: 219 CNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAA 278
Query: 289 KLLERMKGKGCYPNSASYQEVL-----YGLLDKKR------------------------- 318
LL M KG P+ ++ + G++ + +
Sbjct: 279 PLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAH 338
Query: 319 -----FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+A E+ MI + P+ V+Y LIHG C K + + L +MV G P +
Sbjct: 339 CMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNV 398
Query: 374 GMWREIVGCV 383
W ++G V
Sbjct: 399 VTWSTLIGGV 408
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 126/314 (40%), Gaps = 68/314 (21%)
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC----------W-------- 160
V+ LC+ DG + + ++ M G K I+ D+ +YNC W
Sbjct: 230 VDGLCK--DGMVFEALNLFSQMTG---KGIQP--DLFTYNCLIHGLCNFDRWKEAAPLLA 282
Query: 161 --------PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
P V+TFN++ + + I++ +G+E D ++ C
Sbjct: 283 NMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLN 342
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
++ A V D + C PN+ TY++L+HG CE N+ +A L M + G+D + VT++
Sbjct: 343 QMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWS 402
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL------------------ 314
LI G+ K GK +L M G PN + +L GL
Sbjct: 403 TLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKM 462
Query: 315 -----------------DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
+ +A EL + + + V+Y +I GLC + L++D
Sbjct: 463 NWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDA 522
Query: 358 DWVLKKMVQQGFVP 371
+ +L KM + G P
Sbjct: 523 EDLLMKMEENGCPP 536
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 16/268 (5%)
Query: 89 PNEALYTLIINKL------AQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
P+ + I+N L AQA RF D ++D+ SD + I
Sbjct: 151 PSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYE---------SDSYTCGAITNGLCKV 201
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G S A+ L M NC V ++ V++ L + E +++ G++ D
Sbjct: 202 GHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTY 261
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC + A +L ++ P+V+T++ + + G + A + M
Sbjct: 262 NCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVH 321
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
GI+ D VT+ +I ++++ M++ + M KGC PN +Y +++G + K +
Sbjct: 322 MGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNK 381
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC 349
A +G M+ + P+ V++ LI G+C
Sbjct: 382 AMYFLGEMVNNGLDPNVVTWSTLIGGVC 409
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 125/320 (39%), Gaps = 43/320 (13%)
Query: 84 RKDYNPNEALYTLIIN---KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
RK P+ + +I K R +I M + +E D Y I M
Sbjct: 286 RKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEH-----DVVTYTSIIGAHCM 340
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
++ A+E M S C P++ T+ +++ K + G++ +
Sbjct: 341 LNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVT 400
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL----------------- 243
+ L+ G+C+ G AA + K PN++T + ++ GL
Sbjct: 401 WSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELE 460
Query: 244 ------------------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
C G + +A L + S+G+ D VT+NI+I GL K+G ++
Sbjct: 461 KMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLD 520
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
+ LL +M+ GC PN +Y + GLL + + ++ + + M + + K LI
Sbjct: 521 DAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLI 580
Query: 346 HGLCNQKLVEDVDWVLKKMV 365
+ K ++ L+K V
Sbjct: 581 NYFSANKENRALEVFLQKFV 600
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 147/300 (49%), Gaps = 18/300 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV--IKIYGNMAGRISK 146
P ++ + +A+ K+F+ + D +++++ +G +N+ + I N R K
Sbjct: 86 PGLVDFSRFFSAIARTKQFNLVLDFCKQLEL-------NGIAHNIYTLNIMINCFCRCCK 138
Query: 147 ---AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACC 200
A L + P TFN ++N L L G++ ++ G + D
Sbjct: 139 TCFAYSVLGKVMKLGYEPDTTTFNTLINGLC---LEGKVSKAVVLVDRMVENGCQPDMVT 195
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ G+C +G+ AF +L + ++N + +V TYST++ LC G ++ A L + ME
Sbjct: 196 YNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++GI + VT+N L+ GL K GK +G LL+ M + PN ++ +L + + +
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA EL MI +SP+ ++Y L+ G C Q + + + +L MV+ P + + ++
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 129/257 (50%), Gaps = 6/257 (2%)
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
KV KL D +N + + G++SKA+ + M C P + T+N ++N + +
Sbjct: 148 KVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRS- 206
Query: 178 LYGEIQGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
G+ + K+ V+ D + ++ LC +G ++AA + E + + +V
Sbjct: 207 --GDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TY++L+ GLC+ G + LL+ M S I + +TFN+L+ K+GK++E +L + M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+G PN +Y ++ G + R EA ++ M+ + SP V++ LI G C K V
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 355 EDVDWVLKKMVQQGFVP 371
+D V + + ++G V
Sbjct: 385 DDGMKVFRNISKRGLVA 401
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ II+ L + DA + + ++ + + S YN + AG+ + L D
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGI--KSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S P+V TFN++L++ V E +Y G+ + N L+ G C
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L A +LD + C P++ T+++L+ G C V++ + + G+ A+ VT++I
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ G + GK++ +L + M G P+ +Y +L GL D + +A E+ + +
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
M V Y +I G+C VED W L
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDA-WNL 495
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN + M R+S+A L M C P + TF ++ K + ++ + +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
K G+ +A +IL++G C++G ++ A + E P+V TY L+ GLC+ G +E
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A + E ++ +D V + +I G+ K GKVE+ L + KG PN +Y ++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
GL K EA L+ +M + +P+ +Y LI
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 6/237 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +P+ +T +I KR D + + I L ++ Y+++ +G+
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL--VANAVTYSILVQGFCQSGK 418
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I A E +M S+ P V T+ ++L+ L + I+ K +++
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++G+C+ G +E A+ + P + +PNV TY+ ++ GLC+KG++ EA LL +ME +G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV----LYGLLDK 316
+ T+N LI + G + KL+E MK G +++S + V L G LDK
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDK 595
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 2/266 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y +++ R +++ + V C F ++IK Y M R+
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLD-LMVRNKCSPDIVTFTSLIKGYC-MVKRVDDG 387
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ ++ + T+++++ + + ++ GV D ILL G
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+NG LE A + ++ K + + Y+T++ G+C+ G VE+A+ L + +G+ +
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+ ++ISGL K+G + E LL +M+ G PN +Y ++ L + +L+
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKL 353
M S S K +I L + +L
Sbjct: 568 EMKSCGFSADASSIKMVIDMLLSGEL 593
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 150/353 (42%), Gaps = 16/353 (4%)
Query: 23 STITRKRTFALASPSASHQDSD---HHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLN 79
S I R + F L + + H+ Y LN ++ F SVL
Sbjct: 96 SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI--------MINCFCRCCKTCFAYSVLG 147
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
+ K Y P+ + +IN L + ++ R+ VE C+ D YN I
Sbjct: 148 KVMKLG-YEPDTTTFNTLINGLCLEGKVSKAVVLVDRM-VENGCQ-PDMVTYNSIVNGIC 204
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+G S A + L M N V T++ +++ L ++ G++
Sbjct: 205 RSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L++GLC+ G +L + + PNV T++ L+ ++G ++EA L + M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ GI + +T+N L+ G Q ++ E +L+ M C P+ ++ ++ G KR
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 320 PEAKELVGRMICER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + V R I +R + + V+Y L+ G C ++ + + ++MV G +P
Sbjct: 385 DDGMK-VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N+ T + +++ C A+ +L ++ G + DT TFN LI+GL +GKV + + L+
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLV 181
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+RM GC P+ +Y ++ G+ A +++ +M + +Y +I LC
Sbjct: 182 DRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETV 399
++ + K+M +G + + +V G GK N + + + V
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 58/135 (42%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A + E + P + +S + +++E GI + T NI+
Sbjct: 70 DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I+ + K +L ++ G P++ ++ ++ GL + + +A LV RM+
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189
Query: 335 SPSFVSYKKLIHGLC 349
P V+Y +++G+C
Sbjct: 190 QPDMVTYNSIVNGIC 204
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 119/238 (50%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+S A++ +M C V T+N +LN L K+ + ++ + GV D L
Sbjct: 415 VSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTT 474
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C++GN+ A + + ++ +P+V TY+TLM G C+ G +E+A L M S
Sbjct: 475 LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISRE 534
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I ++F+ILI+G G V E +L + MK KG P + ++ G L +A
Sbjct: 535 IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAN 594
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ + MI E + P ++Y LI+ ++ + +++ M ++G +P + + I+G
Sbjct: 595 DFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILG 652
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 137/279 (49%), Gaps = 4/279 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKAIETLF 152
Y ++N L + K D +++ + + VE+ F D F+ I+G G ++KA+
Sbjct: 437 YNTLLNGLCRGKMLDDADELFKEM-VERGV-FPD-FYTLTTLIHGYCKDGNMTKALSLFE 493
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M + P V T+N +++ + + ++ + +IL+ G C G
Sbjct: 494 TMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLG 553
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+ AF + DE ++ +P + T +T++ G GN+ +A L M SEG+ D +T+N
Sbjct: 554 LVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYN 613
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
LI+ K+ + L+ M+ +G PN +Y +L G R EA+ ++ +MI +
Sbjct: 614 TLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDK 673
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++P +Y LI+G ++ +++ V +M+Q+GFVP
Sbjct: 674 GINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 712
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 130/296 (43%), Gaps = 2/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P Y +IN L + ++ + ++ + LC + +N + + +
Sbjct: 288 KGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLC--PNAATFNPMLVESCRKEDV 345
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A +M P + +F+ ++ + G + +G+ D IL
Sbjct: 346 WEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTIL 405
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C N ++ A + +E ++ C +V TY+TL++GLC +++A L + M G+
Sbjct: 406 INGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 465
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D T LI G K G + + + L E M + P+ +Y ++ G +AKE
Sbjct: 466 FPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKE 525
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L MI + PS++S+ LI+G C+ LV + + +M ++G P + I+
Sbjct: 526 LWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTII 581
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 108/230 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ L +M + + T+N ++N L E G+ A G++
Sbjct: 238 GKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTY 297
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GLC+ G+ E A VLDE PN T++ ++ C K +V EA + M
Sbjct: 298 NALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQ 357
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D ++F+ ++ + G++ + E+MKG G P++ Y ++ G
Sbjct: 358 RGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSG 417
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A ++ M+ V+Y L++GLC K+++D D + K+MV++G P
Sbjct: 418 ALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFP 467
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 115/221 (52%), Gaps = 4/221 (1%)
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG--VEIDACCLNILLKGLCENGNLEAAFYV 220
V F+L++ V A+ E + K G V I+AC N LL + + G ++ A+ V
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINAC--NALLGAIVKVGWVDLAWKV 211
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
++F K NV T + +++ LC+ G ++ L ME +G+ AD VT+N L++ +
Sbjct: 212 YEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCR 271
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G V E L++ M GKG P +Y ++ GL + + AK ++ M+ + P+ +
Sbjct: 272 RGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAAT 331
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ ++ C ++ V + + V +M+Q+G VP + + IVG
Sbjct: 332 FNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVG 372
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 139/310 (44%), Gaps = 11/310 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDI--MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
P+ +YT++IN R D + M+ VE+ C D YN + + G G++
Sbjct: 397 PDTVIYTILINGYC---RNDDVSGALKMRNEMVERGC-VMDVVTYNTL-LNGLCRGKMLD 451
Query: 147 AIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+ LF +M +P T +++ + ++ + ++ D N L+
Sbjct: 452 DADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLM 511
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C+ G +E A + + + P+ ++S L++G C G V EAF L + M+ +GI
Sbjct: 512 DGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIK 571
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
VT N +I G + G + + L M +G P+ +Y ++ + ++ F A L
Sbjct: 572 PTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFL 631
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVT 384
+ M + P+ V+Y ++ G +++ + VL KM+ +G P + ++ G V+
Sbjct: 632 INNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVS 691
Query: 385 FGKDNRNRVY 394
KDN +
Sbjct: 692 --KDNMKEAF 699
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 4/259 (1%)
Query: 93 LYTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET 150
+YTL ++N L + + D + + ++E+ ++D YN + G +S+A
Sbjct: 224 VYTLNIMVNALCKDGKLDNVGVYLS--EMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGL 281
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
+ M P + T+N ++N L Y + + +G+ +A N +L C
Sbjct: 282 VDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCR 341
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
++ A V +E ++ P++ ++S+++ G + A E+M+ G+ DTV
Sbjct: 342 KEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVI 401
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ ILI+G + V +K+ M +GC + +Y +L GL K +A EL M+
Sbjct: 402 YTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMV 461
Query: 331 CERMSPSFVSYKKLIHGLC 349
+ P F + LIHG C
Sbjct: 462 ERGVFPDFYTLTTLIHGYC 480
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 35/197 (17%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI---------QGI------ 185
G + KA E +DM S +PS +F++++N S L E +GI
Sbjct: 517 VGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVT 576
Query: 186 -------YTSAAKL-------------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFP 225
Y A L GV D N L+ + N + AF++++
Sbjct: 577 CNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNME 636
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
++ PN+ TY+ ++ G G ++EA +L +M +GI+ D T+ LI+G + ++
Sbjct: 637 ERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMK 696
Query: 286 EGMKLLERMKGKGCYPN 302
E ++ + M +G P+
Sbjct: 697 EAFRVHDEMLQRGFVPD 713
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T +L L+ + + + G Y + G
Sbjct: 67 SGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILECGYPASLYF 126
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 127 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 186
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 187 ANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVD 246
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ RM+ + + P ++Y LI+GLC ++ ++ +M +G P + ++
Sbjct: 247 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 306
Query: 381 -GCVTFG 386
GC G
Sbjct: 307 DGCCKEG 313
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 133/255 (52%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 125 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 181
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 182 KSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCK 241
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + +RM S+ + D +T+N LI GL K G +++ L++ M KG P+ +
Sbjct: 242 NGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFT 301
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A + RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 302 YTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREML 361
Query: 366 QQGFVPRMGMWREIV 380
G P +G + I+
Sbjct: 362 SVGLKPDIGTYTMII 376
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 107/211 (50%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 192 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEI 251
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
Q+ P++ TY+TL++GLC+ G++++A L++ M +G+ D T+ LI G K
Sbjct: 252 YKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 311
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ K +RM + + +Y ++ GL + + +A++++ M+ + P +
Sbjct: 312 EGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGT 371
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G P
Sbjct: 372 YTMIINEFCKKGDVWKGSKLLKEMQRNGHAP 402
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 191 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL--IPNGVTFTTLIDGHCKNGRVDLA 248
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 249 MEIYKRMLSQSLLPDLITYN-----------------------------------TLIYG 273
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+NG+L+ A ++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 274 LCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLD 333
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G P+ +Y ++ K + +L+
Sbjct: 334 DVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLK 393
Query: 328 RMICERMSPSFVSYKKLIHG 347
M +PS V+Y L++G
Sbjct: 394 EMQRNGHAPSVVTYNVLMNG 413
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 7/296 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI-KIYGNMAGRISK 146
+P+ + YT +I+ L++A RF + +R+ +C YNV+ +Y +A +
Sbjct: 173 DPDASAYTALISALSRASRFRDAVAVFRRMVANGVC--PALVTYNVVLHVYSKIAVPWKE 230
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
+ + M T+N +++ LY E ++ G E D LN LL
Sbjct: 231 VLALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLD 290
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
+ + A VL E + C P+V TY++L+ + G +EEA L E ME +GI+
Sbjct: 291 VYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEP 350
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV--LYGLLDKKRFPEAKE 324
D +T+ L+SGL + GK++ + M GC PN +Y + L+G+ + +FPE
Sbjct: 351 DVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGV--RGKFPEMMI 408
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P V++ L+ L +V V K+M + G+VP + ++
Sbjct: 409 VFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLI 464
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 40/286 (13%)
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+++ +YG A R +AI L +M C PSV T+N +++ V L E +
Sbjct: 287 SLLDVYGK-ARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEV 345
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL--MHGLCEKGNV 249
G+E D L+ GL G ++AA +E + C+PN+ TY+ L +HG+ +G
Sbjct: 346 KGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGV--RGKF 403
Query: 250 EEAFGLLERMESEGIDADTVTFNIL------------ISGLRKQ---------------- 281
E + + + S G D VT+N L +SG+ K+
Sbjct: 404 PEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSL 463
Query: 282 -------GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
G ++ M++ +RM G +P+ ++Y VL L R+ +A++L M
Sbjct: 464 ISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDS 523
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P +SY L+H N K ++ + + + + + G+ + +V
Sbjct: 524 RPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLV 569
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 123/296 (41%), Gaps = 23/296 (7%)
Query: 60 EVLKIFSNLR------DPISVISVLNQYSKRKDYN---------------PNEALYTLII 98
E K+F +R D +++ S+L+ Y K + Y+ P+ Y +I
Sbjct: 265 EAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLI 324
Query: 99 NKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYN 158
+ + + + + ++V+ + D Y + + AG+I AI T +M
Sbjct: 325 SSYVKDGLLEEATQLKEEMEVKGI--EPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNG 382
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
C P++ T+N ++ L + E+ ++ G D N LL +NG
Sbjct: 383 CKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVS 442
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
V E K P TY +L+ G ++A + +RM GI D T+N ++S L
Sbjct: 443 GVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSAL 502
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
+ G+ E+ KL M+ P+ SY +L+ + K+ + K L + ER+
Sbjct: 503 ARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERI 558
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 102/244 (41%), Gaps = 2/244 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D P+E Y+ +++ A AK+ D ++ + + I E++ S + + + +S
Sbjct: 522 DSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERI--ESHNGLVKTLVLVNSKVNNLS 579
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+ ++ C + N ++++ + +++ I + + + + N L+
Sbjct: 580 DTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLM 639
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G+ E +L E P+ +Y+T+++ KG ++EA L M+ G+
Sbjct: 640 HMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLV 699
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D VT+NI + EE + L+ M GC PN +Y +L R + K
Sbjct: 700 PDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSF 759
Query: 326 VGRM 329
+ +
Sbjct: 760 ISNL 763
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 120/298 (40%), Gaps = 2/298 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+ Y P Y +I+ ++ FD +I +R+ + D YN + G
Sbjct: 449 KKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGI--HPDISTYNAVLSALARGG 506
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R +A + +M + + P +++ +L+ +AK +++ + +E +
Sbjct: 507 RWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVK 566
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ + NL E ++ C ++ + ++ + G V++ +L M+
Sbjct: 567 TLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKES 626
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
I+ T T+N L+ + G E+ +L +K P+ SY ++Y K + EA
Sbjct: 627 SINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEA 686
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L M C + P V+Y + + E+ +++ MV G P + I+
Sbjct: 687 SRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTIL 744
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 124/279 (44%), Gaps = 22/279 (7%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISK 146
+P+ + Y +++ LA+ R++ E + ++E L D Y+ ++ Y N A ++ K
Sbjct: 489 HPDISTYNAVLSALARGGRWEQAEKLFA--EMENLDSRPDELSYSSLLHAYAN-AKKLDK 545
Query: 147 AIETLFDM-----PSYNCWPSVKTFNLVL----NLLVSAKLYGEIQGIYTSAAKLGVEID 197
D+ S+N VKT LV NL + K + E++ + +D
Sbjct: 546 MKSLSEDIYAERIESHNGL--VKTLVLVNSKVNNLSDTEKAFLELR-------RRRCSLD 596
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
LN ++ +NG ++ +L + + + TY++LMH G+ E+ +L
Sbjct: 597 INVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILT 656
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
++S D ++N +I ++G+++E +L MK G P+ +Y + +
Sbjct: 657 EIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANS 716
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
F EA +LV M+ P+ +Y ++ C+ + D
Sbjct: 717 MFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIAD 755
>gi|297847728|ref|XP_002891745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337587|gb|EFH68004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 161/326 (49%), Gaps = 13/326 (3%)
Query: 58 PTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI 117
P+ +K+F N DP S + ++ + + Y +II KL +K FD ++ ++ ++
Sbjct: 22 PSAAIKLFRN-PDPEST-------NPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLQL 73
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRI-SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
K + ++ F NVI +G GR+ S+A+ +MP Y C +VK+ N +LN L+
Sbjct: 74 KTDTRIVPTEILFCNVINFFGR--GRLPSRALHMFDEMPQYRCQRTVKSLNSLLNTLLKC 131
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ +++ +S + G + DAC NIL+ G + G + A + DE K+ +P T+
Sbjct: 132 GEFEKMKERLSSIDEFG-KPDACTYNILIHGCSQRGCFDDALKLFDEMVKKKVKPTGVTF 190
Query: 237 STLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
TL+HGLC+ V+EA + + M + G+ + L+ L + G++ KL +
Sbjct: 191 GTLIHGLCKNLRVKEALKMKQDMLKVYGVRPTVHIYASLVKALCQIGELSFAFKLKDEAY 250
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+SA Y ++ L+ R E ++ M + P V+Y LI+G C + E
Sbjct: 251 EGKIKVDSAIYSTLISSLIKAGRSNEVSRILEEMSEKGCKPDTVTYNVLINGFCVENDSE 310
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIVG 381
VL +MV++G P + + I+G
Sbjct: 311 SAYRVLDEMVEKGLKPDVISYNMILG 336
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 138/291 (47%), Gaps = 8/291 (2%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+S ++++ K P+ Y ++I+ +Q FD + + +K+ F +
Sbjct: 141 LSSIDEFGK-----PDACTYNILIHGCSQRGCFDDALKLFDEMVKKKVKPTGVTFGTLIH 195
Query: 135 KIYGNMAGRISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ N+ R+ +A++ DM Y P+V + ++ L + A +
Sbjct: 196 GLCKNL--RVKEALKMKQDMLKVYGVRPTVHIYASLVKALCQIGELSFAFKLKDEAYEGK 253
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+++D+ + L+ L + G +L+E ++ C+P+ TY+ L++G C + + E A+
Sbjct: 254 IKVDSAIYSTLISSLIKAGRSNEVSRILEEMSEKGCKPDTVTYNVLINGFCVENDSESAY 313
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+L+ M +G+ D +++N+++ L + K EE L E M +GC P++ SY+ V GL
Sbjct: 314 RVLDEMVEKGLKPDVISYNMILGVLFRIQKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+ +F EA ++ M+ + P ++ + LC +E + V+ M
Sbjct: 374 CEGLQFEEAAAILDEMLFKGYKPRRDRLERFLQKLCESGKLEILSKVISSM 424
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 2/202 (0%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
+ A+Y+ +I+ L +A R + + I++ + EK C+ D YNV+ + A
Sbjct: 257 DSAIYSTLISSLIKAGRSNEVSRILEEMS-EKGCK-PDTVTYNVLINGFCVENDSESAYR 314
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
L +M P V ++N++L +L + + E ++ + G D I+ GLC
Sbjct: 315 VLDEMVEKGLKPDVISYNMILGVLFRIQKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLC 374
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
E E A +LDE + +P + LCE G +E ++ M D V
Sbjct: 375 EGLQFEEAAAILDEMLFKGYKPRRDRLERFLQKLCESGKLEILSKVISSMHRGNADDAKV 434
Query: 270 TFNILISGLRKQGKVEEGMKLL 291
++ + + K+ + + LL
Sbjct: 435 WSVMIPTTMCKEPVISASLDLL 456
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 1/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +++ ++A RF + +R+ V+ + + + V+ +Y MA + +
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRM-VDSGVQPAIVTYNVVLHVYSKMAVPWKEVV 228
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E + M + P T+N +++ LY E ++ G E D N LL
Sbjct: 229 ELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 288
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ + A V+ E + C P+V TY++L+ + G +E+A L + ME +G+ D
Sbjct: 289 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDV 348
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ LISGL + GK++ + + M GC PN +Y ++ + +FPE +
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P V++ L+ L +V V K+M + G++P + ++
Sbjct: 409 FRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLI 460
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 148/363 (40%), Gaps = 68/363 (18%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
VL ++S + P + L K P+ Y +I+ + + + +K
Sbjct: 213 VLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMK-- 270
Query: 121 KLCRFSDGF------FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ GF F +++ +YG A R +AIE + +M C PSV T+N +++ V
Sbjct: 271 -----ASGFEPDKVTFNSLLDVYGK-ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYV 324
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
L + + G++ D L+ GL G ++AA DE + C+PN+
Sbjct: 325 KDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 384
Query: 235 TYSTL--MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL------------ISG--- 277
TY+ L MHG+ +G E + + S G D VT+N L +SG
Sbjct: 385 TYNALIKMHGV--RGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFK 442
Query: 278 -LRKQGKVEE-------------------GMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
++K G + E M++ +RM G YP+ ++Y VL L
Sbjct: 443 EMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGG 502
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK-------LVEDV--------DWVLK 362
R+ +A++L M P SY L+H N K L +D+ +W++K
Sbjct: 503 RWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVK 562
Query: 363 KMV 365
+V
Sbjct: 563 TLV 565
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 111/247 (44%), Gaps = 2/247 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ +D P+E Y+ +++ A AKR D ++ + I E++ + + + +
Sbjct: 515 EERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERI--EPHNWLVKTLVLVNSKVN 572
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+++A + ++ C + N ++++ ++ +++ I + + + + A N
Sbjct: 573 NLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYN 632
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G+ E +L E P+ +Y+T+++ KG ++EA L M+
Sbjct: 633 SLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS 692
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D VT+NI + EE ++L+ M +GC PN +Y ++ G + +A
Sbjct: 693 GLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 752
Query: 323 KELVGRM 329
K V +
Sbjct: 753 KIFVSNL 759
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 126/300 (42%), Gaps = 5/300 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ +L ++ R I V+ Q +R P+ Y +I+ + + +
Sbjct: 277 DKVTFNSLLDVYGKARRHDEAIEVI-QEMERVGCPPSVVTYNSLISSYVKDGLLEQAVAL 335
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
Q ++V+ + D Y + + AG+I AI +M C P++ T+N ++ +
Sbjct: 336 KQEMEVKGMK--PDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMH 393
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ E+ ++ G D N LL +NG V E K P
Sbjct: 394 GVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 453
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY +L+ G + A + +RM GI D T+N ++S L + G+ E+ KL
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 513
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M+ + C P+ SY +L+ + KR + K L + ER+ P K L+ L N K+
Sbjct: 514 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLV--LVNSKV 571
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 129/315 (40%), Gaps = 3/315 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+ Y P Y +I+ ++ FD I +R+ + + D YN + G
Sbjct: 445 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGI--YPDVSTYNAVLSALARGG 502
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R +A + +M +C P +++ +L+ +AK +++ + +E +
Sbjct: 503 RWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVK 562
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ + NL A E ++ C ++ + ++ + V + +L M+
Sbjct: 563 TLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES 622
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
I+ T+N L+ + G E+ +L +K G P+ SY V+Y K + EA
Sbjct: 623 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 682
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-G 381
L M C + P V+Y + + + E+ +++ MV QG P + IV G
Sbjct: 683 SRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEG 742
Query: 382 CVTFGKDNRNRVYVT 396
GK +++V+
Sbjct: 743 YCRNGKLTDAKIFVS 757
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 127/283 (44%), Gaps = 12/283 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + Y +++ LA+ R++ E + ++ E+ C+ + + +++ Y N A R+ K
Sbjct: 486 PDVSTYNAVLSALARGGRWEQAEKLFAEME-ERDCKPDEYSYSSLLHAYAN-AKRLDKMK 543
Query: 149 ETLFDMPSYNCWPS---VKTFNLVLNLLVSAKL--YGEIQGIYTSAAKLGVEIDACCLNI 203
D+ S P VKT +LV++K+ E + + + +D LN
Sbjct: 544 ALSDDIYSERIEPHNWLVKTL-----VLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNA 598
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ +N + +L + + TY++LMH G+ E+ +L ++S G
Sbjct: 599 MVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSG 658
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D ++N +I ++G+++E +L MK G P+ +Y + + F EA
Sbjct: 659 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAI 718
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
ELV M+ + P+ +Y ++ G C + D + + Q
Sbjct: 719 ELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 761
>gi|357488057|ref|XP_003614316.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515651|gb|AES97274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 504
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 151/333 (45%), Gaps = 9/333 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYS-KRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
L+PT + +I ++P+ + + N+ K Y+ N +Y +IN L + R + D++
Sbjct: 11 LNPTYLTQIIRTQKNPLKALEIFNEAKLKYPKYSHNGPVYATMINILGTSGRLKEMSDLI 70
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+++K E C D F + IK Y G + +AI ++P +NC ++FN +L ++V
Sbjct: 71 EQMK-EDSCECKDSVFVSAIKTYAK-EGLVDEAISLYKNIPQFNCVNWTQSFNTLLEIMV 128
Query: 175 SAKLYGEIQGIYT-SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ + ++ S+ V+ LN+L+ LC + A + E Q C PN
Sbjct: 129 NENKLEDAHSLFVESSCGWEVKSRVQALNLLMYALCRKSRSDLALQIFQEMDYQGCYPNR 188
Query: 234 RTYSTLMHGLCEKGNVEEA----FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+Y +M GLC+ + EA + + R+ +G D V + L+ L GK +E ++
Sbjct: 189 ESYLIVMKGLCQDKRLHEATHLLYSMFWRISLKGNGEDIVIYRTLLDALCDNGKFDEAVE 248
Query: 290 LLERMKGKGCYPNSASYQEV-LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+L ++ KG Y + + D K K + + PS SY + L
Sbjct: 249 ILGKILRKGLKAPKRCYNRLDISQCGDGKDAEVTKRWIHEALVRGSVPSTASYTSMAVDL 308
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ +++ D V+ +M + F P+ ++ V
Sbjct: 309 YEEGKIDEADKVIIEMKDRRFKPKHSIFEAKVA 341
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 141/337 (41%), Gaps = 40/337 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAI-----------------EDI-MQRIKVEKLCRFSDGFF 130
PN Y +++ L Q KR EDI + R ++ LC +G F
Sbjct: 186 PNRESYLIVMKGLCQDKRLHEATHLLYSMFWRISLKGNGEDIVIYRTLLDALC--DNGKF 243
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
++I G + + KA + ++ + K + + A + G + ++A+
Sbjct: 244 DEAVEILGKILRKGLKAPKRCYNRLDISQCGDGKDAEVTKRWIHEALVRGSVP---STAS 300
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ +D L E G ++ A V+ E + +P + + LC+ G V+
Sbjct: 301 YTSMAVD----------LYEEGKIDEADKVIIEMKDRRFKPKHSIFEAKVAALCKVGKVD 350
Query: 251 EAFGLLER-MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-GCYPNSASYQE 308
EA ++E M + + IL+ L G ++ L +M K C + +Y
Sbjct: 351 EAIKVIEEDMVEVNCLPNATVYTILLKNLGGVGNSTSVLESLNKMSKKVNCMADKETYCI 410
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVLKKMVQQ 367
+L L ++++ EA +L+ +M + P +Y LI GLC+ + E V W L+ M+ Q
Sbjct: 411 LLEMLCRERKYLEASQLLEQMSIKSYWPCANTYNLLIEGLCSLGRQYEAVMW-LEDMISQ 469
Query: 368 GFVPRMGMWREIVGCVTFGKDNRNRVYVTETVDSLAS 404
G +P + +W + +F +V TET D + S
Sbjct: 470 GKLPEISVWNSLAS--SFCNSGMMKV-STETFDRIRS 503
>gi|326487712|dbj|BAK05528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 455
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 132/267 (49%), Gaps = 6/267 (2%)
Query: 95 TLIINKLAQAKRFDAIEDIMQRIK--VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
+ +++L ++ D + D++ ++ K + YN++ + G A L
Sbjct: 165 AVCLDRLVSSRCPDVLADLIADLRDLRNKYLPAPNTCVYNILIKHYVKNGDSETAFRVLD 224
Query: 153 DMPSYNCW---PSVKTFNLVLNLLVSAKLYGEIQGIYTSA-AKLGVEIDACCLNILLKGL 208
+M Y C P++ T++ +L L A E ++ K + D N+++ G
Sbjct: 225 EMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNVIIDGF 284
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G +E A + K CEPN Y+TL++G C+KG+VE A + E M S G++ D
Sbjct: 285 CRLGQVEKARTIFGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAGVEPDA 344
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V++ LI L + G V+EG+ L+ M+ KGC + +Y +L GL R E +L+GR
Sbjct: 345 VSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVMDLLGR 404
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVE 355
+ E + + SY+ +++ LC+ +E
Sbjct: 405 LPEEGVQLNVASYRIVMNTLCSSGDME 431
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 96/177 (54%), Gaps = 6/177 (3%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNC---EPNVRTYSTLMHGLCEKGNVEEAF 253
+ C NIL+K +NG+ E AF VLDE + C PN+ TYSTL+ GLC G ++EAF
Sbjct: 199 NTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEAF 258
Query: 254 GLLERM-ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L E M E + I D +T+N++I G + G+VE+ + M+ C PN+ +Y ++ G
Sbjct: 259 ELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLING 318
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV-EDVDWVLKKMVQQG 368
K AK + M + P VSY LI LC V E +D V+ +M ++G
Sbjct: 319 HCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVM-EMREKG 374
>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 16/273 (5%)
Query: 124 RFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYN----------------CWPSVKTFN 167
R +D FF+ + +++A + L+D+ N P ++
Sbjct: 77 RLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYT 136
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
++N L G + + G + N L++GLC++GNL + +LD+ ++
Sbjct: 137 FLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRK 196
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
PN T+S L+ ++ V+EA LL+ + ++G + V++N+L++GL K+G+ EE
Sbjct: 197 GLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 256
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
++ + KG PN S +L L + R+ EA ELV M E SPS V+Y LI
Sbjct: 257 IQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGS 316
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L + ++ VL +M++ F P + I+
Sbjct: 317 LASHGRIQHAFQVLDEMMRASFQPSAATFNPII 349
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 139/310 (44%), Gaps = 24/310 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA--G 142
K +NPN +I+ L R++ +++ + E+ R YN++ G++A G
Sbjct: 266 KGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEE--RSPSLVTYNIL--IGSLASHG 321
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC-- 200
RI A + L +M + PS TFN +++ L G+ + ++ I CC
Sbjct: 322 RIQHAFQVLDEMMRASFQPSAATFNPIISHLCKE---GKADLVVKCLDQM---IHHCCNP 375
Query: 201 ----LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
N + LCE G ++ AF ++ + Y ++ LC KGN AF LL
Sbjct: 376 NDGTFNAIAV-LCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLL 434
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M G D T++ LI GL +G ++E +++ ++ P ++ ++ G
Sbjct: 435 YEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKS 494
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM-----VQQGFVP 371
R + E+ MI + +P+ +Y L+ G+ +++ E VLK++ +++ V
Sbjct: 495 GRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKELYIRQVMRRNTVE 554
Query: 372 RMGMWREIVG 381
R+ M ++ G
Sbjct: 555 RLVMQYDLKG 564
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 134/317 (42%), Gaps = 36/317 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ A YT ++N L + ++++++ E C ++ YN + G +++++
Sbjct: 130 PDAASYTFLVNNLCKRGNIGYAMQLVEKME-ENGCP-TNTVTYNSLVRGLCKHGNLNQSL 187
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L + P+ T + +L + E + G + + N+LL GL
Sbjct: 188 QLLDKLMRKGLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGL 247
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G E A + P + PNV + + ++ LC +G EEA L+ M+SE
Sbjct: 248 CKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSL 307
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+NILI L G+++ ++L+ M P++A++ ++ L + + + + +
Sbjct: 308 VTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQ 367
Query: 329 MI-----------------CE--RMSPSFVS---------------YKKLIHGLCNQKLV 354
MI CE R+ +F Y+ +I LC +
Sbjct: 368 MIHHCCNPNDGTFNAIAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNT 427
Query: 355 EDVDWVLKKMVQQGFVP 371
+L +M+Q GFVP
Sbjct: 428 YPAFQLLYEMIQSGFVP 444
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 132/281 (46%), Gaps = 4/281 (1%)
Query: 93 LYTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET 150
+YTL ++N L + ++F+ + + ++ + + F+D YN + G + +A +
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGV--FADIVTYNTLINAYCREGLVEEAFQL 314
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
L S P + T+N +L L Y + + +LG+ +A N LL +C
Sbjct: 315 LNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICR 374
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
N+ A + DE ++ P++ ++S+L+ L G++ +A ME GI D V
Sbjct: 375 RDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVI 434
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ ILI G + G + + +K+ + M +GC+ + +Y L GL KK F +A L M+
Sbjct: 435 YTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV 494
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M P F ++ LI G C ++ + + MV+ P
Sbjct: 495 ERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKP 535
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 138/298 (46%), Gaps = 5/298 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+LN +S R P Y I+ L + ++D +D++ I++ +L + YN + +
Sbjct: 314 LLNSFSSR-GMEPGLLTYNAILYGLCKIGKYDRAKDVL--IEMLQLGLTPNAATYNTLLV 370
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-SAKLYGEIQGIYTSAAKLGVE 195
I +A E +M P + +F+ ++ +L + LY + + + G+
Sbjct: 371 EICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH-FREMERSGIV 429
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D IL+ G C NG L A + DE + C +V TY+T ++GLC+K +A L
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
M G+ D TF LI G K G +++ + L E M P+ +Y ++ G
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
AKEL MI + + P +SY +++G C+ L+ + + +M+++G P +
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 2/278 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y +N L + K F A D++ VE+ F +I+ Y G + KA+
Sbjct: 470 YNTFLNGLCKKKMF-ADADMLFNEMVERGMVPDFYTFTTLIRGYCK-DGNMDKALNLFEA 527
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M N P T+N +++ A G + ++ + + D +L G C +G
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L A + D+ ++ PN+ T +TL+ G C G++ +A+ L +M S GI D+ ++N
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+ +E+ L+ M+ +G N +Y +L G + + EA++++ +MI
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++P +Y LI+G +Q +++ +M+Q+G VP
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 147/332 (44%), Gaps = 37/332 (11%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ P+ ++ +I LA+ + +M ++E+ D Y ++ G
Sbjct: 390 RRGVLPDLVSFSSLIGVLARNGHL--YQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+S A++ +M + C+ V T+N LN L K++ + ++ + G+ D
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN--------------- 248
L++G C++GN++ A + + + N +P+ TY+TL+ G C+ G
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 249 --------------------VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
+ EA L ++M +GI + VT N LI G + G + +
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ L +M G P+S SY ++ G L + +A L+ M + + ++Y +++G
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C + +++ + VL+KM++ G P + ++
Sbjct: 688 CAEGKMQEAEQVLRKMIEIGINPDGATYSSLI 719
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 146 KAIETLFDMPSYNCWPSVK-TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
K +E+L Y + SV ++L++ V AK E + + GV + N L
Sbjct: 171 KVVESLISTCFY--FGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKL 228
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GL G ++ A+ + E + E NV T + +++ LC+ E L ME +G+
Sbjct: 229 LGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGV 288
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
AD VT+N LI+ ++G VEE +LL +G P +Y +LYGL ++ AK+
Sbjct: 289 FADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKD 348
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
++ M+ ++P+ +Y L+ +C + + + + +M ++G +P + + ++G +
Sbjct: 349 VLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLA 408
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + G+E++ LNI++ LC++ E + L + + ++ TY+TL++ C
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+G VEEAF LL S G++ +T+N ++ GL K GK + +L M G PN+A
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y +L + + EA+E+ M + P VS+ LI L + ++M
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423
Query: 365 VQQGFVP 371
+ G VP
Sbjct: 424 ERSGIVP 430
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 35/197 (17%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + +A E DM + P ++ VLN S+ L E + + G+ +
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Query: 201 LNILLKGLCENG-----------------------------------NLEAAFYVLDEFP 225
N L+KG C +G NLE AF +++E
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEME 669
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
K+ + N+ TY+ +++G C +G ++EA +L +M GI+ D T++ LI+G Q ++
Sbjct: 670 KRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMK 729
Query: 286 EGMKLLERMKGKGCYPN 302
E + + M +G P+
Sbjct: 730 EAFRFHDEMLQRGLVPD 746
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 2/284 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D P+ Y+ +IN + D + +++ + YN I A +
Sbjct: 7 DCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRIS--PNVVTYNSIIAALCKAQTVD 64
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KA+E L M P T+N +++ S+ E GVE D N L+
Sbjct: 65 KAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLM 124
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC+NG A + D K+ +P++ TY TL+ G KG + E GLL+ M GI
Sbjct: 125 DYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 184
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ F+IL+ KQ KVEE M + +M+ +G PN+ +Y V+ L R +A
Sbjct: 185 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLY 244
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+MI E + P + Y LIH LC E + + +M+ +G
Sbjct: 245 FEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGI 288
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 112/239 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + K T +M P+V T+N ++ L A+ + + T+ K GV D
Sbjct: 26 GDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTY 85
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ G C +G + A L + EP+V TY++LM LC+ G EA + + M
Sbjct: 86 NSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTK 145
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D T+ L+ G +G + E LL+ M G +PN + ++ +++ E
Sbjct: 146 RGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEE 205
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A + +M + ++P+ V+Y +I LC VED ++M+ +G P ++ ++
Sbjct: 206 AMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 264
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 19/318 (5%)
Query: 70 DPISVISVLNQYSKRKD-------YN--------PNEALYTLIINKLAQAKRFD-AIEDI 113
D +S +V+N + K D YN PN Y II L +A+ D A+E +
Sbjct: 11 DVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVL 70
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+K + D YN I +G+ +AI L M S P V T+N +++ L
Sbjct: 71 TTMVKSGVM---PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 127
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
E + I+ S K G++ D LL+G G L +LD + PN
Sbjct: 128 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 187
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
+S L+ ++ VEEA + +M +G++ + VT+ +I L K G+VE+ M E+
Sbjct: 188 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQ 247
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M +G P+S Y +++ L ++ +A+EL M+ + S + + +I C +
Sbjct: 248 MIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 307
Query: 354 VEDVDWVLKKMVQQGFVP 371
V + + MV+ G P
Sbjct: 308 VIESVKLFDLMVRIGVKP 325
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 76/149 (51%)
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
+C P+V +YST+++G ++G++++ + M + I + VT+N +I+ L K V++
Sbjct: 7 DCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKA 66
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
M++L M G P+ +Y +++G + EA + +M + + P V+Y L+
Sbjct: 67 MEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDY 126
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
LC + + M ++G P + +
Sbjct: 127 LCKNGRCTEARKIFDSMTKRGLKPDITTY 155
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
G C P+ SY V+ G + + M+ +R+SP+ V+Y +I LC + V+
Sbjct: 5 GGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVD 64
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
VL MV+ G +P + IV
Sbjct: 65 KAMEVLTTMVKSGVMPDCMTYNSIV 89
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 68 SGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 127
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 128 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 187
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+G K+ K ++ +L + M KG PN + ++ G R
Sbjct: 188 ASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVD 247
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 307
Query: 381 -GCVTFG 386
GC G
Sbjct: 308 DGCCKEG 314
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 127/255 (49%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 126 YFFNILMHRFCKDGDIRJA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 182
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ G C+ + A + DE + PN ++TL+ G C+
Sbjct: 183 KSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCK 242
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 243 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKIT 302
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A E RMI E V Y LI GLC + D + +L++M+
Sbjct: 303 YTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREML 362
Query: 366 QQGFVPRMGMWREIV 380
G P + I+
Sbjct: 363 SVGLKPDARTYTMII 377
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 109/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N + ++ G+ + L+ G C+NG ++ A +
Sbjct: 193 PDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEI 252
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G K
Sbjct: 253 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCK 312
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + Y ++ GL + R +A++++ M+ + P +
Sbjct: 313 EGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDART 372
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 373 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 403
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A +++DE + +P+ TY+TL+ G C
Sbjct: 252 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCC 311
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G+++ AF +RM E D V + LISGL +G+ + K+L M G P++
Sbjct: 312 KEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDAR 371
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+Y ++ K + +L+ M + PS V+Y L++G
Sbjct: 372 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 26/303 (8%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y L++ F+ I +K + YN+ + +G++ +A
Sbjct: 295 PNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRS---YNIWMLGLVRSGKLLEAH 351
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +M N P++ ++N++++ L ++ + + I + GV D + LL G
Sbjct: 352 LILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGY 411
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G + A YVL E + C PN+ T + L+H L ++G EA LL+ M G D
Sbjct: 412 CRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDN 471
Query: 269 VTFNILISGLRKQGKVEEGMKLLERM-----------------------KGKGCYPNSAS 305
VT N +I+GL K G +++ ++++ M GK C P+S +
Sbjct: 472 VTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSIT 531
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ GL R EAK+ + MI +++SP + + I+ C Q + VLK+M
Sbjct: 532 YATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEME 591
Query: 366 QQG 368
++G
Sbjct: 592 KKG 594
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 180/418 (43%), Gaps = 70/418 (16%)
Query: 18 SLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPT---------------EVL 62
SL S I R A P H H H+D+ P+ +
Sbjct: 45 SLQSVPAIARILITAKMHPQIDHL---HQLLLSQHRDFAHPSGFSLVRTLADLGLLENAI 101
Query: 63 KIFSNLRD-------PISVISVLNQYSKRKD----------------YNPNEALYTLIIN 99
F +LRD PIS ++L + S ++ P + L+I+
Sbjct: 102 SQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLIS 161
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
L + + ++ ++ EK C+ ++ +++ Y AG S I+ L +M S
Sbjct: 162 ALCEMGYLENAREVFDKMS-EKGCKPNEFSLGILVRGYCR-AGLHSHGIDLLDEMRSSGA 219
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P+ +N V++ L E + + ++G+ D N + LC++G + A
Sbjct: 220 LPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASR 279
Query: 220 V-----LDE---FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT- 270
+ +DE PK PN TY+ ++ G C +G EEA + + M+ +++T++
Sbjct: 280 IFRDMQIDEEMGLPK----PNTVTYNLMLEGFCSEGMFEEARAIFDSMK----NSETLSL 331
Query: 271 --FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+NI + GL + GK+ E +L M K PN SY +++GL F +A+ ++G
Sbjct: 332 RSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGL 391
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM--------GMWRE 378
M ++P V+Y L+HG C + + + ++VL++M+Q G P M +W+E
Sbjct: 392 MRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKE 449
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 153/328 (46%), Gaps = 26/328 (7%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+LN+ ++ K+ PN Y ++++ L + F I+ ++ + D Y+ +
Sbjct: 353 ILNEMAE-KNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVA--PDTVTYSTLLH 409
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G+I +A L +M C+P++ T N++L+ L E + + + G +
Sbjct: 410 GYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGL 469
Query: 197 DACCLNILLKGLCENGNLEAAFYV-------------------LDEFPKQN----CEPNV 233
D N ++ GLC+ GNL+ A + +D F +N C P+
Sbjct: 470 DNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDS 529
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY+T++ GLC+ G V+EA L M + + D++ F+ I KQGK+ ++L+
Sbjct: 530 ITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKE 589
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M+ KGC + +Y ++ GL + + E L+ M + P+ +Y +I L
Sbjct: 590 MEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGK 649
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVG 381
++D +L +M+Q+G P + +R ++G
Sbjct: 650 LKDATCLLDEMLQKGISPNIYTFRILIG 677
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 23/292 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL--------CRFS----DGFFYNVIKI 136
PN Y +I+ L + E ++++++ L CR + G +I
Sbjct: 221 PNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRI 280
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ +M I+ +P P+ T+NL+L S ++ E + I+ S K +
Sbjct: 281 FRDMQ------IDEEMGLPK----PNTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETL 329
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
NI + GL +G L A +L+E ++N +PN+ +Y+ L+HGLC+ G +A +L
Sbjct: 330 SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSIL 389
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M G+ DTVT++ L+ G ++GK+ E +L M GC+PN + +L+ L +
Sbjct: 390 GLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKE 449
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
R EA++L+ M V+ +I+GLC ++ ++ M +G
Sbjct: 450 GRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRG 501
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 138/342 (40%), Gaps = 61/342 (17%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLCRFSDGFFYNVI 134
PN ++++ L + R ED++Q + + LC+ G I
Sbjct: 434 PNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCK--AGNLDKAI 491
Query: 135 KIYGNM-------AGRISKAIETLFDMPSYN--CWPSVKTFNLVLNLLVSAKLYGEIQGI 185
+I M G + + LFD+ + C P T+ ++ L E +
Sbjct: 492 EIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKK 551
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ D+ + + C+ G L +AF VL E K+ C ++RTY++L+ GL
Sbjct: 552 LLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGS 611
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+ + E +GL++ M+ GI + T+N +IS L + GK+++ LL+ M KG PN +
Sbjct: 612 ENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYT 671
Query: 306 Y-----------------------------QEVLYG-----LLDKKRFPEAKELVGRMIC 331
+ +E LY LL +AKEL +
Sbjct: 672 FRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALD 731
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV--QQGFVP 371
++ Y+ LI LC ++D ++L KM+ Q F P
Sbjct: 732 RSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDP 773
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 102/241 (42%), Gaps = 37/241 (15%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYT-------------------SAAKLGVEIDACC- 200
PS+++ + +L++AK++ +I ++ + A LG+ +A
Sbjct: 44 PSLQSVPAIARILITAKMHPQIDHLHQLLLSQHRDFAHPSGFSLVRTLADLGLLENAISQ 103
Query: 201 -----------------LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
N+L + + ++ ++ + +P T++ L+ L
Sbjct: 104 FRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISAL 163
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
CE G +E A + ++M +G + + IL+ G + G G+ LL+ M+ G PN
Sbjct: 164 CEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNR 223
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y V+ L + + EA++LV +M +SP V++ I LC + + + +
Sbjct: 224 VAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRD 283
Query: 364 M 364
M
Sbjct: 284 M 284
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 127/325 (39%), Gaps = 45/325 (13%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS---DGF 129
S I + + + K P+ Y II L + R D + + + +KL S D F
Sbjct: 511 SFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTF 570
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN K G++S A L +M C S++T+N ++ L S EI G+
Sbjct: 571 IYNYCK-----QGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEM 625
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL---CEK 246
+ G+ + N ++ L E G L+ A +LDE ++ PN+ T+ L+ C+
Sbjct: 626 KERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDF 685
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISG----------------------------- 277
G +E F + + + FN L++G
Sbjct: 686 GAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLI 745
Query: 278 --LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
L K GK+++ +L +M K + AS+ V+ L + A E RM+
Sbjct: 746 EKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASE 805
Query: 336 PSFVSYK-KLIHGLCNQKLVEDVDW 359
F ++ K I G N ++ DW
Sbjct: 806 TDFNEHENKNIRGRLNNN--DESDW 828
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 8/301 (2%)
Query: 83 KRKDYNPNEALYTLIIN---KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
K K +PN+ Y +++ +L K + +IM R + + YN++
Sbjct: 275 KSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNL-----LPTVWTYNMLVNGFC 329
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G+I +A +M N P V T+N +++ + E+ + K GV+ +A
Sbjct: 330 NDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAV 389
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NI+LK +C+ GN+ A LD+ + P+ TY+TL+ C+ G + +AF +++ M
Sbjct: 390 TYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEM 449
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S+G+ DT T N ++ L + K++E LL +G + SY ++ G ++
Sbjct: 450 TSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKG 509
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A L M ++ PS ++Y +I GLC + V+ L +M++ G VP + I
Sbjct: 510 DRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNII 569
Query: 380 V 380
+
Sbjct: 570 I 570
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 139/307 (45%), Gaps = 3/307 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE-KLCRFSDGFFYNVIKIYGN-M 140
KR +Y PN ++N L + +I Q +K KL + +N++ IYG +
Sbjct: 167 KRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNIL-IYGYCL 225
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
++ A++ + M + C P ++N +L+ L+ +L E + + G+ +
Sbjct: 226 ESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHT 285
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ G C G L+ A V++ + N P V TY+ L++G C G ++EAF + + ME
Sbjct: 286 YNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEME 345
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ D VT+N LI G + E L+E M KG N+ +Y +L + K
Sbjct: 346 KMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMT 405
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA + +M +SP V+Y LI C + ++ +M +G I+
Sbjct: 406 EATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTIL 465
Query: 381 GCVTFGK 387
C+ K
Sbjct: 466 HCLCVEK 472
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 23/246 (9%)
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A+ +M PS T+N V+ L ++ + + G+ D NI++
Sbjct: 511 RALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIII 570
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C GN+E AF +E + +P+V T + L+ GLC +G +E+A L + S+G D
Sbjct: 571 HGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKD 630
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D VT+N +IS L K+GK E LL M+ K P+ +Y+ ++ L D R EA+E
Sbjct: 631 IDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEF 690
Query: 326 VGRMI-------------------CERMSPSF----VSYKKLIHGLCNQKLVEDVDWVLK 362
+M+ +S F ++Y I+ LCNQ +D +
Sbjct: 691 TLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFV 750
Query: 363 KMVQQG 368
++ ++G
Sbjct: 751 EVTKEG 756
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 143/340 (42%), Gaps = 38/340 (11%)
Query: 66 SNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF 125
S RD V S++ + K K N Y +I+ + K+ + E K+E+
Sbjct: 364 SQWRDSSEVYSLIEEMDK-KGVKCNAVTYNIILKWMC--KKGNMTEATTTLDKMEENGLS 420
Query: 126 SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D YN + AG++ KA + +M S T N +L+ L K E +
Sbjct: 421 PDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNL 480
Query: 186 YTSAAKLGVEIDACCLNILL-----------------------------------KGLCE 210
SA+K G +D IL+ GLC+
Sbjct: 481 LCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQ 540
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
+ ++ A L+E + P+ TY+ ++HG C +GNVE+AF M D T
Sbjct: 541 SRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYT 600
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
NIL+ GL ++G +E+ +KL + KG + +Y ++ L + +F A +L+ M
Sbjct: 601 CNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEME 660
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+++ P +YK +I L + +++ + KMV+ G V
Sbjct: 661 AKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIV 700
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 89/184 (48%)
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A VL + K PN +++ L++G C + V++A + +M G DTV++N ++
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
L K+ ++E LL MK KG PN +Y ++ G EA +++ M + P
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVT 396
+ +Y L++G CN +++ + +M + +P + + ++ + +D+ +
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376
Query: 397 ETVD 400
E +D
Sbjct: 377 EEMD 380
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLC---EKGNVEEAFGLLERMESEGIDADTVTFNI 273
A + ++ + N PN+ T +TLM+ L ++ A +L+ G+ +T +FNI
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNI 218
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G + KV++ + + +M GC P++ SY +L LL ++ EA++L+ M +
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKG 278
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+SP+ +Y L+ G C L+++ V++ M + +P + + +V
Sbjct: 279 LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLV 325
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 27/260 (10%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMA 141
K + P+ Y +I L Q+++ D D + + L D YN+I I+G +
Sbjct: 520 KERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGL--VPDETTYNII-IHGFCLE 576
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + KA + +M P V T N++L L + + ++ + G +ID
Sbjct: 577 GNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTY 636
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ LC+ G E A+ +L E + P+ TY ++ L + G ++EA +M
Sbjct: 637 NTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVE 696
Query: 262 EGI-----------------------DADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
GI D ++ ++ I+ L Q K ++ M L + +G
Sbjct: 697 SGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEG 756
Query: 299 CYPNSASYQEVLYGLLDKKR 318
N +Y ++ GL+ +++
Sbjct: 757 VALNKYTYLNLMEGLIKRRK 776
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + ++ PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A + RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ + G + A V D K + P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M++ G+ D T+++LI+GL K+ K+++ +L + M PN ++
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQS-VFDAITKWSLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ + + L+ G C+NG ++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E K +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G++P
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 108/209 (51%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K + N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +++A L + M + + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ ++M + P+ +Y ++YGL K +A++L+ M + + P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGNCKEGDLETAFKYRKRMIKE 340
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLV--PNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ GLC++G +A +L M S G+ +
Sbjct: 321 NCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
T+ ++I+ K+G V G KLL+ M+ G P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 143/301 (47%), Gaps = 7/301 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF-SDGFFYNVIKIYGNMA 141
KR P + Y +++ A R I+ + ++ F D YNV+ + A
Sbjct: 270 KRDGIAPTQPTYNTLVSAFA---RLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQA 326
Query: 142 GRISKAIETLFDMPSYN-CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ +A +M + P V T+N +++ + + + GV+
Sbjct: 327 GKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVT 386
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI++K LC+ G LE A L++ ++ P+V TY+TL+ C+ GNV +AF L++ M
Sbjct: 387 HNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMV 446
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G+ DT T N ++ L K + E+ +LL +G P+ SY V+ +
Sbjct: 447 GKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPE 506
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A L +MI ++ PS +Y LI GLC ++L E +D L ++V++G VP + I
Sbjct: 507 PALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDK-LNELVEKGLVPDETTYNII 565
Query: 380 V 380
+
Sbjct: 566 I 566
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 147/349 (42%), Gaps = 40/349 (11%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF--DAIEDIMQRIK 118
L ++ LR P +L+ +R+ P+ +++ L+++ A D+ + +
Sbjct: 141 ALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLI 200
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+L + + +N++ G ++ A+ TL M + P T+N +LN +
Sbjct: 201 ELRL--HPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGM 258
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
GE + + + G+ N L+ G ++ A V++ EP++RTY+
Sbjct: 259 LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNV 318
Query: 239 LMHGLCEKGNVEEAF------------------------------------GLLERMESE 262
L GLC+ G V+EAF LLE M +
Sbjct: 319 LAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK 378
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ VT NI++ L K+GK+EE + LE++ +G P+ +Y ++ +A
Sbjct: 379 GVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKA 438
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ M+ + + + +++ LC K ED + +L Q+GFVP
Sbjct: 439 FTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 153/345 (44%), Gaps = 27/345 (7%)
Query: 53 KDWLSPTE-----VLKIFSNL---RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQA 104
+D ++PT+ ++ F+ L + V+ + Y + P+ Y ++ L QA
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG----FEPDLRTYNVLAVGLCQA 326
Query: 105 KRFDA---IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK-AIETLFDMPSYNCW 160
+ D ++D M+R+ D YN + + R S A+ L +M
Sbjct: 327 GKVDEAFRLKDEMERLSTA----LPDVVTYNTL-VDACFKWRCSSDALRLLEEMRDKGVK 381
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P++ T N+V+ L E G A+ G+ D N L+ C+ GN+ AF +
Sbjct: 382 PTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTL 441
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+DE + + + T +T+++ LC+ E+A LL G D V++ +++ K
Sbjct: 442 MDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+ E ++L ++M + P+ ++Y ++ GL +R EA + + ++ + + P +
Sbjct: 502 EYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETT 561
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
Y +IH C + +E+ KMV+ F P ++V C T
Sbjct: 562 YNIIIHAYCKEGDLENAFRFHNKMVENSFKP------DVVTCNTL 600
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 36/245 (14%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ T+N ++ L + E + G+ D NI++ C+ G+LE AF
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRF 581
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
++ + + +P+V T +TLM+GLC G +++A L E +G D +T+N LI + K
Sbjct: 582 HNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK 641
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI---------- 330
G V+ + + M+ KG P++ +Y VL L + R EA ++ ++
Sbjct: 642 VGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFA 701
Query: 331 CERMSPS--------------------------FVSYKKLIHGLCNQKLVEDVDWVLKKM 364
C + PS +Y + ++GLC +++ VL +M
Sbjct: 702 CPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEM 761
Query: 365 VQQGF 369
+Q+G
Sbjct: 762 MQKGM 766
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 7/218 (3%)
Query: 161 PSVKTFNLVLNLLV--SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
PS++ N VL+ L + L ++ S +L + + N+L+ C G L A
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADAL 228
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
L P+ TY+TL++ C KG + EA LL RM+ +GI T+N L+S
Sbjct: 229 ATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAF 288
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS--- 335
+ G +++ K++E M G P+ +Y + GL + EA L M ER+S
Sbjct: 289 ARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEM--ERLSTAL 346
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
P V+Y L+ + D +L++M +G P +
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 125/307 (40%), Gaps = 19/307 (6%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
W ++ L++ +RD K P + +++ L + + + +
Sbjct: 362 WRCSSDALRLLEEMRD--------------KGVKPTLVTHNIVVKSLCKEGKLEEALGKL 407
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
++I E L D YN + AG ++KA + +M T N VL L
Sbjct: 408 EKIAEEGLA--PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC 465
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
K Y + + + S + G D ++ + N E A + D+ ++ P++
Sbjct: 466 KMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS 525
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TY+TL+ GLC ++EA L + +G+ D T+NI+I K+G +E + +M
Sbjct: 526 TYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKM 585
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
P+ + ++ GL + +A +L + + ++Y LI +C V
Sbjct: 586 VENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK---V 642
Query: 355 EDVDWVL 361
DVD L
Sbjct: 643 GDVDTAL 649
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 1/158 (0%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN + G + A+ DM P T+N+VL+ L A E +
Sbjct: 628 DVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNML 687
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN-VRTYSTLMHGLCE 245
A G + +L + +++ + + + N + TY ++GLC
Sbjct: 688 HKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCT 747
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283
G ++EA +L+ M +G+ D+ T+ L+ GL K+ K
Sbjct: 748 GGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P +YT++I L R E + + ++ + + + YN + + KA+
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGM--LPNLYTYNTMMDGYCKIAHVKKAL 283
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E +M P+V TF ++++ L + A GV + N L+ G
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ GNL A + E K P+V TYS L+ GLC +EEA GLL+ M+ +G +
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N LI G K+G +E+ +++ +M KG PN ++ ++ G + A L
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + + P V+Y LI G ++ + K+M + G P
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 152/361 (42%), Gaps = 59/361 (16%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM-------QRIKVEKLC---- 123
+ + + S+R D N LY+ II+ L AK + +M Q + ++C
Sbjct: 54 LELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVF 113
Query: 124 ---------RFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+F+ F +I + M G + +A+ + M + P+++ N+VL+ LV
Sbjct: 114 NVLSRLESSKFTPNVFGVLIIAFSEM-GLVEEALWVYYKM---DVLPAMQACNMVLDGLV 169
Query: 175 SA-------KLYGEI--QGIYTSAAKLGVEIDACC------------------------- 200
K+YG++ +G + G ID CC
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229
Query: 201 -LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
IL++GLC + A + PN+ TY+T+M G C+ +V++A L + M
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+G+ + VTF ILI GL K ++ K L M G PN Y ++ G
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA L + + P +Y LI GLC +E+ D +L++M ++GF+P + +
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409
Query: 380 V 380
+
Sbjct: 410 I 410
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 113/238 (47%), Gaps = 7/238 (2%)
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIET------LFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
DG NV+ +G + + K E L DM S+ P++ +N +++ A
Sbjct: 290 LGDGLLPNVVT-FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
E +++ K + D +IL+KGLC +E A +L E K+ PN TY+T
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+ G C++GN+E+A + +M +GI+ + +TF+ LI G K GK+E M L M KG
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
P+ +Y ++ G EA L M + P+ + LI GLC + D
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 2/237 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + ++I+ L + + + I + + F YN + AG +S+A+
Sbjct: 296 PNVVTFGILIDGLCKTDEMVSARKFL--IDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
++ + P V T+++++ L E G+ K G +A N L+ G
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ GN+E A V + ++ EPN+ T+STL+ G C+ G +E A GL M +G+ D
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
V + LI G K G +E +L + M+ G +PN + ++ GL R +A +L
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 9/292 (3%)
Query: 83 KRKDYNP---NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
KR+ +P + A+ L+ ++ FDA+ D + L S F + + +
Sbjct: 102 KRRLRSPLLYSRAVSVLLASEPDAVAMFDALADA----RAAGLPAPSAAF--RALVLAHS 155
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
AGR +A+E M ++C P+ +N V +LV + +Y G ++
Sbjct: 156 SAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNST 215
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+L+ GLC+ G A + DE ++ P+V+ Y+ L+ LC +G +E+A LL M
Sbjct: 216 TYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSM 275
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ G D VT+ + +SGL K G+V+E E ++ G Y ++ GL RF
Sbjct: 276 KENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRF 335
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E M+ + +SP Y LI +D +L +M +GFVP
Sbjct: 336 DEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVP 387
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 131/300 (43%), Gaps = 15/300 (5%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ +I+ L QA RFD E + ++ D Y ++ AGR A L +
Sbjct: 322 YSCLIDGLFQAGRFD--EGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDE 379
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P +N +L L Q + + + V +D+ NI++ GLC+ G
Sbjct: 380 MKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGL 439
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-----------SE 262
++ A V DE + C P V TY+ L+ GL G +EEA L +ME +
Sbjct: 440 IDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTL 499
Query: 263 GIDA--DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G + DT + L+ G+ + G+V + KLL + G P+ +Y ++ GL K
Sbjct: 500 GANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLD 559
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A L + + +SP ++Y LI GL D + + +++ G P + ++ ++
Sbjct: 560 GALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMM 619
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 134/305 (43%), Gaps = 15/305 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +YT++++ L R + ++ +K E C D Y V AGR+ +A
Sbjct: 247 PDVKIYTVLLSSLCNEGRIEDAGRLLCSMK-ENGCP-PDEVTYTVFLSGLCKAGRVDEAF 304
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + ++ +++ L A + E YT + D IL++
Sbjct: 305 HRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRF 364
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
E G + AF +LDE + P+ Y+TL+ L + GN++ A L+ M + D+
Sbjct: 365 AEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDS 424
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T NI+I GL K+G +++ M++ + M GC+P +Y ++ GL EA+ L +
Sbjct: 425 TTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHK 484
Query: 329 MICERMSPSFV-------------SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
M F+ S +KL+ G+C V +L+ +++ G VP +
Sbjct: 485 MEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVT 544
Query: 376 WREIV 380
+ ++
Sbjct: 545 YNTLI 549
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 134/327 (40%), Gaps = 38/327 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ A L++ + + +A+E + + CR F YN + G I A+
Sbjct: 143 PSAAFRALVLAHSSAGRHQEAVEAFSRMGDFD--CR-PTAFVYNAVFQVLVDRGVILLAL 199
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M S C P+ T+ ++++ L + + ++ + G+ D +LL L
Sbjct: 200 ALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSL 259
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G +E A +L + C P+ TY+ + GLC+ G V+EAF E ++ G
Sbjct: 260 CNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGL 319
Query: 269 VTFNILISGLRKQGKVEEGMK-----------------------------------LLER 293
+ ++ LI GL + G+ +EG+ LL+
Sbjct: 320 IGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDE 379
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
MK KG P++ Y +L L D A+ L+ M+ + ++ +I GLC + L
Sbjct: 380 MKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGL 439
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ V +M + G P + + ++
Sbjct: 440 IDKAMQVFDEMGEHGCHPTVMTYNALI 466
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 15/256 (5%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K + P+ Y ++ L D + +M + + D +N++ G
Sbjct: 381 KDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNV--VLDSTTHNIMICGLCKKG 438
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA-----------K 191
I KA++ +M + C P+V T+N +++ L A + E + ++
Sbjct: 439 LIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLT 498
Query: 192 LGVEI--DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
LG D L L+ G+C++G + A+ +L + P+V TY+TL++GLC+ N+
Sbjct: 499 LGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNL 558
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+ A L + ++ +GI D +T+ LI GL + + + L + + G +P+ Y +
Sbjct: 559 DGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTM 618
Query: 310 LYGLLDKKRFPEAKEL 325
+ L K+ +A L
Sbjct: 619 MRSLCRMKKLSQAINL 634
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%)
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
+PS+KT N +L+ LV A ++ GV D + ++ C G ++ A
Sbjct: 159 FPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIE 218
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + K PNV TY+ ++HGLC+ G ++EAF E+ME E + VT+ +LI+GL
Sbjct: 219 LFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLV 278
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K + +E +L+ M +G PN+ Y ++ G A ++ MI +SP+ V
Sbjct: 279 KLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSV 338
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ LI G C +E + +L++M+ G V G + ++
Sbjct: 339 TCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVI 379
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 2/292 (0%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N+ +T +I++L RFD+ + + + + +DG ++ G+ S+AIE
Sbjct: 371 NQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNF-KPNDGLLTLLVSGLCQ-NGKQSEAIE 428
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+ + + T N +++ L A E + + G+ +D+ N L+ C
Sbjct: 429 LWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACC 488
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G +E F + +E ++ +P++ TY+ L+HGLC G +EEA GL + G D
Sbjct: 489 KEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAY 548
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+ I+I G K +VEEG KL + M N+ Y ++ + EA L M
Sbjct: 549 TYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDM 608
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ + +Y LIHGL N LV+ + +L +M ++G P + + ++G
Sbjct: 609 RSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIG 660
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 137/320 (42%), Gaps = 33/320 (10%)
Query: 85 KDYNPNEALYTLIINKLAQ-AKRFDAIE-------------DIMQRIKVEKLCRFS---- 126
+++ PN+ L TL+++ L Q K+ +AIE + + LC
Sbjct: 401 RNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEE 460
Query: 127 ---------------DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
D YN + + G++ + + +M P + T+N++L+
Sbjct: 461 AAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLH 520
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L + E G++ K G DA I++ G C+ +E + E E
Sbjct: 521 GLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQ 580
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N Y TL+ CE GN+ EAF L + M S GI + T++ LI GL G V+ +LL
Sbjct: 581 NAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLL 640
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ M+ +G PN Y ++ G + + ++ M + P+ ++Y +I+G C
Sbjct: 641 DEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKL 700
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
++ +L +M Q+G VP
Sbjct: 701 GNMKAAAKLLNEMAQKGIVP 720
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 136/312 (43%), Gaps = 37/312 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++IN L + +RFD I++ + + YN + G IS A+
Sbjct: 265 PSLVTYGVLINGLVKLERFDEANCILKEMSDRGYA--PNNVVYNTLIDGYCRIGNISTAL 322
Query: 149 ETLFDMPSYNCWPSVKTFNLVL-------------NLLVSAKLYGEI--QGIYTSAAK-- 191
+ DM S P+ T N ++ +LL G + QG +TS
Sbjct: 323 QIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRL 382
Query: 192 -LGVEIDAC-----------------CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
L D+ L +L+ GLC+NG A + ++ N
Sbjct: 383 CLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANT 442
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
T + L+HGLCE G+ EEA LL+ M G+ D++++N LI K+GKVEEG KL E
Sbjct: 443 VTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEE 502
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M +G P+ +Y +L+GL + + EA L P +Y +I G C
Sbjct: 503 MVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANR 562
Query: 354 VEDVDWVLKKMV 365
VE+ + + ++MV
Sbjct: 563 VEEGEKLFQEMV 574
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 4/283 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKA 147
P+ L++ ++N R D ++ + K+EK+ + YN I I+G GR+ +A
Sbjct: 195 PDVYLFSTMVNAFCTGGRVDDAIELFR--KMEKVGVAPNVVTYNNI-IHGLCKNGRLDEA 251
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ M PS+ T+ +++N LV + + E I + G + N L+ G
Sbjct: 252 FQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDG 311
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C GN+ A + D+ PN T ++L+ G C+ +E A LLE M + G +
Sbjct: 312 YCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVIN 371
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TF +I L + + + + + M + PN ++ GL + EA EL
Sbjct: 372 QGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWY 431
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
R++ + + + V+ LIHGLC E+ +LK+M+++G V
Sbjct: 432 RLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLV 474
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 4/244 (1%)
Query: 127 DGFFYNVIKIYG--NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
D + YN++ ++G NM G+I +A + +P T+ ++++ A E +
Sbjct: 511 DMYTYNML-LHGLCNM-GKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEK 568
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
++ + +E +A L++ CENGN+ AF + D+ + TYS+L+HGL
Sbjct: 569 LFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLS 628
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
G V+ A LL+ M EG+ + V + LI G K G++ + +L+ M +PN
Sbjct: 629 NIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKI 688
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ G A +L+ M + + P V+Y L +G C + +E+ V M
Sbjct: 689 TYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLM 748
Query: 365 VQQG 368
G
Sbjct: 749 STGG 752
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%)
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+G + +++ A G+ N LL L + ++ ++ V D P+V +ST
Sbjct: 143 FGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFST 202
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
+++ C G V++A L +ME G+ + VT+N +I GL K G+++E + E+M+ +
Sbjct: 203 MVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKER 262
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
P+ +Y ++ GL+ +RF EA ++ M +P+ V Y LI G C +
Sbjct: 263 VKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTAL 322
Query: 359 WVLKKMVQQGFVP 371
+ M+ G P
Sbjct: 323 QIRDDMISNGISP 335
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 2/230 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+ P+ Y ++I+ +A R + E + Q + K+ + + + +I+ Y G
Sbjct: 539 KKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQ-NAVVYGTLIRAYCE-NG 596
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ +A DM S + T++ +++ L + L + K G+ + C
Sbjct: 597 NMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYT 656
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G + +L E N PN TY+ +++G C+ GN++ A LL M +
Sbjct: 657 ALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQK 716
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
GI D VT+N L +G K+GK+EE +K+ + M G + +Y ++ G
Sbjct: 717 GIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A + L +M P+V + ++ ++ I + V +
Sbjct: 631 GLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITY 690
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
I++ G C+ GN++AA +L+E ++ P+ TY+ L +G C++G +EEA + + M +
Sbjct: 691 TIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMST 750
Query: 262 EGIDADTVTFNILISGLRK 280
GI D +T+ LI G K
Sbjct: 751 GGISLDDITYTTLIDGWHK 769
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%)
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
F L + ++G+ T N L+S L K +V+ ++ + M G P+ + ++
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVN 205
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
R +A EL +M ++P+ V+Y +IHGLC +++ +KM ++ P
Sbjct: 206 AFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKP 265
Query: 372 RM 373
+
Sbjct: 266 SL 267
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 132/281 (46%), Gaps = 4/281 (1%)
Query: 93 LYTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET 150
+YTL ++N L + ++F+ + + ++ + + F+D YN + G + +A +
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGV--FADIVTYNTLINAYCREGLVEEAFQL 314
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
L S P + T+N +L L Y + + +LG+ +A N LL +C
Sbjct: 315 LNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICR 374
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
N+ A + DE ++ P++ ++S+L+ L G++ +A ME GI D V
Sbjct: 375 RDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVI 434
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ ILI G + G + + +K+ + M +GC+ + +Y L GL KK F +A L M+
Sbjct: 435 YTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV 494
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M P F ++ LI G C ++ + + MV+ P
Sbjct: 495 ERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKP 535
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 138/298 (46%), Gaps = 5/298 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+LN +S R P Y I+ L + ++D +D++ I++ +L + YN + +
Sbjct: 314 LLNSFSSR-GMEPGLLTYNAILYGLCKIGKYDRAKDVL--IEMLQLGLTPNAATYNTLLV 370
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-SAKLYGEIQGIYTSAAKLGVE 195
I +A E +M P + +F+ ++ +L + LY + + + G+
Sbjct: 371 EICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH-FREMERSGIV 429
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D IL+ G C NG L A + DE + C +V TY+T ++GLC+K +A L
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
M G+ D TF LI G K G +++ + L E M P+ +Y ++ G
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
AKEL MI + + P +SY +++G C+ L+ + + +M+++G P +
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 2/278 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y +N L + K F A D++ VE+ F +I+ Y G + KA+
Sbjct: 470 YNTFLNGLCKKKMF-ADADMLFNEMVERGMVPDFYTFTTLIRGYCK-DGNMDKALNLFEA 527
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M N P T+N +++ A G + ++ + + D +L G C +G
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L A + D+ ++ PN+ T +TL+ G C G++ +A+ L +M S GI D+ ++N
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+ +E+ L+ M+ +G N +Y +L G + + EA++++ +MI
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++P +Y LI+G +Q +++ +M+Q+G VP
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 147/332 (44%), Gaps = 37/332 (11%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ P+ ++ +I LA+ + +M ++E+ D Y ++ G
Sbjct: 390 RRGVLPDLVSFSSLIGVLARNGHL--YQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+S A++ +M + C+ V T+N LN L K++ + ++ + G+ D
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN--------------- 248
L++G C++GN++ A + + + N +P+ TY+TL+ G C+ G
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 249 --------------------VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
+ EA L ++M +GI + VT N LI G + G + +
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ L +M G P+S SY ++ G L + +A L+ M + + ++Y +++G
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C + +++ + VL+KM++ G P + ++
Sbjct: 688 CAEGKMQEAEQVLRKMIEIGINPDGATYSSLI 719
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 146 KAIETLFDMPSYNCWPSVK-TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
K +E+L Y + SV ++L++ V AK E + + GV + N L
Sbjct: 171 KVVESLISTCFY--FGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKL 228
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GL G ++ A+ + E + E NV T + +++ LC+ E L ME +G+
Sbjct: 229 LGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGV 288
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
AD VT+N LI+ ++G VEE +LL +G P +Y +LYGL ++ AK+
Sbjct: 289 FADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKD 348
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
++ M+ ++P+ +Y L+ +C + + + + +M ++G +P + + ++G +
Sbjct: 349 VLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLA 408
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + G+E++ LNI++ LC++ E + L + + ++ TY+TL++ C
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+G VEEAF LL S G++ +T+N ++ GL K GK + +L M G PN+A
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y +L + + EA+E+ M + P VS+ LI L + ++M
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423
Query: 365 VQQGFVP 371
+ G VP
Sbjct: 424 ERSGIVP 430
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 35/197 (17%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + +A E DM + P ++ VLN S+ L E + + G+ +
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Query: 201 LNILLKGLCENG-----------------------------------NLEAAFYVLDEFP 225
N L+KG C +G NLE AF +++E
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEME 669
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
K+ + N+ TY+ +++G C +G ++EA +L +M GI+ D T++ LI+G Q ++
Sbjct: 670 KRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMK 729
Query: 286 EGMKLLERMKGKGCYPN 302
E + + M +G P+
Sbjct: 730 EAFRFHDEMLQRGLVPD 746
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 145/296 (48%), Gaps = 2/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +P+ YT +I Q + +++ + + + + + + +I +Y AG +
Sbjct: 392 KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM-ISRGLKPDEVTYTTLIDVYCK-AGEM 449
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A +M P++ T+ +++ L + K G++++ C N +
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM 509
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G+C+ GN+E A ++ E +P+ TY+T++ C G++++A LL+ M G+
Sbjct: 510 VNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
VTFN+L++G G +E+G +LL M KG P++ +Y ++ + +
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ RM + ++P +Y LI G C + +++ ++ K+M+++G+VP + + ++
Sbjct: 630 IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALI 685
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 121/248 (48%), Gaps = 13/248 (5%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D FF +++I G +S+A + L + SY +V + N L +++ +GI
Sbjct: 194 DIFFQVLVEI-----GHLSEARKLLDKLLSYGLVVTVDSCNAFL-----SRIANNSEGIE 243
Query: 187 TSA---AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ + G+ + NI++ LC G ++ A +L + ++ P+V +YST++ G
Sbjct: 244 MAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY 303
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C G +++A L++ M+ +G+ + T+N +I L K GK E K+L M + P++
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
Y +++G A + M+ +++SP +++Y LI G V + + +
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423
Query: 364 MVQQGFVP 371
M+ +G P
Sbjct: 424 MISRGLKP 431
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 111/253 (43%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN+I G++ +A L M + P V +++ V++ + +
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ 320
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G++ + N ++ LC+ G A VL E Q P+ Y+TL+HG + G+V
Sbjct: 321 IKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVR 380
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A + M S+ I D +T+ LI G + GKV E L M +G P+ +Y ++
Sbjct: 381 TANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLI 440
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
A L M+ M+P+ V+Y LI GLC ++ + +L +M ++G
Sbjct: 441 DVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500
Query: 371 PRMGMWREIVGCV 383
+ ++ +V +
Sbjct: 501 LNVCIYNSMVNGI 513
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 97/230 (42%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + KA++ + DM P+ T+N ++ LL E + + + D
Sbjct: 307 GELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVY 366
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G + G++ A DE + P+ TY+TL+ G + G V E L M S
Sbjct: 367 TTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS 426
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D VT+ LI K G++ L M G PN +Y ++ GL
Sbjct: 427 RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDT 486
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A EL+ M + + + Y +++G+C +E ++K+M G P
Sbjct: 487 ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP 536
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 4/225 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMA 141
++K N +Y ++N + +A + +M+ ++V + D Y VI Y +
Sbjct: 495 RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID--PDAITYTTVIDAYCRL- 551
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G I KA + L +M P+V TFN+++N + + + + G+ DA
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+K C ++ + Q P+ TY+ L+ G C+ N++EA+ L + M
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+G ++N LI K+ K+ E +L E M+G G + Y
Sbjct: 672 KGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIY 716
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 4/151 (2%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK-VEEGMK 289
PN + L E G++ EA LL+++ S G+ + N +S + + +E +K
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+ G N+ SY ++Y L + EA L+ +M +P VSY +I G C
Sbjct: 248 VFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++ ++ M +G P + I+
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSII 335
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 3/290 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K Y ++T ++ L KR +I+ R E C F YN++ R
Sbjct: 126 KKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGC-APHVFSYNILLKGLCHESR 184
Query: 144 ISKAIETLFDMP--SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+A+E L M +C P V +++ +++ L + Y + G+ D
Sbjct: 185 SQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTY 244
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ LC+ ++ A VL+ K P+ TY++++HG C G +EA G+LE+M S
Sbjct: 245 NTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCS 304
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G++ D VT+ L+ L K G+ E K+L+ M +G PN +Y +L+G K E
Sbjct: 305 DGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVE 364
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++L+ M+ + P + LI + V+ +V KM QQ P
Sbjct: 365 MRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTP 414
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 11/261 (4%)
Query: 121 KLCRFSDGFFYNVIKIYGNM------AGRISKAIETLFDM--PSYNCWPSVKTFNLVLNL 172
++ R SDG + YG + AGR+ L ++ Y P + T L+ +L
Sbjct: 85 RMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFT-PLLKSL 143
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ--NCE 230
+ + + +LG NILLKGLC + A +L +C
Sbjct: 144 CAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCP 203
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P+V +YST++ GL ++G+ ++A+ M GI D VT+N +++ L K +++ M +
Sbjct: 204 PDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDV 263
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L RM G P+ +Y +++G + EA ++ +M + + P V+Y L+ LC
Sbjct: 264 LNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCK 323
Query: 351 QKLVEDVDWVLKKMVQQGFVP 371
+ +L M+++G P
Sbjct: 324 NGRCIEARKILDSMIKRGLKP 344
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 107/241 (44%), Gaps = 10/241 (4%)
Query: 86 DYNPNEALYTLIINKLAQA----KRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
D P+ Y+ II+ L + K + ++++R D YN I A
Sbjct: 201 DCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGI------LPDVVTYNTIVAALCKA 254
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ KA++ L M P T+N +++ S+ E GI GVE DA
Sbjct: 255 QAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTY 314
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ LC+NG A +LD K+ +PNV TYSTL+HG KG + E LL+ M
Sbjct: 315 TSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVR 374
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
GI D F+ILI K V+ M + +M+ + P+ +Y ++ GL R +
Sbjct: 375 NGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDD 434
Query: 322 A 322
A
Sbjct: 435 A 435
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL-LERME 260
IL+ C G L+ F L K+ ++ L+ LC + A + L RM
Sbjct: 102 GILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMT 161
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG--CYPNSASYQEVLYGLLDKKR 318
G ++NIL+ GL + + +E ++LL M G C P+ SY ++ GL +
Sbjct: 162 ELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGD 221
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
+A M+ + P V+Y ++ LC + ++ VL +MV+ G +P +
Sbjct: 222 SDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNS 281
Query: 379 IV 380
IV
Sbjct: 282 IV 283
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 11/247 (4%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK-------LYGEIQGIYTSAAKLG 193
+G + +A +T +M S N PS + FN +++ + +K L+ ++ +
Sbjct: 279 SGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPN 338
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+E NI++ LC+ L+ A +++E P+V TYS L+ GLC+ G ++ A
Sbjct: 339 LET----YNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRAC 394
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
LLE M EG+ D+ T +++ L K GKV+ + LE MK +G P+ +Y +L GL
Sbjct: 395 DLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGL 454
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
R EA + +M+ + +P SY +I LC + ++MV++G +P
Sbjct: 455 CKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDT 514
Query: 374 GMWREIV 380
++ ++
Sbjct: 515 VLYHSLL 521
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + C P+++T+N++++ L AK E Q + A G+ D + L+ GLC+ G
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A +L+E K+ P+ T +++++ L + G V+ A LE M++ G D VT+N
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ GL K G+++E + L +M C P+ SY ++ L + A + M+
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDV------------DWVLKKMVQQGF 369
+ P V Y L+ GL L ED+ D+V+ KMV G
Sbjct: 510 VLPDTVLYHSLLDGLARNGL-EDLALELLKTSLCKPDFVMHKMVLDGL 556
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 144/325 (44%), Gaps = 22/325 (6%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
T V ++ +L +++ + + ++K Y + Y ++ LA+A + Q++
Sbjct: 6 TVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM- 64
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
++ D F Y+++ AG + KA E L + +V T+++V++ A
Sbjct: 65 -QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASR 123
Query: 179 YGEIQGIY-TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
+ I+ T ++ G D N LLKGLC + AF + + K CEPNV +YS
Sbjct: 124 VDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYS 183
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
TL+ GLC+ G ++EA L E M + D V + ++GL K +V E +M K
Sbjct: 184 TLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK 243
Query: 298 GCYPNSASYQEVLYGLLDKK------------------RFPEAKELVGRMICERMSPSFV 339
G ++ ++ V+ G+L KK EA + MI PS
Sbjct: 244 GSKADAVAFSTVI-GILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAE 302
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKM 364
+ LIH +C K + D + ++M
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRM 327
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 1/221 (0%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
SV T+N L+ L A + + G D +I+L+GLC+ G L+ A +L
Sbjct: 37 SVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELL 96
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-IDADTVTFNILISGLRK 280
+ + + NV TYS ++ G C+ V++A + + M S G D VTFN L+ GL
Sbjct: 97 GQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCS 156
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
++ E L E M GC PN SY +L GL R EA L M+ + P V+
Sbjct: 157 GERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVA 216
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
Y + GLC V + +KMV +G + ++G
Sbjct: 217 YTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 133/342 (38%), Gaps = 58/342 (16%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL +Y + PN Y+ +++ L +A R D + + + VEK C D Y
Sbjct: 165 VLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEM-VEKSC-VPDLVAYTSFVT 222
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
A R+++A + M + F+ V+ +L E Q
Sbjct: 223 GLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ------------- 269
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
N +++ LC +G L+ A +E +N P+ ++TL+H +C+ + + L
Sbjct: 270 -----NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLF 324
Query: 257 ERMESE--------------------------------------GIDADTVTFNILISGL 278
+RM+S G+ D VT++ L+ GL
Sbjct: 325 QRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGL 384
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K GK++ LLE M +G +P+S + +L L + A + M +P
Sbjct: 385 CKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDL 444
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+Y L+ GLC +++ L KMV P + + I+
Sbjct: 445 VTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIII 486
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G T+N + L K + + ++M+ +G P+ +Y VL GL +
Sbjct: 32 KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDK 91
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
AKEL+G++ + + ++Y +I G C V+D + K M G
Sbjct: 92 AKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGG 138
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 125/293 (42%), Gaps = 38/293 (12%)
Query: 131 YN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN VI G ++A E +M P TFN +L + L+ + +++
Sbjct: 258 YNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEM 317
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G+E D N LL +C+ G ++ AF ++ E P+++ PNV TYST++ G + G +
Sbjct: 318 LYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRL 377
Query: 250 EEAFGLL-----------------------------------ERMESEGIDADTVTFNIL 274
+EA L + MES GI D VT+N L
Sbjct: 378 DEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNAL 437
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
+ G KQGK EE ++ E MK + +PN +Y ++ + EA E+ +
Sbjct: 438 LGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGL 497
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
V Y LI LC LVE L +M ++G P + + I+ FG+
Sbjct: 498 KADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDA--FGR 548
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 162/378 (42%), Gaps = 20/378 (5%)
Query: 27 RKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKD 86
R +T A A +++ +++ HA + D + +L S L +L + R +
Sbjct: 104 RPKTAAAARHTSTAEEALRHAIRFASDDKGIDSVLLNFESRLCGSDDYTFLLRELGNRGE 163
Query: 87 YNPNEALYTLIINKLA----QAKRFDAIEDIMQRIKVEKLCR------FSDGF------F 130
+ + + + Q K A+ I+ R+ +L + ++G+ F
Sbjct: 164 WAKAIRCFEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFETALNEGYGNTVYAF 223
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL-YGEIQGIYTSA 189
+I YG +G +AI+ M S P++ T+N V++ + + I+
Sbjct: 224 SALISAYGR-SGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEM 282
Query: 190 AKLGVEIDACCLNILLKGLCENGNL-EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ GV+ D N LL +C G L EAA + E + E ++ TY+TL+ +C+ G
Sbjct: 283 LRNGVQPDRITFNSLL-AVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQ 341
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
++ AF ++ M + I + VT++ +I G K G+++E + L MK + SY
Sbjct: 342 MDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNT 401
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+L RF EA + M + V+Y L+ G Q E+V V ++M +
Sbjct: 402 LLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAER 461
Query: 369 FVPRMGMWREIVGCVTFG 386
P + + ++ + G
Sbjct: 462 IFPNLLTYSTLIDVYSKG 479
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 4/203 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAG 142
RK PN Y+ +I+ A+A R D ++ +K + D YN ++ IY + G
Sbjct: 354 RKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGL--DRVSYNTLLSIYAKL-G 410
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R +A+ +M S T+N +L Y E++ ++ + + +
Sbjct: 411 RFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYS 470
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ + G + A V EF K + +V YS L+ LC+ G VE A L+ M E
Sbjct: 471 TLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKE 530
Query: 263 GIDADTVTFNILISGLRKQGKVE 285
GI + VT+N +I + G E
Sbjct: 531 GIRPNVVTYNSIIDAFGRSGSAE 553
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 145/296 (48%), Gaps = 2/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +P+ YT +I Q + +++ + + + + + + +I +Y AG +
Sbjct: 392 KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM-ISRGLKPDEVTYTTLIDVYCK-AGEM 449
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A +M P++ T+ +++ L + K G++++ C N +
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM 509
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G+C+ GN+E A ++ E +P+ TY+T++ C G++++A LL+ M G+
Sbjct: 510 VNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
VTFN+L++G G +E+G +LL M KG P++ +Y ++ + +
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ RM + ++P +Y LI G C + +++ ++ K+M+++G+VP + + ++
Sbjct: 630 IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALI 685
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 121/248 (48%), Gaps = 13/248 (5%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D FF +++I G +S+A + L + SY +V + N L +++ +GI
Sbjct: 194 DIFFQVLVEI-----GHLSEARKLLDKLLSYGLVVTVDSCNAFL-----SRIANNSEGIE 243
Query: 187 TSA---AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ + G+ + NI++ LC G ++ A +L + ++ P+V +YST++ G
Sbjct: 244 MAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY 303
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C G +++A L++ M+ +G+ + T+N +I L K GK E K+L M + P++
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
Y +++G A + M+ +++SP +++Y LI G V + + +
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423
Query: 364 MVQQGFVP 371
M+ +G P
Sbjct: 424 MISRGLKP 431
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 111/253 (43%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN+I G++ +A L M + P V +++ V++ + +
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ 320
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G++ + N ++ LC+ G A VL E Q P+ Y+TL+HG + G+V
Sbjct: 321 IKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVR 380
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A + M S+ I D +T+ LI G + GKV E L M +G P+ +Y ++
Sbjct: 381 TANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLI 440
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
A L M+ M+P+ V+Y LI GLC ++ + +L +M ++G
Sbjct: 441 DVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500
Query: 371 PRMGMWREIVGCV 383
+ ++ +V +
Sbjct: 501 LNVCIYNSMVNGI 513
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 97/230 (42%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + KA++ + DM P+ T+N ++ LL E + + + D
Sbjct: 307 GELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVY 366
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G + G++ A DE + P+ TY+TL+ G + G V E L M S
Sbjct: 367 TTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS 426
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D VT+ LI K G++ L M G PN +Y ++ GL
Sbjct: 427 RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDT 486
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A EL+ M + + + Y +++G+C +E ++K+M G P
Sbjct: 487 ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP 536
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 4/225 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMA 141
++K N +Y ++N + +A + +M+ ++V + D Y VI Y +
Sbjct: 495 RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID--PDAITYTTVIDAYCRL- 551
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G I KA + L +M P+V TFN+++N + + + + G+ DA
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+K C ++ + Q P+ TY+ L+ G C+ N++EA+ L + M
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+G ++N LI K+ K E +L E M+G G + Y
Sbjct: 672 KGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIY 716
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 4/151 (2%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK-VEEGMK 289
PN + L E G++ EA LL+++ S G+ + N +S + + +E +K
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+ G N+ SY ++Y L + EA L+ +M +P VSY +I G C
Sbjct: 248 VFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++ ++ M +G P + I+
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSII 335
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 140/310 (45%), Gaps = 17/310 (5%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN-------MAGRISK 146
Y +I+ L + F + ++Q + K + F +++ G +G I+
Sbjct: 22 YCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITA 81
Query: 147 AIETLFDMPSYNC---------WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+E+ F + C W T VL L+ K + + G Y + G
Sbjct: 82 YLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPAS 141
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
NIL+ C++G++ A V D K P+ +Y+TLM+G G ++E F L
Sbjct: 142 LYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKS 201
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M + G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G
Sbjct: 202 AMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNG 261
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
R A E+ +M+ + + P ++Y LI+GLC + ++ ++ M ++G P +
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYT 321
Query: 378 EIV-GCVTFG 386
++ GC G
Sbjct: 322 TLIDGCCKEG 331
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 128/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PS ++N ++N + + E + +
Sbjct: 143 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKS 201
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GL + ++ A + DE + PN T++TL+ G C+ G
Sbjct: 202 AMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNG 261
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYT 321
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V Y LI GLC + D + +L++M+
Sbjct: 322 TLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSV 381
Query: 368 GFVPRMGMWREIV 380
G P G + I+
Sbjct: 382 GLNPDTGTYTMII 394
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 111/211 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 210 PDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G K
Sbjct: 270 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCK 329
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + Y ++ GL + R +A++++ M+ ++P +
Sbjct: 330 EGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGT 389
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L++ + D +++ + V+ L +G + + GR+ A
Sbjct: 209 QPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLV--PNGVTFTTLIDGHCKNGRVDLA 266
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 267 MEIYKQMLSQSLLPDLITYN-----------------------------------TLIYG 291
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ A ++D+ ++ +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 292 LCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLD 351
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G P++ +Y ++ K + +L+
Sbjct: 352 DVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLK 411
Query: 328 RMICERMSPSFVSYKKLIHG 347
M + PS V+Y L++G
Sbjct: 412 EMQRDGHVPSVVTYNVLMNG 431
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 26/303 (8%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y L++ F+ I +K + YN+ + +G++ +A
Sbjct: 295 PNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRS---YNIWMLGLVRSGKLLEAH 351
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +M N P++ ++N++++ L ++ + + I + GV D + LL G
Sbjct: 352 LILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGY 411
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G + A YVL E + C PN+ T + L+H L ++G EA LL+ M G D
Sbjct: 412 CRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDN 471
Query: 269 VTFNILISGLRKQGKVEEGMKLLERM-----------------------KGKGCYPNSAS 305
VT N +I+GL K G +++ ++++ M GK C P+S +
Sbjct: 472 VTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSIT 531
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ GL R EAK+ + MI +++SP + + I+ C Q + VLK+M
Sbjct: 532 YATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEME 591
Query: 366 QQG 368
++G
Sbjct: 592 KKG 594
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 180/418 (43%), Gaps = 70/418 (16%)
Query: 18 SLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPT---------------EVL 62
SL S I R A P H H H+D+ P+ +
Sbjct: 45 SLQSVPAIARILITAKMHPQIDHL---HQLLLSQHRDFAHPSGFSLVRTLADLGLLENAI 101
Query: 63 KIFSNLRD-------PISVISVLNQYSKRKD----------------YNPNEALYTLIIN 99
F +LRD PIS ++L + S ++ P + L+I+
Sbjct: 102 SQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLIS 161
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
L + + ++ ++ EK C+ ++ +++ Y AG S I+ L +M S
Sbjct: 162 ALCEMGYLENAREVFDKMS-EKGCKPNEFSLGILVRGYCR-AGLHSHGIDLLDEMRSSGA 219
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P+ +N V++ L E + + ++G+ D N + LC++G + A
Sbjct: 220 LPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASR 279
Query: 220 V-----LDE---FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT- 270
+ +DE PK PN TY+ ++ G C +G EEA + + M+ +++T++
Sbjct: 280 IFRDMQIDEEMGLPK----PNTVTYNLMLEGFCSEGMFEEARAIFDSMK----NSETLSL 331
Query: 271 --FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+NI + GL + GK+ E +L M K PN SY +++GL F +A+ ++G
Sbjct: 332 RSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGL 391
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM--------GMWRE 378
M ++P V+Y L+HG C + + + ++VL++M+Q G P M +W+E
Sbjct: 392 MRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKE 449
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 153/328 (46%), Gaps = 26/328 (7%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+LN+ ++ K+ PN Y ++++ L + F I+ ++ + D Y+ +
Sbjct: 353 ILNEMAE-KNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVA--PDTVTYSTLLH 409
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G+I +A L +M C+P++ T N++L+ L E + + + G +
Sbjct: 410 GYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGL 469
Query: 197 DACCLNILLKGLCENGNLEAAFYV-------------------LDEFPKQN----CEPNV 233
D N ++ GLC+ GNL+ A + +D F +N C P+
Sbjct: 470 DNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDS 529
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY+T++ GLC+ G V+EA L M + + D++ F+ I KQGK+ ++L+
Sbjct: 530 ITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKE 589
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M+ KGC + +Y ++ GL + + E L+ M + P+ +Y +I L
Sbjct: 590 MEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGK 649
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVG 381
++D +L +M+Q+G P + +R ++G
Sbjct: 650 LKDATCLLDEMLQKGISPNIYTFRILIG 677
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 23/292 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL--------CRFS----DGFFYNVIKI 136
PN Y +I+ L + E ++++++ L CR + G +I
Sbjct: 221 PNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRI 280
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ +M I+ +P P+ T+NL+L S ++ E + I+ S K +
Sbjct: 281 FRDMQ------IDEEMGLPK----PNTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETL 329
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
NI + GL +G L A +L+E ++N +PN+ +Y+ L+HGLC+ G +A +L
Sbjct: 330 SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSIL 389
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M G+ DTVT++ L+ G ++GK+ E +L M GC+PN + +L+ L +
Sbjct: 390 GLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKE 449
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
R EA++L+ M V+ +I+GLC ++ ++ M +G
Sbjct: 450 GRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRG 501
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 139/342 (40%), Gaps = 61/342 (17%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK--------------VEKLCRFSDGFFYNVI 134
PN ++++ L + R ED++Q + + LC+ G I
Sbjct: 434 PNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCK--AGNLDKAI 491
Query: 135 KIYGNMAGRISKAIETL-------FDMPSYN--CWPSVKTFNLVLNLLVSAKLYGEIQGI 185
+I M R S ++ L FD+ + C P T+ ++ L E +
Sbjct: 492 EIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKK 551
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ D+ + + C+ G L +AF VL E K+ C ++RTY++L+ GL
Sbjct: 552 LLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGS 611
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+ + E +GL++ M+ GI + T+N +IS L + GK+++ LL+ M KG PN +
Sbjct: 612 ENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYT 671
Query: 306 Y-----------------------------QEVLYG-----LLDKKRFPEAKELVGRMIC 331
+ +E LY LL +AKEL +
Sbjct: 672 FRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALD 731
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV--QQGFVP 371
++ Y+ LI LC ++D ++L KM+ Q F P
Sbjct: 732 RSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDP 773
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 102/241 (42%), Gaps = 37/241 (15%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYT-------------------SAAKLGVEIDACC- 200
PS+++ + +L++AK++ +I ++ + A LG+ +A
Sbjct: 44 PSLQSVPAIARILITAKMHPQIDHLHQLLLSQHRDFAHPSGFSLVRTLADLGLLENAISQ 103
Query: 201 -----------------LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
N+L + + ++ ++ + +P T++ L+ L
Sbjct: 104 FRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISAL 163
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
CE G +E A + ++M +G + + IL+ G + G G+ LL+ M+ G PN
Sbjct: 164 CEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNR 223
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y V+ L + + EA++LV +M +SP V++ I LC + + + +
Sbjct: 224 VAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRD 283
Query: 364 M 364
M
Sbjct: 284 M 284
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 127/325 (39%), Gaps = 45/325 (13%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS---DGF 129
S I + + + K P+ Y II L + R D + + + +KL S D F
Sbjct: 511 SFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTF 570
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN K G++S A L +M C S++T+N ++ L S EI G+
Sbjct: 571 IYNYCK-----QGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEM 625
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL---CEK 246
+ G+ + N ++ L E G L+ A +LDE ++ PN+ T+ L+ C+
Sbjct: 626 KERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDF 685
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISG----------------------------- 277
G +E F + + + FN L++G
Sbjct: 686 GAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLI 745
Query: 278 --LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
L K GK+++ +L +M K + AS+ V+ L + A E RM+
Sbjct: 746 EKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASE 805
Query: 336 PSFVSYK-KLIHGLCNQKLVEDVDW 359
F ++ K I G N ++ DW
Sbjct: 806 TDFNEHENKNIRGRLNNN--DESDW 828
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 148/292 (50%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +++ +A+ K+FD + + + K+++L + + YN++ +IS A+
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGE--KMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M PS+ T + +LN K + + ++G D L+ GL
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ A ++D ++ C+PN+ TY +++GLC++G+++ AF LL +ME+ I+A+
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V ++ +I L K ++ + L M+ KG PN +Y ++ L + +R+ +A L+
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI +++P+ V++ LI + + + + + +M+++ P + + ++
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 113/241 (46%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ AI M PS+ FN +L+ + K + + + +LG+ + N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C + A +L + K EP++ T S+L++G C + +A L+++M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G DT+TF LI GL K E + L++RM +GC PN +Y V+ GL + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ + V Y +I LC + +D + +M +G P + + ++ C
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 383 V 383
+
Sbjct: 305 L 305
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R S A L DM P+V TFN +++ V E + +Y K ++ D +
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C + L+ A ++ + ++C PNV TY+TL++G C+ ++E L M
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ +TVT+ LI G + + + ++M G +PN +Y +L GL + +A
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+ + +M P+ +Y +I G+C VED
Sbjct: 490 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 35/263 (13%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RIS A+ + M P TF +++ L E + + G + +
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+++ GLC+ G+++ AF +L++ E NV YST++ LC+ + ++A L ME++
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 263 G-----------------------------------IDADTVTFNILISGLRKQGKVEEG 287
G I+ + VTFN LI K+GK+ E
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
KL + M + P+ +Y ++ G R EAK + MI + P+ V+Y LI+G
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 348 LCNQKLVEDVDWVLKKMVQQGFV 370
C K +++ + ++M Q+G V
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLV 432
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 2/222 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ +P+ Y+ +IN R D + + + + + K C F + YN + A R
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE-LMISKDC-FPNVVTYNTLINGFCKAKR 415
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I + +E +M + T+ +++ A+ Q ++ GV + N
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC+NG LE A V + + EP + TY+ ++ G+C+ G VE+ + L + +G
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+ D + +N +ISG ++G EE L +M+ G P+S +
Sbjct: 536 VKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 2/294 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ +T +I+ L + ++ R+ V++ C+ + Y V+ G I
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQ-PNLVTYGVVVNGLCKRGDIDL 243
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M + +V ++ V++ L + + ++T GV + + L+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC A +L + ++ PNV T++ L+ ++G + EA L + M ID
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T++ LI+G +++E + E M K C+PN +Y ++ G KR E EL
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + + V+Y LIHG + ++ V K+MV G P + + ++
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 129/314 (41%), Gaps = 49/314 (15%)
Query: 73 SVISVLNQYSKRKD------------YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
S+IS L Y + D NPN + +I+ + + E + +
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+ D F Y+ + M R+ +A M S +C+P+V T+N ++N AK
Sbjct: 360 SI--DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E ++ ++ G+ + L+ G + + + A V + PN+ TY+TL+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
GLC+ G +E+A + E ++ ++ T+NI+I G+ K GKVE+G L + KG
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P+ + Y +I G C + L E+ D +
Sbjct: 538 PD-----------------------------------VIIYNTMISGFCRKGLKEEADAL 562
Query: 361 LKKMVQQGFVPRMG 374
+KM + G +P G
Sbjct: 563 FRKMREDGPLPDSG 576
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 37/247 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +IIN L + KR D ++ + + +K+ D YN++ G+IS ++
Sbjct: 250 PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKI--NPDVVTYNILIDGLCKLGKISTSL 307
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E + +M S +G +D N LL L
Sbjct: 308 ELVDEMRS-----------------------------------IGKTVDIITYNSLLHAL 332
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+N +L+ A ++ E Q +PNV TY+TL+ GLC+ G +E+A+ + + + +EG
Sbjct: 333 CKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITV 392
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N++I+GL K+G +E + LL RM+ C P++ SY+ ++Y L +K + +L+
Sbjct: 393 WTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCA 452
Query: 329 MICERMS 335
MI +S
Sbjct: 453 MIVRGLS 459
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 127/257 (49%), Gaps = 16/257 (6%)
Query: 113 IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
+M ++ LC+ F + ++Y M I+K I +P+V TF+++++
Sbjct: 148 VMYSTIIDSLCK--GKFVTDAYRLYSEM---IAKGI-----------FPNVYTFSILVDA 191
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
L + + + K GV+ + ++ G C + A + + ++ EPN
Sbjct: 192 LCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPN 251
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
V Y+ +++GLC+K V+EA L + M + I+ D VT+NILI GL K GK+ ++L++
Sbjct: 252 VWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVD 311
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M+ G + +Y +L+ L +A LV + + + P+ +Y LI GLC
Sbjct: 312 EMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDG 371
Query: 353 LVEDVDWVLKKMVQQGF 369
+ED + ++++ +G+
Sbjct: 372 RLEDAYVIFQEILTEGY 388
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 142/307 (46%), Gaps = 14/307 (4%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNV----I 134
Q ++ N + +Y+ II+ L + K DA R+ E + + G F NV I
Sbjct: 136 QMLRKTWVNADVVMYSTIIDSLCKGKFVTDA-----YRLYSEMIAK---GIFPNVYTFSI 187
Query: 135 KIYGNMAGRISK-AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ R K A+ L M P+V T+ +++ + I+ + G
Sbjct: 188 LVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEG 247
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
VE + C NI++ GLC+ ++ A + E + P+V TY+ L+ GLC+ G + +
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSL 307
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L++ M S G D +T+N L+ L K +++ + L++ +K +G PN +Y ++ GL
Sbjct: 308 ELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGL 367
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
R +A + ++ E + +Y +I+GLC + L ++ +L +M +P
Sbjct: 368 CKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDA 427
Query: 374 GMWREIV 380
+ I+
Sbjct: 428 VSYETII 434
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 116/234 (49%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ +++KA+ M P+V +N+++N L K E ++ + D
Sbjct: 229 LVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVV 288
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NIL+ GLC+ G + + ++DE ++ TY++L+H LC+ ++++A L++ +
Sbjct: 289 TYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEI 348
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ +GI + T+ LI GL K G++E+ + + + +G + +Y ++ GL K F
Sbjct: 349 KDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLF 408
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EA L+ RM P VSY+ +I+ L + + +L M+ +G R+
Sbjct: 409 DEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRL 462
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 3/220 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ T +++N + I T K+G E ++ L+KG+C NG A
Sbjct: 43 PSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLF 102
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D + + +Y+ LM+GLC+ G A +L + ++AD V ++ +I L K
Sbjct: 103 HDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRK---TWVNADVVMYSTIIDSLCK 159
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
V + +L M KG +PN ++ ++ L ++ +A L+ M+ + + P+ V+
Sbjct: 160 GKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVT 219
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y ++ G C V + MVQ+G P + + I+
Sbjct: 220 YGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIII 259
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 139/317 (43%), Gaps = 38/317 (11%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N+ Y ++I+ LA R +E+ + + +L + + F YN + G + K
Sbjct: 279 NDVTYNVVISFLA---REGHLENAAKLVDSMRLSKKASSFTYNPLITALLERGFVQKVEA 335
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+M + P++ T+N +++ L+ ++ Q + +G+ D N +L G C
Sbjct: 336 LQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYC 395
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ GNL+ A ++L + + P V TY+TL+ G C G +EEA L E M +G D
Sbjct: 396 KAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVC 455
Query: 270 TFNILISGLRK-----------------------------------QGKVEEGMKLLERM 294
T+ IL++G K G + +L E M
Sbjct: 456 TYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVM 515
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
KG YP++ +Y ++ GL +AK+L +M+ + + P ++Y LIH C + L+
Sbjct: 516 MLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLL 575
Query: 355 EDVDWVLKKMVQQGFVP 371
+ +L MV G P
Sbjct: 576 SEARKLLNGMVSDGLQP 592
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 133/284 (46%), Gaps = 4/284 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P Y II+ L ++++ +A + ++ ++ + D YN + AG + +A+
Sbjct: 347 PTLVTYNAIIHGLLKSEQVEAAQ--LKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEAL 404
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L D+ P+V T+N +++ E + + + G D C IL+ G
Sbjct: 405 WLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGS 464
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ NL A DE + +P+ Y+T + G+ +AF L E M +GI DT
Sbjct: 465 HKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDT 524
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N++I GL K G +++ L +M G P+ +Y +++ ++ EA++L+
Sbjct: 525 VTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNG 584
Query: 329 MICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQQGFVP 371
M+ + + PS V+Y LIH C + L W +KM+ G P
Sbjct: 585 MVSDGLQPSVVTYTILIHTCCRRGNLYSAYGW-FRKMLDVGIEP 627
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 143/332 (43%), Gaps = 19/332 (5%)
Query: 64 IFSNLRDPISVISVLNQYSKRKDY------------NPNEALYTLIINKLAQAKRFDAIE 111
+ ++RD V+ VL ++ D P Y +++ + R D
Sbjct: 204 VAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEAS 263
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+++ ++ + + YNV+ + G + A + L D + S T+N ++
Sbjct: 264 MLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAK-LVDSMRLSKKASSFTYNPLIT 322
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L+ +++ + G+ N ++ GL ++ +EAA E P
Sbjct: 323 ALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLP 382
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
++ TY+++++G C+ GN++EA LL + G+ +T+N LI G + G +EE +L
Sbjct: 383 DLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLK 442
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E M +GC+P+ +Y ++ G + P A+E M+ + + P +Y I C +
Sbjct: 443 EEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRI---CAE 499
Query: 352 KLVEDVDWVLK---KMVQQGFVPRMGMWREIV 380
++ D + M+ +G P + I+
Sbjct: 500 LILGDTHKAFQLREVMMLKGIYPDTVTYNVII 531
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 114/272 (41%), Gaps = 2/272 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT+++N + + + + + L D F YN + G KA
Sbjct: 452 PDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGL--QPDCFAYNTRICAELILGDTHKAF 509
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M +P T+N++++ L + + + G++ D L+
Sbjct: 510 QLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAH 569
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
CE G L A +L+ +P+V TY+ L+H C +GN+ A+G +M GI+ +
Sbjct: 570 CERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNE 629
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+N+LI L + G+ M +G PN +Y ++ G + + +A L
Sbjct: 630 ITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFE 689
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
M + P + ++ L G + ++++
Sbjct: 690 MHQNGIPPDYCTHNALFKGFDKGHMYHAIEYL 721
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 136/324 (41%), Gaps = 27/324 (8%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALY-------------TLIINKLAQAK-RFDAIEDI 113
L D I+ S+LN Y K N EAL+ L N L R +E+
Sbjct: 381 LPDLITYNSMLNGYCKAG--NLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEE- 437
Query: 114 MQRIK---VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
+R+K VE+ C F D Y ++ + + A E +M S P +N
Sbjct: 438 ARRLKEEMVEQGC-FPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYN--- 493
Query: 171 NLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+ + + G+ + + G+ D N+++ GLC+ GNL+ A + +
Sbjct: 494 TRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSD 553
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
+P+ TY+ L+H CE+G + EA LL M S+G+ VT+ ILI ++G +
Sbjct: 554 GLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSA 613
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+M G PN +Y +++ L R A M+ ++P+ +Y LI G
Sbjct: 614 YGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDG 673
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVP 371
C + D + +M Q G P
Sbjct: 674 NCREGNWADAIRLYFEMHQNGIPP 697
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 3/183 (1%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GV D N +L+ L + + V E + EP + TY+TL+ ++G +EA
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262
Query: 253 FGLLERMESEGIDA--DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
LL+ ME++G + VT+N++IS L ++G +E KL++ M+ +S +Y ++
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNPLI 321
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
LL++ + + L M E + P+ V+Y +IHGL + VE +M G +
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL 381
Query: 371 PRM 373
P +
Sbjct: 382 PDL 384
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 146/349 (41%), Gaps = 43/349 (12%)
Query: 68 LRDPISVISVLNQYSKRKD-YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
LR+ + VL + RKD +PN Y L++ L Q R A ++ + K C
Sbjct: 139 LRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA-RKGCPPD 197
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D + ++ + + R+ +A E L MP P ++N ++ L E+ +
Sbjct: 198 DVTYATIVSVLCKL-DRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVV 251
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G++ + ++ C+ G L A +L C PNV T++ L+ GL +
Sbjct: 252 SDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDD 311
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G V +A + M +EG TV++NILI GL G ++ +L M+ GC+PN +Y
Sbjct: 312 GRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTY 371
Query: 307 QEVLYG-----------------------------------LLDKKRFPEAKELVGRMIC 331
++ G K F +AK L+ +M+
Sbjct: 372 STLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLL 431
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E P+ V++ LI LC+ + V V +M + G VP + E++
Sbjct: 432 ENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELI 480
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 148/362 (40%), Gaps = 67/362 (18%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK---------VEKLCR---------- 124
RK P++ Y I++ L + R D +++ + V LCR
Sbjct: 191 RKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSV 250
Query: 125 FSD----GFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLL 173
SD G NVI Y + AG + A L M C P+V TF LV L
Sbjct: 251 VSDMVGRGLQPNVIT-YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLF 309
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+++ + ++ G NIL++GLC G+L+ A +L+ + C PNV
Sbjct: 310 DDGRVHDALD-MWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNV 368
Query: 234 RTYSTLMHGLCEKGNV-----------------------------------EEAFGLLER 258
RTYSTL+ G + G++ +A L+++
Sbjct: 369 RTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDK 428
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M E +TVTFN LI L +V + + M+ GC PN +Y E+++GL +
Sbjct: 429 MLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGN 488
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
+A +V M + S V+Y ++ GLC ++ + + KM+ QG P +
Sbjct: 489 CGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSA 548
Query: 379 IV 380
I+
Sbjct: 549 II 550
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 144/316 (45%), Gaps = 35/316 (11%)
Query: 98 INKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF-DMPS 156
+ +LA A D ++ +Q +++ + ++G + + AG +A++T + +
Sbjct: 62 VRRLAAAGDVDGVQLALQEMRLRGV-PCTEGALVAAVGAFAR-AGAPDRALKTFYRAVHD 119
Query: 157 YNCWPSV--KTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
C + +N +++ L+ + G + +Y + K GV + N+L++ LC+N +
Sbjct: 120 LGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRV 179
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA---------------------- 252
AA +LDE ++ C P+ TY+T++ LC+ ++EA
Sbjct: 180 GAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALC 239
Query: 253 --------FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
F ++ M G+ + +T+ ++ K G++ +L RM GC PN
Sbjct: 240 REFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVV 299
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ ++ GL D R +A ++ M+ E +PS VSY LI GLC+ ++ +L M
Sbjct: 300 TFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSM 359
Query: 365 VQQGFVPRMGMWREIV 380
Q G P + + ++
Sbjct: 360 EQHGCFPNVRTYSTLI 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 136/303 (44%), Gaps = 16/303 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM---- 140
+ + P+ Y ++I L I+ ++ G F NV + Y +
Sbjct: 327 EGWAPSTVSYNILIRGLCSVGDLKGASSILNSME-------QHGCFPNV-RTYSTLIDGF 378
Query: 141 --AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
AG + AI DM C P+V + ++++ ++ + + + +
Sbjct: 379 SKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNT 438
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N L++ LC+ + A V E + C PN RTY+ L+HGL +GN +A ++
Sbjct: 439 VTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTE 498
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M+S GI+ VT+N ++SGL + E M + +M +G PN+ ++ +++ +
Sbjct: 499 MQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGE 558
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQQGFVPRMGMWR 377
A ++G M + + Y L+ LCNQ KLV+ + ++L KM+ +G P W
Sbjct: 559 VRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLL-KMLYEGIYPNTVTWN 617
Query: 378 EIV 380
+V
Sbjct: 618 VLV 620
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 16/292 (5%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
S+LN + + PN Y+ +I+ ++A I + G NV+
Sbjct: 354 SILNSMEQHGCF-PNVRTYSTLIDGFSKAGDLGGAISIWNDMS-------RSGCKPNVV- 404
Query: 136 IYGNMAGRISKAI-----ETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+Y NM K + ++L D M NC P+ TFN ++ L + G G++
Sbjct: 405 VYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEM 464
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ G + N L+ GL GN A +++ E E ++ TY+T++ GLC+
Sbjct: 465 RRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMS 524
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EA + +M +GI + TF+ +I K+G+V +L M C+ N Y +
Sbjct: 525 REAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTIL 584
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVDWV 360
+ L ++ + +A + +M+ E + P+ V++ L+ G+ N +E D++
Sbjct: 585 MAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFI 636
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 11/247 (4%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK-------LYGEIQGIYTSAAKLG 193
+G + +A +T +M S N PS + FN +++ + +K L+ ++ +
Sbjct: 279 SGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPN 338
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+E NI++ LC+ L+ A +++E P+V TYS L+ GLC+ G ++ A
Sbjct: 339 LET----YNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRAC 394
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
LLE M EG+ D+ T +++ L K GKV+ + LE MK +G P+ +Y +L GL
Sbjct: 395 DLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGL 454
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
R EA + +M+ + +P SY +I LC + ++MV++G +P
Sbjct: 455 CKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDT 514
Query: 374 GMWREIV 380
++ ++
Sbjct: 515 VLYHSLL 521
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + C P+++T+N++++ L AK E Q + A G+ D + L+ GLC+ G
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A +L+E K+ P+ T +++++ L + G V+ A LE M++ G D VT+N
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ GL K G+++E + L +M C P+ SY ++ L + A + M+
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDV------------DWVLKKMVQQGF 369
+ P V Y L+ GL L ED+ D+V+ KMV G
Sbjct: 510 VLPDTVLYHSLLDGLARNGL-EDLALELLKTSLCKPDFVMHKMVVDGL 556
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 144/325 (44%), Gaps = 22/325 (6%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
T V ++ +L +++ + + ++K Y + Y ++ LA+A + Q++
Sbjct: 6 TVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM- 64
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
++ D F Y+++ AG + KA E L + +V T+++V++ A
Sbjct: 65 -QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASR 123
Query: 179 YGEIQGIY-TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
+ I+ T +A G D N LLKGLC + AF + + K CEPNV +YS
Sbjct: 124 VDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYS 183
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
TL+ GLC+ G ++EA L E M + D V + ++GL K +V E +M K
Sbjct: 184 TLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK 243
Query: 298 GCYPNSASYQEVLYGLLDKK------------------RFPEAKELVGRMICERMSPSFV 339
G ++ ++ V+ G+L KK EA + MI PS
Sbjct: 244 GSKADAVAFSTVI-GILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAE 302
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKM 364
+ LIH +C K + D + ++M
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRM 327
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 1/221 (0%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
SV T+N L+ L A + + G D +I+L+GLC+ G L+ A +L
Sbjct: 37 SVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELL 96
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-IDADTVTFNILISGLRK 280
+ + + NV TYS ++ G C+ V++A + + M + G D VTFN L+ GL
Sbjct: 97 GQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCS 156
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
++ E L E M GC PN SY +L GL R EA L M+ + P V+
Sbjct: 157 GERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVA 216
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
Y + GLC V + +KMV +G + ++G
Sbjct: 217 YTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 133/342 (38%), Gaps = 58/342 (16%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
VL +Y + PN Y+ +++ L +A R D + + + VEK C D Y
Sbjct: 165 VLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEM-VEKSC-VPDLVAYTSFVT 222
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
A R+++A + M + F+ V+ +L E Q
Sbjct: 223 GLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ------------- 269
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
N +++ LC +G L+ A +E +N P+ ++TL+H +C+ + + L
Sbjct: 270 -----NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLF 324
Query: 257 ERMESE--------------------------------------GIDADTVTFNILISGL 278
+RM+S G+ D VT++ L+ GL
Sbjct: 325 QRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGL 384
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K GK++ LLE M +G +P+S + +L L + A + M +P
Sbjct: 385 CKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDL 444
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+Y L+ GLC +++ L KMV P + + I+
Sbjct: 445 VTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIII 486
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G T+N + L K + + ++M+ +G P+ +Y VL GL +
Sbjct: 32 KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDK 91
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
AKEL+G++ + + ++Y +I G C V+D + K M G
Sbjct: 92 AKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGG 138
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 141/286 (49%), Gaps = 2/286 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D PN +YT +I + R + I + + V + C D N AG +
Sbjct: 512 DQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEM-VHRGCS-PDLMLLNSYMDCVFKAGEVE 569
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
K ++ + P V++++++++ LV A E ++ + G+ +D N ++
Sbjct: 570 KGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVI 629
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C++G ++ A+ +L+E + +P V TY +++ GL + ++EA+ L E +S G+D
Sbjct: 630 DGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVD 689
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ V ++ LI G K G+++E +LE + KG PNS ++ +L L+ + EA+
Sbjct: 690 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVC 749
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + SP+ ++Y +I+GLC + ++M +QG P
Sbjct: 750 FQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKP 795
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 2/288 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN ++I++L +A++ D I + K+C F ++I G GR+ A
Sbjct: 445 PNIMTVNIMIDRLCKAQKLDEACSIFLGLD-HKVCSPDSRTFCSLIDGLGR-RGRVDDAY 502
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M + P+V + ++ + IY G D LN + +
Sbjct: 503 SLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCV 562
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G +E + +E Q P+VR+YS L+HGL + G E + L M+ +G+ D
Sbjct: 563 FKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDV 622
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ +N +I G K GKV++ +LLE MK KG P +Y V+ GL R EA L
Sbjct: 623 LAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE 682
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ + V Y LI G +++ +L++++Q+G P W
Sbjct: 683 AKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTW 730
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 8/327 (2%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
T ++++F+ + +S+L++ K + + LY + I+ + + D +K
Sbjct: 242 TTLVRVFAREGRIDAALSLLDEM-KSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMK 300
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+ L D Y + A R+ +A+E ++ P V +N ++ SA
Sbjct: 301 AQGL--VPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGK 358
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ E + + G N +L L G +E A + DE +Q+ PN+ TY+
Sbjct: 359 FDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNI 417
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L+ LC+ G +E A + + M+ G+ + +T NI+I L K K++E + + K
Sbjct: 418 LIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKV 477
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL--CNQKLVED 356
C P+S ++ ++ GL + R +A L +M+ P+ V Y LI C +K ED
Sbjct: 478 CSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRK--ED 535
Query: 357 VDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ K+MV +G P + + + CV
Sbjct: 536 GHKIYKEMVHRGCSPDLMLLNSYMDCV 562
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 117/256 (45%), Gaps = 15/256 (5%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-- 140
K K P Y +++ LA+ R D + + K S G NV+ IY ++
Sbjct: 649 KTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAK-------SIGVDLNVV-IYSSLID 700
Query: 141 ----AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
GRI +A L ++ P+ T+N +L+ LV A+ E Q + + L
Sbjct: 701 GFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSP 760
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+A +I++ GLC AF E KQ +PN TY+T++ GL + GNV EA GL
Sbjct: 761 NAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLF 820
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+R ++ G D+ +N +I GL K + + E + KGC NS + VL L K
Sbjct: 821 DRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCV-VLLDALHK 879
Query: 317 KRFPEAKELVGRMICE 332
E +VG ++ E
Sbjct: 880 ADCLEQAAIVGAVLRE 895
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 128/280 (45%), Gaps = 2/280 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++I+ L +A + +K + L D YN + +G++ KA
Sbjct: 585 PDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGL--HLDVLAYNTVIDGFCKSGKVDKAY 642
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L +M + P+V T+ V++ L E ++ A +GV+++ + L+ G
Sbjct: 643 QLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGF 702
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G ++ A+ +L+E ++ PN T++ L+ L + ++EA + M++ +
Sbjct: 703 GKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNA 762
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++I+I+GL K + + M+ +G PN+ +Y ++ GL EA+ L R
Sbjct: 763 MTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDR 822
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
P Y +I GL + D V ++ +G
Sbjct: 823 FKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKG 862
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 141/364 (38%), Gaps = 77/364 (21%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL--CRFSDGFFYNVIKIYGNMAGRISK 146
P++ YT +I L +A+R D ++ + + + + C ++ YN + + AG+ +
Sbjct: 306 PDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYA----YNTMIMGYGSAGKFDE 361
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L C PSV +N +L L E I+ + + NIL+
Sbjct: 362 AYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAP-NLTTYNILID 420
Query: 207 GLCENGNLEAAFYVLDE------FPK-----------------------------QNCEP 231
LC+ G LEAA V D FP + C P
Sbjct: 421 MLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSP 480
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESE----------------------------- 262
+ RT+ +L+ GL +G V++A+ L E+M
Sbjct: 481 DSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIY 540
Query: 263 ------GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
G D + N + + K G+VE+G L E +K +G P+ SY +++GL+
Sbjct: 541 KEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKA 600
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
E +L M + + ++Y +I G C V+ +L++M +G P + +
Sbjct: 601 GFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTY 660
Query: 377 REIV 380
+V
Sbjct: 661 GSVV 664
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%)
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
E NV ++TL+ +G ++ A LL+ M+S AD V +N+ I K GKV+ K
Sbjct: 235 EANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWK 294
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
MK +G P+ +Y ++ L +R EA EL + R P +Y +I G
Sbjct: 295 FFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYG 354
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ ++ +L++ ++G +P + + I+ C+
Sbjct: 355 SAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCL 388
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 140/362 (38%), Gaps = 51/362 (14%)
Query: 60 EVLKIFSNLRDPISVISVLN---------QYSKRKDYNPNEA----LYTLIINKLAQAKR 106
E L +F + P ++ V+ QY + + +A +Y + +A+ +
Sbjct: 89 EALNVFDEMSQPEVIVGVMKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRN 148
Query: 107 FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF 166
D +E I++ + V S+ ++ + + ++ +A + M + P+ +
Sbjct: 149 LDYLEQILEEMSVAGF-GLSNHVSVELVASFVK-SHKLKEAFGVIEMMRKFKFRPAFSAY 206
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
++ L +A + ++ ++G E + L++ G ++AA +LDE
Sbjct: 207 TTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKS 266
Query: 227 -----------------------------------QNCEPNVRTYSTLMHGLCEKGNVEE 251
Q P+ TY+TL+ LC+ ++E
Sbjct: 267 NSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDE 326
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A L E ++ +N +I G GK +E LLER K KGC P+ +Y +L
Sbjct: 327 AVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILT 386
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L K + EA + M + +P+ +Y LI LC +E V M + G P
Sbjct: 387 CLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFP 445
Query: 372 RM 373
+
Sbjct: 446 NI 447
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 135/277 (48%), Gaps = 2/277 (0%)
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM 154
TL+ A+ K DA+ + +++ EK+C ++ + V+ G K + L M
Sbjct: 137 TLLGGLFAENKVTDAVV-LFKKLVREKICEPNEVMYGTVMNGLSK-RGHTEKTLSLLRIM 194
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
N P V+T+++V++ L + + + + N L+ GLC+ G
Sbjct: 195 EQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQW 254
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
E +L E N PNV T+S L+ GLC++G VE+A ++ M +G++ D +T++ +
Sbjct: 255 EKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAI 314
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
+ G +G+V+ ++ ++ KG PN SY ++ G KK +A +L G + + +
Sbjct: 315 MDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGL 374
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P V+Y ++HGL + D + +M++ G P
Sbjct: 375 KPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTP 411
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 144/290 (49%), Gaps = 2/290 (0%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ + + + K PNE +Y ++N L++ + ++ RI +E+ D Y+++
Sbjct: 152 VVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLL-RI-MEQGNTKPDVRTYSIV 209
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+ AI L +M N P++ T+N +++ L + +++ + + L +
Sbjct: 210 IDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNI 269
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ +IL+ GLC+ G +E A V+ ++ EP++ TYS +M G C +G V+ A
Sbjct: 270 NPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARR 329
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ + +GI + +++ILI+G K+ + + M+L + KG P++ +Y +L+GL+
Sbjct: 330 VFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLI 389
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+ R +AK++ M+ +P + L+ G LVE+ + K+
Sbjct: 390 EVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL 439
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 155/331 (46%), Gaps = 19/331 (5%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+S++ ++ Q + + P+ Y+++I+ L + DA +++ +K + + + F Y
Sbjct: 188 LSLLRIMEQGNTK----PDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIP--PNIFTY 241
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N + G+ K L +M + N P+V TF+++++ L + + +
Sbjct: 242 NSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIE 301
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
GVE D + ++ G C G ++ A V + + +PN+ +YS L++G C+K N+ +
Sbjct: 302 KGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAK 361
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A L + +G+ DTVT++ ++ GL + G++ + K+ + M G P+ + +L+
Sbjct: 362 AMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLF 421
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G EA L ++ R + Y +I+GLC V + + +K+ G +P
Sbjct: 422 GYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIP 481
Query: 372 -------------RMGMWREIVGCVTFGKDN 389
R G++ E+ G + +DN
Sbjct: 482 DVRTYNVMITGFCREGLFDEVKGILRKMEDN 512
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 124/289 (42%), Gaps = 38/289 (13%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ M PSV F+ + +++ K Y + ++ LG+ I LNI
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL------------------------ 239
+ C ++ AF VL + K NV T++TL
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162
Query: 240 ------------MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
M+GL ++G+ E+ LL ME D T++I+I L K ++
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+ LL MK K PN +Y ++ GL ++ + K L+ M+ ++P+ ++ LI G
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRNRVY 394
LC + VED D V++ M+++G P + + I+ C+ D RV+
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVF 331
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 17/303 (5%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI-------KVEKLCRF 125
+ I++LN+ K+K+ PN Y +I+ L + +++ ++ ++ + V
Sbjct: 221 AAINLLNEM-KQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSIL 279
Query: 126 SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
DG G++ A E + M P + T++ +++ + +
Sbjct: 280 IDGLCKE---------GKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRV 330
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ G++ + +IL+ G C+ NL A + E ++ +P+ TYST++HGL E
Sbjct: 331 FNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIE 390
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G + +A + + M G D + L+ G K G VEE M L +++ N +
Sbjct: 391 VGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISF 450
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y V+ GL R EA + ++ + P +Y +I G C + L ++V +L+KM
Sbjct: 451 YTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKME 510
Query: 366 QQG 368
G
Sbjct: 511 DNG 513
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 96/189 (50%), Gaps = 4/189 (2%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
++KA++ ++ P T++ +L+ L+ G+ + I+ ++G D C +
Sbjct: 359 LAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHST 418
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL G + G +E A + + + + N+ Y+ +++GLC+ V EA + E++ S G
Sbjct: 419 LLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIG 478
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE-- 321
+ D T+N++I+G ++G +E +L +M+ GC N+ +Y ++ G + E
Sbjct: 479 LIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIV 538
Query: 322 --AKELVGR 328
KE+ GR
Sbjct: 539 SFMKEMAGR 547
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 136/284 (47%), Gaps = 2/284 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
+ NPN ++++I+ L + + + +++M+ + +EK D Y+ I + G++
Sbjct: 268 NINPNVHTFSILIDGLCKEGKVEDADEVMRHM-IEKGVE-PDIITYSAIMDGYCLRGQVD 325
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A + P++ ++++++N K + ++ ++ G++ D + +L
Sbjct: 326 RARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTIL 385
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GL E G + A + DE + P++ +STL+ G + G VEEA L ++E D
Sbjct: 386 HGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNRED 445
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ + ++I+GL K +V E + E++ G P+ +Y ++ G + F E K +
Sbjct: 446 TNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGI 505
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ +M + ++Y ++ G + ++ +K+M +GF
Sbjct: 506 LRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGF 549
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 87/170 (51%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ GL + G+ E +L + N +P+VRTYS ++ LC+ N++ A LL M+ +
Sbjct: 174 VMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKN 233
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I + T+N LI GL K G+ E+ LL M PN ++ ++ GL + + +A
Sbjct: 234 IPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDAD 293
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
E++ MI + + P ++Y ++ G C + V+ V + +G P +
Sbjct: 294 EVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNI 343
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 16/208 (7%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRF-DA--IEDIMQRI-KVEKLCRFSD---GFFYNVIKI 136
+K P+ Y+ I++ L + R DA I D M R+ +C S G+F
Sbjct: 371 QKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFK----- 425
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G + +A+ + ++ + +V+N L E I+ +G+
Sbjct: 426 ----YGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIP 481
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N+++ G C G + +L + C N TY+ +M G + E +
Sbjct: 482 DVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFM 541
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKV 284
+ M G D T +LI+ L++ +
Sbjct: 542 KEMAGRGFSFDATTTGVLINVLKENPSI 569
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 7/281 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR-ISKA 147
P Y II +A+R D M+++ E D Y + I G R + +
Sbjct: 142 PTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGC--HPDIITYTAL-IGGFCKSRDVGRG 198
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E L ++ P + T++ V++ L A G ++ ++ A N L+ G
Sbjct: 199 LELLGEVTRRGFTPDIVTYSTVIDGLCKA---GRLRDAVDIFEEMSCAPTAITYNSLIGG 255
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C G+++ A +L + C P+V TY+TLM C+ G +++A+ L ++M + + D
Sbjct: 256 YCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPD 315
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VTF L+ GL +G++E+ ++LLE + +GC P +Y V+ G + +A+ELV
Sbjct: 316 VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVA 375
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
P+ V+Y L+ G C + L ++ +G
Sbjct: 376 DFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 416
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 132/285 (46%), Gaps = 8/285 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISK 146
NP L+ ++I L +A R + +++ F ++G + A R+
Sbjct: 2 NPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH----PPDFLTYTKLVHGLSKARRLRD 57
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A++ L +M S P T +V+ L + + + G+ +A + L+
Sbjct: 58 AVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVD 117
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ L+ A +++ ++ C P V TY++++ G C V+EA G +E+M +EG
Sbjct: 118 GLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHP 177
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D +T+ LI G K V G++LL + +G P+ +Y V+ GL R +A ++
Sbjct: 178 DIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF 237
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M C +P+ ++Y LI G C +++ +L KMV P
Sbjct: 238 EEMSC---APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAP 279
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 145/309 (46%), Gaps = 6/309 (1%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N Y+ +++ L + +R D +++ + E+ C + + ++I + A R+ +A
Sbjct: 108 NAITYSALVDGLCKCERLDEAVALVETM-AERGCAPTVVTYNSIITGFCR-ARRVDEAHG 165
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+ M + C P + T+ ++ ++ G + + G D + ++ GLC
Sbjct: 166 FMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLC 225
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G L A +D F + +C P TY++L+ G C G+++EA LL +M + D V
Sbjct: 226 KAGRLRDA---VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVV 282
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+ L+S K G++++ +L ++M P+ ++ ++ GL + R +A EL+ +
Sbjct: 283 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 342
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKD 388
P+ +Y ++ G C V + ++ +GFVP + +V GC G+
Sbjct: 343 TRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 402
Query: 389 NRNRVYVTE 397
++ Y+ +
Sbjct: 403 DQALQYLDQ 411
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GL + L A VL E P+ T + ++ LC V++A L+E M G
Sbjct: 45 LVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 104
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ A+ +T++ L+ GL K +++E + L+E M +GC P +Y ++ G +R EA
Sbjct: 105 MAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAH 164
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ +M+ E P ++Y LI G C + V +L ++ ++GF P + + ++
Sbjct: 165 GFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVI 221
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 4/243 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +++ + R D ++ Q++ KL F V + G GR+ A+
Sbjct: 279 PDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE--GRMEDAL 336
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L ++ C P++ T+N V++ A + + + G + NIL+ G
Sbjct: 337 ELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGC 396
Query: 209 CENGNLEAAFYVLDEFPKQN--CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
C G + A LD+ + C +V Y+ ++ LC G ++A E M G
Sbjct: 397 CRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVP 456
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
TF ++ L K + ++ +LLE M G P + V+ +A EL
Sbjct: 457 AAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELA 516
Query: 327 GRM 329
+
Sbjct: 517 SEL 519
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 114/238 (47%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA + M P ++ ++N L G + + G + N
Sbjct: 1 MKKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNS 60
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++GLC +GNL + +LD+ + PN TYS L+ ++ V EA LL+ + ++G
Sbjct: 61 LVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKG 120
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ V++N+L++GL K+G+ EE ++ + KG PN SY +L L + R+ EA
Sbjct: 121 WQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEAN 180
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+L+ M E SPS V+Y LI L +E VL +MV+ F P + I+
Sbjct: 181 QLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIA 238
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 5/277 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRI-KVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ A YT ++N L KR + I MQ + K+E+ ++ YN + M G ++++
Sbjct: 18 PDAASYTFLVNNLC--KRGN-IGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQS 74
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ L + P+ T++ +L + E + G + + N+LL G
Sbjct: 75 LQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTG 134
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G E A + P + PNV +Y+ ++ LC +G EEA LL M+SE
Sbjct: 135 LCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPS 194
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+NILI L G++E ++L+ M P++ +Y ++ L + + + +
Sbjct: 195 LVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLD 254
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+MI R +P+ ++ I LC Q V + +++ +
Sbjct: 255 QMIHHRCNPNEGTFNA-IAVLCKQGRVPEAFSIIQNL 290
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 44/284 (15%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA--G 142
K +NPN Y +I+ L R++ ++ + E+ R YN++ G++A G
Sbjct: 154 KGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEE--RSPSLVTYNIL--IGSLAFHG 209
Query: 143 RISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKL----------------------- 178
RI A E L +M + PS T+N ++ +L KL
Sbjct: 210 RIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFN 269
Query: 179 -------YGEIQGIYTSAAKLGVEIDACCLNI---LLKGLCENGNLEAAFYVLDEFPKQN 228
G + ++ LG + + + ++ LC GN AF +L E K
Sbjct: 270 AIAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFG 329
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
P+ TYS+L+ GLC +G ++EA + +E FN LI G K G+ + +
Sbjct: 330 FVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTDLSL 389
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
+LE M KG PN +Y ++ G+ + E KEL ++ E
Sbjct: 390 DILEMMVEKGYTPNETTYTIIVEGIAHE----EEKELAAEVLKE 429
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 138/311 (44%), Gaps = 31/311 (9%)
Query: 89 PNEALYTLIINKLA-QAKRFDA--IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PN Y +I++ L + K FD +ED V+ D Y + G +
Sbjct: 354 PNSYTYNIIVDGLCKEGKAFDVRKVEDF-----VKSGVMTPDVVTYTSLLHAYCSEGNAA 408
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A L +M C P+ T+N++L L A E + + ++ G +D NI++
Sbjct: 409 AANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIII 468
Query: 206 KGLCENGNLEAAFYVLDEF-----------------------PKQNCEPNVRTYSTLMHG 242
GLC N L+ A ++D + C P+ TYSTL+
Sbjct: 469 DGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSA 528
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC++G +EA L M + I D+V ++ I G K GK +K+L M+ KGC P+
Sbjct: 529 LCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPS 588
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+ +Y +++G +K E +L+ M + + P+ ++Y LI C + +V +L
Sbjct: 589 TRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLD 648
Query: 363 KMVQQGFVPRM 373
+M+Q VP +
Sbjct: 649 EMLQNEIVPNI 659
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 32/235 (13%)
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
L+L L A+ + ++ +Y G D NILL+ LC G +E A V D P++
Sbjct: 121 LLLAALQEAR-FDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMPER 179
Query: 228 N-----------CEP----------------NVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N C N+ +T++ G C +G V+EA L+ERM
Sbjct: 180 NEFSFGILARGYCRAGRSMDALGVLDSMPTMNLVVCNTVVAGFCREGQVDEAERLVERMR 239
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG----CYPNSASYQEVLYGLLDK 316
EG+ + VTFN IS L K G+V + ++ M+ K P+ ++ +L G +
Sbjct: 240 DEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEA 299
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA+ LV M C SY + + GL +V + +L++M +G P
Sbjct: 300 GMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQP 354
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D + L+ LC+ G + A L E ++ P+ Y T +HG C+ G A +L
Sbjct: 518 DRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVL 577
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
ME +G T T+N+LI G R++ +E +KL+ MKGKG PN +Y ++ ++
Sbjct: 578 RDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCER 637
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+A L+ M+ + P+ S++ LI C
Sbjct: 638 GMVNKAMPLLDEMLQNEIVPNITSFELLIKAFC 670
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 158/376 (42%), Gaps = 66/376 (17%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ T +L + + + + +L++ ++ K PN Y +++ L +A R E +
Sbjct: 390 DVVTYTSLLHAYCSEGNAAAANRILDEMAQ-KGCAPNSFTYNVLLQSLWKAGRITEAERL 448
Query: 114 MQR--------------IKVEKLCR---------FSDGFFYNVIKIYGNMA-GRIS--KA 147
++R I ++ LCR DG + G++A GR+
Sbjct: 449 LERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNE-----GSLALGRLGYSFL 503
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
S C P T++ +++ L + E + + D+ + + G
Sbjct: 504 SLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHG 563
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C++G A VL + K+ C+P+ RTY+ L+ G EK N +E L+ M+ +GI +
Sbjct: 564 YCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPN 623
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ-------------------- 307
+T+N LI ++G V + M LL+ M PN S++
Sbjct: 624 VMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFD 683
Query: 308 ---------EVLYGLLDKK-----RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
EVLY L+ + R+ EA ++ ++ R+S YK++I GLC
Sbjct: 684 ASLSTCGQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDE 743
Query: 354 VEDVDWVLKKMVQQGF 369
V+ +LK ++ +G+
Sbjct: 744 VDHGHRLLKLLMVKGY 759
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 131/311 (42%), Gaps = 51/311 (16%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-----AGRISKAIETL 151
++ + + D E +++R++ E G NV+ + AGR+ A
Sbjct: 218 VVAGFCREGQVDEAERLVERMRDE-------GLAPNVVTFNARISALCKAGRVLDAYRIF 270
Query: 152 FDMPSYNCW------PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC------ 199
DM W P TF+++L+ A + E A++ V+I C
Sbjct: 271 NDMQEK--WERGLPRPDQVTFDVMLSGFCEAGMVDE--------ARVLVDIMRCGGFLRR 320
Query: 200 --CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L GL NG + A +L E + +PN TY+ ++ GLC++G + + +
Sbjct: 321 VESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVED 380
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
++S + D VT+ L+ +G ++L+ M KGC PNS +Y +L L
Sbjct: 381 FVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAG 440
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVDWVLKKMVQQGFVPRMGMW 376
R EA+ L+ RM + S S +I GLC N KL +D V GMW
Sbjct: 441 RITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIV------------DGMW 488
Query: 377 REIVGCVTFGK 387
E G + G+
Sbjct: 489 NE--GSLALGR 497
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 88/212 (41%), Gaps = 3/212 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
++K P+ Y L+I + D I ++ +K + +C + YN + G
Sbjct: 581 EKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGIC--PNVMTYNSLIKSFCERG 638
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++KA+ L +M P++ +F L++ + Q ++ ++ + + +
Sbjct: 639 MVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQKEVL-YS 697
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++ L G A +L+ + + Y ++ GLC+ V+ LL+ + +
Sbjct: 698 LMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVK 757
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
G D F +I L ++GK + L ++M
Sbjct: 758 GYSFDPAAFMPVIDALSERGKKQHVDMLSQKM 789
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 136/271 (50%), Gaps = 4/271 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI-YGNMAGRISKAIETLF 152
Y II+ L + RF+ D++ ++ +KL D + YN I + G++ KA +
Sbjct: 337 YNTIISGLCKEGRFEEAFDLLAEMEEKKLG--PDCYTYNAILCALADAEGQVEKAFQFRN 394
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M + P + T N++L L + + ++ + G IDA N ++ GLC+ G
Sbjct: 395 KMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEG 454
Query: 213 NLEAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
E AF +L E ++N P+ TY+T++ G C +G VE+AF +M + D T
Sbjct: 455 RFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTC 514
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
NIL+ GL ++G + + +KL KG ++ +Y ++ GL + RF EA +L+ M
Sbjct: 515 NILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKE 574
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+++ P +Y ++ L + +E +++ K
Sbjct: 575 KKLGPDCYTYNAILCALADAGRMEAEEFMSK 605
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 6/296 (2%)
Query: 83 KRKDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
K KD++ P+ A Y I++ L + + I + ++ + YN I I+G
Sbjct: 217 KMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTI-IHGYC 275
Query: 141 -AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G++ KA + M + P + T N++L L + + ++ + G IDA
Sbjct: 276 REGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAV 335
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE-KGNVEEAFGLLER 258
N ++ GLC+ G E AF +L E ++ P+ TY+ ++ L + +G VE+AF +
Sbjct: 336 TYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNK 395
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M + D T NIL+ GL +G ++ +KL KG ++ +Y ++ GL + R
Sbjct: 396 MVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGR 455
Query: 319 FPEAKELVGRMICER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
F EA +L+ M + + P +Y +I G C + VE KMV++ F P +
Sbjct: 456 FEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDL 511
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 6/258 (2%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN I GR +A + L +M P T+N +L L A+ G+++ +
Sbjct: 333 DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAE--GQVEKAF 390
Query: 187 TSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
K+ + D NILL+GLC G L+ A + + + + + TY+T++ GL
Sbjct: 391 QFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGL 450
Query: 244 CEKGNVEEAFGLLERMESE-GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
C++G EEAF LL ME + G+ D T+N +I G ++G+VE+ + +M K P+
Sbjct: 451 CKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPD 510
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+ +L GL + +A +L I + + V+Y +I GLC + E+ +L
Sbjct: 511 LFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLA 570
Query: 363 KMVQQGFVPRMGMWREIV 380
+M ++ P + I+
Sbjct: 571 EMKEKKLGPDCYTYNAIL 588
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 36/250 (14%)
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
S F NVIK + ++S+AI + M ++C+P ++N +L++L
Sbjct: 191 LSKAIFTNVIKF--GVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVL----------- 237
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
LC +G + + L+E + P+ TY+T++HG C
Sbjct: 238 ----------------------WLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYC 275
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+G VE+AF +M + D T NIL+ GL +G ++ +KL KG ++
Sbjct: 276 REGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAV 335
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVLKK 363
+Y ++ GL + RF EA +L+ M +++ P +Y ++ L + + VE K
Sbjct: 336 TYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNK 395
Query: 364 MVQQGFVPRM 373
MV++ F P +
Sbjct: 396 MVEKSFKPDL 405
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 127/239 (53%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
+N++ + ++S+AI + M ++C+P ++N +L++L E + +
Sbjct: 51 FNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMK 110
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G+ + NIL+ G C+ G L+ A V+D + N P+VRTY+TL+ GLC+ G ++
Sbjct: 111 NNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKID 170
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EAF L + ME+ + VT+N+LI+G + +G +L++ M+GKG PN+ +Y V+
Sbjct: 171 EAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVV 230
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ + + A + +M SP V++ L +G C + + ++ +M ++G
Sbjct: 231 KWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGL 289
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 131/271 (48%), Gaps = 1/271 (0%)
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
K++ F D YN I G++++A + L DM + +P+ TFN++++
Sbjct: 73 KMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLG 132
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
E + A+ V D L+ GLC++G ++ AF + DE P+V TY+
Sbjct: 133 WLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYN 192
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
L++G E + + F L++ ME +G+ + VT+N+++ K+GK++ L +M+
Sbjct: 193 MLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEES 252
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G P+ ++ + G R EA ++ M + + + V+ ++H LC ++ ++D
Sbjct: 253 GFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDA 312
Query: 358 DWVLKKMVQQG-FVPRMGMWREIVGCVTFGK 387
+L ++G FV + I+G GK
Sbjct: 313 YKLLSSASKRGYFVDEVSYGTLIMGYFKVGK 343
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 3/190 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
P++ T N ++ LV + + I++ KLGVE++ NIL+ G C L A
Sbjct: 8 PNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEA 67
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
++ + +C P+ +Y+T++ LC+KG + EA LL M++ G+ + TFNIL+SG
Sbjct: 68 IGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSG 127
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
K G ++E ++++ M P+ +Y ++ GL + EA L M ++ P
Sbjct: 128 YCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPH 187
Query: 338 FVSYKKLIHG 347
V+Y LI+G
Sbjct: 188 VVTYNMLING 197
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 40/247 (16%)
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC-------------CLNILLK 206
W +K ++ +++ YG + G + K ID C N ++
Sbjct: 347 WDEMKEKEIIPSIIT----YGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIIL 402
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C G ++ AF+ ++ K++ +P++ T + L+ GLC +G +++A L + S+G
Sbjct: 403 GYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAI 462
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D VTFN +ISGL ++G+ EE LL M+ K P+ ++ +L L D R EA+E +
Sbjct: 463 DAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFM 522
Query: 327 ------GRMICERMS-----------------PSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
G++ + +S P+ V++ + I+ LC Q +D ++++
Sbjct: 523 SGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQE 582
Query: 364 MVQQGFV 370
Q+G +
Sbjct: 583 STQKGII 589
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 149/344 (43%), Gaps = 41/344 (11%)
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDYN---------------PNEALYTLIIN---KLAQ 103
+K FS D +S ++L+ K+ N PN + ++++ KL
Sbjct: 74 MKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGW 133
Query: 104 AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSV 163
K + DIM R V R + K G+I +A +M + P V
Sbjct: 134 LKEAAEVIDIMARNNVLPDVRTYTTLIGGLCK-----DGKIDEAFRLRDEMENLKLLPHV 188
Query: 164 KTFNLVLN-------LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
T+N+++N L +L E++G GV+ +A N+++K + G ++
Sbjct: 189 VTYNMLINGCFECSSSLKGFELIDEMEG-------KGVKPNAVTYNVVVKWYVKEGKMDN 241
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A L + + P+ T++TL +G C+ G + EAF +++ M +G+ ++VT N ++
Sbjct: 242 AGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILH 301
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
L + K+++ KLL +G + + SY ++ G + E+ + I P
Sbjct: 302 TLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEII----P 357
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
S ++Y +I GLC + ++++ G VP + I+
Sbjct: 358 SIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTII 401
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 136/319 (42%), Gaps = 41/319 (12%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN Y +++ + + D + ++ K+E+ D +N + AGR+
Sbjct: 217 KGVKPNAVTYNVVVKWYVKEGKMDNAGNELR--KMEESGFSPDCVTFNTLSNGYCKAGRL 274
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S+A + +M + T N +L+ L + + + +SA+K G +D L
Sbjct: 275 SEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTL 334
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL--------------------- 243
+ G + G DE ++ P++ TY T++ GL
Sbjct: 335 IMGYFKVGKSXX----WDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGL 390
Query: 244 --------------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
C +G V++AF +M + D T NIL+ GL +G +++ +K
Sbjct: 391 VPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALK 450
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
L + KG ++ ++ ++ GL ++ RF EA +L+ M +++ P ++ ++ L
Sbjct: 451 LFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALA 510
Query: 350 NQKLVEDVDWVLKKMVQQG 368
+ +++ + + +V+QG
Sbjct: 511 DAGRMKEAEEFMSGIVEQG 529
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 201 LNILLKGLCENGNLEAAFY---VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
LN L+K L + + + + + K E N T++ L+ G C + + EA GL+
Sbjct: 13 LNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIG 72
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+M+ D V++N ++ L K+GK+ E LL MK G +PN ++ ++ G
Sbjct: 73 KMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLG 132
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
EA E++ M + P +Y LI GLC +++ + +M +P + +
Sbjct: 133 WLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYN 192
Query: 378 EIV-GC 382
++ GC
Sbjct: 193 MLINGC 198
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 115/257 (44%), Gaps = 25/257 (9%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K+ P+ Y +I L ++ + D D + L D YN I + G
Sbjct: 351 KEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGL--VPDQTTYNTIILGYCREG 408
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ KA M + P + T N+++ L + + + ++ + G IDA N
Sbjct: 409 QVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFN 468
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA----FGLLE- 257
++ GLCE G E AF +L E ++ P+ T++ ++ L + G ++EA G++E
Sbjct: 469 TIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQ 528
Query: 258 -RMESEGI-----------------DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+++ + I D ++V F+ I+ L QGK ++ M +++ KG
Sbjct: 529 GKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGI 588
Query: 300 YPNSASYQEVLYGLLDK 316
+ ++Y ++ GL+ +
Sbjct: 589 ILHKSTYISLMEGLIKR 605
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 162/348 (46%), Gaps = 23/348 (6%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPN----EALYTLIIN----------KL 101
+SP+ V +FS DP + ++ + S+ Y + +L TL+IN +L
Sbjct: 88 ISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRL 147
Query: 102 AQAKRFDAIEDIMQRI----KVEKLCRFSDGF-----FYNVIKIYGNMAGRISKAIETLF 152
K D++ D + + K+ K RF + YN + G + + +
Sbjct: 148 LMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M P++ T+N ++N E + + G++ D L+ G C+
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+L++AF V +E P + C N Y+ L+HGLC ++EA L +M+ + T+
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
+LI L + E + L++ M+ G PN +Y ++ L + +F +A+EL+G+M+ +
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P+ ++Y LI+G C + ++ED V++ M + P + E++
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 140/289 (48%), Gaps = 15/289 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------G 142
PN YT++I+ L +F+ +++ ++ +EK G NVI Y + G
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQM-LEK------GLMPNVI-TYNALINGYCKRG 407
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
I A++ + M S P+ +T+N ++ + ++ + G+ + V D N
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYN 466
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C +GN ++A+ +L + P+ TY++++ LC+ VEEA L + +E +
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G++ + V + LI G K GKV+E +LE+M K C PNS ++ +++GL + EA
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L +M+ + P+ + LIH L + ++M+ G P
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 145/313 (46%), Gaps = 21/313 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P++ YT +I+ L ++KR + D+ ++ +K + + +I Y AG++ +A
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLE-QKGVNPNVVMYTALIDGYCK-AGKVDEAH 552
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M S NC P+ TFN +++ L + E + K+G++ IL+ L
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
++G+ + A+ + +P+ TY+T + C +G + +A ++ +M G+ D
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK----------- 317
T++ LI G G+ +L+RM+ GC P+ ++ ++ LL+ K
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 318 -------RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ-QGF 369
F EL+ +M+ ++P+ SY+KLI G+C + + V M + +G
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792
Query: 370 VPRMGMWREIVGC 382
P ++ ++ C
Sbjct: 793 SPSELVFNALLSC 805
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 3/292 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +IN + + D+++ ++ KL + YN + I G + KA+
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLS--PNTRTYNEL-IKGYCKSNVHKAM 447
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M P V T+N +++ + + + + G+ D ++ L
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++ +E A + D ++ PNV Y+ L+ G C+ G V+EA +LE+M S+ ++
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+TFN LI GL GK++E L E+M G P ++ +++ LL F A +
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ P +Y I C + + D + ++ KM + G P + + ++
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 136/313 (43%), Gaps = 7/313 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
+ D + V+ ++ + + +PN Y +I ++ A+ ++ ++ K+ D
Sbjct: 409 IEDAVDVVELM----ESRKLSPNTRTYNELIKGYCKSNVHKAM-GVLNKMLERKV--LPD 461
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
YN + +G A L M P T+ +++ L +K E ++
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
S + GV + L+ G C+ G ++ A +L++ +NC PN T++ L+HGLC G
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++EA L E+M G+ T ILI L K G + ++M G P++ +Y
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ + R +A++++ +M +SP +Y LI G + VLK+M
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 368 GFVPRMGMWREIV 380
G P + ++
Sbjct: 702 GCEPSQHTFLSLI 714
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 57/262 (21%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
P+ YT I + R ED+M +++ + D F Y+ +IK YG++ G+ + A
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS--PDLFTYSSLIKGYGDL-GQTNFA 691
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M C PS TF ++ L+ K YG+ +G E + C ++ +++
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLEMK-YGKQKG---------SEPELCAMSNMME- 740
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-SEGIDA 266
+ +L++ + + PN ++Y L+ G+CE GN+ A + + M+ +EGI
Sbjct: 741 ------FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Query: 267 DTVTFN-----------------------------------ILISGLRKQGKVEEGMKLL 291
+ FN +LI GL K+G+ E G +
Sbjct: 795 SELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVF 854
Query: 292 ERMKGKGCYPNSASYQEVLYGL 313
+ + G Y + +++ ++ G+
Sbjct: 855 QNLLQCGYYEDELAWKIIIDGV 876
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 143/336 (42%), Gaps = 33/336 (9%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI--------------KVEKLCR-----F 125
K +P+ YT+II+ L AKRFD + +R+ V LC
Sbjct: 148 KGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDL 207
Query: 126 SDGFFYNVIK--------IYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+ VIK +Y + GR+ KA++ M C P + T+N++LN
Sbjct: 208 AYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLN 267
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
+ E + + + GVE D N LLKG C+ ++ A ++ E +
Sbjct: 268 YCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMC 327
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+V +Y+T++ C+ + + L E M +GI D VTFNILI ++G KLL
Sbjct: 328 DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLL 387
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ M P+ Y V+ L + A + M+ ++P +SY L++G C
Sbjct: 388 DEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKT 447
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
V D + +M +G P ++ IVG + GK
Sbjct: 448 SRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGK 483
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 8/235 (3%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A+E MPS P V ++ ++++ L +AK + E ++ G+ D
Sbjct: 134 RLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACV 193
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC G ++ A+ ++ K + N Y+ L+ G C G V++A + M
Sbjct: 194 ALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRT 253
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D VT+NIL++ ++G V+E ++L+E M+ G P+ SY E+L G A
Sbjct: 254 GCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRA 313
Query: 323 KELVGRMICERMSP----SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
M+ ERM VSY +I C + + ++M +G P M
Sbjct: 314 H----LMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDM 364
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%)
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
L DM S P + FN LNLL ++ S G + D I++ LC
Sbjct: 107 LLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCN 166
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
+ A V + P+ + L+ GLC G V+ A+ L+ + G+ +++
Sbjct: 167 AKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLV 226
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+N LI G + G+V++ MK+ M GC P+ +Y +L ++ EA LV M
Sbjct: 227 YNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETME 286
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+ P SY +L+ G C +V+ ++ + +Q
Sbjct: 287 RSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQ 322
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 111/256 (43%), Gaps = 8/256 (3%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDA---IEDIMQRIKVEKLCRFSDGFFYNVI 134
+ + R P+ Y +++N + D + + M+R VE D + YN +
Sbjct: 246 IKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVE-----PDLYSYNEL 300
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
A + +A + + V ++N V+ A+ + ++ G+
Sbjct: 301 LKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGI 360
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D NIL+ G+ +LDE K P+ Y+ ++ LC+ G V+ A
Sbjct: 361 RPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHS 420
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ M G++ D +++N L++G K +V + M L + M+ KG YP+ +Y+ ++ GL+
Sbjct: 421 VFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLI 480
Query: 315 DKKRFPEAKELVGRMI 330
K+ A + +M+
Sbjct: 481 RGKKISLACRVWDQMM 496
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 4/237 (1%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-SAKLYGEIQGIYTSAAKLGVEIDAC 199
AG I++AI M NC +N + +L+ ++L+ G +
Sbjct: 23 AGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLPF 82
Query: 200 CLNILLKGLCE---NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ + LC N NL +L + P++ ++T ++ LC + +E A L
Sbjct: 83 TYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELF 142
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M S+G D D V++ I+I L + +E K+ R+ KG P+ + ++ GL
Sbjct: 143 HSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSG 202
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
R A ELV +I + + + Y LI G C V+ + M + G VP +
Sbjct: 203 GRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDL 259
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 39/187 (20%)
Query: 208 LCENGNLEAAFYVLDEFPKQNCEP--------------NVR------------------- 234
L + G + A Y+ D+ + NC + R
Sbjct: 20 LVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSL 79
Query: 235 ---TYSTLMHGLCEKG---NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
TYS + LC N+ LL M+S G D FN ++ L +Q ++E +
Sbjct: 80 LPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETAL 139
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+L M KG P+ SY ++ L + KRF EA ++ R+I + +SP + + L+ GL
Sbjct: 140 ELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGL 199
Query: 349 CNQKLVE 355
C+ V+
Sbjct: 200 CSGGRVD 206
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 77/217 (35%), Gaps = 39/217 (17%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIM-QRIKVEKLCRFSDGFFYNVIKIYGNMA 141
+R P+ Y ++ +A D +M +R++ + +C D YN + A
Sbjct: 286 ERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMC---DVVSYNTVITAFCKA 342
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLL-------VSAKLYGEI------------ 182
R K E +M P + TFN++++ V KL E+
Sbjct: 343 RRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFY 402
Query: 183 ----------------QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
++ + GV D N LL G C+ + A ++ DE
Sbjct: 403 TAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQS 462
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+ P+ TY ++ GL + A + ++M G
Sbjct: 463 KGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERG 499
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 138/310 (44%), Gaps = 3/310 (0%)
Query: 73 SVISVLNQYSKRKDYNPNEAL--YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
S+ LN + NP ++ +TL++ + + K + +++ + L D F
Sbjct: 55 SIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMH-SSLGIKPDTFI 113
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
NV+ ++ L M PSV TF +++N L G +
Sbjct: 114 LNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVE 173
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
K G D +L+ GLC+ G A L + ++N PNV YST+M GLC+ G V
Sbjct: 174 KTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVS 233
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA GL M +GI + VT+ LI GL G+ +E LL+ M G P+ S ++
Sbjct: 234 EALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILV 293
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
L + + +AK ++G MI P +Y LI C Q +++ V + MV +G +
Sbjct: 294 DVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCL 353
Query: 371 PRMGMWREIV 380
P + + ++
Sbjct: 354 PDIVAYTSLI 363
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 2/236 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P N+V+N L KL + + KLG+E IL+ GLC G++ A +
Sbjct: 109 PDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVEL 168
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+D K +V+TY L++GLC+ G EA G L +ME + + V ++ ++ GL K
Sbjct: 169 VDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCK 228
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G V E + L M GKG PN +Y ++ GL + R+ EA L+ M+ + P S
Sbjct: 229 DGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQS 288
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTFGKDNRNRVY 394
L+ LC + + V+ M+ G VP + + ++ C+ D RV+
Sbjct: 289 LNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVF 344
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 2/261 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +T++IN L +++ VEK SD Y V+ G+ S+A+
Sbjct: 144 PSVVTFTILINGLCVKGDVGRAVELVDH--VEKTGYRSDVKTYGVLINGLCKMGKTSEAV 201
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M N P+V ++ V++ L L E G+ + G++ + L++GL
Sbjct: 202 GWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGL 261
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G + A +LDE K P++++ + L+ LC++G + +A ++ M G D
Sbjct: 262 CNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDV 321
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N LI Q +++E ++ E M +GC P+ +Y +++G K +A L+
Sbjct: 322 FTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDE 381
Query: 329 MICERMSPSFVSYKKLIHGLC 349
MI +P V++ LI G C
Sbjct: 382 MIKVGFTPDVVTWTTLIGGFC 402
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 117/282 (41%), Gaps = 30/282 (10%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFD-----AIEDIMQRIK---------VEKLCRFSDG 128
+ +++NPN +Y+ +++ L + +E + IK ++ LC F
Sbjct: 208 EERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNF--- 264
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
GR +A L +M P +++ N+++++L + + +
Sbjct: 265 -------------GRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGF 311
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+G D N L+ C ++ A V + + C P++ Y++L+HG C+ N
Sbjct: 312 MILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKN 371
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ +A LL+ M G D VT+ LI G + G+ +L M G PN +
Sbjct: 372 INKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAI 431
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+L GL + EA L M + + V Y ++ G+C+
Sbjct: 432 ILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCS 473
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 124/318 (38%), Gaps = 33/318 (10%)
Query: 85 KDYNPNEALYTLIINKLAQAKRF----DAIEDIMQ----------RIKVEKLCR------ 124
K PN YT +I L R+ ++++M+ I V+ LC+
Sbjct: 245 KGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQ 304
Query: 125 -------------FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
D F YN + + ++ +A M S C P + + +++
Sbjct: 305 AKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIH 364
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
K + + K+G D L+ G C+ G AA + K P
Sbjct: 365 GWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVP 424
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N++T + ++ GLC+ + EA L ME +D + V ++I++ G+ GK+ ++L
Sbjct: 425 NLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELF 484
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ KG N +Y ++ G + +A++L+ M P +Y + GL +
Sbjct: 485 SCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAE 544
Query: 352 KLVEDVDWVLKKMVQQGF 369
+ + L M +GF
Sbjct: 545 REIARSIKYLTMMRDKGF 562
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 50/239 (20%)
Query: 89 PNEALYTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRFSDGFFYNVIK---IYGNM--AG 142
P+ YT +I+ + K + A+ + + IKV GF +V+ + G G
Sbjct: 354 PDIVAYTSLIHGWCKIKNINKAMHLLDEMIKV--------GFTPDVVTWTTLIGGFCQVG 405
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R A E +M Y P+++T ++L+ L ++L E ++ + K ++++ +
Sbjct: 406 RPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYS 465
Query: 203 ILLKGLCENGNLEAAF-------------------YVLDEFPKQN--------------- 228
I+L G+C G L A +++ F KQ
Sbjct: 466 IILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEEN 525
Query: 229 -CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR-KQGKVE 285
C P+ TY+ + GL + + + L M +G D T ++I+ L QG E
Sbjct: 526 GCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGDNE 584
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ LFD+ P+V TFN+V++ L E + ++ +G D N L+ G
Sbjct: 188 VRRLFDLLPV---PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDG 244
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ G+LE ++ E K C +V TY+ L++ + G +E+A+ M+ +G+ A+
Sbjct: 245 YGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVAN 304
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VTF+ + K+G V+E MKL +M+ +G PN +Y ++ G R +A L+
Sbjct: 305 VVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLD 364
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
M+ + + P+ V+Y ++ GLC + V + D VL M + G
Sbjct: 365 EMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGG 405
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 144/349 (41%), Gaps = 38/349 (10%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y +I+ + + +E ++ ++ +D YN + + GR+ KA
Sbjct: 232 SPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCA--ADVVTYNALINCFSKFGRMEKA 289
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M +V TF+ ++ L E ++ G+ + L+ G
Sbjct: 290 YSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDG 349
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG-------------------- 247
C+ G L+ A +LDE Q PNV TY+ ++ GLC++G
Sbjct: 350 TCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKAN 409
Query: 248 ---------------NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
N E A LL +M+++G++ D + LI GL K KV+E LL
Sbjct: 410 ELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLH 469
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+M G G PN+ Y ++ L + EA L+ +++ P+ V+Y LI GLC
Sbjct: 470 KMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAG 529
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETVD 400
+ + KM + G P + + ++ G G N+ + E +D
Sbjct: 530 SISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMID 578
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 148/318 (46%), Gaps = 11/318 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
PN + ++I+ L K + +E ++++ + D YN +I YG G + +
Sbjct: 198 PNVFTFNIVIDFLC--KEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK-CGDLEEV 254
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNIL 204
+ + +M C V T+N ++N +G ++ Y+ ++ GV + +
Sbjct: 255 EQLVSEMRKSGCAADVVTYNALINCFSK---FGRMEKAYSYFGEMKRQGVVANVVTFSTF 311
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ C+ G ++ A + + + PN TY++L+ G C+ G +++A LL+ M +G+
Sbjct: 312 VDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 371
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ VT+ +++ GL K+GKV E +L M+ G N Y +++G A +
Sbjct: 372 VPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALD 431
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV- 383
L+ +M + M Y LI GLC + V++ +L KM G P ++ I+ +
Sbjct: 432 LLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALF 491
Query: 384 TFGKDNRNRVYVTETVDS 401
GK++ + + +DS
Sbjct: 492 KAGKESEAVALLHKILDS 509
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGR+ AI L +M P+V T+ ++++ L E + + + GV+ +
Sbjct: 353 AGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELL 412
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G N N E A +L++ + E +V Y TL+ GLC+ V+EA LL +M
Sbjct: 413 YTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMA 472
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ +TV + ++ L K GK E + LL ++ G PN +Y ++ GL
Sbjct: 473 GCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSIS 532
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
EA +M + P+ +Y LI G C + ++ +M+ +G
Sbjct: 533 EAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGM 581
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 124/287 (43%), Gaps = 10/287 (3%)
Query: 89 PNEALYTLIINKLAQAKRF---DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN-MAGRI 144
PN YT++++ L + + D + +M+R V+ ++ Y + I+G+ M
Sbjct: 373 PNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVK-----ANELLYTTL-IHGHFMNNNS 426
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A++ L M + V + ++ L + E + + A G+ + +
Sbjct: 427 ERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTI 486
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ L + G A +L + +PNV TY L+ GLC+ G++ EA +M G+
Sbjct: 487 MDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGL 546
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D + + LI G K G + + M L+ M KG + Y ++ G + + +A
Sbjct: 547 DPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFA 606
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L +MI + Y I G CN ++++ VL +M+ G P
Sbjct: 607 LKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITP 653
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 113/269 (42%), Gaps = 14/269 (5%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA- 141
+R NE LYT +I+ + D++ ++K + G +V +YG +
Sbjct: 402 ERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK-------NKGMELDV-SLYGTLIW 453
Query: 142 -----GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
++ +A L M P+ + +++ L A E + G +
Sbjct: 454 GLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQP 513
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ L+ GLC+ G++ A ++ + +PNV+ Y+ L+ G C+ G++ +A L+
Sbjct: 514 NVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLM 573
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M +G+ D V + LI G KQ +++ L +M G + Y + G +
Sbjct: 574 NEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNM 633
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLI 345
EA+ ++ MI ++P Y LI
Sbjct: 634 NMMQEARGVLSEMIGTGITPDKTVYNCLI 662
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 105/232 (45%), Gaps = 3/232 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ +LNQ K K + +LY +I L + ++ D + ++ ++ L + Y I
Sbjct: 430 LDLLNQM-KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGL--RPNTVIYTTI 486
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
AG+ S+A+ L + P+V T+ +++ L A E + +LG+
Sbjct: 487 MDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGL 546
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ + L+ G C+ G+L A ++++E + + Y++L+ G ++ N+++AF
Sbjct: 547 DPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFA 606
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
L +M G+ D + ISG ++E +L M G G P+ Y
Sbjct: 607 LKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVY 658
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-----AGR 143
PN +YT I++ L +A + ++ +I GF NV+ + AG
Sbjct: 478 PNTVIYTTIMDALFKAGKESEAVALLHKI-------LDSGFQPNVVTYCALIDGLCKAGS 530
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
IS+AI M P+V+ + +++ + + G+ +D
Sbjct: 531 ISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTS 590
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G + NL+ AF + + + + ++ Y+ + G C ++EA G+L M G
Sbjct: 591 LIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTG 650
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
I D +N LI +K G +EE L M+
Sbjct: 651 ITPDKTVYNCLIRKYQKLGNMEEASSLQNEME 682
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 139/303 (45%), Gaps = 16/303 (5%)
Query: 86 DY--NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-- 141
DY +P+ Y ++N L + R + ++ + G N++ +YG +
Sbjct: 306 DYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCS-------GLKPNIV-VYGTLVDG 357
Query: 142 ----GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
G+ ++A + L +M S P+ ++ ++ L G + K+G+ D
Sbjct: 358 FMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPD 417
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L++G + + + AF +L+E PNV +Y +++GLC+ G +EA LLE
Sbjct: 418 TFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLE 477
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M SEG+ + + LI G K+G + + LE+M +P+ Y ++ GL
Sbjct: 478 EMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVG 537
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
R EA+E ++ + P +Y LIHG C +E D +L++M+ G P +
Sbjct: 538 RMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYT 597
Query: 378 EIV 380
+++
Sbjct: 598 DLL 600
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 6/233 (2%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA---KLYGEIQGIYTSAAKLGVEIDA 198
G + A + + M P+ + N +L L+ A +L +++G A G+ D
Sbjct: 187 GSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGA---GILPDV 243
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+ ++ C+ + +AA V +E +++C N TY+ ++ GLC G VEEAFG E
Sbjct: 244 YTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEE 303
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G+ D T+ L++GL K +++E LL+ M G PN Y ++ G + + +
Sbjct: 304 MVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGK 363
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA +++ MI + P+ + Y LI GLC + +LK+M++ G P
Sbjct: 364 TAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRP 416
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 163/366 (44%), Gaps = 36/366 (9%)
Query: 31 FALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPN 90
LAS + QD+DH + SP+ +V+ VL K+ N
Sbjct: 150 LVLASIQRAIQDTDHRSR--------SPSP----------STAVLDVLVDTYKKTGSVRN 191
Query: 91 EALYTLIINKLAQAK-------------RFDAIEDIMQRIK--VEKLCRFSDGFFYNVIK 135
A L++ L A R DA+E ++ ++K +E D + Y+
Sbjct: 192 AAQVVLMMADLGLAPTRRCCNGLLKDLLRADAME-LLWKLKGFMEGAGILPDVYTYSTF- 249
Query: 136 IYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
I + R A + +F+ M +C + T+N++++ L + E G G+
Sbjct: 250 IEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGL 309
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
DA L+ GLC+ L+ A +LDE +PN+ Y TL+ G ++G EAF
Sbjct: 310 SPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFD 369
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+L+ M S G+ + + ++ LI GL K G++ KLL+ M G P++ +Y ++ G
Sbjct: 370 ILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHF 429
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ A EL+ M + P+ SY +I+GLC ++ +L++M+ +G P
Sbjct: 430 QQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 489
Query: 375 MWREIV 380
M+ ++
Sbjct: 490 MYAPLI 495
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 134/288 (46%), Gaps = 4/288 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AG 142
+ + +P+ Y +I L+ R + E+ +++ L D F Y+ + I+G G
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGL--VPDEFTYSGL-IHGYCKTG 572
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ KA + L M + P+ T+ +L + Y ++ I S G + D
Sbjct: 573 NLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYG 632
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I+++ L + N+E AF VL E K P++ YS+L+ GLC+ ++E+A GLL+ M E
Sbjct: 633 IVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKE 692
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G++ V +N LI G + G + + + + KG PN +Y ++ G +A
Sbjct: 693 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDA 752
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+L M+ ++P Y L G + +E ++ ++M +G+
Sbjct: 753 FDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA 800
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 124/297 (41%), Gaps = 11/297 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++IN L Q ++++ + E L + F Y + I + G IS A
Sbjct: 451 PNVYSYGIMINGLCQNGESKEAGNLLEEMISEGL--KPNAFMYAPLIIGHSKEGNISLAC 508
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M N P + +N ++ L + E + Y K G+ D + L+ G
Sbjct: 509 EALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGY 568
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ GNLE A +L + +PN TY+ L+ G + + E+ +L+ M G D
Sbjct: 569 CKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDN 628
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ I+I L + +E +L ++ G P+ Y ++ GL +A L+
Sbjct: 629 HIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDE 688
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
M E + P V Y LI G C + V ++ +G VP CVT+
Sbjct: 689 MAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPN---------CVTY 736
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 131/300 (43%), Gaps = 3/300 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ I +A+ FDA + + + ++ + C ++ YNV+ +G + +A
Sbjct: 241 PDVYTYSTFIEAHCKARDFDAAKKVFEEMR-RRDCAMNE-VTYNVMISGLCRSGAVEEAF 298
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M Y P T+ ++N L E + + + G++ + L+ G
Sbjct: 299 GFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGF 358
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G AF +L E +PN Y L+ GLC+ G + A LL+ M G+ DT
Sbjct: 359 MKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDT 418
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N L+ G +Q + +LL M+ G PN SY ++ GL EA L+
Sbjct: 419 FTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEE 478
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
MI E + P+ Y LI G + + L+KM + P + + ++ G T G+
Sbjct: 479 MISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGR 538
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 134/297 (45%), Gaps = 12/297 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK-- 146
PN+ +Y +I L + + +++ + K+ D F YN + M G +
Sbjct: 381 PNKIMYDNLIRGLCKIGQLGRASKLLKEMI--KVGLRPDTFTYNPL-----MQGHFQQHD 433
Query: 147 ---AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
A E L +M + P+V ++ +++N L E + G++ +A
Sbjct: 434 KDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 493
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G + GN+ A L++ K N P++ Y++L+ GL G +EEA +++ G
Sbjct: 494 LIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRG 553
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D T++ LI G K G +E+ +LL +M G PN+ +Y ++L G + +
Sbjct: 554 LVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVS 613
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ M+ P Y +I L + +E VL ++ + G VP + ++ ++
Sbjct: 614 SILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLI 670
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 131/313 (41%), Gaps = 19/313 (6%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
T++L+ + D V S+L D P+ +Y ++I L++++ + M +
Sbjct: 597 TDLLEGYFKSNDYEKVSSILQSMLGSGD-KPDNHIYGIVIRNLSRSENMEVA--FMVLTE 653
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
VEK D Y+ + + KA+ L +M P + +N +++ +
Sbjct: 654 VEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 713
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ ++ S G+ + L+ G C+NG++ AF + E + P+ Y+
Sbjct: 714 ISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNV 773
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L G + ++E+A L E M + G A+ FN L+ G K+GK++E KLL M +
Sbjct: 774 LATGCSDAADLEQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDRE 832
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
PN+ + ++V+ + EA + + ++ S Q +
Sbjct: 833 IVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKAS---------------QSATDRFS 877
Query: 359 WVLKKMVQQGFVP 371
+ M+ +G +P
Sbjct: 878 LLFTDMINKGLIP 890
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 139/306 (45%), Gaps = 15/306 (4%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF-SDGFFYNVIKIYGNMAGRISKAIETLF 152
+ +++ L ++ R + D+++ +K RF D YN++ + R A+ L
Sbjct: 174 FNTLLDILCKSNRVETAHDLLRTLK----SRFRPDTVSYNILANGYCLKKRTPMALRVLK 229
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M P++ T+N +L + E Y K EID ++ G E G
Sbjct: 230 EMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAG 289
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI-DADTVTF 271
++ A V DE K+ PNV TY+ L+ C+K +V+ A + E M EG+ + VTF
Sbjct: 290 EVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTF 349
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N++I GL G +E + +ERM G + +Y V+ D + E+ G+M
Sbjct: 350 NVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGD 409
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDV---DWVLKKMVQQGFVPRMGMWRE------IVGC 382
P+ +Y LI + +K ED+ +L +MV++GF+PR + I G
Sbjct: 410 GLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITGN 469
Query: 383 VTFGKD 388
F KD
Sbjct: 470 QDFAKD 475
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 113/224 (50%), Gaps = 7/224 (3%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ +I +A E +M C V ++ V++ A + + ++ K GV +
Sbjct: 253 SNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVAT 312
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L++ C+ +++ A V +E ++ C PNV T++ ++ GLC G++E A G +ERM
Sbjct: 313 YNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERM 372
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G+ A T+N++I G++E+G+++ +M C PN +Y ++ + +K+
Sbjct: 373 GEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKS 432
Query: 320 PE---AKELVGRMICERMSPSFVSYKKLIHGLC---NQKLVEDV 357
+ A +L+ M+ P ++ ++++GL NQ +D+
Sbjct: 433 EDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITGNQDFAKDI 476
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S PS KT ++ S + S + G+ D N LL LC++
Sbjct: 127 MRSLRLGPSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNR 186
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+E A +L K P+ +Y+ L +G C K A +L+ M GI+ VT+N
Sbjct: 187 VETAHDLLRTL-KSRFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNT 245
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
++ G + +++E + MK + C + SY V++G + +AK + M+ E
Sbjct: 246 MLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEG 305
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++P+ +Y LI C + V++ V ++MV++G
Sbjct: 306 VAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREG 340
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 11/234 (4%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+ +A+ T M + + +FN +L++L + + + K D
Sbjct: 150 GKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTL-KSRFRPDTVSY 208
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL G C A VL E ++ EP + TY+T++ G ++EA+ M+
Sbjct: 209 NILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKK 268
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ D V++ +I G + G+V++ ++ + M +G PN A+Y ++ K
Sbjct: 269 RKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQN 328
Query: 322 AKELVGRMICERM-SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
A + M+ E + SP+ V++ +I GLC+ V D++ L GF+ RMG
Sbjct: 329 AVAVFEEMVREGVCSPNVVTFNVVIRGLCH---VGDMERAL------GFMERMG 373
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 3/244 (1%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+PSY PS +F+ +++ + + + L + L IL + G
Sbjct: 94 LPSYTHSPS--SFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASIGK 151
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
A + ++ +++TL+ LC+ VE A LL ++S DTV++NI
Sbjct: 152 PHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSR-FRPDTVSYNI 210
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L +G + + +++L+ M +G P +Y +L G + EA E M +
Sbjct: 211 LANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRK 270
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRV 393
VSY +IHG V+ V +MV++G P + + ++ +N V
Sbjct: 271 CEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAV 330
Query: 394 YVTE 397
V E
Sbjct: 331 AVFE 334
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 4/274 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-YNVIKIYGNMAG 142
R +P+ ++ ++ N A+ D I +++ + L S G Y + G
Sbjct: 335 RNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWL---SPGVVNYGALIDALCKLG 391
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A+ M + P + F+ ++ L + + + + ++ G+ ++A N
Sbjct: 392 RVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFN 451
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ LC G + A ++D + + P+V +Y+TL+ G C G ++EA LL+ M S
Sbjct: 452 ILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSI 511
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D T+N L+ G K ++++ L M KG P +Y +L+GL RF EA
Sbjct: 512 GLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEA 571
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
KEL MI R +Y +++GLC V++
Sbjct: 572 KELYLNMINNRRKCDIYTYTIILNGLCRNNFVDE 605
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 133/336 (39%), Gaps = 37/336 (11%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
Q+ K PN YT +I+ ++ + ++Q + L D Y V+ Y
Sbjct: 226 QHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGL--QPDCVIYAVLLDYLC 283
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
GR ++A + P V + ++L+ + E+ + GV D
Sbjct: 284 KNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHH 343
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NI+ + ++ A ++ D+ +Q P V Y L+ LC+ G V++A +M
Sbjct: 344 IFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQM 403
Query: 260 ESEGIDADTVTF-----------------------------------NILISGLRKQGKV 284
+EG+ D F NIL+ L ++G+V
Sbjct: 404 INEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRV 463
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
E +L++ M P+ SY ++ G R EA +L+ M+ + P +Y L
Sbjct: 464 MEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTL 523
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+HG C + ++D + ++M+ +G P + + I+
Sbjct: 524 LHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTIL 559
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 5/315 (1%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N ++ ++ L AKR D DI+ R E C + YN++ R +A+E
Sbjct: 127 NTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTL-NVISYNILLKGLCNEKRAEEALE 185
Query: 150 TLFDMPS---YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
+ M + P+V T+ V++ L A++ +G++ GV + L+
Sbjct: 186 LMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIH 245
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G G + +L E +P+ Y+ L+ LC+ G EA + + + +GI
Sbjct: 246 GYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKP 305
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ IL+ G +G + E L+ M G P+ + + K EA +
Sbjct: 306 HVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIF 365
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTF 385
+M + +SP V+Y LI LC V+D +M+ +G P + ++ +V G T
Sbjct: 366 DKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTV 425
Query: 386 GKDNRNRVYVTETVD 400
K + E +D
Sbjct: 426 DKWEKAEKLFFEVLD 440
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 136/320 (42%), Gaps = 37/320 (11%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ PN YT +I+ L +A+ D + + Q + ++K R ++ + +I Y + G+ +
Sbjct: 198 HTPNVVTYTTVIDGLCKAQMVDRAKGVFQHM-IDKGVRPNNHTYTCLIHGYLS-TGKWKE 255
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
++ L +M ++ P + ++L+ L E + I+ S + G++ ILL
Sbjct: 256 VVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLH 315
Query: 207 GLCENGNL-----------------------------------EAAFYVLDEFPKQNCEP 231
G G L + A ++ D+ +Q P
Sbjct: 316 GYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSP 375
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
V Y L+ LC+ G V++A +M +EG+ D F+ L+ GL K E+ KL
Sbjct: 376 GVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLF 435
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ +G N+A + ++ L + R EA+ L+ M+ + P +SY L+ G C
Sbjct: 436 FEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLT 495
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
+++ +L MV G P
Sbjct: 496 GRIDEAAKLLDVMVSIGLKP 515
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 144/344 (41%), Gaps = 8/344 (2%)
Query: 42 DSDHHAYKLNHKDWLSPTEV-----LKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTL 96
D H + + WLSP V + L + NQ + P+ +++
Sbjct: 359 DEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMIN-EGVTPDIFVFSS 417
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS 156
++ L +++ E + + +++ R + FF N++ GR+ +A + M
Sbjct: 418 LVYGLCTVDKWEKAEKLFFEV-LDQGIRLNAAFF-NILMCNLCREGRVMEAQRLIDLMLR 475
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
+ P V ++N +++ E + +G++ D N LL G C+ ++
Sbjct: 476 VDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDD 535
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A+ + E + P V TY+T++HGL + G EA L M + D T+ I+++
Sbjct: 536 AYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILN 595
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
GL + V+E K+ + + K + + ++ LL R +A +L + + P
Sbjct: 596 GLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVP 655
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+Y+ + L + +E++D + M + G P M +V
Sbjct: 656 DVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALV 699
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 120/283 (42%), Gaps = 8/283 (2%)
Query: 90 NEALYTLIINKLAQAKRF---DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
N A + +++ L + R + D+M R+ V D YN + + GRI +
Sbjct: 446 NAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVR-----PDVISYNTLVDGHCLTGRIDE 500
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A + L M S P T+N +L+ A+ + ++ G+ N +L
Sbjct: 501 AAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILH 560
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GL + G A + + ++ TY+ +++GLC V+EAF + + + S+ +
Sbjct: 561 GLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQL 620
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T NI+I L K G+ E+ M L + G P+ +Y+ + L+ + E EL
Sbjct: 621 DIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELF 680
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
M +P+ L+ L ++ + L K+ ++ F
Sbjct: 681 SAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNF 723
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 8/236 (3%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
R D P+ Y +++ R D + D+M I ++ D F YN +
Sbjct: 475 RVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLK-----PDEFTYNTLLHGYCK 529
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A RI A +M P V T+N +L+ L + E + +Y + + D
Sbjct: 530 ARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYT 589
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
I+L GLC N ++ AF + ++ + ++ T + ++ L + G E+A L +
Sbjct: 590 YTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATIS 649
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ G+ D T+ ++ L K+G +EE +L M+ G PNS ++ LL +
Sbjct: 650 AYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHR 705
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 93/238 (39%), Gaps = 27/238 (11%)
Query: 85 KDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
K P Y I++ L Q RF +A E + I + C D + Y +I
Sbjct: 546 KGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKC---DIYTYTIILNGLCRNNF 602
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A + + S + + T N+++ L+ + ++ + + G+ D +
Sbjct: 603 VDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRL 662
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+ + L + G+LE + + PN R + L+ L +G++ A L +++ +
Sbjct: 663 IAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKN 722
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ T ++LIS + A YQ++ L +K RFP+
Sbjct: 723 FSLEASTTSMLIS-----------------------IYSRAEYQQLAKSLPEKYRFPQ 757
>gi|147792816|emb|CAN68810.1| hypothetical protein VITISV_001082 [Vitis vinifera]
Length = 577
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 115/216 (53%), Gaps = 2/216 (0%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
SVKTFN+VL+LL AKL E I A+ + D N +++ CE G+++ A ++
Sbjct: 124 SVKTFNVVLHLLREAKLADEALWILKKMAEFNIRADTVAYNSVIRLFCEKGDMDLAAGLM 183
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
E + PN+ TY T++ G C G +E+A L + M+ G + V + +++ G+ +
Sbjct: 184 KEMGLIDLYPNMITYVTMIKGFCNVGRLEDACKLFKVMKGHGCSPNVVVYTVILDGVCRF 243
Query: 282 GKVEEGMKLLERMKGKG--CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
G +E ++LL M+ + C PN +Y ++ +K + EA E++ RM +P+ V
Sbjct: 244 GSLERALELLGEMEKESGDCSPNVVTYTSMIQSCCEKGKLMEALEILDRMRACGCAPNRV 303
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
+ L+ G C + VE+ ++ K+V G V +G+
Sbjct: 304 TVSILMKGFCAEGRVEEAFKLIDKVVAGGNVSYVGL 339
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 51/228 (22%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+ +IK + N+ GR+ A + M + C P+V + ++L+
Sbjct: 198 YVTMIKGFCNV-GRLEDACKLFKVMKGHGCSPNVVVYTVILD------------------ 238
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ--NCEPNVRTYSTLMHGLCEKG 247
G+C G+LE A +L E K+ +C PNV TY++++ CEKG
Sbjct: 239 -----------------GVCRFGSLERALELLGEMEKESGDCSPNVVTYTSMIQSCCEKG 281
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+ EA +L+RM + G + VT +IL+ G +G+VEE KL++++ G + SY
Sbjct: 282 KLMEALEILDRMRACGCAPNRVTVSILMKGFCAEGRVEEAFKLIDKVVAGG----NVSY- 336
Query: 308 EVLYGLLDKKRFPEAKELVGRMICER----MSPSFVSYKKLIHGLCNQ 351
GL K+ EA +L R++ +R +P F S + G+ Q
Sbjct: 337 ---VGLSQKRHSVEAVKL-ARLMVDRGIQLKTPYFDSIVETPEGIWRQ 380
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 39/199 (19%)
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
N N A V++ + + +V+T++ ++H L E +EA +L++M I ADTV
Sbjct: 103 NQNPRAIIDVIEAYRVEGTVVSVKTFNVVLHLLREAKLADEALWILKKMAEFNIRADTVA 162
Query: 271 FNILI------------SGLRKQ-----------------------GKVEEGMKLLERMK 295
+N +I +GL K+ G++E+ KL + MK
Sbjct: 163 YNSVIRLFCEKGDMDLAAGLMKEMGLIDLYPNMITYVTMIKGFCNVGRLEDACKLFKVMK 222
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER--MSPSFVSYKKLIHGLCNQ-K 352
G GC PN Y +L G+ A EL+G M E SP+ V+Y +I C + K
Sbjct: 223 GHGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVVTYTSMIQSCCEKGK 282
Query: 353 LVEDVDWVLKKMVQQGFVP 371
L+E ++ +L +M G P
Sbjct: 283 LMEALE-ILDRMRACGCAP 300
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 147/314 (46%), Gaps = 29/314 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGNM-AGR 143
PN YT +I+ + ++ +I + + S+G N++ I G+ AG
Sbjct: 190 PNVVTYTALIHAYLKTRKLSRANEIFEMM-------LSNGCVPNIVTYTALIDGHCKAGE 242
Query: 144 ISKAIETL-------FDMPSYNCW----------PSVKTFNLVLNLLVSAKLYGEIQGIY 186
KA + D+P + + P+V T+ +++ L A E + +
Sbjct: 243 TEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLL 302
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ + G E + + L+ G C+ G L+ A V + C PNV TYS+L+ L +
Sbjct: 303 ETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKD 362
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
++ A +L +M + V + ++ GL K GK +E +L+ M+ KGCYPN +Y
Sbjct: 363 KRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTY 422
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ G R EL+ M + +P+F++Y+ LI+ C L++D +L++M Q
Sbjct: 423 TAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQ 482
Query: 367 QGFVPRMGMWREIV 380
+ +GM+R+++
Sbjct: 483 TYWPKHIGMYRKVI 496
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 144/364 (39%), Gaps = 63/364 (17%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDI--MQRIKVEKLCRFSDGFFYNVIKIYG-----N 139
Y P +Y ++I + + ++E I +R E L G N + +
Sbjct: 42 YQPGYVVYNILIGGICSTEDLPSMEVIGLAERAYNEML---EMGVVLNKVNVCNFTRCLC 98
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G+ KA + +M S P T++ V+ L +A + ++ + G+ D
Sbjct: 99 CIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVY 158
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH------------------ 241
LL C+ G +E A DE + C PNV TY+ L+H
Sbjct: 159 TYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMM 218
Query: 242 -----------------GLCEKGNVEEAFGLLERMESEGID-----------------AD 267
G C+ G E+A + RM+++ +D +
Sbjct: 219 LSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPN 278
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+ L+ GL K KV+E LLE M +GC PN Y ++ G + EA+E+
Sbjct: 279 VVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFT 338
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
+M+ SP+ +Y LI L K ++ VL KM++ P + ++ E+V G G
Sbjct: 339 KMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVG 398
Query: 387 KDNR 390
K +
Sbjct: 399 KTDE 402
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 147/369 (39%), Gaps = 82/369 (22%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK---------IYGN 139
PN YT +I+ +A + I R+K +K+ ++ ++ YG
Sbjct: 225 PNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGA 284
Query: 140 M------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ A ++ +A + L M C P+ ++ +++ E Q ++T G
Sbjct: 285 LVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHG 344
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ + L+ L ++ L+ A VL + + +C PNV Y+ ++ GLC+ G +EA+
Sbjct: 345 CSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAY 404
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL--- 310
L+ ME +G + VT+ +I G K G+V+ ++LL+ M KGC PN +Y+ ++
Sbjct: 405 RLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHC 464
Query: 311 --YGLLDK--KRFPEAKEL-----VG--RMICERMSPSFVS------------------- 340
GLLD K E K+ +G R + E S FV+
Sbjct: 465 CAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPV 524
Query: 341 YKKLIHGLCNQ-------------------------KLVEDVDWVLK---------KMVQ 366
YK LI L+E + K M +
Sbjct: 525 YKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTR 584
Query: 367 QGFVPRMGM 375
+GFVP + M
Sbjct: 585 RGFVPELSM 593
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 75/195 (38%), Gaps = 41/195 (21%)
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ----- 281
+ C P+ +++L+H C G+ A+ LL++M G V +NILI G+
Sbjct: 5 EGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPS 64
Query: 282 ------------------------------------GKVEEGMKLLERMKGKGCYPNSAS 305
GK E+ ++ M KG P+S++
Sbjct: 65 MEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSST 124
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y +V+ L + + +A +L M ++P +Y L+ C L+E +M
Sbjct: 125 YSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQ 184
Query: 366 QQGFVPRMGMWREIV 380
Q G P + + ++
Sbjct: 185 QDGCAPNVVTYTALI 199
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 103/237 (43%), Gaps = 5/237 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +YT +++ L + + D +M ++ EK C + + +I +G AGR+ + +
Sbjct: 382 PNVVIYTEMVDGLCKVGKTDEAYRLMLMME-EKGCYPNVVTYTAMIDGFGK-AGRVDRCL 439
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M S C P+ T+ +++N +A L + + + +++G
Sbjct: 440 ELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF 499
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ A+ +L E + P + Y L+ + G +E A L E + S A
Sbjct: 500 --SHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSA-AYQ 556
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
T+ LI L KV++ KL M +G P + ++ GLL ++ EA +L
Sbjct: 557 NTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 152/351 (43%), Gaps = 37/351 (10%)
Query: 40 HQDSDHHAYKLNH-KDWLSP-TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLI 97
H SD HA H +D LSP L + S + D S+ S S+ +NP I
Sbjct: 77 HILSDTHASASRHAEDLLSPRVSTLLLPSLVADGASLPSARRLISRLLFFNPLSVAAAAI 136
Query: 98 INKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY 157
+ A D++ R C S G +S A + ++ +
Sbjct: 137 ADS-----DCTATADLLVRA-----CLNSPA------------PGSLSCAADAFLELSTR 174
Query: 158 NCWPSVKTFNLVLNLL-------VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
PS+KT N+++ L ++ K++GE++ A D +++K LC
Sbjct: 175 GASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAP------DVYTYTVMIKALCR 228
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G ++AAF +L E + +P V TY+ LM LC G VEEAF L RM + VT
Sbjct: 229 AGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVT 288
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
F ILI+GL + + E +L+ M+G G PN Y +++ + EA L M+
Sbjct: 289 FGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMV 348
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ + + V+Y + LC + +E + +L +M+ G ++ +V
Sbjct: 349 SKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVA 399
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 136/307 (44%), Gaps = 16/307 (5%)
Query: 63 KIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL 122
K+F +RD +V P+ YT++I L +A DA + ++E+
Sbjct: 201 KVFGEMRDGNAV-------------APDVYTYTVMIKALCRAGEIDAA--FVMLAELERS 245
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
YNV+ +GR+ +A + M PS+ TF +++N L + +GE+
Sbjct: 246 GIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEV 305
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ G+ + N L+ C G+ A + DE + + V TY+ +
Sbjct: 306 DAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKA 365
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILIS-GLRKQGKVEEGMKLLERMKGKGCYP 301
LC++G +E A +L+ M G+ FN +++ LR G+++ ++L+ M + P
Sbjct: 366 LCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKP 425
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N A + L + + EA E+ ++ + + + + LIHGLC +++ VL
Sbjct: 426 NDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVL 485
Query: 362 KKMVQQG 368
K MV G
Sbjct: 486 KAMVDSG 492
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 7/270 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRISKAIETLF 152
Y ++I +A + + E I R + K D F +N ++ Y N+ G++ + L
Sbjct: 500 YNIMIQFCCKASKME--EAIQLRDDMIKRGFKPDLFTFNTFLRAYCNL-GKVEDILHLLD 556
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M S P + T+ +++ AK + K G+ +A N L+ G NG
Sbjct: 557 QMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNG 616
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
++ A VLD +P TY++LM+ +C G VEEA + + + I+ + +
Sbjct: 617 SISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYT 676
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
I+I G K GK++E + + M + PN +Y ++Y EA +L M+
Sbjct: 677 IIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSS 736
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+ P VSY LI G C V+ +D +++
Sbjct: 737 GIVPDTVSYNTLISGCCE---VDSLDKIVE 763
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 140/329 (42%), Gaps = 38/329 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + ++IN LA+ +RF ++ ++Q ++E + YN + + G S+A+
Sbjct: 284 PSIVTFGILINGLARGQRFGEVDAVLQ--EMEGFGITPNEVIYNQLIGWHCREGHCSEAL 341
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL---- 204
+M S +V T+NL+ L + I G+ + N +
Sbjct: 342 RLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWH 401
Query: 205 LKG--------------------------------LCENGNLEAAFYVLDEFPKQNCEPN 232
L+G LC+ G E A + + N
Sbjct: 402 LRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVN 461
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ T + L+HGLC+ N++EA +L+ M G++ D +T+NI+I K K+EE ++L +
Sbjct: 462 IATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRD 521
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M +G P+ ++ L + + + L+ +M E + P V+Y +I G C K
Sbjct: 522 DMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAK 581
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
V + L ++++ G P ++ ++G
Sbjct: 582 DVHKANKYLIELIKNGLRPNAVIYNALIG 610
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+ +A E F + ++ T N +++ L E + + GVE D
Sbjct: 441 GKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITY 500
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NI+++ C+ +E A + D+ K+ +P++ T++T + C G VE+ LL++M+S
Sbjct: 501 NIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKS 560
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EG+ D VT+ +I G K V + K L + G PN+ Y ++ G +
Sbjct: 561 EGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISD 620
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF-VPRMGMWREIV 380
A ++ M + P+ ++Y L++ +C+ LVE+ + + + + + +G I
Sbjct: 621 AIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQ 680
Query: 381 GCVTFGKDNRNRVYVTE 397
G GK + +Y E
Sbjct: 681 GFCKIGKIDEAVMYFKE 697
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+N+++ A E + K G + D N L+ C G +E ++LD+
Sbjct: 499 TYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQM 558
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ +P++ TY T++ G C+ +V +A L + G+ + V +N LI G + G +
Sbjct: 559 KSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSI 618
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ + +L+ MK G P +Y ++Y + EAKE+ + I + + + Y +
Sbjct: 619 SDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTII 678
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I G C +++ K+M + P
Sbjct: 679 IQGFCKIGKIDEAVMYFKEMHYRDIRP 705
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 1/278 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y LI L + + E I+ + + + F +V+ + GR+ + + +
Sbjct: 359 YNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCS-LFNSVVAWHLRGTGRLDVVLRLIRE 417
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P+ + L + E I+ G+ ++ N L+ GLC+ N
Sbjct: 418 MVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNN 477
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A VL E + TY+ ++ C+ +EEA L + M G D TFN
Sbjct: 478 MKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNT 537
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+ GKVE+ + LL++MK +G P+ +Y ++ G K +A + + +I
Sbjct: 538 FLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNG 597
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P+ V Y LI G + D VL M G P
Sbjct: 598 LRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQP 635
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ + + + G Y + G
Sbjct: 74 SGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYF 133
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 134 FNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMR 193
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ +++ +L + M KG PN ++ ++ G R
Sbjct: 194 ASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVD 253
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + + P ++Y L++GLC + + ++ +M +G P + ++
Sbjct: 254 LAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLI 313
Query: 381 -GCVTFG 386
GC G
Sbjct: 314 DGCCKEG 320
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 124/252 (49%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+F+N++ G I A + + PSV ++N ++N + E + ++
Sbjct: 132 YFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 191
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 192 MRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGR 251
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V+ A + ++M S+ + D +T+N L+ GL K+G + + L++ M KG P+ +Y
Sbjct: 252 VDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTT 311
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + A E RMI E + V+Y LI GLC + D + +L++M+ G
Sbjct: 312 LIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVG 371
Query: 369 FVPRMGMWREIV 380
P G + I+
Sbjct: 372 LKPDTGTYTMII 383
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 109/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 199 PDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEI 258
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q P++ TY+TL++GLC+KG++ +A GL++ M +G+ D T+ LI G K
Sbjct: 259 YKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCK 318
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 319 EGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGT 378
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 379 YTMIINEFCKKGDVWKGSKLLKEMQRNGHVP 409
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ GLC+ G+L A ++DE + +P+ TY+TL+ G C++G+++ AF
Sbjct: 270 DJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHR 329
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+RM E I D V + LISGL ++G+ + K+L M G P++ +Y ++ K
Sbjct: 330 KRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKK 389
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+ +L+ M P V+Y L++G
Sbjct: 390 GDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 12/230 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISK 146
P+ Y+++IN L + D ++ + V+ L F I G+ GR+
Sbjct: 198 QPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTF---TTLIDGHCKNGRVDL 254
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+E M S P + T+N ++ L + G+ G++ D L+
Sbjct: 255 AMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLID 314
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVR----TYSTLMHGLCEKGNVEEAFGLLERMESE 262
G C+ G+L+AAF E K+ + N+R Y+ L+ GLC++G +A +L M S
Sbjct: 315 GCCKEGDLDAAF----EHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSV 370
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
G+ DT T+ ++I+ K+G V +G KLL+ M+ G P +Y ++ G
Sbjct: 371 GLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 139/310 (44%), Gaps = 17/310 (5%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN-------MAGRISK 146
Y +I+ + + F + ++Q + K + F +++ GN +G I+
Sbjct: 22 YCTMIHFVCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGNQRSDIYVFSGLITA 81
Query: 147 AIETLFDMPSYNC---------WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+E+ F + C W T VL L+ K + + G Y + G
Sbjct: 82 YLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLKYFKLVWGFYEEFLECGYPAS 141
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
NIL C+ G++ A V D K P+V +Y+TLM+G G+++E F L
Sbjct: 142 LYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKS 201
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M + G+ D T+++LI+GL K+ K++ +L + M KG PN ++ ++ G
Sbjct: 202 AMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 261
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
R A E+ +M+ + + P ++Y LI+GLC + + ++ +M +G P +
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYT 321
Query: 378 EIV-GCVTFG 386
++ GC G
Sbjct: 322 TLIDGCCKEG 331
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 128/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + E + +
Sbjct: 143 YFFNILXHRFCKEGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKS 201
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 202 AMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 261
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G + + L++ M KG P+ +Y
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYT 321
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + ++++M+
Sbjct: 322 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSV 381
Query: 368 GFVPRMGMWREIV 380
G P G + I+
Sbjct: 382 GLKPDTGTYTMII 394
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 110/218 (50%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P V T+++++N L ++ G+ + L+ G C+NG
Sbjct: 203 MHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + + Q+ P++ TY+TL++GLC+KG++ +A L++ M +G+ D +T+
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTT 322
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+G ++ + +RM + + +Y ++ GL + R +A++++ M+
Sbjct: 323 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVG 382
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P +Y +I+ +C + V +LK+M G P
Sbjct: 383 LKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAP 420
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 37/259 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A+
Sbjct: 210 PDVYTYSVLINGLCKESKMDXANELFDEMLVKGLV--PNGVTFTTLIDGHCKNGRVDLAM 267
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M S + P + T+N L+ GL
Sbjct: 268 EIYKQMLSQSLLPDLITYN-----------------------------------TLIYGL 292
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G+L A ++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 293 CKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V + LISGL ++G+ + K++ M G P++ +Y ++ + K + +L+
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKE 412
Query: 329 MICERMSPSFVSYKKLIHG 347
M + +PS V+Y L++G
Sbjct: 413 MQXDGHAPSVVTYNVLMNG 431
>gi|356498456|ref|XP_003518068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g17525, mitochondrial-like, partial [Glycine
max]
Length = 435
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 144/319 (45%), Gaps = 16/319 (5%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q K + N +Y +I+ L + ++M +K F+ I I+
Sbjct: 20 LLQLIKSRGVASNTMVYNTLIHALCRNGEVGRARNLMNEMKDPNDVTFN-------ILIF 72
Query: 138 GNM-AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G G A+ L S P V + +VL +L + E + +G +
Sbjct: 73 GYYKEGNSVWALILLEKSFSMGFVPDVVSVTMVLEILCNVGCTIEAAEVLDXIESMGGLL 132
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+KG CE GN++ + L + + C PNV TY+ L+ G CE ++ L
Sbjct: 133 DVVAXNTLIKGFCEAGNVKVGLHFLKQMESKGCLPNVDTYNVLISGFCESKMLDLVLDLF 192
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK--GKGCYPNSASYQEVLYGLL 314
M+++GI + VTF+ +I GL +G++E+G +LE M+ +G + Y ++YGLL
Sbjct: 193 NDMKTDGIKWNFVTFDTIIRGLCSEGRIEDGFSILESMEESKEGSRGHINPYNSIIYGLL 252
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ F + E + +M + P V +I C + +ED + + +M+ +G + +
Sbjct: 253 KQNXFDDTTEFLTKM--GNLFPRVVDKSLMIFEHCKKGSIEDAERLCDQMIDEGGISSIL 310
Query: 375 MWREIVGCVTFGKDNRNRV 393
++ C+ G + R+
Sbjct: 311 VYN----CLVHGFSQQGRI 325
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 124/276 (44%), Gaps = 43/276 (15%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + + L M S C P+V T+N++++ +K+ + ++ G++ +
Sbjct: 147 AGNVKVGLHFLKQMESKGCLPNVDTYNVLISGFCESKMLDLVLDLFNDMKTDGIKWNFVT 206
Query: 201 LNILLKGLCENGNLEAAFYVLD--EFPKQNCEPNVRTYSTLMHGL--------------- 243
+ +++GLC G +E F +L+ E K+ ++ Y+++++GL
Sbjct: 207 FDTIIRGLCSEGRIEDGFSILESMEESKEGSRGHINPYNSIIYGLLKQNXFDDTTEFLTK 266
Query: 244 ------------------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
C+KG++E+A L ++M EG + + +N L+ G +QG++
Sbjct: 267 MGNLFPRVVDKSLMIFEHCKKGSIEDAERLCDQMIDEGGISSILVYNCLVHGFSQQGRIX 326
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
E ++L+ M +P +++ V+ A +LV + P+ +Y LI
Sbjct: 327 EAVELMNEMIANNRFPIPSTFNVVI-------XVEGALKLVEEITARGCVPNTETYSSLI 379
Query: 346 HGLC-NQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LC N+ L + + ++ + + G +P +W ++
Sbjct: 380 DVLCRNENLXKAMXVFMEMIDKGGILPDQFIWNSML 415
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 4/178 (2%)
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+KGLC + F +L + N Y+TL+H LC G V A L+ M+
Sbjct: 3 ILMKGLCLTNRIVEGFKLLQLIKSRGVASNTMVYNTLIHALCRNGEVGRARNLMNEMK-- 60
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
D + VTFNILI G K+G + LLE+ G P+ S VL L + EA
Sbjct: 61 --DPNDVTFNILIFGYYKEGNSVWALILLEKSFSMGFVPDVVSVTMVLEILCNVGCTIEA 118
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E++ + V+ LI G C V+ LK+M +G +P + + ++
Sbjct: 119 AEVLDXIESMGGLLDVVAXNTLIKGFCEAGNVKVGLHFLKQMESKGCLPNVDTYNVLI 176
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 104/249 (41%), Gaps = 23/249 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGNMA-GR 143
PN Y ++I+ ++K D + D+ +K +DG +N + I G + GR
Sbjct: 167 PNVDTYNVLISGFCESKMLDLVLDLFNDMK-------TDGIKWNFVTFDTIIRGLCSEGR 219
Query: 144 ISKAIETLFDMPSY--NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
I L M + +N ++ L+ + + T L + L
Sbjct: 220 IEDGFSILESMEESKEGSRGHINPYNSIIYGLLKQNXFDDTTEFLTKMGNLFPRVVDKSL 279
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
I C+ G++E A + D+ + ++ Y+ L+HG ++G + EA L+ M +
Sbjct: 280 MIFEH--CKKGSIEDAERLCDQMIDEGGISSILVYNCLVHGFSQQGRIXEAVELMNEMIA 337
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
TFN++I VE +KL+E + +GC PN+ +Y ++ L + +
Sbjct: 338 NNRFPIPSTFNVVIX-------VEGALKLVEEITARGCVPNTETYSSLIDVLCRNENLXK 390
Query: 322 AKELVGRMI 330
A + MI
Sbjct: 391 AMXVFMEMI 399
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
+ LM GLC + E F LL+ ++S G+ ++T+ +N LI L + G+V L+ MK
Sbjct: 1 FXILMKGLCLTNRIVEGFKLLQLIKSRGVASNTMVYNTLIHALCRNGEVGRARNLMNEMK 60
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
PN ++ +++G + A L+ + P VS ++ LCN
Sbjct: 61 D----PNDVTFNILIFGYYKEGNSVWALILLEKSFSMGFVPDVVSVTMVLEILCN 111
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 135/299 (45%), Gaps = 2/299 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN ++ + + A+ D DI +++ + L D Y + GR+ A
Sbjct: 375 SPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLS--PDAVSYGALIDALCKLGRVDDA 432
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
M + P + F+ ++ L + + +++ ++ +G+ + N +L
Sbjct: 433 EVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCN 492
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G + ++D P+V +Y+TL+ G C G ++EA LLE M S G+ D
Sbjct: 493 LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPD 552
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+ ++N L+ G K G+++ +M G P +Y +L+GL KRF EAKEL
Sbjct: 553 SFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYL 612
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
MI +Y +++GLC V++ + + + +G + + ++G + G
Sbjct: 613 NMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKG 671
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 37/292 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +I+ L +A+ FD E + Q++ I +
Sbjct: 236 PDVVTYTTVIDGLCKAQLFDRAEAVFQQM--------------------------IDNGV 269
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ P++ T+N +++ +S + E+ + + G + + C LL L
Sbjct: 270 K-----------PNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYL 318
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+NG A + D + +P+V TY ++HG KG + E LL M + GI +
Sbjct: 319 CKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNH 378
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
FNI S K G +++ M + +M+ +G P++ SY ++ L R +A+ +
Sbjct: 379 HIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQ 438
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI E ++P V + L++GLC E V+ + +M+ G P + + I+
Sbjct: 439 MINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTIL 490
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +S+ + L M + P+ FN+ + + + I+ + G+ DA
Sbjct: 357 GALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSY 416
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ LC+ G ++ A ++ + P++ +S+L++GLC E+ L M +
Sbjct: 417 GALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLN 476
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
GI + V FN ++ L K+G+V EG +L++ ++ G P+ SY ++ G E
Sbjct: 477 VGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDE 536
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +L+ M+ + P SY L+HG C ++ +KM+ G P + + I+
Sbjct: 537 ASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTIL 595
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
V + C +IL+ C G+LE F K + + L++GLC+ V EA
Sbjct: 90 VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149
Query: 254 G-LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK---GCYPNSASYQEV 309
LL+RM G DTV++NIL+ GL + + EE ++LL M C PN SY V
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ G + + + L M+ + P V+Y +I GLC +L + + V ++M+ G
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269
Query: 370 VPR-------------MGMWREIV 380
P +G W+E+V
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVV 293
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 135/323 (41%), Gaps = 41/323 (12%)
Query: 97 IINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
++N L KR +A++ ++QR+ +L D YN++ R +A+E L M
Sbjct: 135 LLNGLCDGKRVGEAMDVLLQRMP--ELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMA 192
Query: 156 S---YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
++C P+V +++ V+N + + ++ G+ D ++ GLC+
Sbjct: 193 DDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQ 252
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+ A V + +PN+ TY+ L+HG G +E +LE M + G + T+
Sbjct: 253 LFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYG 312
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC- 331
L++ L K G+ E + M GKG P+ +Y +L+G K E +L+ M+
Sbjct: 313 SLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVAN 372
Query: 332 ----------------------------------ERMSPSFVSYKKLIHGLCNQKLVEDV 357
+ +SP VSY LI LC V+D
Sbjct: 373 GISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDA 432
Query: 358 DWVLKKMVQQGFVPRMGMWREIV 380
+ +M+ +G P + ++ +V
Sbjct: 433 EVKFNQMINEGVTPDIVVFSSLV 455
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 133/295 (45%), Gaps = 8/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDI---MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
P+ +++ ++ L +++ +E++ M + + F + N+ K GR+
Sbjct: 446 PDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCK-----EGRVM 500
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+ + + P V ++N +++ A E + +G++ D+ N LL
Sbjct: 501 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C+ G +++A+ + P V TY+T++HGL + EA L M + G
Sbjct: 561 HGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 620
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D T+NI+++GL K V+E +K+ + + KG N ++ ++ LL R +A +L
Sbjct: 621 WDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 680
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + V+Y+ ++ L + +E+ D + M + G P M +V
Sbjct: 681 FAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 735
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F YN + AGRI A M S P V T+N +L+ L K + E + +Y
Sbjct: 552 DSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELY 611
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G + D NI+L GLC++ ++ A + + + N+ T++ ++ L +
Sbjct: 612 LNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKG 671
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G E+A L + + G+ + VT+ +++ L ++G +EE L M+ G PNS
Sbjct: 672 GRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQML 731
Query: 307 QEVLYGLLDKKRFPEAKELVGRM 329
++ LL + A + ++
Sbjct: 732 NALVRRLLHRGDISRAGAYLSKL 754
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 138/326 (42%), Gaps = 30/326 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P Y I++ L Q KRF +++ + + ++ D + YN+I + + +AI
Sbjct: 586 PGVVTYNTILHGLFQTKRFSEAKELYLNM-INSGTKW-DIYTYNIILNGLCKSNCVDEAI 643
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ ++ S ++ TFN+++ L+ + ++ + G+ + ++++ L
Sbjct: 644 KMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENL 703
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
E G+LE + K PN + + L+ L +G++ A L +++ +
Sbjct: 704 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEA 763
Query: 269 VTFNILIS----------------------------GLRKQGKVEEGMKLLERMKGKGCY 300
T ++LIS ++K ++++ L M KG
Sbjct: 764 STTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLT 823
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P+ +Y +L+GL RF EAKEL MI R + +Y +++GLC V++ +
Sbjct: 824 PDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKM 883
Query: 361 LKKMVQQGFVPRMGMWREIVGCVTFG 386
+ + +G + + ++G + G
Sbjct: 884 FQSLCSKGLQLNIITFNIMIGALLKG 909
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 8/285 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN + I+ L + R + ++ I E + D YN + +AG I +A
Sbjct: 480 HPNIVFFNTILCNLCKEGRVMEGQRLVDSI--ECMGVRPDVISYNTLIDGHCLAGTIDEA 537
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNIL 204
+ L M S P ++N +L+ A G I Y+ K+ G+ N +
Sbjct: 538 SKLLEGMVSVGLKPDSFSYNTLLHGYCKA---GRIDSAYSHFRKMLSNGITPGVVTYNTI 594
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GL + A + + ++ TY+ +++GLC+ V+EA + + + S+G+
Sbjct: 595 LHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGL 654
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ +TFNI+I L K G+ E+ M L + G N +Y+ V+ L+++ E
Sbjct: 655 QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDS 714
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L M +P+ L+ L ++ + L K+ ++ F
Sbjct: 715 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNF 759
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 16/184 (8%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+ D N +L GL + G A + + N+ TY+ +++GLC+ V+EA
Sbjct: 821 GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEA 880
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
F + + + S+G+ + +TFNI+I L K G+ E+ M L + G P+ +Y+ V
Sbjct: 881 FKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAEN 940
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L+++ E L F++ +K L ++ L + ++++++Q+G + R
Sbjct: 941 LIEEGSLEEFDGL------------FLTMEKSGTPLDSRLL----NALVRRLLQRGDISR 984
Query: 373 MGMW 376
G +
Sbjct: 985 AGAY 988
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 5/221 (2%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
NEA + +I K A+R D + + + ++ L D YN I GR S+A E
Sbjct: 793 NEANSSALIKK---ARRIDDAYSLFREMLMKGLT--PDVVTYNTILHGLFQTGRFSEAKE 847
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
M + ++ T+N++LN L + E ++ S G++++ NI++ L
Sbjct: 848 LYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALL 907
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G E A + P P+V TY + L E+G++EE GL ME G D+
Sbjct: 908 KGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSR 967
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
N L+ L ++G + L ++ K +++ E++
Sbjct: 968 LLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELI 1008
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%)
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A+ + E + P+V TY+T++HGL + G EA L M + + T+NI
Sbjct: 807 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 866
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+++GL K V+E K+ + + KG N ++ ++ LL R +A +L +
Sbjct: 867 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 926
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ P V+Y+ + L + +E+ D + M + G
Sbjct: 927 LVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSG 961
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A RI A +M P V T+N +L+ L + E + +Y S +++
Sbjct: 804 ARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYT 863
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI+L GLC++ ++ AF + + + N+ T++ ++ L + G E+A L +
Sbjct: 864 YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIP 923
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D VT+ ++ L ++G +EE L M+ G +S ++ LL +
Sbjct: 924 ANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDIS 983
Query: 321 EAKELVGRM 329
A + ++
Sbjct: 984 RAGAYLSKL 992
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 126/317 (39%), Gaps = 40/317 (12%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK---IYGNM--AGRISKAI 148
Y +I+N L ++ D + Q LC S G N+I + G + GR A+
Sbjct: 626 YNIILNGLCKSNCVDEAIKMFQ-----NLC--SKGLQLNIITFNIMIGALLKGGRKEDAM 678
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +P+ +V T+ LV+ L+ E ++++ K G ++ LN L++ L
Sbjct: 679 DLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 738
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH--------------------------- 241
G++ A L + ++N T S L+
Sbjct: 739 LHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSS 798
Query: 242 GLCEKGN-VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
L +K +++A+ L M +G+ D VT+N ++ GL + G+ E +L M
Sbjct: 799 ALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ 858
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
N +Y +L GL EA ++ + + + + +++ +I L ED +
Sbjct: 859 MNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 918
Query: 361 LKKMVQQGFVPRMGMWR 377
+ G VP + +R
Sbjct: 919 FAAIPANGLVPDVVTYR 935
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 150/324 (46%), Gaps = 23/324 (7%)
Query: 54 DWLSPTEVLKIFSN---LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
D+L+ T+++ S LRD + V+ S R + P+ T+++ L R D
Sbjct: 148 DFLTYTKLVHGLSKAGRLRDAVQVLQ--EMVSAR--HVPDNTTLTVVVQSLCLGDRVDDA 203
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-----RISKAIETLF-DMPSYNCWPSVK 164
++++ + G N I + G R+ +A+ L ++ P +
Sbjct: 204 RELVEEM-------LHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIV 256
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T++ V++ L A G ++ ++ A N L+ G C G+++ A +L +
Sbjct: 257 TYSTVIDGLCKA---GRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKM 313
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
NC P+V TY+TLM C+ G +++A+ L ++M + + D VTF L+ GL +G++
Sbjct: 314 VDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 373
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
E+ ++LLE + +GC P +Y V+ G + +A+ELV P+ V+Y L
Sbjct: 374 EDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNIL 433
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQG 368
+ G C + L ++ +G
Sbjct: 434 VAGCCRAGRTDQALQYLDQLNSEG 457
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 150/324 (46%), Gaps = 10/324 (3%)
Query: 78 LNQYSKRKDYNPNEAL-YTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
L Y + D +P + L YT +++ L++A R DA++ + + + + D V+
Sbjct: 135 LGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHV---PDNTTLTVVV 191
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+ R+ A E + +M + T++ LV L +L + + + G
Sbjct: 192 QSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGF 251
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D + ++ GLC+ G L A +D F + +C P TY++L+ G C G+++EA
Sbjct: 252 TPDIVTYSTVIDGLCKAGRLRDA---VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIR 308
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL +M + D +T+ L+S K G++++ +L ++M P+ ++ ++ GL
Sbjct: 309 LLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLC 368
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ R +A EL+ + P+ +Y ++ G C V + ++ +GFVP
Sbjct: 369 GEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTV 428
Query: 375 MWREIV-GCVTFGKDNRNRVYVTE 397
+ +V GC G+ ++ Y+ +
Sbjct: 429 TYNILVAGCCRAGRTDQALQYLDQ 452
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 38/258 (14%)
Query: 160 WPS-VKTFNLVL-NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
+PS TF +VL L SAKL + G+ D LN +L LC+ + A
Sbjct: 6 YPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTA 65
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI---- 273
+ D+ + N TY L+H LC+ ++EA GLL M+S G++ T+ N+
Sbjct: 66 MALFDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGG 124
Query: 274 ------------------------------LISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
L+ GL K G++ + +++L+ M P++
Sbjct: 125 LCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDN 184
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVLK 362
+ V+ L R +A+ELV M+ M+ + ++Y L+ GLC ++L E V +L
Sbjct: 185 TTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLG 244
Query: 363 KMVQQGFVPRMGMWREIV 380
++ ++GF P + + ++
Sbjct: 245 EVTRRGFTPDIVTYSTVI 262
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 4/243 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +++ + R D ++ Q++ KL F V + G GR+ A+
Sbjct: 320 PDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE--GRMEDAL 377
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L ++ C P++ T+N V++ + + + + G + NIL+ G
Sbjct: 378 ELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGC 437
Query: 209 CENGNLEAAFYVLDEFPKQN--CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
C G + A LD+ + C +V Y+ ++ LC G ++A E M G
Sbjct: 438 CRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVP 497
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
TF ++ L K + ++ +LLE M G P + V+ +A EL
Sbjct: 498 AAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELA 557
Query: 327 GRM 329
+
Sbjct: 558 SEL 560
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEE-GMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M G +D+ TF +++ GL K+ G LL+ ++ +G P+ +L L D +
Sbjct: 1 MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
A L +M E + + +Y LIH LC +L+++ +L M +G P +
Sbjct: 61 DTTTAMALFDKMA-ELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119
Query: 378 EIVG 381
++G
Sbjct: 120 VVIG 123
>gi|359488082|ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Vitis vinifera]
Length = 498
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 137/287 (47%), Gaps = 2/287 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
YT++I + + ++++ + +E + D YN + Y G+ +++
Sbjct: 182 YTVLIELVCKHCGTVQAMEVLEDMAIEGC--YPDIVTYNSLVNYTCKQGKYEDTALIIYN 239
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+ S+ P+ T+N +L+ L + + E+ I NIL+ GLC+ G
Sbjct: 240 LLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGL 299
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A D+ NC P++ TY+TL+ LC++G V+EA LL + +T+NI
Sbjct: 300 LDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNI 359
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I GL K+G +E+ M+L M +G P+ +++ + +GL +A ++ M
Sbjct: 360 VIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRN 419
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+++ +IHGLC +K V+ VL+ MV P ++ I+
Sbjct: 420 QRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYSAII 466
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 88/168 (52%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N+L+ GLC+ G L+ A +LDE C P+ TY+T++ + + G ++A G
Sbjct: 108 DIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFW 167
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ +G A +T+ +LI + K + M++LE M +GCYP+ +Y ++ +
Sbjct: 168 KDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQ 227
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ + ++ ++ M P+ V+Y L+H LC ++VD +L M
Sbjct: 228 GKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIM 275
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 109/265 (41%), Gaps = 35/265 (13%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + AIE L +M C P T+N +L + + + G + + G
Sbjct: 123 GLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITY 182
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNC-------------------------------- 229
+L++ +C++ A VL++ + C
Sbjct: 183 TVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLS 242
Query: 230 ---EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
PN TY+TL+H LC G +E +L M + VT+NILI+GL K G ++
Sbjct: 243 HGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDR 302
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+ ++M C P+ +Y +L L + EA L+ + R SP ++Y +I
Sbjct: 303 AINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVID 362
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
GL + +E + +M+++GF P
Sbjct: 363 GLAKKGCMEKAMELYGEMIERGFAP 387
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 105/218 (48%)
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M + + P+V T+N+++N L L + D N LL L
Sbjct: 270 EILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAAL 329
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G ++ A ++L C P + TY+ ++ GL +KG +E+A L M G D
Sbjct: 330 CKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDD 389
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T L GL + VE+ + +L+ M + +++++ V++GL KK+ A +++
Sbjct: 390 ITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEM 449
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
M+ + P+ Y +I G+ ++E+ + + +K+ +
Sbjct: 450 MVSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTE 487
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + T+N+++ L L + + G DA N +L+ + ++G + A
Sbjct: 107 PDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGF 166
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ ++ C + TY+ L+ +C+ +A +LE M EG D VT+N L++ K
Sbjct: 167 WKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCK 226
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
QGK E+ ++ + G PN+ +Y +L+ L + E E++ M P+ V+
Sbjct: 227 QGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVT 286
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LI+GLC L++ +MV +P
Sbjct: 287 YNILINGLCKYGLLDRAINFFDQMVSHNCLP 317
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L+ LC G L A ++D ++N P + L+ GL + + E A +L+ M
Sbjct: 43 NEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVM 102
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D +T+N+L+ GL K+G ++ ++LL+ M GC P++ +Y +L + D F +
Sbjct: 103 SGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQ 162
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A + + ++Y LI +C VL+ M +G P + + +V
Sbjct: 163 AIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLV 221
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 98/244 (40%), Gaps = 19/244 (7%)
Query: 51 NHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
H W E+L I + P +V++ Y ++IN L + D
Sbjct: 261 THGYWDEVDEILLIMNTTSQPPTVVT-----------------YNILINGLCKYGLLDRA 303
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
+ ++ V C D YN + G + +A+ L + C P + T+N+V+
Sbjct: 304 INFFDQM-VSHNC-LPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVI 361
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
+ L + +Y + G D L GL +E A +L E K+N
Sbjct: 362 DGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQR 421
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
+ ++HGLC+K V+ A +LE M S + ++ +I G+ G +EE +L
Sbjct: 422 IKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYSAIIKGVGAAGMIEEANQL 481
Query: 291 LERM 294
+++
Sbjct: 482 HQKL 485
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%)
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T N ++ L +GK+ +L++ M + P S ++ GL+ + A ++
Sbjct: 38 DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 97
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
M+ P ++Y L+ GLC + L++ +L +M G P + I+ C+
Sbjct: 98 KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCM 154
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 142/291 (48%), Gaps = 2/291 (0%)
Query: 81 YSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
Y + Y P +T+I+N L + + A M+++ VE C + Y++I
Sbjct: 199 YIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKM-VELDCE-PEVVSYSIIIDSLCK 256
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+++A++ + M S P+V T+N ++ + ++ + + ++ + ++ D
Sbjct: 257 NRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVT 316
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+IL+ LC+ G + A V + + EP++ TYS+L+HG+C+ +E+ LL M
Sbjct: 317 FSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEML 376
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S I D VTF+I + K+G V E ++ M +G PN +Y ++ G +
Sbjct: 377 SRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMD 436
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA+++ M+ + +P +SY LI G C + +++ + +M +G P
Sbjct: 437 EARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTP 487
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 138/293 (47%), Gaps = 12/293 (4%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGNMA 141
D P Y++II+ L + + + D+ ++ S G V+ IYG
Sbjct: 239 DCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMR-------SIGISPTVVTYNSLIYGMCN 291
Query: 142 GRISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
K LF +M +N P V TF+++++ L + E ++ ++ +E D
Sbjct: 292 SGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVT 351
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L+ G+C++ + + +L+E +N P+V T+S + C+KG V EA ++ M
Sbjct: 352 YSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMI 411
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ + VT+N L+ G +++E K+ + M KGC P+ SY ++ G +R
Sbjct: 412 ERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERID 471
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EAK+L M + ++P+ +++ LI GLC + KKM G P +
Sbjct: 472 EAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDL 524
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 3/251 (1%)
Query: 124 RFSDGFFYNVI---KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
R D F N K G A+ M N +P + FN +L LV K Y
Sbjct: 62 RHKDASFDNFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYD 121
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ IY GV L IL+ LC + F VL + K +P++ T++TL+
Sbjct: 122 SVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLI 181
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
+GLC +G + EA L+ + S G T ++++GL K GK + +++M C
Sbjct: 182 NGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCE 241
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P SY ++ L + EA +L M +SP+ V+Y LI+G+CN + +
Sbjct: 242 PEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASIL 301
Query: 361 LKKMVQQGFVP 371
K+M++ P
Sbjct: 302 FKEMLEWNMKP 312
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 1/222 (0%)
Query: 136 IYGNMAGRISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
I+G + K TL +M S N P V TF++ +++ + E Q I + G+
Sbjct: 356 IHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGL 415
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ N L+ G C + ++ A V D + C P+V +Y+ L+ G C+ ++EA
Sbjct: 416 RPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQ 475
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L + M +G+ +++T LISGL + G+ +L ++M GC P+ +Y +L G
Sbjct: 476 LFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFC 535
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
EA L + ++ P+ V K L+ G+C +ED
Sbjct: 536 KHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLED 577
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
SV T +++N L L G + KLG + N L+ GLC G + A L
Sbjct: 138 SVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQL 197
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
D + +P V T++ +++GLC+ G A +++M + + V+++I+I L K
Sbjct: 198 DYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKN 257
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
V E + L M+ G P +Y ++YG+ + ++ +A L M+ M P V++
Sbjct: 258 RLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTF 317
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ LC + +V + V KM+Q P + + ++
Sbjct: 318 SILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLI 356
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 124/265 (46%), Gaps = 16/265 (6%)
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
I V+ LC+ +G + ++G M I A+E P + T++ +++ + +
Sbjct: 319 ILVDALCK--EGVVLEALSVFGKM---IQIAME-----------PDIVTYSSLIHGVCKS 362
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
L+ E + + D +I + C+ G + A +++ ++ PNV TY
Sbjct: 363 SLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTY 422
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
++LM G C ++EA + + M ++G D +++NILI G K +++E +L + M
Sbjct: 423 NSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSH 482
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
KG PNS ++ ++ GL R AKEL +M P ++Y L+ G C +++
Sbjct: 483 KGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDE 542
Query: 357 VDWVLKKMVQQGFVPRMGMWREIVG 381
+ + + + P + + ++G
Sbjct: 543 ALALFEALKKSQLKPNHVICKILLG 567
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 148/328 (45%), Gaps = 16/328 (4%)
Query: 76 SVLNQYSKRKDYNPNEALYTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
SV++ Y K + + + ++YTL +IN L ++ +I F GF ++
Sbjct: 122 SVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKI-------FKLGFKPSI 174
Query: 134 IK----IYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
I I G + GRI +A+E L + S P+V T +++N L
Sbjct: 175 ITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKK 234
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+L E + +I++ LC+N + A + P V TY++L++G+C G
Sbjct: 235 MVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQ 294
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
++A L + M + D VTF+IL+ L K+G V E + + +M P+ +Y
Sbjct: 295 WKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSS 354
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+++G+ + E+ L+ M+ + P V++ + C + +V + ++ M+++G
Sbjct: 355 LIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERG 414
Query: 369 FVPRMGMWREIVG--CVTFGKDNRNRVY 394
P + + ++ C+ D +V+
Sbjct: 415 LRPNVVTYNSLMDGYCLHSQMDEARKVF 442
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +S+A + M P+V T+N +++ E + ++ G D
Sbjct: 398 GMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSY 457
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+KG C++ ++ A + DE + PN T++TL+ GLC+ G A L ++M S
Sbjct: 458 NILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGS 517
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D +T++ L+SG K G ++E + L E +K PN + +L G+ + +
Sbjct: 518 HGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLED 577
Query: 322 AKELVGRMICERMSP 336
AKEL + E + P
Sbjct: 578 AKELFSSLSIEELQP 592
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 151 LFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+FD M + C P V ++N+++ ++ E + ++ + G+ ++ L+ GLC
Sbjct: 441 VFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLC 500
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G AA + + C P++ TYSTL+ G C+ G+++EA L E ++ + + V
Sbjct: 501 QAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHV 560
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
IL+ G+ K GK+E+ +L + + P+
Sbjct: 561 ICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 5/194 (2%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-I 134
S++N +R PN Y +++ + D + I V K C D YN+ I
Sbjct: 405 SIINLMIER-GLRPNVVTYNSLMDGYCLHSQMDEARKVFD-IMVNKGCA-PDVLSYNILI 461
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
K Y + RI +A + +M P+ T +++ L A + ++ G
Sbjct: 462 KGYCK-SERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGC 520
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D + LL G C++G+L+ A + + K +PN L+ G+C+ G +E+A
Sbjct: 521 PPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKE 580
Query: 255 LLERMESEGIDADT 268
L + E + D
Sbjct: 581 LFSSLSIEELQPDV 594
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 114/220 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ T + +LN K + + ++G D L+ GL + A +
Sbjct: 77 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 136
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+D ++ C+PN+ TY +++GLC++G+++ AF LL +ME+ I+AD V FN +I L K
Sbjct: 137 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 196
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
V++ + L + M+ KG PN +Y ++ L R+ +A +L+ MI ++++P+ V+
Sbjct: 197 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 256
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ LI + + + + M+++ P + + ++
Sbjct: 257 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 296
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 126/274 (45%), Gaps = 35/274 (12%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR S A + L DM P++ TFN +++ V + E + ++ K ++ D
Sbjct: 233 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 292
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C + L+ A + + ++C P++ TY+TL+ G C+ VE+ L M
Sbjct: 293 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 352
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ DTVT+ LI GL G + K+ ++M G P+ +Y +L GL + + +
Sbjct: 353 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 412
Query: 322 AKELVGRM------------------ICER-----------------MSPSFVSYKKLIH 346
A E+ M +C+ + P+ V+Y +I
Sbjct: 413 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 472
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
GLC+++L+++ +LKKM + G +P G + ++
Sbjct: 473 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 506
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 20/293 (6%)
Query: 87 YNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG--- 142
Y P+ + ++N KR DA+ + Q +++ G+ + I + G
Sbjct: 75 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM--------GYRPDTITFTTLIHGLFL 126
Query: 143 --RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEID 197
+ S+A+ + M C P++ T+ +V+N L G+I + K+ +E D
Sbjct: 127 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR---GDIDLAFNLLNKMEAAKIEAD 183
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N ++ LC+ +++ A + E + PNV TYS+L+ LC G +A LL
Sbjct: 184 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 243
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M + I+ + VTFN LI K+GK E KL + M + P+ +Y ++ G
Sbjct: 244 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 303
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
R +AK++ M+ + P +Y LI G C K VED + ++M +G V
Sbjct: 304 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 356
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 8/266 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRF---DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K NPN + +I+ + +F + + D M + ++ D F YN + M
Sbjct: 248 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID-----PDIFTYNSLINGFCMH 302
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ KA + M S +C+P + T+N ++ +K + ++ + G+ D
Sbjct: 303 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 362
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L++GL +G+ + A V + P++ TYS L+ GLC G +E+A + + M+
Sbjct: 363 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 422
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
I D + +I G+ K GKV++G L + KG PN +Y ++ GL K+ E
Sbjct: 423 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 482
Query: 322 AKELVGRMICERMSPSFVSYKKLIHG 347
A L+ +M + P +Y LI
Sbjct: 483 AYALLKKMKEDGPLPDSGTYNTLIRA 508
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 143/297 (48%), Gaps = 10/297 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-----R 143
P+ + +++ +A+ K+FD + + K+ KL G+ +++ + + G R
Sbjct: 40 PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKL-----GYEPSIVTLSSLLNGYCHGKR 94
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
IS A+ + M P TF +++ L E + + G + + +
Sbjct: 95 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 154
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ GLC+ G+++ AF +L++ E +V ++T++ LC+ +V++A L + ME++G
Sbjct: 155 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 214
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I + VT++ LIS L G+ + +LL M K PN ++ ++ + + +F EA+
Sbjct: 215 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 274
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+L MI + P +Y LI+G C ++ + + MV + P + + ++
Sbjct: 275 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 331
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 136/282 (48%), Gaps = 6/282 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++N L + D +++ +++ K+ +D +N I + A+
Sbjct: 147 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI--EADVVIFNTIIDSLCKYRHVDDAL 204
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M + P+V T++ +++ L S + + + + + + + N L+
Sbjct: 205 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 264
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G A + D+ K++ +P++ TY++L++G C +++A + E M S+ D
Sbjct: 265 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 324
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N LI G K +VE+G +L M +G ++ +Y ++ GL A+++ +
Sbjct: 325 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 384
Query: 329 MICERMSPSFVSYKKLIHGLCN----QKLVEDVDWVLKKMVQ 366
M+ + + P ++Y L+ GLCN +K +E D++ K ++
Sbjct: 385 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 426
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 91/176 (51%), Gaps = 1/176 (0%)
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+L + +L + K EP++ T S+L++G C + +A L+++M G DT+TF
Sbjct: 59 DLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 118
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
LI GL K E + L++RM +GC PN +Y V+ GL + A L+ +M
Sbjct: 119 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 178
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV-TFGK 387
++ V + +I LC + V+D + K+M +G P + + ++ C+ ++G+
Sbjct: 179 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 234
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ +T +I+ L + ++ R+ V++ C+ + Y V+ G I
Sbjct: 110 YRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQ-PNLVTYGVVVNGLCKRGDIDL 167
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M + V FN +++ L + + ++ G+ + + L+
Sbjct: 168 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 227
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC G A +L + ++ PN+ T++ L+ ++G EA L + M ID
Sbjct: 228 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 287
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T+N LI+G ++++ ++ E M K C+P+ +Y ++ G KR + EL
Sbjct: 288 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 347
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + V+Y LI GL + ++ V K+MV G P
Sbjct: 348 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 392
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 63/145 (43%), Gaps = 1/145 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA+E M + + ++ + A + ++ S + GV+ +
Sbjct: 408 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 467
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ GLC L+ A+ +L + + P+ TY+TL+ G+ + L+ M S
Sbjct: 468 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 527
Query: 262 EGIDADTVTFNILISGLRKQGKVEE 286
D T L++ + G++++
Sbjct: 528 CRFVGDASTIG-LVANMLHDGRLDK 551
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 154/307 (50%), Gaps = 11/307 (3%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
LR+ + V++++ ++ PN ++ I L + + + ++R++V + D
Sbjct: 247 LRNALRVLTLM----QKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGI--KPD 300
Query: 128 GFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
YN +IK Y ++ RI A+E + +PS C P ++ V+ L K +++ +
Sbjct: 301 IVTYNSLIKGYCDL-NRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLM 359
Query: 187 TSAAKLGVEI-DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ I D N L+ L ++G+ + A L E + + YS ++H C+
Sbjct: 360 EKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQ 419
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
KG ++EA L+ M S + D VT+ ++ G + G+++E K+L++M GC PN+ S
Sbjct: 420 KGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVS 479
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKM 364
Y +L GL + EA+E++ +P+ ++Y ++HG + KL E D + ++M
Sbjct: 480 YTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACD-LTREM 538
Query: 365 VQQGFVP 371
V++GF P
Sbjct: 539 VEKGFFP 545
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 132/315 (41%), Gaps = 39/315 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGRISKA 147
P++ Y +I+ L++ D D + +K + F D Y+ I GR+ +A
Sbjct: 370 PDQVTYNTLIHMLSKHGHAD---DALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEA 426
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ DM S +C P V T+ +++ E + + K G + + LL G
Sbjct: 427 KSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNG 486
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC +G A +++ + PN TY +MHG +G + EA L M +G
Sbjct: 487 LCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPT 546
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGC---------------------------- 299
V N+LI L + KV E K LE KGC
Sbjct: 547 PVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLE 606
Query: 300 -------YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+P++ +Y + L K R EA EL+ +M+ + + P+ V+++ +IH C
Sbjct: 607 DMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWG 666
Query: 353 LVEDVDWVLKKMVQQ 367
V+D+ +L +MV++
Sbjct: 667 RVDDMLNLLDRMVKR 681
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 139/295 (47%), Gaps = 16/295 (5%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
V++ YS+ NP+ YT I++ + R D + ++Q++ + G N +
Sbjct: 430 VIDMYSR--SCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQM-------YKHGCKPNTVSY 480
Query: 137 YGNMAG--RISKAIET--LFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ G K++E + ++ + W P+ T+ +V++ E + +
Sbjct: 481 TALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVE 540
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G +N+L++ LC+N + A L+E + C NV ++T++HG C+ G++E
Sbjct: 541 KGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEA 600
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A +LE M D VT+ L L K+G+++E +L+ +M KG P +++ V++
Sbjct: 601 ALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIH 660
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
R + L+ RM+ + P Y +I LC+ +E+ + +L K+++
Sbjct: 661 RYCQWGRVDDMLNLLDRMV--KRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLR 713
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 1/202 (0%)
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
+L++L KL + + + G+E+ ++ G L A VL K
Sbjct: 202 LLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAG 261
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
EPN+ +T ++ L + +E+A LERM+ GI D VT+N LI G ++E+ +
Sbjct: 262 VEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDAL 321
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE-RMSPSFVSYKKLIHG 347
+L+ + KGC P+ SY V+ L +K+ + K L+ +M+ + + P V+Y LIH
Sbjct: 322 ELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHM 381
Query: 348 LCNQKLVEDVDWVLKKMVQQGF 369
L +D LK+ +GF
Sbjct: 382 LSKHGHADDALAFLKEAEDKGF 403
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 2/164 (1%)
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
FY D + + P V Y TL+ L + + A +L M GI+ F ++
Sbjct: 183 FYWADRQWRYSHHPLV--YYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVS 240
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
+ GK+ +++L M+ G PN + +Y L+ + +A + RM + P
Sbjct: 241 YSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPD 300
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
V+Y LI G C+ +ED ++ + +G P + ++G
Sbjct: 301 IVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMG 344
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 100/246 (40%), Gaps = 4/246 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P L+I L Q ++ + ++ + K C + F VI + + G +
Sbjct: 541 KGFFPTPVEINLLIQSLCQNQKVVEAKKYLEEC-LNKGCAINVVNFTTVIHGFCQI-GDM 598
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+ L DM N P T+ + + L E + G++ +
Sbjct: 599 EAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSV 658
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ C+ G ++ +LD K+ +P Y+ ++ LC+ GN+EEA LL ++
Sbjct: 659 IHRYCQWGRVDDMLNLLDRMVKR--KPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTAS 716
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D T ++L+ K+G K+ +M + P+ ++V L+ EA +
Sbjct: 717 KLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADK 776
Query: 325 LVGRMI 330
L+ R +
Sbjct: 777 LMLRFV 782
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 85 SGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 144
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K++ L + M KG PN ++ ++ G R
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + + P ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 324
Query: 381 -GCVTFG 386
GC G
Sbjct: 325 DGCCKEG 331
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 133/255 (52%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 143 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 199
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 319
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 366 QQGFVPRMGMWREIV 380
G P G + IV
Sbjct: 380 SVGLKPDTGTYTMIV 394
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 109/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L G++ G+ + L+ G C+NG ++ A +
Sbjct: 210 PDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D T+ LI G K
Sbjct: 270 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 329
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGT 389
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +++ C + V +LK+M + G P
Sbjct: 390 YTMIVNEFCKKGDVWKGSKLLKEMQRDGHAP 420
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D + + V+ L +G + + GR+ A
Sbjct: 209 QPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLV--PNGVTFTTLIDGHCKNGRVDLA 266
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 267 MEIYKQMLSQSLLPDLITYN-----------------------------------TLIYG 291
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ A ++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 292 LCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 351
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G P++ +Y ++ K + +L+
Sbjct: 352 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLK 411
Query: 328 RMICERMSPSFVSYKKLIHG 347
M + +PS V+Y L++G
Sbjct: 412 EMQRDGHAPSVVTYNVLMNG 431
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A++ L M C P V +N V++ L + E ++ G+ +
Sbjct: 190 GHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTY 249
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ +L G C G L A + + +N PN T++ L+ GLC++G + EA + E M
Sbjct: 250 SSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTE 309
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G++ D T++ L+ G Q +++E KL + M GKG P+ Y ++ G +R E
Sbjct: 310 NGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNE 369
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
AK L+ M ++P V+Y L+ G C + + K+M G +P
Sbjct: 370 AKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLP 419
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 4/230 (1%)
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK---LGVEIDACCL 201
S I M N P+V T +++N L + + +++ K LG++
Sbjct: 86 STVISLCKQMDLSNIRPNVYTLTILINCLCHSN-RDHVHFAFSALGKMFKLGLQPTHVTF 144
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
LL GLC + A + DE K P++ TY+T++ GLC+ G+ A LL++ME
Sbjct: 145 GTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEE 204
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G D V +N +I L K + E M M +G PN +Y +L+G + + E
Sbjct: 205 KGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNE 264
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A L +MI + P+ V++ L+ GLC + ++ + V + M + G P
Sbjct: 265 ATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEP 314
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 130/291 (44%), Gaps = 35/291 (12%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC-- 199
G++++A M N P+ TF ++++ L + E + ++ + GVE DA
Sbjct: 260 GQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTY 319
Query: 200 -------CL--------------------------NILLKGLCENGNLEAAFYVLDEFPK 226
CL NIL+ G C++ L A +L E
Sbjct: 320 SALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYD 379
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
++ P+ TYSTLM G C+ G + A L + M S G+ D++T++IL+ GL K G ++E
Sbjct: 380 RDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDE 439
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+LL+ M+ P+ Y ++ G+ + + A+EL + + + PS V+Y +I
Sbjct: 440 AFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMIS 499
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTE 397
GL + L + + +KMV G +P + + D N V + E
Sbjct: 500 GLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIE 550
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 149/318 (46%), Gaps = 17/318 (5%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLA------QAKRFDAIED 112
+ +L F NL S+ Q R + PN +T++++ L +A+R + +
Sbjct: 250 SSILHGFCNLGQLNEATSLFKQMIGR-NVMPNTVTFTILVDGLCKEGMILEARR---VFE 305
Query: 113 IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLN 171
+M VE D + Y+ + + ++ +A + LFD M PSV+ +N+++N
Sbjct: 306 MMTENGVEP-----DAYTYSALMDGYCLQSQMDEA-QKLFDIMVGKGFAPSVRVYNILIN 359
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
++ E + + + + D + L++G C+ G + A + E P
Sbjct: 360 GHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLP 419
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+ TYS L+ GLC+ G+++EAF LL+ M+ I+ +NILI G+ GK+E +L
Sbjct: 420 DSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELF 479
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ KG P+ +Y ++ GLL + EA E+ +M+ P+ +Y I G
Sbjct: 480 SNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRN 539
Query: 352 KLVEDVDWVLKKMVQQGF 369
+ ++++MV +GF
Sbjct: 540 GDPSNAVRLIEEMVGRGF 557
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 157/357 (43%), Gaps = 10/357 (2%)
Query: 39 SHQDSDHHAYKLNHKDW---LSPTEVL--KIFSNLRDPISVISVLNQYSK--RKDYNPNE 91
S++D H A+ K + L PT V + + L +I + + + + + P+
Sbjct: 117 SNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSL 176
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
YT II L + ++++++ EK C+ D YN + R ++A+
Sbjct: 177 ITYTTIIKGLCKIGHTTNALQLLKKME-EKGCK-PDVVAYNTVIDSLCKDRRANEAMYFF 234
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+M P+V T++ +L+ + E ++ V + IL+ GLC+
Sbjct: 235 SEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKE 294
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G + A V + + EP+ TYS LM G C + ++EA L + M +G +
Sbjct: 295 GMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVY 354
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
NILI+G K ++ E LL M + P++ +Y ++ G R A++L M
Sbjct: 355 NILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCS 414
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
+ P ++Y L+ GLC +++ +LK M + P + ++ ++ G FGK
Sbjct: 415 YGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGK 471
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+++A L +M + P T++ ++ A Q ++ G+ D+ +
Sbjct: 366 RLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYS 425
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
ILL GLC++G+L+ AF +L + EP++ Y+ L+ G+C G +E A L + +
Sbjct: 426 ILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVK 485
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI VT+ ++ISGL K+G E ++ +M GC PNS +Y + G L A
Sbjct: 486 GIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNA 545
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
L+ M+ S +++ L+ N +++
Sbjct: 546 VRLIEEMVGRGFSADSSTFQMLLDLESNDEII 577
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 122/247 (49%), Gaps = 9/247 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMA 141
+R + N Y +IN L+ A R +MQ + D YN I I+G +
Sbjct: 116 ERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT-----PDTQTYNAI-IHGFCKS 169
Query: 142 GRISKAIETLFDMPS-YNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G I +A L +M C P T+++++N L S+ L + + +
Sbjct: 170 GEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVV 229
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ G C+ +L+ A +L + C P+V TYST++ GLC G+V++ F LLE+M
Sbjct: 230 AFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKM 289
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S G D VT+ +L++GL K GK+ E +L++RM GC PN+ +Y V GL +
Sbjct: 290 VSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKL 349
Query: 320 PEAKELV 326
A +L+
Sbjct: 350 DMANDLL 356
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 158/332 (47%), Gaps = 36/332 (10%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ + +L + ++ P ++Y ++ L ++ + ++++ +K + C+ D +N
Sbjct: 36 AAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMK-DGACK-PDVVTFN 93
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE----IQGIYTS 188
+ AGR+ +A + L +M ++ T+N ++N L SA GE +QG+ T+
Sbjct: 94 TLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT 153
Query: 189 A-----------------------------AKLGVEIDACCLNILLKGLCENGNLEAAFY 219
+ G D +IL+ GLC++ NL A
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADE 213
Query: 220 VLDEF-PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+L E +++C +V ++TL+ G C+ +++ A LL M G D VT++ +I GL
Sbjct: 214 LLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGL 273
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
+ G V++G LLE+M +GC P+ +Y ++ GL + EA LV RM+ + +P+
Sbjct: 274 CRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNA 333
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
V+Y + GLC ++ + +L + +G V
Sbjct: 334 VTYSLVFDGLCKIDKLDMANDLLTSIRDKGRV 365
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 119/241 (49%), Gaps = 6/241 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y II+ ++ D ++ +K C D F Y+++ + + KA
Sbjct: 153 TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCS-PDTFTYSILINGLCKSSNLRKA 211
Query: 148 IETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E L +M +C SV FN +++ A+ + + +S + G D + ++
Sbjct: 212 DELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIID 271
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC G+++ F +L++ + C+P+V TY+ L+ GLC+ G + EA L++RM +G
Sbjct: 272 GLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTP 331
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG----LLDKKRFPEA 322
+ VT++++ GL K K++ LL ++ KG + +++ +L LLD+ F +
Sbjct: 332 NAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKKRLLDRAAFQKW 391
Query: 323 K 323
K
Sbjct: 392 K 392
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+L++ C G L+AA +L E +Q P Y+ +H LC+ G V EA +++ M+
Sbjct: 23 VLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKD 82
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
D VTFN LI+GL K G+++E ++L+ M+ G N +Y ++ GL R E
Sbjct: 83 GACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGE 142
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A ++ M +P +Y +IHG C ++ L++M Q+
Sbjct: 143 AVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRA 186
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGK-GCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D T+ +L+ G+++ M LL M+ + G P + Y ++ L + PEA E+
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V M P V++ LI GLC +++ VL +M + GF + + ++
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLI 131
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 122/247 (49%), Gaps = 9/247 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMA 141
+R + N Y +IN L+ A R +MQ + D YN I I+G +
Sbjct: 116 ERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT-----PDTQTYNAI-IHGFCKS 169
Query: 142 GRISKAIETLFDMPS-YNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G I +A L +M C P T+++++N L S+ L + + +
Sbjct: 170 GEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVV 229
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L+ G C+ +L+ A +L + C P+V TYST++ GLC G+V++ F LLE+M
Sbjct: 230 AFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKM 289
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S G D VT+ +L++GL K GK+ E +L++RM GC PN+ +Y V GL +
Sbjct: 290 VSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKL 349
Query: 320 PEAKELV 326
A +L+
Sbjct: 350 DMANDLL 356
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 149/305 (48%), Gaps = 15/305 (4%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ + +L + ++ P ++Y ++ L ++ + ++++ +K + C+ D +N
Sbjct: 36 AAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMK-DGACK-PDVVTFN 93
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE----IQGIYTS 188
+ AGR+ +A + L +M ++ T+N ++N L SA GE +QG+ T+
Sbjct: 94 TLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT 153
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKG 247
D N ++ G C++G ++ A+ L+E ++ C P+ TYS L++GLC+
Sbjct: 154 P-------DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSS 206
Query: 248 NVEEAFGLLERM-ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
N+ +A LL+ M + A V FN L+ G K ++ +LL M GC P+ +Y
Sbjct: 207 NLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTY 266
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL + L+ +M+ P V+Y L+ GLC + + ++K+M++
Sbjct: 267 STIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLE 326
Query: 367 QGFVP 371
G P
Sbjct: 327 DGCTP 331
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 119/241 (49%), Gaps = 6/241 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y II+ ++ D ++ +K C D F Y+++ + + KA
Sbjct: 153 TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCS-PDTFTYSILINGLCKSSNLRKA 211
Query: 148 IETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E L +M +C SV FN +++ A+ + + +S + G D + ++
Sbjct: 212 DELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIID 271
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC G+++ F +L++ + C+P+V TY+ L+ GLC+ G + EA L++RM +G
Sbjct: 272 GLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTP 331
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG----LLDKKRFPEA 322
+ VT++++ GL K K++ LL ++ KG + +++ +L LLD+ F +
Sbjct: 332 NAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSVKKRLLDRAAFQKW 391
Query: 323 K 323
K
Sbjct: 392 K 392
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+L++ C G L+AA +L E +Q P Y+ +H LC+ G V EA +++ M+
Sbjct: 23 VLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKD 82
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
D VTFN LI+GL K G+++E ++L+ M+ G N +Y ++ GL R E
Sbjct: 83 GACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGE 142
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A ++ M +P +Y +IHG C ++ L++M Q+
Sbjct: 143 AVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRA 186
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGK-GCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D T+ +L+ G+++ M LL M+ + G P + Y ++ L + PEA E+
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V M P V++ LI GLC +++ VL +M + GF + + ++
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLI 131
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 162/336 (48%), Gaps = 27/336 (8%)
Query: 45 HHAYKLNHKDWLSPTEVLK------IFSNLRDPISVISVLNQYSKRKDYNP-NEALYTLI 97
H+ ++ N + S +EVL + +RD + + S+ + P N Y+ +
Sbjct: 41 HNQWEENLQTRFSESEVLASDVAHLVLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSL 100
Query: 98 INKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL-FDMPS 156
+ LA+++ F +E +++ ++VE++ + VI+ Y + +G + KA+E F + +
Sbjct: 101 LKLLARSRVFSEMEVVLENMRVEEMSPTREAMSI-VIQAYSD-SGLVEKALELYYFVLKT 158
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG-VEIDACCLNILLKGLCENGNLE 215
Y +P V N +LN+LV KLG +EI I++KGLC+ G LE
Sbjct: 159 YTYFPDVIACNSLLNMLV----------------KLGRIEIARKFTCIMVKGLCKEGKLE 202
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
++++ Q C PN+ Y+TL+ G C+KG++E A GL ++ +G T+ +I
Sbjct: 203 EGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAII 262
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+G K+G + +LL M +G N Y ++ +A E + MI
Sbjct: 263 NGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCK 322
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P V+Y LI G C V + D +L++ + +G +P
Sbjct: 323 PDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMP 358
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 2/289 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K + P Y IIN + F AI+ ++ + L + YN I G
Sbjct: 247 KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLT--VNVQVYNTIIDARYKHG 304
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
I KA+ET+ M C P + T+N +++ E + A G+ +
Sbjct: 305 HIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYT 364
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ C+ G + A L E ++ +P++ TY L+HGL G V+ A + E+M
Sbjct: 365 PLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLER 424
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D +NIL+SGL K+ K+ LL M + P++ Y ++ G + EA
Sbjct: 425 GVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEA 484
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++L I + M+P V Y +I G C +++D + +M ++ P
Sbjct: 485 RKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAP 533
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/376 (19%), Positives = 148/376 (39%), Gaps = 60/376 (15%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
VLK ++ D I+ S+LN K +++ L + + + +++
Sbjct: 155 VLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIED---- 210
Query: 121 KLCRFSDG-----FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
R+ G FYN + G + A ++ P+V+T+ ++N
Sbjct: 211 ---RWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCK 267
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ I + G+ ++ N ++ ++G++ A ++ + C+P++ T
Sbjct: 268 KGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVT 327
Query: 236 YSTLMHGLCEKGNVEEAFGLLER-----------------------------------ME 260
Y+TL+ G C G V EA LLE+ M
Sbjct: 328 YNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMT 387
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G D VT+ L+ GL G+V+ + + E+M +G +P++ Y ++ GL K + P
Sbjct: 388 ERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLP 447
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP--------- 371
AK L+ M+ + + P Y L+ G +++ + + +++G P
Sbjct: 448 AAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMI 507
Query: 372 ----RMGMWREIVGCV 383
+ GM ++ + C+
Sbjct: 508 KGYCKFGMMKDAMACI 523
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDA 198
G +A L +M P + T+ +++ LV A GE+ T K+ GV DA
Sbjct: 374 GGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVA---GEVDVALTIREKMLERGVFPDA 430
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
NIL+ GLC+ L AA +L E Q+ P+ Y+TL+ G GN++EA L E
Sbjct: 431 GIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFEL 490
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
+G++ V +N +I G K G +++ M + RMK + P+ +Y V+ G + +
Sbjct: 491 TIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHD 550
Query: 319 FPEAKELVGRMICERMSPSFV 339
A+++ M+ + P+ +
Sbjct: 551 LDGAQKMFREMVKMKCKPNVM 571
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 133/293 (45%), Gaps = 4/293 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGRISKA 147
P+ Y +I L++ D +I+Q + EKL RF D Y+ I G+I KA
Sbjct: 420 PDHVTYNSLIQMLSKHGHGDEALEILQ--EAEKL-RFKVDKVEYSAIVHAYCKEGKIQKA 476
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E + +M S C P V T+ VL+ + + + K + +A L G
Sbjct: 477 KELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNG 536
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC NG A +++ ++ PN TYS ++HGL +G + EA ++ M +G +
Sbjct: 537 LCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPN 596
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V N+L+ L + GK E +LL+ KGC N ++ V++G K A L+
Sbjct: 597 PVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 656
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M P V+Y LI L +E+ + KM++QG VP +R ++
Sbjct: 657 DMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVI 709
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 161/308 (52%), Gaps = 13/308 (4%)
Query: 68 LRDPISVISVLNQYSKRKDYN-PNEALYTLII-NKLAQAKRFDAIEDIMQRIKVEKLCRF 125
LRD + V++++ + + + N A++ L++ N+L +A RF + M I +
Sbjct: 297 LRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRF---AERMVLIGIA----- 348
Query: 126 SDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
+ YN +IK Y N+ ++ +A+E + MPS C P ++ V+ LL K EI+
Sbjct: 349 PNVVTYNCLIKGYCNVH-QVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRE 407
Query: 185 -IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
I + D N L++ L ++G+ + A +L E K + + YS ++H
Sbjct: 408 LIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAY 467
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C++G +++A L+ M S+G D D VT+ ++ G + GK+++ K++++M C PN+
Sbjct: 468 CKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNA 527
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y L GL + EA++++ E +P+ ++Y ++HGL + + + V+++
Sbjct: 528 VTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVRE 587
Query: 364 MVQQGFVP 371
M+ +GF P
Sbjct: 588 MIGKGFFP 595
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G L A VL K EPN+ +T +H L +++A ERM GI + VT+
Sbjct: 295 GRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTY 354
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N LI G +V++ M+L+++M KGC P+ SY V+ L KR E +EL+ +M
Sbjct: 355 NCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQT 414
Query: 332 E-RMSPSFVSYKKLIHGL 348
+ ++ P V+Y LI L
Sbjct: 415 DSKLLPDHVTYNSLIQML 432
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 19/258 (7%)
Query: 46 HAYKLNHKDWLSPTEVLKIFSNLRDP--ISVISVLNQYSK---------------RKDYN 88
HAY K + V ++FS DP ++ SVL+ + + +
Sbjct: 465 HAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCK 524
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN YT +N L + + +M + E + Y+V+ G++++A
Sbjct: 525 PNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWT--PNAITYSVVVHGLRREGKLNEAC 582
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + +M +P+ NL+++ L E + G ++ ++ G
Sbjct: 583 DVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGF 642
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ +LEAA +LD+ N P+ TY+ L+ L + +EEA L +M +G+
Sbjct: 643 CQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSP 702
Query: 269 VTFNILISGLRKQGKVEE 286
VT+ +I ++G+VE+
Sbjct: 703 VTYRSVIHQYCRKGRVED 720
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%)
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G + +A +L M+ G++ + N I L ++++ ++ ERM G PN +Y
Sbjct: 295 GRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTY 354
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ G + + +A EL+ +M + SP VSY ++ LC K + ++ ++KKM
Sbjct: 355 NCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKM 412
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%)
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
F ++ + G++ + MK+L M+ G PN + ++ L+ +A RM
Sbjct: 283 AFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERM 342
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ ++P+ V+Y LI G CN V+ ++ +M +G P + ++G
Sbjct: 343 VLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMG 394
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 132/273 (48%), Gaps = 3/273 (1%)
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLV 169
+E+I+Q++K E + F NVI YG A +A + +PS+ C +VK+ N +
Sbjct: 1 MEEILQQLKQETRFAPHEVIFCNVIAFYGR-AHLPDRAFQVFERIPSFRCKRTVKSVNSL 59
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
L L+ + ++ ++ + G DAC NIL+ C G+L+A + V DE K+
Sbjct: 60 LAALLKNRQLEKMTQVFVDISNYGSP-DACTFNILIHAACLCGDLDAVWGVFDEMQKRGV 118
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFNILISGLRKQGKVEEGM 288
+PNV T+ TL++GL ++EA L E M + I + + LI G G++
Sbjct: 119 KPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAF 178
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
KL E M SA Y ++ L R E +++ M P V+Y +I+G
Sbjct: 179 KLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGH 238
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
C + +E V+ +MV++G P + + I+G
Sbjct: 239 CKENDLESAHRVMDEMVEKGCKPDVFSFNTIIG 271
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF-NLVLNLLVSAKLYGEIQGI 185
D +N++ + G + +M P+V TF L+ L +++KL ++
Sbjct: 86 DACTFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLK 145
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
++ +A L+KG C G L AF + +E N + YSTL+ L +
Sbjct: 146 EDMVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFK 205
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G EE +L M G DTVT+N +I+G K+ +E ++++ M KGC P+ S
Sbjct: 206 HGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFS 265
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+ ++ L + + +A +L+ M P +SY+ + GLC +++ +L +M+
Sbjct: 266 FNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMI 325
Query: 366 QQGFVPR 372
+G+VPR
Sbjct: 326 FKGYVPR 332
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 97/180 (53%), Gaps = 1/180 (0%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ L ++G E +L E + C+P+ TY+ +++G C++ ++E A +++ M +G
Sbjct: 199 LISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKG 258
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D +FN +I L K+GK+++ M LLE M +GC P+ SY+ + GL + + EA
Sbjct: 259 CKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEAT 318
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
++ MI + P S KL+ LC Q+ ++ W++ + +G M MW +V V
Sbjct: 319 SILDEMIFKGYVPRNESINKLVDRLC-QECNMELLWMILNSLGRGNRMNMDMWARVVAFV 377
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 86/153 (56%), Gaps = 4/153 (2%)
Query: 162 SVKTFNLVLNLLVSAKL-YG---EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
+VK + V + L+SA +G E+ I + G + D N ++ G C+ +LE+A
Sbjct: 188 NVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESA 247
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
V+DE ++ C+P+V +++T++ LC++G +++A LLE M G D +++ I+ G
Sbjct: 248 HRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDG 307
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
L + +++E +L+ M KG P + S +++
Sbjct: 308 LCEMMQLKEATSILDEMIFKGYVPRNESINKLV 340
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 2/189 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR + + L +M C P T+N ++N + + G + D
Sbjct: 207 GRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSF 266
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ LC+ G L+ A +L++ P++ C P+V +Y + GLCE ++EA +L+ M
Sbjct: 267 NTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIF 326
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G + N L+ L ++ +E +L + G+G N + V+ + K+ E
Sbjct: 327 KGYVPRNESINKLVDRLCQECNMELLWMILNSL-GRGNRMNMDMWARVV-AFVYKENLSE 384
Query: 322 AKELVGRMI 330
+ L+ +I
Sbjct: 385 SSNLIDSLI 393
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A++T + M PSV T N+VL LV + + G+ D NI
Sbjct: 121 VGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNI 180
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL LCE G + A ++L + + P TY+TL++ C+KG + A L++ M S+G
Sbjct: 181 LLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKG 240
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D T+N+ I L + + +G LL+RM+ YPN +Y ++ G + + + A
Sbjct: 241 IGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVAT 300
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ M + P+ ++Y LI G C + + ++ MV G P
Sbjct: 301 KVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRP 348
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 133/306 (43%), Gaps = 3/306 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ NP+ +++ L + ++ D + + + +C D +N++ G+
Sbjct: 134 RGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGIC--PDVATFNILLNALCERGKF 191
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A L M +P+ T+N +LN Y + A G+ +D C N+
Sbjct: 192 KNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVF 251
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ LC + + +L + PN TY+TL+ G +G +E A + + M +
Sbjct: 252 IDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNL 311
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+++T+N LI+G G + E ++L++ M G PN +Y +L GL F
Sbjct: 312 LPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSS 371
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCV 383
++ RM + S +SY +I GLC ++E+ +L M++ P + + ++ G
Sbjct: 372 ILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFF 431
Query: 384 TFGKDN 389
GK N
Sbjct: 432 RVGKIN 437
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 37/258 (14%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R + P++ + +I Q+K FD I++ I +E D F +N++
Sbjct: 764 RHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEG--HVIDRFTFNMLITKFCERNE 821
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY------------------------ 179
+ KA E + M + P+V T+N + N L+ +
Sbjct: 822 MKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYIT 881
Query: 180 --------GEIQG---IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
G I+G + LG+ ++ +++GL + +E A +VLD +
Sbjct: 882 LINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQ 941
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
P V T++TLMH C++ NV +A L ME + D V +N+LISGL G +E
Sbjct: 942 IIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAF 1001
Query: 289 KLLERMKGKGCYPNSASY 306
KL E MK + +PN++ Y
Sbjct: 1002 KLYEEMKQRDLWPNTSIY 1019
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 120/302 (39%), Gaps = 37/302 (12%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+R PNE Y +I+ + + + + + + L + YN + G
Sbjct: 272 RRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNL--LPNSITYNTLIAGHCTTG 329
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
I +A+ + M S+ P+ T+ +LN L +G + I GV +
Sbjct: 330 NIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYT 389
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT--------------------------- 235
++ GLC+NG LE A +LD+ K + P+V T
Sbjct: 390 AMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKT 449
Query: 236 --------YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
YSTL++ C+ G ++EA M G AD T N+L++ + GK+EE
Sbjct: 450 GLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEA 509
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+ M G PNS ++ ++ G + +A + +M PS +Y L+ G
Sbjct: 510 EYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKG 569
Query: 348 LC 349
LC
Sbjct: 570 LC 571
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 109/249 (43%), Gaps = 2/249 (0%)
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+I YGN +G KA M S+ +PS+ T+ +L L E + +
Sbjct: 531 IINGYGN-SGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCI 589
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
+D N L C +GNL A +++E + P+ TY+ L+ GLC+KG + A
Sbjct: 590 PNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAA 649
Query: 253 FGLLERMESEGI-DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
L + +G+ + + L+ GL K G + + E M K P++ ++ ++
Sbjct: 650 LLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIID 709
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K + + +++ M + + + +Y L+HG + + + K M++ GF+P
Sbjct: 710 QYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLP 769
Query: 372 RMGMWREIV 380
W ++
Sbjct: 770 DKFSWHSLI 778
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 136/316 (43%), Gaps = 28/316 (8%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
N+ + + ++ V+ + R PNE Y ++N L + F + I++R+++ + R S
Sbjct: 330 NIGEALRLMDVMVSHGLR----PNEVTYGALLNGLYKNAEFGMVSSILERMRMGGV-RVS 384
Query: 127 --------DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
DG N G + +A++ L DM + P V TF++++N
Sbjct: 385 HISYTAMIDGLCKN---------GMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGK 435
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+ I K G+ + + L+ C+ G L+ A L+ + N +V + T
Sbjct: 436 INNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEA---LNAYAVMNHSGHVADHFT 492
Query: 239 ---LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
L+ C G +EEA + M G+D ++VTF+ +I+G G + + ++M
Sbjct: 493 CNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMN 552
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
G +P+ +Y +L GL EA + R+ C + V + + C +
Sbjct: 553 SFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLS 612
Query: 356 DVDWVLKKMVQQGFVP 371
D ++ +MV F+P
Sbjct: 613 DAIALINEMVTNDFLP 628
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 132/296 (44%), Gaps = 8/296 (2%)
Query: 88 NPNEALYTLIINKL---AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+PN A+YT +++ L A+ I + M VE D +NVI + G+
Sbjct: 663 SPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVE-----PDTVAFNVIIDQYSRKGKT 717
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
SK + L M S N ++ T+N++L+ +Y + G D + L
Sbjct: 718 SKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSL 777
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C++ + + A +L + + T++ L+ CE+ +++AF L+++M +
Sbjct: 778 ILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMV 837
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ T+N L +GL + + ++L+ + G P + Y ++ G+ A +
Sbjct: 838 IPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMK 897
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L M +S V+ ++ GL N K +E+ WVL M++ +P + + ++
Sbjct: 898 LQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLM 953
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 115/287 (40%), Gaps = 12/287 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-----FYNVIKIYGNMAGR 143
P Y ++N + R+ A ++ C S G YNV R
Sbjct: 208 PTAVTYNTLLNWYCKKGRYKAASQLID-------CMASKGIGVDVCTYNVFIDNLCRDSR 260
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+K L M +P+ T+N +++ V ++ + + ++ N
Sbjct: 261 SAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNT 320
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C GN+ A ++D PN TY L++GL + +LERM G
Sbjct: 321 LIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGG 380
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ +++ +I GL K G +EE ++LL+ M P+ ++ ++ G + AK
Sbjct: 381 VRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAK 440
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
E++ +M + P+ + Y LI+ C +++ M G V
Sbjct: 441 EIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHV 487
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 125/280 (44%), Gaps = 28/280 (10%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD P+ + +II++ ++ + + DI+ +K + LC F+ + ++ Y +
Sbjct: 695 KDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLC-FNLATYNILLHGYAKRHA-M 752
Query: 145 SKAIETLFDM------PSYNCWPSV-------KTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
++ DM P W S+ K+F++ + +L L G +
Sbjct: 753 ARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHV--------- 803
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
ID N+L+ CE ++ AF ++ + + PNV TY+ L +GL + +
Sbjct: 804 ----IDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHK 859
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A +L+ + G + LI+G+ + G ++ MKL + MK G ++ + ++
Sbjct: 860 AHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVR 919
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
GL + K+ A ++ M+ ++ P+ ++ L+H C +
Sbjct: 920 GLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKE 959
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 118/273 (43%), Gaps = 17/273 (6%)
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF- 166
+A+++++ K+ CR +G +S AI + +M + + P T+
Sbjct: 591 NAVDNVIFNTKLTSTCR----------------SGNLSDAIALINEMVTNDFLPDNFTYT 634
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
NL+ L K+ + + K + + L+ GL ++G+ AA Y+ +E
Sbjct: 635 NLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLN 694
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
++ EP+ ++ ++ KG + +L M+S+ + + T+NIL+ G K+ +
Sbjct: 695 KDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMAR 754
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
L + M G P+ S+ ++ G K F A +++ + E ++ LI
Sbjct: 755 CFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLIT 814
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
C + ++ ++K+M Q +P + + +
Sbjct: 815 KFCERNEMKKAFELVKQMNQFMVIPNVDTYNAL 847
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+I AI L M P+V TF ++++ + + + V++D N
Sbjct: 926 KIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYN 985
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+L+ GLC NG++EAAF + +E +++ PN Y L+ C GN +
Sbjct: 986 VLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCA-GNYQ 1032
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+++ +P N P V + L+ V +A M G++ T N+++ L
Sbjct: 94 LMETYPICNSNPAV--FDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLV 151
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+ KV+ + M KG P+ A++ +L L ++ +F A L+ +M + P+ V
Sbjct: 152 KEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAV 211
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+Y L++ C + + ++ M +G
Sbjct: 212 TYNTLLNWYCKKGRYKAASQLIDCMASKG 240
>gi|7267637|emb|CAB80949.1| hypothetical protein [Arabidopsis thaliana]
Length = 1117
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 165/333 (49%), Gaps = 11/333 (3%)
Query: 40 HQDSDHHAYKL---NHKDWL-SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYT 95
+ S+H A K N K + SPT V K+ ++ DP+ + + S++ ++ + + +
Sbjct: 29 YSSSEHEARKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHL 88
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
++I KL + + F+ I+D++ + + + F Y +IK+Y A K + T + M
Sbjct: 89 ILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTY-LIKVYAE-AKLPEKVLSTFYKML 146
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQ-GIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
+N P K N +L++LVS + Y + ++ S+ GV + N+L++ C N +L
Sbjct: 147 EFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDL 206
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
A+ + + +++ P+V +Y L+ G C KG V A LL+ M ++G D L
Sbjct: 207 SIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTL 262
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I GL QG +EG K LE M KG P+ + ++ G + EA ++V ++
Sbjct: 263 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 322
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ +++ +I +CN+ E + L+ V++
Sbjct: 323 TLHSDTWEMVIPLICNEDESEKIKLFLEDAVKE 355
>gi|240255715|ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana]
gi|332656619|gb|AEE82019.1| uncharacterized protein [Arabidopsis thaliana]
Length = 1110
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 165/333 (49%), Gaps = 11/333 (3%)
Query: 40 HQDSDHHAYKL---NHKDWL-SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYT 95
+ S+H A K N K + SPT V K+ ++ DP+ + + S++ ++ + + +
Sbjct: 29 YSSSEHEARKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHL 88
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMP 155
++I KL + + F+ I+D++ + + + F Y +IK+Y A K + T + M
Sbjct: 89 ILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTY-LIKVYAE-AKLPEKVLSTFYKML 146
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQ-GIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
+N P K N +L++LVS + Y + ++ S+ GV + N+L++ C N +L
Sbjct: 147 EFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDL 206
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
A+ + + +++ P+V +Y L+ G C KG V A LL+ M ++G D L
Sbjct: 207 SIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTL 262
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I GL QG +EG K LE M KG P+ + ++ G + EA ++V ++
Sbjct: 263 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 322
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ +++ +I +CN+ E + L+ V++
Sbjct: 323 TLHSDTWEMVIPLICNEDESEKIKLFLEDAVKE 355
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 122/250 (48%), Gaps = 1/250 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A++ L M C P+ T+N+++N L + + + + +LG+E+ A
Sbjct: 204 GKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTY 263
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L++G CE G L+ A + +E + P + TY+T+M+GLC+ G V +A LL+ M +
Sbjct: 264 DPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVN 323
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + D V++N LI G + G + E L ++ +G P+ +Y ++ GL
Sbjct: 324 KNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDV 383
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-RMGMWREIV 380
A L MI P ++ L+ G C + + +M+ +G P R IV
Sbjct: 384 AMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIV 443
Query: 381 GCVTFGKDNR 390
G + G ++
Sbjct: 444 GELKLGDPSK 453
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 161/338 (47%), Gaps = 11/338 (3%)
Query: 50 LNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKD-YNPNEALYTLIINKLAQAKRFD 108
L H P ++++ + +R +V ++++R+ + +E Y +I++ LA+
Sbjct: 39 LFHAAVAEPQLLVRVLNTVRHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMR 98
Query: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIK-----IYGNMAGRISKAIETLFDMPSYNCWPSV 163
+ +M+++ K+ +G +I IY + + K + + M S P +
Sbjct: 99 SAYCVMEKVVSVKM---ENGVVDVLILDLLLWIYAKKS-MLEKCLLVFYKMVSKGMLPDL 154
Query: 164 KTFNLVLNLLVSAKLYGEI-QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
K N VL LL ++ + +Y + G+ N +L C+ G ++ A +L
Sbjct: 155 KNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLL 214
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
+ K C PN TY+ L++GL G +E+A L++ M G++ T++ LI G ++G
Sbjct: 215 QMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKG 274
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+++E +L E M +G P +Y ++YGL R +A++L+ M+ + + P VSY
Sbjct: 275 QLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYN 334
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LI+G + + + ++ +G VP + + ++
Sbjct: 335 TLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLI 372
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 6/214 (2%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V T+N +L+ E + K+G + N+L+ GL +G LE A +
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKEL 247
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ E + E + TY L+ G CEKG ++EA L E M S G VT+N ++ GL K
Sbjct: 248 IQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCK 307
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+V + KLL+ M K P+ SY ++YG EA L + + PS V+
Sbjct: 308 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVT 367
Query: 341 YKKLIHGLCNQKLVEDVDWVLK---KMVQQGFVP 371
Y LI GLC + D+D ++ +M++ G P
Sbjct: 368 YNTLIDGLCR---MGDLDVAMRLKDEMIKHGPDP 398
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 2/217 (0%)
Query: 131 YNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN + IYG G I +A ++ PSV T+N +++ L +
Sbjct: 333 YNTL-IYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEM 391
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
K G + D IL++G C+ GNL A + DE + +P+ Y T + G + G+
Sbjct: 392 IKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDP 451
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+AFG+ E M + G D +T+N+ I GL K G ++E +L+++M G P+ +Y +
Sbjct: 452 SKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSI 511
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
++ L +A+ + M+ + + PS V+Y LIH
Sbjct: 512 IHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIH 548
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D N+ + GL + GNL+ A ++ + P+ TY++++H G++ +A
Sbjct: 465 GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKA 524
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ M S+GI VT+ +LI +G+++ + M KG +PN +Y ++ G
Sbjct: 525 RAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALING 584
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L ++ +A + M + +SP+ +Y LI+ CN ++ + K M+ + P
Sbjct: 585 LCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQP 643
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 2/223 (0%)
Query: 127 DGFFYNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D F Y + +I G + G SKA +M + P + T+N+ ++ L E +
Sbjct: 434 DRFAY-ITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASEL 492
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
G+ D ++ G+L A V E + P+V TY+ L+H
Sbjct: 493 VKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAV 552
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+G ++ A M +G+ + +T+N LI+GL K K+++ K M+ KG PN +
Sbjct: 553 RGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYT 612
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
Y ++ + + EA L M+ + P ++ L+ L
Sbjct: 613 YTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 101/231 (43%), Gaps = 13/231 (5%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKV-----------EKLCRF--SDGFFYNVIKIYGN 139
L+ ++N+ Q RF I I+ +K+ E L R D YNV +
Sbjct: 422 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 481
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G + +A E + M P T+ +++ + A + + ++ G+
Sbjct: 482 KLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVV 541
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+L+ G L+ A E ++ PNV TY+ L++GLC+ +++A+ M
Sbjct: 542 TYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEM 601
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+++GI + T+ ILI+ G +E ++L + M + P+S ++ +L
Sbjct: 602 QAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALL 652
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 4/200 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ + P+ Y + I+ L + ++++++ L D Y I MAG +
Sbjct: 464 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLV--PDHVTYTSIIHAHLMAGHL 521
Query: 145 SKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
KA +M S +PSV T+ L+ + V +L I + K GV + N
Sbjct: 522 RKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK-GVHPNVITYNA 580
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+ ++ A+ E + PN TY+ L++ C G+ +EA L + M
Sbjct: 581 LINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDRE 640
Query: 264 IDADTVTFNILISGLRKQGK 283
I D+ T + L+ L K K
Sbjct: 641 IQPDSCTHSALLKHLNKDYK 660
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 11/294 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS---DGFFYNVIKIYGN 139
K++ P A Y +++ A+ ++ VE + F D + YNV+
Sbjct: 272 KKEGIAPTRATYNTLVSAYARLGWIKQATNV-----VEAMTAFGFEPDLWTYNVLAAGLC 326
Query: 140 MAGRISKAIETLFDMPSYN-CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
AG++ +A + +M + P V T+N +++ + + + GV+
Sbjct: 327 QAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSL 386
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
NI++KGLC G LE A L ++ P+V TY+TL+ C+ NV +AF L++
Sbjct: 387 VTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDE 446
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G+ DT T N L+ L K+ + EE +LL +G P+ SY V+ + +
Sbjct: 447 MVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENK 506
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVLKKMVQQGFVP 371
A L M +++PS +Y LI GLC KL E +D L +++++G VP
Sbjct: 507 PEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDK-LNELMKKGLVP 559
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 138/305 (45%), Gaps = 5/305 (1%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD--AIEDIMQRIKVEKLCRF 125
LR P +L+ + +R P+ +++ LA++ A D+ + + +L
Sbjct: 150 LRLPHLAAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRL--H 207
Query: 126 SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
+ + +N++ G ++ A+ TL M + P V T+N +L + GE + +
Sbjct: 208 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTL 267
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
K G+ N L+ G ++ A V++ EP++ TY+ L GLC+
Sbjct: 268 LARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ 327
Query: 246 KGNVEEAFGLLERMESEGI-DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
G V+EAF L + ME I D VT+N L+ K + + + LLE M+ KG +
Sbjct: 328 AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLV 387
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ V+ GL + + EA + M E ++P ++Y LI C + V ++ +M
Sbjct: 388 THNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEM 447
Query: 365 VQQGF 369
V+ G
Sbjct: 448 VRSGL 452
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 132/313 (42%), Gaps = 39/313 (12%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
L TL+ N L + KR++ E++++ D Y + + A+
Sbjct: 459 LNTLLYN-LCKEKRYEEAEELLRSPPQRGFV--PDEVSYGTVMAAYFKENKPEPALYLWD 515
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M PS+ T+N ++ L + E K G+ D NI++ C+ G
Sbjct: 516 EMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEG 575
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+LE AF ++ + +P+V T +TLM+GLC G +E+A L E +G D +T+N
Sbjct: 576 DLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYN 635
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM--- 329
LI L K G V+ + M+ +G P++ +Y VL L + R EA+ ++ ++
Sbjct: 636 TLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDES 695
Query: 330 --ICERMSPSFV-------------------------------SYKKLIHGLCNQKLVED 356
+ ER S + SY K + LC +++
Sbjct: 696 GKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKE 755
Query: 357 VDWVLKKMVQQGF 369
VL +M+Q+G
Sbjct: 756 AKAVLDEMMQKGM 768
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ TFNL+++ S + ++ G+ D N LLK C G L A +
Sbjct: 208 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTL 267
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L K+ P TY+TL+ G +++A ++E M + G + D T+N+L +GL +
Sbjct: 268 LARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ 327
Query: 281 QGKVEEGMKLLERMKGKGCY-PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
GKV+E KL + M+ P+ +Y ++ +R +A L+ M + + S V
Sbjct: 328 AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLV 387
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ ++ GLC + +E+ LK M ++G P + + ++
Sbjct: 388 THNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLI 428
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 129/302 (42%), Gaps = 13/302 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+ P+ Y ++ L QA + D ++D M+ + + D YN + R
Sbjct: 311 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVS----PDVVTYNTLVDACFKYQR 366
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
S A+ L +M S+ T N+V+ L E G + G+ D N
Sbjct: 367 SSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNT 426
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C+ N+ AF ++DE + + + T +TL++ LC++ EEA LL G
Sbjct: 427 LIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRG 486
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D V++ +++ K+ K E + L + M + P+ +Y ++ GL + EA
Sbjct: 487 FVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAI 546
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ + ++ + + P +Y +IH C + +E KM++ F P ++V C
Sbjct: 547 DKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKP------DVVTCN 600
Query: 384 TF 385
T
Sbjct: 601 TL 602
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A+ L M P V T+N +++ A+ + + + G+++D L
Sbjct: 400 GQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTL 459
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL LC+ E A +L P++ P+ +Y T+M ++ E A L + M
Sbjct: 460 NTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSK 519
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ T+N LI GL GK+ E + L + KG P+ +Y +++ + +
Sbjct: 520 RKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEK 579
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A + +M+ P V+ L++GLC +E + + ++G
Sbjct: 580 AFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKG 626
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 112/250 (44%), Gaps = 42/250 (16%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDA 198
G++++AI+ L ++ P T+N++++ G+++ + K+ + D
Sbjct: 540 GKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKE---GDLEKAFQFHNKMLENYFKPDV 596
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N L+ GLC +G LE A + + + ++ + +V TY+TL+ LC+ G+V+ A
Sbjct: 597 VTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFAD 656
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG------CYP----------- 301
ME+ G+ D T+N+++S L + G+ EE +L ++ G YP
Sbjct: 657 MEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKT 716
Query: 302 -------------------NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+ SY + + L + EAK ++ M+ + MS +Y
Sbjct: 717 GKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYI 776
Query: 343 KLIHGLCNQK 352
L+ GL ++
Sbjct: 777 TLMEGLIKRQ 786
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 111/269 (41%), Gaps = 5/269 (1%)
Query: 106 RFDAIEDIMQRIKV---EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPS 162
R +E+ + R+K+ E L D YN + A ++KA + +M
Sbjct: 398 REGQLEEALGRLKMMTEEGLA--PDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMD 455
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
T N +L L K Y E + + S + G D ++ + E A Y+ D
Sbjct: 456 TFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWD 515
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
E K+ P++ TY+TL+ GLC G + EA L + +G+ D T+NI+I K+G
Sbjct: 516 EMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEG 575
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+E+ + +M P+ + ++ GL + +A +L + ++Y
Sbjct: 576 DLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYN 635
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
LI LC V+ M +G P
Sbjct: 636 TLIQALCKDGDVDTALHFFADMEARGLQP 664
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 132/303 (43%), Gaps = 6/303 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
I++LN ++ R PN +Y+ + KL + Q + L + D F Y +I
Sbjct: 344 INLLNFFNVR----PNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGL--YPDCFCYTII 397
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G I+KA + L +M + PSV T+ L++N + + + G+
Sbjct: 398 IGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGL 457
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D N L+ G + G L+ AF +LD P+ TY+ L+H L +G EA
Sbjct: 458 IPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKD 517
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+L + G+ D +TF +I G K+G EE + M + P+ + +L G
Sbjct: 518 ILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYC 577
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+R EA L +M+ + P V Y LIHG C+ + ++ M+ GF+P +
Sbjct: 578 RARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNIT 637
Query: 375 MWR 377
R
Sbjct: 638 THR 640
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 117/230 (50%), Gaps = 3/230 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR KAI L +N P++ ++ + L E + ++ G+ D C
Sbjct: 338 GRSDKAINLL---NFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCY 394
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
I++ G C+ G++ AF L E K P+V TY+ L++ C+ G++ A LL+RM
Sbjct: 395 TIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMML 454
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EG+ D VTFN LI G K+G +++ +LL+ M+ G P++ +Y +++ L+ + E
Sbjct: 455 EGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNE 514
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
AK+++ +I +SP +++ +I G + E+ V M ++ P
Sbjct: 515 AKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKP 564
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 4/238 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ YTL+IN ++ E ++QR+ +E L D +N + G + KA
Sbjct: 423 TPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGL--IPDVVTFNCLIDGFGKKGYLQKA 480
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L M S P T+N +++ L++ E + I + G+ D ++ G
Sbjct: 481 FELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDG 540
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ GN E AF V +++ +P+V T S L++G C ++EA L +M G+ D
Sbjct: 541 FSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPD 600
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
V +N LI G G + L+ M G PN +++ G +K++ + EL
Sbjct: 601 LVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALGF--EKKWVKNPEL 656
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 110/261 (42%), Gaps = 32/261 (12%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++S A+ + ++ N +PS+ N +L L+ + I G+ ++A L+
Sbjct: 199 KVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGMQSFGMHLNASILS 258
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+ ++ C GN+++ + +L E + +V Y+ ++ LC+ V+ A LL +M
Sbjct: 259 LFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHC 318
Query: 263 G--------------------------------IDADTVTFNILISGLRKQGKVEEGMKL 290
G + + ++ ++ L K G + E K
Sbjct: 319 GISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKT 378
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+ M G YP+ Y ++ G +A + +G M+ ++PS +Y LI+ C
Sbjct: 379 FQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCK 438
Query: 351 QKLVEDVDWVLKKMVQQGFVP 371
+ +++L++M+ +G +P
Sbjct: 439 SGDMAMAEYLLQRMMLEGLIP 459
>gi|18407365|ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g61870, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8 [Arabidopsis thaliana]
gi|3367521|gb|AAC28506.1| Similar to gb|U08285 membrane-associated salt-inducible protein
from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
come from this gene [Arabidopsis thaliana]
gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis thaliana]
gi|32815835|gb|AAP88326.1| At1g61870 [Arabidopsis thaliana]
gi|332195777|gb|AEE33898.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 408
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 172/376 (45%), Gaps = 22/376 (5%)
Query: 16 IQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVI 75
I+SLSSASTI + +P S + S L + + +DP ++
Sbjct: 23 IRSLSSASTILSPDS---KTPLTSKEKS---------------KAALSLLKSEKDPDRIL 64
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+ S D + ++ + LA+ K F A+ +++ + S+ F + I
Sbjct: 65 EICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIV 124
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-GV 194
+Y A + ++ D+ + +VK+ N +L + AK Y E + +Y K+ G+
Sbjct: 125 LYAQ-ANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGI 183
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E D N ++K CE+G+ +++ ++ E ++ +PN ++ ++ G + +E
Sbjct: 184 EPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGK 243
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+L M+ G++ T+NI I L K+ K +E LL+ M G PN+ +Y +++G
Sbjct: 244 VLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFC 303
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
++ F EAK+L M+ P Y LI+ LC E + K+ +++ +VP
Sbjct: 304 NEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFS 363
Query: 375 MWREIVGCVTFGKDNR 390
+ + +V KD++
Sbjct: 364 IMKSLVN--GLAKDSK 377
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 147/295 (49%), Gaps = 8/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P +Y +IN Q + I +++K + D YN + ++KA
Sbjct: 367 PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI--RPDHITYNALINGLCKLEMVTKAE 424
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILL 205
+ + +M PSV+TFN +++ +A G+++ +T + + G++ D ++
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTA---GQLEKCFTVLSDMQQKGIKSDVISFGSVV 481
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
K C+NG + A +LD+ ++ PN + Y++++ E G+ E+A L+E+M++ G+
Sbjct: 482 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVS 541
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
A VT+N+L+ GL + +++E +L+ ++ +G P+ SY ++ +K +A EL
Sbjct: 542 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 601
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ M + P+ + L+ L + V D++ + ++M+ + P ++ +V
Sbjct: 602 LQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 656
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 138/338 (40%), Gaps = 38/338 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y ++++ L + R D +M + + DGF Y+++ G +
Sbjct: 262 PNVVTYNVLLSGLCRTGRMDETRALMDEMASHSM--LPDGFTYSILFDGLTRTGESQTML 319
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ T +++LN L + + ++ G+ N L+ G
Sbjct: 320 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGY 379
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE----------------------- 245
C+ +L AF + ++ ++ P+ TY+ L++GLC+
Sbjct: 380 CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSV 439
Query: 246 ------------KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
G +E+ F +L M+ +GI +D ++F ++ K GK+ E + +L+
Sbjct: 440 ETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 499
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M K PN+ Y ++ ++ +A LV +M +S S V+Y L+ GLC
Sbjct: 500 MIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ 559
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNR 390
+++ + ++ + QG P + + I+ C G ++
Sbjct: 560 IDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDK 597
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 131/295 (44%), Gaps = 6/295 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + ++ A D +++R+ + D F YNV+ +G+ S A+
Sbjct: 155 PDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDAL 214
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILL 205
+ +M P+ T+N +++ V G+++ + ++ G + + N+LL
Sbjct: 215 KVFDEMVDMGVAPNRITYNTMIDGHVKG---GDLEAGFRLRDQMLHDGPKPNVVTYNVLL 271
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC G ++ ++DE + P+ TYS L GL G + L +G+
Sbjct: 272 SGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVM 331
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
T +IL++GL K GKV + ++ E + G P + Y ++ G + A +
Sbjct: 332 LGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+M + P ++Y LI+GLC ++V + ++ +M + G P + + ++
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
DA N+++ GL +G A V DE PN TY+T++ G + G++E F L
Sbjct: 193 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLR 252
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
++M +G + VT+N+L+SGL + G+++E L++ M P+ +Y + GL
Sbjct: 253 DQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRT 312
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
L + + + + L++GLC V V + +V G VP ++
Sbjct: 313 GESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIY 372
Query: 377 REIVGCVTFGKDNRNRVYVTETVDS 401
++ +D R + E + S
Sbjct: 373 NTLINGYCQVRDLRGAFCIFEQMKS 397
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 8/320 (2%)
Query: 56 LSPTEVL-----KIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
L PT V+ + +RD + Q K + P+ Y +IN L + +
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQM-KSRHIRPDHITYNALINGLCKLEMVTKA 423
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
ED++ ++ + S F +I YG AG++ K L DM V +F V+
Sbjct: 424 EDLVMEMEKSGV-DPSVETFNTLIDAYGT-AGQLEKCFTVLSDMQQKGIKSDVISFGSVV 481
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
E I V +A N ++ E+G+ E A ++++
Sbjct: 482 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVS 541
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
++ TY+ L+ GLC ++EA L+ + ++G+ D V++N +IS +G ++ ++L
Sbjct: 542 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 601
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L+ M G P + ++ L R + + L +M+ + + PS Y ++
Sbjct: 602 LQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 661
Query: 351 QKLVEDVDWVLKKMVQQGFV 370
+ V + K+M ++G
Sbjct: 662 CENDSKVASLKKEMSEKGIA 681
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ + NL+L L+ + +++ + G D N +++ G+L+ A +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 221 LDEFPKQNC--EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
L + P+ +Y+ ++ GL G +A + + M G+ + +T+N +I G
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G +E G +L ++M G PN +Y +L GL R E + L+ M M P
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299
Query: 339 VSYKKLIHGL 348
+Y L GL
Sbjct: 300 FTYSILFDGL 309
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 127/268 (47%), Gaps = 30/268 (11%)
Query: 83 KRKDYNPNEALYTLIINKLA-------QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+ K P+ Y ++N L K F+++ D ++ V F YN++
Sbjct: 1217 RHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV---------FSYNILI 1267
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
+I +A +M PS T+N ++ L + G +A KL VE
Sbjct: 1268 NGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQS-------GRVRTAQKLFVE 1320
Query: 196 IDAC-------CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ C +LL GLC+NG+LE A + K +PN+ +S L+ G+C G
Sbjct: 1321 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 1380
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+EEA+ + + G++ DT+ +NILI+GL +G + E +KLL +M+ KGC P+S ++
Sbjct: 1381 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 1440
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSP 336
++ LL + EA +L+ M SP
Sbjct: 1441 IIQNLLKENEIHEAIQLLEEMRNRNFSP 1468
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 109/218 (50%), Gaps = 1/218 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ +A+E +M V T+N +++ L A L+ E+ G DA
Sbjct: 1134 GRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTF 1193
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
IL+ GLC+ G + A +L+ + EP++ TY+TLM+GLC G +E+A L E +
Sbjct: 1194 TILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLAD 1253
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
GI + ++NILI+G K K++E + E M+ KG P++ +Y ++ L R
Sbjct: 1254 RGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRT 1313
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVD 358
A++L M +Y L+ GLC N L E +D
Sbjct: 1314 AQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMD 1351
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 5/254 (1%)
Query: 135 KIYGNMAGRISKAIET-----LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
K YG + + KA +T L + NC V T+ ++++ L + E +++
Sbjct: 1052 KTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEM 1111
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G+ D + L+ GLC G L+ A E + +V TY++L+HGL G
Sbjct: 1112 IGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLW 1171
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+E L M G D TF ILI GL K+GKV E ++LE M+ KG P+ +Y +
Sbjct: 1172 KEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTL 1231
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ GL + +A +L + + + SY LI+G C + +++ ++M +G
Sbjct: 1232 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGL 1291
Query: 370 VPRMGMWREIVGCV 383
P + ++G +
Sbjct: 1292 KPSTVTYNTLIGAL 1305
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 121/245 (49%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F + ++ G++ +A + L M P + T+N ++N L + ++
Sbjct: 1189 DAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 1248
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S A G++++ NIL+ G C++ ++ AF +E + +P+ TY+TL+ LC+
Sbjct: 1249 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQS 1308
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G V A L M++ G T+ +L+ GL K G +EE M L + +K PN +
Sbjct: 1309 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVF 1368
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+L G+ + EA + + + P ++Y LI+GLCN+ ++ + +L +M +
Sbjct: 1369 SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 1428
Query: 367 QGFVP 371
+G +P
Sbjct: 1429 KGCLP 1433
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 2/211 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++IN + ++ D + ++ + L YN + +GR+ A + +
Sbjct: 1263 YNILINGYCKDQKIDEAFRFFEEMRPKGL--KPSTVTYNTLIGALCQSGRVRTAQKLFVE 1320
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + + + T+ ++L+ L E ++ S K + + +ILL G+C G
Sbjct: 1321 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 1380
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
LE A+ DE K EP+ Y+ L++GLC KG + EA LL +ME +G D++TFN+
Sbjct: 1381 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 1440
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+I L K+ ++ E ++LLE M+ + P+ A
Sbjct: 1441 IIQNLLKENEIHEAIQLLEEMRNRNFSPDEA 1471
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 3/257 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++IN L +A++ + +++K C+ D F Y +I G ++A++ +
Sbjct: 1054 YGILINGLCKARKTGLAIKLHEKMKGN--CK-GDVFTYGMIIDALCKDGMTTEALDMFSE 1110
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P V ++ +++ L E + G+ D N L+ GL G
Sbjct: 1111 MIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGL 1170
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ + L+ + P+ T++ L+ GLC++G V EA +LE M +G + D +T+N
Sbjct: 1171 WKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNT 1230
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L++GL G++E+ KL E + +G N SY ++ G ++ EA M +
Sbjct: 1231 LMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKG 1290
Query: 334 MSPSFVSYKKLIHGLCN 350
+ PS V+Y LI LC
Sbjct: 1291 LKPSTVTYNTLIGALCQ 1307
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 101/245 (41%), Gaps = 34/245 (13%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P TFN +L + Y + +Y +G++ D LNIL+ C + F V
Sbjct: 944 PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
F K+ EP+ T +TL+ G+ + + +A L + M +G+ D T+ ILI+GL K
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCK 1063
Query: 281 QGKVEEGMKLLERMKGK----------------------------------GCYPNSASY 306
K +KL E+MKG G P+ Y
Sbjct: 1064 ARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVY 1123
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL R EA E M +S +Y LIHGL L ++V W L MV
Sbjct: 1124 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 1183
Query: 367 QGFVP 371
+GF P
Sbjct: 1184 RGFSP 1188
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKR-------FDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+ K P+ Y +I L Q+ R F ++ Q +K+ C DG N
Sbjct: 1287 RPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKN--- 1343
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
G + +A++ + P+++ F+++L+ + A E + +K G+E
Sbjct: 1344 ------GHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 1397
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D NIL+ GLC G L A +L + ++ C P+ T++ ++ L ++ + EA L
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 1457
Query: 256 LERMESEGIDADTVTFNILI 275
LE M + D ++L+
Sbjct: 1458 LEEMRNRNFSPDEAVTSMLL 1477
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 175/409 (42%), Gaps = 57/409 (13%)
Query: 20 SSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSP----TEVLKIFSNLRDPISVI 75
+SAS+ T R A + A +LN L P +L ++RD +S
Sbjct: 1 ASASSRTPPRRAAPYLAVLLRRGRGEAAARLNRHLRLLPLPESPALLSALPSVRDAVSYN 60
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIE--DIMQRIKVEKLCRFSDGFFYNV 133
+VL ++ + L ++ ++ A R +AI +M+ + ++ + G ++
Sbjct: 61 TVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSM 120
Query: 134 --------IKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
+ YG + A + A+E L +M P+V ++ +L+ +
Sbjct: 121 QDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRW 180
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ ++ + G+E D L+ LC +G ++ A V+D ++ EPNV TY+ L
Sbjct: 181 ESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVL 240
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER-MKGK- 297
++ +C++G+V EA L + M +G+ D VT+N LI+GL +++E M LLE M+G+
Sbjct: 241 INSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGET 300
Query: 298 -----------------------------------GCYPNSASYQEVLYGLLDKKRFPEA 322
GC N ++ ++ GLL + +A
Sbjct: 301 RVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKA 360
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EL+ M + P +Y LI+G C + VE + L +M QG P
Sbjct: 361 MELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEP 409
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 145/303 (47%), Gaps = 5/303 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ +++ + D + + +LN+ + PN +Y+ +++ + R++++ +
Sbjct: 128 DVVTYGTLIRGLCDAADVDTAVELLNEMCE-SGIEPNVVVYSCLLHGYCKTGRWESVGKV 186
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ + + D Y + G++ KA + M P+V T+N+++N +
Sbjct: 187 FEEMSGRGI--EPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSM 244
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF--PKQNCEP 231
E + + ++ GV+ D N L+ GL ++ A +L+E + P
Sbjct: 245 CKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRP 304
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
++ T+++++HGLC+ G + +A + M G + V FN+LI GL + KV++ M+L+
Sbjct: 305 DLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELM 364
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ M G P+S +Y ++ G ++ A+ + M + M P V Y L+ +C+Q
Sbjct: 365 DEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQ 424
Query: 352 KLV 354
++
Sbjct: 425 GMM 427
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 15/255 (5%)
Query: 138 GNMAGRISKAIETLFDMPS----YNCWPSVK---TFNLVLNLL-----VSAKLYGEIQGI 185
G A R+++ + L +P + PSV+ ++N VL L + A L+ + +
Sbjct: 25 GEAAARLNRHLR-LLPLPESPALLSALPSVRDAVSYNTVLAALCRQGCLDAALF--LLRV 81
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ +L +A L++ LC + A +L P+V TY TL+ GLC+
Sbjct: 82 MSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCD 141
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+V+ A LL M GI+ + V ++ L+ G K G+ E K+ E M G+G P+
Sbjct: 142 AADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVM 201
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ L + +A ++ M + P+ V+Y LI+ +C + V + + K M
Sbjct: 202 YTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMS 261
Query: 366 QQGFVPRMGMWREIV 380
++G P + + ++
Sbjct: 262 EKGVQPDVVTYNTLI 276
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 136/306 (44%), Gaps = 6/306 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
V++ ++R PN Y ++IN + + D+ + + EK + D YN +
Sbjct: 221 VMDMMTER-GLEPNVVTYNVLINSMCKEGSVREALDLRKNMS-EKGVQ-PDVVTYNTLIT 277
Query: 137 YGNMAGRISKAIETLFDM--PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
+ + +A+ L +M P + TFN V++ L + + A+ G
Sbjct: 278 GLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGC 337
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ N+L+ GL ++ A ++DE +P+ TYS L++G C+ VE A
Sbjct: 338 RCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAES 397
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L M +G++ + V + L+ + QG + + L M + C ++A+Y +++G
Sbjct: 398 YLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHGAF 456
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
A+E + MI E + P V+Y I+ + + VLK+M GFVP +
Sbjct: 457 KSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVA 516
Query: 375 MWREIV 380
++ ++
Sbjct: 517 VFDSLI 522
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ KA+E + +M S P T+++++N + + + G+E +
Sbjct: 356 KVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYI 415
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
LLK +C+ G + A + +E +NC+ + YST++HG + G + A L+ M E
Sbjct: 416 PLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDE 474
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
G+ D VT++I I+ K G + ++L++M G P+ A + ++ G
Sbjct: 475 GLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQG 524
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+ DA +I + ++G+L AA VL + P+V + +L+ G KG+ E+
Sbjct: 475 GLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKI 534
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
L M ++ + D + +++ L G EG KLL+ + G
Sbjct: 535 LELTREMTAKDVALDPKIISTIVTSL---GASIEGQKLLQSLPG 575
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P +YT++I L R E + + ++ + + + YN + + KA+
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGM--LPNLYTYNTMMDGYCKIAHVKKAL 283
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E +M P+V TF ++++ L + A GV + N L+ G
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ GNL A + E K P+V TYS L+ GLC +EEA GLL+ M+ +G +
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N LI G K+G +E+ +++ +M KG PN ++ ++ G + A L
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + + P V+Y LI G ++ + K+M + G P
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 129/299 (43%), Gaps = 21/299 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN + ++I+ L + + + I + + F YN + AG +S+A+
Sbjct: 296 PNVVTFGILIDGLCKTDEMVSARKFL--IDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
++ + P V T+++++ L E G+ K G +A N L+ G
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ GN+E A V + ++ EPN+ T+STL+ G C+ G +E A GL M +G+ D
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL--- 325
V + LI G K G +E +L + M+ G +PN + ++ GL R +A +L
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533
Query: 326 -------------VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ R +C SP+ V Y LI GLC + M G P
Sbjct: 534 KTGTDTTGSKTNELDRSLC---SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 153/367 (41%), Gaps = 59/367 (16%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM-------QRIKVEK 121
R + + + S+R D N LY+ II+ L AK + +M Q + +
Sbjct: 48 RTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSR 107
Query: 122 LC-------------RFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL 168
+C +F+ F +I + M G + +A+ + M + P+++ N+
Sbjct: 108 ICCSVFNVLSRLESSKFTPNVFGVLIIAFSEM-GLVEEALWVYYKM---DVLPAMQACNM 163
Query: 169 VLNLLVSA-------KLYGEI--QGIYTSAAKLGVEIDACC------------------- 200
VL+ LV K+YG++ +G + G ID CC
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223
Query: 201 -------LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
IL++GLC + A + PN+ TY+T+M G C+ +V++A
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L + M +G+ + VTF ILI GL K ++ K L M G PN Y ++ G
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EA L + + P +Y LI GLC +E+ D +L++M ++GF+P
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 374 GMWREIV 380
+ ++
Sbjct: 404 VTYNTLI 410
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 111/295 (37%), Gaps = 54/295 (18%)
Query: 66 SNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF 125
NL + +S+ S + ++ + P+ Y+++I L R + + ++Q +K +
Sbjct: 347 GNLSEALSLHSEIEKH----EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF--L 400
Query: 126 SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
+ YN + G + KAIE M P++ TF+ +++ A G+
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460
Query: 186 YTSAA-----------------------------------KLGVEIDACCLNILLKGLCE 210
YT + G+ + L+ L+ GLC+
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520
Query: 211 NGNLEAAFYVL-------------DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+G + A + +E + C PN Y+ L+ GLC G + +A
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
M G+ D T ++I G + + + M L + G PNS+ Y+ + G
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKG 635
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 2/226 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A R S+A + L +M C P + T+ ++ +K + ++ G D
Sbjct: 67 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 126
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+ L+ GLC+ G L+ A + K +C PN TY++L+ G C G ++EA LLERM
Sbjct: 127 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 186
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G D VT+ L++G K ++++ LL +M KG PN ++ ++ GL + R
Sbjct: 187 AETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRL 246
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVLKKM 364
+A ++G M + SP+ +Y ++ G C +L E ++L++M
Sbjct: 247 SDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM 292
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 138/292 (47%), Gaps = 20/292 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
P+ YT +I ++K+ D + +++ + GF +V+ Y + G
Sbjct: 87 PDIFTYTTLITGFCKSKKSDDALRVFEQL-------VARGFRPDVV-TYSCLIDGLCKEG 138
Query: 143 RISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ +AI+ M S +C P+ T+N +++ E + A+ G D
Sbjct: 139 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 198
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G C+ L+ A+ +L++ ++ PNV T+++LM GLC + + +A +L M
Sbjct: 199 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRR 258
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMK-LLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ T+N ++ G + ++EE K +LE M C PN S+ ++ GL R
Sbjct: 259 KSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD---CPPNVVSFNIMIRGLCKVNRSS 315
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ-GFVP 371
EA ELV R +P V Y +I LC +K V++ V +KM+++ G +P
Sbjct: 316 EAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLP 367
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 145/310 (46%), Gaps = 9/310 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P Y +I+ L +A+R D+++ + V C D F Y + + + A+
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEM-VYSGC-IPDIFTYTTLITGFCKSKKSDDAL 109
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI-DACCLNILLKG 207
+ + P V T++ +++ L E ++ K G + + N L+ G
Sbjct: 110 RVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG 169
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C G ++ A +L+ + P+V TY+TLM+G C+ +++A+ LL +M +G+ +
Sbjct: 170 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPN 229
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE-LV 326
VTF L+ GL ++ ++ + + +L M+ K C P +Y +L G + EA++ ++
Sbjct: 230 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFML 289
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
M C P+ VS+ +I GLC + ++++ ++ P + M+ ++ +
Sbjct: 290 EEMDC---PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCRE 346
Query: 387 K--DNRNRVY 394
K D RVY
Sbjct: 347 KKVDEACRVY 356
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG----- 142
+P+ YT ++N + R D D++ ++ G NV+ M G
Sbjct: 192 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMT-------RKGLTPNVVTFTSLMDGLCREN 244
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+S A+ L +M +C P+V T+N +L+
Sbjct: 245 RLSDAVHILGEMRRKSCSPTVYTYNTILD------------------------------- 273
Query: 203 ILLKGLCENGNLEAAF-YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
G C LE A ++L+E +C PNV +++ ++ GLC+ EA L+E
Sbjct: 274 ----GYCRVNQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARR 326
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLY 311
+ D V + +I L ++ KV+E ++ +M + GC PNS +Y Y
Sbjct: 327 RRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTFDY 377
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 123/251 (49%), Gaps = 2/251 (0%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+ NVIK + + G + K L +M C P++ T+N + L E +
Sbjct: 245 YTNVIKAHCKV-GDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLM 302
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ G+ D +L+ G C+ + A + + P PN TY+ L+ G ++GN+
Sbjct: 303 MEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNI 362
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EEA + + M + G+ + VT+N +I G+ K G++ + M L M G P++ +Y +
Sbjct: 363 EEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLL 422
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ G L +A EL+ M +++PS +Y LI GLC+ ++ + VL +M++ G
Sbjct: 423 IDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGV 482
Query: 370 VPRMGMWREIV 380
P + M+ ++
Sbjct: 483 KPNVFMYGTLI 493
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 3/285 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +I A K D I+ M ++EK C+ + F YN G + +A+
Sbjct: 240 PDVYTYTNVIK--AHCKVGDVIKGKMVLSEMEKECK-PNLFTYNAFIGGLCQTGAVDEAL 296
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M P T+ L+++ K E + I+ S G+ + L+ G
Sbjct: 297 EVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGF 356
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ GN+E A + DE + + NV TY+ ++ G+ + G + +A L M GI+ DT
Sbjct: 357 IKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDT 416
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N+LI G K + + +LL MK + P+ +Y ++ GL +A E++ +
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
MI + P+ Y LI + E +LK M+ G +P +
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDL 521
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 147/319 (46%), Gaps = 6/319 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + T V+K + D I VL++ K+ PN Y I L Q D ++
Sbjct: 241 DVYTYTNVIKAHCKVGDVIKGKMVLSEM--EKECKPNLFTYNAFIGGLCQTGAVDEALEV 298
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNL 172
+++ +EK DG Y ++ + G + SK + +F+ MPS P+ T+ +++
Sbjct: 299 -KKLMMEKGLG-PDGHTYTLL-VDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDG 355
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
+ E I G++++ N ++ G+ + G + A + +E EP+
Sbjct: 356 FIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPD 415
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TY+ L+ G + ++ +A LL M++ + T+++LISGL +++ ++L+
Sbjct: 416 TWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLD 475
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+M G PN Y ++ + + R+ A EL+ MI + P Y LI GLC K
Sbjct: 476 QMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAK 535
Query: 353 LVEDVDWVLKKMVQQGFVP 371
VE+ +L M ++G P
Sbjct: 536 KVEEAKMLLVDMGEKGIKP 554
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 130/295 (44%), Gaps = 16/295 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC--RFS-----DGFFYNVIKI 136
K P+ YTL+++ + KR + I + + L RF+ DGF
Sbjct: 304 EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE---- 359
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G I +A+ +M + +V T+N ++ + A + ++ G+E
Sbjct: 360 -----GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEP 414
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N+L+ G ++ ++ A +L E + P+ TYS L+ GLC ++++A +L
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVL 474
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
++M G+ + + LI ++ + E ++LL+ M G P+ Y ++ GL
Sbjct: 475 DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRA 534
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K+ EAK L+ M + + P+ +Y I+ ++ + K M+ G VP
Sbjct: 535 KKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 121/292 (41%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y L+I+ ++ +++ +K KL F Y+V+ + + KA
Sbjct: 414 PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT--PSPFTYSVLISGLCHSSDLQKAN 471
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M P+V + ++ V Y + GV D C N L+ GL
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +E A +L + ++ +PN TY ++ + G ++ A + M S GI +
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNN 591
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V + ILI G G E + + M KG P+ +Y +++ L + EA + +
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLK 651
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P Y LI G C + +E + +M+ G P + ++ ++
Sbjct: 652 FLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 124/291 (42%), Gaps = 4/291 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + P+ Y+++I+ L + +++ ++ + + + + +IK Y
Sbjct: 443 KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM-IRNGVKPNVFMYGTLIKAYVQ-ES 500
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R AIE L M + P + +N ++ L AK E + + + G++ +A
Sbjct: 501 RYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYG 560
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+ ++G ++ A + PN Y+ L+ G C+ GN EA + M +
Sbjct: 561 AFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEK 620
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D ++ +I L K GK +E M + + G P+ Y ++ G + +A
Sbjct: 621 GLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKA 680
Query: 323 KELVGRMICERMSPSFVSYKKLI--HGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L M+ ++P+ V Y LI +G C + + + +M+ +G P
Sbjct: 681 SQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISP 731
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 102/223 (45%), Gaps = 1/223 (0%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
++ F++ ++ E ++ ++ G C N L++ L + + + V
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
+ P+V TY+ ++ C+ G+V + +L ME E + T+N I GL +
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQT 289
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G V+E +++ + M KG P+ +Y ++ G +KR EAK + M ++P+ +Y
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
LI G + +E+ + +M+ +G + + ++G +
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIA 392
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 1/284 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NPN +Y +IN K + E ++ DG+ Y ++ G + KA
Sbjct: 693 NPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA 752
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +LF S+ FN +++ E + ++ + + IL+
Sbjct: 753 L-SLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 811
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ +E A + + +N PN TY++L+ + GN + L + ME+ GI D
Sbjct: 812 YGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACD 871
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+ + ++ S K+GK E +KLL + +G + +++ L +K+ EL+
Sbjct: 872 AIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLS 931
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M E +S S + L+ G ++ VL M + G+VP
Sbjct: 932 EMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 975
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 7/179 (3%)
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG---EIQGIYTSA 189
+I YG A + +A + DM + N P+ T+ +LL+S G ++ ++
Sbjct: 808 LIDAYGK-AEMMEEAEQLFLDMETRNIIPNTLTYT---SLLLSYNQIGNRFKMISLFKDM 863
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G+ DA ++ C+ G A +L++ + + + L+ LC++ +
Sbjct: 864 EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQI 923
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
LL M E + + T N L+ G K G +E K+L M+ G P S S +
Sbjct: 924 STVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTD 982
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 66 SGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 125
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 185
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K++ L + M KG PN ++ ++ G R
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + + P ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 246 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 305
Query: 381 -GCVTFG 386
GC G
Sbjct: 306 DGCCKEG 312
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 133/255 (52%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 124 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 180
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCK 240
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 241 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 300
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 301 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 360
Query: 366 QQGFVPRMGMWREIV 380
G P G + IV
Sbjct: 361 SVGLKPDTGTYTMIV 375
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 109/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L G++ G+ + L+ G C+NG ++ A +
Sbjct: 191 PDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 250
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D T+ LI G K
Sbjct: 251 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 310
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 311 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGT 370
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +++ C + V +LK+M + G P
Sbjct: 371 YTMIVNEFCKKGDVWKGSKLLKEMQRDGHAP 401
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D + + V+ L +G + + GR+ A
Sbjct: 190 QPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGL--VPNGVTFTTLIDGHCKNGRVDLA 247
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 248 MEIYKQMLSQSLLPDLITYN-----------------------------------TLIYG 272
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ A ++DE + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 273 LCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 332
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G P++ +Y ++ K + +L+
Sbjct: 333 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLK 392
Query: 328 RMICERMSPSFVSYKKLIHG 347
M + +PS V+Y L++G
Sbjct: 393 EMQRDGHAPSVVTYNVLMNG 412
>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 543
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 121/238 (50%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A++ M + +P VK FNL+ ++ K Y + + +GV+ + NI
Sbjct: 7 VDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNI 66
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ LC + F VL K EP++ T++T+++GLC +GNV +A ++ ++ G
Sbjct: 67 VINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMG 126
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
++D T +I+GL K G + L++M+ + C + +Y V+ GL EA
Sbjct: 127 YESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEAL 186
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+L +M + + P+ +Y LIHGLCN ++ +L M+++G +P + + I G
Sbjct: 187 DLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAG 244
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 126/309 (40%), Gaps = 58/309 (18%)
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAG---------------------RISKAIETLFDMPSY 157
V+ LC+ DG + + ++ M G R +A L +M
Sbjct: 173 VDGLCK--DGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRK 230
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
P V+TFN++ + + + I++ +G+E + N ++ C ++ A
Sbjct: 231 GIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDA 290
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
V D ++ C PN+ TY++L+HG CE N+ +A L M + G+D D VT++ LI G
Sbjct: 291 MEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGG 350
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSAS-------------------------------- 305
K GK +L M G P+ +
Sbjct: 351 FCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLD 410
Query: 306 ---YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
Y +L G+ + +A EL + + + V+Y +I+GLC + L++D + +L
Sbjct: 411 IIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLM 470
Query: 363 KMVQQGFVP 371
KM + G P
Sbjct: 471 KMEENGCPP 479
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 104/256 (40%), Gaps = 35/256 (13%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ TF ++N L + +G E D ++ GLC+ G+ AA
Sbjct: 94 PSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSY 153
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + +QNC +V YS ++ GLC+ G V EA L +M +GI + T+N LI GL
Sbjct: 154 LKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCN 213
Query: 281 QGKVEEGMKLLERMKGKGCYP-----------------------------------NSAS 305
+ +E LL M KG P N +
Sbjct: 214 FDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVT 273
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ + +A E+ MI + P+ V+Y LIHG C K + + L +MV
Sbjct: 274 YNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMV 333
Query: 366 QQGFVPRMGMWREIVG 381
G P + W ++G
Sbjct: 334 NNGLDPDVVTWSTLIG 349
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 6/240 (2%)
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLL--VSAKLYG-EIQGIYTSAAKLGVEIDACCL 201
+ AI + M P+V T N+V+N L ++ ++G + G+ K+GVE
Sbjct: 43 TTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGL---MFKIGVEPSIVTF 99
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++ GLC GN+ A +D E + T +++GLC+ G+ A L++ME
Sbjct: 100 TTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEE 159
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + D ++ ++ GL K G V E + L +M GKG PN +Y +++GL + R+ E
Sbjct: 160 QNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKE 219
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A L+ M+ + + P ++ + ++ + M G + + I+G
Sbjct: 220 AAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIG 279
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 123/269 (45%), Gaps = 18/269 (6%)
Query: 89 PNEALYTLIINKL------AQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNM 140
P+ +T I+N L AQA RF D ++D+ R++ G N + K+
Sbjct: 94 PSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESD-----RYTRGAIINGLCKV---- 144
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G S A+ L M NC V ++ V++ L + E +++ G++ +
Sbjct: 145 -GHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFT 203
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ GLC + A +L ++ P+V+T++ + + G + A + M
Sbjct: 204 YNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMG 263
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI+ + VT+N +I ++++ M++ + M KGC PN +Y +++G + K
Sbjct: 264 HMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMN 323
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLC 349
+A +G M+ + P V++ LI G C
Sbjct: 324 KAMYFLGEMVNNGLDPDVVTWSTLIGGFC 352
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 87/165 (52%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG+ A E F M + P ++T ++L+ L + E ++ K+ ++D
Sbjct: 354 AGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIII 413
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+I+L G+C +G L A + + + +V TY+ +++GLC++G +++A LL +ME
Sbjct: 414 YSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKME 473
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G D T+N+ + GL ++ ++ + K L MKGKG N+ +
Sbjct: 474 ENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATT 518
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 113/271 (41%), Gaps = 43/271 (15%)
Query: 84 RKDYNPNEALYTLIINKLAQA---KRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
RK P+ + +I + + R +I M + +E + YN I M
Sbjct: 229 RKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEH-----NVVTYNSIIGAHCM 283
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
++ A+E M C P++ T+N +++ K + G++ D
Sbjct: 284 LNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVT 343
Query: 201 LNILLKGLCENGNLEAA---FYVLD--------------------------------EFP 225
+ L+ G C+ G AA F+V+ E
Sbjct: 344 WSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELE 403
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
K N + ++ YS +++G+C G + +A L + S+G+ D VT+NI+I+GL K+G ++
Sbjct: 404 KMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLD 463
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ LL +M+ GC P+ +Y + GLL +
Sbjct: 464 DAEDLLMKMEENGCPPDECTYNVFVQGLLRR 494
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 173/365 (47%), Gaps = 17/365 (4%)
Query: 10 NHRQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLR 69
+HR +++SL S + R + PS +H H + + + VL LR
Sbjct: 40 SHRLRLLRSLQS---VPADRLLSHPLPSTAHACLAAHLLARD-RLYAHSRRVLSRLVALR 95
Query: 70 DPISVISVLNQYSKRK-DYNPNEALYTLIINKL----AQAKRFDAIEDIMQRIKVEKLCR 124
P S+++ + P + +++ L A D + R++ ++
Sbjct: 96 RPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPP 155
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
+ + ++++ + +GR+ + LF+ +P+ P+V TFN+V++ L E +
Sbjct: 156 NTRTCNHILLRLARDRSGRL---VRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEAR 208
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+++ ++G D N L+ G + G L+ +++E + C+ +V TY+ L++
Sbjct: 209 SLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCF 268
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C+ G +E A+G M+ EG+ A+ VTF+ + K+G V E MKL +M+ +G N
Sbjct: 269 CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNE 328
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y ++ G R +A L+ M+ + + + V+Y L+ GLC ++ V + + VL+
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388
Query: 364 MVQQG 368
M + G
Sbjct: 389 MEKAG 393
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 137/302 (45%), Gaps = 4/302 (1%)
Query: 81 YSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG 138
+S+ K+ P+ + +I+ + D +E +++ ++ C+ +D YN +
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG-CK-ADVVTYNALINCF 268
Query: 139 NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
GR+ A M +V TF+ ++ L E ++ G+ ++
Sbjct: 269 CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNE 328
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
L+ G C+ G L+ A +LDE +Q NV TY+ L+ GLC++ V EA +L
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
ME G+ A+ + + LI G E+ + LL MK KG + + Y ++ GL + +
Sbjct: 389 MEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHK 448
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
EAK L+ +M + P+++ Y ++ V + +L+K++ GF P G E
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNE 508
Query: 379 IV 380
V
Sbjct: 509 AV 510
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 117/252 (46%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F +N++ + G +++A M C P V TFN +++ E++ +
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEE 248
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ G + D N L+ C+ G +E A+ ++ NV T+ST + C++G
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V EA L +M G+ + T+ LI G K G++++ + LL+ M +G N +Y
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ GL +++ EA++++ M + + + Y LIHG K E +L +M +G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428
Query: 369 FVPRMGMWREIV 380
+ ++ ++
Sbjct: 429 LELDISLYGALI 440
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 22/258 (8%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGR+ AI L +M +V T+ ++++ L + E + + K GV +
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G N N E A +L E + E ++ Y L+ GLC ++EA LL +M+
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS--------------- 305
G++ + + + ++ K GKV E + +L+++ G PN+
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKG 520
Query: 306 -------YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
Y +L G L + +A L +MI + Y I G CN ++ +
Sbjct: 521 MSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAR 580
Query: 359 WVLKKMVQQGFVPRMGMW 376
V +M+ G P ++
Sbjct: 581 EVFSEMIGHGIAPDRAVY 598
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 22/184 (11%)
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
G+ + G+E+D L++GLC L+ A +L + + EPN Y+T+M
Sbjct: 419 GLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDAC 478
Query: 244 CEKGNVEEAFGLLER----------------------MESEGIDADTVTFNILISGLRKQ 281
+ G V EA +L++ M +G+ D V + L+ G KQ
Sbjct: 479 FKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQ 538
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G + + L +M G + Y + G + PEA+E+ MI ++P Y
Sbjct: 539 GNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVY 598
Query: 342 KKLI 345
LI
Sbjct: 599 NCLI 602
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 32/267 (11%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ N YT++++ L + ++ ED+++ + EK ++ Y + I+G+ +
Sbjct: 356 RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM--EKAGVRANELLYTTL-IHGHFMNK 412
Query: 144 IS-KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE------- 195
S KA+ L +M + + + ++ L + E + + T + G+E
Sbjct: 413 NSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYT 472
Query: 196 --IDAC--------CLNILLKGL-----CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+DAC + +L K L NG L A + +E + + Y+ L+
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALL 532
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
G ++GN+ +AF L +M G+ D + ISG + E ++ M G G
Sbjct: 533 DGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIA 592
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVG 327
P+ A Y ++ + PE +EL G
Sbjct: 593 PDRAVYNCLI------TQIPEIRELGG 613
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 73/200 (36%), Gaps = 27/200 (13%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-- 140
K K + +LY +I L + D + ++ ++ G N I IY M
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD-------ESGLEPNYI-IYTTMMD 476
Query: 141 ----AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+G++ +AI L + P+ N E ++ G+ +
Sbjct: 477 ACFKSGKVPEAIAMLQKILDSGFQPNNGCLN-------------EAVQLFNEMVHKGMSL 523
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D LL G + GNL AF + + + ++ Y+ + G C + EA +
Sbjct: 524 DKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVF 583
Query: 257 ERMESEGIDADTVTFNILIS 276
M GI D +N LI+
Sbjct: 584 SEMIGHGIAPDRAVYNCLIT 603
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 113/249 (45%), Gaps = 17/249 (6%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ +FN +L+ L K Y ++ +Y G+ D C LNILL LC L F
Sbjct: 67 PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
++ PN+ TY+TL+ GLC + + EA L RM+ G D VT+ LI GL
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186
Query: 281 QGKVEEGMKLLERMKGK------GCYPNSASYQEVLYGLLDKKRFPEAKELV-------- 326
G + +KL + M C PN +Y ++ GL R EAK+L
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246
Query: 327 --GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCV 383
M+ + + P V++ LI LC + V + +L M++ G VP + + ++ G
Sbjct: 247 IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 306
Query: 384 TFGKDNRNR 392
G N R
Sbjct: 307 MVGDLNSAR 315
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 18/313 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R P+ + + +++ LA+ K + + + ++++ L SD N++ R
Sbjct: 62 RSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS--SDRCTLNILLNCLCNVNR 119
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ + + P++ T+N ++ L E ++ KLG D
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQ------NCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
L+KGLC GN+ A + E NC+PNV TY+ ++ GLC+ G +EA L E
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239
Query: 258 RMESEG----------IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
M+++G + D VTFN+LI L K+GKV E KLL M G P+ +Y
Sbjct: 240 EMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYN 299
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G A+EL M + P +SY LI+G VE+ + +M+
Sbjct: 300 SLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLV 359
Query: 368 GFVPRMGMWREIV 380
G P + + ++
Sbjct: 360 GKRPNVITYDSLL 372
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 129/265 (48%), Gaps = 36/265 (13%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGE----------- 181
M G ++ A E MPS C P V ++N+++N + + KLY E
Sbjct: 307 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 366
Query: 182 -----IQGIYTS-----AAKL-------GVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
++GI+ + A KL G+ ++ I L GLC+N L A + E
Sbjct: 367 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 426
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
N + + + L+ GLC+ G +E A+ L E++ +EG + + VT+ I+I G ++G+V
Sbjct: 427 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 486
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
++ L+++M+ GC P+ +Y ++ G + + E +L+ RM + +SP ++ +
Sbjct: 487 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIV 546
Query: 345 IHGLCNQKLVEDVDWVLKKM-VQQG 368
+ L + ++ +L + +Q+G
Sbjct: 547 VDMLSKDEKYQECLHLLPRFPIQKG 571
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 9/313 (2%)
Query: 77 VLNQYSKRK-DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS--------D 127
+LN S+ + + PN Y +I++ L + R D + + + +K + + D
Sbjct: 200 MLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPD 259
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+NV+ G++ +A + L M P + T+N ++ + ++
Sbjct: 260 MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFV 319
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
S G E D N+L+ G + +E A + +E PNV TY +L+ G+ G
Sbjct: 320 SMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAG 379
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V++A L M++ GI ++ T+ I + GL K + E MKL +K +
Sbjct: 380 KVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLN 439
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ GL + A EL ++ E P+ V+Y +IHG C + V+ + +++KM
Sbjct: 440 CLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN 499
Query: 368 GFVPRMGMWREIV 380
G P + + ++
Sbjct: 500 GCTPDIITYNTLM 512
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 142/320 (44%), Gaps = 2/320 (0%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
++++ + + + ++++K +P Y +++ L +A + +K
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
C + F YN++ + RI + E +M C P++ T N++++ LV +
Sbjct: 818 GCC--PNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSIN 875
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ +Y C L+ GL + G E A + +E P C+PN Y+ L+
Sbjct: 876 KALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILI 935
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
+G + GNV A L +RM EGI D ++ IL+ L G+V++ + E +K G
Sbjct: 936 NGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLD 995
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P++ SY ++ GL +R EA L M +SP +Y LI N +V+ +
Sbjct: 996 PDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKM 1055
Query: 361 LKKMVQQGFVPRMGMWREIV 380
+++ G P + + ++
Sbjct: 1056 FEELQFMGLEPNVFTYNALI 1075
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 2/276 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I+ L +R D ++ + E L + Y + Y G KA+
Sbjct: 400 PNLHTYNTLISGLLNLRRLDEALELFNNM--ESLGVAPTAYSYVLFIDYYGKLGDPEKAL 457
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+T M PS+ N L L E + I+ G+ D+ N+++K
Sbjct: 458 DTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCY 517
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G ++ A +L E + CEP++ ++L+ L + G V+EA+ + R++ +
Sbjct: 518 SKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTV 577
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+NILI+GL K+GK+ + + L MK GC PN+ ++ +L L A ++ R
Sbjct: 578 VTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCR 637
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
M SP ++Y +I+GL + W +M
Sbjct: 638 MTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM 673
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 155/334 (46%), Gaps = 18/334 (5%)
Query: 48 YKLNHKDWLSPTEVLKIFSNL-------RDPISVISVLNQYSKRKDYNPNEALYTLIINK 100
YK + L P+ +K +S L RD +++ +L + + PN YT+ I
Sbjct: 215 YKRMISEGLKPS--MKTYSALMVALGRRRDTGTIMDLLEEM-ETLGLRPNIYTYTICIRV 271
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCW 160
L +A R D I++ ++ E C D Y V+ AG++ KA E M + +
Sbjct: 272 LGRAGRIDDAYGILKTMEDEG-CG-PDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHK 329
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGI---YTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
P + T+ + L+ YG+++ + ++ G D IL++ LC++G ++ A
Sbjct: 330 PDLVTY---ITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQA 386
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
F +LD + PN+ TY+TL+ GL ++EA L MES G+ ++ + I
Sbjct: 387 FDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDY 446
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
K G E+ + E+MK +G P+ A+ LY L + R EAK++ + +SP
Sbjct: 447 YGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPD 506
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
V+Y ++ ++ +L +M+ +G P
Sbjct: 507 SVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEP 540
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+ + YN + + G +A++ M S PS+KT++ ++ L + G I +
Sbjct: 191 NAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLL 250
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
LG+ + I ++ L G ++ A+ +L + C P+V TY+ L+ LC
Sbjct: 251 EEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAA 310
Query: 247 GNVEEA----------------------------FGLLE-------RMESEGIDADTVTF 271
G +++A +G LE ME++G D VT+
Sbjct: 311 GKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTY 370
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
IL+ L K GKV++ +L+ M+ +G PN +Y ++ GLL+ +R EA EL M
Sbjct: 371 TILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMES 430
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
++P+ SY I E +KM ++G +P +
Sbjct: 431 LGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIA 473
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 167/377 (44%), Gaps = 49/377 (12%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDY------------NPNEALYTLIINKL 101
D L E L + N+ I VL + + D P+ YT++I+ L
Sbjct: 248 DLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDAL 307
Query: 102 AQAKRFDAIEDIMQRIK-----------------------VEKLCRF-----SDGFFYNV 133
A + D +++ +++ +E + RF +DG+ +V
Sbjct: 308 CAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDV 367
Query: 134 IKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+ Y + +G++ +A + L M P++ T+N +++ L++ + E ++
Sbjct: 368 VT-YTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFN 426
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ LGV A + + + G+ E A ++ K+ P++ + ++ L E G
Sbjct: 427 NMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMG 486
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+ EA + + + G+ D+VT+N+++ K G++++ KLL M +GC P+
Sbjct: 487 RIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVN 546
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQ 366
++ L R EA ++ GR+ +++P+ V+Y LI GL + KL++ +D + M +
Sbjct: 547 SLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALD-LFGSMKE 605
Query: 367 QGFVPRMGMWREIVGCV 383
G P + ++ C+
Sbjct: 606 SGCPPNTVTFNALLDCL 622
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 6/263 (2%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
+ L DP + + KR P+ A + LA+ R +DI I C
Sbjct: 447 YGKLGDPEKALDTFEKMKKR-GIMPSIAACNASLYSLAEMGRIREAKDIFNDIHN---CG 502
Query: 125 FS-DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
S D YN++ + AG+I KA + L +M S C P + N +++ L A E
Sbjct: 503 LSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAW 562
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
++ L + NIL+ GL + G L A + + C PN T++ L+ L
Sbjct: 563 QMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCL 622
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C+ V+ A + RM D +T+N +I GL K+G+ +MK K P+
Sbjct: 623 CKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPDH 681
Query: 304 ASYQEVLYGLLDKKRFPEAKELV 326
+ +L G++ R +A ++V
Sbjct: 682 VTLYTLLPGVVKDGRVEDAIKIV 704
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G ++A N L+ L + G + A V + +P+++TYS LM L + +
Sbjct: 187 GFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTI 246
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LLE ME+ G+ + T+ I I L + G++++ +L+ M+ +GC P+ +Y ++
Sbjct: 247 MDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDA 306
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L + +AKEL +M P V+Y L+ N +E V +M G+ P
Sbjct: 307 LCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPD 366
Query: 373 MGMWREIV 380
+ + +V
Sbjct: 367 VVTYTILV 374
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ GL EAA + E C PN+ TY+ L+ + ++E F L M
Sbjct: 792 NCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLC 851
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + +T NI+IS L K + + + L + P +Y ++ GLL R E
Sbjct: 852 RGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEE 911
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A ++ M + P+ Y LI+G V + K+M+++G P + + +V
Sbjct: 912 AMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVE 971
Query: 382 CV 383
C+
Sbjct: 972 CL 973
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L+ L +G +E +V D KQ N TY T+ L KG + +A L +M
Sbjct: 126 NYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQ 185
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + ++N LI L + G +E +K+ +RM +G P+ +Y ++ L ++
Sbjct: 186 AGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGT 245
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L+ M + P+ +Y I L ++D +LK M +G P
Sbjct: 246 IMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGP 295
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
LK + + + + F ++ + P P Y ++ L G VE+ + + M+ + I
Sbjct: 96 LKSISDPNSALSYFKMVSQLPNIVHTPETCNY--MLEFLRVHGRVEDMAFVFDLMQKQVI 153
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ + T+ + L +G + + L +M+ G N+ SY ++Y LL EA +
Sbjct: 154 NRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALK 213
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ RMI E + PS +Y L+ L ++ + +L++M G P +
Sbjct: 214 VYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNI 262
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 142/340 (41%), Gaps = 43/340 (12%)
Query: 77 VLNQYSKRKD-YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
VL + RKD +PN Y L++ L Q R A ++ + K C D + ++
Sbjct: 144 VLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA-RKGCPPDDVTYATIVS 202
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
+ + R+ +A E L MP P ++N ++ L E+ + + G++
Sbjct: 203 VLCKL-DRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQ 256
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
+ ++ C+ G L A +L C PNV T++ L+ GL + G V +A +
Sbjct: 257 PNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDM 316
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG--- 312
M +EG TV++NILI GL G ++ +L M+ GC+PN +Y ++ G
Sbjct: 317 WRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSK 376
Query: 313 --------------------------------LLDKKRFPEAKELVGRMICERMSPSFVS 340
K F +AK L+ +M+ E P+ V+
Sbjct: 377 AGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVT 436
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ LI LC+ + V V +M + G VP + E++
Sbjct: 437 FNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELI 476
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 148/362 (40%), Gaps = 67/362 (18%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK---------VEKLCR---------- 124
RK P++ Y I++ L + R D +++ + V LCR
Sbjct: 187 RKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSV 246
Query: 125 FSD----GFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLL 173
SD G NVI Y + AG + A L M C P+V TF LV L
Sbjct: 247 VSDMVGRGLQPNVIT-YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLF 305
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+++ + ++ G NIL++GLC G+L+ A +L+ + C PNV
Sbjct: 306 DDGRVHDALD-MWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNV 364
Query: 234 RTYSTLMHGLCEKGNV-----------------------------------EEAFGLLER 258
RTYSTL+ G + G++ +A L+++
Sbjct: 365 RTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDK 424
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M E +TVTFN LI L +V + + M+ GC PN +Y E+++GL +
Sbjct: 425 MLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGN 484
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
+A +V M + S V+Y ++ GLC ++ + + KM+ QG P +
Sbjct: 485 CGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSA 544
Query: 379 IV 380
I+
Sbjct: 545 II 546
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 131/302 (43%), Gaps = 14/302 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM---- 140
+ + P+ Y ++I L I+ ++ G F NV + Y +
Sbjct: 323 EGWAPSTVSYNILIRGLCSVGDLKGASSILNSME-------QHGCFPNV-RTYSTLIDGF 374
Query: 141 --AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
AG + AI DM C P+V + ++++ ++ + + + +
Sbjct: 375 SKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNT 434
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N L++ LC+ + A V E + C PN RTY+ L+HGL +GN +A ++
Sbjct: 435 VTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTE 494
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M+S GI+ VT+N ++SGL + E M + +M +G PN+ ++ +++ +
Sbjct: 495 MQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGE 554
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
A ++G M + + Y L+ LCNQ + D L KM+ +G P W
Sbjct: 555 VRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNV 614
Query: 379 IV 380
+V
Sbjct: 615 LV 616
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 30/234 (12%)
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ G + +Y + K GV + N+L++ LC+N + AA +LDE ++ C P+ TY
Sbjct: 138 NMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTY 197
Query: 237 STLMHGLCEKGNVEEA------------------------------FGLLERMESEGIDA 266
+T++ LC+ ++EA F ++ M G+
Sbjct: 198 ATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQP 257
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ +T+ ++ K G++ +L RM GC PN ++ ++ GL D R +A ++
Sbjct: 258 NVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMW 317
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ E +PS VSY LI GLC+ ++ +L M Q G P + + ++
Sbjct: 318 RWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLI 371
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 16/292 (5%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
S+LN + + PN Y+ +I+ ++A I + G NV+
Sbjct: 350 SILNSMEQHGCF-PNVRTYSTLIDGFSKAGDLGGAISIWNDMS-------RSGCKPNVV- 400
Query: 136 IYGNMAGRISKAI-----ETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+Y NM K + ++L D M NC P+ TFN ++ L + G G++
Sbjct: 401 VYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEM 460
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ G + N L+ GL GN A +++ E E ++ TY+T++ GLC+
Sbjct: 461 RRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMS 520
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EA + +M +GI + TF+ +I K+G+V +L M C+ N Y +
Sbjct: 521 REAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTIL 580
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVDWV 360
+ L ++ + +A + +M+ E + P+ V++ L+ G+ N +E D++
Sbjct: 581 MAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFI 632
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 5/172 (2%)
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C + A V D K PNV TY+ L+ LC+ V A +L+ M +G D
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ ++S L K +++E ++L M P +ASY ++ L + R E +V
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSD 249
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + P+ ++Y ++ C + +L +MV G P + + +V
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALV 301
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 166/388 (42%), Gaps = 42/388 (10%)
Query: 40 HQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIIN 99
H +++N + + L R I ++ ++ S R P+ +Y II+
Sbjct: 225 HDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTR----PDVVMYNTIID 280
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
L + K + D + + F D Y+ + +AG++ A L +M N
Sbjct: 281 GLCKDKLVNEAYDFYTEMNSRGI--FPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNI 338
Query: 160 WPSVKTFNLVLNLLV------SAK--------------------------LYGEIQG--- 184
P V T+ ++++ L AK L GE+
Sbjct: 339 NPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQ 398
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
I+ + + V C NI++ GLC+ +++ A +L E +N PN TY++L+ GLC
Sbjct: 399 IFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLC 458
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ G + A L++ + G AD +T+ L+ GL K +++ + L +MK +G PN
Sbjct: 459 KSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKY 518
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ GL R A++L ++ + +Y +I GLC + ++++ + KM
Sbjct: 519 TYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKM 578
Query: 365 VQQGFVPRMGMWREIVGCVTFGKDNRNR 392
G +P + EI+ F KD ++
Sbjct: 579 EDNGCIPD-AVTFEIIIRSLFEKDENDK 605
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 147/326 (45%), Gaps = 25/326 (7%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ + ++ F +L SVL + K Y PN + T ++ L
Sbjct: 166 DLVTLSILINCFCHLGQMAFSFSVLGKILKL-GYQPNTIILTTLMKGLCL---------- 214
Query: 114 MQRIKVEKLCRFSD-----GFFYNVIKIYGNMAGRISK------AIETLFDMPSYNCWPS 162
+ +V+K F D GF N + YG + + K AI+ L + + P
Sbjct: 215 --KGEVKKSLHFHDKVVAQGFQMNQVS-YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPD 271
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
V +N +++ L KL E YT G+ D + L+ G C G L AF +L+
Sbjct: 272 VVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLN 331
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
E +N P+V TY+ L+ LC++G ++EA LL M EG+ + VT++ L+ G G
Sbjct: 332 EMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVG 391
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+V ++ M P+ SY ++ GL K EA L+ M+ + + P+ V+Y
Sbjct: 392 EVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYN 451
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQG 368
LI GLC + ++K++ +G
Sbjct: 452 SLIDGLCKSGRITSALDLMKELHHRG 477
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 143/299 (47%), Gaps = 3/299 (1%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
+ S+LN+ + K+ NP+ YT++I+ L + + ++++ + E + + Y
Sbjct: 324 MGAFSLLNEMT-LKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGV--KPNVVTY 380
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ + + G + A + M PSV ++N+++N L K E +
Sbjct: 381 STLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLH 440
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
V + N L+ GLC++G + +A ++ E + +V TY++L+ GLC+ N+++
Sbjct: 441 KNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDK 500
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A L +M+ GI + T+ LI GL K +++ KL + + KGC + +Y ++
Sbjct: 501 AIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIG 560
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
GL + EA + +M P V+++ +I L + + + +L +M+ +G +
Sbjct: 561 GLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ F +L LV K + + G+E D L+IL+ C G + +F V
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K +PN +TLM GLC KG V+++ +++ ++G + V++ L++GL K
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ +KLL ++ + P+ Y ++ GL K EA + M + P ++
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309
Query: 341 YKKLIHGLC 349
Y LI G C
Sbjct: 310 YSTLICGFC 318
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + T ++++N + KLG + + L L+KGLC G ++ + +
Sbjct: 165 PDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHF 224
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+ Q + N +Y TL++GLC+ G A LL +E D V +N +I GL K
Sbjct: 225 HDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCK 284
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
V E M +G +P+ +Y ++ G + A L+ M + ++P +
Sbjct: 285 DKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYT 344
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI LC + +++ +L M ++G P + + ++
Sbjct: 345 YTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLM 384
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 8/296 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +IN + R ++ +++ K L + F Y + G KA
Sbjct: 339 PDITTYNTMINFSCKGGRIKEADEFLEKAKERGL--LPNKFSYTPLMHAYCKQGDYVKAA 396
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNILL 205
LF + P + ++ ++ +V ++GEI K+ GV DA N+L+
Sbjct: 397 GMLFRIAEIGEKPDLVSYGAFIHGVV---VHGEIDVALMVREKMMEKGVFPDAQIYNVLM 453
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC+NG A +L E +N +P+V ++TLM G G ++EA + + + +G+D
Sbjct: 454 SGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVD 513
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
V +N +I G K GK+ + + L +MK P+ +Y V+ G + + A ++
Sbjct: 514 PGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKM 573
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
G+M+ + P+ ++Y LI+G C + + + V + M VP + + +VG
Sbjct: 574 FGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVG 629
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 38/306 (12%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K K P Y +IN +A F+A++ ++ + L + F NVI G
Sbjct: 263 KMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGL-NMNVKVFNNVIDAEFKY-G 320
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++KA ET+ M C P + T+N ++N
Sbjct: 321 LVTKAAETMRRMAEMGCGPDITTYNTMINFS----------------------------- 351
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
C+ G ++ A L++ ++ PN +Y+ LMH C++G+ +A G+L R+
Sbjct: 352 ------CKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEI 405
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D V++ I G+ G+++ + + E+M KG +P++ Y ++ GL RFP
Sbjct: 406 GEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAM 465
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM-GMWREIVG 381
K L+ M+ + P + L+ G +++ + K ++++G P + G I G
Sbjct: 466 KLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKG 525
Query: 382 CVTFGK 387
FGK
Sbjct: 526 FCKFGK 531
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 142/288 (49%), Gaps = 17/288 (5%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
++ ++ LA + F IE +++ +K + L + + F +I YG +G + +A++
Sbjct: 94 HSSLLKLLASFRVFPEIELVLENMKAQHL-KPTREAFSALILAYGE-SGSLDRALQLFHT 151
Query: 154 MPS-YNCWPSVKTFNLVLNLLV-SAKLYGEIQ---GIYTSAAKLGVEIDACCLNILLKGL 208
+ +NC P+V N +LN LV S K+ +Q + + G +D +I++KGL
Sbjct: 152 VREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGL 211
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G +E ++ + + C P+V Y+ ++ G C+KG+++ A L+ ++ +G+
Sbjct: 212 CNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTV 271
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL-----YGLLDKKRFPEAK 323
T+ LI+G K G+ E +LL M +G N + V+ YGL+ K A
Sbjct: 272 ETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTK-----AA 326
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
E + RM P +Y +I+ C +++ D L+K ++G +P
Sbjct: 327 ETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLP 374
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 148/395 (37%), Gaps = 82/395 (20%)
Query: 68 LRDPISVISVLNQYSKRKDY---------------NPNEALYTLIINKLAQAKRFDAIED 112
L + S +++ Y K+ DY P+ Y I+ + D
Sbjct: 373 LPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVA-- 430
Query: 113 IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
+M R K+ + F D YNV+ GR L +M N P V F +++
Sbjct: 431 LMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDG 490
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF-------------- 218
+ E I+ + GV+ N ++KG C+ G + A
Sbjct: 491 FIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPD 550
Query: 219 -----YVLDEFPKQN----------------CEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
V+D + KQ+ +PNV TY++L++G C+K ++ A +
Sbjct: 551 EYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFR 610
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M+S + + VT+ L+ G K GK E+ + E M GC PN A++ ++ GL +
Sbjct: 611 GMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTA 670
Query: 318 RFP---EAK-----------ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
P E K + M+ E +Y +I LC +V+ +L K
Sbjct: 671 TSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTK 730
Query: 364 MVQQGFV----------------PRMGMWREIVGC 382
M+ +GF+ + WR I+ C
Sbjct: 731 MLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISC 765
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 18/226 (7%)
Query: 160 WPSVKTFNL---------VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
W S + F+ +L LL S +++ EI+ + + ++ + L+ E
Sbjct: 79 WASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGE 138
Query: 211 NGNLEAA---FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM----ESEG 263
+G+L+ A F+ + E NC P V ++L++GL + G V+ A L ++M + G
Sbjct: 139 SGSLDRALQLFHTVREM--HNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTG 196
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D T +I++ GL GK+EEG +L++ GKGC P+ Y ++ G K A
Sbjct: 197 AVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCAT 256
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ + + + P+ +Y LI+G C E VD +L +M +G
Sbjct: 257 RTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGL 302
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/304 (19%), Positives = 129/304 (42%), Gaps = 4/304 (1%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
+K + PN+ YT +++ A K+ D ++ ++ ++ D Y I+G +
Sbjct: 367 AKERGLLPNKFSYTPLMH--AYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAF-IHGVVV 423
Query: 142 -GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G I A+ M +P + +N++++ L + ++ + + V+ D
Sbjct: 424 HGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYV 483
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G NG L+ A + ++ +P + Y+ ++ G C+ G + +A L +M+
Sbjct: 484 FATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMK 543
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ D T++ +I G KQ + +K+ +M PN +Y ++ G K
Sbjct: 544 NVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMI 603
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A+++ M + P+ V+Y L+ G E + + M+ G P + ++
Sbjct: 604 RAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLI 663
Query: 381 GCVT 384
+T
Sbjct: 664 NGLT 667
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 116/299 (38%), Gaps = 51/299 (17%)
Query: 45 HHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQA 104
HHA D + + V+ + D S + + Q K K + PN YT +IN +
Sbjct: 546 HHA-----PDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHK-FKPNVITYTSLINGFCKK 599
Query: 105 KRFDAIEDIMQRIK-------VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY 157
E + + +K V GFF AG+ KA M
Sbjct: 600 ADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFF---------KAGKPEKATSIFELMLMN 650
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE-A 216
C P+ TF+ ++N L + T+ + + +E E ++E
Sbjct: 651 GCPPNDATFHYLINGLTN-----------TATSPVLIE--------------EKDSMENE 685
Query: 217 AFYVLDEFP---KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+LD F + + + Y++++ LC+ G V+ A LL +M ++G D+V F
Sbjct: 686 RSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTA 745
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
++ GL +GK +E ++ K + Y L L + R EA ++ +I E
Sbjct: 746 MLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTLIEE 804
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 115/239 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +S+A+E M C V +N +LN L KL + ++ + GV D C
Sbjct: 374 GMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTF 433
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G C+ GN+ A + ++N +P++ TY+ L+ G C+ +E+A L M S
Sbjct: 434 TTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMIS 493
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
I + +++ IL++G G V E +L + M KG P + V+ G +
Sbjct: 494 RKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSK 553
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E +G+MI E + P ++Y LI+G + ++ +++ KM +G P + + I+
Sbjct: 554 ADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVIL 612
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 140/283 (49%), Gaps = 12/283 (4%)
Query: 94 YTLIINKLAQAKRF-DA---IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKAI 148
Y I+N L + K DA +++++R V C F+ I+G+ G + KA+
Sbjct: 398 YNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFT-------TLIHGHCKEGNMGKAL 450
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M N P + T+N++++ + ++ + + IL+ G
Sbjct: 451 SLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGY 510
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G + AF + DE ++ +P + T +T++ G C G++ +A L +M SEG+ D+
Sbjct: 511 CNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDS 570
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+N LI+G K +++ L+ +M+ KG P+ +Y +L G + R EA+ ++ +
Sbjct: 571 ITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRK 630
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
MI + P +Y LI+G +Q +++ +M+Q+GFVP
Sbjct: 631 MIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVP 673
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 132/281 (46%), Gaps = 4/281 (1%)
Query: 93 LYTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET 150
+YTL ++N L + + D ++ + I +E+ F+D YN + G + +A E
Sbjct: 185 VYTLNIMVNALCKDHKIDDVKPFL--IDMEQKGIFADIVTYNTLINAYCREGLLGEAFEV 242
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
+ M P++ T+N V+N L Y +G++ +G+ D N LL C
Sbjct: 243 MNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCR 302
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
N N A + + + P++ ++S+L+ G++++A M++ G+ D V
Sbjct: 303 NNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVI 362
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ ILI+G + G + E +++ ++M +GC + +Y +L GL KK +A L M+
Sbjct: 363 YTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMV 422
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P F ++ LIHG C + + + M Q+ P
Sbjct: 423 ERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKP 463
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 14/290 (4%)
Query: 88 NPNEALY-TLII-----NKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
+P+ Y TL++ N +AK D D++ R L FS ++I + +
Sbjct: 287 SPDTTTYNTLLVESCRNNNFLEAK--DIFSDMLHRGVSPDLISFS-----SLIGV-SSRN 338
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A+ DM + P + +++N + E I + G +D
Sbjct: 339 GHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAY 398
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L GLC+ L A + DE ++ P+ T++TL+HG C++GN+ +A L M
Sbjct: 399 NTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQ 458
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ I D VT+NILI G K ++E+ +L M + +PN SY ++ G + E
Sbjct: 459 KNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSE 518
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A L MI + + P+ V+ +I G C + D L KM+ +G P
Sbjct: 519 AFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGP 568
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 129/297 (43%), Gaps = 3/297 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
V+N S K P Y +IN L + R+ + + + L D YN + +
Sbjct: 242 VMNSMSG-KGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLS--PDTTTYNTLLV 298
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+A + DM P + +F+ ++ + + + G+
Sbjct: 299 ESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVP 358
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D IL+ G C NG + A + D+ +Q C +V Y+T+++GLC+K + +A L
Sbjct: 359 DNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALF 418
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ M G+ D TF LI G K+G + + + L M K P+ +Y ++ G
Sbjct: 419 DEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKT 478
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+A EL MI ++ P+ +SY L++G CN V + + +M+++G P +
Sbjct: 479 TEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTL 535
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 7/237 (2%)
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG--VEIDACCLNILL 205
+E+L M S C F+L++ V A+ E + + G V I+AC N LL
Sbjct: 101 VESLISMSS-TCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINAC--NSLL 157
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GL + G ++ A+ V +E + E NV T + +++ LC+ +++ L ME +GI
Sbjct: 158 GGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIF 217
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
AD VT+N LI+ ++G + E +++ M GKG P +Y V+ GL K R+ AK +
Sbjct: 218 ADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGV 277
Query: 326 VGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
M+ +SP +Y L+ C N +E D + M+ +G P + + ++G
Sbjct: 278 FNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKD-IFSDMLHRGVSPDLISFSSLIG 333
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 110/238 (46%), Gaps = 8/238 (3%)
Query: 66 SNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF 125
N+ +S+ ++ Q K+ P+ Y ++I+ + + ++ + K+ F
Sbjct: 444 GNMGKALSLFGIMTQ----KNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKI--F 497
Query: 126 SDGFFYNV-IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
+ Y + + Y N+ G +S+A +M P++ T N V+ + +
Sbjct: 498 PNHISYAILVNGYCNL-GFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADE 556
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
GV D+ N L+ G + ++ AF+++++ + +P+V TY+ +++G C
Sbjct: 557 FLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFC 616
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
+G ++EA +L +M GID D T+ LI+G Q ++E + + M +G P+
Sbjct: 617 RQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 8/285 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +T +++ +A+ KRFD + + +++++ + Y I N R S+
Sbjct: 80 PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGI----SPVLYTC-NIVMNCVCRSSQPC 134
Query: 149 ET---LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
L M P + TF +L+ + ++ +G + L+
Sbjct: 135 RASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLI 194
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
LC+N +L A + ++ PNV TY++L+ GLCE G +A LL M GI
Sbjct: 195 HCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQ 254
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ +TF LI K GK+ E +L + M YP+ +Y ++ GL R EA+++
Sbjct: 255 PNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQM 314
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
M P+ V+Y LIHG C K VED + +M Q+G V
Sbjct: 315 FYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLV 359
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + T N+V+N + + KLG E D LL G C +E A +
Sbjct: 115 PVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALAL 174
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+ PNV TY+TL+H LC+ ++ A + +M GI + VT+N L+SGL +
Sbjct: 175 FDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCE 234
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ + LL M +G PN ++ ++ + + EAKEL MI + P +
Sbjct: 235 IGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFT 294
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LI+GLC +++ + M G+ P
Sbjct: 295 YTALINGLCTYGRLDEARQMFYLMESNGYYP 325
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 55/329 (16%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA----- 141
+ PN YT +I+ L + + + +I ++ +G NV+ Y ++
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMG-------DNGIRPNVVT-YNSLVSGLCE 234
Query: 142 -GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GR S A L DM P+V TF +++ V E + +Y ++ V D
Sbjct: 235 IGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFT 294
Query: 201 LNILLKGLCENGNLEAA---FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
L+ GLC G L+ A FY+++ PN TY+TL+HG C+ VE+ +
Sbjct: 295 YTALINGLCTYGRLDEARQMFYLMES---NGYYPNEVTYTTLIHGFCKSKRVEDGTKIFY 351
Query: 258 RMESEGIDADTV-----------------------------------TFNILISGLRKQG 282
M +G+ A+T+ T+N+L+ GL G
Sbjct: 352 EMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNG 411
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
VE+ + + + M+ + N +Y ++ G+ + +A +L + + M P+ ++Y
Sbjct: 412 YVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYT 471
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+I G C + + + D + KKM + GF+P
Sbjct: 472 TMISGFCRRGFIHEADALFKKMKEDGFLP 500
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 120/259 (46%), Gaps = 3/259 (1%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ ++A++ M PS+ F +L+++ K + + ++ LG+ N
Sbjct: 62 QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ +C + A L + K EP++ T+++L+HG C +E+A L +++
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + VT+ LI L K + +++ +M G PN +Y ++ GL + R+ +A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-G 381
L+ M+ + P+ +++ LI + + + K M+Q P + + ++ G
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301
Query: 382 CVTFGK--DNRNRVYVTET 398
T+G+ + R Y+ E+
Sbjct: 302 LCTYGRLDEARQMFYLMES 320
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 37/218 (16%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PNE YT +I+ ++KR + I + + L ++ Y V+ + GR
Sbjct: 323 YYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLV--ANTITYTVLIQGYCLVGRPDV 380
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A E M S P ++T+N +LL
Sbjct: 381 AQEVFNQMGSRRAPPDIRTYN-----------------------------------VLLD 405
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC NG +E A + K+ + N+ TY+ ++ G+C+ G VE+AF L + S+G+
Sbjct: 406 GLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKP 465
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ +T+ +ISG ++G + E L ++MK G PN +
Sbjct: 466 NVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNES 503
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 127/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ +E A + +E PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ + G + A V D K P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M++ G+ D T+++LI+GL K+ K+E+ +L E M G PN ++
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +
Sbjct: 246 TLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K G+ N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + +P+V TYS L++GLC++ +E+A L E M G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V M++ ++M + P+ +Y ++YGL K +A++L+ M + + P
Sbjct: 252 CKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGSCKEGDLETAXXYRKRMIKE 340
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 132/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQS-VFDAITKWGLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V T+++++N L + ++ G+ + L+ G C+NG + A
Sbjct: 203 QPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G+VP
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E A +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 2/218 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + + ++ + + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLV--PNGVTFTTLIDGHCKNGRVXLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE A K+N + Y+ L+ GLC++G +A +L M S G+ +
Sbjct: 321 SCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
T+ ++I+ K+G V G KLL+ M+ G P+ +
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 129/275 (46%), Gaps = 14/275 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------ 141
+P+ ++ ++ A+ D I +++ ++L N++ YG +
Sbjct: 339 SPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSP-------NIVT-YGALIDALCKL 390
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ A+ M P + F+ ++ L + + + + ++ G+ +D
Sbjct: 391 GRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFF 450
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ LC G + A ++D + P+V +Y+TL+ G C G ++EA LL+ + S
Sbjct: 451 NTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVS 510
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D VT+N L+ G K ++++ L M KG P+ +Y +L+GL RF E
Sbjct: 511 IGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSE 570
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
AKEL MI R + +Y +I+GLC V++
Sbjct: 571 AKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDE 605
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 171/399 (42%), Gaps = 74/399 (18%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKD--YNPNEALYTLIINKLAQAKRFDAIE 111
D S + +LK F N + + +L+ + D + PN YT +I+ L +A+ D +
Sbjct: 163 DVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAK 222
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+ Q + ++K R ++ + +I Y ++ G+ + ++ L +M ++ P + ++L+
Sbjct: 223 GVFQHM-IDKGVRPNNHTYTCLIHGYLSI-GKWKEVVQMLQEMSTHGLQPDCYIYAVLLD 280
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL----------------- 214
L E + I+ S + G++ + ILL G G+L
Sbjct: 281 YLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSP 340
Query: 215 ------------------EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA---- 252
+ A ++ D+ +Q PN+ TY L+ LC+ G V++A
Sbjct: 341 DHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKF 400
Query: 253 -------------------FGLL-----ERME-------SEGIDADTVTFNILISGLRKQ 281
+GL E+ E +GI DTV FN L+ L ++
Sbjct: 401 NQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCRE 460
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G+V E +L++ M G P+ SY ++ G R EA +L+ ++ + P V+Y
Sbjct: 461 GRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTY 520
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+HG C + ++D + ++M+ +G P + + I+
Sbjct: 521 NTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTIL 559
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 139/316 (43%), Gaps = 7/316 (2%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI-KIYGNMAGRISKAI 148
+ +++ ++ L AKR D DI+ R E C D F Y+++ K + N R +A+
Sbjct: 127 DTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCT-PDVFSYSILLKGFCN-EKRAEEAL 184
Query: 149 ETLFDMPS---YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
E L M + P+V T+ V++ L A++ +G++ GV + L+
Sbjct: 185 ELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLI 244
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G G + +L E +P+ Y+ L+ LC+ G EA + + + +GI
Sbjct: 245 HGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIK 304
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ + IL+ G +G + E L+ M G G P+ + + K EA +
Sbjct: 305 PNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHI 364
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVT 384
+M +R+SP+ V+Y LI LC V+D +M+ +G P + ++ +V G T
Sbjct: 365 FDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCT 424
Query: 385 FGKDNRNRVYVTETVD 400
K + E +D
Sbjct: 425 VDKWEKAEELFFEVLD 440
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 7/277 (2%)
Query: 95 TLIINKLAQAKRFDA--IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
TL+ N + + +A + D+M R+ V D YN + + GRI +A + L
Sbjct: 452 TLMCNLCREGRVMEAQRLIDLMLRVGVR-----PDVISYNTLVDGHCLTGRIDEAAKLLD 506
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+ S P T+N +L+ A+ + ++ G+ D N +L GL + G
Sbjct: 507 VIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTG 566
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
A + + N+ TY+ +++GLC+ V+EAF + + S+ + D T N
Sbjct: 567 RFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTAN 626
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
I+I L K G+ E+ M L + G P+ +Y + L+ + E EL M
Sbjct: 627 IMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEEN 686
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+P+ L+ L ++ + L K+ ++ F
Sbjct: 687 GTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNF 723
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 135/333 (40%), Gaps = 23/333 (6%)
Query: 44 DHHAYKLNHKDWLSPT---EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINK 100
DHH + + + E + IF +R ++ +PN Y +I+
Sbjct: 341 DHHIFNIMFCAYAKKAMIDEAMHIFDKMR--------------QQRLSPNIVTYGALIDA 386
Query: 101 LAQAKRFD-AIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKAIETLFDMPSYN 158
L + R D A+ Q I E + D F ++ + +YG + KA E F++
Sbjct: 387 LCKLGRVDDAVLKFNQMID-EGMT--PDIFVFSSL-VYGLCTVDKWEKAEELFFEVLDQG 442
Query: 159 CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
FN ++ L E Q + ++GV D N L+ G C G ++ A
Sbjct: 443 IRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAA 502
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+LD +P+ TY+TL+HG C+ +++A+ L M +G+ D VT+N ++ GL
Sbjct: 503 KLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGL 562
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
+ G+ E +L M N +Y ++ GL EA ++ + + +
Sbjct: 563 FQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDI 622
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +I L ED + + G VP
Sbjct: 623 FTANIMIGALLKGGRKEDAMDLFATISAYGLVP 655
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 136/311 (43%), Gaps = 3/311 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ +++ ++ L +++ E++ + +++ R D F+N + GR+ +A
Sbjct: 409 TPDIFVFSSLVYGLCTVDKWEKAEELFFEV-LDQGIRL-DTVFFNTLMCNLCREGRVMEA 466
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ M P V ++N +++ E + +G++ D N LL G
Sbjct: 467 QRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHG 526
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ ++ A+ + E + P+V TY+T++HGL + G EA L M + +
Sbjct: 527 YCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMN 586
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+NI+I+GL K V+E K+ + K + + ++ LL R +A +L
Sbjct: 587 IYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFA 646
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF-G 386
+ + P +Y + L + +E++D + M + G P M +V + G
Sbjct: 647 TISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRG 706
Query: 387 KDNRNRVYVTE 397
NR Y+++
Sbjct: 707 DINRAGAYLSK 717
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA-DTVTFNILISGLRKQGKVEEGMK 289
P+ TY+ L+ C G ++ F + G DTV F+ L+ GL +V+E
Sbjct: 90 PSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATD 149
Query: 290 -LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE---RMSPSFVSYKKLI 345
LL RM GC P+ SY +L G ++KR EA EL+ M + +P+ V+Y +I
Sbjct: 150 ILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVI 209
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPR-------------MGMWREIV 380
GLC ++V+ V + M+ +G P +G W+E+V
Sbjct: 210 DGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVV 257
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 86/223 (38%), Gaps = 37/223 (16%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P++ Y +++ +A+R D + + + ++ L D YN I GR S+A
Sbjct: 515 PDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLT--PDVVTYNTILHGLFQTGRFSEAK 572
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI----L 204
E M + ++ T+N+++N L E ++ S +++D NI L
Sbjct: 573 ELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGAL 632
Query: 205 LKG-------------------------------LCENGNLEAAFYVLDEFPKQNCEPNV 233
LKG L + G+LE + + PN
Sbjct: 633 LKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNS 692
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
R + L+ L +G++ A L +++ + + T ++LIS
Sbjct: 693 RMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLIS 735
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A + KA+E L M P T+N +L+ S+ E G GVE +
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L+ LC+NG A + D K+ EP++ TY TL+ G KG + E LL+ M
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI D FNILI KQ KV++ M + +M+ G PN Y V+ L
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+A +MI E ++P+ + Y LIHGLC + + ++ +M+ +G
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G KA T +M P V T++ ++ L A+ + + + K GV D
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L G C +G + A L + EPNV TYS+LM+ LC+ G EA + + M
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G++ D T+ L+ G +G + E LL+ M G P+ + ++ +++ +
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV- 380
A + +M ++P+ V Y +I LC V+D ++M+ +G P + ++ ++
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 454
Query: 381 GCVTFGKDNRNRVYVTETVD 400
G T K ++ + E +D
Sbjct: 455 GLCTCDKWDKAEELILEMLD 474
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 140/321 (43%), Gaps = 5/321 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ +L + + P I L + + PN Y+ ++N L + R I
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 328
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYN-CWPSVKTFNLVLNL 172
+ L + +++ Y + + L D+ N P FN+++
Sbjct: 329 FDSMTKRGL-EPDIATYRTLLQGYATKGALVE--MHALLDLMVRNGIQPDHHVFNILICA 385
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
+ + +++ + G+ + C ++ LC++G+++ A ++ + PN
Sbjct: 386 YAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPN 445
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ Y++L+HGLC ++A L+ M GI +T+ FN +I K+G+V E KL +
Sbjct: 446 IIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 505
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M G P+ +Y ++ G + EA +L+ M+ + P V+Y LI+G C
Sbjct: 506 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 565
Query: 353 LVEDVDWVLKKMVQQGFVPRM 373
++D + K+MV G P +
Sbjct: 566 RMDDALALFKEMVSSGVSPNI 586
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 125/280 (44%), Gaps = 14/280 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM--- 140
R P+ ++ ++I A+ ++ D + +++ G NV+ YG +
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR-------QHGLNPNVV-CYGTVIDV 420
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+G + A+ M P++ + +++ L + + + + + G+ ++
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N ++ C+ G + + + D + +P++ TY+TL+ G C G ++EA LL
Sbjct: 481 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA 540
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M S G+ D VT+ LI+G + ++++ + L + M G PN +Y +L GL +
Sbjct: 541 SMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTR 600
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
R AKEL + +Y ++HGLC L ++
Sbjct: 601 RTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 138/316 (43%), Gaps = 26/316 (8%)
Query: 71 PISVISVLNQYSKRK--DYNPNEALYTLIINKLAQAKRFD----AIEDIMQRIKVEKLCR 124
P + +S N+ ++ P Y ++I +A R D A+ +++++
Sbjct: 70 PAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKK-------- 121
Query: 125 FSDGFFYNVIKIYGNMAG-----RISKAIE-TLFDMPSYNCWPSVKTFNLVLNLLVS--- 175
GF + I + G R S A++ L M C P V ++N +L L
Sbjct: 122 ---GFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENR 178
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
++ E+ + G D N +L G + G+ + A+ E + P+V T
Sbjct: 179 SQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVT 238
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
YS+++ LC+ +++A +L M G+ D +T+N ++ G G+ +E + L++M+
Sbjct: 239 YSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR 298
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
G PN +Y ++ L R EA+++ M + P +Y+ L+ G + +
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALV 358
Query: 356 DVDWVLKKMVQQGFVP 371
++ +L MV+ G P
Sbjct: 359 EMHALLDLMVRNGIQP 374
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 4/244 (1%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS-AAKLGVEIDAC 199
AGR+ L ++ TF +L L + K + I +LG D
Sbjct: 105 AGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVF 164
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQ---NCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
N LLKGLC+ + A +L P+V +Y+T+++G ++G+ ++A+
Sbjct: 165 SYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTY 224
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M GI D VT++ +I+ L K +++ M++L M G P+ +Y +L+G
Sbjct: 225 HEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 284
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ EA + +M + + P+ V+Y L++ LC + + M ++G P + +
Sbjct: 285 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATY 344
Query: 377 REIV 380
R ++
Sbjct: 345 RTLL 348
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 4/294 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN +YT +I+ L ++D E+++ + +C + F+N I GR+ ++
Sbjct: 443 TPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL--NTIFFNSIIDSHCKEGRVIES 500
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E LFD M P + T+N +++ A E + S +GV+ D L+
Sbjct: 501 -EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C ++ A + E PN+ TY+ ++ GL A L + G
Sbjct: 560 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 619
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T+NI++ GL K +E +++ + + + ++ ++ LL R EAK+L
Sbjct: 620 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLF 679
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P +Y + L Q +E++D + M + G M IV
Sbjct: 680 AAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIV 733
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P V TY+ L+ C G ++ F L + +G D +TF L+ GL + + M +
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 291 -LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER---MSPSFVSYKKLIH 346
L RM GC P+ SY +L GL D+ R EA EL+ M +R P VSY +++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
G + + +M+ +G +P + + I+ +
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAAL 246
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A+ +M S P++ T+N++L L + + +Y S K G +++ N
Sbjct: 566 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I+L GLC+N + A + + + RT++ ++ L + G ++EA L +
Sbjct: 626 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSAN 685
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D T++++ L +QG +EE L M+ GC +S ++ LL + A
Sbjct: 686 GLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A + KA+E L M P T+N +L+ S+ E G GVE +
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L+ LC+NG A + D K+ EP++ TY TL+ G KG + E LL+ M
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI D FNILI KQ KV++ M + +M+ G PN Y V+ L
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+A +MI E ++P+ + Y LIHGLC + + ++ +M+ +G
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G KA T +M P V T++ ++ L A+ + + + K GV D
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L G C +G + A L + EPNV TYS+LM+ LC+ G EA + + M
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G++ D T+ L+ G +G + E LL+ M G P+ + ++ +++ +
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV- 380
A + +M ++P+ V Y +I LC V+D ++M+ +G P + ++ ++
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 454
Query: 381 GCVTFGKDNRNRVYVTETVD 400
G T K ++ + E +D
Sbjct: 455 GLCTCDKWDKAEELILEMLD 474
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 143/328 (43%), Gaps = 5/328 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ +L + + P I L + + PN Y+ ++N L + R I
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 328
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYN-CWPSVKTFNLVLNL 172
+ L + +++ Y + + L D+ N P FN+++
Sbjct: 329 FDSMTKRGL-EPDIATYRTLLQGYATKGALVE--MHALLDLMVRNGIQPDHHVFNILICA 385
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
+ + +++ + G+ + C ++ LC++G+++ A ++ + PN
Sbjct: 386 YAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPN 445
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ Y++L+HGLC ++A L+ M GI +T+ FN +I K+G+V E KL +
Sbjct: 446 IIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 505
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M G P+ +Y ++ G + EA +L+ M+ + P V+Y LI+G C
Sbjct: 506 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 565
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++D + K+MV G P + + I+
Sbjct: 566 RMDDALALFKEMVSSGVSPNIITYNIIL 593
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 125/279 (44%), Gaps = 14/279 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM--- 140
R P+ ++ ++I A+ ++ D + +++ G NV+ YG +
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR-------QHGLNPNVV-CYGTVIDV 420
Query: 141 ---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+G + A+ M P++ + +++ L + + + + + G+ ++
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N ++ C+ G + + + D + +P++ TY+TL+ G C G ++EA LL
Sbjct: 481 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA 540
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M S G+ D VT+ LI+G + ++++ + L + M G PN +Y +L GL +
Sbjct: 541 SMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTR 600
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
R AKEL + +Y ++HGLC L ++
Sbjct: 601 RTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDE 639
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 138/316 (43%), Gaps = 26/316 (8%)
Query: 71 PISVISVLNQYSKRK--DYNPNEALYTLIINKLAQAKRFD----AIEDIMQRIKVEKLCR 124
P + +S N+ ++ P Y ++I +A R D A+ +++++
Sbjct: 70 PAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKK-------- 121
Query: 125 FSDGFFYNVIKIYGNMAG-----RISKAIE-TLFDMPSYNCWPSVKTFNLVLNLLVS--- 175
GF + I + G R S A++ L M C P V ++N +L L
Sbjct: 122 ---GFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENR 178
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
++ E+ + G D N +L G + G+ + A+ E + P+V T
Sbjct: 179 SQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVT 238
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
YS+++ LC+ +++A +L M G+ D +T+N ++ G G+ +E + L++M+
Sbjct: 239 YSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR 298
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
G PN +Y ++ L R EA+++ M + P +Y+ L+ G + +
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALV 358
Query: 356 DVDWVLKKMVQQGFVP 371
++ +L MV+ G P
Sbjct: 359 EMHALLDLMVRNGIQP 374
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 4/244 (1%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS-AAKLGVEIDAC 199
AGR+ L ++ TF +L L + K + I +LG D
Sbjct: 105 AGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVF 164
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQ---NCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
N LLKGLC+ + A +L P+V +Y+T+++G ++G+ ++A+
Sbjct: 165 SYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTY 224
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M GI D VT++ +I+ L K +++ M++L M G P+ +Y +L+G
Sbjct: 225 HEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 284
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ EA + +M + + P+ V+Y L++ LC + + M ++G P + +
Sbjct: 285 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATY 344
Query: 377 REIV 380
R ++
Sbjct: 345 RTLL 348
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 4/294 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN +YT +I+ L ++D E+++ + +C + F+N I GR+ ++
Sbjct: 443 TPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL--NTIFFNSIIDSHCKEGRVIES 500
Query: 148 IETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E LFD M P + T+N +++ A E + S +GV+ D L+
Sbjct: 501 -EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C ++ A + E PN+ TY+ ++ GL A L + G
Sbjct: 560 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 619
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T+NI++ GL K +E +++ + + + ++ ++ LL R EAK+L
Sbjct: 620 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLF 679
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P +Y + L Q +E++D + M + G M IV
Sbjct: 680 AAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIV 733
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P V TY+ L+ C G ++ F L + +G D +TF L+ GL + + M +
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 291 -LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER---MSPSFVSYKKLIH 346
L RM GC P+ SY +L GL D+ R EA EL+ M +R P VSY +++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
G + + +M+ +G +P + + I+ +
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAAL 246
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A+ +M S P++ T+N++L L + + +Y S K G +++ N
Sbjct: 566 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I+L GLC+N + A + + + RT++ ++ L + G ++EA L +
Sbjct: 626 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSAN 685
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D T++++ L +QG +EE L M+ GC +S ++ LL + A
Sbjct: 686 GLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 143/297 (48%), Gaps = 12/297 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV--IKIYGNMAGRISK 146
P+ ++ + +A+ K+F+ + D +++++ +G +N+ + I N R K
Sbjct: 76 PSLVDFSRFFSAIARTKQFNLVLDFCKQLEL-------NGIAHNIYTLNIMINCFCRCCK 128
Query: 147 ---AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
A L + P TFN ++ L E + + G + D N
Sbjct: 129 TCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS 188
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G+C +G+ A +L + ++N + +V TYST++ LC G ++ A L + ME++G
Sbjct: 189 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 248
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I + VT+N L+ GL K GK +G LL+ M + PN ++ +L + + + EA
Sbjct: 249 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 308
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL MI +SP+ ++Y L+ G C Q + + + +L MV+ P + + ++
Sbjct: 309 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 365
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 126/253 (49%)
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
KV KL D +N + + G++S+A+ + M C P V T+N ++N + +
Sbjct: 138 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 197
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
+ + V+ D + ++ LC +G ++AA + E + + +V TY+
Sbjct: 198 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 257
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
+L+ GLC+ G + LL+ M S I + +TFN+L+ K+GK++E +L + M +
Sbjct: 258 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 317
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G PN +Y ++ G + R EA ++ M+ + SP V++ LI G C K V+D
Sbjct: 318 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 377
Query: 358 DWVLKKMVQQGFV 370
V + + ++G V
Sbjct: 378 MKVFRNISKRGLV 390
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ II+ L + DA + + ++ + + S YN + AG+ + L D
Sbjct: 221 YSTIIDSLCRDGCIDAAISLFKEMETKGI--KSSVVTYNSLVRGLCKAGKWNDGALLLKD 278
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S P+V TFN++L++ V E +Y G+ + N L+ G C
Sbjct: 279 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 338
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L A +LD + C P++ T+++L+ G C V++ + + G+ A+ VT++I
Sbjct: 339 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 398
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ G + GK++ +L + M G P+ +Y +L GL D + +A E+ + +
Sbjct: 399 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 458
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
M V Y +I G+C VED W L
Sbjct: 459 MDLGIVMYTTIIEGMCKGGKVEDA-WNL 485
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN + M R+S+A L M C P + TF ++ K + ++ + +
Sbjct: 326 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 385
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
K G+ +A +IL++G C++G ++ A + E P+V TY L+ GLC+ G +E
Sbjct: 386 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 445
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A + E ++ +D V + +I G+ K GKVE+ L + KG PN +Y ++
Sbjct: 446 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 505
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
GL K EA L+ +M + +P+ +Y LI
Sbjct: 506 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 542
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +P+ +T +I KR D + + I L ++ Y+++ +G+
Sbjct: 351 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL--VANAVTYSILVQGFCQSGK 408
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I A E +M S+ P V T+ ++L+ L + I+ K +++
Sbjct: 409 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 468
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++G+C+ G +E A+ + P + +PNV TY+ ++ GLC+KG++ EA LL +ME +G
Sbjct: 469 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 528
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ T+N LI + G + KL+E MK G +++S + V+ LL
Sbjct: 529 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 579
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 2/261 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y +++ R +++ + V C F ++IK Y M R+
Sbjct: 320 SPNIITYNTLMDGYCMQNRLSEANNMLD-LMVRNKCSPDIVTFTSLIKGYC-MVKRVDDG 377
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ ++ + T+++++ + + ++ GV D ILL G
Sbjct: 378 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 437
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+NG LE A + ++ K + + Y+T++ G+C+ G VE+A+ L + +G+ +
Sbjct: 438 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 497
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+ ++ISGL K+G + E LL +M+ G PN +Y ++ L + +L+
Sbjct: 498 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 557
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M S S K +I L
Sbjct: 558 EMKSCGFSADASSIKMVIDML 578
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 129/286 (45%), Gaps = 4/286 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ + +I L + ++ R+ VE C+ D YN I +G S
Sbjct: 144 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM-VENGCQ-PDVVTYNSIVNGICRSGDTSL 201
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A++ L M N V T++ +++ L ++ G++ N L++
Sbjct: 202 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 261
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ G +L + + PNV T++ L+ ++G ++EA L + M + GI
Sbjct: 262 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 321
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ +T+N L+ G Q ++ E +L+ M C P+ ++ ++ G KR + + V
Sbjct: 322 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK-V 380
Query: 327 GRMICER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
R I +R + + V+Y L+ G C ++ + + ++MV G +P
Sbjct: 381 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 426
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N+ T + +++ C A+ +L ++ G + DT TFN LI GL +GKV E + L+
Sbjct: 112 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 171
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+RM GC P+ +Y ++ G+ A +L+ +M + +Y +I LC
Sbjct: 172 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 231
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETV 399
++ + K+M +G + + +V G GK N + + + V
Sbjct: 232 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 280
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 73/175 (41%), Gaps = 6/175 (3%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A + E + P++ +S + +++E GI + T NI+
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I+ + K +L ++ G P++ ++ ++ GL + + EA LV RM+
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV------GCV 383
P V+Y +++G+C +L+KM ++ + + I+ GC+
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 234
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 173/365 (47%), Gaps = 17/365 (4%)
Query: 10 NHRQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLR 69
+HR +++SL S + R + PS +H H + + + VL LR
Sbjct: 40 SHRLRLLRSLQS---VPADRLLSHPLPSTAHACLAAHLLARD-RLYAHSRRVLSRLVALR 95
Query: 70 DPISVISVLNQYSKRK-DYNPNEALYTLIINKL----AQAKRFDAIEDIMQRIKVEKLCR 124
P S+++ + P + +++ L A D + R++ ++
Sbjct: 96 RPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPP 155
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
+ + ++++ + +GR+ + LF+ +P+ P+V TFN+V++ L E +
Sbjct: 156 NTRTCNHILLRLARDRSGRL---VRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEAR 208
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+++ ++G D N L+ G + G L+ +++E + C+ +V TY+ L++
Sbjct: 209 SLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCF 268
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C+ G +E A+G M+ EG+ A+ VTF+ + K+G V E MKL +M+ +G N
Sbjct: 269 CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNE 328
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y ++ G R +A L+ M+ + + + V+Y L+ GLC ++ V + + VL+
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388
Query: 364 MVQQG 368
M + G
Sbjct: 389 MEKAG 393
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 134/293 (45%), Gaps = 4/293 (1%)
Query: 81 YSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG 138
+S+ K+ P+ + +I+ + D +E +++ ++ C+ +D YN +
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG-CK-ADVVTYNALINCF 268
Query: 139 NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
GR+ A M +V TF+ ++ L E ++ G+ ++
Sbjct: 269 CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNE 328
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
L+ G C+ G L+ A +LDE +Q NV TY+ L+ GLC++ V EA +L
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
ME G+ A+ + + LI G E+ + LL MK KG + + Y ++ GL + +
Sbjct: 389 MEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHK 448
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EAK L+ +M + P+++ Y ++ V + +L+K++ GF P
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP 501
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 134/298 (44%), Gaps = 4/298 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ N YT++++ L + ++ ED+++ + EK ++ Y + I+G+ +
Sbjct: 356 RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM--EKAGVRANELLYTTL-IHGHFMNK 412
Query: 144 IS-KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
S KA+ L +M + + + ++ L + E + + T + G+E +
Sbjct: 413 NSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYT 472
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++ ++G + A +L + +PNV TY L+ GLC+ G+++EA +M
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDL 532
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+D + + L+ GL K G + E ++L M KG + Y +L G L + +A
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L +MI + Y I G CN ++ + V +M+ G P ++ ++
Sbjct: 593 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 117/252 (46%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F +N++ + G +++A M C P V TFN +++ E++ +
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEE 248
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ G + D N L+ C+ G +E A+ ++ NV T+ST + C++G
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V EA L +M G+ + T+ LI G K G++++ + LL+ M +G N +Y
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ GL +++ EA++++ M + + + Y LIHG K E +L +M +G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428
Query: 369 FVPRMGMWREIV 380
+ ++ ++
Sbjct: 429 LELDISLYGALI 440
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGR+ AI L +M +V T+ ++++ L + E + + K GV +
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G N N E A +L E + E ++ Y L+ GLC ++EA LL +M+
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G++ + + + ++ K GKV E + +L+++ G PN +Y ++ GL
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSID 520
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
EA +M + P+ +Y L+ GLC + + + +MV +G
Sbjct: 521 EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGM 569
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-----AGR 143
PN +YT +++ ++ + ++Q+I GF NVI + AG
Sbjct: 466 PNYIIYTTMMDACFKSGKVPEAIAMLQKI-------LDSGFQPNVITYCALIDGLCKAGS 518
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I +AI M P+V+ + +++ L E ++ G+ +D
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL G + GNL AF + + + ++ Y+ + G C + EA + M G
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHG 638
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
I D +N LIS +K G +EE + L + M+
Sbjct: 639 IAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 5/267 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-A 141
K K ++P+ Y ++I L A + ++ E F+ I I +
Sbjct: 116 KNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKEN---FNPTVVTYTILIEATLLQ 172
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G I +AI+ L +M N P V +N ++ + + + I + ++K G +D
Sbjct: 173 GGIDEAIKLLDEMFEINLQPDVFPYNSIIXMCREGYVDRAFEVISSISSK-GYALDVITY 231
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NILL+ L G EA F ++ + + CE NV TYS L+ LC G VEE GLL+ M+
Sbjct: 232 NILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKK 291
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G++ D ++ LI+ L K+G+V+ +++L+ M GC P+ +Y +L L +KR E
Sbjct: 292 KGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADE 351
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGL 348
A + ++ SP+ SY + L
Sbjct: 352 ALSIFEKLGEVGCSPNASSYNTVFSAL 378
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 8/283 (2%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN++ G+ E + DM + C +V T++++++ L E G+
Sbjct: 227 DVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLL 286
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
K G+E D C + L+ LC+ G ++ A VLD C P++ Y+T++ LC++
Sbjct: 287 KDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQ 346
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG-KVEEGMKLLERMKGKGCYPNSAS 305
+EA + E++ G + ++N + S L G KV +LE + P+ +
Sbjct: 347 KRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDXVD--PDVIA 404
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICE--RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
Y ++ L EA EL+ M E PS VSY ++ GLC V D VL
Sbjct: 405 YNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAA 464
Query: 364 MVQQGFVPRMGMWREIVGCVTFG---KDNRNRVYVTETVDSLA 403
MV +G +P + ++ + FG D R+ +D+++
Sbjct: 465 MVDKGCLPNETTYTFLIEGIGFGGWLNDARDLATTLVNMDAIS 507
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 1/240 (0%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I A + L M + P + T+N+++ L S + K I
Sbjct: 105 IPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTI 164
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++ G ++ A +LDE + N +P+V Y++++ +C +G V+ AF ++ + S+G
Sbjct: 165 LIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSKG 223
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D +T+NIL+ L QGK E G +L+ M KGC N +Y ++ L + E
Sbjct: 224 YALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGV 283
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
L+ M + + P Y LI LC + V+ VL M+ G VP + + I+ C+
Sbjct: 284 GLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACL 343
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 38/237 (16%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N Y+++I+ L + + + +++ +K + L DG+ Y+ + GR+ AIE
Sbjct: 262 NVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGL--EPDGYCYDPLIAVLCKEGRVDLAIE 319
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG---------------- 193
L M S C P + +N +L L K E I+ ++G
Sbjct: 320 VLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALG 379
Query: 194 ------------------VEIDACCLNILLKGLCENGNLEAAFYVLD--EFPKQNCEPNV 233
V+ D N L+ LC +G ++ A +L E C+P+V
Sbjct: 380 SSGHKVRALGMILEMLDXVDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSV 439
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
+Y+ ++ GLC G V +A +L M +G + T+ LI G+ G + + L
Sbjct: 440 VSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDL 496
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ A+ +L+RM+++G D VT+NILI L +G + ++ ++ + P +Y
Sbjct: 104 SIPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYT 163
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ L + EA +L+ M + P Y +I +C + V+ V+ + +
Sbjct: 164 ILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSK 222
Query: 368 GF 369
G+
Sbjct: 223 GY 224
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 60 SGFLRDAIECYXLTRKHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYF 119
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+ +Y+TLM+G G ++E F L M
Sbjct: 120 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAML 179
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 180 ASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 239
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + + P ++Y LI+GLC + ++ ++ M ++G P + ++
Sbjct: 240 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLI 299
Query: 381 -GCVTFG 386
GC G
Sbjct: 300 DGCCKEG 306
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PS ++N ++N + + E + +
Sbjct: 118 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKS 176
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 177 AMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNG 236
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 237 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYT 296
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E R+I E + V Y LI GLC + D + +L++M+
Sbjct: 297 TLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSV 356
Query: 368 GFVPRMGMWREIV 380
G P G + I+
Sbjct: 357 GLNPDTGTYTMII 369
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 110/211 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+NG ++ A +
Sbjct: 185 PDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 244
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G K
Sbjct: 245 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCK 304
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G + + +R+ + + Y ++ GL + R +A++++ M+ ++P +
Sbjct: 305 EGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGT 364
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 365 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 395
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 117/260 (45%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D +++ + V+ L +G + + GR+ A
Sbjct: 184 QPDVYTYSVLINGLCKESKMDDADELFDEMLVKGL--VPNGVTFTTLIDGHCKNGRVDLA 241
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 242 MEIYKQMLSQSLLPDLITYN-----------------------------------TLIYG 266
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G+L+ A ++D+ ++ +P+ TY+TL+ G C++G + AF +R+ E I D
Sbjct: 267 LCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLD 326
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G P++ +Y ++ K + +L+
Sbjct: 327 DVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLK 386
Query: 328 RMICERMSPSFVSYKKLIHG 347
M + PS V+Y L++G
Sbjct: 387 EMQRDGHVPSVVTYNVLMNG 406
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 132/281 (46%), Gaps = 2/281 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +Y II+ + + K + D+ + + + D Y+ + + G++ AI
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGIS--PDVVTYSALISGFCILGKLKDAI 280
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M N P V TFN+++N E + ++ K G++ + N L+ G
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C + A + + + P++++YS +++G C+ +EA L + M + I D
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT++ LI GL K G++ ++L+++M +G PN +Y +L L + +A L+ +
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTK 460
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ P +Y LI GLC +ED V + ++ +G+
Sbjct: 461 FKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGY 501
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 2/235 (0%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
N P FN +L LV +K Y + + G++ + NIL+ C+ G + A
Sbjct: 80 NTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFA 139
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
F V + K P+ T++TL GLC KG +++AF +++ + G D +++ LI G
Sbjct: 140 FSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHG 199
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L K G+ + LL+R+ G PN Y ++ + K EA +L M+ + +SP
Sbjct: 200 LCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPD 259
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
V+Y LI G C ++D + KM+ + P + + +V F KD + +
Sbjct: 260 VVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVN--AFCKDGKMK 312
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 150/308 (48%), Gaps = 5/308 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +P+ Y+ +I+ + D+ ++ +E + D + +N++ G++
Sbjct: 254 KGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIK--PDVYTFNILVNAFCKDGKM 311
Query: 145 SKAIETLFDMP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +T+FDM P+ T+N +++ K + + I+ + A+ GV D +I
Sbjct: 312 KEG-KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G C+ + A + E ++N P+V TYS+L+ GL + G + A L+++M G
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + T+N ++ L K +V++ + LL + K KG P+ ++Y ++ GL + +A+
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDAR 490
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
++ ++ + + +Y +I G C + L + +L KM G +P + EI+
Sbjct: 491 KVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY-EIIILS 549
Query: 384 TFGKDNRN 391
F KD +
Sbjct: 550 LFKKDEND 557
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 178 LYGEIQGIYTSAAK---LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
L G+IQ + K LG D L+ GLC+ G AA +L +PNV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y+T++ +C+ V EAF L M S+GI D VT++ LISG GK+++ + L +M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+ P+ ++ ++ + E K + M+ + + P+FV+Y L+ G C K V
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
+ M Q G P + + ++
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMI 372
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
V+ + N ++ +C+ + AF + E + P+V TYS L+ G C G +++A
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAI 280
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L +M E I D TFNIL++ K GK++EG + + M +G PN +Y ++ G
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
K +AK + M ++P SY +I+G C K ++ + K+M ++ +P +
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 374 GMWREIVGCVTFGKDNRNRV-YVTETVDSL 402
+ ++ G R+ Y + VD +
Sbjct: 401 VTYSSLID----GLSKSGRISYALQLVDQM 426
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 118/259 (45%), Gaps = 7/259 (2%)
Query: 128 GFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
GF ++ I YG + G A++ L + P+V +N +++ + KL E
Sbjct: 185 GFHFDQIS-YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
+++ G+ D + L+ G C G L+ A + ++ +N +P+V T++ L++
Sbjct: 244 AFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVN 303
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
C+ G ++E + + M +GI + VT+N L+ G +V + + M G P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ SY ++ G K+F EA L M + + P V+Y LI GL + ++
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423
Query: 362 KKMVQQGFVPRMGMWREIV 380
+M +G P + + I+
Sbjct: 424 DQMHDRGVPPNICTYNSIL 442
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ +A+ +M N P V T++ +++ L + + GV + C N
Sbjct: 380 KFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYN 439
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+L LC+ ++ A +L +F + +P++ TYS L+ GLC+ G +E+A + E + +
Sbjct: 440 SILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVK 499
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + D + I+I G +G E + LL +M+ GC P++ +Y+ ++ L K A
Sbjct: 500 GYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMA 559
Query: 323 KELVGRMICERMSPSF 338
++L+ MI + +F
Sbjct: 560 EKLLREMIARGLPLNF 575
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 2/211 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NP+ Y+++IN + K+FD ++ + + + + D Y+ + + +GRIS A
Sbjct: 362 NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI--IPDVVTYSSLIDGLSKSGRISYA 419
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ + M P++ T+N +L+ L + + T G + D +IL+KG
Sbjct: 420 LQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKG 479
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC++G LE A V ++ + +V Y+ ++ G C +G EA LL +ME G D
Sbjct: 480 LCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
T+ I+I L K+ + + KLL M +G
Sbjct: 540 AKTYEIIILSLFKKDENDMAEKLLREMIARG 570
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 114/229 (49%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ ++KA M P ++++++++N K + E ++ + + D
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVV 401
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+ L+ GL ++G + A ++D+ + PN+ TY++++ LC+ V++A LL +
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKF 461
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ +G D T++ILI GL + GK+E+ K+ E + KG + +Y ++ G + F
Sbjct: 462 KDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLF 521
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
EA L+ +M P +Y+ +I L + + + +L++M+ +G
Sbjct: 522 NEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 123/251 (49%), Gaps = 2/251 (0%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+ NVIK + + G + K L +M C P++ T+N + L E +
Sbjct: 245 YTNVIKAHCKV-GDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLM 302
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ G+ D +L+ G C+ + A + + P PN TY+ L+ G ++GN+
Sbjct: 303 MEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNI 362
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EEA + + M + G+ + VT+N +I G+ K G++ + M L M G P++ +Y +
Sbjct: 363 EEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLL 422
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ G L +A EL+ M +++PS +Y LI GLC+ ++ + VL +M++ G
Sbjct: 423 IDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGV 482
Query: 370 VPRMGMWREIV 380
P + M+ ++
Sbjct: 483 KPNVFMYGTLI 493
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 3/285 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +I A K D I+ M ++EK C+ + F YN G + +A+
Sbjct: 240 PDVYTYTNVIK--AHCKVGDVIKGKMVLSEMEKECK-PNLFTYNAFIGGLCQTGAVDEAL 296
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M P T+ L+++ K E + I+ S G+ + L+ G
Sbjct: 297 EVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGF 356
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ GN+E A + DE + + NV TY+ ++ G+ + G + +A L M G++ DT
Sbjct: 357 IKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDT 416
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N+LI G K + + +LL MK + P+ +Y ++ GL +A E++ +
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
MI + P+ Y LI + E +LK M+ G +P +
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDL 521
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 136/327 (41%), Gaps = 46/327 (14%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN----VIKIYGN 139
K PN Y IN +++ E + + S G N I I G+
Sbjct: 549 EKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDM-------LSSGIVPNNVIYTILIKGH 601
Query: 140 M-AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
G +A+ T M P ++ ++ +++ L E G++ K GV D
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV 661
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N L+ G C+ G++E A + DE PN+ Y+TL++GLC+ G V +A L +
Sbjct: 662 FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDE 721
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG------ 312
+E + + D VT++ +I G K G + E KL + M KG P+ Y ++ G
Sbjct: 722 IEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN 781
Query: 313 ------------------------LLDK----KRFPEAKELVGRMICERMSPSFVSYKKL 344
L+D + EA+EL M+ ++++P+ V+Y L
Sbjct: 782 LEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTIL 841
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I +++E+ + + M + +P
Sbjct: 842 IDAYGKAEMMEEAEQLFLDMETRNIIP 868
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 147/319 (46%), Gaps = 6/319 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + T V+K + D I VL++ K+ PN Y I L Q D ++
Sbjct: 241 DVYTYTNVIKAHCKVGDVIKGKMVLSEM--EKECKPNLFTYNAFIGGLCQTGAVDEALEV 298
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNL 172
+++ +EK DG Y ++ + G + SK + +F+ MPS P+ T+ +++
Sbjct: 299 -KKLMMEKGLG-PDGHTYTLL-VDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDG 355
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
+ E I G++++ N ++ G+ + G + A + +E EP+
Sbjct: 356 FIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPD 415
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TY+ L+ G + ++ +A LL M++ + T+++LISGL +++ ++L+
Sbjct: 416 TWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLD 475
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+M G PN Y ++ + + R+ A EL+ MI + P Y LI GLC K
Sbjct: 476 QMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAK 535
Query: 353 LVEDVDWVLKKMVQQGFVP 371
VE+ +L M ++G P
Sbjct: 536 KVEEAKMLLVDMGEKGIKP 554
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 130/295 (44%), Gaps = 16/295 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC--RFS-----DGFFYNVIKI 136
K P+ YTL+++ + KR + I + + L RF+ DGF
Sbjct: 304 EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE---- 359
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G I +A+ +M + +V T+N ++ + A + ++ G+E
Sbjct: 360 -----GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEP 414
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N+L+ G ++ ++ A +L E + P+ TYS L+ GLC ++++A +L
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVL 474
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
++M G+ + + LI ++ + E ++LL+ M G P+ Y ++ GL
Sbjct: 475 DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRA 534
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K+ EAK L+ M + + P+ +Y I+ ++ + K M+ G VP
Sbjct: 535 KKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 128/298 (42%), Gaps = 2/298 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + P+ Y+++I+ L + +++ ++ + + + + +IK Y
Sbjct: 443 KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM-IRNGVKPNVFMYGTLIKAYVQ-ES 500
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R AIE L M + P + +N ++ L AK E + + + G++ +A
Sbjct: 501 RYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYG 560
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+ ++G ++ A + PN Y+ L+ G C+ GN EA + M +
Sbjct: 561 AFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEK 620
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D ++ +I L K GK +E M + + G P+ Y ++ G + +A
Sbjct: 621 GLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKA 680
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+L M+ ++P+ V Y LI+GLC V + ++ ++ VP + + I+
Sbjct: 681 SQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTII 738
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 134/334 (40%), Gaps = 49/334 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NPN YT +I+ + IE+ + RIK E + R G NV+ Y M G I+KA
Sbjct: 343 NPNRFTYTALIDGFIKEGN---IEEAL-RIKDEMITR---GLKLNVVT-YNAMIGGIAKA 394
Query: 148 IETLFDMPSYN------CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
E M +N P T+NL+++ + + + + +
Sbjct: 395 GEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTY 454
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH-------------------- 241
++L+ GLC + +L+ A VLD+ + +PNV Y TL+
Sbjct: 455 SVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA 514
Query: 242 ---------------GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
GLC VEEA LL M +GI + T+ I+ K G+++
Sbjct: 515 NGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQV 574
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+ + M G PN+ Y ++ G D EA M+ + + P +Y +IH
Sbjct: 575 AERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIH 634
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L ++ V K ++ G VP + ++ ++
Sbjct: 635 SLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLI 668
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 102/223 (45%), Gaps = 1/223 (0%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
++ F++ ++ E ++ ++ G C N L++ L + + + V
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
+ P+V TY+ ++ C+ G+V + +L ME E + T+N I GL +
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQT 289
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G V+E +++ + M KG P+ +Y ++ G +KR EAK + M ++P+ +Y
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
LI G + +E+ + +M+ +G + + ++G +
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIA 392
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 121/289 (41%), Gaps = 3/289 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ KD P+ Y+ II+ ++ + + + + DG+ Y ++ G
Sbjct: 723 EEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGIS--PDGYIYCILIDGCGKEG 780
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ KA+ +LF S+ FN +++ E + ++ + +
Sbjct: 781 NLEKAL-SLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYT 839
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ + +E A + + +N PN TY++L+ + GN + L + ME+
Sbjct: 840 ILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR 899
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI D + + ++ S K+GK E +KLL + +G + +++ L +K+
Sbjct: 900 GIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTV 959
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EL+ M E +S S + L+ G ++ VL M + G+VP
Sbjct: 960 LELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 1008
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 7/179 (3%)
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG---EIQGIYTSA 189
+I YG A + +A + DM + N P+ T+ +LL+S G ++ ++
Sbjct: 841 LIDAYGK-AEMMEEAEQLFLDMETRNIIPNTLTYT---SLLLSYNQIGNRFKMISLFKDM 896
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G+ DA ++ C+ G A +L++ + + + L+ LC++ +
Sbjct: 897 EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQI 956
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
LL M E + + T N L+ G K G +E K+L M+ G P S S +
Sbjct: 957 STVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTD 1015
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 143/297 (48%), Gaps = 12/297 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV--IKIYGNMAGRISK 146
P+ ++ + +A+ K+F+ + D +++++ +G +N+ + I N R K
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLEL-------NGIAHNIYTLNIMINCFCRCCK 138
Query: 147 ---AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
A L + P TFN ++ L E + + G + D N
Sbjct: 139 TCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS 198
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G+C +G+ A +L + ++N + +V TYST++ LC G ++ A L + ME++G
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 258
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I + VT+N L+ GL K GK +G LL+ M + PN ++ +L + + + EA
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 318
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL MI +SP+ ++Y L+ G C Q + + + +L MV+ P + + ++
Sbjct: 319 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 126/254 (49%)
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
KV KL D +N + + G++S+A+ + M C P V T+N ++N + +
Sbjct: 148 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
+ + V+ D + ++ LC +G ++AA + E + + +V TY+
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
+L+ GLC+ G + LL+ M S I + +TFN+L+ K+GK++E +L + M +
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G PN +Y ++ G + R EA ++ M+ + SP V++ LI G C K V+D
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 358 DWVLKKMVQQGFVP 371
V + + ++G V
Sbjct: 388 MKVFRNISKRGLVA 401
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ II+ L + DA + + ++ + + S YN + AG+ + L D
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGI--KSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S P+V TFN++L++ V E +Y G+ + N L+ G C
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L A +LD + C P++ T+++L+ G C V++ + + G+ A+ VT++I
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ G + GK++ +L + M G P+ +Y +L GL D + +A E+ + +
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
M V Y +I G+C VED W L
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDA-WNL 495
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN + M R+S+A L M C P + TF ++ K + ++ + +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
K G+ +A +IL++G C++G ++ A + E P+V TY L+ GLC+ G +E
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A + E ++ +D V + +I G+ K GKVE+ L + KG PN +Y ++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
GL K EA L+ +M + +P+ +Y LI
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +P+ +T +I KR D + + I L ++ Y+++ +G+
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL--VANAVTYSILVQGFCQSGK 418
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I A E +M S+ P V T+ ++L+ L + I+ K +++
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++G+C+ G +E A+ + P + +PNV TY+ ++ GLC+KG++ EA LL +ME +G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ T+N LI + G + KL+E MK G +++S + V+ LL
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 2/261 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y +++ R +++ + V C F ++IK Y M R+
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLD-LMVRNKCSPDIVTFTSLIKGYC-MVKRVDDG 387
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ ++ + T+++++ + + ++ GV D ILL G
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+NG LE A + ++ K + + Y+T++ G+C+ G VE+A+ L + +G+ +
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+ ++ISGL K+G + E LL +M+ G PN +Y ++ L + +L+
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M S S K +I L
Sbjct: 568 EMKSCGFSADASSIKMVIDML 588
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 129/286 (45%), Gaps = 4/286 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ + +I L + ++ R+ VE C+ D YN I +G S
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM-VENGCQ-PDVVTYNSIVNGICRSGDTSL 211
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A++ L M N V T++ +++ L ++ G++ N L++
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ G +L + + PNV T++ L+ ++G ++EA L + M + GI
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ +T+N L+ G Q ++ E +L+ M C P+ ++ ++ G KR + + V
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK-V 390
Query: 327 GRMICER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
R I +R + + V+Y L+ G C ++ + + ++MV G +P
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N+ T + +++ C A+ +L ++ G + DT TFN LI GL +GKV E + L+
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+RM GC P+ +Y ++ G+ A +L+ +M + +Y +I LC
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETV 399
++ + K+M +G + + +V G GK N + + + V
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 59/135 (43%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A + E + P++ +S + +++E GI + T NI+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I+ + K +L ++ G P++ ++ ++ GL + + EA LV RM+
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 335 SPSFVSYKKLIHGLC 349
P V+Y +++G+C
Sbjct: 190 QPDVVTYNSIVNGIC 204
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 173/365 (47%), Gaps = 17/365 (4%)
Query: 10 NHRQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLR 69
+HR +++SL S + R + PS +H H + + + VL LR
Sbjct: 40 SHRLRLLRSLQS---VPADRLLSHPLPSTAHACLAAHLLARD-RLYAHSRRVLSRLVALR 95
Query: 70 DPISVISVLNQYSKRK-DYNPNEALYTLIINKL----AQAKRFDAIEDIMQRIKVEKLCR 124
P S+++ + P + +++ L A D + R++ ++
Sbjct: 96 RPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPP 155
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
+ + ++++ + +GR+ + LF+ +P+ P+V TFN+V++ L E +
Sbjct: 156 NTRTCNHILLRLARDRSGRL---VRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEAR 208
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+++ ++G D N L+ G + G L+ +++E + C+ +V TY+ L++
Sbjct: 209 SLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCF 268
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C+ G +E A+G M+ EG+ A+ VTF+ + K+G V E MKL +M+ +G N
Sbjct: 269 CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNE 328
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y ++ G R +A L+ M+ + + + V+Y L+ GLC ++ V + + VL+
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388
Query: 364 MVQQG 368
M + G
Sbjct: 389 MEKAG 393
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 134/293 (45%), Gaps = 4/293 (1%)
Query: 81 YSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG 138
+S+ K+ P+ + +I+ + D +E +++ ++ C+ +D YN +
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG-CK-ADVVTYNALINCF 268
Query: 139 NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
GR+ A M +V TF+ ++ L E ++ G+ ++
Sbjct: 269 CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNE 328
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
L+ G C+ G L+ A +LDE +Q NV TY+ L+ GLC++ V EA +L
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
ME G+ A+ + + LI G E+ + LL MK KG + + Y ++ GL + +
Sbjct: 389 MEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHK 448
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EAK L+ +M + P+++ Y ++ V + +L+K++ GF P
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP 501
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 134/298 (44%), Gaps = 4/298 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ N YT++++ L + ++ ED+++ + EK ++ Y + I+G+ +
Sbjct: 356 RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM--EKAGVRANELLYTTL-IHGHFMNK 412
Query: 144 IS-KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
S KA+ L +M + + + ++ L + E + + T + G+E +
Sbjct: 413 NSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYT 472
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++ ++G + A +L + +PNV TY L+ GLC+ G+++EA +M
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDL 532
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+D + + L+ GL K G + E ++L M KG + Y +L G L + +A
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L +MI + Y I G CN ++ + V +M+ G P ++ ++
Sbjct: 593 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 117/252 (46%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F +N++ + G +++A M C P V TFN +++ E++ +
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEE 248
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ G + D N L+ C+ G +E A+ ++ NV T+ST + C++G
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V EA L +M G+ + T+ LI G K G++++ + LL+ M +G N +Y
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ GL +++ EA++++ M + + + Y LIHG K E +L +M +G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428
Query: 369 FVPRMGMWREIV 380
+ ++ ++
Sbjct: 429 LELDISLYGALI 440
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGR+ AI L +M +V T+ ++++ L + E + + K GV +
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G N N E A +L E + E ++ Y L+ GLC ++EA LL +M+
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G++ + + + ++ K GKV E + +L+++ G PN +Y ++ GL
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSID 520
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
EA +M + P+ +Y L+ GLC + + + +MV +G
Sbjct: 521 EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGM 569
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-----AGR 143
PN +YT +++ ++ + ++Q+I GF NVI + AG
Sbjct: 466 PNYIIYTTMMDACFKSGKVPEAIAMLQKI-------LDSGFQPNVITYCALIDGLCKAGS 518
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I +AI M P+V+ + +++ L E ++ G+ +D
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL G + GNL AF + + + ++ Y+ + G C + EA + M G
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHG 638
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
I D +N LIS +K G +EE + L + M+
Sbjct: 639 IAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 141/310 (45%), Gaps = 17/310 (5%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN-------MAGRISK 146
Y +I+ L + F + ++Q + K + F +++ G +G I+
Sbjct: 22 YCAMIHFLCSHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITA 81
Query: 147 AIETLFDMPSYNCWPSVK---------TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+E F + +C+ + T VL L+ K + + G Y + G
Sbjct: 82 YLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPAS 141
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
NIL+ C+ G++ A V D K P+V +Y+TLM+G G+++E F L
Sbjct: 142 LYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 201
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M + G+ D T+++LI+GL K+ K+++ KL + M KG PNS ++ ++ G
Sbjct: 202 AMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNG 261
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
A E+ +M+ + + P V+Y LI+GLC + ++ ++ +M G P +
Sbjct: 262 WVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYT 321
Query: 378 EIV-GCVTFG 386
++ GC G
Sbjct: 322 TLIDGCCKEG 331
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 127/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + E + +
Sbjct: 143 YFFNILMHRFCKEGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 201
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV D ++L+ GLC+ ++ A + DE ++ PN T++TL+ G C+ G
Sbjct: 202 AMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNG 261
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D VT+N LI GL K+G +++ L++ M G P+ +Y
Sbjct: 262 WVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYT 321
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E MI E + V+Y LI GLC + D + +L++M+
Sbjct: 322 TLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 381
Query: 368 GFVPRMGMWREIV 380
G P + I+
Sbjct: 382 GLKPDTRTYTMII 394
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S+ FN++++ Q ++ + K G+ N L+ G G+L+ F +
Sbjct: 141 SLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
P+V TYS L++GLC++ +++A L + M +G+ ++VTF LI G K
Sbjct: 201 SAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKN 260
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G V+ M++ ++M + P+ +Y ++YGL K +A +L+ M + P ++Y
Sbjct: 261 GWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITY 320
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQ 367
LI G C + ++ K M+Q+
Sbjct: 321 TTLIDGCCKEGDLDTAFEHRKMMIQE 346
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 110/211 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ + G+ ++ L+ G C+NG ++ A +
Sbjct: 210 PDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEI 269
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+ L++GLC+KG++++A L++ M G+ D +T+ LI G K
Sbjct: 270 YKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCK 329
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + + M + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 330 EGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRT 389
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G VP
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ GLC+ G+L+ A ++DE +P+ TY+TL+ G C++G+++ AF
Sbjct: 281 DLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHR 340
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ M E I D V + LISGL ++G+ + K+L M G P++ +Y ++ K
Sbjct: 341 KMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKK 400
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+ +L+ M + PS V+Y L++G
Sbjct: 401 GDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 12/230 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISK 146
+P+ Y+++IN L + + D + + + L S F I G+ G +
Sbjct: 209 HPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTF---TTLIDGHCKNGWVDL 265
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+E M S + P + T+N ++ L + + + G++ D L+
Sbjct: 266 AMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLID 325
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVR----TYSTLMHGLCEKGNVEEAFGLLERMESE 262
G C+ G+L+ AF E K + N+R Y+ L+ GLC++G +A +L M S
Sbjct: 326 GCCKEGDLDTAF----EHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 381
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
G+ DT T+ ++I+ K+G V +G KLL+ M+ G P+ +Y ++ G
Sbjct: 382 GLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 9/263 (3%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN + S+A++ L M P+ T+N++L + +
Sbjct: 209 DAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFF 268
Query: 187 TSAAKLGVEIDACCLNIL-----LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
K G + C +++ L GL G L+ A V DE ++ C P++ TY+ L+
Sbjct: 269 LQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQ 328
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
C+KGNVE+A + + M +G + VT+ +LI GL GK++ MKLL++MK +GC P
Sbjct: 329 VTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEP 388
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMI-CERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
N +Y ++ L ++ +A L M E P+ +Y +I + +K ED+
Sbjct: 389 NVQTYNVLIGYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVA 448
Query: 361 LK---KMVQQGFVPRMGMWREIV 380
+ +MV +G++PR M+ ++
Sbjct: 449 ARMVVEMVDRGYLPRRFMFNRVL 471
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 114/234 (48%), Gaps = 9/234 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKV----EKLCRFSDGFFYNVIKIYGNMAGRI 144
P + Y +I+ ++ + D ++K ++ C+ D Y + +AG++
Sbjct: 243 PTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCK-PDVVSYTTVLHGLGVAGQL 301
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA + +M C PS+ T+N ++ + + ++ + G + +L
Sbjct: 302 DKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVL 361
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ESEG 263
++GLC G ++ A +LD+ ++ CEPNV+TY+ L+ L E+G++E+A L E M + E
Sbjct: 362 IRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHLFETMSKGEE 421
Query: 264 IDADTVTFNILISGLRKQGKVEE---GMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ T+NI+IS + + + E+ +++ M +G P + VL GL+
Sbjct: 422 CLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRRFMFNRVLNGLM 475
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 114/249 (45%), Gaps = 6/249 (2%)
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
S+ + FN +L+ LV ++ G+ + A + DA N L G C +
Sbjct: 169 SHGVAQDLPLFNSLLDALVKSRHAGKAASL-VRALERRFPPDAVTYNTLADGWCRVKDTS 227
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID-----ADTVT 270
A +L + + P TY+ ++ G G ++ A+ +M+ G + D V+
Sbjct: 228 RALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVS 287
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ ++ GL G++++ K+ + M +GC P+ A+Y ++ K +A + MI
Sbjct: 288 YTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMI 347
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
+ P+ V+Y LI GLC+ ++ +L KM ++G P + + ++G + D
Sbjct: 348 RKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIE 407
Query: 391 NRVYVTETV 399
+++ ET+
Sbjct: 408 KALHLFETM 416
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 112/241 (46%), Gaps = 6/241 (2%)
Query: 137 YGNMAGRISKAIET------LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YG + + K ET L + ++ P V +N ++N L KL G+ +Y+
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 224
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G+ D L+ G C G+L+ AF +L+E +N PNV T++ L+ L ++G ++
Sbjct: 225 VKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMK 284
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA LL M I D T+N LI G +V+ + M +G P+ Y ++
Sbjct: 285 EAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMI 344
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
GL K EA L M + M P V+Y LI GLC +E + K+M +QG
Sbjct: 345 NGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQ 404
Query: 371 P 371
P
Sbjct: 405 P 405
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 147/305 (48%), Gaps = 5/305 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P+ +Y IIN L + K D+ + V+ + D Y + I+G + G + +A
Sbjct: 195 PDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGIS--PDVVTYTTL-IHGFCIMGHLKEA 251
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L +M N P+V TFN++++ L E + + K ++ D N L+ G
Sbjct: 252 FSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDG 311
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
++ A YV ++ P+V+ Y+ +++GLC+ V+EA L E M+ + + D
Sbjct: 312 YFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPD 371
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+N LI GL K +E + L +RMK +G P+ SY +L GL R +AKE+
Sbjct: 372 IVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQ 431
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
R++ + + +Y LI+ LC ++ + KM +G +P + I+ + F K
Sbjct: 432 RLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRAL-FEK 490
Query: 388 DNRNR 392
D ++
Sbjct: 491 DENDK 495
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 113/224 (50%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P FN +L+ LV+ K Y + ++ G+ D C L+IL+ C ++ AF V
Sbjct: 55 PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
K+ PN T +TL+ GLC +G +++A +++ ++G D V++ LI+GL K
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ + +LL +++G P+ Y ++ L K +A ++ MI + +SP V+
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
Y LIHG C +++ +L +M + P + + ++ ++
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALS 278
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 3/204 (1%)
Query: 180 GEIQGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
GE + + KL V+ D N ++ LC+N L A V E + P+V TY
Sbjct: 176 GETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTY 235
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+TL+HG C G+++EAF LL M+ + I+ + TFNILI L K+GK++E LL M
Sbjct: 236 TTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMK 295
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
P+ +Y ++ G AK + M ++P Y +I+GLC K+V++
Sbjct: 296 ACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDE 355
Query: 357 VDWVLKKMVQQGFVPRMGMWREIV 380
+ ++M + +P + + ++
Sbjct: 356 AMSLFEEMKHKNMIPDIVTYNSLI 379
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 141/301 (46%), Gaps = 7/301 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF-SDGFFYNVIKIYGNMA 141
KR P + Y +++ A R I+ + ++ F D YNV+ + A
Sbjct: 270 KRDGIAPTQPTYNTLVSAFA---RLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQA 326
Query: 142 GRISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ +A +M P V T+N +++ + + + GV+
Sbjct: 327 GKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVT 386
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NI++K LC+ G LE A L++ ++ P+V TY+TL+ C+ GNV +AF L++ M
Sbjct: 387 HNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMV 446
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G+ DT T N ++ L K + E+ +LL +G P+ SY V+ +
Sbjct: 447 GKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPE 506
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCN-QKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A L +MI ++ PS +Y LI GLC ++L E +D L + V++G VP + I
Sbjct: 507 PALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDK-LNEFVEKGLVPDETTYNII 565
Query: 380 V 380
+
Sbjct: 566 I 566
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 141/312 (45%), Gaps = 5/312 (1%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF--DAIEDIMQRIK 118
L ++ LR P +L+ +R+ P+ +++ L+++ A D+ + +
Sbjct: 141 ALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLI 200
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
+L + + +N++ G ++ A+ TL M + P T+N +LN +
Sbjct: 201 ELRL--HPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGM 258
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
GE + + + G+ N L+ G ++ A V++ EP++RTY+
Sbjct: 259 LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNV 318
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGID-ADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
L GLC+ G V+EAF L + ME G D VT+N L+ K + ++LLE M+ K
Sbjct: 319 LAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK 378
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G P ++ V+ L + + EA + ++ E ++P ++Y LI C V
Sbjct: 379 GVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKA 438
Query: 358 DWVLKKMVQQGF 369
++ +MV +G
Sbjct: 439 FTLMDEMVGKGL 450
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 152/345 (44%), Gaps = 27/345 (7%)
Query: 53 KDWLSPTE-----VLKIFSNL---RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQA 104
+D ++PT+ ++ F+ L + V+ + Y + P+ Y ++ L QA
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG----FEPDLRTYNVLAMGLCQA 326
Query: 105 KRFDA---IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK-AIETLFDMPSYNCW 160
+ D ++D M+R+ D YN + + R S A+ L +M
Sbjct: 327 GKVDEAFRLKDEMERLGTA----LPDVVTYNTL-VDACFKWRCSSDALRLLEEMRDKGVK 381
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P++ T N+V+ L E G A+ G+ D N L+ C+ GN+ AF +
Sbjct: 382 PTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTL 441
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+DE + + + T +T+++ LC+ E+A LL G D V++ +++ K
Sbjct: 442 MDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+ E ++L ++M + P+ ++Y ++ GL +R EA + + + + + P +
Sbjct: 502 EYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETT 561
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
Y +IH C + +E+ KMV+ F P ++V C T
Sbjct: 562 YNIIIHAYCKEGDLENAFRFHNKMVENSFKP------DVVTCNTL 600
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 36/245 (14%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ T+N ++ L + E + G+ D NI++ C+ G+LE AF
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRF 581
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
++ + + +P+V T +TLM+GLC G +++A L E +G D +T+N LI + K
Sbjct: 582 HNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK 641
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI---------- 330
G V+ + + M+ KG P++ +Y VL L + R EA ++ ++
Sbjct: 642 VGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFA 701
Query: 331 CERMSPS--------------------------FVSYKKLIHGLCNQKLVEDVDWVLKKM 364
C + PS +Y + ++GLC +++ VL +M
Sbjct: 702 CPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEM 761
Query: 365 VQQGF 369
+Q+G
Sbjct: 762 MQKGM 766
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 7/218 (3%)
Query: 161 PSVKTFNLVLNLLV--SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
PS++ N VL+ L + L ++ S +L + + N+L+ C G L A
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADAL 228
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
L P+ TY+TL++ C KG + EA LL RM+ +GI T+N L+S
Sbjct: 229 ATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAF 288
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS--- 335
+ G +++ K++E M G P+ +Y + GL + EA L M ER+
Sbjct: 289 ARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEM--ERLGTAL 346
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
P V+Y L+ + D +L++M +G P +
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 124/307 (40%), Gaps = 19/307 (6%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
W ++ L++ +RD K P + +++ L + + + +
Sbjct: 362 WRCSSDALRLLEEMRD--------------KGVKPTLVTHNIVVKSLCKEGKLEEALGKL 407
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
++I E L D YN + AG ++KA + +M T N VL L
Sbjct: 408 EKIAEEGLA--PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC 465
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
K Y + + + S + G D ++ + N E A + D+ ++ P++
Sbjct: 466 KMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS 525
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TY+TL+ GLC ++EA L +G+ D T+NI+I K+G +E + +M
Sbjct: 526 TYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKM 585
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
P+ + ++ GL + +A +L + + ++Y LI +C V
Sbjct: 586 VENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK---V 642
Query: 355 EDVDWVL 361
DVD L
Sbjct: 643 GDVDTAL 649
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 1/158 (0%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN + G + A+ DM P T+N+VL+ L A E +
Sbjct: 628 DVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNML 687
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN-VRTYSTLMHGLCE 245
A G + +L + +++ + + + N + TY ++GLC
Sbjct: 688 HKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCT 747
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283
G ++EA +L+ M +G+ D T+ L+ GL K+ K
Sbjct: 748 GGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 136/298 (45%), Gaps = 4/298 (1%)
Query: 85 KDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
KD N P++ Y ++ L++ D + ++ + E+ R D Y+ I G
Sbjct: 365 KDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAE-ERRFRV-DKVGYSAIVHSFCREG 422
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ KA E + +M S C P V T+ V+N L + + + + K G + +
Sbjct: 423 RMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYT 482
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
LL GLC+NGN A +++ + PN TYS LMHG +G EA L+ M +
Sbjct: 483 ALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKK 542
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G V N+LI L ++ KV+E + +E+ GC N ++ V++G K A
Sbjct: 543 GFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAA 602
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ M P V+Y +I L + +E+ + KM++ G +P +R ++
Sbjct: 603 LSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVI 660
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 158/308 (51%), Gaps = 13/308 (4%)
Query: 68 LRDPISVISVLNQYSKRKDYN-PNEALYTLII-NKLAQAKRFDAIEDIMQRIKVEKLCRF 125
LR+ + V++++ + D + N A++ L++ N+L +A RF + MQ +++E
Sbjct: 248 LRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF---LERMQIVEIE----- 299
Query: 126 SDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
+ YN +IK Y ++ R+ A+E + +MP C P ++ V+ L K E++
Sbjct: 300 PNVITYNCLIKGYCDLH-RLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRL 358
Query: 185 IYTSAAK-LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ K + D N + L ++G+ + A L E ++ + YS ++H
Sbjct: 359 LMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSF 418
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C +G +++A ++ M S+G D VT+ +I+GL ++ KV++ K+L +M GC PN+
Sbjct: 419 CREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNT 478
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
SY +L GL EA+E++ + P+ ++Y L+HG + + ++++
Sbjct: 479 VSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVRE 538
Query: 364 MVQQGFVP 371
M+++GF P
Sbjct: 539 MIKKGFFP 546
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 134/283 (47%), Gaps = 14/283 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG--RISK 146
P+ YT +IN L Q ++ D + +++++ + G N + + G +
Sbjct: 441 PDVVTYTSVINGLCQERKVDQAKKMLRQM-------YKHGCKPNTVSYTALLNGLCKNGN 493
Query: 147 AIET--LFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
++E + +M + W P+ T++++++ E + K G +N+
Sbjct: 494 SLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINL 553
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++ LC+ ++ A +++ C NV ++T++HG C+K ++E A LL+ M
Sbjct: 554 LIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSN 613
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D VT+ +I L K+G++EE KL +M G P +Y+ V++ R +
Sbjct: 614 KHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLL 673
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+L+ +M+ + + +Y ++I LC+ +E +L K+++
Sbjct: 674 KLLEKMLSRQECRT--AYNQVIEKLCSFGNLEQAYKLLGKVLR 714
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G L A VL K EP++ +T +H L +++A LERM+ I+ + +T+
Sbjct: 246 GKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITY 305
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N LI G ++E+ M+L+ M KGC P+ SY V+ L +KR E + L+ +M+
Sbjct: 306 NCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLK 365
Query: 332 E-RMSPSFVSYKKLIHGL 348
+ + P V+Y +H L
Sbjct: 366 DSNLLPDQVTYNTFVHML 383
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 218 FYVLDEFPKQNCEPNVR--TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
FY D + +P R + +M G + A +L M+ GI+ D N I
Sbjct: 215 FYWADRQWRYRHDPIRRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAI 274
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
L ++++ ++ LERM+ PN +Y ++ G D R +A EL+ M + S
Sbjct: 275 HVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCS 334
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
P +SY ++ LC +K +++V +++KM++
Sbjct: 335 PDKISYYTVMGFLCKEKRIKEVRLLMEKMLK 365
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 107/260 (41%), Gaps = 17/260 (6%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + P L+I L Q ++ D + M++ ++G NV+ + G
Sbjct: 541 KKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQC-------LNNGCAVNVVNFTTVIHGF 593
Query: 144 ISK-----AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
K A+ L DM N P V T+ +++ L E + ++G+
Sbjct: 594 CQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTP 653
Query: 199 CCLNILLKGLCENGNLEAAFYVLDE-FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
++ C G +E +L++ +Q C Y+ ++ LC GN+E+A+ LL
Sbjct: 654 VTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT---AYNQVIEKLCSFGNLEQAYKLLG 710
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
++ D T ++LI +G + RM + P+ ++V L+ +
Sbjct: 711 KVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEG 770
Query: 318 RFPEAKELVGRMICE-RMSP 336
+ EA +L+ R + R+SP
Sbjct: 771 KSEEADKLILRFVERGRISP 790
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 52/112 (46%)
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
F ++ + GK+ M++L M+ G P+ + ++ L+ R +A + RM
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 293
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ P+ ++Y LI G C+ +ED ++ +M +G P + ++G
Sbjct: 294 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMG 345
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 85 SGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYF 144
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V + +TLM+G G+++E F L M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVML 204
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ + + M KG PN ++ ++ G R
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
AKE+ +M+ + + P ++Y LI+GLC + ++ ++ M +G P + ++
Sbjct: 265 LAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLI 324
Query: 381 -GCVTFG 386
GC G
Sbjct: 325 BGCCKEG 331
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV + N ++N + E + +
Sbjct: 143 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKS 201
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
GV+ D ++L+ GLC+ ++ A DE + PN T++TL+ G C+ G
Sbjct: 202 VMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNG 261
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 262 RVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYT 321
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V Y LI GLC + D + +L++M+
Sbjct: 322 TLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSV 381
Query: 368 GFVPRMGMWREIV 380
P G + I+
Sbjct: 382 RLKPDTGTYTMII 394
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 109/211 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + + G+ + L+ G C+NG ++ A +
Sbjct: 210 PDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEI 269
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G K
Sbjct: 270 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCK 329
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ + +RM + + Y ++ GL + R +A++++ M+ R+ P +
Sbjct: 330 EGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGT 389
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V +LK+M + G P
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEMQRDGHAP 420
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 83/151 (54%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ GLC+ G+L+ A ++D+ + +P+ TY+TL+ G C++G+++ AF
Sbjct: 281 DLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHR 340
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+RM E I D V + LISGL ++G+ + K+L M P++ +Y ++ K
Sbjct: 341 KRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKK 400
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+ +L+ M + +PS V+Y L++G
Sbjct: 401 GDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
Length = 461
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 133/305 (43%), Gaps = 15/305 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD-GFFYNVIKIYGNMAG 142
+K + +T ++ L KR DI+ LCR + G NV + G
Sbjct: 112 KKGFRVEAITFTPLLKGLCADKRTSDAMDIV-------LCRMTQLGCIPNVFSCTILLKG 164
Query: 143 -----RISKAIETLFDMP--SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
R +A+E L MP +C P V +N V+N + Y G+
Sbjct: 165 LCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGIL 224
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D + ++ LC+ ++ A VL+ K PN RTY++++HG C G + EA G
Sbjct: 225 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGF 284
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
L+ M S+G++ D VT N+L+ L K + E K+ M G P+ +Y +L G
Sbjct: 285 LKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYAT 344
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
K E +L+ M+ + P+ + LI Q+ V++ V KM QQG P
Sbjct: 345 KGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVN 404
Query: 376 WREIV 380
+R ++
Sbjct: 405 YRTVI 409
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 120/270 (44%), Gaps = 12/270 (4%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG--- 142
D P+ LY +IN + D + F G +V+ +A
Sbjct: 187 DCPPDVVLYNTVINGFFKEGDPDKAYATYHEM-------FDQGILPDVVTYSSIIAALCK 239
Query: 143 --RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ KA+E L M P+ +T+N +++ S+ E G GVE D
Sbjct: 240 AQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVT 299
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ LC+N A + + K +P++ TY TL+ G KG + E LL+ M
Sbjct: 300 CNLLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMV 359
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI + FNILI KQ KV+E M + +M+ +G PN+ +Y+ V+ L R
Sbjct: 360 WNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVY 419
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+A + +MI E ++P + Y LIHG C
Sbjct: 420 DAVLTLKQMINEGLTPDIIVYTPLIHGFCT 449
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PN+ TYS L+ C G ++ F L + +G + +TF L+ GL + + M +
Sbjct: 82 PNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 141
Query: 291 -LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE--RMSPSFVSYKKLIHG 347
L RM GC PN S +L GL D+ R EA EL+ M + P V Y +I+G
Sbjct: 142 VLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVING 201
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ + +M QG +P + + I+
Sbjct: 202 FFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIA 235
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 145/291 (49%), Gaps = 16/291 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++++ L++A R D ++++++ ++ K + + +N +G+ A
Sbjct: 255 PDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAK 314
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA-CC------L 201
L M P++ ++N V++ L + G + + + K+ +D+ CC
Sbjct: 315 NILLGMIESGSLPNLLSYNFVIDGLCKS---GNVDDAWKLSRKM---LDSGCCKPDVIFF 368
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C+ G L A +L E +N C P+V TY+TL+ G + G++++A LL+ M+
Sbjct: 369 NTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQ 428
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G + VT+ LI+G K G EE L + M KGC+P+ +Y VL
Sbjct: 429 AVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMS 488
Query: 321 EAKELVGRM--ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+A+ + ++ SP ++Y+ LI G C + E +L++M +G+
Sbjct: 489 KAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGW 539
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 132/303 (43%), Gaps = 20/303 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK-------VEKLCRFSDGFFYNVIKIYGNMA 141
P+ Y I+ L +A + D ++++ + V C G A
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLC---------KA 235
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI--YTSAAKLGVEIDAC 199
RI A + M C P T++++L+ L A + + + A K G ++
Sbjct: 236 NRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVY 295
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N + LC +G A +L + PN+ +Y+ ++ GLC+ GNV++A+ L +M
Sbjct: 296 THNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKM 355
Query: 260 ESEGI-DADTVTFNILISGLRKQGKVEEGMKLLERMKGKG-CYPNSASYQEVLYGLLDKK 317
G D + FN LISG K G++ + +LL MK K C P+ +Y ++ G
Sbjct: 356 LDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFG 415
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+AK L+ M P+ V+Y LI+G + E+ + + +M +G P + +
Sbjct: 416 SLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYN 475
Query: 378 EIV 380
++
Sbjct: 476 TVL 478
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M + G DA VT+ LI GL K G ++ LL++M GC PN +Y ++ GL +R
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
+A + V RM+ P V+Y LIHGLC ++D VL+++V+ GF P +
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120
Query: 379 IV 380
+V
Sbjct: 121 LV 122
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 10/174 (5%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC++G+L+AA +L + C PNV TY+ L+ GLC+ +A ++RM G
Sbjct: 16 LIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG 75
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D VT+N LI GL ++++ +L+ + G PN +Y ++ ++R +A+
Sbjct: 76 CEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQAR 135
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKL------VEDVDWVLKKMVQQGFVP 371
L+ MI + V Y I G C + D D +M++ G +P
Sbjct: 136 GLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGD----EMIESGRIP 185
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 143/327 (43%), Gaps = 57/327 (17%)
Query: 89 PNEALYTLIINKLAQAKR-FDAIEDI--MQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRI 144
PN YT +I+ L +A+R DAI+ + M R E D YN + I+G MA R+
Sbjct: 43 PNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEP-----DLVTYNSL-IHGLCMANRM 96
Query: 145 SKAIETLFDM------PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
A L ++ P++ + ++ +N L A+ + S L V ID
Sbjct: 97 DDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYID- 155
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
C+ + C++ E DE + P+V TY+T + GLC+ G +++ +LE
Sbjct: 156 -CIFGFCEARCQSSRYECRDG--DEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEE 212
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY------------ 306
M+ GI D VTF +ISGL K ++++ ++ + M +GC P+S +Y
Sbjct: 213 MDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANR 272
Query: 307 ----QEVLY---------------------GLLDKKRFPEAKELVGRMICERMSPSFVSY 341
EVL L +FP AK ++ MI P+ +SY
Sbjct: 273 LDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSY 332
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+I GLC V+D + +KM+ G
Sbjct: 333 NFVIDGLCKSGNVDDAWKLSRKMLDSG 359
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 86/151 (56%)
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+ +V TY+TL+ GLC+ G+++ A LL++M G + VT+ LI GL K + + ++
Sbjct: 7 DASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQ 66
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
++RM GC P+ +Y +++GL R +A ++ ++ +P+ ++Y L+ C
Sbjct: 67 TVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNC 126
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ ++ ++++M+ +G V + ++ + +
Sbjct: 127 RRRRLDQARGLIREMILRGSVCNLVVYIDCI 157
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 109/244 (44%), Gaps = 4/244 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +I+ +A R ++ +K + +C D YN + + G + +A
Sbjct: 363 PDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNIC-VPDVVTYNTLIDGQSKFGSLKQAK 421
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +M + C P+V T+ ++N +Y E + ++ + G D N +L
Sbjct: 422 LLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAF 481
Query: 209 CENGNLEAAFYVLDEFPKQN--CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
+ G + A V + + C P+ TY L+ G C + E+ LL+ M + G
Sbjct: 482 SKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSC 541
Query: 267 DTVTFNILISGLRKQGKV-EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
D+ T+N+LI+ L + +V + + + ++M + C P+++ + ++ L A+ +
Sbjct: 542 DSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSM 601
Query: 326 VGRM 329
V M
Sbjct: 602 VQEM 605
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 113/278 (40%), Gaps = 44/278 (15%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
SV T+ +++ L + Q + A G + L+ GLC+ A +
Sbjct: 9 SVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTV 68
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
+ CEP++ TY++L+HGLC +++A +L+ + G + +T++ L+ ++
Sbjct: 69 KRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRR 128
Query: 282 GKVEEGMKLLERM--KGKGC-----------------------------------YPNSA 304
++++ L+ M +G C P+
Sbjct: 129 RRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVV 188
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y + GL + + E++ M + P V++ +I GLC ++D V K M
Sbjct: 189 TYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGM 248
Query: 365 VQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVDSL 402
+++G VP + ++ DN +R +TVD +
Sbjct: 249 LERGCVPDSLTYSIML-------DNLSRANRLDTVDEV 279
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 9/184 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA- 147
PN Y +IN A+ ++ E + + K C F D YN + + AG +SKA
Sbjct: 434 PNVVTYAALINGYAKHGMYEEAESLFDEMSA-KGC-FPDIITYNTVLSAFSKAGMMSKAE 491
Query: 148 --IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+ L + SY C P T+ ++++ A+ + + G D+ N+L+
Sbjct: 492 GVYQQLKNKTSY-CSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLI 550
Query: 206 KGLCENGNLEA-AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG- 263
L E + + A V + Q+C P+ +++L+ G+V A +++ M +G
Sbjct: 551 AKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGH 610
Query: 264 -IDA 266
+DA
Sbjct: 611 LVDA 614
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + ++ PSV +FN ++N + E +
Sbjct: 137 YFFNILMHSFVKEGEIRLA-QSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE PN T++TL+ G C+
Sbjct: 196 AMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNR 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 121/240 (50%), Gaps = 9/240 (3%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVK---------TFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+G I+ +E+ F + C+ +K T VL L+ K + + G Y + +
Sbjct: 70 SGLITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLE 129
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G NIL+ + G + A V D K + P+V +++TLM+G + G+++E
Sbjct: 130 CGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDE 189
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
F L M++ G+ +D T+++LI+GL K K+++ +L + M G PN ++ ++
Sbjct: 190 GFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLID 249
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G +R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +G P
Sbjct: 250 GHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+LAQ+ FDAI R V +G+ IK+ G + + M +
Sbjct: 153 RLAQSV-FDAITKWSLRPSVVSFNTLMNGY----IKL-----GDLDEGFRLKNAMQASGV 202
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
V T+++++N L A + ++ G+ + L+ G C+N ++ A
Sbjct: 203 QSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAME 262
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+ LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+G +E + +RM + + +Y ++ GL + R +A++++ M+ + P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+Y +I+ C + V +LK+M + G++P
Sbjct: 383 TYTMIINEFCEKGDVWTGLKLLKEMQRDGYMP 414
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 106/209 (50%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ V GEI Q ++ + K + N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHSFVKE---GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ + + +V TYS L++GLC+ +++A L + M G+ + VTF LI G
Sbjct: 192 RLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K +V+ M++ ++M + P+ +Y ++YGL K +A++L+ M + + P
Sbjct: 252 CKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 12/276 (4%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDA---IEDIMQRIKVEKLCR 124
+R SV + ++S R P+ + ++N + D +++ MQ V+
Sbjct: 152 IRLAQSVFDAITKWSLR----PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQ---- 203
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
SD + Y+V+ A ++ A E +M P+ TF +++ +
Sbjct: 204 -SDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAME 262
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ +K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 5/284 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKA 147
PN+ Y ++I L R +E+ + ++ +L + + F YN + I G +A G + K
Sbjct: 1154 PNDVTYNVVITGLT---RKGDLEEAAELVEGMRLSKKASSFTYNPL-ITGLLARGCVKKV 1209
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +M + P+V T+N +++ L+ + L Q + +G+ D N LL G
Sbjct: 1210 YDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNG 1269
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ GNL+ A + + + P V TY+ L+ G C G++EEA L E M +G +
Sbjct: 1270 YCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPN 1329
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+ IL+ G + + + M KG P+ +Y + L A EL
Sbjct: 1330 VCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELRE 1389
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++ E +S V+Y LIHGLC ++D + KMV G P
Sbjct: 1390 VLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQP 1433
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 110/255 (43%), Gaps = 36/255 (14%)
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M S+ P VK N VL +L A + +I ++ +LG+E N LL + G
Sbjct: 1074 EMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEG 1133
Query: 213 NLEAAFYVLDEFPKQ--NCEPNVRTYSTLMHGLCEKGNVEEA------------------ 252
+ +L E + C PN TY+ ++ GL KG++EEA
Sbjct: 1134 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTY 1193
Query: 253 ----FGLLER------------MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
GLL R ME+EGI VT+N +I GL + G VE M+
Sbjct: 1194 NPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRA 1253
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
G P+ +Y +L G EA L G + ++P+ ++Y LI G C +E+
Sbjct: 1254 MGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEE 1313
Query: 357 VDWVLKKMVQQGFVP 371
+ ++M +QG +P
Sbjct: 1314 ARILKEEMGEQGCLP 1328
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 131/303 (43%), Gaps = 22/303 (7%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L D I+ S+LN Y K N EAL L+ L +A + + I ++ CR D
Sbjct: 1257 LPDVITYNSLLNGYCKAG--NLKEAL--LLFGDLRRAGLAPTV--LTYNILIDGYCRLGD 1310
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
++K +M C P+V T+ +++ ++ + + +
Sbjct: 1311 LEEARILK----------------EEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFD 1354
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
G++ D N + G++ AF + + + + TY+ L+HGLC+ G
Sbjct: 1355 EMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTG 1414
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
N+++A L +M S G+ D +T+ LI ++G + E K+ M G P++ ++
Sbjct: 1415 NLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFT 1474
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+++ + A +M+ E + P+ ++Y LIH LC + +M+++
Sbjct: 1475 VIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLER 1534
Query: 368 GFV 370
G V
Sbjct: 1535 GLV 1537
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 110/266 (41%), Gaps = 14/266 (5%)
Query: 89 PNEALYTLI------INKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
PN YT++ + LA A+ F D M ++ C F YN + G
Sbjct: 1328 PNVCTYTILMKGSLNVRSLAMAREF---FDEMLSKGLQPDC-----FAYNTRICAELILG 1379
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
I++A E + T+N++++ L + + + G++ D
Sbjct: 1380 DIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYT 1439
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ CE G L A + + P+ T++ ++H C +GN+ A+G +M E
Sbjct: 1440 CLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEE 1499
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G++ + +T+N+LI L + G+ + M +G N +Y ++ G + +A
Sbjct: 1500 GVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDA 1559
Query: 323 KELVGRMICERMSPSFVSYKKLIHGL 348
M + P ++++K L+ G
Sbjct: 1560 MRFYFEMHQNGIHPDYLTHKALLKGF 1585
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
E P+V+ + ++ L + ++ + E M GI+ VT+N L+ K+G
Sbjct: 1074 EMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEG 1133
Query: 283 KVEEGMKLLERM--KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+ ++ LL+ M +G GC PN +Y V+ GL K EA ELV M + + SF +
Sbjct: 1134 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSF-T 1192
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI GL + V+ V + +M +G +P + + ++
Sbjct: 1193 YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMI 1232
>gi|225466900|ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Vitis vinifera]
Length = 588
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 139/293 (47%), Gaps = 14/293 (4%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY-----NVIKIYGNMAGRI 144
+++ Y ++ LA RFD + ++Q + V C +SDG F + + N R+
Sbjct: 207 DQSTYEWMVKTLAITDRFDDLHSLLQGM-VSNPCPYSDGIFSCPRSEPIFRFALNAFCRV 265
Query: 145 SK------AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
+ + E++ M + PSV +N+++N V+ + + ++ +Y K V+ D
Sbjct: 266 GRLEDAEISFESMRRM--IDGKPSVAMYNILINGYVNCREHEKVMTVYEKMIKDRVKPDV 323
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N L+ C N A + E + C PNV +++TL+ G + EE G+
Sbjct: 324 FTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGIGMAYE 383
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G + VT IL+ GL ++G+V E LL GKG PN Y ++ L ++
Sbjct: 384 MLELGCEFSNVTCEILVDGLCREGRVLEACDLLIDFSGKGALPNGFDYFCLIEALCGEEN 443
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A EL+ ++ + +PS ++ I GL + E+ +++KM+++G +P
Sbjct: 444 VDRALELLDQLWRKGNAPSSIACTAFIEGLRRFRKTEEAFQLMEKMLREGILP 496
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 141/301 (46%), Gaps = 2/301 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D P+ A+Y ++IN + + + + +++ +++ D F +N + +
Sbjct: 283 DGKPSVAMYNILINGYVNCREHEKVMTVYEKMIKDRV--KPDVFTFNSLISSCCRNSQFG 340
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A+E +M C P+V +FN ++ + + E G+ +LG E IL+
Sbjct: 341 LALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGIGMAYEMLELGCEFSNVTCEILV 400
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC G + A +L +F + PN Y L+ LC + NV+ A LL+++ +G
Sbjct: 401 DGLCREGRVLEACDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALELLDQLWRKGNA 460
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
++ I GLR+ K EE +L+E+M +G P+S + +L L + R EA EL
Sbjct: 461 PSSIACTAFIEGLRRFRKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANEL 520
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
+ + +++ L++G + ++ +L +M+ GF+P + + ++ ++
Sbjct: 521 RLLASSKGLDSDGMTFNILVNGYSREGKRKEGKRLLNEMLDLGFIPDLASYNRLMNGLSN 580
Query: 386 G 386
G
Sbjct: 581 G 581
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W + VL L+ K + + G Y + G
Sbjct: 66 SGFLRDAIECYRLTREHKFWVPLDXCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYF 125
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C+ G++ A V D K P+V +++TLM+G G+++E F L M
Sbjct: 126 FNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMH 185
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 245
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + +SP ++Y L +GLC + ++ ++ +M +G P + ++
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 305
Query: 381 -GCVTFG 386
GC G
Sbjct: 306 DGCCKEG 312
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 127/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV +FN ++N + E +
Sbjct: 124 YFFNILMHRFCKEGDIRLA-QSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKN 182
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 183 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNG 242
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N L GL K+G +++ L++ M KG P+ +Y
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 302
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V Y LI GLC + D + +L++M+
Sbjct: 303 TLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSV 362
Query: 368 GFVPRMGMWREIV 380
G P G + I+
Sbjct: 363 GLKPNXGTYTMII 375
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 108/211 (51%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P V T+++++N L + ++ G+ + L+ G C+NG
Sbjct: 184 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 243
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + + Q+ P++ TY+TL +GLC+KG++++A L++ M +G+ D +T+
Sbjct: 244 VDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 303
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+G +E + +RM + + Y ++ GL + R +A++++ M+
Sbjct: 304 LIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVG 363
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+ P+ +Y +I+ C + V +LK+M
Sbjct: 364 LKPNXGTYTMIINEFCKKGDVWTGSKLLKEM 394
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + + L +G + + GR+ A
Sbjct: 190 QPDVYTYSVLINGLCKESKMDDANELFDEMLDKGL--VPNGVTFTTLIDGHCKNGRVDLA 247
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N + L + + + G++ D L+ G
Sbjct: 248 MEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDG 307
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVR----TYSTLMHGLCEKGNVEEAFGLLERMESEG 263
C+ G++E AF E K+ + N+R Y+ L+ GLC++G +A +L M S G
Sbjct: 308 CCKEGDMETAF----EHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVG 363
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
+ + T+ ++I+ K+G V G KLL+ M+
Sbjct: 364 LKPNXGTYTMIINEFCKKGDVWTGSKLLKEMQ 395
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P FN +L +V + + + + + K V +D IL+KG CE G +E +F +
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFF-NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDL 185
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L E + PNV Y+TL+ G C+KG +E+A L M G+ A+ T+ +LI+GL K
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++G ++ E+M+ G +PN +Y V+ L R +A ++ M +S + V+
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI GLC + + + + V+ +M G P + + ++
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 117/231 (50%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG I K+ + L ++ + P+V + +++ + + ++ KLG+ +
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+L+ GL +NG + F + ++ + PN+ TY+ +M+ LC+ G ++AF + + M
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ + VT+N LI GL ++ K+ E K++++MK G PN +Y ++ G +
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A L + +SPS V+Y L+ G C + ++K+M ++G P
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 126/259 (48%), Gaps = 7/259 (2%)
Query: 128 GFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
GF NV+ IY + G I KA + F+M + +T+ +++N L + +
Sbjct: 193 GFSPNVV-IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQ 251
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
+Y + GV + N ++ LC++G + AF V DE ++ N+ TY+TL+
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GLC + + EA ++++M+S+GI+ + +T+N LI G GK+ + + L +K +G P
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ +Y ++ G K A ++V M + PS V+Y LI +E +
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 362 KKMVQQGFVPRMGMWREIV 380
M + G VP + + ++
Sbjct: 432 LSMEELGLVPDVHTYSVLI 450
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 128/295 (43%), Gaps = 10/295 (3%)
Query: 90 NEALYTLIINKL----AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
NE YT++IN L + + F+ E MQ V F + + YN + GR
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEK-MQEDGV-----FPNLYTYNCVMNQLCKDGRTK 285
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A + +M ++ T+N ++ L E + G+ + N L+
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C G L A + + + P++ TY+ L+ G C KG+ A +++ ME GI
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
VT+ ILI + +E+ ++L M+ G P+ +Y +++G K + EA L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + P+ V Y +I G C + +LK+M ++ P + +R ++
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 134/293 (45%), Gaps = 22/293 (7%)
Query: 89 PNEALYTLIINKLAQAKR----FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-- 142
PN Y ++N+L + R F +++ +R G N++ Y + G
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER-----------GVSCNIV-TYNTLIGGL 313
Query: 143 ----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
++++A + + M S P++ T+N +++ G+ + G+
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
NIL+ G C G+ A ++ E ++ +P+ TY+ L+ N+E+A L
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
ME G+ D T+++LI G +G++ E +L + M K C PN Y ++ G +
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A +L+ M + ++P+ SY+ +I LC ++ ++ + +++KM+ G P
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AGR 143
N Y +I L + + + ++ ++K SDG N+I Y + G+
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMK-------SDGINPNLI-TYNTLIDGFCGVGK 353
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-------GVEI 196
+ KA+ D+ S PS+ T+N++++ +G + AAK+ G++
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCR-------KGDTSGAAKMVKEMEERGIKP 406
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
IL+ + N+E A + + P+V TYS L+HG C KG + EA L
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ M + + + V +N +I G K+G +KLL+ M+ K PN ASY+ ++ L +
Sbjct: 467 KSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKE 526
Query: 317 KRFPEAKELVGRMICERMSPS 337
++ EA+ LV +MI + PS
Sbjct: 527 RKSKEAERLVEKMIDSGIDPS 547
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 2/222 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K NPN Y +I+ + + + +K L YN++ G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS--PSLVTYNILVSGFCRKG 387
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
S A + + +M PS T+ ++++ + + + S +LG+ D +
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+L+ G C G + A + ++NCEPN Y+T++ G C++G+ A LL+ ME +
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ + ++ +I L K+ K +E +L+E+M G P+++
Sbjct: 508 ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KAI+ M P V T++++++ E ++ S + E + N
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G C+ G+ A +L E ++ PNV +Y ++ LC++ +EA L+E+M G
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Query: 264 IDADTVTFNIL 274
ID T +++
Sbjct: 544 IDPSTSILSLI 554
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 139/301 (46%), Gaps = 16/301 (5%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ +I+ + + KR + + + + + + +C F N++ + G + K
Sbjct: 945 FKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTF--NILINGLCVEGNLKK 1002
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-------GVEIDAC 199
A L M P++ T+N +LN +G Y +A +L G+E D C
Sbjct: 1003 AGNLLKQMEENGFVPTIVTYNTLLNWYCK-------KGRYKAAIELIDYMICKGIEADVC 1055
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N+ + LC N A+ +L + K+ PN TY+TL++G ++G + A + M
Sbjct: 1056 TYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEM 1115
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ + VT+N LI G G EE ++LL+ M+ G N +Y +L GL ++F
Sbjct: 1116 SKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKF 1175
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
AK L+ RM M ++Y LI GLC ++++ ++ M + G P + + +
Sbjct: 1176 ELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSL 1235
Query: 380 V 380
+
Sbjct: 1236 I 1236
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 12/287 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-----YNVIKIYGNMAGR 143
PN + ++IN L +++++++ +GF YN + + GR
Sbjct: 982 PNVGTFNILINGLCVEGNLKKAGNLLKQME-------ENGFVPTIVTYNTLLNWYCKKGR 1034
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
AIE + M V T+N+ ++ L + + + K + + N
Sbjct: 1035 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 1094
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G + G + A V +E K + PN TY+ L+ G C G+ EEA LL+ ME+ G
Sbjct: 1095 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 1154
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + VT+ L++GL K K E +LLERM+ +Y ++ GL EA
Sbjct: 1155 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAV 1214
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+LVG M + ++P ++Y LI+G C ++ ++ +M + G V
Sbjct: 1215 QLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 1261
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 6/267 (2%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF--SDGFFYNVIKIYGNMAGRI 144
+ P Y ++N + R+ A +++ + +C+ +D YNV R
Sbjct: 1015 FVPTIVTYNTLLNWYCKKGRYKAAIELIDYM----ICKGIEADVCTYNVFIDNLCTNHRS 1070
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+KA L M P+ T+N ++N V G ++ +K + + N L
Sbjct: 1071 AKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNAL 1130
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C G+ E A +LD N TY TL++GLC+ E A LLERM +
Sbjct: 1131 IGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDM 1190
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ + +LI GL K G ++E ++L+ M G P+ +Y ++ G AKE
Sbjct: 1191 VVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKE 1250
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQ 351
++ RM + + + Y LI+ C
Sbjct: 1251 IICRMYRSGLVLNKIIYSTLIYNFCQH 1277
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 135/291 (46%), Gaps = 25/291 (8%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI-ETL 151
+Y L + L +A+ +D+ + I++ LC+ G SK+I L
Sbjct: 865 MYCLTAHILVKARMYDSAKSILRH-----LCQMGIG----------------SKSIFGAL 903
Query: 152 FDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
D P N PSV F+L++ + + + + +G + N++L + +
Sbjct: 904 MDTYPLCNSIPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVK 961
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
+ E + + E + PNV T++ L++GLC +GN+++A LL++ME G VT
Sbjct: 962 DKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 1021
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+N L++ K+G+ + ++L++ M KG + +Y + L R +A L+ +M
Sbjct: 1022 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 1081
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
E +SP+ V+Y LI+G + + V +M + P + ++G
Sbjct: 1082 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIG 1132
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 37/260 (14%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
NE Y ++N L + ++F+ + +++R++V + + G++A
Sbjct: 1158 NEVTYGTLLNGLCKHEKFELAKRLLERMRVNDM-------------VVGHIA-------- 1196
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+ ++++ L + E + + K GV D + L+ G C
Sbjct: 1197 ----------------YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 1240
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
GN+++A ++ + N YSTL++ C+ GNV EA + M G AD
Sbjct: 1241 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF 1300
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T N+L+S L + GK+ E K L M G PNS +Y ++ G A M
Sbjct: 1301 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM 1360
Query: 330 ICERMSPSFVSYKKLIHGLC 349
I PSF +Y L+ GLC
Sbjct: 1361 IKCGQHPSFFTYGSLLKGLC 1380
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 132/300 (44%), Gaps = 15/300 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------ 141
NP+ Y+ +IN + + ++I+ R+ + G N I IY +
Sbjct: 1226 NPDVITYSSLINGFCRVGNIKSAKEIICRM-------YRSGLVLNKI-IYSTLIYNFCQH 1277
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +++A++ M T N++++ L GE + +++G+ ++
Sbjct: 1278 GNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITY 1337
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ G G+ AF D+ K P+ TY +L+ GLC+ GN+ EA L R+
Sbjct: 1338 DCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHY 1397
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
D+V +N L++ K G + E + L ++M P+S +Y +L GL K +
Sbjct: 1398 IPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVT 1457
Query: 322 AKELVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A L G + + P+ V Y L+ GL + + ++M+++G P + I+
Sbjct: 1458 AVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAII 1517
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 100/230 (43%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+I A + +M ++ P+ T+N ++ + E + G+ ++
Sbjct: 1103 GKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTY 1162
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
LL GLC++ E A +L+ + Y+ L+ GLC+ G ++EA L+ M
Sbjct: 1163 GTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYK 1222
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G++ D +T++ LI+G + G ++ +++ RM G N Y ++Y E
Sbjct: 1223 DGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTE 1282
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A ++ M C + L+ LC + + + L M + G VP
Sbjct: 1283 AMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVP 1332
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 136/341 (39%), Gaps = 48/341 (14%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLII--NKLAQAKRFDAIEDIMQRIKVEKLCR 124
N+ + + V +V+N D+ L + + KL +A++F M RI +
Sbjct: 1279 NVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH---MSRIGL----- 1330
Query: 125 FSDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
+ Y+ +I YG++ ++ A DM PS T+ +L L E +
Sbjct: 1331 VPNSITYDCIINGYGSIGDPLN-AFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAK 1389
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ +D+ N LL C++GNL A + D+ + N P+ TYS+L+ GL
Sbjct: 1390 KFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGL 1449
Query: 244 CEKGNV------------------------------------EEAFGLLERMESEGIDAD 267
C KG + AF E M +G D
Sbjct: 1450 CRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPD 1509
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TV FN +I ++G++ + M+ G PN A+Y +L+G K+ L
Sbjct: 1510 TVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYS 1569
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
M+ E + P +++ LI GL + + +L KM+ +G
Sbjct: 1570 TMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEG 1610
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 132/309 (42%), Gaps = 2/309 (0%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
++ + + R PN +YT +++ L++A A + + + C D +
Sbjct: 1456 VTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC--PDTVAF 1513
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N I + G++ KA + M + P++ T+N++L+ + +Y++ +
Sbjct: 1514 NAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMR 1573
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ D + L+ GL ++G + +L + + + T++ L++ E G + +
Sbjct: 1574 EGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRK 1633
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
AF L+ M + G+ D T+N + +GL K+ E +L M G P A Y ++
Sbjct: 1634 AFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLIN 1693
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G+ A +L M V+ ++ GL + ED VL M++ +P
Sbjct: 1694 GMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLP 1753
Query: 372 RMGMWREIV 380
+ + ++
Sbjct: 1754 TIATFTTLM 1762
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 127/299 (42%), Gaps = 8/299 (2%)
Query: 89 PNEALYTLIINKLAQAK---RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PN A Y ++++ ++ + R+ ++ M R + F D ++ + + + +G
Sbjct: 1543 PNLATYNILLHGFSKKQALLRYLSLYSTMMREGI-----FPDKLTFHSLILGLSKSGIPD 1597
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
++ L M TFN+++N + + + LGV D N +
Sbjct: 1598 LGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIF 1657
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GL + + VL E + P Y TL++G+C G+++ AF L + ME+ G
Sbjct: 1658 NGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 1717
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ V + ++ GL GK E+ M +L+ M P A++ +++ + EA +L
Sbjct: 1718 SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1777
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
G M + V+Y LI G+C + ++M + P + + +V ++
Sbjct: 1778 KGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAIS 1836
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 39/271 (14%)
Query: 73 SVISVLNQYSK--RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
+++ L+ YS R+ P++ + +I L+++ D ++ ++ +E +D F
Sbjct: 1560 ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEG--TLADQFT 1617
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY----------- 179
+N++ + +G++ KA + + M + +P T+N + N L +
Sbjct: 1618 FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 1677
Query: 180 ---------------------GEIQGIYT---SAAKLGVEIDACCLNILLKGLCENGNLE 215
G+IQG + LG + +++GL G E
Sbjct: 1678 ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 1737
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A VLD + P + T++TLMH C + EA L ME G+ D V +N+LI
Sbjct: 1738 DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 1797
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G+ G +L E M+ + PN +Y
Sbjct: 1798 MGMCANGDSAAAFELYEEMRHRDLCPNITTY 1828
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 4/285 (1%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKAI 148
N Y II+ L + D +++ +K C S + I I+G G + K +
Sbjct: 324 NVYCYNAIIHGLCKKGELDEALKVLEEMKS---CGISPDVYTYSILIHGFCKQGDVEKGL 380
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +M N PS+ +++ + + L +L I+ G + D +IL+KG
Sbjct: 381 YLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGF 440
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G+L++A +++E + N P+ + +L+HG C+ G A M GI
Sbjct: 441 CMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSI 500
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T N++I ++G+VEE + L+ M+ +G +PN +Y V+ L +++ A EL
Sbjct: 501 ATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPL 560
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
M+ + PS V Y LI G Q + + +M++ G P M
Sbjct: 561 MLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDM 605
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 139/298 (46%), Gaps = 8/298 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKV-EKLCRFSDGFFYNVIK----IYG-NMAG 142
PN YT+++N + +A D Q ++ E++ R +G V+ IYG G
Sbjct: 247 PNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMER--NGESPTVVTYSTYIYGLCRVG 304
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A++ + + S N +V +N +++ L E + G+ D +
Sbjct: 305 YVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYS 364
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ G C+ G++E Y+++E N EP++ +YS+L HGLC+K + + + + +
Sbjct: 365 ILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAA 424
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D ++ILI G QG ++ KL+E M P+ ++++ +++G + A
Sbjct: 425 GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNA 484
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E M+ + PS + +I C + VE+ ++ +M QG P + + ++
Sbjct: 485 LEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVI 542
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 125/295 (42%), Gaps = 2/295 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y ++ Y+++I D+ +M+ + L F +++ + M G
Sbjct: 426 YKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNF-ESLVHGFCKM-GLWVN 483
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+E M PS+ T N++++ E + G+ + N ++
Sbjct: 484 ALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVIN 543
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ E A + K+N P+V YSTL+ G ++ N ++A L RM G+
Sbjct: 544 RLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTP 603
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D V + ILI+ L + ++ E L ++M G P+ SY V+ G +A L
Sbjct: 604 DMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALF 663
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
M+ P+ V+Y L+ G C ++ D ++ +M ++G P + + ++
Sbjct: 664 NEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIA 718
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 144/332 (43%), Gaps = 26/332 (7%)
Query: 49 KLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD 108
+++ K LSP V+K+F +L ++ + K+ ++ + + ++N LA A
Sbjct: 83 RIHRKHVLSPV-VVKVFKSLNWEVARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHM 141
Query: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL 168
+ +++ I +C +YN + + + L + P + SV F+L
Sbjct: 142 EVYALLRDI----VC------YYNKVNLDA------FELFPILLESPK-DAARSVIVFDL 184
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
++ + + + ++ A K G+E+ N LLK L E E + +E
Sbjct: 185 LIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTG 244
Query: 229 CEPNVRTYSTLMHGLCEKGNVEE-------AFGLLERMESEGIDADTVTFNILISGLRKQ 281
PNV TY+ +M+ C KGN E A +LE ME G VT++ I GL +
Sbjct: 245 PPPNVFTYTIMMNFYC-KGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRV 303
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G VE + + + N Y +++GL K EA +++ M +SP +Y
Sbjct: 304 GYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTY 363
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
LIHG C Q VE +++++M P +
Sbjct: 364 SILIHGFCKQGDVEKGLYLIEEMKYSNMEPSL 395
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 111/236 (47%), Gaps = 16/236 (6%)
Query: 89 PNEALYTLIINKLAQAKR----FDAIEDIMQRIKVEKLCRFS---DGFFYNVIKIYGNMA 141
PN Y +IN+L + ++ + +++R + + +S DGF
Sbjct: 533 PNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGF---------AKQ 583
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
KA+ M P + + +++N+L E ++ + G+ D
Sbjct: 584 SNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISY 643
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++ G C G++ A+ + +E ++ P V TY++L+ G C+ ++ A L++ M+
Sbjct: 644 TSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKR 703
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+GI D VT+N+LI+ R++G +++ +++L MK G P+ +Y + + L KK
Sbjct: 704 KGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMMLEWLLKAKK 759
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 112/256 (43%), Gaps = 2/256 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ A +II+ + R + ++M ++ + + F + F YN + + +A+
Sbjct: 498 PSIATCNVIIDAHCREGRVEEALNLMNEMQTQGI--FPNLFTYNAVINRLCKERKSERAL 555
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M N PSV ++ +++ + +Y K+GV D IL+ L
Sbjct: 556 ELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINIL 615
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C + A+ + + + P+ +Y++++ G C G++ +A+ L M G
Sbjct: 616 CHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTV 675
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ L+ G K +++ L++ MK KG P+ +Y ++ + +A E++
Sbjct: 676 VTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNE 735
Query: 329 MICERMSPSFVSYKKL 344
M + P ++Y L
Sbjct: 736 MKENGVLPDHMTYMML 751
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 144/308 (46%), Gaps = 24/308 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-----AGR 143
PN+ +Y +I+ + R + E +++R++ DG F +V+ + AG+
Sbjct: 219 PNKVIYNTLISSFCREGRNEEAERLVERMR-------EDGLFPDVVTFNSRISALCSAGK 271
Query: 144 ISKAIETLFDM--------PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
I +A DM P P++ TFNL+L + E + + S + G
Sbjct: 272 ILEASRIFRDMQIDEELGLPR----PNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNL 327
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
++ NI L GL NG L A L E + EPN+ +++T+M GLC+ G + +A +
Sbjct: 328 MELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMI 387
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+ M S GI DTVT++ L+ G GKV + +L M +GC PN+ + +L+ L
Sbjct: 388 MGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWK 447
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
+ R EA++L+ +M V+ +I GLC +++ +++ M G +
Sbjct: 448 EGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNL 507
Query: 376 WREIVGCV 383
+G V
Sbjct: 508 GNSFIGLV 515
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 119/247 (48%), Gaps = 9/247 (3%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V +N+VL + +Y GV + LN+L+ GLC++G E A V
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+ + C PN ++ L+ G C G A LL+ M S G+ + V +N LIS +
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM-ICERMS---P 336
+G+ EE +L+ERM+ G +P+ ++ + L + EA + M I E + P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM---GMWREIVGCVTFGKDNRNRV 393
+ ++ ++ G C + ++E+ +++ M + G + + +W ++G V GK ++
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIW--LLGLVRNGKLLEAQL 351
Query: 394 YVTETVD 400
+ E VD
Sbjct: 352 ALKEMVD 358
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 124/263 (47%), Gaps = 23/263 (8%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ KA L +M C P+ T N++L+ L E + + + ++D
Sbjct: 413 TGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVT 472
Query: 201 LNILLKGLCENGNLEAAFYVLDEF-----------------------PKQNCEPNVRTYS 237
NI++ GLC++G L+ A +++ + C P++ TYS
Sbjct: 473 CNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYS 532
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
+++GLC+ G ++EA M + + D++ ++ I K GK+ ++L+ M+ +
Sbjct: 533 IIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKR 592
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
GC + +Y ++ GL K + E L+ M + ++P+ +Y +I LC ++D
Sbjct: 593 GCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDA 652
Query: 358 DWVLKKMVQQGFVPRMGMWREIV 380
+L +M+Q+G P + +R ++
Sbjct: 653 TSLLDEMLQKGISPNISSFRLLI 675
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 151/343 (44%), Gaps = 59/343 (17%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR--------------IKVEKLCRFSDGF 129
R+ +PN ++++ L + R E ++Q+ I ++ LC+ G
Sbjct: 428 RRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCK--SGK 485
Query: 130 FYNVIKI------YGNMA-GRISKAIETLFDMPSYN--CWPSVKTFNLVLNLLVSAKLYG 180
++I +G+ A G + + L D S C P + T+++++N L A
Sbjct: 486 LDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLD 545
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E + + + D+ + + C++G + +AF VL + K+ C +++TY++L+
Sbjct: 546 EARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLI 605
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
GL K + E +GLL+ M+ +GI + T+N +IS L + G++++ LL+ M KG
Sbjct: 606 LGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGIS 665
Query: 301 PNSASY-----------------------------QEVLYGLLDKK-----RFPEAKELV 326
PN +S+ +E LY L+ + EAKEL
Sbjct: 666 PNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELF 725
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ Y LI LC +++E+ +L KM+ +G+
Sbjct: 726 DAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGY 768
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 112/275 (40%), Gaps = 40/275 (14%)
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
DM P T NL++ L + + + + ++ G + IL++G C G
Sbjct: 141 DMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAG 200
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV--- 269
A +LD +PN Y+TL+ C +G EEA L+ERM +G+ D V
Sbjct: 201 LSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFN 260
Query: 270 ------------------------------------TFNILISGLRKQGKVEEGMKLLER 293
TFN+++ G K+G +EE L+E
Sbjct: 261 SRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVES 320
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
MK G SY L GL+ + EA+ + M+ + + P+ S+ ++ GLC L
Sbjct: 321 MKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGL 380
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
+ D ++ M+ G P + ++ GC + GK
Sbjct: 381 ISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGK 415
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 131/316 (41%), Gaps = 53/316 (16%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDA----- 109
W+ + L N S I +++ S K P+ Y++IIN L +A R D
Sbjct: 497 WIHGSAALGNLGN-----SFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKF 551
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN-L 168
IE + + + + + D F ++ K G+IS A L DM C S++T+N L
Sbjct: 552 IEMVGKSLHPDSI--IYDTFIHSFCK-----HGKISSAFRVLKDMEKRGCNKSLQTYNSL 604
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
+L L +++ EI G+ + G+ + C N ++ LCE G ++ A +LDE ++
Sbjct: 605 ILGLGSKNQIF-EIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKG 663
Query: 229 CEPNVRTYSTLMHGLCEK----------------------------------GNVEEAFG 254
PN+ ++ L+ C+ G V EA
Sbjct: 664 ISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKE 723
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L + D +N LI L K +E +L +M KG + AS+ V+ GL
Sbjct: 724 LFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLG 783
Query: 315 DKKRFPEAKELVGRMI 330
+ + +A EL RM+
Sbjct: 784 KRGKKHDADELAERMM 799
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 103/196 (52%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
++ K G D +IL+ GLC+ G++ +Y+L E + PN+ +YS+L+HGLC
Sbjct: 305 VFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLC 364
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
G VE AF L +R++ +G D + ++I++ G + +E L M P++
Sbjct: 365 RAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAY 424
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++Y ++ EA E+ M+ + + P+ V+ L+HG N+ L+ + L K+
Sbjct: 425 NYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKV 484
Query: 365 VQQGFVPRMGMWREIV 380
Q G VP + +R I+
Sbjct: 485 RQFGVVPSLCTYRVII 500
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 129/298 (43%), Gaps = 2/298 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R PN Y+ +++ L +A R + ++ +R+K + D Y+++
Sbjct: 346 RNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKH--DHIVYSIVLHGCCQHLD 403
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ + DM +N P ++ ++ + E ++ G+ + I
Sbjct: 404 LEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTI 463
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G G + AF LD+ + P++ TY ++HGLC+ + +G+ M G
Sbjct: 464 LVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRG 523
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
DTV ++I+I G K ++E +L +M +G PN +Y ++ GL + PE
Sbjct: 524 YVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVM 583
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
L MI E ++P + Y LI C + ++ + ++M +G ++ ++G
Sbjct: 584 TLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIG 641
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 152/368 (41%), Gaps = 80/368 (21%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS---DGFFYNVIKIYGNMA-GRI 144
PN A Y + L AK+ + + +Q LC+ + + +N + I+G G++
Sbjct: 246 PNAATYATYLYGLCHAKQVKSAWNFLQM-----LCQRGYPCNNYCFNAV-IHGFCHDGQV 299
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLV---------------------------SAK 177
KAIE M P V +++++++ L S+
Sbjct: 300 HKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSL 359
Query: 178 LYGEIQG--------IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
L+G + ++ G + D +I+L G C++ +LE + + ++ N
Sbjct: 360 LHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNF 419
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
P+ YS+L++ C ++EA + E M S+GI + VT IL+ G +G + E
Sbjct: 420 VPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFL 479
Query: 290 LLERMKGKGCYPNSASYQEVLYGL----------------LDKKRFP------------- 320
L++++ G P+ +Y+ +++GL + + P
Sbjct: 480 FLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFV 539
Query: 321 ------EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
EA L +M+ E P+ +Y LI+GLC+ + +V + K M+ +G P
Sbjct: 540 KALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRI 599
Query: 375 MWREIVGC 382
++ ++ C
Sbjct: 600 LYTSLIAC 607
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 39/243 (16%)
Query: 164 KTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE 223
+ + V+ + V ++ + Y A K+GVE+ C N LLK L E + A + D+
Sbjct: 144 QVYATVIRVFVELSMFEDALVTYVEAKKVGVELQVC--NFLLKRLVEGNQIMYARSLFDD 201
Query: 224 FPKQNCEPNVRTYSTLM-------------------------------------HGLCEK 246
PNV +YS LM +GLC
Sbjct: 202 MKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHA 261
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
V+ A+ L+ + G + FN +I G G+V + +++ + MK G P+ SY
Sbjct: 262 KQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSY 321
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL + ++ M ++P+ VSY L+HGLC VE + K++
Sbjct: 322 SILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKD 381
Query: 367 QGF 369
QGF
Sbjct: 382 QGF 384
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 5/310 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + + + +Y+++++ Q + D+ + D + Y+ + IY
Sbjct: 380 KDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNF--VPDAYNYSSL-IYAYCRH 436
Query: 143 R-ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R + +A+E M S P+V T ++++ + L GE + GV C
Sbjct: 437 RQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTY 496
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+++ GLC+ + + + K+ P+ YS ++ G + +++EAF L +M
Sbjct: 497 RVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVD 556
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EG + T+ LI+GL K+ E M L + M G+G P+ Y ++ +
Sbjct: 557 EGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKA 616
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE-IV 380
A E+ M E +S Y LI G ++ +++M+ +G P + + + IV
Sbjct: 617 ALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIV 676
Query: 381 GCVTFGKDNR 390
G G + +
Sbjct: 677 GYFKIGDEKK 686
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 117/251 (46%), Gaps = 5/251 (1%)
Query: 126 SDGFFYNVIK----IYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
SDG NV+ ++G + G I +A L + + PS+ T+ ++++ L
Sbjct: 451 SDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPN 510
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
++ GI+ K G D +I++ G + +L+ AF + + + +PN+ TY++L+
Sbjct: 511 DMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLI 570
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
+GLC + E L + M EG+ D + + LI+ K+ ++ +++ M+ +G
Sbjct: 571 NGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLS 630
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
+S Y ++ G A+ + M+ + ++P+ V+Y LI G + +
Sbjct: 631 ADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAM 690
Query: 361 LKKMVQQGFVP 371
M+Q G P
Sbjct: 691 YNSMLQAGIAP 701
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 143/295 (48%), Gaps = 12/295 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI-----KIYG 138
R+ PN + ++IN L + + + D+M+ +KV + YN + K+ G
Sbjct: 216 RRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCS--PNVVSYNTLIDGYCKLGG 273
Query: 139 NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEID 197
N G++ KA L +M + P++ TFN++++ L G ++ ++ V+ +
Sbjct: 274 N--GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMK-VFKEMLDQDVKPN 330
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+ GLC G + A + D+ +PN+ TY+ L++G C+ ++EA +
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
++ +G T +N+LI K GK+++G L E M+ +G P+ +Y ++ GL
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
AK+L ++ + + P V++ L+ G C + +LK+M + G PR
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 117/232 (50%), Gaps = 2/232 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G+IS+AI M S P++ T+N ++N + E ++ S G
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ C+ G ++ F + +E ++ P+V TY+ L+ GLC GN+E A L +++
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+G+ D VTF+IL+ G ++G+ + LL+ M G P +Y V+ G +
Sbjct: 464 SKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Query: 321 EAKELVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A + +M E R+ + SY L+ G + +ED + +L +M+++G VP
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 3/224 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE---NGNLEAA 217
P+V TFN+V+N L + + + G + N L+ G C+ NG + A
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
VL E + + PN+ T++ L+ G + N+ + + + M + + + +++N LI+G
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L GK+ E + + ++M G PN +Y ++ G EA ++ G + + P+
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
Y LI C ++D + ++M ++G VP +G + ++
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 155/374 (41%), Gaps = 40/374 (10%)
Query: 20 SSASTITRKRTFALASPSASHQD--------SDHHAYKLN-HKDWLSPTEVLK-IFSNLR 69
SS+STIT SP D H KL H ++P E+ + + S+
Sbjct: 27 SSSSTIT-------GSPCPPRYDVAVIADLIEKQHWSKLGVHVTDINPNELFRQLISSEL 79
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
DP + + K D + + L +++ LA AKR+ I F DGF
Sbjct: 80 DPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRS------------FLDGF 127
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
N + +I M C S+ LVL +++ + + +
Sbjct: 128 VRN-------GSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEA-FKRS 179
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G ++ A L+ L + YV E ++ +PNV T++ +++ LC+ G +
Sbjct: 180 GYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKM 239
Query: 250 EEAFGLLERMESEGIDADTVTFNILISG---LRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+A ++E M+ G + V++N LI G L GK+ + +L+ M PN ++
Sbjct: 240 NKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTF 299
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ G P + ++ M+ + + P+ +SY LI+GLCN + + + KMV
Sbjct: 300 NILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVS 359
Query: 367 QGFVPRMGMWREIV 380
G P + + ++
Sbjct: 360 AGVQPNLITYNALI 373
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 6/235 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
PN Y +IN + D+ +K + + YN +I Y + G+I
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR--MYNMLIDAYCKL-GKIDDG 420
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M P V T+N ++ L + ++ G+ D +IL++G
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEG 479
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-IDA 266
C G A +L E K +P TY+ +M G C++GN++ A + +ME E +
Sbjct: 480 YCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRM 539
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ ++N+L+ G ++GK+E+ LL M KG PN +Y+ V ++D+ P+
Sbjct: 540 NVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
>gi|302765375|ref|XP_002966108.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
gi|300165528|gb|EFJ32135.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
Length = 382
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 3/221 (1%)
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M S N P++ +++++ L AK ++ + + G+ D +LL GL +
Sbjct: 3 EMRSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWKEK 62
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
L+ A +L E CEPNV TY++L+ GLC+ + A L E M+S + VT+N
Sbjct: 63 RLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVEC-SPLVTYN 121
Query: 273 ILISGLRKQGKVEEGM--KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
L+ GL GK+E M +LLE MK +GC P+ + ++ GL + + A E++ M+
Sbjct: 122 TLLDGLFWTGKLESAMAVELLESMKARGCSPDVITSTILVDGLCKESKVAAAWEVLCEML 181
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P+ V+ K L+HGLC + V D +++ M +G P
Sbjct: 182 DAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCRGCTP 222
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN L +++I+ L +AKR + + ++ + +D Y V+ R+ +A+
Sbjct: 11 PNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGI--VADTVIYTVLLSGLWKEKRLDQAL 68
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLV-------SAKLYGEIQGIYTSAAKLGVEIDACCL 201
L +M + C P+V T+N +++ L + +L+ ++ + S
Sbjct: 69 AILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPLVT--------Y 120
Query: 202 NILLKGLCENGNLEAAFYV--LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N LL GL G LE+A V L+ + C P+V T + L+ GLC++ V A+ +L M
Sbjct: 121 NTLLDGLFWTGKLESAMAVELLESMKARGCSPDVITSTILVDGLCKESKVAAAWEVLCEM 180
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G + VT L+ GL + +V + + L+ M +GC PN +Y ++ GL R
Sbjct: 181 LDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRV 240
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+A L M + V+Y LI GLC V++ +L +MV+ G
Sbjct: 241 KDAGNLYEVMTGDGCDADVVTYSTLIDGLCKGGRVDEAHLLLARMVRMG 289
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 119/265 (44%), Gaps = 18/265 (6%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK--- 146
+ +YT++++ L + KR D I+ ++ G NV+ Y ++ + K
Sbjct: 47 DTVIYTVLLSGLWKEKRLDQALAILHEMR-------DHGCEPNVVT-YNSLIDGLCKNNE 98
Query: 147 ---AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ-GIYTSAAKLGVEIDACCLN 202
A E M S C P V L+ L + KL + + S G D
Sbjct: 99 PDRAQELFEHMKSVECSPLVTYNTLLDGLFWTGKLESAMAVELLESMKARGCSPDVITST 158
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ GLC+ + AA+ VL E C PN+ T +L+HGLC V +A L+ M
Sbjct: 159 ILVDGLCKESKVAAAWEVLCEMLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCR 218
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + VT+ LI GL K G+V++ L E M G GC + +Y ++ GL R EA
Sbjct: 219 GCTPNVVTYGTLIDGLCKVGRVKDAGNLYEVMTGDGCDADVVTYSTLIDGLCKGGRVDEA 278
Query: 323 KELVGRMICERM-SPSFVSYKKLIH 346
L+ RM+ RM +PS L H
Sbjct: 279 HLLLARMV--RMGTPSSTLTYNLQH 301
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
DE N PN+ S L+ GLC+ + M+ GI ADTV + +L+SGL K+
Sbjct: 2 DEMRSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWKE 61
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
++++ + +L M+ GC PN +Y ++ GL A+EL M SP V+Y
Sbjct: 62 KRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSP-LVTY 120
Query: 342 KKLIHGL 348
L+ GL
Sbjct: 121 NTLLDGL 127
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 8/208 (3%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+++ A E L +M C P++ T +L+ L A+ + + G +
Sbjct: 169 KVAAAWEVLCEMLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 228
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC+ G ++ A + + C+ +V TYSTL+ GLC+ G V+EA LL RM
Sbjct: 229 TLIDGLCKVGRVKDAGNLYEVMTGDGCDADVVTYSTLIDGLCKGGRVDEAHLLLARMVRM 288
Query: 263 GIDADTVTFNI--LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK-KRF 319
G + T+T+N+ + K +E+GM + + KG Y L + K
Sbjct: 289 GTPSSTLTYNLQHFEGKMVKVDSLEKGMAIHIQAAEKG-YKRDDFLSNTLVDMYAKCGSM 347
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHG 347
EA+ + M C S VS+ L+ G
Sbjct: 348 VEAERVFRSMPCH----SLVSWTVLMLG 371
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ M S + + +ILI GL K + + ++ M+G G ++ Y +L GL +
Sbjct: 2 DEMRSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWKE 61
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
KR +A ++ M P+ V+Y LI GLC
Sbjct: 62 KRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 94
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 90/221 (40%), Gaps = 18/221 (8%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD-GFFYNVIKIYGNMA 141
K + +P+ T++++ L + + A ++ LC D G N++ +
Sbjct: 146 KARGCSPDVITSTILVDGLCKESKVAAAWEV--------LCEMLDAGCVPNLVTSKSLLH 197
Query: 142 G-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G R+S A+ + DM C P+V T+ +++ L + +Y G +
Sbjct: 198 GLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAGNLYEVMTGDGCDA 257
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH---GLCEKGNVEEAF 253
D + L+ GLC+ G ++ A +L + + TY+ L H + + ++E+
Sbjct: 258 DVVTYSTLIDGLCKGGRVDEAHLLLARMVRMGTPSSTLTYN-LQHFEGKMVKVDSLEKGM 316
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
+ + +G D N L+ K G + E ++ M
Sbjct: 317 AIHIQAAEKGYKRDDFLSNTLVDMYAKCGSMVEAERVFRSM 357
>gi|15219274|ref|NP_175740.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192173|sp|Q9MAG8.1|PPR79_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g53330
gi|7769859|gb|AAF69537.1|AC008007_12 F12M16.23 [Arabidopsis thaliana]
gi|332194805|gb|AEE32926.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 471
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 160/326 (49%), Gaps = 13/326 (3%)
Query: 58 PTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI 117
P+ +K+F N DP S + ++ + + Y +II KL +K FD ++ ++ +
Sbjct: 22 PSAAMKLFRN-PDPEST-------NPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHL 73
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRI-SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
K + ++ F NVI +G G++ S+A+ +MP Y C +VK+ N +L+ L+
Sbjct: 74 KTDTRIVPTEIIFCNVINFFGR--GKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKC 131
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+++ +S + G + DAC NIL+ G ++G + A + DE K+ +P T+
Sbjct: 132 GELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTF 190
Query: 237 STLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
TL+HGLC+ V+EA + M + G+ + LI L + G++ KL +
Sbjct: 191 GTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAY 250
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
++A Y ++ L+ R E ++ M + P V+Y LI+G C + E
Sbjct: 251 EGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSE 310
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIVG 381
+ VL +MV++G P + + I+G
Sbjct: 311 SANRVLDEMVEKGLKPDVISYNMILG 336
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 116/248 (46%), Gaps = 3/248 (1%)
Query: 127 DGFFYNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D YN++ I+G + +G A++ +M P+ TF +++ L E +
Sbjct: 151 DACTYNIL-IHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 186 YTSAAKL-GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
K+ GV L+K LC+ G L AF + DE + + + YSTL+ L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ G E +LE M +G DTVT+N+LI+G + E ++L+ M KG P+
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
SY +L K++ EA L M SP +SY+ + GLC E+ +L +M
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 365 VQQGFVPR 372
+ +G+ PR
Sbjct: 390 LFKGYKPR 397
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 145/311 (46%), Gaps = 17/311 (5%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFY 131
+S ++++ K P+ Y ++I+ +Q+ FD + D M + KV+ G +
Sbjct: 141 LSSIDEFGK-----PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVK-----PTGVTF 190
Query: 132 NVIKIYGNMA-GRISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+ I+G R+ +A++ DM Y P+V + ++ L + A
Sbjct: 191 GTL-IHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEA 249
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ +++DA + L+ L + G +L+E ++ C+P+ TY+ L++G C + +
Sbjct: 250 YEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDS 309
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E A +L+ M +G+ D +++N+++ + K EE L E M +GC P++ SY+ V
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
GL + +F EA ++ M+ + P + + LC +E + V+ + +G
Sbjct: 370 FDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGI 428
Query: 370 VPRMGMWREIV 380
+W ++
Sbjct: 429 AGDADVWSVMI 439
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 38/336 (11%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
L + I+ L ++ D E Q +K + + YN++ RI +AI+
Sbjct: 68 LVNITIDSLCKSDMIDKAESWFQELKDFR--GLVNTVSYNILINAFCKTKRIDEAIQLFG 125
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M + C PS T+N ++ L + GE Q Y G NIL+ G C+
Sbjct: 126 EMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKAD 185
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+ A +L+E + Y+ ++ L +KG + EA RME +G+ VTF
Sbjct: 186 RVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFT 245
Query: 273 ILISGLRKQ-----------------------------------GKVEEGMKLLERMKGK 297
+LI GL K G V+E ++ E M +
Sbjct: 246 VLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNR 305
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
GC PN S ++ GL KR +A+E+ ++ + P V+Y + GLC V+
Sbjct: 306 GCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQA 365
Query: 358 DWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNR 392
VL +V +G P + M+ ++ G + G+ + R
Sbjct: 366 RQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEAR 401
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 137/306 (44%), Gaps = 21/306 (6%)
Query: 62 LKIFSNLRDPISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKR 106
LK F L + +S ++N + K K + P+ + Y +I L + +R
Sbjct: 92 LKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVER 151
Query: 107 FDAIEDIMQRIKVEKLCRFSDGFF--YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVK 164
+ +R+ L + F YN++ A R+ +A+E L ++ + +
Sbjct: 152 LGEAQQFYERL----LSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSA 207
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
+N +++ L E + + K GV +L+ GLC+ + A + +
Sbjct: 208 PYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSY 267
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ P+V S LM G C+ G V+EA+ + E M + G + V+ NILI+GL K ++
Sbjct: 268 LESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRL 327
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ ++ E + + P+ +Y + GL R +A++++ ++ + +P V Y L
Sbjct: 328 SQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTAL 387
Query: 345 IHGLCN 350
I GLC+
Sbjct: 388 ISGLCS 393
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A R+++A E F PSV + +++ E I+ G +
Sbjct: 254 ANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVS 313
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ GLC+ L A V +E K+ +P+V TYST M GLC V++A +L +
Sbjct: 314 CNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLV 373
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLE-RMKGKGCYPNSASYQEVLYGLLDKKRF 319
+G D V + LISGL G+++E K+ E M+ GC PN+ + ++ G R
Sbjct: 374 DKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRL 433
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIH 346
EA+EL R + + P ++ + +
Sbjct: 434 DEARELFQRFVERGVQPDCRTFSAMAN 460
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 38/161 (23%)
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM-------- 294
LC G ++EA L + S+G + ++L+ L K G+ EE +K+++ M
Sbjct: 9 LCHVGKLDEALELFHSLVSDGCG---LPADLLVRELSKAGRAEECLKVVKLMLDRQQLRE 65
Query: 295 ------------------KGKGCYP---------NSASYQEVLYGLLDKKRFPEAKELVG 327
K + + N+ SY ++ KR EA +L G
Sbjct: 66 RHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFG 125
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
M +PS +Y LI GLC + + + ++++ G
Sbjct: 126 EMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSG 166
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 139/338 (41%), Gaps = 53/338 (15%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-- 142
+++ P+ YT +I+ L +A F+ D + R++ + NV+ + G
Sbjct: 296 ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMR-------ATSCLPNVVTYSTLLCGCL 348
Query: 143 ---RISKAIETLFDMPSYNCWPSVKTFN-------------------------------L 168
++ + L M C+PS K FN +
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 169 VLNLLVSA----------KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
V N+L+ + L + Y+ GV ++ ++ + LC G E AF
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
V+ E Q P+ TYS +++ LC +E AF L E M+ G+ AD T+ I++
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G +E+ K M+ GC PN +Y +++ L K+ A EL M+ E P+
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
V+Y LI G C VE + ++M VP + M+
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 143/308 (46%), Gaps = 18/308 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + Y+ ++N L A + + + + +K L +D + Y ++ AG I +A
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL--VADVYTYTIMVDSFCKAGLIEQAR 538
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +M C P+V T+ +++ + AK ++ + G + + L+ G
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 209 CENGNLEAAFYV------------LDEFPKQ---NCE-PNVRTYSTLMHGLCEKGNVEEA 252
C+ G +E A + +D + KQ N E PNV TY L+ G C+ VEEA
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LL+ M EG + + + ++ LI GL K GK++E ++ M G +Y ++
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
KR A +++ +M+ +P+ V Y ++I GLC ++ +++ M ++G P
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778
Query: 373 MGMWREIV 380
+ + ++
Sbjct: 779 VVTYTAMI 786
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 140/339 (41%), Gaps = 40/339 (11%)
Query: 53 KDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIED 112
++ LS + V+++ + P +VIS ++ Y +Y +++ + + E+
Sbjct: 127 REKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEE 186
Query: 113 IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
+Q+I+ + F G F NV+ G S A+E L + + PS T+N
Sbjct: 187 FLQQIRDDDKEVF--GEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN----- 239
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
C + LK L++A + E N +
Sbjct: 240 --------------------------CLIQAFLKA----DRLDSASLIHREMSLANLRMD 269
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
T + LC+ G EA L+E +E DTV + LISGL + EE M L
Sbjct: 270 GFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
RM+ C PN +Y +L G L+KK+ K ++ M+ E PS + L+H C
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRN 391
+LKKMV+ G +P ++ ++G + KD+ N
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 425
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 142/314 (45%), Gaps = 28/314 (8%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGNM-AG 142
PN YT +I+ +AK+ ++ + + S+G N++ I G+ AG
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETM-------LSEGCLPNIVTYSALIDGHCKAG 602
Query: 143 RISKAIETLF------DMPSYNCW----------PSVKTFNLVLNLLVSAKLYGEIQGIY 186
++ KA + D+P + + P+V T+ +L+ + E + +
Sbjct: 603 QVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 662
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ + G E + + L+ GLC+ G L+ A V E + + TYS+L+ +
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 722
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+ A +L +M + V + +I GL K GK +E KL++ M+ KGC PN +Y
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 782
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ G + EL+ RM + ++P++V+Y+ LI C ++ +L++M Q
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 367 QGFVPRMGMWREIV 380
+ +R+++
Sbjct: 843 THWPTHTAGYRKVI 856
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 129/281 (45%), Gaps = 7/281 (2%)
Query: 78 LNQYSKRKDYN---PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++ Y K+ D N PN Y +++ ++ R + ++ + +E C + Y+ +
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG-CE-PNQIVYDAL 680
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G++ +A E +M + ++ T++ +++ K + + +
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ ++ GLC+ G + A+ ++ ++ C+PNV TY+ ++ G G +E
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LLERM S+G+ + VT+ +LI K G ++ LLE MK ++A Y++V+ G
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF- 859
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
K F E+ L+ + + +P Y+ LI L + +E
Sbjct: 860 -NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLE 899
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 23/255 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +YT +I+ L + + D +MQ ++ EK C+ + + +I +G M G+I +
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMME-EKGCQPNVVTYTAMIDGFG-MIGKIETCL 799
Query: 149 ETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
E L M S P+ T+ ++++ L V+ L E++ + G
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK----- 854
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME- 260
+++G N + +LDE + + P + Y L+ L + +E A LLE +
Sbjct: 855 --VIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 261 -SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S + + T+N LI L KVE +L M KG P S+ ++ GL +
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970
Query: 320 PEA---KELVGRMIC 331
EA + + M+C
Sbjct: 971 SEALLLLDFISHMVC 985
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 124/250 (49%), Gaps = 1/250 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ +A L M P V T+ +++ K + + I+ + A+ GV +
Sbjct: 280 GRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSY 339
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NI++ G C+ ++ A + E +N P+V TY++L+ GLC+ G + A L++ M
Sbjct: 340 NIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHD 399
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D +T+N ++ L K +V++ + LL +MK +G P+ +Y ++ GL R +
Sbjct: 400 RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKD 459
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A+ + ++ + + + +Y +I G C+ L + +L KM G +P + EI+
Sbjct: 460 AQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTY-EIII 518
Query: 382 CVTFGKDNRN 391
F KD +
Sbjct: 519 LSLFEKDEND 528
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 25/300 (8%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD-----GFFYNVIKIYG 138
+K Y PN T +I L + ++ + F D GF N + YG
Sbjct: 119 KKGYEPNAITLTTLIKGLCL------------KGQIHQALHFHDKVVALGFHLNKV-CYG 165
Query: 139 NM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ G+ S A++ L + P+V +N +++ + KL E +Y+
Sbjct: 166 TLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK 225
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+ D + L+ G C G L A + ++ + P+V T+S L+ G C++G V+EA
Sbjct: 226 GISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEA 285
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+L M +GI D VT+ L+ G +V + + M G N SY ++ G
Sbjct: 286 KNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMING 345
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
K+ EA L M C+ + P V+Y LI GLC + ++ +M +G VP
Sbjct: 346 FCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG-VPH 404
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 102/223 (45%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
N P + F +L LV Y ++ G+ D NIL+ + G+ +
Sbjct: 51 NPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFS 110
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
F V K+ EPN T +TL+ GLC KG + +A +++ + G + V + LI+G
Sbjct: 111 FSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLING 170
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L K G+ ++LL R+ GK PN Y ++ + K EA +L M+ + +SP
Sbjct: 171 LCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPD 230
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+Y LI G C + D + KM+ + P + + +V
Sbjct: 231 VVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILV 273
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
TFN+++N ++ + K G E +A L L+KGLC G + A + D+
Sbjct: 93 TFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKV 152
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
N Y TL++GLC+ G A LL R++ + + + V +N +I + K V
Sbjct: 153 VALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 212
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
E L M KG P+ +Y ++ G + +A L +MI E ++P ++ L
Sbjct: 213 NEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSIL 272
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ G C + V++ VL M++QG P
Sbjct: 273 VDGFCKEGRVKEAKNVLAMMMKQGIKP 299
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 140/293 (47%), Gaps = 16/293 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIM-----QRIK--VEKLCRFSDGFFYNVIKIY 137
++ NP+ ++++++ + R ++++ Q IK V C DG Y ++K
Sbjct: 260 EEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDG--YCLVK-- 315
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+++KA M +V+++N+++N K E ++ + D
Sbjct: 316 -----QVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPD 370
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+ GLC++G + A ++DE + + TY++++ LC+ V++A LL
Sbjct: 371 VVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLT 430
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+M+ EGI D T+ ILI GL K G++++ + E + KG +Y ++ G D
Sbjct: 431 KMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDND 490
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
F +A L+ +M P+ +Y+ +I L + + + +L++M+ +G +
Sbjct: 491 LFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 96/187 (51%)
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
V+ + N ++ +C+ + AF + E + P+V TYS L+ G C G + +A
Sbjct: 192 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAI 251
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
GL +M SE I+ D TF+IL+ G K+G+V+E +L M +G P+ +Y ++ G
Sbjct: 252 GLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGY 311
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
K+ +AK + M ++ + SY +I+G C K V++ + K+M + +P +
Sbjct: 312 CLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDV 371
Query: 374 GMWREIV 380
+ ++
Sbjct: 372 VTYNSLI 378
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 116/242 (47%), Gaps = 4/242 (1%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D Y + AGR+ A M K +N+++ K E +
Sbjct: 352 DAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELL 411
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
++G+ D C N LL G C+ G+ A +L + C+P+V T+ TL+HG C+
Sbjct: 412 QEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKV 471
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G ++EA +L M+ GI + V +N LI L K+G V+ ++L + MK K N ++
Sbjct: 472 GKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTF 531
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+L GL DK +A EL+ +M ER P +V+ L+ L ++ + D LK+ +Q
Sbjct: 532 NALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL---PVIGETDR-LKRFMQ 587
Query: 367 QG 368
QG
Sbjct: 588 QG 589
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 140/310 (45%), Gaps = 5/310 (1%)
Query: 75 ISVLNQYSKRK-DYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYN 132
+ VL+ S++ D P+ +++ L ++ R +A+ + QR+ C + YN
Sbjct: 192 LRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCP-PNTVTYN 250
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ G IS A E + M + ++ T N ++ L A G + +
Sbjct: 251 CLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTV 310
Query: 193 GVEI--DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
E +A + L+ L N+ A + E + P+ Y T++ GL + G +E
Sbjct: 311 WPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLE 370
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A + M+ G DT +NILI+G ++ ++ E +LL+ MK G P+ +Y +L
Sbjct: 371 DACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLL 430
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
G F EL+G+MI + PS +++ L+HG C +++ +L+ M + G
Sbjct: 431 SGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIH 490
Query: 371 PRMGMWREIV 380
P ++ ++
Sbjct: 491 PNNVIYNTLI 500
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+E + S P + +++ L A + + +S + G ++D NI
Sbjct: 334 VGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNI 393
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C L A+ +L E + P+V TY+TL+ G C+ G+ LL +M +G
Sbjct: 394 LIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDG 453
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+TF L+ G K GK++E +++L M G +PN+ Y ++ L + A
Sbjct: 454 CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAI 513
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EL M + + + ++ L+ GL ++ + E ++ +M ++ P
Sbjct: 514 ELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFP 561
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 21/283 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK---IYGNM--AGR 143
PN Y +I+ + +++++++ E G N++ I G + AGR
Sbjct: 244 PNTVTYNCLIDAFCRVGNISMAYELVEKMENE-------GVPQNIVTLNTIVGGLCRAGR 296
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY----GEIQGIYTSAAKLGVEIDAC 199
A+E F WP K + + LV A L+ G ++ G DA
Sbjct: 297 TGAALE--FFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAI 354
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
++ GL + G LE A + + + + + Y+ L+ G C K + EA+ LL+ M
Sbjct: 355 MYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEM 414
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ GI D T+N L+SG K G +LL +M GC P+ ++ +++G +
Sbjct: 415 KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKI 474
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
EA ++ M + P+ V Y LI LC + DVD ++
Sbjct: 475 DEALRILRSMDESGIHPNNVIYNTLIDFLCKRG---DVDLAIE 514
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 96/238 (40%), Gaps = 53/238 (22%)
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN------- 228
A++Y +QG + V D IL+ GLC+ G + A VLD +Q+
Sbjct: 156 ARIYALMQGCAS------VRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDV 209
Query: 229 --------------------------------CEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
C PN TY+ L+ C GN+ A+ L+
Sbjct: 210 VTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELV 269
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK-----GKGCYPNSASYQEVLY 311
E+ME+EG+ + VT N ++ GL + G+ ++ + GKG N+ +Y ++
Sbjct: 270 EKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKG---NAVTYSTLVG 326
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
LL A EL + E SP + Y +I GL +ED + M + GF
Sbjct: 327 ALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGF 384
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 49/279 (17%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L D S+ S + K + + Y ++I + KR +++Q +K ++ D
Sbjct: 369 LEDACSMASSM----KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK--EVGIRPD 422
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
YN + AG + E L M C PSV TF
Sbjct: 423 VCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITF--------------------- 461
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
L+ G C+ G ++ A +L + PN Y+TL+ LC++G
Sbjct: 462 --------------GTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRG 507
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+V+ A L + M+ + + A+ TFN L+ GLR + E+ +L+++M+ + C+P+ +
Sbjct: 508 DVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVD 567
Query: 308 EVL-----YGLLDK-KRFPEAKELVG--RMICERMSPSF 338
++ G D+ KRF + E R++ +R S F
Sbjct: 568 VLMEWLPVIGETDRLKRFMQQGEHTASKRIVSDRTSAYF 606
>gi|357441367|ref|XP_003590961.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480009|gb|AES61212.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 573
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 114/224 (50%)
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S+A+E L DM C P + +N ++N Y + + ++ G++ + NIL
Sbjct: 267 SRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNIL 326
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ L +G + +L + + P + TY+ L++ LC+ G ++ + L +M SE
Sbjct: 327 IHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENC 386
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VT+N L++ L K+G ++E ++LL + G C P +Y V+ GL + AKE
Sbjct: 387 SPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKE 446
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ G M+ + + P +++++ L+ GLC E+ + K M + G
Sbjct: 447 MYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFKVMHRIG 490
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 100/206 (48%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P++ T+N++LN L + +Y D N LL LC+ G ++ + +
Sbjct: 353 PTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQL 412
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L NC P + TY+ +++GL +++ A + M +GID D +T L+ GL +
Sbjct: 413 LHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQ 472
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+ EE +++ + M G +Y+ V+ GL ++K+ A + + M+ + P
Sbjct: 473 VYQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVKAQCKPDGKI 532
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQ 366
Y L+ + N+ +V + + + +++++
Sbjct: 533 YYTLLKSVANEGMVNEANDLHQRLIE 558
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L+ LC G L AA +++ + + P+ + + L+ GL G V++ ++ M
Sbjct: 114 NKILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNMMVM 173
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G DT+TFN +I L K+G ++ ++ LE M GC P++ +Y ++ + DK
Sbjct: 174 SGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNL 233
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A + + P ++Y L+ +C VL+ M ++G P + M+ +V
Sbjct: 234 AVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLV 292
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 83/177 (46%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N ++ LC+ G+L++A L+ C P+ +TY+T++ + +KG+ A
Sbjct: 179 DTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFW 238
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ +G +T+ +L+ + K +++LE M +GC P+ Y ++ +
Sbjct: 239 KDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQ 298
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ + ++ ++ M P+ V+Y LIH L + VD +LK M + P +
Sbjct: 299 GNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTL 355
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/132 (20%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E + + +T N ++ L +GK+ +L+E M P+ S ++ GL+ +
Sbjct: 102 EGQFVRNGELTSNKILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQV 161
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+ +++ M+ P +++ +I LC + ++ L+ M G +P + I
Sbjct: 162 DKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTI 221
Query: 380 VGCVTFGKDNRN 391
+ C+ F K + N
Sbjct: 222 IRCI-FDKGDPN 232
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 5/209 (2%)
Query: 126 SDGFF-----YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
SDG YN++ AG + +A+ET+ M P++ TFN ++N +
Sbjct: 418 SDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVH 477
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ + + G+ D L+ GLC L+ AF E + PNV+TY+ L+
Sbjct: 478 DAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLI 537
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
HGLC G+V +A LL +M+ +GI D +FN I + K+E+ KL M G
Sbjct: 538 HGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVS 597
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRM 329
P+S +Y ++ L D++R EAKE++ M
Sbjct: 598 PDSYTYNALIKALCDERRVDEAKEIILAM 626
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 107/204 (52%), Gaps = 8/204 (3%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
++ +LG+ N ++ G ++AA+ + P C P+ TY+TL+HG+C
Sbjct: 167 VFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVC 226
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+G V+EA L+++ME GI + VT+ +L+ G +VEE + +LERMK KG A
Sbjct: 227 RRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEA 286
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERM--SPSF--VSYKKLIHGLCNQKLVEDVDWV 360
+Y+ +++G R E KE RM+ E + P+ ++Y L++ L + ++ +
Sbjct: 287 TYRSLVHGAF---RCLE-KERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVEL 342
Query: 361 LKKMVQQGFVPRMGMWREIVGCVT 384
KKM ++G++ + ++ C
Sbjct: 343 AKKMSKRGYLLGSTTFSIVIPCAV 366
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 6/224 (2%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACC 200
ISKA + M S SV+++N+V++ A GE++ + + G +
Sbjct: 406 ISKANKYFSQMVSDGLLSSVESYNIVIDCFAKA---GEVERALETIKVMQESGFSPNLVT 462
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G + GN+ A L + P+V T+++L+ GLC +++AF M
Sbjct: 463 FNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMS 522
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ + T+N+LI GL G V + ++LL +MK G P++ S+ + ++
Sbjct: 523 EWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIE 582
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+A++L M +SP +Y LI LC+++ V++ ++ M
Sbjct: 583 KAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAM 626
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NI++ + G +E A + + PN+ T++TL++G + GNV +A L+ +
Sbjct: 429 NIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVME 488
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D +TF LI GL ++++ M G PN +Y +++GL +
Sbjct: 489 HGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSK 548
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A EL+ +M + ++P S+ I C + +E + M + G P
Sbjct: 549 AIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSP 598
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 89/172 (51%), Gaps = 7/172 (4%)
Query: 183 QGIYTSAAKLGVEIDACCLNI---LLKGLCEN-GNLEAAFYVLDEF---PKQNCEPNVRT 235
+G +A L ++ +C + LL L E+ G L A Y + F P+ P+
Sbjct: 123 RGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAI 182
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y+ ++ G V+ A+ ++M ++G D T+N L+ G+ ++G V+E ++L+++M+
Sbjct: 183 YNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQME 242
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
G PN +Y ++ G + R EA ++ RM + +S + +Y+ L+HG
Sbjct: 243 RAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHG 294
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 106/239 (44%), Gaps = 7/239 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF--FYNVIKIYGNMAGRISKAIETL 151
Y ++I+ A+A +E ++ IKV + FS F +I Y + G + A L
Sbjct: 428 YNIVIDCFAKAGE---VERALETIKVMQESGFSPNLVTFNTLINGYLKL-GNVHDAKAFL 483
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+ + P V TF +++ L + ++ ++ GV + N+L+ GLC
Sbjct: 484 KMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSA 543
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G++ A +L++ P+ +++ + C +E+A L M G+ D+ T+
Sbjct: 544 GHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTY 603
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCY-PNSASYQEVLYGLLDKKRFPEAKELVGRM 329
N LI L + +V+E +++ M+ C +Y V+ L RF EA + ++
Sbjct: 604 NALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRFSEAGMFMNKL 662
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+V +Y+ ++ + G VE A ++ M+ G + VTFN LI+G K G V + L
Sbjct: 424 SVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFL 483
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ + G P+ ++ ++ GL + +A M + P+ +Y LIHGLC+
Sbjct: 484 KMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSA 543
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
V +L KM G P
Sbjct: 544 GHVSKAIELLNKMKMDGITP 563
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 110/270 (40%), Gaps = 8/270 (2%)
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
++V +L YN + AG + A MP+ C P T+N +++ +
Sbjct: 169 VQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRR 228
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ E + + G+ + +L+ G C +E A VL+ ++ TY
Sbjct: 229 GIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATY 288
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDAD----TVTFNILISGLRKQGKVEEGMKLLE 292
+L+HG E A+ RM SE I++D ++ ++ L+ L K +E ++L +
Sbjct: 289 RSLVHGAFRCLEKERAY----RMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAK 344
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+M +G S ++ V+ + + ELV I + + F Y +I K
Sbjct: 345 KMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCK 404
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
+ + +MV G + + + ++ C
Sbjct: 405 DISKANKYFSQMVSDGLLSSVESYNIVIDC 434
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%)
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
CE + L+ G A + ++ G+ T +N +I+ + G V+
Sbjct: 140 GCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAA 199
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
++M GC P+ +Y +++G+ + EA LV +M + P+ V+Y L+ G
Sbjct: 200 YLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDG 259
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
CN VE+ VL++M ++G +R +V
Sbjct: 260 FCNASRVEEAVCVLERMKEKGVSATEATYRSLV 292
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 120/331 (36%), Gaps = 77/331 (23%)
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
C S+ +++ +G + G A E +P PS +N V+ V A G +
Sbjct: 141 CEVSEELLCALVESWGRL-GLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRA---GAV 196
Query: 183 QGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
Y ++ G D N L+ G+C G ++ A ++ + + PNV TY+ L
Sbjct: 197 DAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTML 256
Query: 240 MHGLCEKGNVEEAFGLLERME-------------------------------SEGIDAD- 267
+ G C VEEA +LERM+ SE I++D
Sbjct: 257 VDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDP 316
Query: 268 ---TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS------------------- 305
++ ++ L+ L K +E ++L ++M +G S +
Sbjct: 317 TLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCE 376
Query: 306 ----------------YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
Y ++ L K +A + +M+ + + S SY +I
Sbjct: 377 LVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFA 436
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
VE +K M + GF P + + ++
Sbjct: 437 KAGEVERALETIKVMQESGFSPNLVTFNTLI 467
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 136/306 (44%), Gaps = 18/306 (5%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK-----IY 137
+R PN YT++++ A R + +++R+K EK ++ + +++ +
Sbjct: 242 ERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMK-EKGVSATEATYRSLVHGAFRCLE 300
Query: 138 GNMAGR-ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
A R +S+ IE+ + S ++ +L L + E + +K G +
Sbjct: 301 KERAYRMLSEWIESDPTLHSI-------AYHTLLYCLSKNDMDKEAVELAKKMSKRGYLL 353
Query: 197 DACCLNILLKGLCENGNLEAA--FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ +I++ C LE++ ++D+F K+ Y ++ ++ +A
Sbjct: 354 GSTTFSIVIP--CAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANK 411
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+M S+G+ + ++NI+I K G+VE ++ ++ M+ G PN ++ ++ G L
Sbjct: 412 YFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYL 471
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+AK + ++ + P +++ LI GLC+ ++D +M + G P +
Sbjct: 472 KLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQ 531
Query: 375 MWREIV 380
+ ++
Sbjct: 532 TYNVLI 537
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 1/219 (0%)
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
VL L+ K + + G Y + G NIL+ C++G++ A V D K
Sbjct: 113 VLEHLMKLKYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWG 172
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
P+V +Y+TLM+G G+++E F L M + G+ D T+++LI+GL K+ K+++
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDAN 232
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+L + M KG PN ++ ++ G R A E+ +M+ + + P ++Y LI+GL
Sbjct: 233 ELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGL 292
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
C + ++ + ++ +M +G P + ++ GC G
Sbjct: 293 CKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEG 331
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 122/252 (48%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+F+N++ G I A + + PSV ++N ++N + E + ++
Sbjct: 143 YFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 202
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 203 MXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGR 262
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V+ A + ++M S+ + D +T+N LI GL K+G +++ L+ M KG P+ +Y
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTT 322
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + A E RMI E + V+Y LI GLC + D + +L+ M+ G
Sbjct: 323 LIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVG 382
Query: 369 FVPRMGMWREIV 380
P + I+
Sbjct: 383 LKPDAXTYTMII 394
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 110/218 (50%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P V T+++++N L + ++ G+ + L+ G C+NG
Sbjct: 203 MXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGR 262
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + + Q+ P++ TY+ L++GLC+KG++++A L+ M +G+ D +T+
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTT 322
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+G ++ + RM + + +Y ++ GL + R +A++++ M+
Sbjct: 323 LIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVG 382
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P +Y +I+ C + V +LK+M + G VP
Sbjct: 383 LKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 81/151 (53%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ GLC+ G+L+ A ++ E + +P+ TY+TL+ G C++GN++ AF
Sbjct: 281 DLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHR 340
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
RM E I D V + LISGL ++G+ + K+L M G P++ +Y ++ K
Sbjct: 341 XRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKK 400
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+ +L+ M + PS V+Y L++G
Sbjct: 401 GDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|255661008|gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 369
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 2/262 (0%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN + AGRI E L++M SV +FN+++ L E+ I+
Sbjct: 24 DAVVYNAMLNGFYRAGRIKDCFE-LWEMMGREGNRSVASFNIMMRGLFDNGRVDEVNSIW 82
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
K G D+ IL+ G C+NG + + VL+ ++ + YS +++GLC++
Sbjct: 83 ELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETAERKGGVLDAFAYSAMINGLCKE 142
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+E+A +L M G +T +N LI+GL K E+ +++ M C P +Y
Sbjct: 143 TKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGITHCSPTIVTY 202
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL +RF EA +LV M+ + ++PS ++Y L+ GLC +E + ++ +
Sbjct: 203 NILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKIEMALQLWNQVTK 262
Query: 367 QGFVPRMGMWREIV-GCVTFGK 387
GF P + M ++ G + GK
Sbjct: 263 NGFKPDVQMHNTLIHGLCSVGK 284
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ KAI L M C P+ +N ++N L+ A + ++ N
Sbjct: 144 KLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGITHCSPTIVTYN 203
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ GLC++ A+ ++ E ++ P+V TYS LM GLC +E A L ++
Sbjct: 204 ILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKIEMALQLWNQVTKN 263
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D N LI GL GK + + L M C PN + ++ G A
Sbjct: 264 GFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLVTQNTLMEGFYKDGDMRNA 323
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ R++ + P +SY + GLC+ + D L V++
Sbjct: 324 LVIWARILKNELQPDIISYNITLKGLCSCNRISDAILFLNDAVRK 368
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 115/244 (47%), Gaps = 4/244 (1%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
+ ++RK + Y+ +IN L + + + ++ + ++ C+ + YN + I G
Sbjct: 118 ETAERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGM-IKSGCK-PNTHVYNAL-INGL 174
Query: 140 M-AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
+ A + AI +M +C P++ T+N+++N L ++ +GE + + G+
Sbjct: 175 IGASKSEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSV 234
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
++L+KGLC +E A + ++ K +P+V+ ++TL+HGLC G + A L
Sbjct: 235 ITYSLLMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLD 294
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M + VT N L+ G K G + + + R+ P+ SY L GL R
Sbjct: 295 MNYWNCAPNLVTQNTLMEGFYKDGDMRNALVIWARILKNELQPDIISYNITLKGLCSCNR 354
Query: 319 FPEA 322
+A
Sbjct: 355 ISDA 358
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 112/264 (42%), Gaps = 2/264 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
++ N + A + +++ L R D + I + +K K D Y ++ G I
Sbjct: 53 REGNRSVASFNIMMRGLFDNGRVDEVNSIWELMK--KGGYVEDSITYGILVHGFCKNGYI 110
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+K++ L ++ ++N L + + K G + + N L
Sbjct: 111 NKSLRVLETAERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNAL 170
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GL E A V E +C P + TY+ L++GLC+ EA+ L++ M +G+
Sbjct: 171 INGLIGASKSEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGL 230
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+T+++L+ GL K+E ++L ++ G P+ + +++GL + A
Sbjct: 231 TPSVITYSLLMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALS 290
Query: 325 LVGRMICERMSPSFVSYKKLIHGL 348
L M +P+ V+ L+ G
Sbjct: 291 LYLDMNYWNCAPNLVTQNTLMEGF 314
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
CE G+++ A + + + + D V +N +++G + G++++ +L E M G+ +
Sbjct: 1 CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMM-GREGNRSV 59
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
AS+ ++ GL D R E + M ++Y L+HG C + VL+
Sbjct: 60 ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLET 119
Query: 364 MVQQGFV 370
++G V
Sbjct: 120 AERKGGV 126
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 108/235 (45%), Gaps = 6/235 (2%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI++ + + + P V TF ++ L E ++ KLG +
Sbjct: 141 RINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYG 200
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQ------NCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
L+KGLC GN+ A E NC PNV +YS ++ GLC+ GN EEA L
Sbjct: 201 TLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLF 260
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M +G+ + VTF++LI L K+G+V + KLLE M G PN +Y ++ G
Sbjct: 261 NEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLV 320
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
AKEL M + P +SY LI+G C VE+ + +M+ G P
Sbjct: 321 GDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWP 375
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 117/226 (51%), Gaps = 1/226 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A++ +M WP VKT ++L L A + + ++ + D C
Sbjct: 357 KVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICC 416
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I L GLC+NG + A + +E N + ++ T+ L+ GLC+ G +E A+ L E++ E
Sbjct: 417 IFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEE 476
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI D + ++ +I G K+G+V++ L ++M+ GC P+ +Y ++ G + + +
Sbjct: 477 GIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKV 536
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVDWVLKKMVQQ 367
+L+ RMI + + P Y + +C ++K E +D + + VQ+
Sbjct: 537 VQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQK 582
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 6/225 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S+ +FN +L L + Y ++ +Y G+ D LNIL+ LC + +
Sbjct: 90 SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
++ P+V T++TL+ GLC + + EA L RM+ G + VT+ LI GL
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209
Query: 282 GKVEEGMKLLERMKGK------GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
G + +K + M C PN SY ++ GL + EA L M+ + +
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P+ V++ LI LC + V +L+ M+Q G VP + + ++
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLI 314
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 134/296 (45%), Gaps = 18/296 (6%)
Query: 89 PNEALYTLIINKL---AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PN ++++I+ L Q + + ++M +I + + F Y + + G ++
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGI-----VPNLFTYTSLIKGFCLVGDLN 324
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A E MPS P V ++N+++N E ++ +G+ D +LL
Sbjct: 325 SAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLL 384
Query: 206 KGLCENGNLEAA---FYVLDEF--PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
K L G ++ A F V+ + PK C + GLC+ G + EA L +E
Sbjct: 385 KALFLAGKVDDAKELFRVIKPYAMPKDLC-----ICCIFLDGLCKNGYIFEAMKLFNELE 439
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S + D TF LI GL K GK+E +L E++ +G P++ +Y +++G K +
Sbjct: 440 SYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVD 499
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+A L +M SP ++Y L+ G +E V +L +M+++ P G++
Sbjct: 500 KANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIY 555
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 20/254 (7%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-- 141
R+ Y P+ +T +I L R IE ++++KL G NV+ YG +
Sbjct: 154 RRGYIPDVVTFTTLIKGLCVEHRI--IEATKLFMRMQKL-----GCTPNVVT-YGTLIKG 205
Query: 142 ----GRISKAI----ETLFDMPSY--NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
G I+ A+ E L D Y NC P+V +++++++ L + E ++
Sbjct: 206 LCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVD 265
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
GV+ + ++L+ LC+ G + A +L+ + PN+ TY++L+ G C G++
Sbjct: 266 QGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNS 325
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A L M S+G + D +++N+LI+G K KVEE MKL M G +P+ + +L
Sbjct: 326 AKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLK 385
Query: 312 GLLDKKRFPEAKEL 325
L + +AKEL
Sbjct: 386 ALFLAGKVDDAKEL 399
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 28/284 (9%)
Query: 89 PNEALYTLIINKLAQAKRFD----AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-- 142
P+ ++IN L R + A+ IM+R G+ +V+ + G
Sbjct: 124 PDLLTLNILINCLCNVNRINEGLAAMAGIMRR-----------GYIPDVVTFTTLIKGLC 172
Query: 143 ---RISKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYTSAAKL 192
RI +A + M C P+V T+ ++ N+ ++ K + E+ TS
Sbjct: 173 VEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLN-DTSPYVF 231
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
+ +I++ GLC+ GN E A + +E Q +PNV T+S L+ LC++G V +A
Sbjct: 232 NCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKA 291
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LLE M GI + T+ LI G G + +L M KG P+ SY ++ G
Sbjct: 292 KKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLING 351
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+ EA +L M+ M P + L+ L V+D
Sbjct: 352 YCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDD 395
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 112/268 (41%), Gaps = 35/268 (13%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G +AI +M P+V TF++++++L + + + ++G+ +
Sbjct: 250 VGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFT 309
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+KG C G+L +A + P + EP+V +Y+ L++G C+ VEEA L M
Sbjct: 310 YTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEML 369
Query: 261 SEGIDADTVTFNIL-----------------------------------ISGLRKQGKVE 285
G+ D T +L + GL K G +
Sbjct: 370 HVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIF 429
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
E MKL ++ + ++ ++ GL + A EL ++ E + P ++Y +I
Sbjct: 430 EAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMI 489
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
HG C + V+ + + +KM + G P +
Sbjct: 490 HGFCKKGQVDKANILFQKMEENGCSPDL 517
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL-------CRFSDGFFYNVIKIYGNMA 141
P+ +++ L A + D +++ + IK + C F DG N
Sbjct: 375 PDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKN--------- 425
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDA 198
G I +A++ ++ SYN ++TF +++ L A G+++ + KL G++ DA
Sbjct: 426 GYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKA---GKLETAWELFEKLYEEGIQPDA 482
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+ ++ G C+ G ++ A + + + C P++ TYS LM G E +E+ LL R
Sbjct: 483 MAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHR 542
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
M + + D + I+ + K K +E + LL+R
Sbjct: 543 MIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQR 577
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 5/289 (1%)
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKAIETLFD 153
T + +A+R D ++ + VEK D +NVI I+G AGR+ +A E L
Sbjct: 143 TSVARGFCKAQRVDEAYQLLLDM-VEKKSAKPDIVAWNVI-IHGFCKAGRVREAYEMLET 200
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT--SAAKLGVEIDACCLNILLKGLCEN 211
+ S C P+ T+ +++ + E ++ S+ E + N L+ GLC+
Sbjct: 201 LVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKA 260
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
LE AF ++ + ++ + TY+TLM GLC++G E + E M EG + VT+
Sbjct: 261 DRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTY 320
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
L+ K G +++ +++ M KG P+ +Y +L GL + + A E +++
Sbjct: 321 TTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILR 380
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
ER P V Y L+ G C LV++ +M+ + P + +V
Sbjct: 381 ERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLV 429
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 150/330 (45%), Gaps = 44/330 (13%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN ++++I L +A R +A+E Q ++ + D N++ AG++ +A
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRD---INLLLASLCQAGKMDQA 57
Query: 148 IETLFDMPSYNCWPSVKTFNLVLN-----------------------LLVSAKLYGEIQG 184
+ + C PSV T N+++N L+ A Y I
Sbjct: 58 MAIFRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIK 114
Query: 185 IYTSAAKLG-----VEIDACC------LNILLKGLCENGNLEAAF-YVLDEFPKQNCEPN 232
Y +L +E +CC + + +G C+ ++ A+ +LD K++ +P+
Sbjct: 115 CYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ ++ ++HG C+ G V EA+ +LE + S G + VT+ LI G K G + E ++L +
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234
Query: 293 RMKGKGCY--PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+ + + PN ++ ++ GL R A ELV +M + +Y L+ GLC
Sbjct: 235 VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Q +V V ++M+++G P + + +V
Sbjct: 295 QGRTSEVSRVFEEMLREGCNPSVVTYTTLV 324
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 141/301 (46%), Gaps = 6/301 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ T V + F + +L ++K P+ + +II+ +A R ++
Sbjct: 138 DVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEM 197
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS---YNCWPSVKTFNLVL 170
++ + V C + + +I + +G +S+A++ LF + S ++ P+V TFN ++
Sbjct: 198 LETL-VSMGCVPNAVTYTTLIDGFCK-SGNLSEALQ-LFKVLSSRDHHAEPNVVTFNALI 254
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
+ L A + + D L+ GLC+ G V +E ++ C
Sbjct: 255 SGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCN 314
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P+V TY+TL+H C+ G++++A ++ M ++GI D T+ +L+ GL + GKV +
Sbjct: 315 PSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEF 374
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
E++ + C P + Y ++ G EA + M+ R++P + K L+ LC
Sbjct: 375 FEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCK 434
Query: 351 Q 351
+
Sbjct: 435 R 435
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 4/219 (1%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
NL + + + VL+ S+ PN + +I+ L +A R + ++++++K L +
Sbjct: 225 NLSEALQLFKVLS--SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDL--RA 280
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F Y + GR S+ +M C PSV T+ +++ A + Q +
Sbjct: 281 DTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVI 340
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S G+ D +LL+GL ENG + A ++ ++ C P YS L+ G C+
Sbjct: 341 RSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKA 400
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
V+EA M + D T +L+ L K+G+ +
Sbjct: 401 ALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS 156
+I + K D+ + + I K + SD + ++ + +G + A+E
Sbjct: 35 LIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFRLTRE 94
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
+ W T VL + K + + G Y + G NIL+ C+ G +
Sbjct: 95 HKFWVPFDTCRKVLEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRL 154
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A V DE K P+V +++TLM+G G+++E F L M GI D T+++LI+
Sbjct: 155 AQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLIN 214
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
GL K+ K+ + +L + M G G PN ++ ++ G A E M+ + SP
Sbjct: 215 GLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSP 274
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++Y LI+GLC + ++ ++ +M +G P
Sbjct: 275 DLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKP 309
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 121/252 (48%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+F+N++ G + A ++ + PSV +FN ++N + E + ++
Sbjct: 137 YFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSA 196
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G++ D ++L+ GLC+ + A + DE PN T++TL+ G C+ G+
Sbjct: 197 MHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGS 256
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
++ A + M +G D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 257 IDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + A + RMI E + V+Y LI GLC + + +L++M+ G
Sbjct: 317 LIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVG 376
Query: 369 FVPRMGMWREIV 380
P G + I+
Sbjct: 377 LKPDNGTYTMII 388
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 110/211 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L + ++ G+ + L+ G C+ G+++ A
Sbjct: 204 PDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEA 263
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
E +Q P++ TY+TL++GLC++G++++A L++ M +G+ D +T+ LI G K
Sbjct: 264 YKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G +E K +RM + + +Y ++ GL + + A++++ M+ + P +
Sbjct: 324 EGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGT 383
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y +I+ C + V+ +LK+M + G VP
Sbjct: 384 YTMIINEFCKKGDVKMGSKLLKEMQRDGHVP 414
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 2/214 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + + ++ + L +G + + G I A
Sbjct: 203 QPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLV--PNGVTFTTLIDGHCKTGSIDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E +M P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ GLC +G A +L M S G+ D
Sbjct: 321 SCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPD 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
T+ ++I+ K+G V+ G KLL+ M+ G P
Sbjct: 381 NGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVP 414
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 128/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I K +++FD + + P+ +FN ++N + E +
Sbjct: 137 YFFNILMHRFCKEGEI-KLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKN 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + +E PN T++TL+ G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 368 GFVPRMGMWREIV 380
G P +G + I+
Sbjct: 376 GLKPEIGTYTMII 388
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C VL L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VLEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ C+ G ++ A V D K P +++TLM+G G
Sbjct: 126 DSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M++ G+ D T+++LI+GL K+ K++ +L M G PN ++
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + +SP ++Y LI+GLC + ++ ++ +M +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 113/218 (51%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P V T+++++N L ++ G+ + L+ G C+NG
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D VT+
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTT 316
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+G +E + +RM + + +Y ++ GL + R +A++++ M+
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P +Y +I+ C + V ++K+M + G+VP
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVP 414
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
IY + D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSC 322
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
++G++E AF +RM E I D V + LISGL ++G+ + K+L M G P
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+Y ++ K +L+ M + PS V+
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLV--PNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ GLC++G +A +L M S G+ +
Sbjct: 321 SCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
T+ ++I+ K+G V G KL++ M+ G P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPS 415
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 1/231 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G KA + M C + +N +L L E + I+ VE DA
Sbjct: 230 GDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTY 289
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+I + C+ ++++AF VLD+ + N PNV TY+ ++ LC+ +VEEA+ LL+ M S
Sbjct: 290 SIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMIS 349
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ DT ++N + + +V ++L+ RM+ C P+ +Y VL L+ RF +
Sbjct: 350 RGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDK 409
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQK-LVEDVDWVLKKMVQQGFVP 371
E+ M+ ++ PS +Y +IHG C +K +E+ + M+ +G P
Sbjct: 410 VTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPP 460
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 107/227 (47%), Gaps = 1/227 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GR+ +A DM S P T+++ ++ A + + + +
Sbjct: 264 GGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFT 323
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++K LC+N ++E A+ +LDE + +P+ +Y+ + C+ V A L+ RME
Sbjct: 324 YNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRME 383
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK-RF 319
+ D T+N+++ L + G+ ++ ++ E M K YP+ ++Y +++G KK +
Sbjct: 384 KDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKL 443
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
EA + MI E + P + + L + L ++ ++ + KM Q
Sbjct: 444 EEACKYFEMMIDEGIPPYVTTVEMLRNRLLGLGFIDHIEILAAKMRQ 490
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 44/236 (18%)
Query: 70 DPISVISVLNQYSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF-- 125
D V S K + YN PN Y II +L + + +E+ Q + E + R
Sbjct: 298 DADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEH---VEEAYQLLD-EMISRGVK 353
Query: 126 SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D + YN I+ Y +++A+ +F M C P T+N+VL LL+ + ++ +
Sbjct: 354 PDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEV 413
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ + ++ FY P+V TYS ++HG C+
Sbjct: 414 WENM------------------------VDKKFY-----------PSVSTYSVMIHGFCK 438
Query: 246 K-GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
K G +EEA E M EGI T +L + L G ++ L +M+ Y
Sbjct: 439 KKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNRLLGLGFIDHIEILAAKMRQSTSY 494
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 143/297 (48%), Gaps = 12/297 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV--IKIYGNMAGRISK 146
P+ ++ + +A+ K+F+ + D +++++ +G +N+ + I N R K
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLEL-------NGIAHNIYTLNIMINCFCRCCK 138
Query: 147 ---AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
A L + P TFN ++ L E + + G + D N
Sbjct: 139 TCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS 198
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G+C +G+ A +L + ++N + +V TYST++ LC G ++ A L + ME++G
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 258
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I + VT+N L+ GL K GK +G LL+ M + PN ++ +L + + + EA
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 318
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL MI +SP+ ++Y L+ G C Q + + + +L MV+ P + + ++
Sbjct: 319 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 126/254 (49%)
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
KV KL D +N + + G++S+A+ + M C P V T+N ++N + +
Sbjct: 148 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
+ + V+ D + ++ LC +G ++AA + E + + +V TY+
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
+L+ GLC+ G + LL+ M S I + +TFN+L+ K+GK++E +L + M +
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G PN +Y ++ G + R EA ++ M+ + SP V++ LI G C K V+D
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 358 DWVLKKMVQQGFVP 371
V + + ++G V
Sbjct: 388 MKVFRNISKRGLVA 401
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ II+ L + DA + + ++ + + S YN + AG+ + L D
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGI--KSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S P+V TFN++L++ V E +Y G+ + N L+ G C
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L A +LD + C P++ T+++L+ G C V++ + + G+ A+ VT++I
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ G + GK++ +L + M G P+ +Y +L GL D + +A E+ + +
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
M V Y +I G+C VED W L
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDA-WNL 495
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN + M R+S+A L M C P + TF ++ K + ++ + +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
K G+ +A +IL++G C++G ++ A + E P+V TY L+ GLC+ G +E
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A + E ++ +D V + +I G+ K GKVE+ L + KG PN +Y ++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
GL K EA L+ +M + +P+ +Y LI
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 6/237 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +P+ +T +I KR D + + I L ++ Y+++ +G+
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL--VANAVTYSILVQGFCQSGK 418
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I A E +M S+ P V T+ ++L+ L + I+ K +++
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++G+C+ G +E A+ + P + +PNV TY+ ++ GLC+KG++ EA LL +ME +G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV----LYGLLDK 316
+ T+N LI + G + KL+E MK G +++S + V L G LDK
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDK 595
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 2/266 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y +++ R +++ + V C F ++IK Y M R+
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLD-LMVRNKCSPDIVTFTSLIKGYC-MVKRVDDG 387
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ ++ + T+++++ + + ++ GV D ILL G
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+NG LE A + ++ K + + Y+T++ G+C+ G VE+A+ L + +G+ +
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+ ++ISGL K+G + E LL +M+ G PN +Y ++ L + +L+
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKL 353
M S S K +I L + +L
Sbjct: 568 EMKSCGFSADASSIKMVIDMLLSGEL 593
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 150/353 (42%), Gaps = 16/353 (4%)
Query: 23 STITRKRTFALASPSASHQDSD---HHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLN 79
S I R + F L + + H+ Y LN ++ F SVL
Sbjct: 96 SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI--------MINCFCRCCKTCFAYSVLG 147
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
+ K Y P+ + +I L + ++ R+ VE C+ D YN I
Sbjct: 148 KVMKL-GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM-VENGCQ-PDVVTYNSIVNGIC 204
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+G S A++ L M N V T++ +++ L ++ G++
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L++GLC+ G +L + + PNV T++ L+ ++G ++EA L + M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ GI + +T+N L+ G Q ++ E +L+ M C P+ ++ ++ G KR
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 320 PEAKELVGRMICER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + V R I +R + + V+Y L+ G C ++ + + ++MV G +P
Sbjct: 385 DDGMK-VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N+ T + +++ C A+ +L ++ G + DT TFN LI GL +GKV E + L+
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+RM GC P+ +Y ++ G+ A +L+ +M + +Y +I LC
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETV 399
++ + K+M +G + + +V G GK N + + + V
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 59/135 (43%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A + E + P++ +S + +++E GI + T NI+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I+ + K +L ++ G P++ ++ ++ GL + + EA LV RM+
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 335 SPSFVSYKKLIHGLC 349
P V+Y +++G+C
Sbjct: 190 QPDVVTYNSIVNGIC 204
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 139/301 (46%), Gaps = 16/301 (5%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ +I+ + + KR + + + + + + +C F N++ + G + K
Sbjct: 194 FKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTF--NILINGLCVEGNLKK 251
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-------GVEIDAC 199
A L M P++ T+N +LN +G Y +A +L G+E D C
Sbjct: 252 AGNLLKQMEENGFVPTIVTYNTLLNWYCK-------KGRYKAAIELIDYMICKGIEADVC 304
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N+ + LC N A+ +L + K+ PN TY+TL++G ++G + A + M
Sbjct: 305 TYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEM 364
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ + VT+N LI G G EE ++LL+ M+ G N +Y +L GL ++F
Sbjct: 365 SKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKF 424
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
AK L+ RM M ++Y LI GLC ++++ ++ M + G P + + +
Sbjct: 425 ELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSL 484
Query: 380 V 380
+
Sbjct: 485 I 485
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 12/287 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-----YNVIKIYGNMAGR 143
PN + ++IN L +++++++ +GF YN + + GR
Sbjct: 231 PNVGTFNILINGLCVEGNLKKAGNLLKQME-------ENGFVPTIVTYNTLLNWYCKKGR 283
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
AIE + M V T+N+ ++ L + + + K + + N
Sbjct: 284 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 343
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G + G + A V +E K + PN TY+ L+ G C G+ EEA LL+ ME+ G
Sbjct: 344 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 403
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + VT+ L++GL K K E +LLERM+ +Y ++ GL EA
Sbjct: 404 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAV 463
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+LVG M + ++P ++Y LI+G C ++ ++ +M + G V
Sbjct: 464 QLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 510
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 6/267 (2%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF--SDGFFYNVIKIYGNMAGRI 144
+ P Y ++N + R+ A +++ + +C+ +D YNV R
Sbjct: 264 FVPTIVTYNTLLNWYCKKGRYKAAIELIDYM----ICKGIEADVCTYNVFIDNLCTNHRS 319
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+KA L M P+ T+N ++N V G ++ +K + + N L
Sbjct: 320 AKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNAL 379
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C G+ E A +LD N TY TL++GLC+ E A LLERM +
Sbjct: 380 IGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDM 439
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ + +LI GL K G ++E ++L+ M G P+ +Y ++ G AKE
Sbjct: 440 VVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKE 499
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQ 351
++ RM + + + Y LI+ C
Sbjct: 500 IICRMYRSGLVLNKIIYSTLIYNFCQH 526
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 135/291 (46%), Gaps = 25/291 (8%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI-ETL 151
+Y L + L +A+ +D+ + I++ LC+ G SK+I L
Sbjct: 114 MYCLTAHILVKARMYDSAKSILRH-----LCQMGIG----------------SKSIFGAL 152
Query: 152 FDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
D P N PSV F+L++ + + + + +G + N++L + +
Sbjct: 153 MDTYPLCNSIPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVK 210
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
+ E + + E + PNV T++ L++GLC +GN+++A LL++ME G VT
Sbjct: 211 DKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 270
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+N L++ K+G+ + ++L++ M KG + +Y + L R +A L+ +M
Sbjct: 271 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 330
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
E +SP+ V+Y LI+G + + V +M + P + ++G
Sbjct: 331 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIG 381
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 37/260 (14%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
NE Y ++N L + ++F+ + +++R++V + + G++A
Sbjct: 407 NEVTYGTLLNGLCKHEKFELAKRLLERMRVNDM-------------VVGHIA-------- 445
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+ ++++ L + E + + K GV D + L+ G C
Sbjct: 446 ----------------YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 489
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
GN+++A ++ + N YSTL++ C+ GNV EA + M G AD
Sbjct: 490 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF 549
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T N+L+S L + GK+ E K L M G PNS +Y ++ G A M
Sbjct: 550 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM 609
Query: 330 ICERMSPSFVSYKKLIHGLC 349
I PSF +Y L+ GLC
Sbjct: 610 IKCGQHPSFFTYGSLLKGLC 629
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 132/300 (44%), Gaps = 15/300 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------ 141
NP+ Y+ +IN + + ++I+ R+ + G N I IY +
Sbjct: 475 NPDVITYSSLINGFCRVGNIKSAKEIICRM-------YRSGLVLNKI-IYSTLIYNFCQH 526
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +++A++ M T N++++ L GE + +++G+ ++
Sbjct: 527 GNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITY 586
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ G G+ AF D+ K P+ TY +L+ GLC+ GN+ EA L R+
Sbjct: 587 DCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHY 646
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
D+V +N L++ K G + E + L ++M P+S +Y +L GL K +
Sbjct: 647 IPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVT 706
Query: 322 AKELVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A L G + + P+ V Y L+ GL + + ++M+++G P + I+
Sbjct: 707 AVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAII 766
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 100/230 (43%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+I A + +M ++ P+ T+N ++ + E + G+ ++
Sbjct: 352 GKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTY 411
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
LL GLC++ E A +L+ + Y+ L+ GLC+ G ++EA L+ M
Sbjct: 412 GTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYK 471
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G++ D +T++ LI+G + G ++ +++ RM G N Y ++Y E
Sbjct: 472 DGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTE 531
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A ++ M C + L+ LC + + + L M + G VP
Sbjct: 532 AMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVP 581
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 136/342 (39%), Gaps = 48/342 (14%)
Query: 66 SNLRDPISVISVLNQYSKRKDYNPNEALYTLII--NKLAQAKRFDAIEDIMQRIKVEKLC 123
N+ + + V +V+N D+ L + + KL +A++F M RI +
Sbjct: 527 GNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH---MSRIGL---- 579
Query: 124 RFSDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
+ Y+ +I YG++ ++ A DM PS T+ +L L E
Sbjct: 580 -VPNSITYDCIINGYGSIGDPLN-AFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEA 637
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ + +D+ N LL C++GNL A + D+ + N P+ TYS+L+ G
Sbjct: 638 KKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTG 697
Query: 243 LCEKGNV------------------------------------EEAFGLLERMESEGIDA 266
LC KG + AF E M +G
Sbjct: 698 LCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCP 757
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
DTV FN +I ++G++ + M+ G PN A+Y +L+G K+ L
Sbjct: 758 DTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLY 817
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
M+ E + P +++ LI GL + + +L KM+ +G
Sbjct: 818 STMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEG 859
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 132/309 (42%), Gaps = 2/309 (0%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
++ + + R PN +YT +++ L++A A + + + C D +
Sbjct: 705 VTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC--PDTVAF 762
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N I + G++ KA + M + P++ T+N++L+ + +Y++ +
Sbjct: 763 NAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMR 822
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
G+ D + L+ GL ++G + +L + + + T++ L++ E G + +
Sbjct: 823 EGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRK 882
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
AF L+ M + G+ D T+N + +GL K+ E +L M G P A Y ++
Sbjct: 883 AFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLIN 942
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G+ A +L M V+ ++ GL + ED VL M++ +P
Sbjct: 943 GMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLP 1002
Query: 372 RMGMWREIV 380
+ + ++
Sbjct: 1003 TIATFTTLM 1011
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 8/264 (3%)
Query: 89 PNEALYTLIINKLAQAK---RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PN A Y ++++ ++ + R+ ++ M R + F D ++ + + + +G
Sbjct: 792 PNLATYNILLHGFSKKQALLRYLSLYSTMMREGI-----FPDKLTFHSLILGLSKSGIPD 846
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
++ L M TFN+++N + + + LGV D N +
Sbjct: 847 LGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIF 906
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GL + + VL E + P Y TL++G+C G+++ AF L + ME+ G
Sbjct: 907 NGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 966
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ V + ++ GL GK E+ M +L+ M P A++ +++ + EA +L
Sbjct: 967 SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1026
Query: 326 VGRMICERMSPSFVSYKKLIHGLC 349
G M + V+Y LI G+C
Sbjct: 1027 KGVMELCGLKLDVVAYNVLIMGMC 1050
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 39/271 (14%)
Query: 73 SVISVLNQYSK--RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
+++ L+ YS R+ P++ + +I L+++ D ++ ++ +E +D F
Sbjct: 809 ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEG--TLADQFT 866
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY----------- 179
+N++ + +G++ KA + + M + +P T+N + N L +
Sbjct: 867 FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 926
Query: 180 ---------------------GEIQGIYT---SAAKLGVEIDACCLNILLKGLCENGNLE 215
G+IQG + LG + +++GL G E
Sbjct: 927 ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 986
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A VLD + P + T++TLMH C + EA L ME G+ D V +N+LI
Sbjct: 987 DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 1046
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G+ G +L E M+ + PN +Y
Sbjct: 1047 MGMCANGDSAAAFELYEEMRHRDLCPNITTY 1077
>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 683
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 5/209 (2%)
Query: 126 SDGFF-----YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
SDG YN++ AG + +A+ET+ M P++ TFN ++N +
Sbjct: 418 SDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVH 477
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ + + G+ D L+ GLC L+ AF E + PNV+TY+ L+
Sbjct: 478 DAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLI 537
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
HGLC G+V +A LL +M+ +GI D +FN I + K+E+ KL M G
Sbjct: 538 HGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVS 597
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRM 329
P+S +Y ++ L D++R EAKE++ M
Sbjct: 598 PDSYTYNALIKALCDERRVDEAKEIILAM 626
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 107/202 (52%), Gaps = 8/202 (3%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
++ +LG+ N ++ G ++AA+ + P C P+ TY+TL+HG+C
Sbjct: 167 VFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVC 226
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+G V+EA L+++ME GI + VT+ +L+ G +VEE + +LERMK KG A
Sbjct: 227 RRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEA 286
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERM--SPSF--VSYKKLIHGLCNQKLVEDVDWV 360
+Y+ +++G R E KE RM+ E + P+ ++Y L++ L + ++ +
Sbjct: 287 TYRSLVHGAF---RCLE-KERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVEL 342
Query: 361 LKKMVQQGFVPRMGMWREIVGC 382
KKM ++G++ + ++ C
Sbjct: 343 AKKMSKRGYLLGSTTFSIVIPC 364
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 6/224 (2%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACC 200
ISKA + M S SV+++N+V++ A GE++ + + G +
Sbjct: 406 ISKANKYFSQMVSDGLLSSVESYNIVIDCFAKA---GEVERALETIKVMQESGFSPNLVT 462
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G + GN+ A L + P+V T+++L+ GLC +++AF M
Sbjct: 463 FNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMS 522
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ + T+N+LI GL G V + ++LL +MK G P++ S+ + ++
Sbjct: 523 EWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIE 582
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+A++L M +SP +Y LI LC+++ V++ ++ M
Sbjct: 583 KAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAM 626
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NI++ + G +E A + + PN+ T++TL++G + GNV +A L+ +
Sbjct: 429 NIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVME 488
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D +TF LI GL ++++ M G PN +Y +++GL +
Sbjct: 489 HGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSK 548
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A EL+ +M + ++P S+ I C + +E + M + G P
Sbjct: 549 AIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSP 598
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 89/172 (51%), Gaps = 7/172 (4%)
Query: 183 QGIYTSAAKLGVEIDACCLNI---LLKGLCEN-GNLEAAFYVLDEF---PKQNCEPNVRT 235
+G +A L ++ +C + LL L E+ G L A Y + F P+ P+
Sbjct: 123 RGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAI 182
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y+ ++ G V+ A+ ++M ++G D T+N L+ G+ ++G V+E ++L+++M+
Sbjct: 183 YNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQME 242
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
G PN +Y ++ G + R EA ++ RM + +S + +Y+ L+HG
Sbjct: 243 RAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHG 294
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+V +Y+ ++ + G VE A ++ M+ G + VTFN LI+G K G V + L
Sbjct: 424 SVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFL 483
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ + G P+ ++ ++ GL + +A M + P+ +Y LIHGLC+
Sbjct: 484 KMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSA 543
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
V +L KM G P
Sbjct: 544 GHVSKAIELLNKMKMDGITP 563
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 7/229 (3%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF--FYNVIKIYGNMAGRISKAIETL 151
Y ++I+ A+A +E ++ IKV + FS F +I Y + G + A L
Sbjct: 428 YNIVIDCFAKAGE---VERALETIKVMQESGFSPNLVTFNTLINGYLKL-GNVHDAKAFL 483
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+ + P V TF +++ L + ++ ++ GV + N+L+ GLC
Sbjct: 484 KMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSA 543
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G++ A +L++ P+ +++ + C +E+A L M G+ D+ T+
Sbjct: 544 GHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTY 603
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCY-PNSASYQEVLYGLLDKKRF 319
N LI L + +V+E +++ M+ C +Y V+ L RF
Sbjct: 604 NALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRF 652
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%)
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
CE + L+ G A + ++ G+ T +N +I+ + G V+
Sbjct: 140 GCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAA 199
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
++M GC P+ +Y +++G+ + EA LV +M + P+ V+Y L+ G
Sbjct: 200 YLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDG 259
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
CN VE+ VL++M ++G +R +V
Sbjct: 260 FCNASRVEEAVCVLERMKEKGVSATEATYRSLV 292
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 110/270 (40%), Gaps = 8/270 (2%)
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
++V +L YN + AG + A MP+ C P T+N +++ +
Sbjct: 169 VQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRR 228
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ E + + G+ + +L+ G C +E A VL+ ++ TY
Sbjct: 229 GIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATY 288
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDAD----TVTFNILISGLRKQGKVEEGMKLLE 292
+L+HG E A+ RM SE I++D ++ ++ L+ L K +E ++L +
Sbjct: 289 RSLVHGAFRCLEKERAY----RMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAK 344
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+M +G S ++ V+ + + ELV I + + F Y +I K
Sbjct: 345 KMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCK 404
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
+ + +MV G + + + ++ C
Sbjct: 405 DISKANKYFSQMVSDGLLSSVESYNIVIDC 434
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 120/331 (36%), Gaps = 77/331 (23%)
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
C S+ +++ +G + G A E +P PS +N V+ V A G +
Sbjct: 141 CEVSEELLCALVESWGRL-GLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRA---GAV 196
Query: 183 QGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
Y ++ G D N L+ G+C G ++ A ++ + + PNV TY+ L
Sbjct: 197 DAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTML 256
Query: 240 MHGLCEKGNVEEAFGLLERME-------------------------------SEGIDAD- 267
+ G C VEEA +LERM+ SE I++D
Sbjct: 257 VDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDP 316
Query: 268 ---TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS------------------- 305
++ ++ L+ L K +E ++L ++M +G S +
Sbjct: 317 TLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCE 376
Query: 306 ----------------YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
Y ++ L K +A + +M+ + + S SY +I
Sbjct: 377 LVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFA 436
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
VE +K M + GF P + + ++
Sbjct: 437 KAGEVERALETIKVMQESGFSPNLVTFNTLI 467
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 136/306 (44%), Gaps = 18/306 (5%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK-----IY 137
+R PN YT++++ A R + +++R+K EK ++ + +++ +
Sbjct: 242 ERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMK-EKGVSATEATYRSLVHGAFRCLE 300
Query: 138 GNMAGR-ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
A R +S+ IE+ + S ++ +L L + E + +K G +
Sbjct: 301 KERAYRMLSEWIESDPTLHSI-------AYHTLLYCLSKNDMDKEAVELAKKMSKRGYLL 353
Query: 197 DACCLNILLKGLCENGNLEAA--FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ +I++ C LE++ ++D+F K+ Y ++ ++ +A
Sbjct: 354 GSTTFSIVIP--CAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANK 411
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+M S+G+ + ++NI+I K G+VE ++ ++ M+ G PN ++ ++ G L
Sbjct: 412 YFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYL 471
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+AK + ++ + P +++ LI GLC+ ++D +M + G P +
Sbjct: 472 KLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQ 531
Query: 375 MWREIV 380
+ ++
Sbjct: 532 TYNVLI 537
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 139/338 (41%), Gaps = 53/338 (15%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-- 142
+++ P+ YT +I+ L +A F+ D + R++ + NV+ + G
Sbjct: 296 ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMR-------ATSCLPNVVTYSTLLCGCL 348
Query: 143 ---RISKAIETLFDMPSYNCWPSVKTFN-------------------------------L 168
++ + L M C+PS K FN +
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 169 VLNLLVSA----------KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
V N+L+ + L + Y+ GV ++ ++ + LC G E AF
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
V+ E Q P+ TYS +++ LC +E AF L E M+ G+ AD T+ I++
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G +E+ K M+ GC PN +Y +++ L K+ A EL M+ E P+
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
V+Y LI G C VE + ++M VP + M+
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 143/308 (46%), Gaps = 18/308 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + Y+ ++N L A + + + + +K L +D + Y ++ AG I +A
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL--VADVYTYTIMVDSFCKAGLIEQAR 538
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +M C P+V T+ +++ + AK ++ + G + + L+ G
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 209 CENGNLEAAFYV------------LDEFPKQ---NCE-PNVRTYSTLMHGLCEKGNVEEA 252
C+ G +E A + +D + KQ N E PNV TY L+ G C+ VEEA
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LL+ M EG + + + ++ LI GL K GK++E ++ M G +Y ++
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
KR A +++ +M+ +P+ V Y ++I GLC ++ +++ M ++G P
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778
Query: 373 MGMWREIV 380
+ + ++
Sbjct: 779 VVTYTAMI 786
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 140/339 (41%), Gaps = 40/339 (11%)
Query: 53 KDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIED 112
++ LS + V+++ + P +VIS ++ Y +Y +++ + + E+
Sbjct: 127 REKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEE 186
Query: 113 IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
+Q+I+ + F G F NV+ G S A+E L + + PS T+N
Sbjct: 187 FLQQIRDDDKEVF--GEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN----- 239
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
C + LK L++A + E N +
Sbjct: 240 --------------------------CLIQAFLKA----DRLDSASLIHREMSLANLRMD 269
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
T + LC+ G EA L+E +E DTV + LISGL + EE M L
Sbjct: 270 GFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
RM+ C PN +Y +L G L+KK+ K ++ M+ E PS + L+H C
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRN 391
+LKKMV+ G +P ++ ++G + KD+ N
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 425
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 142/314 (45%), Gaps = 28/314 (8%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGNM-AG 142
PN YT +I+ +AK+ ++ + + S+G N++ I G+ AG
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETM-------LSEGCLPNIVTYSALIDGHCKAG 602
Query: 143 RISKAIETLF------DMPSYNCW----------PSVKTFNLVLNLLVSAKLYGEIQGIY 186
++ KA + D+P + + P+V T+ +L+ + E + +
Sbjct: 603 QVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 662
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ + G E + + L+ GLC+ G L+ A V E + + TYS+L+ +
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 722
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+ A +L +M + V + +I GL K GK +E KL++ M+ KGC PN +Y
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 782
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ G + EL+ RM + ++P++V+Y+ LI C ++ +L++M Q
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 367 QGFVPRMGMWREIV 380
+ +R+++
Sbjct: 843 THWPTHTAGYRKVI 856
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 129/281 (45%), Gaps = 7/281 (2%)
Query: 78 LNQYSKRKDYN---PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++ Y K+ D N PN Y +++ ++ R + ++ + +E C + Y+ +
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG-CE-PNQIVYDAL 680
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G++ +A E +M + ++ T++ +++ K + + +
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ ++ GLC+ G + A+ ++ ++ C+PNV TY+ ++ G G +E
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LLERM S+G+ + VT+ +LI K G ++ LLE MK ++A Y++V+ G
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF- 859
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
K F E+ L+ + + +P Y+ LI L + +E
Sbjct: 860 -NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLE 899
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 20/243 (8%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +YT +I+ L + + D +MQ ++ EK C+ + + +I +G M G+I +
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMME-EKGCQPNVVTYTAMIDGFG-MIGKIETCL 799
Query: 149 ETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
E L M S P+ T+ ++++ L V+ L E++ + G
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK----- 854
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME- 260
+++G N + +LDE + + P + Y L+ L + +E A LLE +
Sbjct: 855 --VIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 261 -SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S + + T+N LI L KVE +L M KG P S+ ++ GL +
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970
Query: 320 PEA 322
EA
Sbjct: 971 SEA 973
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 5/289 (1%)
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKAIETLFD 153
T + +A+R D ++ + VEK D +NVI I+G AGR+ +A E L
Sbjct: 143 TSVARGFCKAQRVDEAYQLLLDM-VEKKSAKPDIVAWNVI-IHGFCKAGRVREAYEMLET 200
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT--SAAKLGVEIDACCLNILLKGLCEN 211
+ S C P+ T+ +++ + E ++ S+ E + N L+ GLC+
Sbjct: 201 LVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKA 260
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
LE AF ++ + ++ + TY+TLM GLC++G E + E M EG + VT+
Sbjct: 261 DRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTY 320
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
L+ K G +++ +++ M KG P+ +Y +L GL + + A E +++
Sbjct: 321 TTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILR 380
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
ER P V Y L+ G C LV++ +M+ + P + +V
Sbjct: 381 ERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLV 429
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 149/330 (45%), Gaps = 44/330 (13%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN ++++I L +A R +A+E Q ++ + D N++ AG + +A
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRD---INLLLASLCQAGTMDQA 57
Query: 148 IETLFDMPSYNCWPSVKTFNLVLN-----------------------LLVSAKLYGEIQG 184
+ + C PSV T N+++N L+ A Y I
Sbjct: 58 MAIFRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIK 114
Query: 185 IYTSAAKLG-----VEIDACC------LNILLKGLCENGNLEAAF-YVLDEFPKQNCEPN 232
Y +L +E +CC + + +G C+ ++ A+ +LD K++ +P+
Sbjct: 115 CYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ ++ ++HG C+ G V EA+ +LE + S G + VT+ LI G K G + E ++L +
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234
Query: 293 RMKGKGCY--PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+ + + PN ++ ++ GL R A ELV +M + +Y L+ GLC
Sbjct: 235 VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Q +V V ++M+++G P + + +V
Sbjct: 295 QGRTSEVSRVFEEMLREGCNPSVVTYTTLV 324
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 141/301 (46%), Gaps = 6/301 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ T V + F + +L ++K P+ + +II+ +A R ++
Sbjct: 138 DVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEM 197
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS---YNCWPSVKTFNLVL 170
++ + V C + + +I + +G +S+A++ LF + S ++ P+V TFN ++
Sbjct: 198 LETL-VSMGCVPNAVTYTTLIDGFCK-SGNLSEALQ-LFKVLSSRDHHAEPNVVTFNALI 254
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
+ L A + + D L+ GLC+ G V +E ++ C
Sbjct: 255 SGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCN 314
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P+V TY+TL+H C+ G++++A ++ M ++GI D T+ +L+ GL + GKV +
Sbjct: 315 PSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEF 374
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
E++ + C P + Y ++ G EA + M+ R++P + K L+ LC
Sbjct: 375 FEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCK 434
Query: 351 Q 351
+
Sbjct: 435 R 435
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 4/219 (1%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
NL + + + VL+ S+ PN + +I+ L +A R + ++++++K L +
Sbjct: 225 NLSEALQLFKVLS--SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDL--RA 280
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F Y + GR S+ +M C PSV T+ +++ A + Q +
Sbjct: 281 DTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVI 340
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S G+ D +LL+GL ENG + A ++ ++ C P YS L+ G C+
Sbjct: 341 RSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKA 400
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
V+EA M + D T +L+ L K+G+ +
Sbjct: 401 ALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 6/299 (2%)
Query: 85 KDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMA 141
KD N P++ Y ++ L++ D + ++ + RF D Y+ I
Sbjct: 302 KDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEER---RFRVDKVGYSAIVHSFCRE 358
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ KA E + +M S C P V T+ V+N L + + + + K G + +
Sbjct: 359 GRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSY 418
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
LL GLC+NGN A +++ + PN TYS LMHG +G EA L+ M
Sbjct: 419 TALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIK 478
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G V N+LI L ++ KV+E + +E+ GC N ++ V++G K
Sbjct: 479 KGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEA 538
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A L+ M P V+Y +I L + +E+ + KM++ G++P +R ++
Sbjct: 539 ALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVI 597
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 156/308 (50%), Gaps = 13/308 (4%)
Query: 68 LRDPISVISVLNQYSKRKDYN-PNEALYTLII-NKLAQAKRFDAIEDIMQRIKVEKLCRF 125
LR+ + ++++ + D + N A++ L++ N+L +A RF ++R+++ ++
Sbjct: 185 LRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF------LERMQIVEI--X 236
Query: 126 SDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
+ YN +IK Y ++ R+ A E + +MP C P ++ V+ L K E++
Sbjct: 237 PNVITYNCLIKGYCDLH-RLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRL 295
Query: 185 IYTSAAK-LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ K + D N + L ++G+ + A L E ++ + YS ++H
Sbjct: 296 LMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSF 355
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C +G +++A ++ M S+G D VT+ +I+GL ++ KV++ K+L +M GC PN+
Sbjct: 356 CREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNT 415
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
SY +L GL EA+E++ P+ ++Y L+HG + + ++++
Sbjct: 416 VSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVRE 475
Query: 364 MVQQGFVP 371
M+++GF P
Sbjct: 476 MIKKGFFP 483
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 133/283 (46%), Gaps = 14/283 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG--RISK 146
P+ YT +IN L Q ++ D + +++++ + G N + + G +
Sbjct: 378 PDVVTYTSVINGLCQERKVDQAKKMLRQM-------YKHGCKPNTVSYTALLNGLCKNGN 430
Query: 147 AIET--LFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
++E + +M W P+ T++++++ E + K G +N+
Sbjct: 431 SLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINL 490
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++ LC+ ++ A +++ C NV ++T++HG C+K ++E A LL+ M
Sbjct: 491 LIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSN 550
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D VT+ +I L K+G++EE KL +M G P +Y+ V++ R +
Sbjct: 551 KHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLL 610
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+L+ +M+ + + +Y ++I LC+ +E +L K+++
Sbjct: 611 KLLEKMLSRQECRT--AYNQVIEKLCSFGNLEQAYKLLGKVLR 651
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
+L +L KL + + AK +E ++ G L A L K
Sbjct: 140 MLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAG 199
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
EP++ +T +H L +++A LERM+ I + +T+N LI G ++E+
Sbjct: 200 IEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAX 259
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE-RMSPSFVSYKKLIHG 347
+L+ M KGC P+ SY V+ L +KR E + L+ +M+ + + P V+Y +H
Sbjct: 260 ELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHM 319
Query: 348 L 348
L
Sbjct: 320 L 320
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A VL K+ E + +M G + A L M+ GI+ D N
Sbjct: 151 QGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTA 210
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I L ++++ ++ LERM+ PN +Y ++ G D R +A EL+ M +
Sbjct: 211 IHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGC 270
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
SP +SY ++ LC +K ++++ +++KM++
Sbjct: 271 SPDKISYYTVMGFLCKEKRIKELRLLMEKMLK 302
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 106/261 (40%), Gaps = 17/261 (6%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + P L+I L Q ++ D + M++ ++G NV+ + G
Sbjct: 478 KKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQC-------LNNGCAVNVVNFTTVIHGF 530
Query: 144 ISK-----AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
K A+ L DM N P V T+ +++ L E + ++G
Sbjct: 531 CQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTP 590
Query: 199 CCLNILLKGLCENGNLEAAFYVLDE-FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
++ C G +E +L++ +Q C Y+ ++ LC GN+E+A+ LL
Sbjct: 591 VTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT---AYNQVIEKLCSFGNLEQAYKLLG 647
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
++ D T ++LI +G + RM + P+ ++V L+ +
Sbjct: 648 KVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEG 707
Query: 318 RFPEAKELVGRMICE-RMSPS 337
+ EA +L+ R + R+SP
Sbjct: 708 KSEEADKLILRFVERGRISPQ 728
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
FY D + +P V Y ++ L + + A +L M I+ F ++
Sbjct: 121 FYWADRQWRYRHDPIV--YYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVS 178
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
+ GK+ M+ L M+ G P+ + ++ L+ R +A + RM + P+
Sbjct: 179 YSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPN 238
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++Y LI G C+ +ED ++ +M +G P
Sbjct: 239 VITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSP 272
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 81 SGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 140
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++G++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 141 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 200
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G D T+++LI+GL K+ K++ +L + M KG PN ++ ++ G R
Sbjct: 201 ASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVD 260
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + + P ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 261 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLI 320
Query: 381 -GCVTFG 386
GC G
Sbjct: 321 DGCCKEG 327
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 130/255 (50%), Gaps = 6/255 (2%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N ++N + +L +G
Sbjct: 139 YFFNILMHRFCKDGDIRVA-QSVFDAITKWGLRPSVVSYNTLMNGYI--RLGDLDEGFRL 195
Query: 188 SAAKL--GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+A L G D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+
Sbjct: 196 KSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCK 255
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +
Sbjct: 256 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFT 315
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G + A RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 YTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 375
Query: 366 QQGFVPRMGMWREIV 380
G P G + I+
Sbjct: 376 SVGLXPDAGTYTMII 390
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S+ FN++++ Q ++ + K G+ N L+ G G+L+ F +
Sbjct: 137 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 196
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
P+V TYS L++GLC++ ++ A L + M +G+ + VTF LI G K
Sbjct: 197 SAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKN 256
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G+V+ M++ ++M + P+ +Y ++YGL K +A +L+ M + + P +Y
Sbjct: 257 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTY 316
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQ 367
LI G C + ++ K+M+Q+
Sbjct: 317 TTLIDGCCKEGDLDTAFXHRKRMIQE 342
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 104/204 (50%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+++++N L ++ G+ + L+ G C+NG ++ A +
Sbjct: 206 PDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEI 265
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D T+ LI G K
Sbjct: 266 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCK 325
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G ++ +RM + + +Y ++ GL + R +A++++ M+ + P +
Sbjct: 326 EGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLXPDAGT 385
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKM 364
Y +I+ C + V +LK+M
Sbjct: 386 YTMIINEFCKKGDVWKGSKLLKEM 409
>gi|255548031|ref|XP_002515072.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545552|gb|EEF47056.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 148/325 (45%), Gaps = 9/325 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQY-SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
L+PT + +I N ++P+ + + + K +Y N +Y +I L + R +++++
Sbjct: 9 LTPTHLSQIIRNQKNPLIALRIFKEAKDKYPNYRHNGPVYATMIGILGSSGRITEMKEVL 68
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+++ E C D F N IK Y + G +++AI ++P +NC ++FN +L ++V
Sbjct: 69 DQMR-EDSCECKDSIFANAIKTYARV-GLLNEAISLFKNIPQFNCVNWTESFNTLLQIMV 126
Query: 175 -SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+KL + S+ V+ LN+L+ LC++ + A V E Q C P+
Sbjct: 127 KESKLEAAHRLFLESSYGWEVKSRVRSLNLLMDVLCQHNRSDVALQVFQEMNYQGCYPDR 186
Query: 234 RTYSTLMHGLCEKGNVEEA----FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+Y +M GLC+ G + EA + + R+ +G D V + I + L G VE+ ++
Sbjct: 187 DSYRIVMMGLCKDGRLNEATHLLYSMFWRISQKGSGEDIVIYRIFLDALCDIGMVEQALE 246
Query: 290 LLERMKGKGC-YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+L ++ KG P + L K L+ + PS SY +
Sbjct: 247 VLGKILRKGLKAPKRCHPRLDLSNCNSDGNIETTKHLINEALIRGAIPSLSSYTAMAVDF 306
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRM 373
+ + D VL + +GF P +
Sbjct: 307 YAEGKLSQADKVLDETQDRGFRPSL 331
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 133/304 (43%), Gaps = 23/304 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD NEA + L +++ + ++ RI ++ LC G +++ G + +
Sbjct: 198 KDGRLNEATHLLYSMFWRISQKGSGEDIVIYRIFLDALCDI--GMVEQALEVLGKILRKG 255
Query: 145 SKA---IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
KA D+ + N +++T ++N A + G I + +S + V+ A
Sbjct: 256 LKAPKRCHPRLDLSNCNSDGNIETTKHLIN---EALIRGAIPSL-SSYTAMAVDFYA--- 308
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
G L A VLDE + P++ TY + LC++G V EA +LE
Sbjct: 309 ---------EGKLSQADKVLDETQDRGFRPSLLTYEAKVAALCKEGKVHEAINVLEVEMV 359
Query: 262 EGIDADTV-TFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGLLDKKRF 319
EG V +NIL+ GL +K L+RM K GC N +Y +++GL F
Sbjct: 360 EGNCVPNVRLYNILLKGLCDARNSATAVKYLKRMAKQTGCVANKETYCILVHGLCQDGGF 419
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA ++ M+ + P ++ LI GLC+ + L++M+ P + +W +
Sbjct: 420 IEASRILEEMLIKSYWPPVDTFNMLIRGLCSIGRQYEATMWLEEMISLDEAPELSVWNSL 479
Query: 380 VGCV 383
V C+
Sbjct: 480 VTCL 483
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 205 LKGLCENGNLEAAFYVLD-EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE- 262
+ LC+ G + A VL+ E + NC PNVR Y+ L+ GLC+ N A L+RM +
Sbjct: 338 VAALCKEGKVHEAINVLEVEMVEGNCVPNVRLYNILLKGLCDARNSATAVKYLKRMAKQT 397
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G A+ T+ IL+ GL + G E ++LE M K +P ++ ++ GL R EA
Sbjct: 398 GCVANKETYCILVHGLCQDGGFIEASRILEEMLIKSYWPPVDTFNMLIRGLCSIGRQYEA 457
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
+ MI +P + L+ LC+ D+D
Sbjct: 458 TMWLEEMISLDEAPELSVWNSLVTCLCSN--TADID 491
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 43/321 (13%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+D+ P+ Y +++ L +A F+ DI+ R++ + Y ++ G++
Sbjct: 273 EDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSC--IPNVVTYRILLSGCLRKGQL 330
Query: 145 SKAIETLFDMPSYNCWPSVKTFN-------------------------------LVLNLL 173
+ L M + C+P+ + FN LV N+
Sbjct: 331 GRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIF 390
Query: 174 V----------SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE 223
+ S+ + ++ Y+ LGV ++ ++ + LC G + AF ++ E
Sbjct: 391 IGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICE 450
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283
+ P+ TYS ++ LC+ VE+AF L E M+ GI T+ ILI K G
Sbjct: 451 MMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGL 510
Query: 284 VEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKK 343
+++ K + M KGC PN +Y +++ L K+ P A EL M+ E P+ V+Y
Sbjct: 511 IQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTA 570
Query: 344 LIHGLCNQKLVEDVDWVLKKM 364
LI G C +E + +M
Sbjct: 571 LIDGHCKAGQIEKACQIYARM 591
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 18/266 (6%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG+ +A + + +M P T++ V+ L A + ++ + G+
Sbjct: 438 AGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYT 497
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
IL+ C+ G ++ A DE + C PNV TY+ L+H + + A L E M
Sbjct: 498 YTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMML 557
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG---------------KGCY-PNSA 304
EG + VT+ LI G K G++E+ ++ RM+G C PN
Sbjct: 558 LEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVI 617
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ GL R EA EL+ M+ P+ + Y +I G C ++D V KM
Sbjct: 618 TYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKM 677
Query: 365 VQQGFVPRMGMWREIVGCVTFGKDNR 390
++G+ P + + + C+ KDNR
Sbjct: 678 SERGYSPNLYTYSSFIDCLF--KDNR 701
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 147/307 (47%), Gaps = 18/307 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY---------NVIKIYGN 139
PN YT +I+ +A + + I R++ + D +F NVI YG
Sbjct: 563 PNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVI-TYGA 621
Query: 140 M------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ A R+ +A E L M ++ C P+ ++ V++ + Q ++T ++ G
Sbjct: 622 LVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERG 681
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ + + L ++ L+ VL + + +C PNV Y+ ++ GLC+ G +EA+
Sbjct: 682 YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAY 741
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L+ +ME +G + + VT+ +I G K GK+E+ ++L M KGC PN +Y+ ++
Sbjct: 742 KLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHC 801
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EA +L+ M +S++K+I G +Q+ + + +L ++ + VP
Sbjct: 802 CSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF-SQEFITSIG-LLDELSENESVPVD 859
Query: 374 GMWREIV 380
++R ++
Sbjct: 860 SLYRILI 866
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 2/211 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A+E L + + PS T+N ++ + + A + +D L
Sbjct: 190 GWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTL 249
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ LC+ G AF ++DE ++ P+ Y+ ++ GLCE EEA +L RM S
Sbjct: 250 SCFAYSLCKGGKCREAFDLIDE--AEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRS 307
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ VT+ IL+SG ++G++ ++L M +GCYPN + +++ + +
Sbjct: 308 SSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSY 367
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
A +L +MI P ++ Y I +C+ +
Sbjct: 368 AYKLFKKMIKCGCQPGYLVYNIFIGSVCSNE 398
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 2/182 (1%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L++ L+ A+ V E + T S + LC+ G EAF L++ E+
Sbjct: 215 NALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLID--EA 272
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
E DTV +N ++SGL + EE M +L RM+ C PN +Y+ +L G L K +
Sbjct: 273 EDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGR 332
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
K ++ MI E P+ + LIH C + + KKM++ G P ++ +G
Sbjct: 333 CKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIG 392
Query: 382 CV 383
V
Sbjct: 393 SV 394
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 124/281 (44%), Gaps = 21/281 (7%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
V + S+R Y+PN Y+ I+ L + R D + ++ ++ +E C NV+ I
Sbjct: 673 VFTKMSER-GYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKM-LENSCT------PNVV-I 723
Query: 137 YGNMA------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
Y M G+ +A + + M C P+V T+ +++ + + ++
Sbjct: 724 YTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMC 783
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G + +L+ C NG L+ A+ +LDE + ++ ++ ++ G ++
Sbjct: 784 SKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQE--FI 841
Query: 251 EAFGLLERM-ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP--NSASYQ 307
+ GLL+ + E+E + D++ + ILI K G++E + LLE + + N Y
Sbjct: 842 TSIGLLDELSENESVPVDSL-YRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYA 900
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
++ L + +A EL MI + + P LI GL
Sbjct: 901 SLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGL 941
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 6/240 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN +YT +++ L + + D +M +++ EK C + + +I +G +G+I +
Sbjct: 718 TPNVVIYTEMVDGLCKIGKTDEAYKLMLKME-EKGCNPNVVTYTAMIDGFGK-SGKIEQC 775
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E DM S C P+ T+ +++N S L E + + +++G
Sbjct: 776 LELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEG 835
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA- 266
+ + +LDE + P Y L+ + G +E A LLE + S A
Sbjct: 836 FSQE--FITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAV 893
Query: 267 -DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ + LI L KV++ ++L M K P + ++ GL+ ++ EA +L
Sbjct: 894 SNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQL 953
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 112/208 (53%), Gaps = 9/208 (4%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
NC P V ++ VL+ L A + + ++ + G + N L++ C+ GNLE A
Sbjct: 279 NCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDA 338
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
V D+ ++ PNV TY+ L+ GLC G V A LL+RM+SEG + + T+N+LI
Sbjct: 339 VAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRY 398
Query: 278 LRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS- 335
++G++E+G+ L E M KG+ C PN +Y ++ + +KR E + RM+ E +
Sbjct: 399 SLEEGEIEKGLDLFETMSKGEECLPNQDTYNIIISAMFVRKR-AEDMAVAARMVVEMVDR 457
Query: 336 ---PSFVSYKKLIHGLC---NQKLVEDV 357
P + ++++GL NQ+L ++
Sbjct: 458 GYLPRKFMFNRVLNGLMLTGNQELSREL 485
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 52/297 (17%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A + +A+E F P T+N + + K I + G+
Sbjct: 194 AASLVRALEQRFP-------PDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKAT 246
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPK-----QNCEPNVRTYSTLMHGL------------ 243
NI+LKG +G L+ A+ + + +NC+P+V +Y+T++HGL
Sbjct: 247 YNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKV 306
Query: 244 -----------------------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
C+KGN+E+A + + M +G + VT+ +LI GL
Sbjct: 307 FDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCH 366
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI-CERMSPSFV 339
GKV MKLL+RMK +GC PN +Y ++ L++ + +L M E P+
Sbjct: 367 AGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFETMSKGEECLPNQD 426
Query: 340 SYKKLIHGLCNQKLVEDVDWVLK---KMVQQGFVPRMGMWREIV-GCVTFGKDNRNR 392
+Y +I + +K ED+ + +MV +G++PR M+ ++ G + G +R
Sbjct: 427 TYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRKFMFNRVLNGLMLTGNQELSR 483
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 103/230 (44%), Gaps = 6/230 (2%)
Query: 156 SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLE 215
S+ + FN +L+ LV ++ + + A + DA N L G C +
Sbjct: 168 SHGIAQDLPLFNSLLDALVKSRRASKAASL-VRALEQRFPPDAVTYNTLADGWCRVKDTS 226
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID-----ADTVT 270
A +L + + P TY+ ++ G G ++ A+ +M+ G + D V+
Sbjct: 227 RALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVS 286
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ ++ GL G++++ K+ + M +GC P++A+Y ++ K +A + M+
Sbjct: 287 YTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMV 346
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P+ V+Y LI GLC+ V +L +M +G P + + ++
Sbjct: 347 RKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLI 396
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
NL D ++V + RK Y PN YT++I L A + ++ R+K E C
Sbjct: 334 NLEDAVAVFDDM----VRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEG-CE-P 387
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYN--CWPSVKTFNLVLNLLVSAKLYGEIQG 184
+ YNV+ Y G I K ++ LF+ S C P+ T+N++++ + K ++
Sbjct: 388 NVQTYNVLIRYSLEEGEIEKGLD-LFETMSKGEECLPNQDTYNIIISAMFVRKRAEDM-- 444
Query: 185 IYTSAAKLGVE-IDACCL------NILLKGLCENGNLE 215
AA++ VE +D L N +L GL GN E
Sbjct: 445 --AVAARMVVEMVDRGYLPRKFMFNRVLNGLMLTGNQE 480
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 150/336 (44%), Gaps = 50/336 (14%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN- 132
+++++ Y + P+ L ++ +AQA FD ++ ++ ++ +++ R + F YN
Sbjct: 91 LVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEV-RI-NSFVYNN 148
Query: 133 ----------------VIKIYGNM------------------AGRISKAIETLFDMPSYN 158
+ K Y M G + +A E DM S+
Sbjct: 149 LLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFG 208
Query: 159 CWPSVKTFNLVLNLLVSA-------KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
C P V T+N ++N L A +L+ EIQ ++ D ++ G C++
Sbjct: 209 CLPDVVTYNTLINGLCKANEVQRGCELFKEIQ------SRSDCSPDIVTYTSIISGFCKS 262
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G ++ A + +E + +PNV T++ L+ G + GN+ EA + +M AD VTF
Sbjct: 263 GKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTF 322
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
LI G + G+V G+K MK + P +Y ++ L + R EA++ +G++
Sbjct: 323 TSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKN 382
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ P Y +I G C V++ + +LK+M ++
Sbjct: 383 SSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEK 418
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 115/260 (44%), Gaps = 1/260 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +IN L +A ++ + I+ C + ++I + +G++ +A
Sbjct: 211 PDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCK-SGKMKEAS 269
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M P+V TFN++++ E + +Y A D L+ G
Sbjct: 270 NLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGY 329
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G + + +N P V TY+ L++ LC++ + EA L ++++ I
Sbjct: 330 CRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKP 389
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+N +I G K G V+EG +L+ M+ K C P+ ++ ++ G K R EA + R
Sbjct: 390 FMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNR 449
Query: 329 MICERMSPSFVSYKKLIHGL 348
M+ R +P ++ LI L
Sbjct: 450 MLATRCAPDNITVNSLISCL 469
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 9/227 (3%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+NL++ L + + ++ G D+ L L+ + + + + +L E
Sbjct: 75 TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEV 134
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ N Y+ L+ L ++ V EA L + DT TFNILI GL + G V
Sbjct: 135 QGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGV 194
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA----KELVGRMICERMSPSFVS 340
+ ++ + M+ GC P+ +Y ++ GL KE+ R C SP V+
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDC---SPDIVT 251
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
Y +I G C +++ + ++M++ G P + + ++ FGK
Sbjct: 252 YTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLID--GFGK 296
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 223 EFPKQNCEPN--VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
EF + N N TY+ LM LC+ G+ + + + M S+G D+ L++ + +
Sbjct: 61 EFSRLNLNVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQ 120
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+ KLL ++GK NS Y +L L+ + + EA L + + P +
Sbjct: 121 ASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWT 180
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ LI GLC V+ V K M G +P + + ++
Sbjct: 181 FNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLI 220
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 140/304 (46%), Gaps = 11/304 (3%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
PN Y +I L +A R DA++ D M+ + V+ + Y Y +G
Sbjct: 400 PNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQ-----PTAYTYITFIDYFGKSGETG 454
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KA+ET M + P++ N L L E + ++ + G+ D+ N+++
Sbjct: 455 KAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMM 514
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
K + G ++ A +L E + CEP+V ++L+ L + G V+EA+ + +RM+ +
Sbjct: 515 KCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLS 574
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
VT+N L+SGL K+G+V++ ++L E M K C PN+ S+ +L A ++
Sbjct: 575 PTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKM 634
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV---LKKMVQQGFVPRMGMWREIVGC 382
+M P ++Y +I+GL + V W LKK + V + +V C
Sbjct: 635 FSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKC 694
Query: 383 VTFG 386
G
Sbjct: 695 GQIG 698
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 110/235 (46%)
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KA + DM + C P TFN++L + + E+ +Y + DA NI++
Sbjct: 806 KAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVI 865
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
L ++ NL+ A + + P RTY L+ GL + G +EEA L E M G
Sbjct: 866 SSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK 925
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ FNILI+G K G E +L +RM +G P+ SY ++ L R EA
Sbjct: 926 PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + P F++Y ++I+GL + +E+ + +M +G VP + + ++
Sbjct: 986 FNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 137/304 (45%), Gaps = 2/304 (0%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+ ++++K+ +P A Y +I +L + + D+ + +K + D F +N++
Sbjct: 774 IFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMK--NVGCAPDAFTFNMLLA 831
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+G+I++ E +M S C P T+N+V++ L + + +
Sbjct: 832 VHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRP 891
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
L+ GL + G LE A + +E C+PN ++ L++G + G+ E A L
Sbjct: 892 TPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLF 951
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+RM +EGI D ++ IL+ L G+V+E + +K G P+ +Y ++ GL
Sbjct: 952 KRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKS 1011
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+R EA L M + P +Y L+ L +VE + +++ G P + +
Sbjct: 1012 QRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTY 1071
Query: 377 REIV 380
++
Sbjct: 1072 NALI 1075
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +T+ I L +A + D +I +R+ E C D Y V+ AG++ A
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEG-CG-PDLVTYTVLIDALCNAGQLENAK 317
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M + P + +L+ + ++ G D IL+ L
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVL 377
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ + + AF D KQ PN+ TY+TL+ GL G +E+A LL+ MES G+
Sbjct: 378 CKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTA 437
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+ I K G+ + ++ E+MK KG PN + LY L + R EAK +
Sbjct: 438 YTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNG 497
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ ++P V+Y ++ V++ +L +M++ G P
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 133/329 (40%), Gaps = 37/329 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT++I+ L A + + +++ ++K D Y + N G +
Sbjct: 295 PDLVTYTVLIDALCNAGQLENAKELFVKMKANG--HKPDQVIYITLLDKFNDFGDLDTFK 352
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E M + P V TF +++++L A+ + E + K G+ + N L+ GL
Sbjct: 353 EFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGL 412
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTL----------------------------- 239
G +E A +LD +P TY T
Sbjct: 413 LRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNI 472
Query: 240 ------MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
++ L E G + EA + + G+ D+VT+N+++ K G+V+E + LL
Sbjct: 473 VACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSE 532
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M GC P+ ++ L R EA ++ RM ++SP+ V+Y L+ GL +
Sbjct: 533 MIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGR 592
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
V+ + + M+ + P + ++ C
Sbjct: 593 VQKAIELFESMIXKKCSPNTISFNTLLDC 621
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 139/328 (42%), Gaps = 8/328 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIEDIM 114
+S EVL + ++ DPI +S S+ P T N + + R D +ED+
Sbjct: 87 VSEDEVLGVLKSMTDPIRALSYFYSISEF----PTVLHTTETCNFMLEFLRVHDKVEDMA 142
Query: 115 QRIKV--EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
+ +K+ R + + K ++ G + + L M + ++N +++L
Sbjct: 143 AVFEFMQKKIIRRDLDTYLTIFKAL-SIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHL 201
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
L+ + GE +Y G++ + L+ L + + E +L E PN
Sbjct: 202 LIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPN 261
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
V T++ + L G ++EA+ + RM+ EG D VT+ +LI L G++E +L
Sbjct: 262 VYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFV 321
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+MK G P+ Y +L D KE +M + P V++ L+ LC +
Sbjct: 322 KMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKAR 381
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ M +QG +P + + ++
Sbjct: 382 DFDEAFATFDVMRKQGILPNLHTYNTLI 409
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 139/358 (38%), Gaps = 47/358 (13%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E L++ + D +V + + R+D + Y I L+ + ++ +++
Sbjct: 130 EFLRVHDKVEDMAAVFEFMQKKIIRRDLDT----YLTIFKALSIRGGLRQMTTVLNKMR- 184
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
K + + YN + +G +A+E M S PS+KT++ ++ L +
Sbjct: 185 -KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ + LG+ + I ++ L G ++ A+ + + C P++ TY+ L
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303
Query: 240 MHGLCEKGNVEEA----------------------------FGLLE-------RMESEGI 264
+ LC G +E A FG L+ +ME++G
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VTF IL+ L K +E + M+ +G PN +Y ++ GLL R +A +
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ M + P+ +Y I +KM +G VP IV C
Sbjct: 424 LLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVP------NIVAC 475
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 91/235 (38%), Gaps = 37/235 (15%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
KLG+ N L+ L E E A+ + + C P+ T++ L+ + G +
Sbjct: 781 KLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKIT 840
Query: 251 EAFGLLERMESEGIDADTVTFNILIS---------------------------------- 276
E F L + M S D +T+NI+IS
Sbjct: 841 ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI 900
Query: 277 -GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
GL K G++EE M+L E M GC PN A + ++ G A +L RM+ E +
Sbjct: 901 DGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
P SY L+ LC V++ + ++ G P + I+ GK R
Sbjct: 961 PDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIIN--GLGKSQR 1013
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 114/241 (47%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ A+ DM +PS+ F+ +L+ + + + + LG+ + +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C L A VL + K EP++ T ++L++G C + +A L+ +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D+ TFN LI GL + + E + L++RM KGC P+ +Y V+ GL + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ P V Y +I LCN K V D + +M +G P + + ++ C
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 383 V 383
+
Sbjct: 301 L 301
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ + +I+ L + R ++ R+ V K C+ D Y ++ G I
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV-KGCQ-PDLVTYGIVVNGLCKRGDIDL 239
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ L M P V +N +++ L + K + ++T G+ + N L++
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC G A +L + ++ PNV T+S L+ ++G + EA L + M ID
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T++ LI+G +++E + E M K C+PN +Y ++ G KR E EL
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + + V+Y LIHG + ++ V K+MV G +P
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 141/292 (48%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ ++ +++ +A+ +FD + + +++ + L + + Y+++ ++S A+
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQM--QNLGISHNLYTYSILINCFCRRSQLSLAL 136
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M P + T N +LN + + ++G + D+ N L+ GL
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ A ++D + C+P++ TY +++GLC++G+++ A LL++ME I+
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +N +I L V + + L M KG PN +Y ++ L + R+ +A L+
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI +++P+ V++ LI + + + + + +M+++ P + + ++
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
RIS A+ + M P TFN +++ L E + G + D
Sbjct: 164 GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT 223
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
I++ GLC+ G+++ A +L + + EP V Y+T++ LC NV +A L M+
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD 283
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++GI + VT+N LI L G+ + +LL M + PN ++ ++ + + +
Sbjct: 284 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA++L MI + P +Y LI+G C +++ + + M+ + P + + ++
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 136/288 (47%), Gaps = 4/288 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-FYNVIKIYGNMAGR 143
K P+ Y +++N L + D ++++++ K+ G YN I
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI---EPGVVIYNTIIDALCNYKN 271
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
++ A+ +M + P+V T+N ++ L + + + + + + + + +
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ + G L A + DE K++ +P++ TYS+L++G C ++EA + E M S+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+N LI G K +V+EGM+L M +G N+ +Y +++G + A+
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +M+ + + P ++Y L+ GLCN VE V + + + P
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 143/327 (43%), Gaps = 37/327 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P +Y II+ L K + ++ + K R + + ++I+ N GR S A
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMD-NKGIRPNVVTYNSLIRCLCNY-GRWSDAS 311
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L DM P+V TF+ +++ V E + +Y K ++ D + L+ G
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-------- 260
C + L+ A ++ + ++C PNV TY+TL+ G C+ V+E L M
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 261 ---------------------------SEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
S+G+ D +T++IL+ GL GKVE + + E
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
++ P+ +Y ++ G+ + + +L + + + P+ V+Y ++ G C + L
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
E+ D + ++M ++G +P G + ++
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 115/246 (46%), Gaps = 2/246 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ +P+ Y+ +IN R D + + + + + K C F + YN + A R
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE-LMISKDC-FPNVVTYNTLIKGFCKAKR 411
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ + +E +M + T+ +++ A+ Q ++ GV D +I
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC NG +E A V + + EP++ TY+ ++ G+C+ G VE+ + L + +G
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + VT+ ++SG ++G EE L MK +G P+S +Y ++ L +
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Query: 324 ELVGRM 329
EL+ M
Sbjct: 592 ELIREM 597
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 2/260 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NPN ++ +I+ + + E + + + D F Y+ + M R+ +A
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI--DPDIFTYSSLINGFCMHDRLDEA 380
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
M S +C+P+V T+N ++ AK E ++ ++ G+ + L+ G
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ + A V + P++ TYS L+ GLC G VE A + E ++ ++ D
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+NI+I G+ K GKVE+G L + KG PN +Y ++ G K EA L
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Query: 328 RMICERMSPSFVSYKKLIHG 347
M E P +Y LI
Sbjct: 561 EMKEEGPLPDSGTYNTLIRA 580
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 4/212 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD PN Y +I +AKR D ++ + + L + Y + I+G R
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL--VGNTVTYTTL-IHGFFQARE 446
Query: 145 SKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +F M S P + T++++L+ L + ++ + +E D NI
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++G+C+ G +E + + + +PNV TY+T+M G C KG EEA L M+ EG
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
D+ T+N LI + G +L+ M+
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 135/315 (42%), Gaps = 39/315 (12%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS 156
+I L R D D++ R ++ +L D F YN + + + +A+E L M +
Sbjct: 132 LIKGLCDGNRTDDAMDMVFR-RMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTA 190
Query: 157 ---YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
YNC P+V ++N V++ + ++ G+ D N L+ GLC+
Sbjct: 191 DGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQA 250
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A +L + P+ RTY+ ++ G C G +EEA LL++M G+ D VT+++
Sbjct: 251 MDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSL 310
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE- 332
LI K G+ E + + M KG PNS Y +L+G K + ++L+ MI +
Sbjct: 311 LIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 370
Query: 333 ----------------------------------RMSPSFVSYKKLIHGLCNQKLVEDVD 358
+ P VSY +IH LC VED
Sbjct: 371 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAV 430
Query: 359 WVLKKMVQQGFVPRM 373
+ +MV +G P +
Sbjct: 431 YHFNQMVSEGLSPNI 445
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A + KA+ L M P +T+N+++ S E + + G++ D
Sbjct: 248 AQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVT 307
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
++L++ C+ G A V D ++ +PN Y L+HG KG + + LL+ M
Sbjct: 308 YSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMI 367
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+GI + FNILI K G V++ M M+ G P+ SY V++ L R
Sbjct: 368 RDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVE 427
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A +M+ E +SP+ +S+ LIHGLC+ + V+ + +M+ +G P
Sbjct: 428 DAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHP 478
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GR+ A+ M S P++ +F +++ L S + +++ + G+ DA
Sbjct: 423 TGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIF 482
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+N ++ LC+ G + A D +P+V +Y+TL+ G C G ++E+ L+RM
Sbjct: 483 MNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMV 542
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S G+ D+ T+N L++G K G+VE+ + L M K + + +L+GL R
Sbjct: 543 SIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIV 602
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
A+EL +M+ +Y ++ GLC V++
Sbjct: 603 AARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDE 638
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 141/319 (44%), Gaps = 39/319 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRISKA 147
P+ Y +I+ L +A+ D I+Q + + + D YN+ I+ Y ++ G++ +A
Sbjct: 233 PDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGV--MPDTRTYNIMIRGYCSL-GQLEEA 289
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M P V T++L++ E + ++ S + G + ++ +ILL G
Sbjct: 290 VRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHG 349
Query: 208 --------------------------------LC---ENGNLEAAFYVLDEFPKQNCEPN 232
+C ++G ++ A E + P+
Sbjct: 350 YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 409
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
V +YST++H LC+ G VE+A +M SEG+ + ++F LI GL G+ ++ +L
Sbjct: 410 VVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAF 469
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M +G +P++ ++ L + R EA++ +I + P VSY LI G C
Sbjct: 470 EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVG 529
Query: 353 LVEDVDWVLKKMVQQGFVP 371
+++ L +MV G P
Sbjct: 530 KMDESIKQLDRMVSIGLRP 548
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 4/185 (2%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAF-YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
K G + LN L+KGLC+ + A V P+ P+V +Y+ L+ GLC +
Sbjct: 119 KTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKS 178
Query: 250 EEAFGLLERMESEG---IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+EA LL M ++G + V++N +I G K+G+V++ L M G+G P+ +Y
Sbjct: 179 QEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTY 238
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL + +A ++ M + + P +Y +I G C+ +E+ +LKKM
Sbjct: 239 NSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSG 298
Query: 367 QGFVP 371
G P
Sbjct: 299 SGLQP 303
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 127/298 (42%), Gaps = 2/298 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK PN +Y ++++ A + D++ + + F F +I Y G
Sbjct: 333 RKGQKPNSTIYHILLHGYATKGALIDVRDLLD-LMIRDGIPFEHRAFNILICAYAK-HGA 390
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA+ +M P V +++ V+++L + + G+ +
Sbjct: 391 VDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTS 450
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC G + + E + P+ +T+M LC++G V EA + + G
Sbjct: 451 LIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIG 510
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D V++N LI G GK++E +K L+RM G P+S +Y +L G R +A
Sbjct: 511 VKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDAL 570
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
L M + + ++ ++HGL + + KMV +G R+ + ++G
Sbjct: 571 ALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLG 628
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 123/289 (42%), Gaps = 14/289 (4%)
Query: 89 PNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS-- 145
P+ Y+ +I+ L + R DA+ Q + S+G N+I + G S
Sbjct: 408 PDVVSYSTVIHILCKTGRVEDAVYHFNQMV--------SEGLSPNIISFTSLIHGLCSIG 459
Query: 146 --KAIETL-FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
K +E L F+M + P N +++ L E Q + +GV+ D N
Sbjct: 460 EWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYN 519
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C G ++ + LD P+ TY++L++G + G VE+A L M +
Sbjct: 520 TLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRK 579
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ +T NI++ GL + G++ +L +M +G +Y VL GL + EA
Sbjct: 580 DVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEA 639
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + + ++ +I+ L +++ + MV +G VP
Sbjct: 640 LRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVP 688
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 8/296 (2%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR--FSDGFFYNVIKIYGNMAGRIS 145
+PN +T +I+ L + +E++ E + R D F N I GR+
Sbjct: 442 SPNIISFTSLIHGLCSIGEWKKVEEL----AFEMINRGIHPDAIFMNTIMDNLCKEGRVV 497
Query: 146 KAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A + FDM + P V ++N +++ E +G+ D+ N L
Sbjct: 498 EA-QDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSL 556
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L G +NG +E A + E +++ + T + ++HGL + G + A L +M G
Sbjct: 557 LNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGT 616
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
T+N ++ GL + V+E +++ E ++ K + ++ V+ LL R EAK
Sbjct: 617 QLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKS 676
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L M+ P ++Y +I + L+E+ D + M + G M IV
Sbjct: 677 LFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIV 732
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 2/228 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +I+ + D E I Q ++ + D + YN + GR+ A+
Sbjct: 513 PDVVSYNTLIDGYCFVGKMD--ESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDAL 570
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M + T N++L+ L A + +Y G ++ N +L GL
Sbjct: 571 ALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGL 630
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
CEN ++ A + ++ + E +VRT+S +++ L + G ++EA L M G D
Sbjct: 631 CENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDV 690
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+T++++I ++G +EE L M+ GC +S ++ LL+K
Sbjct: 691 ITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEK 738
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGRI A E M ++T+N VL L E ++ E+D
Sbjct: 598 AGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRT 657
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+I++ L + G ++ A + + P+V TYS ++ E+G +EE+ L ME
Sbjct: 658 FSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSME 717
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G AD+ NI++ L ++G V L ++ K + AS +L ++ +K++
Sbjct: 718 KNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKN-FSLEASTAALLIPIVSEKKY 775
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 1/207 (0%)
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
+P+ +N +++ L A + E + Y + NI++ G C+ N+E A
Sbjct: 7 FPNAILYNNLISCLCKAGMLAEAES-YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALA 65
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
L E + P YS+++ C+ GNV +A + M ++G + D V FN+L+SGL
Sbjct: 66 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 125
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
+ K+ E +L M +GC P+ +Y ++ GL K+ EA L+ RM E +SP+FV
Sbjct: 126 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 185
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+Y LI LC ++ V +KM +
Sbjct: 186 TYTTLIDHLCKFTRLQQAYEVFEKMAE 212
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 142/285 (49%), Gaps = 5/285 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +II+ +A+ + ++ ++E+L Y+ I G +SKA+
Sbjct: 42 PNVVSYNIIIDGYCKARNIEKALAFLR--EMEELGHPPTPHAYSSIVQSFCKTGNVSKAM 99
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +MP+ C P + FN++L+ L A+ E + ++ S G + D N ++ GL
Sbjct: 100 DVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGL 159
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ L+ A ++L+ +++ P TY+TL+ LC+ +++A+ + E+M
Sbjct: 160 CKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTE 219
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL--LDKKRFPEAKELV 326
+++L + L++ GK+ E ++ M K +Y V+ GL +D EA +LV
Sbjct: 220 PAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNV-EAAKLV 278
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ ++++P F +Y LI+GLC + + + ++M +G P
Sbjct: 279 TEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISP 323
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 128 GFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
G F N I +Y N+ AG +++A L MP + C P+V ++N++++ A+ +
Sbjct: 5 GLFPNAI-LYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEK 62
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
+LG + +++ C+ GN+ A V E P + CEP++ ++ L+
Sbjct: 63 ALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLS 122
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GL + EA L M S G D VT+N +I+GL K K++E + LLERMK + P
Sbjct: 123 GLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSP 182
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMI---CERMSPSF-VSYKKL 344
+Y ++ L R +A E+ +M C P++ V + KL
Sbjct: 183 TFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKL 229
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 139/312 (44%), Gaps = 14/312 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+ Y+++IN L +A+R +++ Q ++ + YN + ++
Sbjct: 284 KKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGIS--PTVVTYNTLLEGLLSTAKL 341
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+E + M P ++NL++ + E ++ K G+ ++ N +
Sbjct: 342 QDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFM 401
Query: 205 LKGLCENGNLEAAFYVL--------DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ G ++ +A+ + D+ P PN+ TY L+ LC+ VEEAF LL
Sbjct: 402 IVGFIKDEAWSSAWMLFKRMQSGKNDKVPA----PNMFTYEILISSLCKTDQVEEAFKLL 457
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M +G + +L+S L + G++++ +L + M C S +L G+L +
Sbjct: 458 SAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRR 517
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
EAK+ + +M + P +Y KL+ GLC Q + +++++V+ G P
Sbjct: 518 GSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGL 577
Query: 377 REIVGCVTFGKD 388
R+++G + D
Sbjct: 578 RQLLGALCAQGD 589
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 151/357 (42%), Gaps = 55/357 (15%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
E Y+++ NKL +A + + + + +C +D + V+ M G +A +
Sbjct: 218 TEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVC-MTDNTYSLVVLGLSKMDGGNVEAAK 276
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+ +M P +++++N L A+ GE + ++ G+ N LL+GL
Sbjct: 277 LVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLL 336
Query: 210 ENGNLEAA----FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
L+ A +++LD Q P+ +Y+ ++ G C G+ EA+ L + M +GI
Sbjct: 337 STAKLQDAMELTYFMLD----QGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIV 392
Query: 266 ADTVTFN---------------------------------------ILISGLRKQGKVEE 286
+T T+N ILIS L K +VEE
Sbjct: 393 LNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEE 452
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL---VGRMICERMSPSFVSYKK 343
KLL M+ KG P+ ++ +L L R +A EL + R+ C+++ S
Sbjct: 453 AFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG---SSNI 509
Query: 344 LIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE-IVGCVTFGKDNRNRVYVTETV 399
L+ G+ + V++ LK+M G VP + + +VG GK ++ R V E V
Sbjct: 510 LLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELV 566
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 135/309 (43%), Gaps = 13/309 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+ + ++++ L +A++ ++ + + + C+ D YN + ++
Sbjct: 108 KGCEPDIVNFNVLLSGLWRARKIHEARELFRSMN-SRGCK-PDVVTYNTMIAGLCKWKKL 165
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC---CL 201
+A+ L M + P+ T+ +++ L + +Q Y K+ AC
Sbjct: 166 DEAVFLLERMKQEDVSPTFVTYTTLIDHLCK---FTRLQQAYEVFEKMAEGPCACTEPAY 222
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC--EKGNVEEAFGLLERM 259
++L L G L A V + ++N TYS ++ GL + GNVE A L+ M
Sbjct: 223 SVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAA-KLVTEM 281
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ I D ++ILI+GL K + E ++ + M+G+G P +Y +L GLL +
Sbjct: 282 MGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKL 341
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+A EL M+ + P SY +I G C + + + M++ G V + W
Sbjct: 342 QDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIV--LNTWTYN 399
Query: 380 VGCVTFGKD 388
V F KD
Sbjct: 400 FMIVGFIKD 408
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P++ T+ ++++ L E + ++ G +LL L G L+ AF +
Sbjct: 432 PNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFEL 491
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
E + NC+ V + + L+ G+ +G+V+EA L++M GI D T++ L+ GL
Sbjct: 492 YKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCW 551
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
QGK ++ KL+E + G P + +++L L + F A E
Sbjct: 552 QGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEF 596
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 14/194 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AG 142
PN Y ++I+ L + D +E+ + + + D F +KI+ + AG
Sbjct: 432 PNMFTYEILISSLCKT---DQVEEAFKLLSAMR-----DKGFVPSLKIWEVLLSRLARAG 483
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A E +M NC V + N++L+ ++ E + G+ D +
Sbjct: 484 RLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYD 543
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC G + A +++E + P + L+ LC +G+ + A+ + S
Sbjct: 544 KLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSV 603
Query: 263 GIDADTVTFNILIS 276
G++ N L++
Sbjct: 604 GVEVTLGMHNTLVT 617
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 9/127 (7%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M G+ + + +N LIS L K G + E L+RM + C PN SY ++ G +
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARN 59
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM----- 373
+A + M P+ +Y ++ C V V +M +G P +
Sbjct: 60 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119
Query: 374 ---GMWR 377
G+WR
Sbjct: 120 LLSGLWR 126
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 131/273 (47%), Gaps = 3/273 (1%)
Query: 111 EDIMQRIKVEKLCRFSD-GFFYNVIKIYGNMAG--RISKAIETLFDMPSYNCWPSVKTFN 167
+++ R+ E R SD G +V M+G ++ KA L +M + P+ TFN
Sbjct: 160 KNLKTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKMYKADAILKEMKADGICPNEVTFN 219
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
++++ + K ++ + GV+ + N L+ GLC NG + A + D+
Sbjct: 220 ILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNS 279
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
EPN+ T++ L++G C+ V++A L E M + I + T+NILI K +E+
Sbjct: 280 CLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDA 339
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
L M GKG YP+ ++Y ++ GL K A+ V M + + ++Y L+
Sbjct: 340 FALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDS 399
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LCN+ ++ +L +M ++G P + ++
Sbjct: 400 LCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMI 432
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 132/305 (43%), Gaps = 25/305 (8%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS 156
+++ LA AK++ I + V+ + F ++ I + G+ S ++ L
Sbjct: 101 MLHSLAYAKKYSKIRSFLDNC-VQNDKNYPVSFIFHAISVSGDSFCANSIIVDILV---- 155
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
W K NL L A + A+ G+++ N L+ GL + +A
Sbjct: 156 ---WADAK--NLKTRLGFEA---------FKRASDYGLKLSVTSCNPLMSGLVKMYKADA 201
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
+L E PN T++ L+ G C NV A + M +G+ + VT+N LI+
Sbjct: 202 ---ILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLIN 258
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
GL GKV E L ++M PN ++ +L G K +A EL M +R++P
Sbjct: 259 GLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITP 318
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR-EIVGCVTFG--KDNRNRV 393
+ +Y LI C + +ED + + M+ +G P + + IVG G + RNRV
Sbjct: 319 NVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRV 378
Query: 394 YVTET 398
+T
Sbjct: 379 SEMDT 383
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+S A++ +M P+V T+N ++N L + E + +E + N
Sbjct: 231 VSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNA 290
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL G C+N ++ A + ++ PKQ PNV TY+ L+ C+ N+E+AF L M +G
Sbjct: 291 LLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG 350
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D T+N LI GL ++G +E + M K + +Y ++ L +K +
Sbjct: 351 VYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTL 410
Query: 324 ELVGRMICERMSPSFVSYKKLIHG 347
L+ M + + PS ++Y +I G
Sbjct: 411 RLLDEMCKKGLKPSQLTYNTMIDG 434
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 95/172 (55%), Gaps = 2/172 (1%)
Query: 142 GRISKAIETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++++A TL D +C P++ T N +LN K+ + ++ K + +
Sbjct: 264 GKVNEAT-TLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTT 322
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C++ N+E AF + + P+V TY+ L+ GLC KG++E A + M+
Sbjct: 323 YNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMD 382
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
++ + AD +T+NIL+ L +G++++ ++LL+ M KG P+ +Y ++ G
Sbjct: 383 TKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDG 434
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 10/239 (4%)
Query: 54 DWLSPTEV-----LKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD 108
D + P EV + F N ++ + V + + R+ PN Y +IN L + +
Sbjct: 209 DGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMN-RQGVKPNVVTYNSLINGLCNNGKVN 267
Query: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF-DMPSYNCWPSVKTFN 167
E R ++ C + +N + + G ++ K LF DMP P+V T+N
Sbjct: 268 --EATTLRDQMVNSCLEPNIITHNAL-LNGFCKNKMVKQAGELFEDMPKQRITPNVTTYN 324
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
++++ + + +Y GV D N L+ GLC G+LE A + E +
Sbjct: 325 ILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTK 384
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+ + ++ TY+ LM LC KG +++ LL+ M +G+ +T+N +I G K+G + +
Sbjct: 385 HLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNLRQ 443
>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 148/362 (40%), Gaps = 67/362 (18%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK---------VEKLCR---------- 124
RK P++ Y I++ L + R D +++ + V LCR
Sbjct: 164 RKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSV 223
Query: 125 FSD----GFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFN-LVLNLL 173
SD G NVI Y + AG + A L M C P+V TF LV L
Sbjct: 224 VSDMVGRGLQPNVIT-YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLF 282
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+++ + ++ G NIL++GLC G+L+ A +L+ + C PNV
Sbjct: 283 DDGRVHDALD-MWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNV 341
Query: 234 RTYSTLMHGLCEKGNV-----------------------------------EEAFGLLER 258
RTYSTL+ G + G++ +A L+++
Sbjct: 342 RTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDK 401
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M E +TVTFN LI L +V + + M+ GC PN +Y E+++GL +
Sbjct: 402 MLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGN 461
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
+A +V M + S V+Y ++ GLC ++ + + KM+ QG P +
Sbjct: 462 CGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSA 521
Query: 379 IV 380
I+
Sbjct: 522 II 523
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 136/303 (44%), Gaps = 16/303 (5%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM---- 140
+ + P+ Y ++I L I+ ++ G F NV + Y +
Sbjct: 300 EGWAPSTVSYNILIRGLCSVGDLKGASSILNSME-------QHGCFPNV-RTYSTLIDGF 351
Query: 141 --AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
AG + AI DM C P+V + ++++ ++ + + + +
Sbjct: 352 SKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNT 411
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N L++ LC+ + A V E + C PN RTY+ L+HGL +GN +A ++
Sbjct: 412 VTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTE 471
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M+S GI+ VT+N ++SGL + E M + +M +G PN+ ++ +++ +
Sbjct: 472 MQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGE 531
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQQGFVPRMGMWR 377
A ++G M + + Y L+ LCNQ KLV+ + ++L KM+ +G P W
Sbjct: 532 VRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLL-KMLYEGIYPNTVTWN 590
Query: 378 EIV 380
+V
Sbjct: 591 VLV 593
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 129/315 (40%), Gaps = 42/315 (13%)
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCW 160
L Q R A ++ + K C D + ++ + + R+ +A E L MP
Sbjct: 146 LCQNNRVGAARKMLDEMA-RKGCPPDDVTYATIVSVLCKL-DRLDEATEVLAAMP----- 198
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P ++N ++ L E+ + + G++ + ++ C+ G L A +
Sbjct: 199 PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI 258
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L C PNV T++ L+ GL + G V +A + M +EG TV++NILI GL
Sbjct: 259 LARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCS 318
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYG---------------------------- 312
G ++ +L M+ GC+PN +Y ++ G
Sbjct: 319 VGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVV 378
Query: 313 -------LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
K F +AK L+ +M+ E P+ V++ LI LC+ + V V +M
Sbjct: 379 YTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMR 438
Query: 366 QQGFVPRMGMWREIV 380
+ G VP + E++
Sbjct: 439 RHGCVPNGRTYNELI 453
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 16/292 (5%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
S+LN + + PN Y+ +I+ ++A I + G NV+
Sbjct: 327 SILNSMEQHGCF-PNVRTYSTLIDGFSKAGDLGGAISIWNDMS-------RSGCKPNVV- 377
Query: 136 IYGNMAGRISKAI-----ETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+Y NM K + ++L D M NC P+ TFN ++ L + G G++
Sbjct: 378 VYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEM 437
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ G + N L+ GL GN A +++ E E ++ TY+T++ GLC+
Sbjct: 438 RRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMS 497
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EA + +M +GI + TF+ +I K+G+V +L M C+ N Y +
Sbjct: 498 REAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTIL 557
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVDWV 360
+ L ++ + +A + +M+ E + P+ V++ L+ G+ N +E D++
Sbjct: 558 MAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFI 609
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P+ R + LC+ V A +L+ M +G D VT+ ++S L K +++E ++
Sbjct: 134 PHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEV 193
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L M P +ASY ++ L + R E +V M+ + P+ ++Y ++ C
Sbjct: 194 LAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCK 248
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ +L +MV G P + + +V
Sbjct: 249 AGELRMACAILARMVITGCTPNVVTFTALV 278
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 116/242 (47%), Gaps = 4/242 (1%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D Y + AGR+ A M K +N+++ K E +
Sbjct: 352 DAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELL 411
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
++G+ D C N LL G C+ G+ A +L + C+P+V T+ TL+HG C+
Sbjct: 412 QEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKV 471
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G ++EA +L M+ GI + V +N LI L K+G V+ ++L + MK K N ++
Sbjct: 472 GKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTF 531
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+L GL DK +A EL+ +M ER P +V+ L+ L ++ + D LK+ +Q
Sbjct: 532 NALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL---PVIGETDR-LKRFMQ 587
Query: 367 QG 368
QG
Sbjct: 588 QG 589
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 140/310 (45%), Gaps = 5/310 (1%)
Query: 75 ISVLNQYSKRK-DYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYN 132
+ VL+ S++ D P+ +++ L ++ R +A+ + QR+ C + YN
Sbjct: 192 LRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCP-PNTVTYN 250
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+ G IS A E + M + ++ T N ++ L A G + +
Sbjct: 251 CLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTV 310
Query: 193 GVEI--DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
E +A + L+ L N+ A + E + P+ Y T++ GL + G +E
Sbjct: 311 WPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLE 370
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A + M+ G DT +NILI+G ++ ++ E +LL+ MK G P+ +Y +L
Sbjct: 371 DACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLL 430
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
G F EL+G+MI + PS +++ L+HG C +++ +L+ M + G
Sbjct: 431 SGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIH 490
Query: 371 PRMGMWREIV 380
P ++ ++
Sbjct: 491 PNNVIYNTLI 500
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+E + S P + +++ L A + + +S + G ++D NI
Sbjct: 334 VGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNI 393
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C L A+ +L E + P+V TY+TL+ G C+ G+ LL +M +G
Sbjct: 394 LIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDG 453
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+TF L+ G K GK++E +++L M G +PN+ Y ++ L + A
Sbjct: 454 CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAI 513
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EL M + + + ++ L+ GL ++ + E ++ +M ++ P
Sbjct: 514 ELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFP 561
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 21/283 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK---IYGNM--AGR 143
PN Y +I+ + +++++++ E G N++ I G + AGR
Sbjct: 244 PNTVTYNCLIDAFCRVGNISMAYELVEKMENE-------GVPQNIVTLNTIVGGLCRAGR 296
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY----GEIQGIYTSAAKLGVEIDAC 199
A+E F WP K + + LV A L+ G ++ G DA
Sbjct: 297 TGAALE--FFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAI 354
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
++ GL + G LE A + + + + + Y+ L+ G C K + EA+ LL+ M
Sbjct: 355 MYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEM 414
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ GI D T+N L+SG K G +LL +M GC P+ ++ +++G +
Sbjct: 415 KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKI 474
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
EA ++ M + P+ V Y LI LC + DVD ++
Sbjct: 475 DEALRILRSMDESGIHPNNVIYNTLIDFLCKRG---DVDLAIE 514
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 96/238 (40%), Gaps = 53/238 (22%)
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN------- 228
A++Y +QG + V D IL+ GLC+ G + A VLD +Q+
Sbjct: 156 ARIYALMQGCAS------VRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDV 209
Query: 229 --------------------------------CEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
C PN TY+ L+ C GN+ A+ L+
Sbjct: 210 VTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELV 269
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK-----GKGCYPNSASYQEVLY 311
E+ME+EG+ + VT N ++ GL + G+ ++ + GKG N+ +Y ++
Sbjct: 270 EKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKG---NAVTYSTLVG 326
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
LL A EL + E SP + Y +I GL +ED + M + GF
Sbjct: 327 ALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGF 384
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 45/261 (17%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K + + Y ++I + KR +++Q +K ++ D YN + AG
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK--EVGIRPDVCTYNTLLSGSCKAG 437
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ E L M C PSV TF
Sbjct: 438 DFAAVDELLGKMIDDGCQPSVITF-----------------------------------G 462
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G ++ A +L + PN Y+TL+ LC++G+V+ A L + M+ +
Sbjct: 463 TLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL-----YGLLDK- 316
+ A+ TFN L+ GLR + E+ +L+++M+ + C+P+ + ++ G D+
Sbjct: 523 SVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRL 582
Query: 317 KRFPEAKELVG--RMICERMS 335
KRF + E R++ +R S
Sbjct: 583 KRFMQQGEHTASKRIVSDRTS 603
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 2/166 (1%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L Q K P+ Y +++ +A F A+++++ ++ ++ C+ S F ++ Y
Sbjct: 410 LLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKM-IDDGCQPSVITFGTLVHGY 468
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+ G+I +A+ L M P+ +N +++ L ++ + V +
Sbjct: 469 CKV-GKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
N LLKGL + E AF ++D+ ++ C P+ T LM L
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 147/313 (46%), Gaps = 6/313 (1%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
+P +++LN+ K K + +Y II+ L + K D D+ +++ + + D F
Sbjct: 230 EPDLALNLLNKMEKGK-IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI--KPDVF 286
Query: 130 FYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
YN +I N GR S A L DM N P + FN +++ V E + +Y
Sbjct: 287 TYNPLISCLCNY-GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 189 AAKLG-VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
K D N L+KG C+ +E V E ++ N TY+TL+HG +
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+ + A + ++M S+G+ D +T+NIL+ GL G VE + + E M+ + + +Y
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ L + + +L + + + P+ V+Y ++ G C + L E+ D + +M +
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Query: 368 GFVPRMGMWREIV 380
G +P G + ++
Sbjct: 526 GPLPNSGTYNTLI 538
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ AI DM +PS+ F+ +L+ + + + + LG+ + +
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I + C L A +L + K P++ T ++L++G C + EA L+++M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G DTVTF L+ GL + K E + L+ERM KGC P+ +Y V+ GL + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ V Y +I GLC K ++D + KM +G P + + ++ C
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 383 V 383
+
Sbjct: 295 L 295
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 160/346 (46%), Gaps = 22/346 (6%)
Query: 11 HRQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRD 70
HR +++ + +T+ +R+FA AS ++ K+ +L+
Sbjct: 14 HRHTVLLKGNPRTTLCWERSFAGASSDDCRENLSR-----------------KVLQDLKL 56
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
I + K + + P+ ++ +++ +A+ +FD + + +++ + L + +
Sbjct: 57 D-DAIGLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQM--QNLGISHNLYT 112
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
Y++ Y ++S A+ L M PS+ T N +LN E +
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
++G + D L+ GL ++ A +++ + C+P++ TY +++GLC++G +
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A LL +ME I+AD V +N +I GL K +++ L +M+ KG P+ +Y ++
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVE 355
L + R+ +A L+ M+ + ++P V + LI + KLVE
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE 338
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 1/245 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K+ NP+ + +I+ + + E + + K C F D YN + R+
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC-FPDVVAYNTLIKGFCKYKRV 372
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ +E +M + T+ +++ A+ Q ++ GV D NIL
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GLC NGN+E A V + K++ + ++ TY+T++ LC+ G VE+ + L + +G+
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ VT+ ++SG ++G EE L MK G PNS +Y ++ L + E
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 325 LVGRM 329
L+ M
Sbjct: 553 LIKEM 557
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+++ +N I KLG LN LL G C + A ++D+
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ +P+ T++TL+HGL + EA L+ERM +G D VT+ +I+GL K+G+
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ + LL +M+ + Y ++ GL K +A +L +M + + P +Y L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
I LCN D +L M+++ P + + ++
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D C N+ K L ++ L+ A + + K P++ +S L+ + + +
Sbjct: 36 GASSDDCRENLSRKVL-QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLV 94
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L E+M++ GI + T++I I+ ++ ++ + +L +M G P+ + +L G
Sbjct: 95 ISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNG 154
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
R EA LV +M+ P V++ L+HGL + ++++MV +G P
Sbjct: 155 FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 214
Query: 373 MGMWREIV 380
+ + ++
Sbjct: 215 LVTYGAVI 222
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 3/197 (1%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N YT +I+ QA+ D + + +++ + + D YN++ G + A+
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV--HPDIMTYNILLDGLCNNGNVETALV 447
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
M + + T+ ++ L A + ++ S + GV+ + ++ G C
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
G E A + E + PN TY+TL+ G+ + L++ M S G D
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567
Query: 270 TFNILISGLRKQGKVEE 286
TF L++ + G++++
Sbjct: 568 TFG-LVTNMLHDGRLDK 583
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 115/229 (50%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ E + M PS++ N +L L+ A + + G+ D
Sbjct: 187 GRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTY 246
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L++ C+ +LE+A V++E + C NV TY+TL+ GLC G +EEAFG + ME
Sbjct: 247 STLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMED 306
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D T+ +I+GL K+G+ ++ LL+ M G PN Y ++ G + + E
Sbjct: 307 YGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADE 366
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
A ++V M + P+ ++Y LI GLC + +LK+M + G++
Sbjct: 367 AFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYM 415
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 146/320 (45%), Gaps = 17/320 (5%)
Query: 85 KDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-- 140
+DY P+ Y IIN L + R D + ++ + G NV+ +Y +
Sbjct: 305 EDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCA-------GLMPNVV-VYSTLID 356
Query: 141 ----AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G +A + + +M + P+ T++ ++ L G I K+G
Sbjct: 357 GFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMA 416
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N++++G N E AF +L+E K PNV TYS +++GLC+ G E A GLL
Sbjct: 417 DTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLL 476
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E+M ++G+ + + LISG ++G + L++M + P+ Y ++ GL +
Sbjct: 477 EQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNV 536
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ EA E M+ + P+ +Y LIHG +E + +L +M+ G P ++
Sbjct: 537 GKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIY 596
Query: 377 REIVGCVTFGKDNRNRVYVT 396
+I+ F DN +V T
Sbjct: 597 AQILEGY-FKSDNLEKVSST 615
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 140/314 (44%), Gaps = 3/314 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ Y+ +I + + ++ + +++ ++ E C + YN + AG I +A
Sbjct: 240 SPDVYTYSTLIEAYCKVRDLESAKKVVEEMR-ETGCSL-NVVTYNTLIGGLCRAGAIEEA 297
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M Y P T+ ++N L + + + + G+ + + L+ G
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
GN + AF ++ E +PN TY L+ GLC+ G + A +L++M G AD
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+T+N++I G +Q EE LL M+ G PN +Y ++ GL A L+
Sbjct: 418 TMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLE 477
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE-IVGCVTFG 386
+MI + + P+ Y LI G C + LKKM ++ P + + I+G G
Sbjct: 478 QMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVG 537
Query: 387 KDNRNRVYVTETVD 400
K + Y E ++
Sbjct: 538 KMDEAIEYYDEMLE 551
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 139/309 (44%), Gaps = 2/309 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +Y +I+ + F + ++++ E L D + YN + I + G++ +AI
Sbjct: 486 PNAFVYAPLISGYCREGSFSLACETLKKMTRENLT--PDLYCYNSLIIGLSNVGKMDEAI 543
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E +M P+ T+ +++ A + + + G+ + +L+G
Sbjct: 544 EYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGY 603
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
++ NLE L ++ P+ R Y ++H L G+++ A +L +E G+ D+
Sbjct: 604 FKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDS 663
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+ + LISG K +E+ + LL+ M KG P + Y ++ G A+ +
Sbjct: 664 LIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNS 723
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
+IC+ + P+ V+Y LI G C + D + +M+ +G P ++ + + D
Sbjct: 724 IICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGD 783
Query: 389 NRNRVYVTE 397
+ +++TE
Sbjct: 784 LQQALFITE 792
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 133/283 (46%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +Y+ +I+ + D I++ + + + + + N+I+ + GR+ +A
Sbjct: 346 PNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGV-QPNKITYDNLIRGLCKL-GRMGRAS 403
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M T+NLV+ + E + K G+ + +I++ GL
Sbjct: 404 RILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGL 463
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G E A +L++ +PN Y+ L+ G C +G+ A L++M E + D
Sbjct: 464 CQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDL 523
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+N LI GL GK++E ++ + M KG PN +Y +++G +A++L+ +
Sbjct: 524 YCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQ 583
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ ++P+ Y +++ G +E V LK M+++G +P
Sbjct: 584 MLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMP 626
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 130/296 (43%), Gaps = 3/296 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + PN+ Y +I+ + A + E ++ ++ L +D + +++ Y + +
Sbjct: 552 KGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGL-NPNDFIYAQILEGYFK-SDNL 609
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
K TL M P + + +V++ L S+ + + K G+ D+ L
Sbjct: 610 EKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSL 669
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C+ ++E A +LDE K+ EP + Y+ L+ G C+ ++ A + + +G+
Sbjct: 670 ISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGL 729
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ VT+ LI G K G + + + L M +G P++ Y + G + +A
Sbjct: 730 PPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALF 789
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ MI R S+ L+HG C + +++ L M+ + VP + IV
Sbjct: 790 ITEEMIA-RGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIV 844
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 8/290 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFD-AIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
R++ P+ Y +I L+ + D AIE D M +EK + +D + +I Y +M
Sbjct: 516 RENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEM----LEKGFQPNDFTYGGLIHGY-SM 570
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + KA + L M + P+ + +L + ++ S + G+ D
Sbjct: 571 AGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRL 630
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
I++ L +G+++AA VL K P+ Y +L+ G C+ ++E+A GLL+ M
Sbjct: 631 YGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMA 690
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+GI+ +N LI G K + + + KG PN +Y ++ G
Sbjct: 691 KKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIR 750
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+A +L M+ E ++P Y L G N ++ ++ ++M+ +G+
Sbjct: 751 DAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYA 800
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 1/200 (0%)
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
LG+ C N LLK L L+ + V P+V TYSTL+ C+ ++E
Sbjct: 202 LGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLES 261
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A ++E M G + VT+N LI GL + G +EE + M+ G P+ +Y ++
Sbjct: 262 AKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIIN 321
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
GL + R +AK L+ M C + P+ V Y LI G Q ++ ++K+M G P
Sbjct: 322 GLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQP 381
Query: 372 RMGMWREIV-GCVTFGKDNR 390
+ ++ G G+ R
Sbjct: 382 NKITYDNLIRGLCKLGRMGR 401
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 120/287 (41%), Gaps = 18/287 (6%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+ LY ++I+ L+ + A ++ I EK D Y + A +
Sbjct: 622 KGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVI--EKNGLVPDSLIYGSLISGFCKAADM 679
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA+ L +M P + +N +++ + + I+ S G+ + L
Sbjct: 680 EKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTL 739
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C+ G++ A + +E + P+ YS L G G++++A + E M + G
Sbjct: 740 IDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGY 799
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
A +FN L+ G K+GK++E +K L M K P+ + + ++ GL + + EA
Sbjct: 800 -AIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHT 858
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + +L + + + + + M+ QG VP
Sbjct: 859 I---------------FVELQQKNASHRDTDHLSSLFTDMINQGLVP 890
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERM----------------ESEGIDAD--TVTFN 272
P ++ L LC G +A GLL++M G D V +
Sbjct: 118 PAPDAFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGRRPVVLD 177
Query: 273 ILISGLRKQGKVEEGMKLLERMK-----------------------------------GK 297
+L+ +K G+V +G +++ MK G
Sbjct: 178 VLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGA 237
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G P+ +Y ++ + AK++V M S + V+Y LI GLC +E+
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297
Query: 358 DWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTE 397
K+M G VP + I+ G G+ ++ + + E
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDE 338
>gi|293332227|ref|NP_001169164.1| uncharacterized protein LOC100383014 [Zea mays]
gi|223975267|gb|ACN31821.1| unknown [Zea mays]
Length = 469
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 5/209 (2%)
Query: 126 SDGFF-----YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
SDG YN++ AG + +A+ET+ M P++ TFN ++N +
Sbjct: 213 SDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVH 272
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ + + G+ D L+ GLC L+ AF E + PNV+TY+ L+
Sbjct: 273 DAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLI 332
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
HGLC G+V +A LL +M+ +GI D +FN I + K+E+ KL M G
Sbjct: 333 HGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVS 392
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRM 329
P+S +Y ++ L D++R EAKE++ M
Sbjct: 393 PDSYTYNALIKALCDERRVDEAKEIILAM 421
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 6/224 (2%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACC 200
ISKA + M S SV+++N+V++ A GE++ + + G +
Sbjct: 201 ISKANKYFSQMVSDGLLSSVESYNIVIDCFAKA---GEVERALETIKVMQESGFSPNLVT 257
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G + GN+ A L + P+V T+++L+ GLC +++AF M
Sbjct: 258 FNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMS 317
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ + T+N+LI GL G V + ++LL +MK G P++ S+ + ++
Sbjct: 318 EWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIE 377
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+A++L M +SP +Y LI LC+++ V++ ++ M
Sbjct: 378 KAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAM 421
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 91/163 (55%), Gaps = 8/163 (4%)
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283
P C P+ TY+TL+HG+C +G V+EA L+++ME GI + VT+ +L+ G +
Sbjct: 1 MPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASR 60
Query: 284 VEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM--SPSF--V 339
VEE + +LERMK KG A+Y+ +++G R E KE RM+ E + P+ +
Sbjct: 61 VEEAVCVLERMKEKGVSATEATYRSLVHGAF---RCLE-KERAYRMLSEWIESDPTLHSI 116
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
+Y L++ L + ++ + KKM ++G++ + ++ C
Sbjct: 117 AYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPC 159
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NI++ + G +E A + + PN+ T++TL++G + GNV +A L+ +
Sbjct: 224 NIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVME 283
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D +TF LI GL ++++ M G PN +Y +++GL +
Sbjct: 284 HGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSK 343
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A EL+ +M + ++P S+ I C + +E + M + G P
Sbjct: 344 AIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSP 393
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 4/202 (1%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D N L+ G+C G ++ A ++ + + PNV TY+ L+ G C VEEA
Sbjct: 5 GCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEA 64
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+LERM+ +G+ A T+ L+ G + + E ++L +S +Y +LY
Sbjct: 65 VCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYC 124
Query: 313 L----LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
L +DK+ AK++ R + + + L + L E VD +KK G
Sbjct: 125 LSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLG 184
Query: 369 FVPRMGMWREIVGCVTFGKDNR 390
F + + + + C K N+
Sbjct: 185 FDMYIMIIKSFLRCKDISKANK 206
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 106/239 (44%), Gaps = 7/239 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF--FYNVIKIYGNMAGRISKAIETL 151
Y ++I+ A+A +E ++ IKV + FS F +I Y + G + A L
Sbjct: 223 YNIVIDCFAKAGE---VERALETIKVMQESGFSPNLVTFNTLINGYLKL-GNVHDAKAFL 278
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+ + P V TF +++ L + ++ ++ GV + N+L+ GLC
Sbjct: 279 KMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSA 338
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G++ A +L++ P+ +++ + C +E+A L M G+ D+ T+
Sbjct: 339 GHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTY 398
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCY-PNSASYQEVLYGLLDKKRFPEAKELVGRM 329
N LI L + +V+E +++ M+ C +Y V+ L RF EA + ++
Sbjct: 399 NALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRFSEAGMFMNKL 457
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
+V +Y+ ++ + G VE A ++ M+ G + VTFN LI+G K G V + L
Sbjct: 219 SVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFL 278
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ + G P+ ++ ++ GL + +A M + P+ +Y LIHGLC+
Sbjct: 279 KMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSA 338
Query: 352 KLVEDVDWVLKKMVQQGFVP 371
V +L KM G P
Sbjct: 339 GHVSKAIELLNKMKMDGITP 358
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 138/306 (45%), Gaps = 18/306 (5%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+R PN YT++++ A R + +++R+K EK ++ + +++ + A
Sbjct: 37 ERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMK-EKGVSATEATYRSLV----HGAF 91
Query: 143 RISKAIETLFDMPSYNCW----PSVKT--FNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
R + E + M S W P++ + ++ +L L + E + +K G +
Sbjct: 92 RCLEK-ERAYRMLSE--WIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLL 148
Query: 197 DACCLNILLKGLCENGNLEAA--FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ +I++ C LE++ ++D+F K+ Y ++ ++ +A
Sbjct: 149 GSTTFSIVIP--CAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANK 206
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+M S+G+ + ++NI+I K G+VE ++ ++ M+ G PN ++ ++ G L
Sbjct: 207 YFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYL 266
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+AK + ++ + P +++ LI GLC+ ++D +M + G P +
Sbjct: 267 KLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQ 326
Query: 375 MWREIV 380
+ ++
Sbjct: 327 TYNVLI 332
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 98/233 (42%), Gaps = 8/233 (3%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
MP+ C P T+N +++ + + E + + G+ + +L+ G C
Sbjct: 1 MPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASR 60
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD----TV 269
+E A VL+ ++ TY +L+HG E A+ RM SE I++D ++
Sbjct: 61 VEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAY----RMLSEWIESDPTLHSI 116
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
++ L+ L K +E ++L ++M +G S ++ V+ + + ELV
Sbjct: 117 AYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDF 176
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
I + + F Y +I K + + +MV G + + + ++ C
Sbjct: 177 IKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDC 229
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 140/297 (47%), Gaps = 5/297 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K ++P Y ++N +A R D +M+R+K R G Y+ + I G
Sbjct: 186 KGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTG--RSPSGSLYSTL-IDGLCKHDR 242
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
LF+M + + + + + L + KL E + ++ + G D N++
Sbjct: 243 HDEARELFEMAAGDVQDVIVYTSFISGLCKAGKL-DEAKAVHVKMIEAGCAPDPVSYNVI 301
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ LC++ + A ++D+ ++ C P V + L+ GLC+ VEEA +LERM G
Sbjct: 302 IYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGD 361
Query: 265 DADTV-TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
A +V T++ +I GL K ++++ +L++M+ GC P+ +Y ++ R EA+
Sbjct: 362 RAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAR 421
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL RM + V+Y LI G C V++ ++++M +G P + IV
Sbjct: 422 ELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIV 478
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 3/246 (1%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
+YT I+ L +A + D + + ++ +E C D YNVI R+S+A E +
Sbjct: 262 VYTSFISGLCKAGKLDEAKAVHVKM-IEAGCA-PDPVSYNVIIYSLCKDNRVSEAKELMD 319
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL-NILLKGLCEN 211
C P V ++++ L ++ E I + G + + ++ GLC+
Sbjct: 320 QAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKA 379
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
L+ A+ VL + + C P+V TY+ ++ C+ G ++EA L +RM G D V +
Sbjct: 380 DRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAY 439
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
NILI G + KV+E + ++E M G+G PN S ++ GL + R EA+ L+ +M
Sbjct: 440 NILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNF 499
Query: 332 ERMSPS 337
E + S
Sbjct: 500 ESLPDS 505
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 122/264 (46%), Gaps = 4/264 (1%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F Y + A +I +A+ L +M + P++ TF ++ L + I+
Sbjct: 51 DDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIF 110
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ V+ DA +++ LC+ L+ A + + C P+ TY+ L+H L +
Sbjct: 111 HQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKA 170
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
E+ + E M S+G + VT+ +++G K G++++ + L+ R+KG G P+ + Y
Sbjct: 171 CKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLY 230
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL R EA+EL M + V Y I GLC +++ V KM++
Sbjct: 231 STLIDGLCKHDRHDEARELF-EMAAGDVQDVIV-YTSFISGLCKAGKLDEAKAVHVKMIE 288
Query: 367 QGFVPRMGMWREIVGCVTFGKDNR 390
G P + I+ + KDNR
Sbjct: 289 AGCAPDPVSYNVII--YSLCKDNR 310
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 121/290 (41%), Gaps = 38/290 (13%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F Y V+ + ++ A M C P T+ ++++ L A + + I+
Sbjct: 121 DAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIF 180
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
G + ++ G C+ G ++ A ++ P+ YSTL+ GLC+
Sbjct: 181 EEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKH 240
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+EA L E + G D + + ISGL K GK++E + +M GC P+ SY
Sbjct: 241 DRHDEARELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSY 298
Query: 307 QEVLYGLLDKKRFPEAKELVGR------------------------------MICERM-- 334
++Y L R EAKEL+ + +I ERM
Sbjct: 299 NVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLE 358
Query: 335 ----SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+PS V+Y +I GLC ++D VL+KM + G VP + + I+
Sbjct: 359 TGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAII 408
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 50/119 (42%)
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G +T T N L+ G E ++ + P+ +Y ++ G ++ P+A
Sbjct: 12 GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
L+G M ++P+ V++ LI LC + + +M+ P ++ ++G
Sbjct: 72 VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIG 130
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 15/288 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P + Y + I L + R D +++ + D YN + ++G + R
Sbjct: 377 PTTSTYNIYIRALCEFGRIDDARELLSSMAA------PDVVSYNTL-MHGYIKMRKFVEA 429
Query: 149 ETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI---DACCLNIL 204
LFD + + N PS+ T+N +++ L + G ++G ++ ++ D L
Sbjct: 430 SLLFDDLKAGNINPSIVTYNTLIDGLCES---GNLEGAQRLKEEMTSQLIYPDVITYTTL 486
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
LKG +NGNL A + DE ++ +P+ Y+T G G+ E+AF L E M +E
Sbjct: 487 LKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDH 546
Query: 265 DA-DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
A D +N+ I GL K G +E+ ++ ++ G P+ +Y V+ G L+K RF A+
Sbjct: 547 HAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMAR 606
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L M+ +R+SPS ++Y LIHG +E +M ++G P
Sbjct: 607 DLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRP 654
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PSV+ N+VL +L +++ + Q +Y + G+ N +L + G+LE +
Sbjct: 237 PSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKI 296
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
E ++N E + TY+ L++G + G +EEA M+ G +FN LI G K
Sbjct: 297 WLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCK 356
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
QG +E + + M G YP +++Y + L + R +A+EL+ M +P VS
Sbjct: 357 QGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM----AAPDVVS 412
Query: 341 YKKLIHGLCN-QKLVE 355
Y L+HG +K VE
Sbjct: 413 YNTLMHGYIKMRKFVE 428
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 129/296 (43%), Gaps = 19/296 (6%)
Query: 83 KRKDYNPNEALYTLIIN------KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
KR++ +E Y ++IN K+ +A+RF MQR + +S F +I+
Sbjct: 301 KRRNIEFSEVTYNILINGFSKSGKMEEARRFHGD---MQRSGF-PVTPYS---FNPLIEG 353
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
Y G +A +M + +P+ T+N+ + L + + + +S A
Sbjct: 354 YCKQ-GLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAA----P 408
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ G + A + D+ N P++ TY+TL+ GLCE GN+E A L
Sbjct: 409 DVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLK 468
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E M S+ I D +T+ L+ G K G + ++ + M KG P+ +Y G L
Sbjct: 469 EEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRL 528
Query: 317 KRFPEAKELVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A L M+ E +P Y I GLC +E +K+ + G VP
Sbjct: 529 GDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVP 584
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 23/300 (7%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR--FSDGFFYNVIKIYGNM 140
K + NP+ Y +I+ L ++ + QR+K E + + D Y +
Sbjct: 437 KAGNINPSIVTYNTLIDGLCESGNLEGA----QRLKEEMTSQLIYPDVITYTTLLKGFVK 492
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ-GIYTSAAKLGVEI--- 196
G +S A E +M P + + + GE++ G A +L E+
Sbjct: 493 NGNLSMATEIYDEMLRKGIKPDGYAY--------TTRTVGELRLGDSEKAFRLHEEMVAE 544
Query: 197 -----DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
D N+ + GLC+ GNLE A + + P+ TY+T++ G EKG +
Sbjct: 545 DHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKM 604
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A L + M S+ + +T+ +LI G K G++E+ + MK +G PN ++ +L+
Sbjct: 605 ARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLH 664
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G+ EA + +M E +SP+ SY LI C+ E+V + K+M+ + P
Sbjct: 665 GMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEP 724
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG + + + +M N S T+N+++N + E + + + G +
Sbjct: 287 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYS 346
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L++G C+ G + A+ V DE P TY+ + LCE G +++A LL M
Sbjct: 347 FNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMA 406
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ D V++N L+ G K K E L + +K P+ +Y ++ GL +
Sbjct: 407 A----PDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLE 462
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A+ L M + + P ++Y L+ G + + +M+++G P
Sbjct: 463 GAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKP 513
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
++G+ D +++G E G + A + DE + P+V TY L+HG + G +E
Sbjct: 579 RVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLE 638
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+AF M+ G+ + +T N L+ G+ K G ++E + L +M+ +G PN SY ++
Sbjct: 639 QAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILI 698
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
D ++ E +L M+ + + P +++ L L
Sbjct: 699 SKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 736
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NI+L+ L ++ + A V + P V T++T++ + G++E + M+
Sbjct: 243 NIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 302
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
I+ VT+NILI+G K GK+EE + M+ G S+ ++ G + F E
Sbjct: 303 RNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDE 362
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
A + M+ + P+ +Y I LC ++D +L M V
Sbjct: 363 AWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAPDVV 411
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 6/196 (3%)
Query: 87 YNPNEALYTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRI 144
+ P+ +Y + I+ L + + AIE QR K+ ++ D Y + I G + GR
Sbjct: 547 HAPDLTIYNVRIDGLCKVGNLEKAIE--FQR-KIFRVGLVPDHVTYTTV-IRGYLEKGRF 602
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + +M S PSV T+ ++++ A + T K GV + N L
Sbjct: 603 KMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 662
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L G+C+ GN++ A+ L + ++ PN +Y+ L+ C+ EE L + M + I
Sbjct: 663 LHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEI 722
Query: 265 DADTVTFNILISGLRK 280
+ D T L L K
Sbjct: 723 EPDGYTHRALFKHLEK 738
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 143/317 (45%), Gaps = 17/317 (5%)
Query: 70 DPISVISVLNQYSKRK---------------DYNPNEALYTLIINKLAQAKRFDAIEDIM 114
D +++ S++N + +R Y P+ Y II+ L + +R + D
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFF 213
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ I K R + + ++ N +GR + A L DM P+V T++ +L+ V
Sbjct: 214 KEIG-RKGIRPNVVTYTALVNGLCN-SGRWNDAARLLRDMIKRKITPNVITYSALLDAFV 271
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E + I+ ++ ++ D + L+ GLC + ++ A + D + C P+V
Sbjct: 272 KNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVV 331
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
+Y+TL++G C+ VE+ L +M G+ +TVT+N LI G + G V++ + +M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM 391
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
G P+ +Y +L GL D +A + M M V+Y +I G+C V
Sbjct: 392 DSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKV 451
Query: 355 EDVDWVLKKMVQQGFVP 371
ED + + +G P
Sbjct: 452 EDAWGLFCSLSLKGLKP 468
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 2/282 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +++ + + K++D + + + K+E L +D + +N++ ++S A+
Sbjct: 83 PSIVDFNRLLSAIVKMKKYDVVISLGK--KMEVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M P T ++N + + ++G D N ++ L
Sbjct: 141 SVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSL 200
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ + A E ++ PNV TY+ L++GLC G +A LL M I +
Sbjct: 201 CKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNV 260
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T++ L+ K GKV E ++ E M P+ +Y ++ GL R EA ++
Sbjct: 261 ITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
M+ + P VSY LI+G C K VED + +KM Q+G V
Sbjct: 321 MVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLV 362
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 135/294 (45%), Gaps = 16/294 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFD----AIEDIMQRIKVEKLCRFS---DGFFYNVIKI 136
RK PN YT ++N L + R++ + D+++R + +S D F N
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKN---- 273
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G++ +A E +M + P + T++ ++N L E ++ G
Sbjct: 274 -----GKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFP 328
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ G C+ +E + + ++ N TY+TL+ G + G+V++A
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFF 388
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+M+S G+ D T+NIL+ GL G +E+ + + E M+ + +Y V+ G+
Sbjct: 389 SQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKT 448
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ +A L + + + P V+Y ++ GLC + L +V+ + KM Q+G +
Sbjct: 449 GKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLM 502
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+S A+ + M P + +N +++ L + + + + G+ +
Sbjct: 170 RVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYT 229
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC +G A +L + K+ PNV TYS L+ + G V EA + E M
Sbjct: 230 ALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRM 289
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
ID D VT++ LI+GL +++E ++ + M KGC+P+ SY ++ G KR +
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDG 349
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+L +M + + V+Y LI G V+ +M G P + + ++G
Sbjct: 350 MKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLG 408
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 112/238 (47%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ AI +M +PS+ FN +L+ +V K Y + + LG+ D N
Sbjct: 65 KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ C + A VL + K EP+ T +L++G C + V +A L+++M
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D V +N +I L K +V + + + + KG PN +Y ++ GL + R+ +A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ MI +++P+ ++Y L+ V + + ++MV+ P + + ++
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLI 302
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
TFN+V+N + KLG E D + L+ G C + A ++D+
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ P++ Y+ ++ LC+ V +A + + +GI + VT+ L++GL G+
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ +LL M + PN +Y +L + + EAKE+ M+ + P V+Y L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I+GLC +++ + + MV +G P
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFP 328
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA DM P+V T+ +V++ L A++ +G++ GV +
Sbjct: 218 GQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTY 277
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ G G + +L E EP+ TY L+ LC+KG EA L + M
Sbjct: 278 TCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIR 337
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI D + I++ G +G + E L+ M G G PN + V K E
Sbjct: 338 KGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGE 397
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ++ +M + +SP+ V+Y LI LC V+D + +M+ +G P + ++ +V
Sbjct: 398 AMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLV 456
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 125/292 (42%), Gaps = 37/292 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN YT++I+ L +A+ D E + Q++ I K +
Sbjct: 237 PNVVTYTIVIDGLCKAQVVDRAEGVFQQM--------------------------IDKGV 270
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
P++ T+ +++ +S + E+ + + G+E D +LL L
Sbjct: 271 R-----------PNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYL 319
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G A + D ++ +P+V Y ++HG KG + E L+ M GI +
Sbjct: 320 CKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNH 379
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
FNI+ K+ + E M + +M+ +G PN +Y ++ L R +A+ +
Sbjct: 380 YIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQ 439
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI E ++P+ V + L++GLC E + +MV QG P + + I+
Sbjct: 440 MINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIM 491
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 4/216 (1%)
Query: 169 VLNLLVSAKLYGEIQGIYTS-AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK- 226
+L L AK GE G+ ++LG + N LLKG C+ E A +L
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195
Query: 227 --QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
++C PN+ +Y+T+++G +G V++A+ L M +GI + VT+ I+I GL K V
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ + ++M KG PN +Y +++G L ++ E ++ M + P +Y L
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ LC + + + M+++G P + ++ I+
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIIL 351
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ FN+V + GE I+ + G+ + L+ LC+ G ++ A
Sbjct: 377 PNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELK 436
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
++ + PN+ +++L++GLC E+A L M ++GI + V FN ++ L
Sbjct: 437 FNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCT 496
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G+V + +L++ M+ G P+ SY ++ G + EA +L+ M+ + P+ +
Sbjct: 497 EGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECT 556
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y L+HG C ++D V ++M+ G P + + I+
Sbjct: 557 YNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTIL 596
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 122/285 (42%), Gaps = 2/285 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK P+ ++Y +I++ A + + + + + + +N++
Sbjct: 337 RKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGIS--PNHYIFNIVFCAFAKKAM 394
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I +A++ M P+V + +++ L + + + GV +
Sbjct: 395 IGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTS 454
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC E A + E Q PNV ++T+M LC +G V +A L++ ME G
Sbjct: 455 LVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVG 514
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D +++N LI G GK +E KLL+ M G PN +Y +L+G R +A
Sbjct: 515 TRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAY 574
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ M+ ++P V+Y ++HGL + + + M+ G
Sbjct: 575 SVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSG 619
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 133/302 (44%), Gaps = 12/302 (3%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+++ +PN Y +I+ L + R D E +K ++ ++G N++ + G
Sbjct: 406 RQQGLSPNVVNYATLIDALCKLGRVDDAE-----LKFNQM--INEGVAPNIVVFTSLVYG 458
Query: 143 -----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+ KA E F+M + P+V FN ++ L + + Q + ++G D
Sbjct: 459 LCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPD 518
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L++G C G + A +LD +PN TY+TL+HG C G +++A+ + +
Sbjct: 519 IISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQ 578
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M S GI VT+N ++ GL K + E +L M G + +Y +L GL
Sbjct: 579 EMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNN 638
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
EA ++ + + + +++ +I L ED + + G VP + +R
Sbjct: 639 CVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYR 698
Query: 378 EI 379
I
Sbjct: 699 LI 700
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 14/275 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------ 141
+PN ++ ++ A+ DI +++ + G NV+ Y +
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQ-------GLSPNVVN-YATLIDALCKL 427
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ A M + P++ F ++ L + + + ++ G+ +
Sbjct: 428 GRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFF 487
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ LC G + A ++D + P++ +Y+ L+ G C G +EA LL+ M S
Sbjct: 488 NTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLS 547
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ + T+N L+ G + G++++ + + M G P +Y +L+GL +RF E
Sbjct: 548 VGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSE 607
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
AKEL MI S +Y +++GL V++
Sbjct: 608 AKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDE 642
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 109/251 (43%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
F+N I GR+ KA + M P + ++N ++ E +
Sbjct: 486 FFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIM 545
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+G++ + C N LL G C +G ++ A+ V E P V TY+T++HGL +
Sbjct: 546 LSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRF 605
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EA L M + G T+NI+++GL K V+E +K+ + + K + ++ +
Sbjct: 606 SEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIM 665
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ LL R +A L + + P +Y+ + L + +E+ D + +M + G
Sbjct: 666 IGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGC 725
Query: 370 VPRMGMWREIV 380
P M +V
Sbjct: 726 APNSLMLNFLV 736
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEKGNVEEA 252
V D +IL+ C G LE F K +V + L+ GLC+ V EA
Sbjct: 90 VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149
Query: 253 FG-LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM---KGKGCYPNSASYQE 308
G LL RM G + V++N L+ G + + EE ++LL M + + C PN SY
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
V+ G + + +A L M + + P+ V+Y +I GLC ++V+ + V ++M+ +G
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269
Query: 369 FVPR-------------MGMWREIV 380
P +G W+E+V
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVV 294
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 100/243 (41%), Gaps = 18/243 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-----R 143
PNE Y +++ + R D + Q + S+G V+ + G R
Sbjct: 552 PNECTYNTLLHGYCRDGRIDDAYSVFQEM-------LSNGITPVVVTYNTILHGLFKTRR 604
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
S+A E +M + S+ T+N++LN L E ++ S +++D NI
Sbjct: 605 FSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNI 664
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ L ++G E A + P+V TY + L E+G++EE G+ ME G
Sbjct: 665 MIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSG 724
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK-----KR 318
+++ N L+ L +G + L ++ K + AS +L L + K
Sbjct: 725 CAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKN-FSLEASTTSMLISLFSREEHQAKS 783
Query: 319 FPE 321
PE
Sbjct: 784 LPE 786
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 134/286 (46%), Gaps = 4/286 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMA 141
K P Y ++N L A D+ E + + ++ ++ D YN +IK Y A
Sbjct: 214 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRI--KPDIVTYNTMIKGYCK-A 270
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+ KA+E L DM + T+ ++ + +G +Y + G+++
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++++ GLC+ G L + V + ++ +PNV Y+ L+ G + G+VE+A LL RM
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EG D VT++++++GL K G+VEE + + G NS Y ++ GL R E
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
A+ L M + + Y LI + V++ + K+M ++
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE 496
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 136/321 (42%), Gaps = 37/321 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+K Y N Y +++ LA AK D I + IK + + +IK +G + G
Sbjct: 144 KQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEF-PMTVSAANALIKSFGKL-G 201
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ + + M P++ T+N ++N LVSA + ++ ++ D N
Sbjct: 202 MVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYN 261
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH--------------------- 241
++KG C+ G + A L + + E + TY T++
Sbjct: 262 TMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEK 321
Query: 242 --------------GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
GLC++G + E + + E M +G + + +LI G K G VE+
Sbjct: 322 GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDA 381
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
++LL RM +G P+ +Y V+ GL R EA + + ++ + + Y LI G
Sbjct: 382 IRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDG 441
Query: 348 LCNQKLVEDVDWVLKKMVQQG 368
L V++ + + ++M ++G
Sbjct: 442 LGKAGRVDEAERLFEEMSEKG 462
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 129/302 (42%), Gaps = 49/302 (16%)
Query: 127 DGFFYN-VIKIYGNMAGRISKAIETLFDMP----SYNCWPSVK---TFNL-----VLNLL 173
DGF +IK+ N + K+ E + + P S+ CW + T NL ++++L
Sbjct: 104 DGFCRKFLIKLSPNFVSFVLKSDE-IREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVL 162
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
AK I+ + + K + N L+K + G +E +V + + EP +
Sbjct: 163 ALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTL 222
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY+ LM+GL V+ A + E MES I D VT+N +I G K G+ ++ M+ L
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD 282
Query: 294 MKGKG--------------CYPNS------ASYQE---------------VLYGLLDKKR 318
M+ +G CY +S A YQE V+ GL + +
Sbjct: 283 METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK 342
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
E + MI + P+ Y LI G VED +L +M+ +GF P + +
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Query: 379 IV 380
+V
Sbjct: 403 VV 404
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 16/216 (7%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N Y+ +I+ L +A R D E + + + EK C D + YN + ++ +AI
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMS-EKGCT-RDSYCYNALIDAFTKHRKVDEAIA 488
Query: 150 TLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M C +V T+ ++L+ + E ++ G+ A C L GL
Sbjct: 489 LFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGL 548
Query: 209 CENGNLEAAFYVLDEFPKQN------CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
C +G + A +LDE CE + T LC+ G ++EA L + +
Sbjct: 549 CLSGKVARACKILDELAPMGVILDAACEDMINT-------LCKAGRIKEACKLADGITER 601
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
G + ++I+ LRK GK + MKL+ G G
Sbjct: 602 GREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIG 637
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 113/248 (45%), Gaps = 12/248 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK PN A+YT++I+ A++ + ++ R+ E D Y+V+ GR
Sbjct: 355 RKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF--KPDVVTYSVVVNGLCKNGR 412
Query: 144 ISKAIETL----FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ +A++ FD + N ++ +++ L A E + ++ ++ G D+
Sbjct: 413 VEEALDYFHTCRFDGLAINSM----FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
C N L+ ++ ++ A + ++ C+ V TY+ L+ G+ ++ EEA L +
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDM 528
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M +GI F L +GL GKV K+L+ + G ++A ++++ L R
Sbjct: 529 MIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGR 587
Query: 319 FPEAKELV 326
EA +L
Sbjct: 588 IKEACKLA 595
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 6/299 (2%)
Query: 85 KDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMA 141
KD N P++ Y ++ L++ D + ++ + RF D Y+ I
Sbjct: 302 KDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEER---RFRVDKVGYSAIVHSFCRE 358
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ KA E + +M S C P V T+ V+N L + + + + K G + +
Sbjct: 359 GRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSY 418
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
LL GLC+NGN A +++ + PN TYS LMHG +G EA L+ M
Sbjct: 419 TALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIK 478
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G V N+LI L ++ KV+E + +E+ GC N ++ V++G K
Sbjct: 479 KGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEA 538
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A L+ M P V+Y +I L + +E+ + KM++ G +P +R ++
Sbjct: 539 ALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVI 597
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 158/308 (51%), Gaps = 13/308 (4%)
Query: 68 LRDPISVISVLNQYSKRKDYN-PNEALYTLII-NKLAQAKRFDAIEDIMQRIKVEKLCRF 125
LR+ + V++++ + D + N A++ L++ N+L +A RF + MQ +++E
Sbjct: 185 LRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF---LERMQIVEIE----- 236
Query: 126 SDGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
+ YN +IK Y ++ R+ A+E + +MP C P ++ V+ L K E++
Sbjct: 237 PNVITYNCLIKGYCDLH-RLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRL 295
Query: 185 IYTSAAK-LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ K + D N + L ++G+ + A L E ++ + YS ++H
Sbjct: 296 LMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSF 355
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C +G +++A ++ M S+G D VT+ +I+GL ++ KV++ K+L +M GC PN+
Sbjct: 356 CREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNT 415
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
SY +L GL EA+E++ + P+ ++Y L+HG + + ++++
Sbjct: 416 VSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVRE 475
Query: 364 MVQQGFVP 371
M+++GF P
Sbjct: 476 MIKKGFFP 483
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 134/283 (47%), Gaps = 14/283 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG--RISK 146
P+ YT +IN L Q ++ D + +++++ + G N + + G +
Sbjct: 378 PDVVTYTSVINGLCQERKVDQAKKMLRQM-------YKHGCKPNTVSYTALLNGLCKNGN 430
Query: 147 AIET--LFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
++E + +M + W P+ T++++++ E + K G +N+
Sbjct: 431 SLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINL 490
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L++ LC+ ++ A +++ C NV ++T++HG C+K ++E A LL+ M
Sbjct: 491 LIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSN 550
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D VT+ +I L K+G++EE KL +M G P +Y+ V++ R +
Sbjct: 551 KHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLL 610
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+L+ +M+ + + +Y ++I LC+ +E +L K+++
Sbjct: 611 KLLEKMLSRQECRT--AYNQVIEKLCSFGNLEQAYKLLGKVLR 651
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
+L +L KL + + AK +E ++ G L A VL K
Sbjct: 140 MLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAG 199
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
EP++ +T +H L +++A LERM+ I+ + +T+N LI G ++E+ M
Sbjct: 200 IEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAM 259
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE-RMSPSFVSYKKLIHG 347
+L+ M KGC P+ SY V+ L +KR E + L+ +M+ + + P V+Y +H
Sbjct: 260 ELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHM 319
Query: 348 L 348
L
Sbjct: 320 L 320
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A VL K+ E + +M G + A +L M+ GI+ D N
Sbjct: 151 QGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTA 210
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I L ++++ ++ LERM+ PN +Y ++ G D R +A EL+ M +
Sbjct: 211 IHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGC 270
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
SP +SY ++ LC +K +++V +++KM++
Sbjct: 271 SPDKISYYTVMGFLCKEKRIKEVRLLMEKMLK 302
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 107/261 (40%), Gaps = 17/261 (6%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + P L+I L Q ++ D + M++ ++G NV+ + G
Sbjct: 478 KKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQC-------LNNGCAVNVVNFTTVIHGF 530
Query: 144 ISK-----AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
K A+ L DM N P V T+ +++ L E + ++G+
Sbjct: 531 CQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTP 590
Query: 199 CCLNILLKGLCENGNLEAAFYVLDE-FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
++ C G +E +L++ +Q C Y+ ++ LC GN+E+A+ LL
Sbjct: 591 VTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT---AYNQVIEKLCSFGNLEQAYKLLG 647
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
++ D T ++LI +G + RM + P+ ++V L+ +
Sbjct: 648 KVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEG 707
Query: 318 RFPEAKELVGRMICE-RMSPS 337
+ EA +L+ R + R+SP
Sbjct: 708 KSEEADKLILRFVERGRISPQ 728
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 2/154 (1%)
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
FY D + +P V Y ++ L + + A +L M I+ F ++
Sbjct: 121 FYWADRQWRYRHDPIV--YYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVS 178
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
+ GK+ M++L M+ G P+ + ++ L+ R +A + RM + P+
Sbjct: 179 YSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPN 238
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++Y LI G C+ +ED ++ +M +G P
Sbjct: 239 VITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSP 272
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 3/285 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
++ N+ + ++I+ LA R +E+ ++ + +L + + F YN + G + K
Sbjct: 270 FSLNDVTFNVVISFLA---REGHLENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRK 326
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A +M + P+V T+N +++ L+ + Q + +G+ D N LL
Sbjct: 327 AEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLN 386
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
C+ GNL+ A ++L + + P V TY+TL+ G C G++ EA L E M +G
Sbjct: 387 RYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFP 446
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T+ IL++G RK + + + M KG P+ +Y + L P A +L
Sbjct: 447 DVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLR 506
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + + P V+Y +I GLC ++D + KMV G P
Sbjct: 507 EVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQP 551
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 137/328 (41%), Gaps = 35/328 (10%)
Query: 68 LRDPISVISVLNQYSK---------------RKDYNPNEALYTLIIN------KLAQAKR 106
L D I+ S+LN+Y K R P Y +I+ LA+A+R
Sbjct: 375 LPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARR 434
Query: 107 FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF 166
++ VE+ C F D Y ++ ++ A E +M S P +
Sbjct: 435 -------LKEEMVEQGC-FPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAY 486
Query: 167 NLVLN---LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE 223
N + L S + +++ + G+ D N+++ GLC+ GNL+ A + +
Sbjct: 487 NTRICAELTLSSTPMAFQLREVMMLK---GIYPDTVTYNVIIDGLCKTGNLKDAKRLKTK 543
Query: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283
+P+ TY+ L+H CE+G + EA LL M S+G+ VT+ IL+ ++G
Sbjct: 544 MVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGN 603
Query: 284 VEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKK 343
+ +M G PN +Y +++ L R P A M+ ++P+ +Y
Sbjct: 604 LYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTL 663
Query: 344 LIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
LI G C + D + +M Q G P
Sbjct: 664 LIDGNCREGNWADAIRLYFEMHQNGIPP 691
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 91/201 (45%)
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
+P T+N++++ L + + + T G++ D L+ CE G L A
Sbjct: 515 YPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARK 574
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+L+ +P+V TY+ L+H C +GN+ A+G +M GI+ + +T+N+LI L
Sbjct: 575 LLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALC 634
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
G+ + M +G PN +Y ++ G + + +A L M + P +
Sbjct: 635 MTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYC 694
Query: 340 SYKKLIHGLCNQKLVEDVDWV 360
++ L G + ++++
Sbjct: 695 THNALFKGFDEGHMYHAIEYM 715
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 3/222 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V+ N VL +L A + +++ +Y +L VE N LL + G + A +
Sbjct: 200 PDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASML 259
Query: 221 LDEFPKQNC--EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
L E Q N T++ ++ L +G++E A L++ M A + T+N LI+ L
Sbjct: 260 LKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-KASSFTYNPLITAL 318
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
++G V + L M+ +G P +Y +++GLL ++ A+ M + P
Sbjct: 319 LERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDV 378
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++Y L++ C +++ W+L + + G P + + ++
Sbjct: 379 ITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLI 420
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 2/278 (0%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
+Y II+ + + K + D + +++C YN + + G++ AI L
Sbjct: 210 VMYNTIIDGVCKDKLVNDAFDFYSEMVAKRIC--PTVVTYNTLICGLCIMGQLKDAIGLL 267
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
M N P+V TF+++++ E + ++ K V+ + N L+ G C
Sbjct: 268 HKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLV 327
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
+ A + + + P+V +YS ++ G C+ V+EA L E M + I D VT+
Sbjct: 328 NEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTY 387
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N LI GL K G++ +KL+ M +G PN +Y +L L +A EL+ ++
Sbjct: 388 NSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKD 447
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ PS +Y LI+GLC ++D V + ++ G+
Sbjct: 448 HNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGY 485
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 6/296 (2%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR-IS 145
+ N+ Y +IN L + + A ++++RI KL R D YN I I G + ++
Sbjct: 170 FQLNQVSYRTLINGLCKVGQTKAALEMLRRID-GKLVRL-DVVMYNTI-IDGVCKDKLVN 226
Query: 146 KAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + +M + P+V T+N L+ L + +L I G+ + +IL
Sbjct: 227 DAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAI-GLLHKMILENINPTVYTFSIL 285
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ C+ G ++ A V K++ +PN+ TY++LM+G C V +A + M G+
Sbjct: 286 VDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGV 345
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +++I+ISG K V+E MKL E M K +P+ +Y ++ GL R A +
Sbjct: 346 APDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALK 405
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+G M P+ ++Y L+ LC V+ +L K+ P + + ++
Sbjct: 406 LIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILI 461
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
N PS+ F +L LV A Y + ++ G+ + L+IL+ + G+ +
Sbjct: 64 NPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLS 123
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
F V K+ EP+ T +TL+ GLC KG++ +A +++ + G + V++ LI+G
Sbjct: 124 FSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLING 183
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L K G+ + +++L R+ GK + Y ++ G+ K +A + M+ +R+ P+
Sbjct: 184 LCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPT 243
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+Y LI GLC ++D +L KM+ + P + + +V
Sbjct: 244 VVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILV 286
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 107/220 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A M + P++ T+N ++N + + I+ + A++GV D
Sbjct: 293 GKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSY 352
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+I++ G C+ ++ A + +E + P+V TY++L+ GLC+ G + A L+ M
Sbjct: 353 SIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHD 412
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + +T+N L+ L K V++ ++LL ++K P+ +Y ++ GL R +
Sbjct: 413 RGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKD 472
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
A+++ ++ + +Y +I G C + V W +
Sbjct: 473 AQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVIPQFWTV 512
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
++++ K G E DA L L+KGLC G++ A + D+ + N +Y TL++GLC
Sbjct: 126 VFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLC 185
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ G + A +L R++ + + D V +N +I G+ K V + M K P
Sbjct: 186 KVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVV 245
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ GL + +A L+ +MI E ++P+ ++ L+ C + V++ V M
Sbjct: 246 TYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVM 305
Query: 365 VQQGFVPRMGMWREIV 380
+++ P + + ++
Sbjct: 306 MKKDVKPNIVTYNSLM 321
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 92/189 (48%)
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
LG +++ L+ GLC+ G +AA +L + +V Y+T++ G+C+ V +
Sbjct: 168 LGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVND 227
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
AF M ++ I VT+N LI GL G++++ + LL +M + P ++ ++
Sbjct: 228 AFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVD 287
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + EAK + M+ + + P+ V+Y L++G C V + + M Q G P
Sbjct: 288 AFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAP 347
Query: 372 RMGMWREIV 380
+ + ++
Sbjct: 348 DVHSYSIMI 356
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
Query: 140 MAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
+ ++KA E++F+ M P V +++++++ K+ E ++ + D
Sbjct: 326 LVNEVNKA-ESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDV 384
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N L+ GLC++G + A ++ E + PN+ TY++L+ LC+ +V++A LL +
Sbjct: 385 VTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTK 444
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
++ I T+NILI+GL K G++++ K+ E + G + +Y ++ G K
Sbjct: 445 LKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKK 502
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 2/165 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+++I+ + K D + + + +++ F D YN + +GRIS A+
Sbjct: 347 PDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQI--FPDVVTYNSLIDGLCKSGRISYAL 404
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + +M P++ T+N +L+ L + + T ++ C NIL+ GL
Sbjct: 405 KLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGL 464
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
C++G L+ A V ++ +V TY+T++ G C+KG V F
Sbjct: 465 CKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVIPQF 509
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 18/291 (6%)
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL-------FDMPSYNCWPSVKTFNLV 169
++V +C GF + + I G I AI+ FD+P C NL
Sbjct: 163 MRVTPMC----GFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCG------NL- 211
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
L+ ++ G I G Y G ++ NIL+ C+ GN+ A V DE K++
Sbjct: 212 LDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSL 271
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+P V +++TL++G C+ GN++E F L +ME D T++ LI+ L K+ K++
Sbjct: 272 QPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHG 331
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
L + M +G PN + +++G KE +M+ + + P V Y L++G C
Sbjct: 332 LFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC 391
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVD 400
+ ++ M+++G P + ++ G D + + + +D
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 3/195 (1%)
Query: 180 GEIQGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
GEI + S K+ G++ D N L+ G C+NG+L AA ++D ++ P+ TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+TL+ G C G+VE A + + M+ GI+ D V F+ L+ G+ K+G+V + + L M
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
G P+ +Y ++ K +L+ M + PS V+Y L++GLC +++
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Query: 357 VDWVLKKMVQQGFVP 371
D +L M+ G VP
Sbjct: 539 ADMLLDAMLNIGVVP 553
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 1/227 (0%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
+V FN+++N + Q ++ K ++ N L+ G C+ GNL+ F +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
+ K P+V TYS L++ LC++ ++ A GL + M G+ + V F LI G +
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G+++ + ++M KG P+ Y ++ G A+ +V MI + P ++Y
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGF-VPRMGMWREIVGCVTFGK 387
LI G C VE + K+M Q G + R+G + G G+
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 131/305 (42%), Gaps = 6/305 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ +IN L + + D + + L +D F +I + G I
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIP-NDVIFTTLIHGHSR-NGEIDLMK 365
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E+ M S P + +N ++N + I + G+ D L+ G
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G++E A + E + E + +S L+ G+C++G V +A L M GI D
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ +++ K+G + G KLL+ M+ G P+ +Y +L GL + A L+
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT-FGK 387
M+ + P ++Y L+ G + + ++K + G V + ++ IV + K
Sbjct: 546 MLNIGVVPDDITYNTLLEG--HHRHANSSKRYIQK-PEIGIVADLASYKSIVNELDRASK 602
Query: 388 DNRNR 392
D+RNR
Sbjct: 603 DHRNR 607
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 101/231 (43%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + + M P V T++ ++N L G++ K G+ +
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G NG ++ + + +P++ Y+TL++G C+ G++ A +++ M
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ D +T+ LI G + G VE +++ + M G + + ++ G+ + R
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A+ + M+ + P V+Y ++ C + + +LK+M G VP
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Glycine max]
Length = 572
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 114/236 (48%)
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
KA+ + M P ++ ++N L G + G + N L+
Sbjct: 117 KAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLV 176
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
KGLC +GNL + +LD K+ PN TYS L+ ++ V+EA LL+ + ++G +
Sbjct: 177 KGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGE 236
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ V++N+L++GL K+G+ EE +KL + + KG P+ S+ +L L + R+ EA EL
Sbjct: 237 PNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANEL 296
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ M E PS V+Y LI L E VL +M + GF + I+
Sbjct: 297 LAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIA 352
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 92/168 (54%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL LC+ A V++ P+ +Y+ L++ LC++GNV A L+E+ME G
Sbjct: 105 LLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHG 164
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+TVT+N L+ GL G + + ++LL+R+ KG PN+ +Y +L ++ EA
Sbjct: 165 FPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAM 224
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L+ +I + P+ VSY L+ GLC + E+ + +++ +GF P
Sbjct: 225 KLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSP 272
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 102/193 (52%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+ DA L+ LC+ GN+ A ++++ N TY+TL+ GLC GN+ ++
Sbjct: 129 GIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQS 188
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LL+R+ +G+ + T++ L+ K+ V+E MKLL+ + KG PN SY +L G
Sbjct: 189 LQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTG 248
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L + R EA +L + + SPS VS+ L+ LC + E+ + +L +M ++ P
Sbjct: 249 LCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPS 308
Query: 373 MGMWREIVGCVTF 385
+ + ++ ++
Sbjct: 309 VVTYNILITSLSL 321
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 3/295 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ A YT ++N L KR + I K+E ++ YN + M G +++++
Sbjct: 132 PDAASYTHLVNFLC--KRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSL 189
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L + P+ T++ +L + E + G E + N+LL GL
Sbjct: 190 QLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGL 249
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G E A + E P + P+V +++ L+ LC +G EEA LL M+ E
Sbjct: 250 CKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSV 309
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+NILI+ L G+ E+ K+L+ M G ++ SY ++ L + + + + +
Sbjct: 310 VTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQ 369
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
MI R P+ +Y I L Q V++ ++++ + + P ++ ++ +
Sbjct: 370 MIHRRCHPNEGTYSA-ISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASL 423
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 145/342 (42%), Gaps = 49/342 (14%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-YNVIKIYGNMAGRISKA 147
PN Y +++ L + R + + Q + V+ FS +N++ GR +A
Sbjct: 237 PNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKG---FSPSVVSFNILLRSLCYEGRWEEA 293
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT---SAAKLGVEIDACCLNIL 204
E L +M + PSV T+N+ L+ S L G + + + G + A N +
Sbjct: 294 NELLAEMDKEDQPPSVVTYNI---LITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPI 350
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL------------------------- 239
+ LC+ G ++ LD+ + C PN TYS +
Sbjct: 351 IARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSAISMLSEQGKVQEAFFIIQSLGSKQNF 410
Query: 240 -MH--------GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
MH LC KGN AF +L M G D+ T++ LI G+ ++G ++E +K+
Sbjct: 411 PMHDFYKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKI 470
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
++ P+ +Y ++ G +R + E+ M+ + P+ +Y L+ GL
Sbjct: 471 FRILEENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGLAF 530
Query: 351 QK---LVEDV--DWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
++ + D+ + LKK++ Q V R+ M +I + G+
Sbjct: 531 EEETDIAADLMKELYLKKVLSQSTVERLCMQYDIKELIATGQ 572
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 9/233 (3%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDA---IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
++D P+ Y ++I L+ R + + D M R + + YN I
Sbjct: 302 KEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFK-----ASATSYNPIIARLCK 356
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ ++ L M C P+ T++ + L K+ I + +K +
Sbjct: 357 EGKVDLVLKCLDQMIHRRCHPNEGTYSAISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFY 416
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ LC GN AF +L E K P+ TYS+L+ G+C +G ++EA + +E
Sbjct: 417 KN-LIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILE 475
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
D +N LI G K + + +++ M KGC PN +Y ++ GL
Sbjct: 476 ENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGL 528
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 80/157 (50%)
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
AF L+ + +P V + L++ LC+ +A ++E M GI D ++ L++
Sbjct: 83 AFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVN 142
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
L K+G V ++L+E+M+G G N+ +Y ++ GL ++ +L+ R+ + + P
Sbjct: 143 FLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIP 202
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ +Y L+ ++ V++ +L ++ +G P +
Sbjct: 203 NAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNL 239
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 110/218 (50%), Gaps = 1/218 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ +A+E +M V T+N +++ L A L+ E+ G DA
Sbjct: 195 GRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTF 254
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
IL+ GLC+ G + A +L+ + EP++ TY+TLM+GLC G +E+A L E +
Sbjct: 255 TILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLAD 314
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
GI + ++NILI+G K K++E +L E M+ KG P++ +Y ++ L R
Sbjct: 315 RGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRT 374
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLC-NQKLVEDVD 358
A++L M +Y L+ GLC N L E +D
Sbjct: 375 AQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAID 412
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 30/266 (11%)
Query: 85 KDYNPNEALYTLIINKLA-------QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
K P+ Y ++N L K F+++ D ++ V F YN++
Sbjct: 280 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV---------FSYNILING 330
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
+I +A +M PS T+N ++ L + G +A KL VE+
Sbjct: 331 YCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQS-------GRVRTAQKLFVEMQ 383
Query: 198 AC-------CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
C +LL GLC+NG+LE A + K +PN+ +S L+ G+C G +E
Sbjct: 384 TCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLE 443
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA+ + + G++ DT+ +NILI+GL +G + E +KLL +M+ KGC P+S ++ ++
Sbjct: 444 EAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVII 503
Query: 311 YGLLDKKRFPEAKELVGRMICERMSP 336
LL + EA +L+ M SP
Sbjct: 504 QNLLKENEIHEAIQLLEEMRNRNFSP 529
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 150/346 (43%), Gaps = 20/346 (5%)
Query: 43 SDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLA 102
S+ + K+ K LSP F +LR V + KR + P+ T ++ +
Sbjct: 36 SNSKSEKIGTKASLSP------FESLRAVGCGFGVFGGFLKR-GFEPDAVTVTTLVKGVW 88
Query: 103 QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET-----LFDMPSY 157
+ I D +Q ++ + K YG + + KA +T L +
Sbjct: 89 ME---NGIPDAVQLFD-----EMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKG 140
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
NC V T+ ++++ L + E +++ G+ D + L+ GLC G L+ A
Sbjct: 141 NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEA 200
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
E + +V TY++L+HGL G +E L M G D TF ILI G
Sbjct: 201 LEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDG 260
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L K+GKV E ++LE M KG P+ +Y ++ GL + +A +L + + +
Sbjct: 261 LCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 320
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
SY LI+G C + +++ + ++M +G P + ++G +
Sbjct: 321 VFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGAL 366
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 122/245 (49%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F + ++ G++ +A + L M P + T+N ++N L + ++
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 309
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
S A G++++ NIL+ G C++ ++ AF + +E + +P+ TY+TL+ LC+
Sbjct: 310 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQS 369
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G V A L M++ G T+ +L+ GL K G +EE + L + +K PN +
Sbjct: 370 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVF 429
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+L G+ + EA + + + P ++Y LI+GLCN+ ++ + +L +M +
Sbjct: 430 SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 489
Query: 367 QGFVP 371
+G +P
Sbjct: 490 KGCLP 494
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 3/256 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++IN L +A++ + +++K C+ D F Y +I G ++A++ +
Sbjct: 115 YGILINGLCKARKTGLAIKLHEKMKGN--CK-GDVFTYGMIIDSLCKDGMTTEALDMFSE 171
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P V ++ +++ L E + G+ D N L+ GL G
Sbjct: 172 MIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGL 231
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ + L+ + P+ T++ L+ GLC++G V EA +LE M +G + D +T+N
Sbjct: 232 WKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNT 291
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L++GL G++E+ KL E + +G N SY ++ G ++ EA L M +
Sbjct: 292 LMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKG 351
Query: 334 MSPSFVSYKKLIHGLC 349
+ PS V+Y LI LC
Sbjct: 352 LKPSTVTYNTLIGALC 367
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 6/285 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK-VEKLCRFSDGFFYNVIKIYG-NMAGRISK 146
P+ +Y+ +++ L RF +++ ++ K +E +D + YN + I+G + AG +
Sbjct: 179 PDVVVYSSLMDGLC---RFGRLKEALEFFKEMEGRGISADVYTYNSL-IHGLSRAGLWKE 234
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
L M P TF ++++ L GE Q I G E D N L+
Sbjct: 235 VTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMN 294
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC G LE A + + + + NV +Y+ L++G C+ ++EAF L E M +G+
Sbjct: 295 GLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKP 354
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
TVT+N LI L + G+V KL M+ G + ++Y +L GL EA +L
Sbjct: 355 STVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLF 414
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P+ + L+ G+C +E+ ++ + G P
Sbjct: 415 QSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEP 459
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 2/211 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y ++IN + ++ D + + ++ + L + YN + +GR+ A + +
Sbjct: 324 YNILINGYCKDQKIDEAFRLFEEMRPKGLKPST--VTYNTLIGALCQSGRVRTAQKLFVE 381
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + + + T+ ++L+ L E ++ S K + + +ILL G+C G
Sbjct: 382 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 441
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
LE A+ DE K EP+ Y+ L++GLC KG + EA LL +ME +G D++TFN+
Sbjct: 442 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 501
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+I L K+ ++ E ++LLE M+ + P+ A
Sbjct: 502 IIQNLLKENEIHEAIQLLEEMRNRNFSPDEA 532
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKR-------FDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+ K P+ Y +I L Q+ R F ++ Q +K+ C DG N
Sbjct: 348 RPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKN--- 404
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
G + +AI+ + P+++ F+++L+ + A E + +K G+E
Sbjct: 405 ------GHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 458
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D NIL+ GLC G L A +L + ++ C P+ T++ ++ L ++ + EA L
Sbjct: 459 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 518
Query: 256 LERMESEGIDADTVTFNILI 275
LE M + D ++L+
Sbjct: 519 LEEMRNRNFSPDEAVTSMLL 538
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 12/297 (4%)
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK--IY 137
Q K + P Y +++ + ++ + E I+ + F G V+ I
Sbjct: 254 QKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEM-------FDSGLMPCVVTCTIV 306
Query: 138 GNM---AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
N GR+S A+ M C P+V T+N ++ +A + + + GV
Sbjct: 307 VNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGV 366
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E D N+L++G C +G++ +AF +L + TY+ L+ LC+ G V+EA
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACS 426
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L + +E GI ++VTFN +I+GL K GK + LE M G P++ +Y + L
Sbjct: 427 LFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLC 486
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K E + M+ + + PS V+Y +I+ L N++ + +MV QG P
Sbjct: 487 KTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSP 543
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 146/305 (47%), Gaps = 19/305 (6%)
Query: 95 TLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDM 154
T+++N + R + + ++ K C + + +++ + N AG++ KA+ L M
Sbjct: 304 TIVVNAYCREGRMSGAVRVFESMRF-KGCEPNVWTYNAIVQGFCN-AGKVYKAMALLDQM 361
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGE-IQGIYTSAAKL-------GVEIDACCLNILLK 206
P V T+NL++ G+ I G SA +L G+ D N+L+
Sbjct: 362 RECGVEPDVVTYNLLIR--------GQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLID 413
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC+ G ++ A + D + PN T++T+++GLC+ G + A LE M S G
Sbjct: 414 ALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAP 473
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
DT T++ I L K +EG+ ++ M K P++ +Y V+ L +++ + A +
Sbjct: 474 DTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIW 533
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ-QGFVPRMGMWREIVGCVTF 385
G+M+ + SP V+Y + CN+ +++ + V+ +M + + V M I G +
Sbjct: 534 GQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSI 593
Query: 386 GKDNR 390
G+ +R
Sbjct: 594 GQTDR 598
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGR + + L M P+ + + +++L + E + I G+
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
I++ C G + A V + + CEPNV TY+ ++ G C G V +A LL++M
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G++ D VT+N+LI G G + +LL M+G G + +Y ++ L +
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA L + + P+ V++ +I+GLC + L+ M+ G+ P
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAP 473
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 8/234 (3%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ T+N ++ L Q + + G DA N L+ G C LE A +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ P + + +Y+ L+ G CE G ++EA L M D T L+ GL
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAALVKGLCD 242
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+ EEG+ +L++MK G P + +Y ++ +++ EA++++ M + P V+
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVY 394
+++ C + + V + M +G P + + IV G N +VY
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQ----GFCNAGKVY 352
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+KGLC+ G E +L + + P R Y+ L+ C + EEA +L M G
Sbjct: 236 LVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSG 295
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT I+++ ++G++ +++ E M+ KGC PN +Y ++ G + + +A
Sbjct: 296 LMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAM 355
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLC 349
L+ +M + P V+Y LI G C
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQC 381
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 114/290 (39%), Gaps = 8/290 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K PN Y I+ A + A+ D M+ VE D YN++ +
Sbjct: 329 KGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEP-----DVVTYNLLIRGQCID 383
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G I A L M T+N++++ L E ++ G+ ++
Sbjct: 384 GHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTF 443
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ GLC+ G + A L+ P+ TYS + LC+ +E ++ M
Sbjct: 444 NTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQ 503
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + TV + I+I+ L + ++ +M +GC P+ +Y + ++ R E
Sbjct: 504 KDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDE 563
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A+ +V M R ++Y LI G + + +LK M +P
Sbjct: 564 AENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMP 613
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 114/288 (39%), Gaps = 6/288 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R + P+ + +I + ++ + D+ ++ + D Y + AGR
Sbjct: 157 RSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQ--DAVSYAALIEGFCEAGR 214
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I +A+E +M P + T ++ L A E + +LG
Sbjct: 215 IDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAA 270
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C E A +L+E P V T + +++ C +G + A + E M +G
Sbjct: 271 LVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKG 330
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + T+N ++ G GKV + M LL++M+ G P+ +Y ++ G A
Sbjct: 331 CEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAF 390
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ M ++ +Y LI LC V++ + + +G P
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRP 438
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 126/355 (35%), Gaps = 89/355 (25%)
Query: 126 SDGFFYNVIKIYGNMAGRISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQG 184
+D + YNV+ G++ +A +LFD Y P+ TFN V+N L A +
Sbjct: 403 ADQYTYNVLIDALCKTGKVDEAC-SLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACT 461
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK------------------ 226
+ G D + ++ LC+ + + +DE +
Sbjct: 462 FLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLF 521
Query: 227 -----------------QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
Q C P+V TY+T + C +G ++EA ++ M+ D +
Sbjct: 522 NERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAM 581
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPN--------------------------- 302
+N LI G G+ + + +L+ M G PN
Sbjct: 582 AYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSV 641
Query: 303 ------------------------SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
+ +Y +L G +++R E LV M E + +
Sbjct: 642 WKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNE 701
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNR 392
Y L++ C ++ D +L M+ GF+P + ++ ++ G G+ +R +
Sbjct: 702 DIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAK 756
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 25/263 (9%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR-FSDGFFYNVIKIYGNMAGRISK 146
+P+ YT + R D E+++ +K CR D YN + G+ +
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLDEAENVVTEMKK---CRTIVDAMAYNTLIDGHTSIGQTDR 598
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ L M P+ TF ++L L+ +L + TS K +E+
Sbjct: 599 AVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWK-TIEL---------- 647
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPN-VRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
A + L E K+N P+ RTY +++ G E+ ++E L+ M+ E +
Sbjct: 648 ---------ADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLP 698
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ +N L++ K + LL M G G PN YQ +L GL + + AKE+
Sbjct: 699 LNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEI 758
Query: 326 VGRMICERMSPSFVSYKKLIHGL 348
+ + + +K +I G
Sbjct: 759 FRSSRWKEYNTDEIVWKVIIDGF 781
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN +Y II+ L + ++ D D++ + EK+ D YN + +G+
Sbjct: 174 YEPNVVIYNTIIDSLCENRQVDTALDVLNHM--EKMGIRPDVITYNSLITRLFHSGKWGV 231
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
+ L DM P V TF+ ++++ E + Y + V+ + N L+
Sbjct: 232 SARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLIN 291
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC +G L+ A VL+ + PN TY+TL++G C+ V++A +L M +G+D
Sbjct: 292 GLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDG 351
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
DT T+N L G + G+ K+L RM G P+ ++ +L GL + + +A +
Sbjct: 352 DTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKL 411
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ ++Y +I G+C VED ++ + +G P
Sbjct: 412 EDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSP 456
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 130/280 (46%), Gaps = 2/280 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ ++ ++ +A+ K+++A+ + + I++ + D + ++ + R+S A+
Sbjct: 71 PSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISH--DLYSFSTLIDCFCRCSRLSLAL 128
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M PS+ TF ++N E + LG E + N ++ L
Sbjct: 129 SCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSL 188
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
CEN ++ A VL+ K P+V TY++L+ L G + +L M GI D
Sbjct: 189 CENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDV 248
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+TF+ +I K+G++ E K + M + PN +Y ++ GL EAK+++
Sbjct: 249 ITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNF 308
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
M+ + P+ V+Y L++G C K V+D +L M G
Sbjct: 309 MVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDG 348
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
KLG E L+ G C ++ A ++D+ EPNV Y+T++ LCE V+
Sbjct: 136 KLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVD 195
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A +L ME GI D +T+N LI+ L GK ++L M G +P+ ++ ++
Sbjct: 196 TALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMI 255
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ + EAK+ MI + P+ V+Y LI+GLC L+++ VL MV +GF
Sbjct: 256 DVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFF 315
Query: 371 PRMGMWREIV 380
P + +V
Sbjct: 316 PNAVTYNTLV 325
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A + L M S +P+ T+N ++N +K + I + GV+ D
Sbjct: 297 GLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTY 356
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L +G C+ G AA VL P++ T++ L+ GLCE G +E+A LE ++
Sbjct: 357 NTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQK 416
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+T+NI+I G+ K KVE+ L + KG P+ +Y ++ GL K+ + E
Sbjct: 417 SETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLE 476
Query: 322 AKELVGRM 329
A EL +M
Sbjct: 477 AHELYRKM 484
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 1/216 (0%)
Query: 166 FNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP 225
FN +L LV + + E ++ + K V+ D I++KG CENGNL+ +F +L
Sbjct: 131 FNSLLGSLVRSNCF-EKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQ 189
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
PNV Y+TL+ G C+ G++E A ++M G+ A+ TF +LI+GL K+G +
Sbjct: 190 DMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKK 249
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
+G L E+MK G +PN +Y ++ + + A +L M + + V+Y LI
Sbjct: 250 DGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLI 309
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
G+C ++ V + + ++ +M + P + + ++G
Sbjct: 310 GGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIG 345
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 135/294 (45%), Gaps = 2/294 (0%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N+ +T++IN L + D+ +++K+ L F + + YN + G+I +A +
Sbjct: 231 NQYTFTVLINGLFKKGLKKDGFDLFEKMKINGL--FPNLYTYNCLMNEYCGEGKICRAFD 288
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+M +V T+N ++ + + E + + K V + N L+ G C
Sbjct: 289 LFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFC 348
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ GNL+ A +LD+ P++ TY+ L+ G + GN + L ME GI V
Sbjct: 349 DVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKV 408
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T +LI + ++E+ ++ M+ G P+ Y +++GL K E+ +L M
Sbjct: 409 TCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSM 468
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ PS V Y +IHG C + +L++M +G VP + + I+G +
Sbjct: 469 GEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVL 522
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 94/186 (50%)
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ ++G+ + +L+ GL + G + F + ++ PN+ TY+ LM+ C
Sbjct: 220 FDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCG 279
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+G + AF L + M G++A+ VT+N LI G+ ++ +V E KL+++MK PN +
Sbjct: 280 EGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLIT 339
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ G D +A L+ ++ +SPS V+Y LI G + V + ++M
Sbjct: 340 YNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREME 399
Query: 366 QQGFVP 371
+G P
Sbjct: 400 GRGISP 405
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 161/341 (47%), Gaps = 28/341 (8%)
Query: 44 DHHAYKLNHKDWLSPTEVLKIFSN-LRDPI-SVISVLNQYSKRKDYNPNEAL-YTLIINK 100
DHH KL H L +L+I SN + P +V S+L+ ++ ++ + AL Y IIN
Sbjct: 49 DHH--KLPHAQSL----ILQILSNKISSPFFTVPSLLHHLTQNQNPSMTTALLYESIINA 102
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKAIETLFDMPSYNC 159
+++ D + V+K F F +++ G++ + F+
Sbjct: 103 HLKSQLLDKALIFFNEM-VDKGLVFRPNIFNSLL---GSLVRSNCFEKAWLFFNELKERV 158
Query: 160 WPSVKTFNLVL-------NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
V +F +++ NL S +L G +Q +G+ + L+ G C+NG
Sbjct: 159 KFDVYSFGIMIKGCCENGNLDKSFQLLGLLQ-------DMGLSPNVVIYTTLIDGCCKNG 211
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
++E A D+ + N T++ L++GL +KG ++ F L E+M+ G+ + T+N
Sbjct: 212 DIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYN 271
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
L++ +GK+ L + M+ +G N +Y ++ G+ ++R EA++LV +M
Sbjct: 272 CLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKA 331
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+SP+ ++Y LI G C+ ++ +L ++ G P +
Sbjct: 332 AVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSL 372
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + KA L + S PS+ T+N+++ A + + + G+
Sbjct: 350 VGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVT 409
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+L+ +E AF + K P+V Y L+HGLC KGN++E+ L M
Sbjct: 410 CTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMG 469
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++ V +N +I G K+ ++LL M+ KG PN ASY ++ L ++
Sbjct: 470 EMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWE 529
Query: 321 EAKELVGRMICERMSPS 337
EA+ L+ +MI ++ PS
Sbjct: 530 EAEVLLDKMIELQLKPS 546
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 134/286 (46%), Gaps = 4/286 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMA 141
K P Y ++N L A D+ E + + ++ ++ D YN +IK Y A
Sbjct: 196 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRI--KPDIVTYNTMIKGYCK-A 252
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+ KA+E L DM + T+ ++ + +G +Y + G+++
Sbjct: 253 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 312
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++++ GLC+ G L + V + ++ +PNV Y+ L+ G + G+VE+A LL RM
Sbjct: 313 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 372
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EG D VT++++++GL K G+VEE + + G NS Y ++ GL R E
Sbjct: 373 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 432
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
A+ L M + + Y LI + V++ + K+M ++
Sbjct: 433 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE 478
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 136/321 (42%), Gaps = 37/321 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+K Y N Y +++ LA AK D I + IK + + +IK +G + G
Sbjct: 126 KQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEF-PMTVSAANALIKSFGKL-G 183
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ + + M P++ T+N ++N LVSA + ++ ++ D N
Sbjct: 184 MVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYN 243
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH--------------------- 241
++KG C+ G + A L + + E + TY T++
Sbjct: 244 TMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEK 303
Query: 242 --------------GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
GLC++G + E + + E M +G + + +LI G K G VE+
Sbjct: 304 GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDA 363
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
++LL RM +G P+ +Y V+ GL R EA + + ++ + + Y LI G
Sbjct: 364 IRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDG 423
Query: 348 LCNQKLVEDVDWVLKKMVQQG 368
L V++ + + ++M ++G
Sbjct: 424 LGKAGRVDEAERLFEEMSEKG 444
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 114/268 (42%), Gaps = 43/268 (16%)
Query: 156 SYNCWPSVK---TFNL-----VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
S+ CW + T NL ++++L AK I+ + + K + N L+K
Sbjct: 119 SFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKS 178
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ G +E +V + + EP + TY+ LM+GL V+ A + E MES I D
Sbjct: 179 FGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPD 238
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKG--------------CYPNS------ASYQ 307
VT+N +I G K G+ ++ M+ L M+ +G CY +S A YQ
Sbjct: 239 IVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQ 298
Query: 308 E---------------VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
E V+ GL + + E + MI + P+ Y LI G
Sbjct: 299 EMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSG 358
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
VED +L +M+ +GF P + + +V
Sbjct: 359 SVEDAIRLLHRMIDEGFKPDVVTYSVVV 386
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 16/216 (7%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N Y+ +I+ L +A R D E + + + EK C D + YN + ++ +AI
Sbjct: 413 NSMFYSSLIDGLGKAGRVDEAERLFEEMS-EKGCT-RDSYCYNALIDAFTKHRKVDEAIA 470
Query: 150 TLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M C +V T+ ++L+ + E ++ G+ A C L GL
Sbjct: 471 LFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGL 530
Query: 209 CENGNLEAAFYVLDEFPKQN------CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
C +G + A +LDE CE + T LC+ G ++EA L + +
Sbjct: 531 CLSGKVARACKILDELAPMGVILDAACEDMINT-------LCKAGRIKEACKLADGITER 583
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
G + ++I+ LRK GK + MKL+ G G
Sbjct: 584 GREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIG 619
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 113/248 (45%), Gaps = 12/248 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK PN A+YT++I+ A++ + ++ R+ E D Y+V+ GR
Sbjct: 337 RKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF--KPDVVTYSVVVNGLCKNGR 394
Query: 144 ISKAIETL----FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ +A++ FD + N ++ +++ L A E + ++ ++ G D+
Sbjct: 395 VEEALDYFHTCRFDGLAINSM----FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 450
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
C N L+ ++ ++ A + ++ C+ V TY+ L+ G+ ++ EEA L +
Sbjct: 451 CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDM 510
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M +GI F L +GL GKV K+L+ + G ++A ++++ L R
Sbjct: 511 MIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGR 569
Query: 319 FPEAKELV 326
EA +L
Sbjct: 570 IKEACKLA 577
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 139/338 (41%), Gaps = 53/338 (15%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-- 142
+++ P+ YT +I+ L +A F+ D + R++ + NV+ + G
Sbjct: 255 ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMR-------ATSCLPNVVTYSTLLCGCL 307
Query: 143 ---RISKAIETLFDMPSYNCWPSVKTFN-------------------------------L 168
++ + L M C+PS K FN +
Sbjct: 308 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 367
Query: 169 VLNLLVSA----------KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
V N+L+ + L + Y+ GV ++ ++ + LC G E AF
Sbjct: 368 VYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 427
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
V+ E Q P+ TYS +++ LC +E AF L E M+ G+ AD T+ I++
Sbjct: 428 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 487
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G +E+ K M+ GC PN +Y +++ L K+ A EL M+ E P+
Sbjct: 488 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 547
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
V+Y LI G C VE + ++M VP + M+
Sbjct: 548 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 585
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 143/308 (46%), Gaps = 18/308 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + Y+ ++N L A + + + + +K L +D + Y ++ AG I +A
Sbjct: 440 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL--VADVYTYTIMVDSFCKAGLIEQAR 497
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +M C P+V T+ +++ + AK ++ + G + + L+ G
Sbjct: 498 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 557
Query: 209 CENGNLEAAFYV------------LDEFPKQ---NCE-PNVRTYSTLMHGLCEKGNVEEA 252
C+ G +E A + +D + KQ N E PNV TY L+ G C+ VEEA
Sbjct: 558 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 617
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LL+ M EG + + + ++ LI GL K GK++E ++ M G +Y ++
Sbjct: 618 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 677
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
KR A +++ +M+ +P+ V Y ++I GLC ++ +++ M ++G P
Sbjct: 678 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 737
Query: 373 MGMWREIV 380
+ + ++
Sbjct: 738 VVTYTAMI 745
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 140/339 (41%), Gaps = 40/339 (11%)
Query: 53 KDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIED 112
++ LS + V+++ + P +VIS ++ Y +Y +++ + + E+
Sbjct: 86 REKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEE 145
Query: 113 IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
+Q+I+ + F G F NV+ G S A+E L + + PS T+N
Sbjct: 146 FLQQIRDDDKEVF--GQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN----- 198
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
C + LK L++A + E N +
Sbjct: 199 --------------------------CLIQAFLKA----DRLDSASLIHREMSLANLRMD 228
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
T + LC+ G EA L+E +E DTV + LISGL + EE M L
Sbjct: 229 GFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLN 285
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
RM+ C PN +Y +L G L+KK+ K ++ M+ E PS + L+H C
Sbjct: 286 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 345
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRN 391
+LKKMV+ G +P ++ ++G + KD+ N
Sbjct: 346 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 384
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 142/314 (45%), Gaps = 28/314 (8%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGNM-AG 142
PN YT +I+ +AK+ ++ + + S+G N++ I G+ AG
Sbjct: 509 TPNVVTYTALIHAYLKAKKVSYANELFETM-------LSEGCLPNIVTYSALIDGHCKAG 561
Query: 143 RISKAIETLF------DMPSYNCW----------PSVKTFNLVLNLLVSAKLYGEIQGIY 186
++ KA + D+P + + P+V T+ +L+ + E + +
Sbjct: 562 QVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 621
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ + G E + + L+ GLC+ G L+ A V E + + TYS+L+ +
Sbjct: 622 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 681
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+ A +L +M + V + +I GL K GK +E KL++ M+ KGC PN +Y
Sbjct: 682 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 741
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ G + EL+ RM + ++P++V+Y+ LI C ++ +L++M Q
Sbjct: 742 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 801
Query: 367 QGFVPRMGMWREIV 380
+ +R+++
Sbjct: 802 THWPTHTAGYRKVI 815
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 135/286 (47%), Gaps = 17/286 (5%)
Query: 78 LNQYSKRKDYN---PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++ Y K+ D N PN Y +++ ++ R + ++ + +E C + Y+ +
Sbjct: 582 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG-CE-PNQIVYDAL 639
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G++ +A E +M + ++ T++ +++ K Q + + +
Sbjct: 640 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR----QDLASKVLSKML 695
Query: 195 EIDACCLNI-----LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
E ++C N+ ++ GLC+ G + A+ ++ ++ C+PNV TY+ ++ G G +
Sbjct: 696 E-NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 754
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E LLERM S+G+ + VT+ +LI K G ++ LLE MK ++A Y++V
Sbjct: 755 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 814
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+ G K F E+ L+ + + +P Y+ LI L + +E
Sbjct: 815 IEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLE 858
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 23/255 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +YT +I+ L + + D +MQ ++ EK C+ + + +I +G M G+I +
Sbjct: 701 PNVVIYTEMIDGLCKVGKTDEAYKLMQMME-EKGCQPNVVTYTAMIDGFG-MIGKIETCL 758
Query: 149 ETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
E L M S P+ T+ ++++ L V+ L E++ + G
Sbjct: 759 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK----- 813
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME- 260
+++G N + +LDE + + P + Y L+ L + +E A LLE +
Sbjct: 814 --VIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 869
Query: 261 -SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S + + T+N LI L KVE +L M KG P S+ ++ GL +
Sbjct: 870 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 929
Query: 320 PEA---KELVGRMIC 331
EA + + M+C
Sbjct: 930 SEALLLLDFISHMVC 944
>gi|359496222|ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 136/279 (48%), Gaps = 3/279 (1%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
++ + S K + Y + LA+AK+F IEDI++ K ++ F +
Sbjct: 40 MVDKFKKSSDSKRFRSRYGYYEKAVLTLAKAKKFSFIEDILEHQKQYNEIS-TEVFAVRL 98
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS-AAKL 192
+ +YG AG A + ++P NC +V +FN +L++ V++K + +I G + L
Sbjct: 99 MTLYGK-AGMFEHAHKLFDELPKLNCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNL 157
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
GV D NI++ CE G+L++A VLDE K EP++ T++TL++ + G+ +
Sbjct: 158 GVVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADG 217
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ + M+ + + ++N + G+ + ++ E ++L++ MK G P+ + ++ G
Sbjct: 218 EKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKG 277
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ EAK + + P +Y LI L +
Sbjct: 278 FCNAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEK 316
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 5/235 (2%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
AL ++ +N +K+FD I+ Q + L D YN+I G + A+ L
Sbjct: 132 ALLSVCVN----SKKFDKIDGFFQELP-GNLGVVPDVVSYNIIVNAFCEMGSLDSALSVL 186
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+M P + TFN +LN Y + + I+ K V + N L+G+
Sbjct: 187 DEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISE 246
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
+ A ++DE +P+V T ++LM G C GN+EEA + + T+
Sbjct: 247 NRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATY 306
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
LI L ++G + +L + + + A Q+VL GL+ + + EA ELV
Sbjct: 307 MTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELV 361
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 6/211 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI--KIYGNMAGRISK 146
P+ Y +I+N + D+ ++ ++EK+ D +N + Y N + +
Sbjct: 161 PDVVSYNIIVNAFCEMGSLDSALSVLD--EMEKVGLEPDLITFNTLLNAFYQNGSYADGE 218
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
I L M N P+V+++N L ++S E + G++ D LN L+K
Sbjct: 219 KIWDL--MKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMK 276
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
G C GNLE A E + P TY TL+ L EKG+ + A L + + S
Sbjct: 277 GFCNAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLI 336
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
+ ++ GL K+ K+EE +L+E K K
Sbjct: 337 EPALLQQVLEGLVKESKIEEATELVELAKLK 367
>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 595
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 120/238 (50%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A++ M + +P VK FNL+ ++ K Y + + +GV+ + NI
Sbjct: 59 VDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNI 118
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ LC + F VL K EP++ T++T+++GLC +GNV +A ++ ++ G
Sbjct: 119 VINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMG 178
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
++D T +I+GL K G + L++M+ + C + +Y V+ GL EA
Sbjct: 179 YESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAW 238
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+L +M + + P +Y LIHGLCN ++ +L M+++G +P + + I G
Sbjct: 239 DLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGG 296
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 129/314 (41%), Gaps = 68/314 (21%)
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC----------W-------- 160
V+ LC+ DG + ++ M G K I+ D+ +YNC W
Sbjct: 225 VDGLCK--DGMVFEAWDLFSQMTG---KGIQP--DLFTYNCLIHGLCNFDRWKEAAPLLA 277
Query: 161 --------PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
P V+TFN++ + + + I++ +G+E D + ++ C
Sbjct: 278 NMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLN 337
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
++ A V D ++ C PN+ TY++L+HG CE N+ +A L M + G+D + VT+N
Sbjct: 338 QMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWN 397
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS--------------------------- 305
LI G K GK +L M G P+ +
Sbjct: 398 TLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKM 457
Query: 306 --------YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
Y +L G+ + +A EL + + + V+Y +I+GLC + L++D
Sbjct: 458 NSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDA 517
Query: 358 DWVLKKMVQQGFVP 371
+ +L KM + G P
Sbjct: 518 EDLLMKMEENGCPP 531
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 35/256 (13%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ TF ++N L + +G E D ++ GLC+ G+ AA
Sbjct: 146 PSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSY 205
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + +QNC +V Y+ ++ GLC+ G V EA+ L +M +GI D T+N LI GL
Sbjct: 206 LKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCN 265
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEV-----LYGLLDKKR----------------- 318
+ +E LL M KG P+ ++ + G++ + +
Sbjct: 266 FDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVT 325
Query: 319 -------------FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+A E+ MI + P+ V+Y LIHG C K + + L +MV
Sbjct: 326 YSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMV 385
Query: 366 QQGFVPRMGMWREIVG 381
G P + W ++G
Sbjct: 386 NNGLDPNIVTWNTLIG 401
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 124/269 (46%), Gaps = 18/269 (6%)
Query: 89 PNEALYTLIINKL------AQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNM 140
P+ +T I+N L AQA RF D ++D+ R++ G N + K+
Sbjct: 146 PSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESD-----RYTRGAIINGLCKV---- 196
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G S A+ L M NC V +N V++ L + E +++ G++ D
Sbjct: 197 -GHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFT 255
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ GLC + A +L ++ P+V+T++ + + G + A + M
Sbjct: 256 YNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMG 315
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
GI+ D VT++ +I ++++ M++ + M KGC PN +Y +++G + K
Sbjct: 316 HMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMN 375
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLC 349
+A +G M+ + P+ V++ LI G C
Sbjct: 376 KAMYFLGEMVNNGLDPNIVTWNTLIGGFC 404
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 87/165 (52%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG+ A E F M + P ++T ++L+ L + E ++ K+ ++D
Sbjct: 406 AGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIII 465
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+I+L G+C +G L A + + + +V TY+ +++GLC++G +++A LL +ME
Sbjct: 466 YSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKME 525
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G D T+N+ + GL ++ ++ + K L MKGKG N+ +
Sbjct: 526 ENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATT 570
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 89/173 (51%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
++KA+ L +M + P++ T+N ++ A + ++ K G D I
Sbjct: 374 MNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAI 433
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L GL + A + E K N + ++ YS +++G+C G + +A L + S+G
Sbjct: 434 ILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKG 493
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ D VT+NI+I+GL K+G +++ LL +M+ GC P+ +Y + GLL +
Sbjct: 494 VKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRR 546
>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 117/246 (47%), Gaps = 4/246 (1%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AGRI KA+ + M C P + T+N++LN + ++ E + +E D
Sbjct: 233 AGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYS 292
Query: 201 LNILLKGLCENGNLEAA--FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N LLK C+ + + A F V PK C+ V +Y+T++ C N A+ L E
Sbjct: 293 YNQLLKAHCKANHPDKAYLFMVTKMVPKGFCD--VVSYNTIIKAFCSISNNRRAYKLFEE 350
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M +GI D VTF ILI ++G + KLL+ M G G P+ Y ++ +
Sbjct: 351 MGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGK 410
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
A + M+ + ++P VSY LI+G C V +V + ++M+Q+G P ++
Sbjct: 411 VEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKL 470
Query: 379 IVGCVT 384
I+G +
Sbjct: 471 IIGALV 476
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 1/234 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG I A++ +M C +N + +L+ + Y+ A LG + +
Sbjct: 22 AGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFT 81
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ + GLC+ +L + K +C P++ ++ ++ L + E A + RM
Sbjct: 82 YSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMV 141
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G + D VTF I+I GL K K + ++ M KG P++ + + GL D +
Sbjct: 142 ERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVD 201
Query: 321 EAKELVGRMICERMSP-SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
A EL+ +I +S S + Y LI G C ++ ++ M + G P +
Sbjct: 202 LAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDL 255
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 129/352 (36%), Gaps = 79/352 (22%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK---AIET 150
Y+ I+ L Q K F I+++++ +EKL D + +N IY N+ R ++ A+E
Sbjct: 82 YSRFISGLCQTKEFTFIDNLLK--DMEKLHCVPDIWAFN---IYLNLLFRENREESALEV 136
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV---------------- 194
M P V TF ++++ L K + + + G+
Sbjct: 137 FGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCD 196
Query: 195 --------------------EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E+ N L+ G C G ++ A ++ + C+P++
Sbjct: 197 GGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLV 256
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGID----------------------------- 265
TY+ L++ C + EEA LL++ME I+
Sbjct: 257 TYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTK 316
Query: 266 ------ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
D V++N +I KL E M KG P+ ++ ++ L +
Sbjct: 317 MVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNS 376
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
AK+L+ M + P + Y +I C VE + MV++G P
Sbjct: 377 DMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITP 428
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 112/230 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+S A+ M C P+V T+N ++ + + + + GVE D
Sbjct: 314 GRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTY 373
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+L++G C +G++E+AF +L + TY+ L+ LC+ G V+EA L + +E
Sbjct: 374 NLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEY 433
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
GI ++VTFN +I+GL K GK + LE+M GC P++ +Y + L K E
Sbjct: 434 RGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSRE 493
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ M+ + + PS V+Y +I L ++ + +MV G P
Sbjct: 494 GLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSP 543
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 136/290 (46%), Gaps = 18/290 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P T ++N + R + + +K+ K C + + +++ + N+ G++ KA+
Sbjct: 298 PCAVTCTAVVNAYCREGRMSGAVRVFESMKL-KGCEPNVWTYNAMVQGFCNV-GKVYKAM 355
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE-IQGIYTSAAKL-------GVEIDACC 200
L M P V T+NL++ G+ I G SA +L G+ D
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIR--------GQCIDGHIESAFRLLRLMEGNGLAADQYT 407
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ LC+ G ++ A + D + PN T++T+++GLC+ G + A LE+M
Sbjct: 408 YNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMV 467
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S G DT T++ I L K EG+ ++ M K P++ +Y V+ L ++ +
Sbjct: 468 SAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYG 527
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
A + G+M+ SP V+Y + CN+ + + + V+ +M + G +
Sbjct: 528 LATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGII 577
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ + + +++L + E + + G+ A ++ C G + A V
Sbjct: 263 PATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRV 322
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ + CEPNV TY+ ++ G C G V +A LL++M G++ D VT+N+LI G
Sbjct: 323 FESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCI 382
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G +E +LL M+G G + +Y ++ L + EA L + + P+ V+
Sbjct: 383 DGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVT 442
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +I+GLC + L+KMV G P
Sbjct: 443 FNTVINGLCKGGKFDVACTFLEKMVSAGCAP 473
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 5/228 (2%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ T+N ++ L Q + + G DA N L+ G C L+ A +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
D+ P + + +Y+ L+ G CE G V+EA L +E D T L+ GL
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCD 242
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+ EEG+ +L++MK G P + +Y ++ +++ EA++++ M + P V+
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
+++ C + + V + M +G P + + +V G GK
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGK 350
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 116/292 (39%), Gaps = 8/292 (2%)
Query: 83 KRKDYNPNEALYTLIIN---KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
K K PN Y ++ + + + A+ D M+ VE D YN++
Sbjct: 327 KLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEP-----DVVTYNLLIRGQC 381
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ G I A L M T+N++++ L E ++ G+ ++
Sbjct: 382 IDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSV 441
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N ++ GLC+ G + A L++ C P+ TYS + LC+ E ++ M
Sbjct: 442 TFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEM 501
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ + TV + I+I L K+ ++ +M GC P+ +Y + ++ R
Sbjct: 502 LQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRL 561
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA+ +V M + ++Y LI G + + +LK M +P
Sbjct: 562 HEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMP 613
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 115/287 (40%), Gaps = 41/287 (14%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R + P+ + +I + ++ D +D+ ++ + + D Y + GR
Sbjct: 157 RSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQ--DAVSYAALIEGFCETGR 214
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+E ++ E +YT AA
Sbjct: 215 VDEALELFREL--------------------------EQPDMYTHAA------------- 235
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+KGLC+ E Y+L + + P R Y+ L+ C + EEA +L M G
Sbjct: 236 LVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNG 295
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT +++ ++G++ +++ E MK KGC PN +Y ++ G + + +A
Sbjct: 296 LVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAM 355
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
L+ +M + P V+Y LI G C +E +L+ M G
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLA 402
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 131/347 (37%), Gaps = 66/347 (19%)
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIK---------IYG-NMAGRISKAIETLFDMPSYNC 159
I+ + + KV++ C DG Y I+ I G G+ A L M S C
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGC 471
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN--ILLKGLCENGNLEAA 217
P T++ + L K G +G+ L ++ +N I++ L + N A
Sbjct: 472 APDTYTYSPFIENLCKTK--GSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLA 529
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+ + C P+V TY+T + C +G + EA ++ M+ GI D + +N LI G
Sbjct: 530 TRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDG 589
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPN----------------------------------- 302
GK + + +L+ M G PN
Sbjct: 590 HTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELAD 649
Query: 303 ----------------SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+ +Y +L G +++R E LV M + + + Y L++
Sbjct: 650 VFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVN 709
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNR 392
C ++ D +L M+ GF+P + ++ ++ G G+ +R +
Sbjct: 710 CFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAK 756
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 110/281 (39%), Gaps = 26/281 (9%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ YT + R E+++ +K + D YN + G+ A
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGI--IVDAMAYNTLIDGHTSIGKTDHA 599
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M P+ TF +L + + E + T++ +E+
Sbjct: 600 VTILKHMTGVASMPNHFTF-FILLRHLLQRRLAEDVPLKTTSVWKTIEL----------- 647
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPN-VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
A + L E K+N P+ R Y ++ G E+ ++E L+ M+ + +
Sbjct: 648 --------ADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPL 699
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ + L++ K + LL M G G PN SYQ +L G + + AKE+
Sbjct: 700 NEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIF 759
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQ---KLVEDVDWVLKKM 364
+ + + + +K +I GL Q + D+ +L++M
Sbjct: 760 RGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQM 800
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 140/326 (42%), Gaps = 38/326 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
KR+++ + + Y +I L +A+ + + +Q + S ++K G A
Sbjct: 118 KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGR-AK 176
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT--------------- 187
+SKA+ + C P+ T+N V+ +L+ + ++ +YT
Sbjct: 177 MVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITY 236
Query: 188 --------------SAAKLGVEIDACCL-------NILLKGLCENGNLEAAFYVLDEFPK 226
SA +L E+ C+ LL + G +E A + +E +
Sbjct: 237 SALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR 296
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
C P V TY+ L+ GL + G V+EA+G + M +G+ D V N L++ L K G+VEE
Sbjct: 297 AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEE 356
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKK-RFPEAKELVGRMICERMSPSFVSYKKLI 345
+ M C P SY V+ L + K E +M + +SPS +Y LI
Sbjct: 357 LTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILI 416
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVP 371
G C VE +L++M ++GF P
Sbjct: 417 DGYCKTNRVEKALLLLEEMDEKGFPP 442
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 131/329 (39%), Gaps = 50/329 (15%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG------FFYNVIKI 136
KR +P YT +I L +A R D + + DG F N++ I
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM-------LRDGLTPDVVFLNNLMNI 347
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY-GEIQGIYTSAAKLGVE 195
G + GR+ + +M + C P+V ++N V+ L +K + E+ + V
Sbjct: 348 LGKV-GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP------------------------ 231
+IL+ G C+ +E A +L+E ++ P
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADEL 466
Query: 232 ---------NV--RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
NV R Y+ ++ + G + EA L M+++G D +N L+SG+ K
Sbjct: 467 FKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVK 526
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G + E LL +M+ GC + S+ +L G A E+ + + P V+
Sbjct: 527 AGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVT 586
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
Y L+ + + E+ ++++M +GF
Sbjct: 587 YNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 11/320 (3%)
Query: 38 ASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPIS----VISVLNQYSKRKDY--NPNE 91
A D + YK +D L+P V +NL + + V + N +S+ + P
Sbjct: 316 AGRVDEAYGFYKDMLRDGLTPDVVF--LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 92 ALYTLIINKLAQAK-RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET 150
Y +I L ++K + ++K + + F Y+++ R+ KA+
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVS--PSEFTYSILIDGYCKTNRVEKALLL 431
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
L +M P + ++N L AK Y ++ + + + +++K +
Sbjct: 432 LEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGK 491
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G L A + +E Q P+V Y+ LM G+ + G + EA LL +ME G AD +
Sbjct: 492 CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINS 551
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
NI+++G + G +++ E +K G P+ +Y +L F EA ++ M
Sbjct: 552 HNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMK 611
Query: 331 CERMSPSFVSYKKLIHGLCN 350
+ ++Y ++ + N
Sbjct: 612 DKGFEYDAITYSSILDAVGN 631
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 140/326 (42%), Gaps = 38/326 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
KR+++ + + Y +I L +A+ + + +Q + S ++K G A
Sbjct: 118 KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGR-AK 176
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT--------------- 187
+SKA+ + C P+ T+N V+ +L+ + ++ +YT
Sbjct: 177 MVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITY 236
Query: 188 --------------SAAKLGVEIDACCL-------NILLKGLCENGNLEAAFYVLDEFPK 226
SA +L E+ C+ LL + G +E A + +E +
Sbjct: 237 SALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR 296
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
C P V TY+ L+ GL + G V+EA+G + M +G+ D V N L++ L K G+VEE
Sbjct: 297 AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEE 356
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKK-RFPEAKELVGRMICERMSPSFVSYKKLI 345
+ M C P SY V+ L + K E +M + +SPS +Y LI
Sbjct: 357 LTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILI 416
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVP 371
G C VE +L++M ++GF P
Sbjct: 417 DGYCKTNRVEKALLLLEEMDEKGFPP 442
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 131/329 (39%), Gaps = 50/329 (15%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG------FFYNVIKI 136
KR +P YT +I L +A R D + + DG F N++ I
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM-------LRDGLTPDVVFLNNLMNI 347
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY-GEIQGIYTSAAKLGVE 195
G + GR+ + +M + C P+V ++N V+ L +K + E+ + V
Sbjct: 348 LGKV-GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP------------------------ 231
+IL+ G C+ +E A +L+E ++ P
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 232 ---------NV--RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
NV R Y+ ++ + G + EA L M+++G D +N L+SG+ K
Sbjct: 467 FKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVK 526
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G + E LL +M+ GC + S+ +L G A E+ + + P V+
Sbjct: 527 AGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVT 586
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
Y L+ + + E+ ++++M +GF
Sbjct: 587 YNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 11/320 (3%)
Query: 38 ASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPIS----VISVLNQYSKRKDY--NPNE 91
A D + YK +D L+P V +NL + + V + N +S+ + P
Sbjct: 316 AGRVDEAYGFYKDMLRDGLTPDVVF--LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 92 ALYTLIINKLAQAK-RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET 150
Y +I L ++K + ++K + + F Y+++ R+ KA+
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVS--PSEFTYSILIDGYCKTNRVEKALLL 431
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
L +M P + ++N L AK Y ++ + + + +++K +
Sbjct: 432 LEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGK 491
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G L A + +E Q P+V Y+ LM G+ + G + EA LL +ME G AD +
Sbjct: 492 CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINS 551
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
NI+++G + G +++ E +K G P+ +Y +L F EA ++ M
Sbjct: 552 HNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMK 611
Query: 331 CERMSPSFVSYKKLIHGLCN 350
+ ++Y ++ + N
Sbjct: 612 DKGFEYDAITYSSILDAVGN 631
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 118/225 (52%), Gaps = 6/225 (2%)
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+E ++ P+V TFN+++N L + Q I+ K G++ A N L+
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275
Query: 207 GLCENGNLEAAF---YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
G C++GNLE F V++EF P+V TYS L+ GLC++ +E+A L + M G
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEF---RVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRG 332
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + VTF LI+G K G+V+ +++ ++M KG + Y ++ GL F EA+
Sbjct: 333 LVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREAR 392
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ VG M + P +Y L+ G C + +E + K+MV++G
Sbjct: 393 KFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEG 437
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 128/289 (44%), Gaps = 2/289 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
++ P + +IN ++ + E ++ +E+ F D F Y+ +
Sbjct: 259 RKTGLQPTAVSFNTLINGYCKSGNLE--EGFRLKMVMEEFRVFPDVFTYSALIDGLCKEC 316
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ A +M P+ TF ++N IY G++ D N
Sbjct: 317 QLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYN 376
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC+ G A + E K+ P+ TY+TL+ G C++G++E A + + M E
Sbjct: 377 TLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKE 436
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI D V F +ISGL + GK+ + + L M G P+ +Y V+ G K
Sbjct: 437 GIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMG 496
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L+ M + P ++Y L++GLC Q V++ D +L M+ G VP
Sbjct: 497 FKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVP 545
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 87/171 (50%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ LC+ G ++ A + DE K +P +++TL++G C+ GN+EE F L ME
Sbjct: 235 FNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVME 294
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ D T++ LI GL K+ ++E+ L + M +G PN ++ ++ G R
Sbjct: 295 EFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVD 354
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A E+ +M + + V Y LI GLC + + +M ++G +P
Sbjct: 355 LALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIP 405
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 3/251 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ A+E M + + +N +++ L + E + K G+ D
Sbjct: 351 GRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTY 410
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
LL G C+ G+LE A + E K+ + + ++ ++ GLC G + +A L M
Sbjct: 411 TTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLR 470
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D T+ +++ G K+G V+ G KLL+ M+ G P +Y ++ GL + +
Sbjct: 471 AGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKN 530
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A L+ M+ + P ++Y L+ G C + D V +M G V +R ++
Sbjct: 531 ADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM---GLVSDYASYRSLLH 587
Query: 382 CVTFGKDNRNR 392
++ +R +
Sbjct: 588 ELSKASKDRQK 598
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 86/168 (51%), Gaps = 1/168 (0%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PNV T++ LM+ LC++G V++A + + + G+ V+FN LI+G K G +EEG +L
Sbjct: 230 PNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRL 289
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
M+ +P+ +Y ++ GL + + +A L M + P+ V++ LI+G C
Sbjct: 290 KMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCK 349
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTE 397
V+ + ++M +G + ++ ++ G G R +V E
Sbjct: 350 NGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGE 397
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 135/303 (44%), Gaps = 21/303 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-----R 143
P Y+++I+ +A+R D C G +VI + + G R
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFG-------CLLRQGMKADVIVVSSLLRGLCDAKR 153
Query: 144 ISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+A++ LF MP C P +++ VL + I A K G C N
Sbjct: 154 TDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQG---GGCPCN 210
Query: 203 ILL-----KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+++ GL + G + A + E +Q PNV TY++++H LC+ V++A G+L
Sbjct: 211 VVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILR 270
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
+M G+ D VT+N LI G G+ ++ +++ + M +G PN+ + + L
Sbjct: 271 QMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHG 330
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
R EA+E M+ + + +SY L+HG + D+ + MV+ G VP ++
Sbjct: 331 RIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFN 390
Query: 378 EIV 380
+V
Sbjct: 391 ILV 393
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 112/265 (42%), Gaps = 35/265 (13%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ +A + +M P+V T+N V++ L A+ + QGI GV+ D
Sbjct: 225 GKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTY 284
Query: 202 NILLKG-----------------------------------LCENGNLEAAFYVLDEFPK 226
N L+ G LC++G +E A D
Sbjct: 285 NTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLA 344
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+ + N+ +YSTL+HG G + + L M +GI + FNIL++G K G V E
Sbjct: 345 KGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVRE 404
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
M + E M+ +G P+ +Y V++ +A + MI + + P+F Y+ LI
Sbjct: 405 AMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQ 464
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
G C + + ++ ++ +G P
Sbjct: 465 GFCTHGDLVKAEELVYEIRNKGLGP 489
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 84/161 (52%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ LC+ G + A + D + + +V +++L+ G C G + EAF + + M S G
Sbjct: 497 LINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVG 556
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I+ D VT+ L++G K G++++G+ L + KG P + +Y +L GL R AK
Sbjct: 557 IEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAK 616
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
E+ MI ++ + +Y L+ GLC E+ V +K+
Sbjct: 617 EMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKL 657
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 126/281 (44%), Gaps = 4/281 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
PN Y +I+ L +A+ D + I++++ + D YN + I+G + G+ +A
Sbjct: 244 PNVVTYNSVIHALCKARAVDKAQGILRQMVGNGV--QPDNVTYNTL-IHGYSTLGQWKQA 300
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +M S P+ T + + L E + + S G +++ + LL G
Sbjct: 301 VRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHG 360
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
G L + + + PN ++ L++G + G V EA + E M+ G++ D
Sbjct: 361 YATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPD 420
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+ +I + G +++ M M KG PN A YQ ++ G +A+ELV
Sbjct: 421 VLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVY 480
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ + + P +S+ LI+ LC + V + + +++ G
Sbjct: 481 EIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTG 521
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 126/296 (42%), Gaps = 6/296 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK--VEKLCRFSDGFFYNVIKIYGNM 140
+++ NP+ Y +I+ R +++D M + ++K + + +I+ +
Sbjct: 413 QKRGLNPDVLTYLAVIHAFC---RMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCT- 468
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + KA E ++++ + P + +F ++N L E Q I+ + G + D
Sbjct: 469 HGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNI 528
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G C G + AF V D EP++ TY TL++G C+ G +++ L +
Sbjct: 529 FTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELL 588
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+G+ T T+ I++ GL G+ ++ + M G +Y +L GL
Sbjct: 589 HKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTE 648
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
EA + ++ + V +I + + E+ + + + G VP + +
Sbjct: 649 EAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTY 704
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 96/211 (45%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+ FN+++N + E I+ K G+ D ++ C G+++ A
Sbjct: 384 PNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDK 443
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ + EPN Y L+ G C G++ +A L+ + ++G+ ++F LI+ L K
Sbjct: 444 FNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCK 503
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G+V E ++ + + G + + ++ G + EA + M+ + P V+
Sbjct: 504 EGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVT 563
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y L++G C ++D + ++++ +G P
Sbjct: 564 YGTLVNGCCKNGRIDDGLILFRELLHKGVKP 594
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 110/247 (44%), Gaps = 1/247 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GRI +A E M + ++ +++ +L+ +A ++ ++ + G+ +
Sbjct: 330 GRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVF 389
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ G + G + A ++ ++ K+ P+V TY ++H C G++++A M
Sbjct: 390 NILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMID 449
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G++ + + LI G G + + +L+ ++ KG P S+ ++ L + R E
Sbjct: 450 KGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFE 509
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV- 380
A+ + +I + LI G C + + V MV G P + + +V
Sbjct: 510 AQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVN 569
Query: 381 GCVTFGK 387
GC G+
Sbjct: 570 GCCKNGR 576
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 103/262 (39%), Gaps = 16/262 (6%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKR-------FDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+ K P + +IN L + R FD I ++ V DG+
Sbjct: 483 RNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGY------ 536
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
+ G++S+A M S P + T+ ++N + ++ GV+
Sbjct: 537 ---CLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVK 593
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
I+L GL G AA + E + + TYS L+ GLC EEA +
Sbjct: 594 PTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITV 653
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+++ + + D V NI+IS + K + EE L + G P +Y ++ L+
Sbjct: 654 FQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIK 713
Query: 316 KKRFPEAKELVGRMICERMSPS 337
+ EA+ + M+ +SP+
Sbjct: 714 EGSVEEAEGVFSVMLKSGLSPT 735
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 8/242 (3%)
Query: 62 LKIFSNLRDPISVISVLNQYSKRKD------YNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+ IF++L D +I +++ + D P+ Y ++N + R D I+
Sbjct: 526 VNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDD-GLILF 584
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
R + K + + F Y +I AGR + A E +M ++ T++++L L
Sbjct: 585 RELLHKGVKPTT-FTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCR 643
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
E ++ + V+ D LNI++ + + E A + P P V+T
Sbjct: 644 NNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQT 703
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y+ +M L ++G+VEEA G+ M G+ + N+++ L ++G++ + + R+
Sbjct: 704 YTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVD 763
Query: 296 GK 297
GK
Sbjct: 764 GK 765
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 20/232 (8%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------GRISKAIET 150
+I K+++A R + D M + +E I YG + GRI +
Sbjct: 538 LIGKMSEAFR---VHDAMVSVGIEP-----------DIVTYGTLVNGCCKNGRIDDGLIL 583
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
++ P+ T+ ++L+ L A + ++ + G+ + +ILL GLC
Sbjct: 584 FRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCR 643
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
N E A V + N + ++ + ++ + + EEA GL + G+ T
Sbjct: 644 NNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQT 703
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ I++ L K+G VEE + M G P S ++ LL+K +A
Sbjct: 704 YTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA 755
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 88/207 (42%), Gaps = 2/207 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P Y +I++ L A R A +++ Q + + + + + N
Sbjct: 590 KGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNC--T 647
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+AI + + N + N++++ + A+ E +G++ S G+ I+
Sbjct: 648 EEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIM 707
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++ L + G++E A V K P + ++ L EKG + +A + R++ + I
Sbjct: 708 MENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSI 767
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLL 291
+ T ++L+S +GK E + LL
Sbjct: 768 LFEASTASMLLSLFSCKGKHREHLNLL 794
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 143/313 (45%), Gaps = 18/313 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK + P+ + Y+ +I L A + + + Q +K+ + D + Y ++ AG
Sbjct: 450 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT--PDVYTYTILIDSFCKAGL 507
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I +A +M S C P+V T+ +++ + AK + I+ G +
Sbjct: 508 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 567
Query: 204 LLKGLCENGNLEAAFYVLDE-------------FP---KQNCEPNVRTYSTLMHGLCEKG 247
L+ GLC+ GN+ AF V + FP + PNV TY L+ GLC+
Sbjct: 568 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 627
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A LL+ M S G + + + ++ LI G K GK++ ++ +M G P+ +Y
Sbjct: 628 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 687
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ + R A +++ +M+ + +P+ V+Y +I GLC E +L M ++
Sbjct: 688 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 747
Query: 368 GFVPRMGMWREIV 380
G P + + ++
Sbjct: 748 GCSPNVVTYTALI 760
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 22/290 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ + K+ + I+ + E C + F +++ Y N + A
Sbjct: 309 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG-CNPNPSLFNSLVHSYCN-EKDYAYAY 366
Query: 149 ETLFDMPSYNCWPSVKTFNLVLN-------------LLVSAKLYGEIQGIYTSAAKLGVE 195
+ L M + C P +N+ + L ++ K+YGE+ K+ V
Sbjct: 367 KLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVA 426
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
A CL C G + AF ++ E ++ P+ TYS ++ LC VE+AF L
Sbjct: 427 NFARCL-------CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLL 479
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
+ M+ G+ D T+ ILI K G +E+ L E M+ GC P +Y +++ L
Sbjct: 480 FQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLK 539
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
K+ P+A ++ RM+ P+ V+Y L+ GLC + V K++
Sbjct: 540 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 589
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 137/341 (40%), Gaps = 37/341 (10%)
Query: 76 SVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIE--DIMQRIK 118
S+++ Y KDY P +Y + I + ++ + + D+ ++I
Sbjct: 351 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIY 410
Query: 119 VEKL---CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
E L C + N + + G+ KA + + +M P T++ V+ L
Sbjct: 411 GEMLAANCVLNKVNVANFARCLCGV-GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 469
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
A + ++ +GV D IL+ C+ G +E A ++ +E C P V T
Sbjct: 470 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 529
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y+ L+H + V +A + RM G + VT+ L+ GL K G + + ++ ++
Sbjct: 530 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 589
Query: 296 GKG----------------CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
G PN +Y ++ GL + A EL+ M+ P+ +
Sbjct: 590 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 649
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI G C ++ V +M + G++P + + ++
Sbjct: 650 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 690
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 143/332 (43%), Gaps = 41/332 (12%)
Query: 53 KDWLSPTEVLKIFSNLRDPISVISVLNQYSKRK-DYNPNEALYTLIINKLAQAKRFDAIE 111
+ +L+ + V+ + +RD + + +++R+ Y+ A Y + + L R E
Sbjct: 100 RGFLTDSVVVAVLGAVRDAPELCARFFLWAERQVGYSHTGACYDALADALGFDGRARDAE 159
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+++ I E R G NV+ G ++A+E L + + PS T+N ++
Sbjct: 160 RLLREIGEED--REVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQ 217
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
+L SA G++ LG + K + E+G + +D F
Sbjct: 218 VLSSA---GQVD--------LGFRVQ--------KEMSESG------FCMDRF------- 245
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
T H LC++G +A ++ER E DTV +ISGL + +E M L
Sbjct: 246 ---TVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFL 299
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
RM+ C PN +Y+ +L G L KK+ K ++ M+ E +P+ + L+H CN+
Sbjct: 300 HRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNE 359
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
K +L +M G P ++ +G +
Sbjct: 360 KDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI 391
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 129/275 (46%)
Query: 97 IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS 156
+I + K D+ + I K + SD + ++ + + +G + AI+
Sbjct: 35 LIRVVVSRKGKDSTSAVFAAILETKGTQISDLYVFSGLMLAYLESGFVRDAIQCFRLTKK 94
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
+ W T VL L+ + + + G Y + G NIL+ C+ G +
Sbjct: 95 HKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEILECGYPPSLYFFNILMHRFCKEGEMRL 154
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A V D K + P+V +++TLM+G G+++E F L M + G+ D T+++LI+
Sbjct: 155 AQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLIN 214
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
GL K+ K++E ++L M G PN ++ ++ G + A E+ +M+ + P
Sbjct: 215 GLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLP 274
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++Y LI+GLC + + ++++M+ +G P
Sbjct: 275 DLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKP 309
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G + A + +FD + ++ PSV +FN ++N + E + +
Sbjct: 137 YFFNILMHRFCKEGEMRLA-QMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKS 195
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A +L+E PN T++TL+ G C+ G
Sbjct: 196 AMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+G D +T+N LI GL ++G + + L+E M KG P+ +Y
Sbjct: 256 KVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYT 315
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + EL RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 316 TLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTV 375
Query: 368 GFVPRMGMWREIV 380
G P G + I+
Sbjct: 376 GLKPDNGTYTMIM 388
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 107/207 (51%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ FN++++ Q ++ + K + N L+ G G+L+ F +
Sbjct: 134 PSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRL 193
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+P+V TYS L++GLC++ ++EA +L M G+ + VTF LI G K
Sbjct: 194 KSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCK 253
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
GKV+ M++ ++M +G P+ +Y ++YGL + +A++LV MI + + P ++
Sbjct: 254 NGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKIT 313
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
Y LI G C + +E + K+M+++
Sbjct: 314 YTTLIDGSCKEGDLEITFELRKRMIRE 340
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 110/218 (50%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P V T+++++N L E + G+ + L+ G C+NG
Sbjct: 197 MHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGK 256
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + + Q P++ TY+TL++GLC +G++ +A L+E M +G+ D +T+
Sbjct: 257 VDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTT 316
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+G +E +L +RM + + +Y ++ GL + R +A++++ M+
Sbjct: 317 LIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVG 376
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P +Y +++ C V+ +L++M + G VP
Sbjct: 377 LKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVP 414
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 79/150 (52%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P++ ++ LMH C++G + A + + + + V+FN L++G + G ++EG +L
Sbjct: 134 PSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRL 193
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
M G P+ +Y ++ GL + + EA E++ M+ + P+ V++ LI G C
Sbjct: 194 KSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCK 253
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
V+ + K+M+ QGF+P + + ++
Sbjct: 254 NGKVDLAMEIYKQMLSQGFLPDLITYNTLI 283
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 2/218 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D +++ + L +G + + G++ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGL--VPNGVTFTTLIDGHCKNGKVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S P + T+N ++ L G+ + + G++ D L+ G
Sbjct: 261 MEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE F + ++N + TY+ L+ GLC +G +A +L M + G+ D
Sbjct: 321 SCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPD 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
T+ ++++ K G V+ KLL M+ G P +
Sbjct: 381 NGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 143/309 (46%), Gaps = 3/309 (0%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N+ ++++IN L RF ++ + + L R +DG ++ AG+ +A+E
Sbjct: 430 NQGSFSMVINWLCLKFRFVTALHFIREMLLRNL-RPNDGLLTTLVSGLCK-AGKQGEAVE 487
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+ P++ T N +++ L A E + + G+ D N L+ G C
Sbjct: 488 LWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCC 547
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ G ++ F + +E K+ +P++ T++ L+HGLC ++EA L + G +
Sbjct: 548 KEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVY 607
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+ ++I G K KVEEG LL + K NS Y ++ A L M
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM 667
Query: 330 ICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT-FGKD 388
+ S +Y L+HGLCN LV+D +L +M ++G +P + + I+G + G+
Sbjct: 668 KSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQM 727
Query: 389 NRNRVYVTE 397
N+ + + E
Sbjct: 728 NKVNIVLQE 736
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 140/291 (48%), Gaps = 4/291 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAG 142
++ +P+ Y++ IN L + ++ D +++ ++ +L + YN +I Y M G
Sbjct: 319 KEKVSPSLITYSVFINGLIKLEKIDEANCVLK--EMSELGFVPNEVVYNTLIDGYCKM-G 375
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
IS+A++ DM S P+ T N ++ + G+ + + G+ I+ +
Sbjct: 376 NISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFS 435
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+++ LC A + + E +N PN +TL+ GLC+ G EA L R+ +
Sbjct: 436 MVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGK 495
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + VT N LI GL K G ++E +KLL M +G + +Y ++ G + + E
Sbjct: 496 GFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEG 555
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
EL M+ + + P ++ L+HGLCN +++ + + + G+VP +
Sbjct: 556 FELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNV 606
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 2/228 (0%)
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
+PS+KT +L+ LV A + +Y G+ D + ++ C+ + A
Sbjct: 218 FPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIG 277
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + K PNV TY+ ++HGLC+ G ++EA+ E+M E + +T+++ I+GL
Sbjct: 278 LFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLI 337
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K K++E +L+ M G PN Y ++ G EA ++ M+ + +SP+ V
Sbjct: 338 KLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSV 397
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG--CVTF 385
+ LI G C + + VL++M+ +G G + ++ C+ F
Sbjct: 398 TLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKF 445
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 139/319 (43%), Gaps = 45/319 (14%)
Query: 85 KDYNPNEALYTLIINKLAQA----KRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM 140
K + PN +I+ L +A + + D+++R V D YN +
Sbjct: 495 KGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLV------FDRITYNTLISGCCK 548
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA-------KLYGEIQ--GIYTSAAK 191
G++ + E +M P + TFNL+L+ L +A +L+ E + G +
Sbjct: 549 EGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYT 608
Query: 192 LGVEIDACC--------------------------LNILLKGLCENGNLEAAFYVLDEFP 225
GV ID C N L++ C NGN+ AAF + D+
Sbjct: 609 YGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMK 668
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
+ + TYS+LMHGLC G V++A LL+ M EG+ + V + +I G K G++
Sbjct: 669 SRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMN 728
Query: 286 EGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLI 345
+ +L+ M +PN +Y ++ G + EA +L+ M + + P V+Y
Sbjct: 729 KVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFT 788
Query: 346 HGLCNQKLVEDVDWVLKKM 364
+GLC + VE+ V +M
Sbjct: 789 NGLCKEGKVEEAFKVCDEM 807
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 143/301 (47%), Gaps = 5/301 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
P+ L++ +IN + R D + I K+EKL + YN I I+G +GR+ +A
Sbjct: 254 PDVHLFSTMINAFCKGHRED--DAIGLFSKMEKLGVAPNVVTYNNI-IHGLCKSGRLDEA 310
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
M PS+ T+++ +N L+ + E + ++LG + N L+ G
Sbjct: 311 YRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDG 370
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ GN+ A + D+ + PN T ++L+ G C+ + +A +LE M G+ +
Sbjct: 371 YCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPIN 430
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+F+++I+ L + + + + M + PN ++ GL + EA EL
Sbjct: 431 QGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWC 490
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV-PRMGMWREIVGCVTFG 386
R++ + P+ V+ LIHGLC +++ +L+ M+++G V R+ I GC G
Sbjct: 491 RLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEG 550
Query: 387 K 387
K
Sbjct: 551 K 551
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 14/293 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF-SDGFFYNVIK----IYG- 138
++ PN+ L T +++ L +A + Q VE CR GF N++ I+G
Sbjct: 460 RNLRPNDGLLTTLVSGLCKAGK--------QGEAVELWCRLLGKGFVPNIVTSNALIHGL 511
Query: 139 NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
AG + + ++ L DM T+N +++ E + K G++ D
Sbjct: 512 CKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDI 571
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
N+LL GLC ++ A + E K PNV TY ++ G C+ VEE LL
Sbjct: 572 YTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNE 631
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
+ S+ ++ ++V +N LI G + +L + MK +G + A+Y +++GL +
Sbjct: 632 LVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGL 691
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+AK L+ M E + P+ V Y +I G + V+ VL++M P
Sbjct: 692 VDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHP 744
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%)
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
+G +++ AK G+ LL L + L+ ++ V D P+V +ST
Sbjct: 202 FGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFST 261
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
+++ C+ ++A GL +ME G+ + VT+N +I GL K G+++E + E+M +
Sbjct: 262 MINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK 321
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
P+ +Y + GL+ ++ EA ++ M P+ V Y LI G C + +
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEAL 381
Query: 359 WVLKKMVQQGFVP 371
+ M+ +G P
Sbjct: 382 KIRDDMLSKGISP 394
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 152/305 (49%), Gaps = 12/305 (3%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF-SDGFF 130
++V +++Y +D + + I++ L ++KR + ++ + +K +F +D
Sbjct: 147 VTVFMSMHEYGCFQDLSS----FNTILDVLCKSKRVEMAYNLFKALK----GKFKADCVS 198
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN+I + R KA+E L +M P++ T+N++LN A E G +
Sbjct: 199 YNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMK 258
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
K +ID ++ GL G ++ A V ++ K P+V T++ L+ LC+K +VE
Sbjct: 259 KRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVE 318
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A + E M G +++T+N++I GL G+++ M+L+ERM+ C PN +Y ++
Sbjct: 319 NAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILI 378
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV---DWVLKKMVQQ 367
D + +L +M P+ +Y LI+ + +K +++ +L +MV +
Sbjct: 379 RYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDR 438
Query: 368 GFVPR 372
GF+PR
Sbjct: 439 GFLPR 443
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 143/335 (42%), Gaps = 47/335 (14%)
Query: 103 QAKRFDAIEDIMQRIK--------VEKL--CRF--SDGFFYNVIKIYGNMAGRISKAIET 150
QA FD DI R++ V ++ CR S F + + Y M G+ +A+
Sbjct: 91 QASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAM-GKPHRAVTV 149
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAK-------LYGEIQGIYTS-AAKLGVEIDACCL- 201
M Y C+ + +FN +L++L +K L+ ++G + + + ++ CL
Sbjct: 150 FMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVNGWCLI 209
Query: 202 -------------------------NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
NI+L G G A+ E K+ C+ +V TY
Sbjct: 210 KRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTY 269
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
++++HGL G ++ A + +M +G+ TFN LI L K+ VE + + E M
Sbjct: 270 TSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVK 329
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+G PNS +Y V+ GL A EL+ RM + P+ +Y LI C+ +E
Sbjct: 330 RGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEK 389
Query: 357 VDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRN 391
+ +KM +P + + ++ + K++ N
Sbjct: 390 GLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDN 424
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 5/245 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ PN Y +++N +A + + +K K C + +VI G + G I
Sbjct: 225 RGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRK-CDIDVVTYTSVIHGLG-VVGEI 282
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A M PSV TFN ++ +L I+ K G ++ N++
Sbjct: 283 KRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLV 342
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++GLC G ++ A +++ +CEPNV+TY+ L+ C+ G +E+ L ++M +
Sbjct: 343 IRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDC 402
Query: 265 DADTVTFNILISGL---RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ T+NILI+ + + + KLL M +G P ++ VL GLL
Sbjct: 403 LPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGNQDF 462
Query: 322 AKELV 326
AKE++
Sbjct: 463 AKEIL 467
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 19/148 (12%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ Y PN Y L+I L ++M+R++ + C + YN++ Y AG
Sbjct: 329 KRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDD-CE-PNVQTYNILIRYFCDAGE 386
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVL----------NLLVSAKLYGEIQGIYTSAAKLG 193
I K ++ M + +C P++ T+N+++ NLLV+ KL E+ G
Sbjct: 387 IEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEM-------VDRG 439
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVL 221
N +L GL GN + A +L
Sbjct: 440 FLPRKLTFNRVLDGLLLTGNQDFAKEIL 467
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 120/241 (49%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A ++ KAI+ + M P ++ +++ L G + + G +
Sbjct: 110 ACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVT 169
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L++GLC +GNL + +LD ++ PN TYS L+ ++ +EA LL+ +
Sbjct: 170 YNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEII 229
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++G + + V++N+L++GL K+G+ E+ ++L + KG PN SY +L L ++ R+
Sbjct: 230 AKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWE 289
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA L+ M + SPS V+Y LI L E VL++M++ F P + I+
Sbjct: 290 EANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPII 349
Query: 381 G 381
Sbjct: 350 A 350
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 92/170 (54%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL LC+ + A V++ P+ +Y+ L+ LC KGNV A L+++ME G
Sbjct: 103 LLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYG 162
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+TVT+N L+ GL G + + ++LL+R+ KG PN+ +Y +L ++ EA
Sbjct: 163 YPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAS 222
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+L+ +I + P+ VSY L+ GLC + ED + +++ +GF P +
Sbjct: 223 KLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNV 272
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 129/277 (46%), Gaps = 5/277 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRI-KVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ + YT +++ L R + MQ + K+E+ ++ YN + M G ++++
Sbjct: 130 PDASSYTFLVSSLC---RKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQS 186
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ L + P+ T++ +L + E + G E + N+LL G
Sbjct: 187 LQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTG 246
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G E A + E P + PNV +Y+ L+ LC +G EEA LL M +
Sbjct: 247 LCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPS 306
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TVT+NILI L G+ E +++LE M P ++SY ++ L + + +
Sbjct: 307 TVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLD 366
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+M+ +P+ +Y I LC + +V++ +++ +
Sbjct: 367 QMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSL 402
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 155/380 (40%), Gaps = 43/380 (11%)
Query: 44 DHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQ 103
+ + Y N + S L + NL + ++ L Q K PN Y+ ++ +
Sbjct: 159 EEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQ----KGLVPNAYTYSFLLEAAYK 214
Query: 104 AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSV 163
+ D ++ I + + YNV+ GR AI ++PS P+V
Sbjct: 215 ERGADEASKLLDEIIAKG--GEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNV 272
Query: 164 KTFNLVLNLLVSAK-------LYGEIQGIYTSAAKLGVEI-------------------- 196
++N++L L + L E+ G S + + I
Sbjct: 273 VSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEE 332
Query: 197 --------DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
A N ++ LC++G L+ LD+ ++C PN TY+ + LCE+G
Sbjct: 333 MIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCEEGM 391
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V+EAF +++ + ++ + + I+I+ L ++G +LL M G P+S +Y
Sbjct: 392 VQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSS 451
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ GL + EA E+ M E P +Y LI G C + + V + MV +G
Sbjct: 452 LIRGLCMEGMLNEAIEIFSVME-ENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGKG 510
Query: 369 FVPRMGMWREIVGCVTFGKD 388
++P + +V + K+
Sbjct: 511 YLPNETTYTILVEGIIHEKE 530
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 14/244 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRF-SDGFFYNVIKIYGNMAGRIS 145
+P+ Y ++I LA R + A+E + + I+ RF YN I + G++
Sbjct: 304 SPSTVTYNILIGSLALHGRTEHALEVLEEMIRA----RFKPTASSYNPIIAHLCKDGKLD 359
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC---LN 202
++ L M +C P+ T+N + L G +Q ++ LG + +
Sbjct: 360 LVVKCLDQMMYRHCNPNEGTYNAIATLCEE----GMVQEAFSIIQSLGNKQHSSTQEFYK 415
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ LC GN AF +L E K P+ TYS+L+ GLC +G + EA + ME E
Sbjct: 416 IVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME-E 474
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
DT +N LI G K + + + + E M GKG PN +Y ++ G++ +K A
Sbjct: 475 NNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLA 534
Query: 323 KELV 326
+++
Sbjct: 535 TKVL 538
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 135/301 (44%), Gaps = 14/301 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K ++PN Y +++ L R++ ++ + ++ R YN++ + GR
Sbjct: 266 KGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDE--RSPSTVTYNILIGSLALHGRT 323
Query: 145 SKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEI----QGIYTSAAKLGVEIDAC 199
A+E L +M P+ ++N ++ +L KL + Q +Y +A
Sbjct: 324 EHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA- 382
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+ LCE G ++ AF ++ + Y ++ LC KGN AF LL M
Sbjct: 383 -----IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEM 437
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G D+ T++ LI GL +G + E +++ M+ + P++ +Y ++ G +R
Sbjct: 438 TKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME-ENNKPDTENYNSLILGCCKSRRT 496
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A ++ M+ + P+ +Y L+ G+ ++K ++ VL+++ + + + + R +
Sbjct: 497 DLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQSTLERLV 556
Query: 380 V 380
+
Sbjct: 557 M 557
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 95/213 (44%), Gaps = 6/213 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R + P + Y II L + + D + + ++ + + C ++G YN I G
Sbjct: 335 RARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQM-MYRHCNPNEGT-YNAIATLCE-EGM 391
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-SAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ +A + + + + + + +V+ L Y Q +Y K G D+ +
Sbjct: 392 VQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLY-EMTKYGFTPDSFTYS 450
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L++GLC G L A + ++N +P+ Y++L+ G C+ + A + E M +
Sbjct: 451 SLIRGLCMEGMLNEAIEIFSVM-EENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGK 509
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
G + T+ IL+ G+ + +++ K+L ++
Sbjct: 510 GYLPNETTYTILVEGIIHEKEMDLATKVLRELQ 542
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 122/252 (48%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+F+N++ G I A + + PSV +FN ++N + E + +
Sbjct: 137 YFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSV 196
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
GV+ D ++L+ GLC+ ++ A + DE PN T++TL+ G C+ G
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V+ A + +M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 257 VDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G + A E RMI E + V+Y LI LC + D + +L++M+ G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVG 376
Query: 369 FVPRMGMWREIV 380
P +G + I+
Sbjct: 377 LKPEIGTYTMII 388
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
GF + I+ Y R++K E F +P C V+ L+ K + + G Y
Sbjct: 80 GFLRDAIECY-----RLTK--EHKFRVPFDTCRK-------VIEHLMKLKYFKLVWGFYE 125
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ + G NIL+ C+ G + A V D K P+V +++TLM+G + G
Sbjct: 126 ESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIG 185
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+++E F L M++ G+ D T+++LI+GL K+ K+++ L + M G PN ++
Sbjct: 186 DLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFT 245
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G R A E+ +M+ + + P ++Y LI+GLC + ++ ++ +M +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 368 GFVP 371
G P
Sbjct: 306 GLKP 309
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 6/209 (2%)
Query: 162 SVKTFNLVLNLLVSAKLYGEI---QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
S+ FN++++ GEI Q ++ S K G+ N L+ G + G+L+ F
Sbjct: 135 SLYFFNILMHNFCKG---GEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGF 191
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+ +P+V TYS L++GLC++ +++A L + M G+ + VTF LI G
Sbjct: 192 RLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G+V+ M++ +M + P+ +Y ++YGL K +A++L+ M + + P
Sbjct: 252 CKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++Y LI G C + +E K+M+++
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 114/220 (51%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P V T+++++N L + ++ G+ + L+ G C+NG
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+
Sbjct: 257 VDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+G +E + +RM + + +Y ++ L + R +A++++ M+
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVG 376
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ P +Y +I+ C + V +LK+M + G++P +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNV 416
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 2/218 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D + + L +G + + GR+ A
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLV--PNGVTFTTLIDGHCKNGRVDLA 260
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + Q + + G++ D L+ G
Sbjct: 261 MEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ G+LE AF K+N + Y+ L+ LC++G +A +L M S G+ +
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
T+ ++I+ K+G V G KLL+ M+ G PN +
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVVT 418
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L+ GLC+ G+L+ A ++DE + +P+ TY+TL+ G C++G++E AF
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+RM E I D V + LIS L ++G+ + K+L M G P +Y ++ K
Sbjct: 335 KRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKK 394
Query: 317 KRFPEAKELVGRMICERMSPSFVS 340
+L+ M + P+ V+
Sbjct: 395 GDVWTGSKLLKEMQRDGYLPNVVT 418
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 115/220 (52%), Gaps = 1/220 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P TFN +L LL+ + + + ++ + K V++D I++KG CE G L+ F V
Sbjct: 128 PGSNTFNNLLILLIKSNFFEKAWRVF-NETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEV 186
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + + PNV Y+TL+ G C+ G++E L +M + A+ T+ +LI+G K
Sbjct: 187 LGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFK 246
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++G++L E+MK G PN +Y ++ + + A EL M ++ + V+
Sbjct: 247 MGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVT 306
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI GLC ++ V + + ++ +M + G P + + ++
Sbjct: 307 YNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLI 346
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 121/261 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G I + + + M + + T+ +++N L + +Y G+ +
Sbjct: 213 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 272
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ C +G L AF + DE ++ NV TY+TL+ GLC++ V EA L+ RM+
Sbjct: 273 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 332
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G+ + +++N LI G G +++ L +MK G P+ A+Y ++ G + K
Sbjct: 333 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAG 392
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
++V M +SPS V+Y L+ L +E + M + G V + ++ ++
Sbjct: 393 VTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIH 452
Query: 382 CVTFGKDNRNRVYVTETVDSL 402
+ D + + +++D +
Sbjct: 453 GLCVVGDMKEASKLFKSLDEM 473
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 2/248 (0%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N Y +I L Q +R E +M R+K + L + YN + G + KA
Sbjct: 303 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS--PNLISYNTLIDGYCSIGNLDKASS 360
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
M S PS+ T+N+++ AK + + G+ IL+ L
Sbjct: 361 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV 420
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ N+E AF + K ++ Y L+HGLC G+++EA L + ++ + + V
Sbjct: 421 RSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDV 480
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+N +I G K+G ++LL+ M G PN ASY + L +++ EA+ L+ M
Sbjct: 481 IYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDM 540
Query: 330 ICERMSPS 337
I + PS
Sbjct: 541 IELGLKPS 548
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P++ ++N +++ S + ++ G NIL+ G E N +
Sbjct: 337 PNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDM 396
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ E + P+ TY+ LM L N+E+AF + ME G+ AD + +LI GL
Sbjct: 397 VREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCV 456
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++E KL + + PN Y ++YG + A L+ M M P+ S
Sbjct: 457 VGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVAS 516
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
Y I LC + + + +LK M++ G P + +W I
Sbjct: 517 YNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + K E L M P+V + +++ + ++ +L V +
Sbjct: 177 VGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYT 236
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+L+ G + G + + ++ PNV TY++++ C G + AF L + M
Sbjct: 237 YTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR 296
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ + VT+N LI GL ++ +V E +L+ RMK G PN SY ++ G
Sbjct: 297 ERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLD 356
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A L +M SPS +Y LI G K V ++++M +G P
Sbjct: 357 KASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSP 407
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 131/275 (47%), Gaps = 2/275 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+P+ + ++++ L +AK+ + D+++R++ + +C + + +VI Y AGR+ A
Sbjct: 250 SPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCK-AGRMEDA 308
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ DM P+ T+N+++N A +Y D + L+ G
Sbjct: 309 LSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDG 368
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-IDA 266
C G L+ A + E + + +PNV T+S ++H LC++ EA G L + I
Sbjct: 369 YCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAP 428
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
T +N +I L K G+VEE ++ M+ KGC+P+ +Y ++ G K R PEA L
Sbjct: 429 QTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLF 488
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+M+ P ++ I + + +VD ++
Sbjct: 489 HKMVETGCRPDKITVNSFISCVLKAGMPNEVDQIM 523
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 136/311 (43%), Gaps = 9/311 (2%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ + +Q + + Y P+ ++ + A DA ++ K + R + + YN +
Sbjct: 131 LKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVTLLT--KASQFGRRIEPYAYNNL 188
Query: 135 KIYGNMAGRISKAI---ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
GR A+ E+ Y+ P +FN+V+ + + + + +
Sbjct: 189 LNLLIARGRAQDAVALFESWIQDGLYS--PDGWSFNVVIKGVCRVGNFQKALELVERMTE 246
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEKGNVE 250
G D NIL+ GLC + +L + C PNV TY++++ G C+ G +E
Sbjct: 247 FGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRME 306
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A + M G +TVT+N+LI+G K +E +++ ++ + C P+ ++ ++
Sbjct: 307 DALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLI 366
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM-VQQGF 369
G + +A + M + P+ ++ +IH LC Q + L+++ ++
Sbjct: 367 DGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADI 426
Query: 370 VPRMGMWREIV 380
P+ ++ ++
Sbjct: 427 APQTFIYNPVI 437
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 7/220 (3%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
+ D +SV + + + R PN Y ++IN +A ++ M R + + C
Sbjct: 305 MEDALSVYNDMLESGTR----PNTVTYNVLINGYGKALDMESAVR-MYRQLILRRCPPDV 359
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
F ++I Y G++ A+ +M ++ P+V TF+++++ L E G
Sbjct: 360 VTFSSLIDGYCR-CGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLR 418
Query: 188 SA-AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ + N ++ LC+ G +E A ++ + ++ C P+ TY+ L+ G C K
Sbjct: 419 ELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMK 478
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
G + EA L +M G D +T N IS + K G E
Sbjct: 479 GRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNE 518
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 37/181 (20%)
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTF------------ 271
P + P+ ++YS ++ LC G +A L ++M + G D V F
Sbjct: 103 PPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGL 162
Query: 272 -----------------------NILISGLRKQGKVEEGMKLLERMKGKGCY-PNSASYQ 307
N L++ L +G+ ++ + L E G Y P+ S+
Sbjct: 163 LDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFN 222
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
V+ G+ F +A ELV RM SP +++ L+ GLC K V +L+++ +
Sbjct: 223 VVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRD 282
Query: 368 G 368
G
Sbjct: 283 G 283
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 137/291 (47%), Gaps = 2/291 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ ++IN L R D + K+ KL D + + + G+I +A+
Sbjct: 78 PDVYTLAIVINSLCHLNRVDFAFSALA--KILKLGHQPDATTFTTLIRGLCVEGKIGEAL 135
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M P+V T+ ++N L + E I++ G+ + N L+ GL
Sbjct: 136 HLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGL 195
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ + +++E P+V T +T++ LC++G V EA +++ M G++ +
Sbjct: 196 CKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNV 255
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N L+ G + +V+ +K+ + M K C N SY ++ G + +A L
Sbjct: 256 VTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEE 315
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
M + ++P+ V+Y LIHGLC+ ++D + +MV +G +P + +R +
Sbjct: 316 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 366
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 4/256 (1%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A+ T M PS FN +L + K + + + G+ D L I
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ LC ++ AF L + K +P+ T++TL+ GLC +G + EA L ++M EG
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+ LI+GL K +V E + M KG PN +Y +++GL +
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
L+ M+ ++ P + ++ LC + +V + V+ M+ +G P + + ++
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD-- 263
Query: 384 TFGKDNRNRVYVTETV 399
G RN V V V
Sbjct: 264 --GHCLRNEVDVAVKV 277
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 139/303 (45%), Gaps = 10/303 (3%)
Query: 74 VISVLNQYSK--RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
V N +S+ K +PN Y +I+ L + + + +M + K+ D F
Sbjct: 166 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI--MPDVFTL 223
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ---GIYTS 188
N + G +++A + + M P+V T+N +++ L E+ ++ +
Sbjct: 224 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD---GHCLRNEVDVAVKVFDT 280
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ N L+ G C+ +++ A Y+ +E +Q PN TY+TL+HGLC G
Sbjct: 281 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 340
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+++A L M + G D VT+ L L K +++ M LL+ ++G P+ Y
Sbjct: 341 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 400
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+L G+ +A++L + + + P+ +Y +IHGLC Q L+ + + +M + G
Sbjct: 401 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 460
Query: 369 FVP 371
P
Sbjct: 461 CSP 463
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 1/227 (0%)
Query: 146 KAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
K + TL +M + P+V F+ V++ L + + K GVE D L
Sbjct: 690 KHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTAL 749
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C ++ A V D + C PNVR+Y+ L++G C+ +++A GLLE+M +G+
Sbjct: 750 MDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGL 809
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
ADTVT+N LI GL G+++ + L M G P+ +Y+ +L L EA
Sbjct: 810 IADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMV 869
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ + + + Y I G+C +E + + +G P
Sbjct: 870 LLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQP 916
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 106/227 (46%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S+ P V T +V+N L KLG + DA L++GLC G
Sbjct: 71 MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 130
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
+ A ++ D+ + +PNV TY TL++GLC+ V EAF + M ++GI + VT+N
Sbjct: 131 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 190
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI GL K + + L+ M P+ + V+ L + EA ++V MI
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P+ V+Y L+ G C + V+ V MV + V + + ++
Sbjct: 251 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 297
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE--- 210
M S+ P V T N+++N + G + KLG + D L+ GLC+
Sbjct: 607 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMIT 666
Query: 211 ----------NGNLEA---------AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
N + A +L+E PNV +ST++ LC++G +
Sbjct: 667 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAI 726
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A +++ M G++ D VT+ L+ G + +++E +K+ + M KGC PN SY ++
Sbjct: 727 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 786
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G +R +A L+ +M + + V+Y LIHGLC+ ++ + +MV G +P
Sbjct: 787 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 846
Query: 372 RMGMWR 377
+ +R
Sbjct: 847 DLVTYR 852
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 134/300 (44%), Gaps = 14/300 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG---- 142
+ P+ +T +I L + + ++ +GF NV+ YG +
Sbjct: 111 HQPDATTFTTLIRGLCVEGKIGEALHLFDKM-------IGEGFQPNVVT-YGTLINGLCK 162
Query: 143 --RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
++++A +M + P++ T+N +++ L + + + + D
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 222
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
LN ++ LC+ G + A V+D + EPNV TY+ LM G C + V+ A + + M
Sbjct: 223 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 282
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ A+ +++N LI+G K V++ M L E M + PN+ +Y +++GL R
Sbjct: 283 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 342
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A L M+ P V+Y+ L LC + ++ +LK + + P + ++ I+
Sbjct: 343 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 402
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 130/280 (46%), Gaps = 11/280 (3%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQ----AKRFDA 109
D + ++ NL + V ++LN+ K PN +++ +++ L + A D
Sbjct: 672 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK-IMPNVVVFSTVVDALCKEGMIAIAHDV 730
Query: 110 IEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLV 169
+ D+M + VE D Y + + + +A++ M C P+V+++N++
Sbjct: 731 V-DMMIKRGVEP-----DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 784
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
+N + + G+ + G+ D N L+ GLC G L+ A + E
Sbjct: 785 INGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ 844
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
P++ TY L+ LC+ ++ EA LL+ +E +DAD + +NI I G+ + G++E
Sbjct: 845 IPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARD 904
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
L + KG P+ +Y +++GL + EA +L +M
Sbjct: 905 LFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA+ +M P+ T+N +++ L + ++ G D
Sbjct: 306 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 365
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L LC+N +L+ A +L N +P+++ Y+T++ G+C G +E+A L + S+G
Sbjct: 366 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 425
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + T+NI+I GL KQG + E KL M GC PN +Y + G L
Sbjct: 426 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTI 485
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
EL+ M+ S + L+ L + L + V +L K
Sbjct: 486 ELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 525
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 132/283 (46%), Gaps = 18/283 (6%)
Query: 76 SVLNQYSKRKDYNPNEALYTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+VL+ ++ + +YTL +IN +R ++ K+ KL GF +V
Sbjct: 599 TVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLA--KLLKL-----GFQPDV 651
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ YG + + K I + P + T+N +++ L + + + +
Sbjct: 652 VT-YGTLMNGLCKMI-------TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 703
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ + + ++ LC+ G + A V+D K+ EP+V TY+ LM G C + ++EA
Sbjct: 704 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 763
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+ + M +G + ++NILI+G + ++++ M LLE+M +G ++ +Y +++GL
Sbjct: 764 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 823
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC-NQKLVE 355
R A L M+ P V+Y+ L+ LC N L E
Sbjct: 824 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE 866
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 120/255 (47%), Gaps = 2/255 (0%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN + + + A++ M +C +V ++N ++N + + ++ +
Sbjct: 258 YNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMS 317
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ + + N L+ GLC G L+ A + E + P++ TY TL LC+ +++
Sbjct: 318 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 377
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A LL+ +E D D + ++ G+ + G++E+ L + KG PN +Y ++
Sbjct: 378 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 437
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG-LCNQKLVEDVDWVLKKMVQQGF 369
+GL + EA +L M SP+ +Y + G L N + + ++ +L++M+ +GF
Sbjct: 438 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIE-LLEEMLARGF 496
Query: 370 VPRMGMWREIVGCVT 384
+ +VG ++
Sbjct: 497 SVDVSTTTLLVGMLS 511
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 4/177 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISKA 147
PN Y ++IN Q +R D +++++ ++ L +D YN + I+G GR+ A
Sbjct: 776 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGL--IADTVTYNTL-IHGLCHVGRLQHA 832
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
I +M + P + T+ ++L+ L E + + ++ D NI + G
Sbjct: 833 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDG 892
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+C G LEAA + + +P+VRTY+ ++HGLC++G ++EA L +M+ I
Sbjct: 893 MCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDI 949
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 11/223 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
R++ PN Y +I+ L R DAI + + ++ D Y + Y
Sbjct: 318 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI---PDLVTYRTLSDYLCKNR 374
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ KA+ L + N P ++ + +L+ + A + + ++++ + G++ + N
Sbjct: 375 HLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYN 434
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ GLC+ G L A + E K C PN TY+ + G LLE M +
Sbjct: 435 IMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 494
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G D T +L+ L G L + +K C P+S+S
Sbjct: 495 GFSVDVSTTTLLVGMLSDDG-------LDQSVKQILCKPSSSS 530
>gi|255566203|ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536657|gb|EEF38299.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1072
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 2/270 (0%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
Y +I + G ++ +AI+ +M P + L+ L A E + S
Sbjct: 794 YLLISLCGKKGRKVDEAIKIFHEMIRTRYIPDREVVGTYLSCLCEAGRLSEARKSTDSLC 853
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
++G I ++ ++ LC +G LE A +LDE + + TY TL+HGL KG E
Sbjct: 854 RIGYTI-PLSYSLYIRALCRSGRLEEALSLLDEVGTERSTLDQYTYGTLVHGLLRKGRQE 912
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA +E M+ GI+ + LI K+ ++E+ M++ E+M+ GC P +Y ++
Sbjct: 913 EALAKIESMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQDGCEPTVVTYSALI 972
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
G ++ +R +A ++ + + P F +Y I LC E+ +L +M++ G V
Sbjct: 973 RGYMNMERADDAWSVLNHLKLKGPKPDFKTYSMFISCLCKAGKSEEALQLLSRMLEDGIV 1032
Query: 371 PRMGMWREI-VGCVTFGKDNRNRVYVTETV 399
P +R + G GK++ R + + +
Sbjct: 1033 PSTINFRTVFFGLNCEGKNDLARTVMQQKL 1062
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 138/347 (39%), Gaps = 19/347 (5%)
Query: 53 KDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKD--------------YNPNEALYTLII 98
KDW E L+ + P V+ +L+ S + Y + Y + +
Sbjct: 667 KDWCIMQEALEKCTLQFTPGLVLEILHNCSMHGNAALKFFSWLGVQTGYCHTKETYNMAM 726
Query: 99 NKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYN 158
+ K F + + ++ K C + + +I YG G +++T +M
Sbjct: 727 KISGREKDFKHMRSLFYEMR-RKGCLITPDTWAIMIMQYGR-TGLTEISLKTFTEMKDNG 784
Query: 159 CWPSVKTFNLVLNLLVSAK--LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
P+ T+ +L L K E I+ + D + L LCE G L
Sbjct: 785 YIPNDSTYKYLLISLCGKKGRKVDEAIKIFHEMIRTRYIPDREVVGTYLSCLCEAGRLSE 844
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
A D + + +YS + LC G +EEA LL+ + +E D T+ L+
Sbjct: 845 ARKSTDSLCRIGYTIPL-SYSLYIRALCRSGRLEEALSLLDEVGTERSTLDQYTYGTLVH 903
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
GL ++G+ EE + +E MK G P Y ++ +K+ +A ++ +M + P
Sbjct: 904 GLLRKGRQEEALAKIESMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQDGCEP 963
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+ V+Y LI G N + +D VL + +G P + + C+
Sbjct: 964 TVVTYSALIRGYMNMERADDAWSVLNHLKLKGPKPDFKTYSMFISCL 1010
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 7/232 (3%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR--FSDGFFYNVIKIYGNMA 141
R Y P+ + ++ L +A R R + LCR ++ Y++ +
Sbjct: 819 RTRYIPDREVVGTYLSCLCEAGRLSE-----ARKSTDSLCRIGYTIPLSYSLYIRALCRS 873
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ +A+ L ++ + T+ +++ L+ E S + G+
Sbjct: 874 GRLEEALSLLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEALAKIESMKEAGINPTVHVY 933
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ + +E A + ++ + CEP V TYS L+ G ++A+ +L ++
Sbjct: 934 TSLIVHFFKEKQIEKAMQIFEKMQQDGCEPTVVTYSALIRGYMNMERADDAWSVLNHLKL 993
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+G D T+++ IS L K GK EE ++LL RM G P++ +++ V +GL
Sbjct: 994 KGPKPDFKTYSMFISCLCKAGKSEEALQLLSRMLEDGIVPSTINFRTVFFGL 1045
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 124/269 (46%), Gaps = 5/269 (1%)
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWP 161
+AK F ++D+++ ++ + C + +I +G A I KA+ M + C P
Sbjct: 221 GEAKEFKVVDDLVEEME-KNSCEKDIKTWSILISQFGK-AKLIGKALLFFEKMKTSGCEP 278
Query: 162 SVKTFNLVLNLLVSAKLYGEIQ-GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
K + ++++ L +A GE+ Y + + +D ILL + ++G++ A V
Sbjct: 279 DEKIYKMMVHSLCNAG-KGEVALAFYKEMVQKDMRLDLSLYKILLISMAKSGDVGAVHLV 337
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
++ + + P ++ C G + EA L+ ++++ I D L+ GL +
Sbjct: 338 ANDMSRLSQIPEHDVNVCILKSFCVAGKIREALELIRDLKNKDILIDYEYLGTLVKGLCR 397
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
++ + ++++E MK + ++ Y ++ G L KK +A EL RM + P +
Sbjct: 398 GDRITDAVEIVEIMKKRNLI-DAKIYGIIINGYLRKKDLSKAIELFQRMKESGIQPITST 456
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
Y +L+ L N + + +M+++G
Sbjct: 457 YTELMQCLFNLNQYDKGFELFNEMLERGI 485
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 117/276 (42%), Gaps = 3/276 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+E +Y ++++ L A + + + + V+K R D Y ++ I +G +
Sbjct: 278 PDEKIYKMMVHSLCNAGKGEVALAFYKEM-VQKDMRL-DLSLYKILLISMAKSGDVGAVH 335
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
DM + P +L A E + + ID L L+KGL
Sbjct: 336 LVANDMSRLSQIPEHDVNVCILKSFCVAGKIREALELIRDLKNKDILIDYEYLGTLVKGL 395
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C + A +++ K+N + + Y +++G K ++ +A L +RM+ GI T
Sbjct: 396 CRGDRITDAVEIVEIMKKRNL-IDAKIYGIIINGYLRKKDLSKAIELFQRMKESGIQPIT 454
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+ L+ L + ++G +L M +G +S + ++ + + EA E+
Sbjct: 455 STYTELMQCLFNLNQYDKGFELFNEMLERGIRVDSVATMAIVAAHVRQNHISEAWEVFNT 514
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
M + +P++ SY I LC +++ VL KM
Sbjct: 515 MKDKGANPTWKSYSIFIKELCRVSRTDEILKVLYKM 550
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 4/191 (2%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKAIETLF 152
Y+L I L ++ R + ++ + E+ D + Y + ++G + GR +A+ +
Sbjct: 863 YSLYIRALCRSGRLEEALSLLDEVGTER--STLDQYTYGTL-VHGLLRKGRQEEALAKIE 919
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M P+V + ++ K + I+ + G E + L++G
Sbjct: 920 SMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQDGCEPTVVTYSALIRGYMNME 979
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+ A+ VL+ + +P+ +TYS + LC+ G EEA LL RM +GI T+ F
Sbjct: 980 RADDAWSVLNHLKLKGPKPDFKTYSMFISCLCKAGKSEEALQLLSRMLEDGIVPSTINFR 1039
Query: 273 ILISGLRKQGK 283
+ GL +GK
Sbjct: 1040 TVFFGLNCEGK 1050
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 106 RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR-ISKAIETLFDMPSYNCWPSVK 164
R D I D ++ +++ K D Y +I I G + + +SKAIE M P
Sbjct: 397 RGDRITDAVEIVEIMKKRNLIDAKIYGII-INGYLRKKDLSKAIELFQRMKESGIQPITS 455
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+ ++ L + Y + ++ + G+ +D+ ++ ++ A+ V +
Sbjct: 456 TYTELMQCLFNLNQYDKGFELFNEMLERGIRVDSVATMAIVAAHVRQNHISEAWEVFNTM 515
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ P ++YS + LC +E +L +M++ I + FN+ I+ + K+G+V
Sbjct: 516 KDKGANPTWKSYSIFIKELCRVSRTDEILKVLYKMQASKIFINNDIFNLAIAFMEKKGEV 575
Query: 285 EEGMKL 290
+ K+
Sbjct: 576 DNVQKV 581
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/257 (18%), Positives = 96/257 (37%), Gaps = 36/257 (14%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
+ KT+ +L + AK + + + K E D +IL+ + + A
Sbjct: 209 TTKTYYTMLYIAGEAKEFKVVDDLVEEMEKNSCEKDIKTWSILISQFGKAKLIGKALLFF 268
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
++ CEP+ + Y ++H LC G E A + M + + D + IL+ + K
Sbjct: 269 EKMKTSGCEPDEKIYKMMVHSLCNAGKGEVALAFYKEMVQKDMRLDLSLYKILLISMAKS 328
Query: 282 -----------------------------------GKVEEGMKLLERMKGKGCYPNSASY 306
GK+ E ++L+ +K K +
Sbjct: 329 GDVGAVHLVANDMSRLSQIPEHDVNVCILKSFCVAGKIREALELIRDLKNKDILIDYEYL 388
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL R +A E+V M + + + Y +I+G +K + + ++M +
Sbjct: 389 GTLVKGLCRGDRITDAVEIVEIMKKRNLIDAKI-YGIIINGYLRKKDLSKAIELFQRMKE 447
Query: 367 QGFVPRMGMWREIVGCV 383
G P + E++ C+
Sbjct: 448 SGIQPITSTYTELMQCL 464
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 35/228 (15%)
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
A K G+ + N LL GLCE GN+E F V E ++ + +Y+TL+ G C+ G
Sbjct: 478 ADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGK 537
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+EEAF L E+M +G DT T+N L+ GL +GK+++ ++L K G PN +Y
Sbjct: 538 IEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYAL 597
Query: 309 VLYGLLDKKR-----------------------------------FPEAKELVGRMICER 333
+L G + R F EA +L M
Sbjct: 598 MLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSN 657
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ P+ +Y +IHG+C LVE+ + ++M +G +P + + ++G
Sbjct: 658 IHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIG 705
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 140/318 (44%), Gaps = 46/318 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NP+ Y +++N L + ++FD ++ + + + F +N + + G + A
Sbjct: 308 NPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFS--PNEFVFNALIDGYSRKGNMDDA 365
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI--YTSAAKLGVEIDACC----- 200
+ DM P+ T N +L + + + Y + L V DAC
Sbjct: 366 LRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHL 425
Query: 201 ----------------------------LNILLKGLCENG-NLEAAFYVLDEFPKQNCEP 231
L +L+ GLC+ G +LEA K+
Sbjct: 426 LCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAA 485
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N T + L++GLCE+GN+EE F + + M G+ D +++N LI G K GK+EE KL
Sbjct: 486 NTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLK 545
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER----MSPSFVSYKKLIHG 347
E+M +G P++ +Y ++ GL DK + + VGR++ E + P+ +Y ++ G
Sbjct: 546 EKMMKQGFKPDTYTYNFLMKGLADKGKMDD----VGRVLHEAKDHGVVPNIYTYALMLEG 601
Query: 348 LCNQKLVEDVDWVLKKMV 365
CN +++ + K+V
Sbjct: 602 YCNADRIDNAVSLFNKLV 619
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 104/231 (45%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D + YN + G++ L + + P++ T+ L+L +A ++
Sbjct: 556 DTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLF 615
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
VE+ NIL+ + GN AF + D N P + TYS+++HG+C
Sbjct: 616 NKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCN 675
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
VEEA G+ E M +EG+ + + LI G K G++++ +L+ M PN +Y
Sbjct: 676 DLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITY 735
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
++ G EA +L+ MI +SP V+Y L G C + +E+
Sbjct: 736 TIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEET 786
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%)
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A +T S +PS+K+ N +++ LV + + ++ + + GV ID +
Sbjct: 190 AFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAIN 249
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
C+ G ++ A + + + PNV TY+ L+ GLC+ G +EEA RM ++
Sbjct: 250 AYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNP 309
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
VT+ IL++GL K K +E +L M KG PN + ++ G K +A +
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVR 369
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
M + + P+ V++ L+ G C +E + VL+ ++
Sbjct: 370 DDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSN 410
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
K G + D N L+KGL + G ++ VL E PN+ TY+ ++ G C ++
Sbjct: 550 KQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRID 609
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A L ++ ++ V +NILI+ K G E KL + M+ +P +Y ++
Sbjct: 610 NAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSII 669
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+G+ EAK + M E + P+ Y LI G C ++ ++ +L++M
Sbjct: 670 HGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQ 729
Query: 371 P 371
P
Sbjct: 730 P 730
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 12/234 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y L++ A R D + ++ K+ YN++ + AG ++A
Sbjct: 590 PNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVEL--SYVVYNILIAAHSKAGNFTEAF 647
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M S N P++ T++ +++ + L E +GI+ G+ + C L+ G
Sbjct: 648 KLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGY 707
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G ++ +L E +PN TY+ ++ G C+ GN +EA LL M + GI DT
Sbjct: 708 CKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDT 767
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
VT+ +L G K+ ++E E ++G P +E+ Y L K P +
Sbjct: 768 VTYTVLQKGYCKENELE------ETLQGDTAVP----LEEITYTTLVDKLHPHS 811
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ L ++ L +F V D + +V TY+T ++ C+ G ++EA GL +M
Sbjct: 210 NFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGE 269
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ + VT+N LI GL K G++EE + RM P+ +Y ++ GL+ ++F E
Sbjct: 270 GGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDE 329
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A ++ M + SP+ + LI G + ++D V M +G P
Sbjct: 330 ANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKP 379
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 44/271 (16%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+GR+ +A+ M PS+ T+ +++N LV + + E + G +
Sbjct: 289 SGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFV 348
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G GN++ A V D+ + +PN T++TL+ G C +E+A +LE +
Sbjct: 349 FNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLL 408
Query: 261 SE--GIDADTVTF---------------------------------NILISGLRKQGKVE 285
S ++ D ++ +L+ GL K GK
Sbjct: 409 SNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHL 468
Query: 286 EGMKLLERMKG-KGCYPNSASYQEVLYGLLDK----KRFPEAKELVGRMICERMSPSFVS 340
E + L R+ KG N+ + +LYGL ++ + FP KE+V R + +S
Sbjct: 469 EAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVER----GLVLDGIS 524
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LI G C +E+ + +KM++QGF P
Sbjct: 525 YNTLIFGCCKSGKIEEAFKLKEKMMKQGFKP 555
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 92/183 (50%), Gaps = 3/183 (1%)
Query: 201 LNILLKGLC---ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
L++L+ LC ++ AF F + P++++ + LM L + + ++F + +
Sbjct: 171 LDLLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFD 230
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M G+ D T+ I+ K GK++E + L +M G PN +Y ++ GL
Sbjct: 231 AMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSG 290
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
R EA GRM+ +++PS V+Y L++GL + ++ + VL +M +GF P ++
Sbjct: 291 RLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFN 350
Query: 378 EIV 380
++
Sbjct: 351 ALI 353
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 103/245 (42%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
DG YN + +G+I +A + M P T+N ++ L ++ +
Sbjct: 521 DGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVL 580
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
A GV + ++L+G C ++ A + ++ E + Y+ L+ +
Sbjct: 581 HEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKA 640
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
GN EAF L + M S I T++ +I G+ VEE + E M+ +G PN Y
Sbjct: 641 GNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCY 700
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ G + + + ++ M + P+ ++Y +I G C ++ +L +M+
Sbjct: 701 TALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIA 760
Query: 367 QGFVP 371
G P
Sbjct: 761 NGISP 765
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 97/203 (47%)
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
V T+ +N E G++ + GV + N L+ GLC++G LE A
Sbjct: 241 VYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKG 300
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
+ P++ TY L++GL + +EA +L M S+G + FN LI G ++G
Sbjct: 301 RMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKG 360
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+++ +++ + M KG PN+ ++ +L G + +A++++ ++ +S + +
Sbjct: 361 NMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACS 420
Query: 343 KLIHGLCNQKLVEDVDWVLKKMV 365
++H LC + ++K ++
Sbjct: 421 YVLHLLCKSSKFDSALKIVKALL 443
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 38/309 (12%)
Query: 131 YN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN VI G K +E M S P TFN +L + L+ + ++++
Sbjct: 263 YNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAM 322
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G++ D N LL +C+ G ++ AF ++ E P +N PNV TYST++ G + G +
Sbjct: 323 VDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRL 382
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
++A + M+ G+ D V++N L+S K G+ E+ + + + M+ G + +Y +
Sbjct: 383 DDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNAL 442
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVS----------------------------- 340
L G + R+ E + + M R+SP+ ++
Sbjct: 443 LAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGL 502
Query: 341 ------YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVY 394
Y LI LC LVE +L +M ++G P + + I+ FG+ +
Sbjct: 503 KADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDA--FGRSASAQCV 560
Query: 395 VTETVDSLA 403
V ++ ++ A
Sbjct: 561 VDDSGETTA 569
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 122/259 (47%), Gaps = 4/259 (1%)
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL-YGEIQGIYTS 188
F +I YG +G ++AI+ M S P++ T+N V++ + + ++ I+
Sbjct: 228 FSALISAYGR-SGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDG 286
Query: 189 AAKLGVEIDACCLNILLKGLCENGNL-EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
GV+ D N LL +C G L EAA + + + ++ TY+TL+ +C+ G
Sbjct: 287 MLSNGVQPDRITFNSLL-AVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGG 345
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ AF ++ M ++ I + VT++ +I G K G++++ + + MK G + SY
Sbjct: 346 QMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYN 405
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+L RF +A ++ M + V+Y L+ G Q ++V V ++M +
Sbjct: 406 TLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRG 465
Query: 368 GFVPRMGMWREIVGCVTFG 386
P + + ++ + G
Sbjct: 466 RVSPNLLTYSTLIDVYSKG 484
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 35/219 (15%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F YN + G++ A E + +MP+ N P+V T++ +++ + ++
Sbjct: 330 DIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMF 389
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAF---------------------------- 218
LGV +D N LL + G E A
Sbjct: 390 NEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQ 449
Query: 219 -------YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
V +E + PN+ TYSTL+ + G +EA + + G+ AD V +
Sbjct: 450 YRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLY 509
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+ LI L K G VE + LL+ M +G PN +Y ++
Sbjct: 510 SALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSII 548
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 4/202 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGR 143
K+ PN Y+ +I+ A+ R D ++ +K L D YN ++ +Y + GR
Sbjct: 360 KNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKF--LGVGLDRVSYNTLLSVYAKL-GR 416
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A++ +M + V T+N +L Y E++ ++ + V + +
Sbjct: 417 FEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYST 476
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ + G + A V EF + + +V YS L+ LC+ G VE + LL+ M EG
Sbjct: 477 LIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEG 536
Query: 264 IDADTVTFNILISGLRKQGKVE 285
I + VT+N +I + +
Sbjct: 537 IRPNVVTYNSIIDAFGRSASAQ 558
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 3/177 (1%)
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ ++ +A K G + L+ +G A V D PN+ TY+ ++
Sbjct: 210 KAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDA 269
Query: 243 LCEKGNVE--EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
C KG VE + + + M S G+ D +TFN L++ + G E +L M KG
Sbjct: 270 -CGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGID 328
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
+ +Y +L + + A E++ M + + P+ V+Y +I G ++D
Sbjct: 329 QDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDA 385
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
S ++ L G VE A + + EG F+ LIS + G E +K+ + MK
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKS 253
Query: 297 KGCYPNSASYQEVLYGLLDKK-RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
G PN +Y V+ F + E+ M+ + P +++ L+ L E
Sbjct: 254 NGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWE 313
Query: 356 DVDWVLKKMVQQG 368
+ MV +G
Sbjct: 314 AARRLFSAMVDKG 326
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 7/239 (2%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P T N++LN L + GE + + G D L+KGLC + A +
Sbjct: 129 PDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALL 188
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE----GIDADTV--TFNIL 274
K C PN TY TLM GLC GN+ A L + M ++ GI+ V +++I+
Sbjct: 189 FTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSII 248
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I L K + +E L E MK +G P SY +++G ++ EAK L M+ + +
Sbjct: 249 IDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGV 308
Query: 335 SPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNR 392
P+ V++ LI LC + V + +L+ M+Q+G VP + + ++ G G N R
Sbjct: 309 QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAR 367
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 117/249 (46%), Gaps = 8/249 (3%)
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
GN+ ++A + M N P + +F +L+ L K Y ++ +Y G+ D
Sbjct: 73 GNITA--TQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPD 130
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
C LNILL LC + V+ ++ P++ TY+TL+ GLC + + +A L
Sbjct: 131 CCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFT 190
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM------KGKGCYPNSASYQEVLY 311
RM+ G + +T+ L+ GL + G + +KL + M G P SY ++
Sbjct: 191 RMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIID 250
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L +R EA++L M + M+P+ +SY LIHG C E+ + +MV QG P
Sbjct: 251 ALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQP 310
Query: 372 RMGMWREIV 380
+ + ++
Sbjct: 311 NVVTFNVLI 319
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 118/250 (47%), Gaps = 12/250 (4%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYTSAAKL 192
M RISKA M C P+ T+ ++ N+ ++ KL+ E+ ++
Sbjct: 178 MEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEM---LNDSSLY 234
Query: 193 GVEIDACCLN--ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
G+ ++ I++ LC++ + A + +E Q P V +Y++L+HG C G E
Sbjct: 235 GINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWE 294
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
EA L M ++G+ + VTFN+LI L K+GKV E LLE M +G PN +Y ++
Sbjct: 295 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 354
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
G A+EL M + P + Y LI+G C VE+ + M+Q G
Sbjct: 355 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 414
Query: 371 PRMGMWREIV 380
P + + ++
Sbjct: 415 PDVKTYGALL 424
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 12/291 (4%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGNMA 141
++ P Y++II+ L + +R D D+ + +KV+ G VI I+G
Sbjct: 237 NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQ-------GMTPTVISYTSLIHGFCC 289
Query: 142 GRISKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + + LF +M + P+V TFN+++++L E + + + G+ +
Sbjct: 290 GGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLT 349
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L++G C G+L +A + P + CEP+V Y+ L++G C+ VEEA L M
Sbjct: 350 YNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 409
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G D T+ L++GL + GKV + KL MK G + Y L GL
Sbjct: 410 QVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLF 469
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA EL ++ + + LI GLC +E + +K+ Q+ P
Sbjct: 470 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQP 520
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 51/284 (17%)
Query: 89 PNEALYTLIINKLAQAKRF----DAIEDIMQRIKVEKLCRFS---DGFFYNVIKIYGNMA 141
PN + ++I+ L + + D +E ++QR V L ++ +GF +
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC---------LV 360
Query: 142 GRISKAIETLFDMPSYNC-----------------------------------WPSVKTF 166
G ++ A E MPS C P VKT+
Sbjct: 361 GDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTY 420
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
+L L G+ + ++ G+ D I L GLC+NG L A + ++
Sbjct: 421 GALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKS 480
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
N + ++ ++ L+ GLC+ G +E A+ L E++ E + D VT+NI+I + G+V +
Sbjct: 481 YNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVK 540
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
L ++M+ GC P+ +Y ++ G + K+ + EL+ M+
Sbjct: 541 ANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMV 584
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 16/217 (7%)
Query: 85 KDYNPNEALYTLIIN------KLAQA-KRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
K P+ YT++IN K+ +A K ++ + + +R V+ G F
Sbjct: 376 KGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLF------- 428
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
G++ A + M Y + + + LN L E ++ +++D
Sbjct: 429 --QGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLD 486
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
C N L+ GLC+ G LE A+ + ++ P++ +P+V TY+ ++H C G V +A L +
Sbjct: 487 IECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQ 546
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
+ME G D +T+ LI G + K+E+ ++LL M
Sbjct: 547 KMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 583
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 115/220 (52%), Gaps = 1/220 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P TFN +L LL+ + + + ++ + K V++D I++KG CE G L+ F V
Sbjct: 115 PGSNTFNNLLILLIKSNFFEKAWRVF-NETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEV 173
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + + PNV Y+TL+ G C+ G++E L +M + A+ T+ +LI+G K
Sbjct: 174 LGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFK 233
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++G++L E+MK G PN +Y ++ + + A EL M ++ + V+
Sbjct: 234 MGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVT 293
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI GLC ++ V + + ++ +M + G P + + ++
Sbjct: 294 YNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLI 333
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 112/239 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G I + + + M + + T+ +++N L + +Y G+ +
Sbjct: 200 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 259
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ C +G L AF + DE ++ NV TY+TL+ GLC++ V EA L+ RM+
Sbjct: 260 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 319
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G+ + +++N LI G G +++ L +MK G P+ A+Y ++ G + K
Sbjct: 320 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAG 379
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++V M +SPS V+Y L+ L +E + M + G V + ++ ++
Sbjct: 380 VTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLI 438
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 2/248 (0%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N Y +I L Q +R E +M R+K + L + YN + G + KA
Sbjct: 290 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS--PNLISYNTLIDGYCSIGNLDKASS 347
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
M S PS+ T+N+++ AK + + G+ IL+ L
Sbjct: 348 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV 407
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+ N+E AF + K ++ Y L+HGLC G+++EA L + ++ + + V
Sbjct: 408 RSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDV 467
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+N +I G K+G ++LL+ M G PN ASY + L +++ EA+ L+ M
Sbjct: 468 IYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDM 527
Query: 330 ICERMSPS 337
I + PS
Sbjct: 528 IELGLKPS 535
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P++ ++N +++ S + ++ G NIL+ G E N +
Sbjct: 324 PNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDM 383
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ E + P+ TY+ LM L N+E+AF + ME G+ AD + +LI GL
Sbjct: 384 VREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCV 443
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++E KL + + PN Y ++YG + A L+ M M P+ S
Sbjct: 444 VGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVAS 503
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
Y I LC + + + +LK M++ G P + +W I
Sbjct: 504 YNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + K E L M P+V + +++ + ++ +L V +
Sbjct: 164 VGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYT 223
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+L+ G + G + + ++ PNV TY++++ C G + AF L + M
Sbjct: 224 YTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR 283
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ + VT+N LI GL ++ +V E +L+ RMK G PN SY ++ G
Sbjct: 284 ERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLD 343
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A L +M SPS +Y LI G K V ++++M +G P
Sbjct: 344 KASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSP 394
>gi|297743432|emb|CBI36299.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 38/288 (13%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
RDP + + + + N + +++LA A RFD IE +++ K R +G
Sbjct: 53 RDPERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEHQKTLPQGR-REG 111
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
F +I +YG AG I +A++T +DM + C +VK+FN L +L + I
Sbjct: 112 FIVRIIMLYGK-AGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAIDLFLRD 170
Query: 189 AA-KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
K G+E+D +NI++K L C+
Sbjct: 171 VPFKFGIELDVFSVNIVIKAL-----------------------------------CDMD 195
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+E+A+ ++ ME G++ D VT+ LIS K + E G L M KGC PN A++
Sbjct: 196 ILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSNRWEVGNGLWNLMVMKGCLPNLATFN 255
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+ L++++R +A L+G M ++P V+Y +I G C +E
Sbjct: 256 VRIQYLVNRRRAWQANSLMGMMEYLGITPDEVTYNLVIKGFCQAGYLE 303
>gi|297837243|ref|XP_002886503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332344|gb|EFH62762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 408
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 172/376 (45%), Gaps = 22/376 (5%)
Query: 16 IQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVI 75
I+SLSSASTI + +P S + S L + + +DP ++
Sbjct: 23 IRSLSSASTILSPDS---KTPLTSKEKS---------------KAALSLLKSEKDPDRIL 64
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+ S D + + ++ + LA+ K F A+ +++ + S+ F + I
Sbjct: 65 EICRAASLTPDCHIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRQDLKSERFAAHAIV 124
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-GV 194
+Y A + ++ D+ + +VK+ N +L + AK Y E + +Y K+ G+
Sbjct: 125 LYAQ-ANMLDHSLRVFRDLEKFEIPRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGI 183
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E D N ++K CE+G+ +++ ++ E ++ +PN ++ ++ G + +E
Sbjct: 184 EPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYSEDKNDEVGK 243
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+L M+ G++ T+NI I L K+ K +E LL+ M G PN+ +Y ++ G
Sbjct: 244 VLVMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIRGFC 303
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
++ F EAK+L M+ P Y LI+ LC E + K+ +++ +VP
Sbjct: 304 NEDDFEEAKKLFKVMVNRGCKPDSECYFTLIYYLCKGGDFETALVLCKESMEKNWVPSFS 363
Query: 375 MWREIVGCVTFGKDNR 390
+ + +V KD++
Sbjct: 364 IMKSLVN--GLAKDSK 377
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 153/335 (45%), Gaps = 39/335 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ +D P+ ++ +++ ++ D + +M V++ D Y ++ G
Sbjct: 357 RSRDVVPDLVCFSSMMSLFTRSGNLD--KALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 414
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
IS+A+ +M C V T+N +L+ L K+ GE ++ + G+ D+ L
Sbjct: 415 MISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLT 474
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG-------------------- 242
IL+ G C+ GNL+ A + + ++ + +V TY+TL+ G
Sbjct: 475 ILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 534
Query: 243 ---------------LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
LC KG++ EAF + + M S+ I + N +I G + G +G
Sbjct: 535 EILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDG 594
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER--MSPSFVSYKKLI 345
LE+M +G P+ SY ++YG + ++ +A LV +M ++ + P +Y ++
Sbjct: 595 EIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSIL 654
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
HG C + +++ + VL+KM+++G P + ++
Sbjct: 655 HGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLI 689
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 133/287 (46%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K ++P Y +IN L + +++ +++ + L D Y + + G
Sbjct: 289 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS--PDSTTYRSLLMEACKKGDA 346
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ DM S + P + F+ +++L + + + S + G+ D IL
Sbjct: 347 VETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 406
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++G C G + A + +E +Q C +V TY+T++HGLC++ + EA L M G+
Sbjct: 407 IQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGL 466
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D+ T ILI G K G ++ M+L ++MK K + +Y +L G AKE
Sbjct: 467 FPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKE 526
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ M+ + + P+ +S+ L++ LC++ + + V +M+ + P
Sbjct: 527 IWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKP 573
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 4/229 (1%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG--VEIDACCLNILLKGLCENGNLE 215
NC + F+L++ V A+ E +T G V IDAC N L+ L G +E
Sbjct: 150 NCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDAC--NALIGSLVRIGWVE 207
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A+ + E + NV T + +++ LC+ G +E+ L ++ +G+ D VT+N LI
Sbjct: 208 LAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLI 267
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
S QG +EE +L+ M KG P +Y V+ GL ++ AKE+ M+ +S
Sbjct: 268 SAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 327
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
P +Y+ L+ C + + + + M + VP + + ++ T
Sbjct: 328 PDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFT 376
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 4/280 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y I++ L + K + + + L F D + ++ G + A+E
Sbjct: 438 YNTILHGLCKRKMLGEADKLFNEMTERGL--FPDSYTLTILIDGHCKLGNLQNAMELFKK 495
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M V T+N +L+ + I+ + +IL+ LC G+
Sbjct: 496 MKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGH 555
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L AF V DE ++ +P V ++++ G C GN + LE+M SEG D +++N
Sbjct: 556 LSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNT 615
Query: 274 LISGLRKQGKVEEGMKLLERMKGK--GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
LI G K+ + + L+++M+ K G P+ +Y +L+G + + EA+ ++ +MI
Sbjct: 616 LIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIE 675
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++P +Y LI+G +Q + + +M+Q+GF P
Sbjct: 676 RGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 4/277 (1%)
Query: 93 LYTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET 150
+YTL ++N L + + + + + ++ + + + D YN + + G + +A E
Sbjct: 225 VYTLNIMVNALCKDGKMEKVGTFLSEVQEKGV--YPDIVTYNTLISAYSSQGLMEEAFEL 282
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
+ MPS P V T+N V+N L Y + ++ + G+ D+ LL C+
Sbjct: 283 MHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 342
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G+ + + ++ P++ +S++M GN+++A ++ G+ D V
Sbjct: 343 KGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 402
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ ILI G ++G + E M L M +GC + +Y +L+GL +K EA +L M
Sbjct: 403 YTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 462
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ P + LI G C +++ + KKM ++
Sbjct: 463 ERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEK 499
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 106/230 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ K L ++ +P + T+N +++ S L E + + G
Sbjct: 239 GKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTY 298
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ GLC++G E A V E + P+ TY +L+ C+KG+ E + M S
Sbjct: 299 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRS 358
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ D V F+ ++S + G +++ + +K G P++ Y ++ G K E
Sbjct: 359 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISE 418
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A L M+ + + V+Y ++HGLC +K++ + D + +M ++G P
Sbjct: 419 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFP 468
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+ N+ ++R + P+ T++I+ + ++ +++K EK + D YN +
Sbjct: 457 LFNEMTERGLF-PDSYTLTILIDGHCKLGNLQNAMELFKKMK-EKRIKL-DVVTYNTLLD 513
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G I A E DM S P+ +F++++N L S E ++ ++
Sbjct: 514 GFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKP 573
Query: 197 DACCLNILLKGLCENGN-----------------------------------LEAAFYVL 221
N ++KG C +GN + AF ++
Sbjct: 574 TVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLV 633
Query: 222 DEFPKQN--CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ ++ P+V TY++++HG C + ++EA +L +M G++ D T+ LI+G
Sbjct: 634 KKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFV 693
Query: 280 KQGKVEEGMKLLERMKGKGCYPN 302
Q + E + + M +G P+
Sbjct: 694 SQDNLTEAFRFHDEMLQRGFSPD 716
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 154/350 (44%), Gaps = 53/350 (15%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
E K+FS++R +D P+ ++ +++ ++ D + +M
Sbjct: 357 VETEKVFSDMRS--------------RDVVPDLVCFSSMMSLFTRSGNLD--KALMYFNS 400
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
V++ D Y ++ G IS A+ +M C V T+N +L+ L K+
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
GE ++ + + D+ L IL+ G C+ GNL+ A + + ++ +V TY+T
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 239 LMHG-----------------------------------LCEKGNVEEAFGLLERMESEG 263
L+ G LC KG++ EAF + + M S+
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I + N +I G + G +G LE+M +G P+ SY ++YG + ++ +A
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 324 ELVGRMICER--MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
LV +M E+ + P +Y ++HG C Q +++ + VL+KM+++G P
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP 690
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 134/287 (46%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K ++P Y +IN L + +++ +++ + L D Y + + G +
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS--PDSTTYRSLLMEACKKGDV 356
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ + DM S + P + F+ +++L + + + S + G+ D IL
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++G C G + A + +E +Q C +V TY+T++HGLC++ + EA L M +
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D+ T ILI G K G ++ M+L ++MK K + +Y +L G AKE
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ M+ + + P+ +SY L++ LC++ + + V +M+ + P
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 4/218 (1%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG--VEIDACCLNILLKGLCENGNLE 215
NC + F+L++ V A+ E +T G V IDAC N L+ L G +E
Sbjct: 160 NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDAC--NALIGSLVRIGWVE 217
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A+ V E + NV T + +++ LC+ G +E+ L +++ +G+ D VT+N LI
Sbjct: 218 LAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI 277
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
S +G +EE +L+ M GKG P +Y V+ GL ++ AKE+ M+ +S
Sbjct: 278 SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
P +Y+ L+ C + V + + V M + VP +
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 4/280 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y I++ L + K + + + L F D + ++ G + A+E
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERAL--FPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M V T+N +L+ + I+ + +IL+ LC G+
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L AF V DE +N +P V ++++ G C GN + LE+M SEG D +++N
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNT 625
Query: 274 LISGLRKQGKVEEGMKLLERMKGK--GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
LI G ++ + + L+++M+ + G P+ +Y +L+G + + EA+ ++ +MI
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++P +Y +I+G +Q + + + +M+Q+GF P
Sbjct: 686 RGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 127/277 (45%), Gaps = 4/277 (1%)
Query: 93 LYTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET 150
+YTL ++N L + + + + + +++ + + + D YN + + G + +A E
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGV--YPDIVTYNTLISAYSSKGLMEEAFEL 292
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
+ MP P V T+N V+N L Y + ++ + G+ D+ LL C+
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G++ V + ++ P++ +S++M GN+++A ++ G+ D V
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ ILI G ++G + M L M +GC + +Y +L+GL +K EA +L M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ P + LI G C +++ + +KM ++
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 1/249 (0%)
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
C +D F +I+ Y A ++ +A E + S S+ N ++ LV
Sbjct: 161 CGSNDSVFDLLIRTYVQ-ARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
G+Y ++ GV I+ LNI++ LC++G +E L + ++ P++ TY+TL+
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
KG +EEAF L+ M +G T+N +I+GL K GK E ++ M G P+
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
S +Y+ +L K E +++ M + P V + ++ ++
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 363 KMVQQGFVP 371
+ + G +P
Sbjct: 400 SVKEAGLIP 408
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ K L + +P + T+N +++ S L E + + G
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ GLC++G E A V E + P+ TY +L+ C+KG+V E + M S
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ D V F+ ++S + G +++ + +K G P++ Y ++ G K
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A L M+ + + V+Y ++HGLC +K++ + D + +M ++ P
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP 478
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 110/263 (41%), Gaps = 40/263 (15%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+ N+ ++R + P+ T++I+ + ++ Q++K EK R D YN +
Sbjct: 467 LFNEMTERALF-PDSYTLTILIDGHCKLGNLQNAMELFQKMK-EKRIRL-DVVTYNTLLD 523
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G I A E DM S P+ ++++++N L S E ++ ++
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 197 DACCLNILLKGLCENGN-----------------------------------LEAAFYVL 221
N ++KG C +GN + AF ++
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 222 DEFPKQN--CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ ++ P+V TY++++HG C + ++EA +L +M G++ D T+ +I+G
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Query: 280 KQGKVEEGMKLLERMKGKGCYPN 302
Q + E ++ + M +G P+
Sbjct: 704 SQDNLTEAFRIHDEMLQRGFSPD 726
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 142/307 (46%), Gaps = 10/307 (3%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLA---QAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+L+ +KR+ + E++ II + +K F+++ + +LC S F +
Sbjct: 121 ILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESL------LYSYRLCDSSPHVFDLL 174
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
K + ++ + A +T M Y P+V++ N L+ L++ Y +
Sbjct: 175 FKTFAHLK-KFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSR 233
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ ++ LN+++ C+ G L+ A V +E PNV +Y+TL+ G C KG + A
Sbjct: 234 IYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAM 293
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
L ME G+ D VTFN L++G K GK++E KL MKG P + +Y ++ G
Sbjct: 294 KLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGY 353
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
L M ++ ++Y LI GLC + + ++++++ ++G VP
Sbjct: 354 SKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNA 413
Query: 374 GMWREIV 380
+ ++
Sbjct: 414 STFSALI 420
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 150/348 (43%), Gaps = 19/348 (5%)
Query: 42 DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYN--PNEALYTLIIN 99
DS H + L K + LK F N D + + KDY P ++
Sbjct: 165 DSSPHVFDLLFKTFAH----LKKFRNASD---------TFCRMKDYGFLPTVESCNAYLS 211
Query: 100 KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
L R D + ++ ++ + + + N++ GR+ KA +M +
Sbjct: 212 SLLNFSRGDIALAFYREMRRSRI--YPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGF 269
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P+V ++N ++ + L + + K GV D N L+ G C+ G L+ A
Sbjct: 270 SPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASK 329
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ E + P TY+ L++G + GN E L E M + AD +T+N LI GL
Sbjct: 330 LFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLC 389
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K+GK ++ L+ + KG PN++++ ++YG +K+ A ++ MI +P
Sbjct: 390 KEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQ 449
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGK 387
+++ L+ C + + +L++M+ + P + E+ C G+
Sbjct: 450 TFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLYEL--CAGLGQ 495
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 130/302 (43%), Gaps = 28/302 (9%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV------IKI 136
+R PN L+I + R D + + + GF NV I
Sbjct: 230 RRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTM-------GFSPNVASYNTLIAG 282
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQGIYTSA 189
Y N G +S A++ M P V TFN ++N L ++KL+GE++G+ S
Sbjct: 283 YCN-KGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSP 341
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ NIL+ G + GN E + +E + + ++ TY+ L+ GLC++G
Sbjct: 342 TTVTY-------NILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKT 394
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
++A L+ ++ +G+ + TF+ LI G Q + E ++ + M P +++ +
Sbjct: 395 KKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRML 454
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L + + + A +L+ M+ +P + +L GL V+ + ++ Q
Sbjct: 455 LSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLYELCAGLGQCGKVKTAMMLCSELEAQRL 514
Query: 370 VP 371
+P
Sbjct: 515 LP 516
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 67 SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILESGYPASLYF 126
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C+ ++ A V D K P+V +Y+TLM+G G+++E F L M
Sbjct: 127 FNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMH 186
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K+++ +L + M KG PN ++ ++ G R
Sbjct: 187 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 246
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + + P ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 247 LALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALI 306
Query: 381 -GCVTFG 386
GC G
Sbjct: 307 DGCCKEG 313
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ ++ R + +++FD + + PSV ++N ++N + E + +
Sbjct: 125 YFFNIL-MHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 183
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE + PN T++TL+ G C+ G
Sbjct: 184 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 243
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L++ M KG P+ +Y
Sbjct: 244 RVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 303
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 304 ALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 363
Query: 368 GFVPRMGMWREIV 380
G P + I+
Sbjct: 364 GLKPDARTYTMII 376
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 105/207 (50%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
S+ FN++++ + Q ++ + K G+ N L+ G G+L+ F +
Sbjct: 122 ASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 181
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+P+V TYS L++GLC++ +++A L + M +G+ + VTF LI G K
Sbjct: 182 KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 241
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+V+ +++ ++M + P+ +Y ++YGL K +A +L+ M + + P ++
Sbjct: 242 NGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 301
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
Y LI G C + ++ K+M+Q+
Sbjct: 302 YTALIDGCCKEGDLDTAFEHRKRMIQE 328
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 103/198 (52%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P V T+++++N L + ++ G+ + L+ G C+NG
Sbjct: 185 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 244
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + + Q+ P++ TY+TL++GLC+KG++++A L++ M +G+ D +T+
Sbjct: 245 VDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTA 304
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+G ++ + +RM + + +Y ++ GL + R +A++++ M+
Sbjct: 305 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 364
Query: 334 MSPSFVSYKKLIHGLCNQ 351
+ P +Y +I+ C +
Sbjct: 365 LKPDARTYTMIINEFCKK 382
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V+ L +G + + GR+ A
Sbjct: 191 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL--VPNGVTFTTLIDGHCKNGRVDLA 248
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N ++ L + + + G++ D L+ G
Sbjct: 249 LEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDG 308
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVR----TYSTLMHGLCEKGNVEEAFGLLERMESEG 263
C+ G+L+ AF E K+ + N+R Y+ L+ GLC++G +A +L M S G
Sbjct: 309 CCKEGDLDTAF----EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 364
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLE 292
+ D T+ ++I+ K+G V +G KLL+
Sbjct: 365 LKPDARTYTMIINEFCKKGDVWKGSKLLK 393
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G + AIE + W T VL L+ K + + G Y + G
Sbjct: 68 SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYQEILECGYPASLYF 127
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
NIL+ C+ GN+ A V D K P+V +Y+TLM G G+++E F L M
Sbjct: 128 FNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMH 187
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ D T+++LI+GL K+ K++E +L + M G P ++ ++ G R
Sbjct: 188 ASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVD 247
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A E+ +M+ + + P ++Y LI+GLC + ++ ++ +M +G P + ++
Sbjct: 248 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLI 307
Query: 381 -GCVTFG 386
GC G
Sbjct: 308 DGCCKEG 314
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 126/253 (49%), Gaps = 2/253 (0%)
Query: 129 FFYNVIKIYGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
+F+N++ G I A +++FD + + PSV ++N +++ + E + +
Sbjct: 126 YFFNILMHRFCKEGNIRVA-QSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKS 184
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
+ GV+ D ++L+ GLC+ ++ A + DE P T++TL+ G C+ G
Sbjct: 185 AMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNG 244
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
V+ A + ++M S+ + D +T+N LI GL K+G +++ L+ M KG P+ +Y
Sbjct: 245 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYT 304
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ G + A E RMI E + V+Y LI GLC + D + +L++M+
Sbjct: 305 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 364
Query: 368 GFVPRMGMWREIV 380
G P + I+
Sbjct: 365 GXKPDTRTYTMII 377
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 109/218 (50%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M + P V T+++++N L E ++ G+ L+ G C+NG
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGR 245
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
++ A + + Q+ P++ TY+TL++GLC+KGB+++A L+ M +G D +T+
Sbjct: 246 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTT 305
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G K+G ++ + +RM + + +Y ++ GL + R +A++++ M+
Sbjct: 306 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 365
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
P +Y +I+ C + V +LK+M + G VP
Sbjct: 366 XKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 403
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 100/206 (48%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
S+ FN++++ Q ++ + K G+ N L+ G G+L+ F +
Sbjct: 124 SLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLK 183
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
+P+V TYS L++GLC++ ++EA L + M G+ VTF LI G K
Sbjct: 184 SAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKN 243
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G+V+ M++ ++M + P+ +Y ++YGL K +A L+ M + P ++Y
Sbjct: 244 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITY 303
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQ 367
LI G C + ++ K+M+Q+
Sbjct: 304 TTLIDGCCKEGDLDTAFEHRKRMIQE 329
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 37/260 (14%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ Y+++IN L + + D ++ + V L G + + GR+ A
Sbjct: 192 QPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGL--VPXGVTFTTLIDGHCKNGRVDLA 249
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E M S + P + T+N L+ G
Sbjct: 250 MEIYKQMLSQSLLPDLITYN-----------------------------------TLIYG 274
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ GBL+ A ++ E + +P+ TY+TL+ G C++G+++ AF +RM E I D
Sbjct: 275 LCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 334
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
V + LISGL ++G+ + K+L M G P++ +Y ++ K +L+
Sbjct: 335 DVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLK 394
Query: 328 RMICERMSPSFVSYKKLIHG 347
M + PS V+Y L++G
Sbjct: 395 EMQRDGHVPSVVTYNVLMNG 414
>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
Length = 810
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 138/294 (46%), Gaps = 8/294 (2%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ PN Y ++ L +A R+D + ++ + +L D + +I G +
Sbjct: 403 WKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQL--NLDEVTFGLIIDCLCQKGLVDY 460
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
E L +M + C P + +N ++N G + + + + N +LK
Sbjct: 461 GAEVLREMTKFGCSPDIIIYNSLINGFSEN---GSVDDALELFKNMSCKRNVVTYNYMLK 517
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC E A ++ E K C PN T+STL+ LC+KG VE A + E+M
Sbjct: 518 GLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMP 577
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ + ++ LI+GL Q V++ +KLL M C P++ Y L GL +R+ +A EL+
Sbjct: 578 NVIIYSTLINGLSDQECVDDALKLLNDMP---CKPDTICYSAALKGLCRAERWEDAGELI 634
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI + P V++ LI+ LC++ +E V + M++ +P + ++ ++
Sbjct: 635 LEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLI 688
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 14/305 (4%)
Query: 90 NEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
N Y ++ L +A+++ DA + + + +K E C ++ F +I Y G + AI
Sbjct: 508 NVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDE--CLPNEVTFSTLIS-YLCQKGFVECAI 564
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E MP YNC P+V ++ ++N L + + + + + D C + LKGL
Sbjct: 565 EVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLND---MPCKPDTICYSAALKGL 621
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C E A ++ E ++NC P+ T+S L++ LC KG +E A + E M +
Sbjct: 622 CRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNV 681
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++ LI+G +Q + E+ ++LL M C P++ Y L GL KR+ +A+EL+
Sbjct: 682 FIYSSLINGFAEQYRAEDALQLLRNMP---CEPDTICYSAALKGLCRAKRWEDARELIAE 738
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
M ++ ++ LI LC LV+ V ++M G P R+I + G
Sbjct: 739 MFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPN----RKIHSSLVNGYS 794
Query: 389 NRNRV 393
+ RV
Sbjct: 795 EQRRV 799
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 48/324 (14%)
Query: 84 RKDYNPNEALYTLIINKLAQ---AKRFDAIEDIMQRIKVEKLCRFSDGFF-YNVIKIYGN 139
R PN+ + +II+ L Q A R + D M + CR + G YN I
Sbjct: 231 RSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSK------CRCTRGVIVYNEIISCLA 284
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
GR+ +A+ MP C P + ++N V+ L + + + + D
Sbjct: 285 ELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEV 341
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL--- 256
N ++ LC G ++ A V+++ PK C+P+ TYS L++ L E+G V++A LL
Sbjct: 342 TFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTI 401
Query: 257 -------------------ERMESEG----------IDADTVTFNILISGLRKQGKVEEG 287
+R + G ++ D VTF ++I L ++G V+ G
Sbjct: 402 PWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYG 461
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
++L M GC P+ Y ++ G + +A EL M C+R + V+Y ++ G
Sbjct: 462 AEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKR---NVVTYNYMLKG 518
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVP 371
LC + ED ++ +MV+ +P
Sbjct: 519 LCRAEQWEDAGKLVAEMVKDECLP 542
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 134/291 (46%), Gaps = 11/291 (3%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNM 140
S R P TL+I KL A R D E ++ + +D N ++ Y
Sbjct: 93 SMRDPERPAAVPCTLLIKKLCAAGRLDDAERVL---GASERAGTADAVTRNTLVAGYCRA 149
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
GR++ A L + + + V T+N L+ G + A + ++
Sbjct: 150 GGRLADAERMLASL-ALSGSADVVTYN---TLVAGYCREGRLNDARRLVADMPFAPNSYT 205
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ LLKGLC N + A +L E + C PN T+ ++H LC+ G + A G+L++M
Sbjct: 206 NSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMS 265
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ +N +IS L + G+VEE + L ++M C P+ SY V+ GL R+
Sbjct: 266 KCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWE 322
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A L+ M+ + P V++ +I LC++ LV+ V+++M + G P
Sbjct: 323 DAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKP 373
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 114/220 (51%), Gaps = 6/220 (2%)
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A E L +M C P+ TF ++++ L L G+ +K N ++
Sbjct: 222 AEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIIS 281
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
L E G +E A ++ D+ P C+P++ +Y+T+M GLC G E+A L+ M +
Sbjct: 282 CLAELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPP 338
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D VTFN +IS L +G V+ M+++E+M GC P++ +Y ++ L ++ +A EL+
Sbjct: 339 DEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELL 398
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
R I P+ V Y+ ++ GLC +DV ++ +M++
Sbjct: 399 -RTI--PWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIR 435
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 140/316 (44%), Gaps = 40/316 (12%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R N +E + LII+ L Q D ++++ ++ K D YN + + G
Sbjct: 435 RNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLR--EMTKFGCSPDIIIYNSLINGFSENGS 492
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+E +M +C +V T+N +L L A+ + + + K + +
Sbjct: 493 VDDALELFKNM---SCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFST 549
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL------- 256
L+ LC+ G +E A V ++ PK NC PNV YSTL++GL ++ V++A LL
Sbjct: 550 LISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMPCKP 609
Query: 257 ---------------ERMESEG----------IDADTVTFNILISGLRKQGKVEEGMKLL 291
ER E G D VTF+ILI+ L +G +E ++
Sbjct: 610 DTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVS 669
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E M C PN Y ++ G ++ R +A +L+ M CE P + Y + GLC
Sbjct: 670 ELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMPCE---PDTICYSAALKGLCRA 726
Query: 352 KLVEDVDWVLKKMVQQ 367
K ED ++ +M ++
Sbjct: 727 KRWEDARELIAEMFRK 742
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 135/296 (45%), Gaps = 16/296 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y ++ L + R++ ++ + V K C D +N + Y G + A+
Sbjct: 303 PDIFSYNTVMKGLCRDGRWEDAGTLIAGM-VRKDCP-PDEVTFNTVISYLCHRGLVDCAM 360
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI----DACCLNIL 204
E + MP Y C P T++ ++N L +G A +L I + C +
Sbjct: 361 EVVEQMPKYGCKPDNFTYSALVNALSE-------RGCVDDALELLRTIPWKPNTVCYRSV 413
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
LKGLC + ++ E + + T+ ++ LC+KG V+ +L M G
Sbjct: 414 LKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGC 473
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D + +N LI+G + G V++ ++L + M C N +Y +L GL +++ +A +
Sbjct: 474 SPDIIIYNSLINGFSENGSVDDALELFKNMS---CKRNVVTYNYMLKGLCRAEQWEDAGK 530
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LV M+ + P+ V++ LI LC + VE V +KM + +P + ++ ++
Sbjct: 531 LVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLI 586
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 24/287 (8%)
Query: 53 KDWLSPTEVL--KIFSNLRDPISVISVLNQYSKRKDYN--PNEALYTLIINKLAQAKRFD 108
KD P EV + S L V + + K YN PN +Y+ +IN L+ + D
Sbjct: 537 KDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVD 596
Query: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL 168
++ + + D Y+ A R A E + +M NC P TF++
Sbjct: 597 DALKLLNDMPCKP-----DTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSI 651
Query: 169 VLN------LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
++N L SA E+ Y + + + L+ G E E A +L
Sbjct: 652 LINNLCHKGFLESATEVSELMLKYECMPNVFI------YSSLINGFAEQYRAEDALQLLR 705
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
P CEP+ YS + GLC E+A L+ M + D TF++LI L + G
Sbjct: 706 NMP---CEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNG 762
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
V+ ++ E+M GC PN + ++ G +++R E +L+ M
Sbjct: 763 LVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 6/184 (3%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN-VEEAFGLLERME 260
+L+K LC G L+ A VL + V T +TL+ G C G + +A +L +
Sbjct: 106 TLLIKKLCAAGRLDDAERVLGASERAGTADAV-TRNTLVAGYCRAGGRLADAERMLASLA 164
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G AD VT+N L++G ++G++ + +L+ M PNS + +L GL K +
Sbjct: 165 LSG-SADVVTYNTLVAGYCREGRLNDARRLVADMPFA---PNSYTNSTLLKGLCSNKEWD 220
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+A+EL+ MI P+ +++ +IH LC L + VL +M + + ++ EI+
Sbjct: 221 DAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEII 280
Query: 381 GCVT 384
C+
Sbjct: 281 SCLA 284
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 2/285 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ T++IN R D ++ K+ KL D + + + G+I +A+
Sbjct: 89 PDVYTLTIVINSFCHLNRVDFALSVLA--KILKLGHQPDTATFTTLVRGLCVVGKIGEAL 146
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M P+V T+ ++N L + E +++ G+ D N L+ L
Sbjct: 147 DVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHAL 206
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C + +L+E K PNV + + ++ LC++G V EA +++ M G++ D
Sbjct: 207 CNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDV 266
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ L+ G + +++E +K+ + M GC N SY ++ G +R +A L
Sbjct: 267 VTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEE 326
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
M + + P+ ++Y LIHGLC+ ++D + +MV G +P +
Sbjct: 327 MCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNL 371
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 145/309 (46%), Gaps = 16/309 (5%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D + T V+ F +L +SVL + K + P+ A +T ++ L + D+
Sbjct: 90 DVYTLTIVINSFCHLNRVDFALSVLAKILKLG-HQPDTATFTTLVRGLCVVGKIGEALDV 148
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAG------RISKAIETLFDMPSYNCWPSVKTFN 167
++ +GF NV+ YG + ++++A+ +M + P + T+N
Sbjct: 149 FDKM-------VGEGFQPNVVT-YGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYN 200
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+++ L + + + + K + + LNI++ LC+ G + A V+D +
Sbjct: 201 SLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQG 260
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
EP+V TY+ LM G C + ++EA + + M G + V++N LI+G K ++++
Sbjct: 261 GVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKA 320
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
M L E M + PN+ +Y +++GL R +A L M+ P+ V+Y L+
Sbjct: 321 MYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDY 380
Query: 348 LC-NQKLVE 355
LC N +L E
Sbjct: 381 LCKNHRLAE 389
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ + M + P + F +L + K Y + + G+ D L I
Sbjct: 37 LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C ++ A VL + K +P+ T++TL+ GLC G + EA + ++M EG
Sbjct: 97 VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+ L++GL K ++ E + L M KG P+ +Y +++ L + +
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ M+ ++ P+ VS ++ LC + V + V+ M+Q G P
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEP 264
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++++A + + M P V T+ +++ E ++ + G +
Sbjct: 245 GKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSY 304
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C+ ++ A Y+ +E +Q PN TYSTL+HGLC G +++A L M +
Sbjct: 305 NTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVA 364
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + VT++IL+ L K ++ E M LL+ ++G P+ Y + G+
Sbjct: 365 CGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEA 424
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
A++L + + P ++ +I GLC + L+++ + ++M + G
Sbjct: 425 ARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENG 471
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 6/287 (2%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRIS 145
+ PN Y ++N L + ++ ++ + + + D F YN +I N+
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGIS--PDIFTYNSLIHALCNLCEW-- 212
Query: 146 KAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
K + TL +M P+V + N+V++ L E + + GVE D L
Sbjct: 213 KHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAAL 272
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G C ++ A V D + C NV +Y+TL++G C+ +++A L E M + +
Sbjct: 273 MDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQEL 332
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+T+T++ LI GL G++++ + L M G PN +Y +L L R EA
Sbjct: 333 IPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMA 392
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L+ + + P Y I G+C +E + + +G P
Sbjct: 393 LLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQP 439
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI KA+ +M P+ T++ +++ L + ++ G + +
Sbjct: 316 RIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYS 375
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
ILL LC+N L A +L N +P+V+ Y+ + G+C G++E A L +
Sbjct: 376 ILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPR 435
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ D T NI+I GL K+G ++E KL M GC N +Y + GLL + A
Sbjct: 436 GLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRA 495
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+L+ M+ S + L+ L + L + V +L
Sbjct: 496 IQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQIL 534
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 116/249 (46%), Gaps = 14/249 (5%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR---FSDGFFYNVIKIYG-NMAGRIS 145
N Y +IN + +R D + E++CR + Y+ + I+G GR+
Sbjct: 300 NVVSYNTLINGYCKIQRIDKAMYLF-----EEMCRQELIPNTMTYSTL-IHGLCHVGRLQ 353
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
AI +M + P++ T++++L+ L E + + ++ D NI +
Sbjct: 354 DAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAI 413
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G+C G+LEAA + + +P+V T++ ++ GLC++G ++EA L M+ G
Sbjct: 414 DGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCL 473
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ T+N + GL + K ++LLE M +G + S +L +L ++
Sbjct: 474 RNGCTYNTITQGLLQNNKTSRAIQLLEEMLARG-FSADVSTTALLVKMLSDDGLDQS--- 529
Query: 326 VGRMICERM 334
V +++CE M
Sbjct: 530 VKQILCEFM 538
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 76/150 (50%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P + ++ L+ + + + L ++M+S GI D T I+I+ +V+ + +
Sbjct: 54 PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L ++ G P++A++ ++ GL + EA ++ +M+ E P+ V+Y L++GLC
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + + +M+ +G P + + ++
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLI 203
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ KA++ L +M +C P+ T+ ++++ L E + + G+E+D +
Sbjct: 25 RLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYS 84
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C G L+ + DE ++ PNV YS L++G C+KG EA +L M
Sbjct: 85 TLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTER 144
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI D T+ +I GL K G+ + + L + M KG P++ +Y ++ GL + +A
Sbjct: 145 GIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDA 204
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ M+ + VSY LI GLCN +++ + +++ G
Sbjct: 205 FKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDG 250
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 139/288 (48%), Gaps = 4/288 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
KR + P+ Y IIN L + KR + D++ +++E + F Y ++ G
Sbjct: 2 KRINILPDIVSYNTIINGLCKEKRLEKAVDLL--VEMEGSSCEPNSFTYCILMDGLCKEG 59
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ +A+ L +M V ++ +++ S + ++ + G+ + +
Sbjct: 60 RVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYS 119
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G A VL ++ +P+V TY+ ++ GLC+ G +A L + M +
Sbjct: 120 CLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK 179
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + TVT+N+LI+GL K+G + + K+ E M KG SY ++ GL + + EA
Sbjct: 180 GEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEA 239
Query: 323 KELVGRMICER--MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+L ++ + + P +++ +I GLC + ++ + M+++G
Sbjct: 240 MKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERG 287
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N ++ GLC+ LE A +L E +CEPN TY LM GLC++G VEEA LL
Sbjct: 9 DIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLL 68
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M+ +G++ D V ++ LISG +G ++ G L + M KG PN Y ++ G K
Sbjct: 69 GEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKK 128
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ EA ++ M + P +Y +I GLC + M ++G P
Sbjct: 129 GLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEP 183
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 91/165 (55%), Gaps = 2/165 (1%)
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
N P++ +Y+T+++GLC++ +E+A LL ME + ++ T+ IL+ GL K+G+VEE
Sbjct: 5 NILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEA 64
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
M+LL MK KG + Y ++ G K K L M+ + +SP+ V Y LI+G
Sbjct: 65 MRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLING 124
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
C + L + VL M ++G P + + ++G + KD R R
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLC--KDGRAR 167
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 3/263 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ KA+E M + ++ T ++++ + + + + ++ KLG+ +
Sbjct: 271 GRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTY 330
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++++ G C+ L A + P + Y+TLM LC++ ++E+A L + M+
Sbjct: 331 SVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKE 390
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ DT++FNI+I G K G + +LL M+ G P++ +Y + L + E
Sbjct: 391 SNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEE 450
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
AK MI ++P Y LI G +E+V +L++M G + + + I
Sbjct: 451 AKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSI-- 508
Query: 382 CVTFGKDNRNRVYVTETVDSLAS 404
+TF ++ ++V E + + +S
Sbjct: 509 -LTFLCNSAEHLHVMELLPNFSS 530
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 132/304 (43%), Gaps = 14/304 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQ----AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
K P+ Y ++IN L + F E ++++ K ++ YN + +
Sbjct: 178 EKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVS------YNTLIMGLC 231
Query: 140 MAGRISKAIE---TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G++ +A++ +L + +Y P V TFN V+ L + IY + + G
Sbjct: 232 NNGKLDEAMKLFSSLLEDGNY-VEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFG 290
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ +IL+ ++G ++ A + K P+ TYS ++ G C+ + A GL
Sbjct: 291 NLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLF 350
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
RM+ G+ +N L++ L K+ +E+ +L + MK C P++ S+ ++ G L
Sbjct: 351 SRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKA 410
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
AKEL+ M ++P +Y I+ L +E+ M+ G P ++
Sbjct: 411 GDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVY 470
Query: 377 REIV 380
++
Sbjct: 471 DSLI 474
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 18/272 (6%)
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
E +K+FS+L + + + P+ + +I L + R D +I + +
Sbjct: 238 EAMKLFSSLLEDGNYVE------------PDVITFNTVIQGLCKEGRLDKAVEIYDTM-I 284
Query: 120 EKLCRFSDGFFYNVIKIYGNM--AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
E R S G + + G +G I KA+E + PS T++++++
Sbjct: 285 E---RGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMH 341
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
+ +G+++ G+ N L+ LC+ +LE A + E + NCEP+ +++
Sbjct: 342 MLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFN 401
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
++ G + G++ A LL M+ G+ D T++ I+ L K G++EE + M
Sbjct: 402 IMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIAS 461
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
G P++ Y ++ G E L+ +M
Sbjct: 462 GITPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P++ +N ++ L + + ++ + E D NI++ G + G++ +A +
Sbjct: 360 PTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKEL 419
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L++ + P+ TYS+ ++ L + G +EEA G + M + GI D ++ LI G
Sbjct: 420 LNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGL 479
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
++EE + LL +M G + +L L + EL+ E + +S
Sbjct: 480 NDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSIS 539
Query: 341 YKKLI 345
KL+
Sbjct: 540 CDKLL 544
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 97/246 (39%), Gaps = 12/246 (4%)
Query: 42 DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLN----QYSKRK--DYNPNEALYT 95
D +K HK L P+ +S + D + +LN +S+ K +P Y
Sbjct: 309 DKAMELWKRVHKLGLVPSST--TYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYN 366
Query: 96 LIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKAIETLFDM 154
++ L + + + Q +K E C D +N++ I G + AG I A E L DM
Sbjct: 367 TLMASLCKESSLEQARRLFQEMK-ESNCE-PDTISFNIM-IDGTLKAGDIHSAKELLNDM 423
Query: 155 PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
P T++ +N L E +G + S G+ D + L+KG N +
Sbjct: 424 QQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEI 483
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
E +L + ++ ++++ LC LL SE +++ + L
Sbjct: 484 EEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSISCDKL 543
Query: 275 ISGLRK 280
+ ++K
Sbjct: 544 LMKIQK 549
>gi|224076667|ref|XP_002304978.1| predicted protein [Populus trichocarpa]
gi|222847942|gb|EEE85489.1| predicted protein [Populus trichocarpa]
Length = 373
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 156/336 (46%), Gaps = 21/336 (6%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD----GF 129
++S + S+ + +Y + + +L + R I +I+ K F D F
Sbjct: 39 MVSRFKKCSESSSFRSRYDIYAITVKRLIKYNRLSMINEILDHQK-----NFPDMTNETF 93
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS- 188
++I +YG AG A + +MP C +V +FN +L ++A+ + EI+ +
Sbjct: 94 TAHLIYLYGK-AGMFDDARKLFDEMPDLKCPRTVFSFNALLLACINARRFDEIKKLLADF 152
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
++LG+ D +I + G C+ G+L +A V DE K + EPN+ T++TL++G G
Sbjct: 153 RSELGITFDVVSYSIAINGFCKMGDLVSAEMVFDEMIKSDVEPNLITFNTLLNGFYLNGK 212
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ + RM + D ++N + L + +++E ++++E M+ KG + S+
Sbjct: 213 FADGERIWSRMVEMNVVPDVRSYNAKLHALALENRMKEAIEVVEEMRDKGLELDVFSFNA 272
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ----------KLVEDVD 358
++ G L+ + EAK+ G M P+ V+++ LI LC + + + D
Sbjct: 273 LIRGFLNGEDLEEAKQWYGEMRRHGCEPNRVTFQFLIPFLCEKGDVGFAVEICEEIFDKK 332
Query: 359 WVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVY 394
W + V Q V R+ M +I +D + Y
Sbjct: 333 WHARAEVLQLVVNRLVMEAKIQDAEKLVQDGKKHKY 368
>gi|357483069|ref|XP_003611821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513156|gb|AES94779.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 749
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 119/239 (49%), Gaps = 1/239 (0%)
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+++ Y +M G KAIE+ M + P +N +L +++ KL +YT+ K
Sbjct: 90 LVRSYSHM-GYTEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKS 148
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
VE + N+L+ G C+ G ++ A +LDE + P V + +++++G C+ NV+EA
Sbjct: 149 NVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEA 208
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L M+ D ++ N++++G K G++EE + + +K G N SY ++
Sbjct: 209 HKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYASLINA 268
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+R+ EA +M E + P V Y +I GL + V + +L++M Q G P
Sbjct: 269 FFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTP 327
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 100/254 (39%), Gaps = 31/254 (12%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + A E L +M P V + +L A E ++ + D
Sbjct: 168 GEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISC 227
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N++L G C+ G LE A + N +Y++L++ + EA +M
Sbjct: 228 NVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYASLINAFFKARRYREAHACYTKMFK 287
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD------ 315
EGI D V + I+I GL K+G+V E K+LE M G P+S Y V+ GL D
Sbjct: 288 EGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNR 347
Query: 316 -------------------------KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+ EA+EL +M PS V++ LI+GLC
Sbjct: 348 AQSLSLEISEHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCK 407
Query: 351 QKLVEDVDWVLKKM 364
K +E + K+
Sbjct: 408 AKNLEKAKNLFCKL 421
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 131/326 (40%), Gaps = 66/326 (20%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-- 140
K ++ N Y +IN +A+R+ ++ F +G +V+ +Y M
Sbjct: 251 KNDGFSLNRNSYASLINAFFKARRYREAHACYTKM-------FKEGIVPDVV-LYAIMIR 302
Query: 141 ----AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
GR+ +A + L +M P +N V+ L L Q + + E
Sbjct: 303 GLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEIS----EH 358
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
+ C IL+ +C+ G + A + ++ K CEP+V T++TL++GLC+ N+E+A L
Sbjct: 359 NVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLF 418
Query: 257 ERME-----------SEG------------------------------------IDADTV 269
++E S+G + D +
Sbjct: 419 CKLEVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDII 478
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGC-YPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+NIL++ L +V E ++ KG P++ +Y ++ GL R EA ++ R
Sbjct: 479 TYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQR 538
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLV 354
M P+ Y+ L+ LC + V
Sbjct: 539 MQKTGSEPTLSVYRTLMTCLCRKSKV 564
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 13/254 (5%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV-EIDAC 199
AG+I +A + + D+ P + T+N++LN L + + K G D
Sbjct: 456 AGQILRAYKLITDLAG-EVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNV 514
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL-LER 258
++KGL + AF V K EP + Y TLM LC K V AF L LE
Sbjct: 515 TYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYLEH 574
Query: 259 MES-EGIDADTVTFNILISGLRKQ---GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
++S D D+ IS L K K+E+ ++ L + K A Y +L G
Sbjct: 575 LKSLPSRDNDS------ISTLEKYLFGEKLEQVIRGLLELDFKARDFKLAPYTILLIGFC 628
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+ EA ++ + + + S LI GLC ++ + D + +++GF+ +
Sbjct: 629 QAGKVSEALIILSVLDEFNIKINATSCVHLIRGLCKEQRLHDAVKIFLYSLEKGFMLKPM 688
Query: 375 MWREIVGCVTFGKD 388
+ ++ C+ + +D
Sbjct: 689 ICNHLLTCLLYSRD 702
>gi|255661010|gb|ACU25674.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 376
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 123/249 (49%), Gaps = 1/249 (0%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN + AGRI E L++M SV +FN+++ L E+ I+
Sbjct: 24 DAVVYNAMLNGFYRAGRIKDCFE-LWEMMGKEGSRSVASFNIMMRGLFDNGRVDEVNSIW 82
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
K G D+ IL+ G C+NG + + ++L+ ++ + Y +++GLC++
Sbjct: 83 ELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEIXERKGRXXDALAYXPMINGLCKE 142
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+E+A +L M G +T +N LI+GL K E+ +++ M C P +Y
Sbjct: 143 TKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGFPHCSPTIVTY 202
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL +RF EA +LV M+ + ++PS ++Y L+ GLC VE + ++ +
Sbjct: 203 SILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKVEMALQLWNQVTK 262
Query: 367 QGFVPRMGM 375
+GF P + M
Sbjct: 263 KGFKPDVQM 271
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ KA+ L M C P+ +N ++N L+ A + ++ +
Sbjct: 144 KLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGFPHCSPTIVTYS 203
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ GLC++ A+ ++ E ++ P+V TYS LM GLC VE A L ++ +
Sbjct: 204 ILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKVEMALQLWNQVTKK 263
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D NILI GL K + + L M C PN ++ ++ G A
Sbjct: 264 GFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWNCSPNLVTHNTLMEGFYKDGDIRNA 323
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ R++ + P +SY + GLC+ + D L V++ P
Sbjct: 324 LVMWARILKNELQPDIISYNITLKGLCSCNRISDAILFLHDAVRKKIFP 372
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 121/264 (45%), Gaps = 4/264 (1%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L + +RK + Y +IN L + + + ++ + ++ C+ + YN + I
Sbjct: 116 LLEIXERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGM-IQSGCK-PNTHVYNAL-IN 172
Query: 138 GNM-AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G + A + AI +M +C P++ T+++++N L ++ + E + + G+
Sbjct: 173 GLIGASKSEDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTP 232
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
++L+KGLC +E A + ++ K+ +P+V+ ++ L+HGLC + A L
Sbjct: 233 SVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLY 292
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M + VT N L+ G K G + + + R+ P+ SY L GL
Sbjct: 293 LDMNRWNCSPNLVTHNTLMEGFYKDGDIRNALVMWARILKNELQPDIISYNITLKGLCSC 352
Query: 317 KRFPEAKELVGRMICERMSPSFVS 340
R +A + + +++ P+ ++
Sbjct: 353 NRISDAILFLHDAVRKKIFPTKIT 376
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
CE+G+++ A V + P+ Y+ +++G G +++ F L E M EG
Sbjct: 1 CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEG-SRSV 59
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+FNI++ GL G+V+E + E MK G +S +Y +++G ++ L+
Sbjct: 60 ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLL-- 117
Query: 329 MICERMS--PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
I ER ++Y +I+GLC + +E VL M+Q G P ++ ++
Sbjct: 118 EIXERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALI 171
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 115/239 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ A + + + PS+ +N ++N L + E + ++ + G+ +
Sbjct: 345 GKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTY 404
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+IL+ C G L+ A + L + + V Y++L++G C+ GN+ A + M
Sbjct: 405 SILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMID 464
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G+ V++ LISG +GK+ E +L M GKG PN+ ++ ++ L R +
Sbjct: 465 KGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTD 524
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A L M+ + M P+ V+Y +I G C + +L +MVQ+G VP +R ++
Sbjct: 525 AFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLI 583
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 140/315 (44%), Gaps = 6/315 (1%)
Query: 58 PTEVL--KIFSNLRDPISVISVLNQYSKRKDYN--PNEALYTLIINKLAQAKRFDAIEDI 113
PTE + LR V+ + ++ K P+ +Y +IN L + +FD E +
Sbjct: 329 PTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELL 388
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ + + LC ++ Y+++ G++ AI L M +V +N ++N
Sbjct: 389 FKEMGEKGLC--ANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGH 446
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
+ G++ L+ G C G L AF + E + PN
Sbjct: 447 CKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNT 506
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
T++TL+ L + +AF L + M + + + VT+N++I G K+G + +LL +
Sbjct: 507 YTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQ 566
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M KG P++ +Y+ ++ L R EAK+ + + E + + Y L+HG C +
Sbjct: 567 MVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGR 626
Query: 354 VEDVDWVLKKMVQQG 368
+ D V ++MV++G
Sbjct: 627 LRDALGVCREMVKRG 641
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 130/284 (45%), Gaps = 6/284 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-RISKA 147
P+ +Y +I + K F ++++QR++ L + YNV+ I+G R+ +A
Sbjct: 226 PDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL----NVVVYNVL-IHGLCKNKRVWEA 280
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+E + S T+ ++ L + + G+ +LG L+ L++G
Sbjct: 281 VEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEG 340
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L G + AF +++ K P++ Y+ L++ LC+ G +EA L + M +G+ A+
Sbjct: 341 LRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAN 400
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT++ILI ++GK++ + L +M G Y ++ G A
Sbjct: 401 DVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFD 460
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
MI + + P+ VSY LI G CN+ + + + +M +G P
Sbjct: 461 EMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAP 504
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
A R++ A +M N P+ T+N+++ + + + G+ D
Sbjct: 519 ANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYT 578
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ LC G + A +D+ +++ + N YS L+HG C++G + +A G+ M
Sbjct: 579 YRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMV 638
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+D D V + +LI G K+ LL+ M + P+ Y ++ G
Sbjct: 639 KRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVK 698
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A + MI E +P+ V+Y LI+ LC L++ + + K+M+ P
Sbjct: 699 KAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTP 749
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 2/257 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN +T +I+ L +A R + + + + + YNV+ G
Sbjct: 500 KGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNM--MPNEVTYNVMIEGHCKEGNT 557
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
KA E L M P T+ +++ L S E + + +++ C + L
Sbjct: 558 VKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSAL 617
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L G C+ G L A V E K+ + ++ Y+ L+ G ++ + FGLL+ M + +
Sbjct: 618 LHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRL 677
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D V + +I G K G V++ + + M +GC PN +Y ++ L +A+
Sbjct: 678 RPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAEL 737
Query: 325 LVGRMICERMSPSFVSY 341
L M+ +P+ V+Y
Sbjct: 738 LWKEMLVSNSTPNHVTY 754
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
GI+ G + L+ LC+ G ++ A + E N PN TY + L
Sbjct: 702 GIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHL 761
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
+G++E+A L M +G+ A+TV++NIL+ G K G+VEE KLL+ M +P+
Sbjct: 762 AREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDC 820
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y ++Y + A E M+ + + P ++Y LI+G C + +
Sbjct: 821 ITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDD 880
Query: 364 MVQQGFVP 371
M+++G P
Sbjct: 881 MIRRGVKP 888
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 146/338 (43%), Gaps = 21/338 (6%)
Query: 13 QSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPI 72
+ +I SL S + + F D +KLN + + LRD +
Sbjct: 580 RPLISSLCSTGRVCEAKKFI--------DDLHREHFKLNEMCYSALLHGYCKEGRLRDAL 631
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
V + ++ + + Y ++I+ + + A+ +++ + ++L R + +
Sbjct: 632 GVCREM----VKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRL-RPDKVIYTS 686
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS---A 189
+I Y AG + KA M C P++ T+ ++N L A L + + ++ +
Sbjct: 687 MIDGYSK-AGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVS 745
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ CC L L G++E A + ++ K N +Y+ L+ G C+ G V
Sbjct: 746 NSTPNHVTYCCF---LDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRV 801
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EEA LL+ M I D +T++ +I ++G ++ ++ + M KG P++ +Y +
Sbjct: 802 EEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFL 861
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+YG +A EL MI + P+ ++K L HG
Sbjct: 862 IYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 142/367 (38%), Gaps = 37/367 (10%)
Query: 17 QSLSSASTITRKR---TFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPIS 73
Q +++ I R + A P S + HH K+ L+ F
Sbjct: 41 QFIATLRNIVRGKESWKIAFNDPFISTKLKPHHVEKVLLLTLDDTRLALRFF-------- 92
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
N K++N + + ++I+ L A F ++Q + +
Sbjct: 93 -----NFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLR------------- 134
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
G + R + E L D + S F+L++ V K + I+ +
Sbjct: 135 ----GGLDPR--EVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCE 188
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
+ L +L GL + ++ + E P++ Y ++ CE N +A
Sbjct: 189 LMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAK 248
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
+++RMES D + V +N+LI GL K +V E +++ + KG + +Y ++ GL
Sbjct: 249 EMIQRMESS--DLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGL 306
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ F ++ MI P+ + L+ GL + V D ++ ++ + G +P +
Sbjct: 307 CKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSL 366
Query: 374 GMWREIV 380
++ ++
Sbjct: 367 FVYNALI 373
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 34/195 (17%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEK-------LCRFSD-----GFFYNVIK 135
PN YT +IN+L +A D E + + + V C F D G ++
Sbjct: 713 TPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQ 772
Query: 136 IYGNMA--------------------GRISKAIETLFDMPSYNCWPSVKTFNLVL-NLLV 174
++ +M GR+ +A + L +M +P T++ ++
Sbjct: 773 LHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCR 832
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
L G I+ + + G++ D N L+ G C G L AF + D+ ++ +PN
Sbjct: 833 RGNLDGAIE-FWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQA 891
Query: 235 TYSTLMHGLCEKGNV 249
T+ +L HG K ++
Sbjct: 892 THKSLSHGASRKFSI 906
>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 118/239 (49%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ KAI+ + M P ++ +++ L G + + G + N
Sbjct: 112 KMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYN 171
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L++GLC +GNL + +LD ++ PN TYS L+ ++ +EA LL+ + ++
Sbjct: 172 SLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAK 231
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + V++N+L++GL K+G+ E+ M+L + KG PN SY +L L ++ R+ EA
Sbjct: 232 GGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEA 291
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
L+ M + SPS V+Y LI L E VL++M++ F P + I+
Sbjct: 292 NVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIA 350
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+ DA L+ LC GN+ A ++D+ + N TY++L+ GLC GN+ ++
Sbjct: 127 GIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQS 186
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LL+R+ +G+ + T++ L+ K+ +E KLL+ + KG PN SY +L G
Sbjct: 187 LQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTG 246
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L + R +A +L + + SP+ VSY L+ LCN+ E+ + +L +M P
Sbjct: 247 LCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPS 306
Query: 373 MGMWREIVGCVTFGKDNRNRVYVTE 397
+ ++G +T + + V E
Sbjct: 307 TVTYNILIGSLTLHGRTEHALEVLE 331
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 131/277 (47%), Gaps = 5/277 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRI-KVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ A YT +++ L R + MQ + K+E+ ++ YN + M G ++++
Sbjct: 130 PDAASYTFLVSSLC---RKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQS 186
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ L + P+ T++ +L + E + G + + N+LL G
Sbjct: 187 LQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTG 246
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G E A + E P + PNV +Y+ L+ LC +G EEA LL M+ +
Sbjct: 247 LCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPS 306
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TVT+NILI L G+ E +++LE M P ++SY ++ L ++ + +
Sbjct: 307 TVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLD 366
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+M+ +P+ +Y I LC + +V++ +++ +
Sbjct: 367 QMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSL 402
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + A++ + M Y + T+N LV L + L +Q + + G+ +A
Sbjct: 146 GNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ-LLDRLIQKGLVPNAYT 204
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ LL+ + + A +LDE + +PN+ +Y+ L+ GLC++G E+A L +
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+G + V++NIL+ L +G+ EE LL M G P++ +Y ++ L R
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTE 324
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A E++ MI R P+ SY +I LC + V+ V L +M+ + P G + I
Sbjct: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAI 383
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 133/314 (42%), Gaps = 37/314 (11%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K ++PN Y +++ L R++ ++ + ++ R YN++ + GR
Sbjct: 266 KGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDE--RSPSTVTYNILIGSLTLHGRT 323
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+E L +M P+ ++N ++ L + V++ CL+ +
Sbjct: 324 EHALEVLEEMIRARFKPTASSYNPIIARLCKDR---------------KVDLVVKCLDQM 368
Query: 205 L--------------KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ LCE G ++ AF ++ + Y ++ LC KGN
Sbjct: 369 MYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTY 428
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
AF LL M G D+ T++ LI GL +G + E +++ M+ + ++ +Y ++
Sbjct: 429 PAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME-ENIKLDTENYNSLI 487
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM-----V 365
G +R A ++ M+ + + +Y L+ G+ ++K ++ VL+++ +
Sbjct: 488 LGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVI 547
Query: 366 QQGFVPRMGMWREI 379
Q V R+ M ++
Sbjct: 548 NQSTVERLVMQYDL 561
>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 118/239 (49%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ KAI+ + M P ++ +++ L G + + G + N
Sbjct: 112 KMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYN 171
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L++GLC +GNL + +LD ++ PN TYS L+ ++ +EA LL+ + ++
Sbjct: 172 SLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAK 231
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + V++N+L++GL K+G+ E+ M+L + KG PN SY +L L ++ R+ EA
Sbjct: 232 GGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEA 291
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
L+ M + SPS V+Y LI L E VL++M++ F P + I+
Sbjct: 292 NVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIA 350
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+ DA L+ LC GN+ A ++D+ + N TY++L+ GLC GN+ ++
Sbjct: 127 GIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQS 186
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LL+R+ +G+ + T++ L+ K+ +E KLL+ + KG PN SY +L G
Sbjct: 187 LQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTG 246
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L + R +A +L + + SP+ VSY L+ LCN+ E+ + +L +M P
Sbjct: 247 LCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPS 306
Query: 373 MGMWREIVGCVTFGKDNRNRVYVTE 397
+ ++G +T + + V E
Sbjct: 307 TVTYNILIGSLTLHGRTEHALEVLE 331
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 131/277 (47%), Gaps = 5/277 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRI-KVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ A YT +++ L R + MQ + K+E+ ++ YN + M G ++++
Sbjct: 130 PDAASYTFLVSSLC---RKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQS 186
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ L + P+ T++ +L + E + G + + N+LL G
Sbjct: 187 LQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTG 246
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+ G E A + E P + PNV +Y+ L+ LC +G EEA LL M+ +
Sbjct: 247 LCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPS 306
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TVT+NILI L G+ E +++LE M P ++SY ++ L ++ + +
Sbjct: 307 TVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLD 366
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+M+ +P+ +Y I LC + +V++ +++ +
Sbjct: 367 QMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSL 402
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + A++ + M Y + T+N LV L + L +Q + + G+ +A
Sbjct: 146 GNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ-LLDRLIQKGLVPNAYT 204
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ LL+ + + A +LDE + +PN+ +Y+ L+ GLC++G E+A L +
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+G + V++NIL+ L +G+ EE LL M G P++ +Y ++ L R
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTE 324
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A E++ MI R P+ SY +I LC + V+ V L +M+ + P G + I
Sbjct: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAI 383
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 133/314 (42%), Gaps = 37/314 (11%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K ++PN Y +++ L R++ ++ + ++ R YN++ + GR
Sbjct: 266 KGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDE--RSPSTVTYNILIGSLTLHGRT 323
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+E L +M P+ ++N ++ L + V++ CL+ +
Sbjct: 324 EHALEVLEEMIRARFKPTASSYNPIIARLCKDR---------------KVDLVVKCLDQM 368
Query: 205 L--------------KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ LCE G ++ AF ++ + Y ++ LC KGN
Sbjct: 369 MYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTY 428
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
AF LL M G D+ T++ LI GL +G + E +++ M+ + ++ +Y ++
Sbjct: 429 PAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME-ENIKLDTENYNSLI 487
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM-----V 365
G +R A ++ M+ + + +Y L+ G+ ++K ++ VL+++ +
Sbjct: 488 LGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVI 547
Query: 366 QQGFVPRMGMWREI 379
Q V R+ M ++
Sbjct: 548 NQSTVERLIMQYDL 561
>gi|302771776|ref|XP_002969306.1| hypothetical protein SELMODRAFT_61378 [Selaginella moellendorffii]
gi|300162782|gb|EFJ29394.1| hypothetical protein SELMODRAFT_61378 [Selaginella moellendorffii]
Length = 587
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 141/310 (45%), Gaps = 33/310 (10%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y +I LA+A +F+ + D+M+ + G F VIK YG AG + A+ TL
Sbjct: 3 YARVIVGLAKAWQFEQMWDLMEEMDKRAHLHIPAGIFSTVIKCYGR-AGDVKGAVATLKR 61
Query: 154 MPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA--------KLGV----EIDAC- 199
M ++C P +T+ ++ +++ A +Y + A LG +D C
Sbjct: 62 MSDDFSCTPVARTYEALIRVVMDAGQCDTALSVYRAMADRVTYNLVALGCCRSGRLDTCV 121
Query: 200 ----------------CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
N L+ GLC+ G + A+ VL + C V T ST++H L
Sbjct: 122 EIYQEMRSRGFRVSHLAFNSLVCGLCKAGRTDEAWDVLGKSRPSACADAV-TLSTVIHAL 180
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C + + A L+ M+++ + + VT+ +I GL K G+ + M LL++M+ GC PN+
Sbjct: 181 CSS-DCDRALELMRAMQAQRVPPNVVTYTSVIDGLCKAGRRDAAMVLLQQMQAAGCSPNT 239
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y +++ L + +A L+ M + +PS + L+ G+C ++E K
Sbjct: 240 VTYNCLIHSLCKAGKLEDAFALLRGMPSKGCTPSINNKNTLVSGICKHAIMERQRREFGK 299
Query: 364 MVQQGFVPRM 373
+ Q F M
Sbjct: 300 LGQALFSEAM 309
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 134/336 (39%), Gaps = 57/336 (16%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN YT +I+ L +A R DA ++Q+++ + YN + AG++ A
Sbjct: 202 PNVVTYTSVIDGLCKAGRRDAAMVLLQQMQAAGCS--PNTVTYNCLIHSLCKAGKLEDAF 259
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKL-------YGEI-QGIYTSAAKLGVEIDACC 200
L MPS C PS+ N +++ + + +G++ Q +++ A + ++
Sbjct: 260 ALLRGMPSKGCTPSINNKNTLVSGICKHAIMERQRREFGKLGQALFSEAMQESYSVEEDT 319
Query: 201 LNILLKGLCENGNLEAAFYVLDE--FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
L A FY E F P+ RTYS ++H LC+ V EA +
Sbjct: 320 L--------------ALFYTCLEHMFGSNGDRPDKRTYSIVIHFLCKADKVLEAARVWRA 365
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM------------------------ 294
M D VT+N + GL K + E +L +
Sbjct: 366 MVKRLGQVDAVTYNSFLYGLLKLNDLSEAARLFSEIDKPTLVSYSLLVHAYFKAGDLSKV 425
Query: 295 -------KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
G+G P+ A Y VL+GL K+ L M+ +SPS +Y LIH
Sbjct: 426 EEVYQAATGQGLRPDLALYNIVLHGLSGAKQEAGVAHLWAEMLNNGVSPSVATYTILIHA 485
Query: 348 LCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
LC ++ ++ KM QG +P + ++ C+
Sbjct: 486 LCRDNRLQAARQIIDKMKGQGVLPDAITYNTLLHCL 521
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 103/208 (49%), Gaps = 6/208 (2%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P +T+++V++ L A E ++ + K ++DA N L GL + +L A +
Sbjct: 338 PDKRTYSIVIHFLCKADKVLEAARVWRAMVKRLGQVDAVTYNSFLYGLLKLNDLSEAARL 397
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
E K P + +YS L+H + G++ + + + +G+ D +NI++ GL
Sbjct: 398 FSEIDK----PTLVSYSLLVHAYFKAGDLSKVEEVYQAATGQGLRPDLALYNIVLHGL-S 452
Query: 281 QGKVEEGMK-LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K E G+ L M G P+ A+Y +++ L R A++++ +M + + P +
Sbjct: 453 GAKQEAGVAHLWAEMLNNGVSPSVATYTILIHALCRDNRLQAARQIIDKMKGQGVLPDAI 512
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+Y L+H LC +L+++ +L++M Q
Sbjct: 513 TYNTLLHCLCKNELLDEARLLLREMKQH 540
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 128/262 (48%), Gaps = 17/262 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS----DGFFYNVIKIYG-NMAGR 143
P++ Y+++I+ L +A + + R V++L + + F Y ++K+ + A R
Sbjct: 338 PDKRTYSIVIHFLCKADKVLEAARVW-RAMVKRLGQVDAVTYNSFLYGLLKLNDLSEAAR 396
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ I+ P++ +++L+++ A +++ +Y +A G+ D NI
Sbjct: 397 LFSEIDK----------PTLVSYSLLVHAYFKAGDLSKVEEVYQAATGQGLRPDLALYNI 446
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L GL ++ E P+V TY+ L+H LC ++ A ++++M+ +G
Sbjct: 447 VLHGLSGAKQEAGVAHLWAEMLNNGVSPSVATYTILIHALCRDNRLQAARQIIDKMKGQG 506
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D +T+N L+ L K ++E LL MK + C A++ V+ G+L+++ A+
Sbjct: 507 VLPDAITYNTLLHCLCKNELLDEARLLLREMK-QHCSYTPATWNIVIDGILEQRDPGVAQ 565
Query: 324 ELVGRMICERMSPSFVSYKKLI 345
+ ++I + P+ ++Y +
Sbjct: 566 RIFSQLIRDGFFPAHLTYDAFV 587
>gi|302143623|emb|CBI22376.3| unnamed protein product [Vitis vinifera]
Length = 554
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 133/273 (48%), Gaps = 2/273 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
YT++I + + ++++ + +E + D YN + Y G+ +++
Sbjct: 273 YTVLIELVCKHCGTVQAMEVLEDMAIEGC--YPDIVTYNSLVNYTCKQGKYEDTALIIYN 330
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+ S+ P+ T+N +L+ L + + E+ I NIL+ GLC+ G
Sbjct: 331 LLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGL 390
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A D+ NC P++ TY+TL+ LC++G V+EA LL + +T+NI
Sbjct: 391 LDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNI 450
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
+I GL K+G +E+ M+L M +G P+ +++ + +GL +A ++ M
Sbjct: 451 VIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRN 510
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+++ +IHGLC ++E+ + + +K+ +
Sbjct: 511 QRIKNSAFRFVIHGLCAAGMIEEANQLHQKLTE 543
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 87/163 (53%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+L+ GLC+ G L+ A +LDE C P+ TY+T++ + + G ++A G +
Sbjct: 204 NMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLR 263
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G A +T+ +LI + K + M++LE M +GCYP+ +Y ++ + ++ +
Sbjct: 264 KGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYED 323
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ ++ M P+ V+Y L+H LC ++VD +L M
Sbjct: 324 TALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIM 366
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 4/247 (1%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG-- 184
D YN I G +AI D C + T+ +++ L+ K G +Q
Sbjct: 234 DAITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELV--CKHCGTVQAME 291
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ A G D N L+ C+ G E ++ PN TY+TL+H LC
Sbjct: 292 VLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLC 351
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
G +E +L M + VT+NILI+GL K G ++ + ++M C P+
Sbjct: 352 THGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDII 411
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y +L L + EA L+ + R SP ++Y +I GL + +E + +M
Sbjct: 412 TYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEM 471
Query: 365 VQQGFVP 371
+++GF P
Sbjct: 472 IERGFAP 478
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + T+N+++ L L + + G DA N +L+ + ++G + A
Sbjct: 198 PDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGF 257
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ ++ C + TY+ L+ +C+ +A +LE M EG D VT+N L++ K
Sbjct: 258 WKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCK 317
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
QGK E+ ++ + G PN+ +Y +L+ L + E E++ M P+ V+
Sbjct: 318 QGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVT 377
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LI+GLC L++ +MV +P
Sbjct: 378 YNILINGLCKYGLLDRAINFFDQMVSHNCLP 408
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L+ LC G L A ++D ++N P + L+ GL + + E A +L+ M
Sbjct: 134 NEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVM 193
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G D +T+N+L+ GL K+G ++ ++LL+ M GC P++ +Y +L + D F +
Sbjct: 194 SGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQ 253
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A + + ++Y LI +C VL+ M +G P + + +V
Sbjct: 254 AIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLV 312
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 2/206 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ L +D +++I+ + + + YN++ G + +AI
Sbjct: 338 PNTVTYNTLLHSLCTHGYWDEVDEIL--LIMNTTSQPPTVVTYNILINGLCKYGLLDRAI 395
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M S+NC P + T+N +L L + E + S NI++ GL
Sbjct: 396 NFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGL 455
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G +E A + E ++ P+ T+ TL GL VE+A +L+ M
Sbjct: 456 AKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKN 515
Query: 269 VTFNILISGLRKQGKVEEGMKLLERM 294
F +I GL G +EE +L +++
Sbjct: 516 SAFRFVIHGLCAAGMIEEANQLHQKL 541
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 81/208 (38%), Gaps = 19/208 (9%)
Query: 52 HKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIE 111
H W E+L I + P +V++ Y ++IN L + D
Sbjct: 353 HGYWDEVDEILLIMNTTSQPPTVVT-----------------YNILINGLCKYGLLDRAI 395
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+ ++ V C D YN + G + +A+ L + C P + T+N+V++
Sbjct: 396 NFFDQM-VSHNC-LPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVID 453
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L + +Y + G D L GL +E A +L E K+N
Sbjct: 454 GLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRI 513
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+ ++HGLC G +EEA L +++
Sbjct: 514 KNSAFRFVIHGLCAAGMIEEANQLHQKL 541
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 56/125 (44%)
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
++ + D T N ++ L +GK+ +L++ M + P S ++ GL+ +
Sbjct: 121 LDGSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLES 180
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
A ++ M+ P ++Y L+ GLC + L++ +L +M G P +
Sbjct: 181 TERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNT 240
Query: 379 IVGCV 383
I+ C+
Sbjct: 241 ILRCM 245
>gi|297849166|ref|XP_002892464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338306|gb|EFH68723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 116/236 (49%)
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
++A++ L DM C+P + T+N ++N E+ + G+E++ N L
Sbjct: 257 ARAMDVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTL 316
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L LC N + +L+ + + P V TY+ L++GLC+ + A +M +
Sbjct: 317 LHSLCSNEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKC 376
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VT+N L+ + K+G V++ ++LL +K C P +Y V+ GL K +A E
Sbjct: 377 LPDIVTYNTLLGAMSKEGMVDDAIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALE 436
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L M+ +SP ++ + LI+G C LVE+ VLK+ +G R +R ++
Sbjct: 437 LYHHMLDAGISPDDITRRSLIYGFCRANLVEEASQVLKETSNRGNGIRGSTYRLVI 492
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 132/289 (45%), Gaps = 6/289 (2%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
L L+ A+ D +ED+ VE + D YN + Y G + + +
Sbjct: 245 VLVELVCRYCGSARAMDVLEDM----AVEGC--YPDIVTYNSLVNYNCRRGNLEEVALVI 298
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+ S+ + T+N +L+ L S + + E++ I + NIL+ GLC+
Sbjct: 299 QHILSHGLELNTVTYNTLLHSLCSNEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKA 358
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
L A + +Q C P++ TY+TL+ + ++G V++A LL ++S +T+
Sbjct: 359 RLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDDAIELLGLLKSTSCLPGLITY 418
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N +I GL ++G +++ ++L M G P+ + + ++YG EA +++
Sbjct: 419 NSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSLIYGFCRANLVEEASQVLKETSN 478
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+Y+ +I GLC ++ +E V++ M+ G P ++ IV
Sbjct: 479 RGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSGCKPDETIYTAIV 527
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 112/242 (46%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ KA+ L M P T+N+++ L + + G D N
Sbjct: 150 QLDKAMVILRIMVMSGGVPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYN 209
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+++ + ++GN E A + + C P + TY+ L+ +C A +LE M E
Sbjct: 210 TVIRCMFDHGNAEQAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVE 269
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D VT+N L++ ++G +EE +++ + G N+ +Y +L+ L + + E
Sbjct: 270 GCYPDIVTYNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEV 329
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
+E++ M P+ ++Y LI+GLC +L+ +M++Q +P + + ++G
Sbjct: 330 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGA 389
Query: 383 VT 384
++
Sbjct: 390 MS 391
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 125/278 (44%), Gaps = 5/278 (1%)
Query: 106 RFDAIEDIMQRIKVEKLCR-FSDGFFYNVIKIYGNMA--GRISKAIETLFDMPSYNCWPS 162
R D ++ M +++ + D YN+I GN+ G I A+ L DM P
Sbjct: 147 RIDQLDKAMVILRIMVMSGGVPDTITYNMI--IGNLCKKGHIRSALVLLEDMSLSGSPPD 204
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
V T+N V+ + + + + G +L++ +C A VL+
Sbjct: 205 VITYNTVIRCMFDHGNAEQAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLE 264
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
+ + C P++ TY++L++ C +GN+EE +++ + S G++ +TVT+N L+ L
Sbjct: 265 DMAVEGCYPDIVTYNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNE 324
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
+E ++L M P +Y ++ GL + A + +M+ ++ P V+Y
Sbjct: 325 YWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYN 384
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ + + +V+D +L + +P + + ++
Sbjct: 385 TLLGAMSKEGMVDDAIELLGLLKSTSCLPGLITYNSVI 422
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V T+N+++N L A+L + + D N LL + + G ++ A +
Sbjct: 343 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDDAIEL 402
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L +C P + TY++++ GL KG +++A L M GI D +T LI G +
Sbjct: 403 LGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSLIYGFCR 462
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
VEE ++L+ +G ++Y+ V+ GL K+ A E+V M+ P
Sbjct: 463 ANLVEEASQVLKETSNRGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSGCKPDETI 522
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQ 366
Y ++ G+ + + + KK+ Q
Sbjct: 523 YTAIVKGVEEMGMGSEAVQLQKKLTQ 548
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+ Y P Y ++IN L +A+ D ++ +E+ C D YN + + G
Sbjct: 338 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQM-LEQKC-LPDIVTYNTLLGAMSKEGM 395
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ AIE L + S +C P + T+N V++ L L + +Y G+ D
Sbjct: 396 VDDAIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRS 455
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C +E A VL E + TY ++ GLC+K +E A ++E M + G
Sbjct: 456 LIYGFCRANLVEEASQVLKETSNRGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSG 515
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERM 294
D + ++ G+ + G E ++L +++
Sbjct: 516 CKPDETIYTAIVKGVEEMGMGSEAVQLQKKL 546
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +L LC NG L A +++ + N P+ + S L+ GL +++A +L M
Sbjct: 104 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMVILRIMVM 163
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G DT+T+N++I L K+G + + LLE M G P+ +Y V+ + D +
Sbjct: 164 SGGVPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTVIRCMFDHGNAEQ 223
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A + P ++Y L+ +C VL+ M +G P + + +V
Sbjct: 224 AIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVEGCYPDIVTYNSLV 282
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 51/117 (43%)
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T N ++ L GK+ + KL+E M P+ S ++ GL + +A ++
Sbjct: 99 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMVIL 158
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
M+ P ++Y +I LC + + +L+ M G P + + ++ C+
Sbjct: 159 RIMVMSGGVPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTVIRCM 215
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 149/341 (43%), Gaps = 38/341 (11%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+S+L + K K + +Y II+ L + K D ++ + + + D F Y+ +
Sbjct: 243 LSLLKKMEKGK-IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI--RPDVFTYSSL 299
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
GR S A L DM P+V TF+ +++ V E + +Y K +
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ D + L+ G C + L+ A ++ + ++C PNV TYSTL+ G C+ VEE
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 255 LLERMESEGIDADTV-----------------------------------TFNILISGLR 279
L M G+ +TV T+NIL+ GL
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K GK+ + M + E ++ P+ +Y ++ G+ + + EL + + +SP+ +
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+Y +I G C + E+ D +LKKM + G +P G + ++
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 113/241 (46%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ A++ DM +PS+ FN +L+ + + + + LG+ D +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I + C L A VL + K EP++ T S+L++G C + +A L+++M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G DT TF LI GL K E + L+++M +GC P+ +Y V+ GL + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ V Y +I GLC K ++D + +M +G P + + ++ C
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 383 V 383
+
Sbjct: 303 L 303
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 123/238 (51%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++S A+ L M P + T + +LN +K + + ++G + D
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GL + A ++D+ ++ C+P++ TY T+++GLC++G+++ A LL++ME
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
I+AD V +N +I GL K +++ + L M KG P+ +Y ++ L + R+ +A
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
L+ MI +++P+ V++ LI + + + + + +M+++ P + + ++
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 118/246 (47%), Gaps = 2/246 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ +P+ Y+ +IN R D + + + + + K C F + Y+ + A R
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE-LMISKDC-FPNVVTYSTLIKGFCKAKR 413
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ + +E +M + T+ +++ A+ Q ++ +GV + NI
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC+NG L A V + + EP++ TY+ ++ G+C+ G VE+ + L + +G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + + +N +ISG ++G EE LL++MK G PNS +Y ++ L +
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 324 ELVGRM 329
EL+ M
Sbjct: 594 ELIKEM 599
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 136/322 (42%), Gaps = 23/322 (7%)
Query: 70 DPISVISVLNQYSKRK---------------DYNPNEALYTLIINKL---AQAKRFDAIE 111
D +++ S+LN Y K Y P+ +T +I+ L +A A+
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
D M V++ C+ D Y + G I A+ L M V +N +++
Sbjct: 212 DQM----VQRGCQ-PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L K + ++T G+ D + L+ LC G A +L + ++ P
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
NV T+S L+ ++G + EA L + M ID D T++ LI+G +++E +
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
E M K C+PN +Y ++ G KR E EL M + + V+Y LIHG
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 352 KLVEDVDWVLKKMVQQGFVPRM 373
+ ++ V K+MV G P +
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNI 468
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 113/238 (47%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RIS A+ + M P TF +++ L E + + G + D
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++ GLC+ G+++ A +L + K E +V Y+T++ GLC+ ++++A L M+++
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI D T++ LIS L G+ + +LL M + PN ++ ++ + + + EA
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++L MI + P +Y LI+G C +++ + + M+ + P + + ++
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 136/309 (44%), Gaps = 14/309 (4%)
Query: 73 SVISVLNQYSKRKD------------YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
S+IS L Y + D NPN ++ +I+ + + E + +
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+ D F Y+ + M R+ +A M S +C+P+V T++ ++ AK
Sbjct: 358 SI--DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E ++ ++ G+ + L+ G + + + A V + PN+ TY+ L+
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
GLC+ G + +A + E ++ ++ D T+NI+I G+ K GKVE+G +L + KG
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
PN +Y ++ G K EA L+ +M + P+ +Y LI E +
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595
Query: 361 LKKMVQQGF 369
+K+M GF
Sbjct: 596 IKEMRSCGF 604
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 89/197 (45%), Gaps = 3/197 (1%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N YT +I+ QA+ D + + +++ + + YN++ G+++KA+
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMV--SVGVHPNILTYNILLDGLCKNGKLAKAMV 489
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+ P + T+N+++ + A + ++ + + GV + N ++ G C
Sbjct: 490 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFC 549
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
G+ E A +L + + PN TY+TL+ G+ E + L++ M S G D
Sbjct: 550 RKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 609
Query: 270 TFNILISGLRKQGKVEE 286
T L++ + G++++
Sbjct: 610 TIG-LVTNMLHDGRLDK 625
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 112/231 (48%), Gaps = 1/231 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G KA E M C + +N +L L E VE DA
Sbjct: 227 GDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTY 286
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+I ++ C+ N+ +AF VLD+ + N PNV TY+ ++ LC+ VEEA+ LL+ M S
Sbjct: 287 SIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMIS 346
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ DT ++N + + +V +KL+ RM+ C+P+ +Y VL L+ RF +
Sbjct: 347 SGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDK 406
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQK-LVEDVDWVLKKMVQQGFVP 371
A E+ M ++ PS +Y +IHGLC +K +E+ M+ +G P
Sbjct: 407 ATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPP 457
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 105/225 (46%), Gaps = 11/225 (4%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYT------SAAKLGVEIDACCLNILLKGLCENGNLE 215
SV++F++++ +L +K + + S+ K+ EI + +G +
Sbjct: 106 SVQSFHILVEILGRSKQFAILWDFLIETRESDSSCKITNEIFWIIFTAYSRADLPDGAIR 165
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
+ F +DEF +P++ L++ LC+K +V +A ++++S + T T++ILI
Sbjct: 166 S-FVRMDEF---GIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFL-LTTKTYSILI 220
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+G K G + +L + M +GC+ + +Y +L L EA + + M+ +++
Sbjct: 221 NGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVE 280
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P +Y I C+ V VL KM + +P + + I+
Sbjct: 281 PDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCII 325
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 9/196 (4%)
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF 166
D + D++ + KVE D F Y++ I+ Y + A + A L M N P+V T+
Sbjct: 269 DFLNDMLSK-KVE-----PDAFTYSIFIRSYCD-ANNVHSAFGVLDKMRRCNLLPNVFTY 321
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
N ++ L K E + G++ D N + C++ + A ++ K
Sbjct: 322 NCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEK 381
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL-RKQGKVE 285
C P+ TY+ ++ L G ++A + E M + T++++I GL +K+GK+E
Sbjct: 382 DVCFPDRHTYNMVLKLLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLE 441
Query: 286 EGMKLLERMKGKGCYP 301
E K M +G P
Sbjct: 442 EACKYFAMMIDEGIPP 457
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 134/283 (47%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+E + ++IN L++ + ++Q + L R S + YN + G + +A+
Sbjct: 270 PSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGL-RVSP-YTYNPLICGYCKKGLLVEAL 327
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M + P+V + N ++ + + + K + D N L+ G
Sbjct: 328 ALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGF 387
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C GN+ AF +LDE +N N+ TY+TL+ GLC G++E A L E M + GI D
Sbjct: 388 CRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDV 447
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ +L++G K G + + + M G P+ +Y + G L +A +L
Sbjct: 448 VTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEE 507
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + P ++Y ++GLC +E+ +L+KM++ G VP
Sbjct: 508 MLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVP 550
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 99/189 (52%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P VK N +L +L L + +Y + G+ N +L C+ G ++ A +
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL 259
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ + ++ C P+ T++ L++GL +KG +++A GL++ M G+ T+N LI G K
Sbjct: 260 VPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCK 319
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G + E + L E M +G P AS+ ++YG + + +A++ + M+ + + P +S
Sbjct: 320 KGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIIS 379
Query: 341 YKKLIHGLC 349
Y LI+G C
Sbjct: 380 YNTLIYGFC 388
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 41/268 (15%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++S A + L DM N P + ++N ++ GE + + +
Sbjct: 356 GKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTY 415
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV------------ 249
N L+ GLC G+LE A + ++ + P+V TY+ L++G C+ GN+
Sbjct: 416 NTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLH 475
Query: 250 -----------------------EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+AF L E M ++G D +T+N+ ++GL K G +EE
Sbjct: 476 VGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEE 535
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+LL++M G P+ +Y ++ ++ E +E+ M+ +P+ V+Y LIH
Sbjct: 536 AGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIH 595
Query: 347 GLCNQKLVEDVDWVLK---KMVQQGFVP 371
L +DW + +M ++G VP
Sbjct: 596 A---HALNGRLDWAMAYFLEMQEKGVVP 620
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 6/240 (2%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACC 200
+ KA+E M Y P+V T+N +L+ GE+Q K+ G
Sbjct: 218 LVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKG---GEVQRALDLVPKMQERGCYPSEVT 274
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ GL + G L+ A ++ E K + TY+ L+ G C+KG + EA L E M
Sbjct: 275 FNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMV 334
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ G+ + N ++ G K+GK+ + + L M K P+ SY ++YG
Sbjct: 335 TRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIG 394
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA L+ + +S + V+Y LI GLC +E + + M+ +G P + + +V
Sbjct: 395 EAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLV 454
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +LK L + L A V + P V TY+T++H C+ G V+ A L+ +M+
Sbjct: 206 NRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQE 265
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G VTFN+LI+GL K+G++++ L++ M G + +Y ++ G K E
Sbjct: 266 RGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVE 325
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A L M+ +SP+ S+ +++G C + + D L M+++ +P
Sbjct: 326 ALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMP 375
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 10/277 (3%)
Query: 88 NPNEALYTLIIN---KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GR 143
+P+ YT+++N KL D M + + D F Y +I G + G
Sbjct: 444 HPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLA-----PDQFAYTA-RIVGELKLGD 497
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+KA + +M + P V T+N+ +N L E + + G D
Sbjct: 498 TAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTS 557
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+ ENG+L + + + P V TY+ L+H G ++ A M+ +G
Sbjct: 558 FMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKG 617
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + +T+N+LI+G K K+++ K M+ KG +PN +Y ++ + ++ EA
Sbjct: 618 VVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEAL 677
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
L +M+ +R+ P ++ L+ L V+ V ++
Sbjct: 678 RLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQFI 714
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 77/155 (49%)
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
V ++ + P+V+ + ++ L +K + +A + M GI T+N ++
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
K G+V+ + L+ +M+ +GCYP+ ++ ++ GL K +AK L+ M + S
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+Y LI G C + L+ + + ++MV +G P +
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVA 343
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 37/292 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I L Q RFD + +++++++++
Sbjct: 229 PNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQR--------------------------- 261
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
S +CW T+ V++ L G + A GV ++ N L+ G
Sbjct: 262 ------HSPDCW----TYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGY 311
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ G+++AA VL + P V+T++ ++HG C G V +A L +M G+ +T
Sbjct: 312 CKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNT 371
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VTFN LISG G+ + ++LL+ M+ G P+ +Y + L D+ + EA L
Sbjct: 372 VTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSC 431
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + V Y L+HG C ++ +++KM + +P + + ++
Sbjct: 432 LPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLI 483
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 115/245 (46%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D + Y ++ AGRI A M C P V T+ ++L+ L + GE + +
Sbjct: 160 DRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALL 219
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
GV + N L+ GLC+ G + +L++ Q P+ TY+ ++HGLC+
Sbjct: 220 GEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKH 279
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G V +L +G+ + +T+N LI+G K G ++ + +L+ MK P ++
Sbjct: 280 GKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTF 339
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
EV++G + +A + +M +SP+ V++ LI G C+ + +L M +
Sbjct: 340 NEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEE 399
Query: 367 QGFVP 371
G +P
Sbjct: 400 YGVLP 404
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 122/239 (51%), Gaps = 2/239 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK-LGVEIDACCLNILLKGLCENGNLEAAFY 219
P T+N ++ L A L G++ + G D IL+KGLC G ++ A
Sbjct: 123 PDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACR 182
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
V + + C P V TY+ L+ GLC+ V EA LL M ++G+ + VT+N LI GL
Sbjct: 183 VFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLC 242
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
++G+ ++ KLLE+M+ + P+ +Y +V++GL + +++ I + ++ +
Sbjct: 243 QEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVL 302
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTE 397
+Y LI+G C ++ VL+ M + P + + E++ G GK ++ ++T+
Sbjct: 303 TYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQ 361
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 136/294 (46%), Gaps = 14/294 (4%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF--FYNVIKIYGNMAGRISKAIETL 151
Y +IN + A D++Q +K R + G F VI + G++ KA+ L
Sbjct: 304 YNALINGYCKGGDMKAALDVLQLMKRN---RVNPGVQTFNEVIHGF-CCGGKVHKAMAFL 359
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
M P+ TFN +++ S + + GV D I + LC+
Sbjct: 360 TQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDE 419
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G LE A + P + + + Y++L+HG C+ G+++ AFGL+E+M SE D T+
Sbjct: 420 GQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTY 479
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N LI GL K +++ + LL++MK +G P + ++ ++ +L K+ +A ++ +MI
Sbjct: 480 NTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMIS 539
Query: 332 ERMSPSFVSYKKLI-----HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P +Y I G + E++D + +M + G P + + I+
Sbjct: 540 SGCKPDKQTYTLKISTDWFEGATKE---ENIDMAVVEMHEAGVFPDVETYNAII 590
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 2/204 (0%)
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ + K G + C N L+ C+ L A L + P+ TY+ LM GLC
Sbjct: 78 FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137
Query: 246 KGNVEEAFGLLERMESE-GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
G + A GL +M G D ++ ILI GL G++++ ++ +M C P
Sbjct: 138 AGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVH 197
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y +L GL +R EA+ L+G M+ + + P+ V+Y LI GLC + +DV +L+KM
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257
Query: 365 VQQGFVPRMGMWREIV-GCVTFGK 387
Q P + ++V G GK
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGK 281
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 24/313 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y + I+ L + + + + ++ + + + + +++ Y + G I A
Sbjct: 404 PDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGI-KAHNVIYTSLVHGYCQV-GDIDSAF 461
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M S NC P V T+N +++ L K + K G+E C NIL+K +
Sbjct: 462 GLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQM 521
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYS-----TLMHGLCEKGNVEEAFGLLERMESEG 263
+ A + ++ C+P+ +TY+ G ++ N++ A + M G
Sbjct: 522 LWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMA---VVEMHEAG 578
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL---DKKRFP 320
+ D T+N +I G E+ +M P+ +Y +L + D F
Sbjct: 579 VFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFD 638
Query: 321 EAK-----------ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
K EL +M +P +YK L+ GLCNQ +E+V+W+L KM
Sbjct: 639 NEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSI 698
Query: 370 VPRMGMWREIVGC 382
+ M ++GC
Sbjct: 699 LLDEDMSDYLLGC 711
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 121/346 (34%), Gaps = 88/346 (25%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL----CRFS--------DGFFYNVIKI 136
P+ Y +I+ L + KR D D++ ++K + + C F+ D + K+
Sbjct: 474 PDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKM 533
Query: 137 YGNMAGRISKAIETLFDMPSYNCW-----------------------PSVKTFNLVLNLL 173
Y M K + + + W P V+T+N ++
Sbjct: 534 YEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAY 593
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCL--NILLKGLCENGNLEA----------AFYVL 221
V A L + + + L V ID C +ILL +C + +A L
Sbjct: 594 VDAGL--KEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNL 651
Query: 222 DEFPKQNCE----PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
E +Q CE P + TY L+ GLC + +EE LL +M+ I D + L+
Sbjct: 652 QELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLL-- 709
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
GCY N Y+ EA E M + P
Sbjct: 710 --------------------GCYCNLEMYR-------------EACEQFRSMAHQSFQPG 736
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
S L+ GLC+ + M+ G+ +W+ ++ C+
Sbjct: 737 LKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCL 782
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D P + Y ++ L R + +E ++ +++ + D Y ++ Y N+
Sbjct: 662 DAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDY-LLGCYCNLE-MYR 719
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A E M + P +K+ L+L+ L + +G I++ LG D +L+
Sbjct: 720 EACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLI 779
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
L E G+ A +L + C + RTY++L+
Sbjct: 780 DCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLV 814
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 139/296 (46%), Gaps = 6/296 (2%)
Query: 87 YNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRI 144
Y P+ + ++N +KR DA+ + Q +++ D F + + I+G + +
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK---PDTFTFTTL-IHGLFLHNKA 204
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S+A+ + M C P + T+ V+N L + ++ + N +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ LC+ ++E A + E + PNV TY++L++ LC G +A LL M + I
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ + VTFN LI K+GK+ E KL E M + P++ +Y ++ G R EAK+
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ M+ + P+ +Y LI+G C K VED + ++M Q+G V + I+
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ A++ DM +PS+ FN +L+ + + + + LG+ D +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I + C L A VL + K EP++ T S+L++G C + +A L+++M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G DT TF LI GL K E + L+++M +GC P+ +Y V+ GL + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M R+ + V + +I LC + VE + +M +G P + + ++ C
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 383 V 383
+
Sbjct: 303 L 303
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 143/283 (50%), Gaps = 2/283 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +++ +A+ +F+ + + ++++ + D + Y++ ++S A+
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH--DLYTYSIFINCFCRRSQLSLAL 138
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M P + T + +LN +K + + ++G + D L+ GL
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ A ++D+ ++ C+P++ TY T+++GLC++G+++ A LL +ME+ I A+
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V FN +I L K VE + L M+ KG PN +Y ++ L + R+ +A L+
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ ++++P+ V++ LI + + + + + ++M+Q+ P
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 157/358 (43%), Gaps = 49/358 (13%)
Query: 70 DPISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIM 114
D ++ +V+N KR D + N ++ II+ L + + + D+
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
++ + + R + + ++I N GR S A L +M P+V TFN +++
Sbjct: 282 TEMETKGI-RPNVVTYNSLINCLCNY-GRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E + ++ + ++ D N+L+ G C + L+ A + ++C PN++
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
TY+TL++G C+ VE+ L M G+ +TVT+ +I G + G + + ++M
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 295 KGKGCYPNSASYQEVLYGL-----LDKK----RFPEAKEL-------------------V 326
+ +Y +L+GL LD ++ + E+ V
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Query: 327 GR---MICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
G + C + P V+Y +I GLC+++L+++ D + +KM + G +P G + ++
Sbjct: 520 GEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+++ +N + KLG E D L+ LL G C + + A ++D+
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ +P+ T++TL+HGL EA L+++M G D VT+ +++GL K+G +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ + LL +M+ N + ++ L + A +L M + + P+ V+Y L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
I+ LCN D +L M+++ P + + ++
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 143/338 (42%), Gaps = 26/338 (7%)
Query: 70 DPISVISVLNQYSKRK---------------DYNPNEALYTLIINKL---AQAKRFDAIE 111
D +++ S+LN Y K Y P+ +T +I+ L +A A+
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
D M V++ C+ D Y + G I A+ L M + +V FN +++
Sbjct: 212 DQM----VQRGCQ-PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L + ++T G+ + N L+ LC G A +L ++ P
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
NV T++ L+ ++G + EA L E M ID DT+T+N+LI+G +++E ++
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ M K C PN +Y ++ G KR + EL M + + V+Y +I G
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV--GCVTFGK 387
+ V K+MV VP M I+ G ++GK
Sbjct: 447 GDCDSAQMVFKQMVSNR-VPTDIMTYSILLHGLCSYGK 483
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 139/295 (47%), Gaps = 23/295 (7%)
Query: 85 KDYNPNEALYTLIIN------KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG 138
K NPN + +I+ KL +A++ E+++QR ++ D YN++
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLH--EEMIQR-SID-----PDTITYNLLINGF 373
Query: 139 NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
M R+ +A + M S +C P+++T+N ++N K + ++ ++ G+ +
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
+++G + G+ ++A V + ++ TYS L+HGLC G ++ A + +
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
++ ++ + +N +I G+ K GKV E L + K P+ +Y ++ GL K+
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRL 550
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHG---LCNQKLVEDVDWVLKKMVQQGFV 370
EA +L +M + P+ +Y LI C++ + ++K+M GFV
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE---LIKEMRSSGFV 602
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-GRISKAI 148
N YT II QA D+ + + +++ ++ +D Y+++ ++G + G++ A+
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP--TDIMTYSIL-LHGLCSYGKLDTAL 488
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ ++ +N ++ + A GE ++ S L ++ D N ++ GL
Sbjct: 489 VIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS---LSIKPDVVTYNTMISGL 545
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C L+ A + + + PN TY+TL+ + + L++ M S G D
Sbjct: 546 CSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDA 605
Query: 269 VTFNILISGLRKQGKVEE 286
T + L++ + G++++
Sbjct: 606 STIS-LVTNMLHDGRLDK 622
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 110/230 (47%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ + ++ + +M P+ TF VL + + + VE D
Sbjct: 313 GKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIY 372
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
IL+ G G +E A V + K+ PNV TY+ L+ G G+ A GLL+ M+
Sbjct: 373 TILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI+AD VT+N+LI L +G+V + +KLL+ M G PN +Y ++ G DK
Sbjct: 433 KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKS 492
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A E+ RM R + V+Y I C +++ + +L +M+ + VP
Sbjct: 493 AYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 104/237 (43%), Gaps = 16/237 (6%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P + TFN V++ L + + G+ N L+ G C+ G ++V
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248
Query: 221 ---LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
L E + P T+ L++G C+ N A + E M+ +GI A VT+N LISG
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L +GKVEEG+KL+E M+ G PN ++ VL G K +A + + M + P
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-------------RMGMWREIVG 381
V Y LI G +ED V + M ++G P R G WR G
Sbjct: 369 VVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASG 425
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 138/332 (41%), Gaps = 40/332 (12%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
+ P+ + ++ L AKR D E + ++ D + +N + G++ K
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVS--PDIYTFNTVISGLCRIGQLRK 209
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG---EIQGIYTSAAKLGVEIDACCLNI 203
A + D+ ++ PSV T+N +++ G + + + G+ A +
Sbjct: 210 AGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGV 269
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C+N N AA V +E +Q +V TY++L+ GLC +G VEE L+E ME G
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 264 -----------------------------------IDADTVTFNILISGLRKQGKVEEGM 288
++ D V + ILI G R+ GK+E+ M
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAM 389
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ E M KG PN +Y ++ G + A L+ M + + V+Y LI L
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C + V +L +M + G P + I+
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTII 481
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 10/240 (4%)
Query: 88 NPNEALYTLIINKLAQ----AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+PNE + ++ + A D I+ + +R VE D Y ++ G+
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTER-NVE-----PDVVIYTILIDGYRRLGK 384
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ M P+V T+N ++ + + G+ + G+E D N+
Sbjct: 385 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ LC G + A +LDE + EPN TY+T++ G C+KGN++ A+ + RME
Sbjct: 445 LIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCR 504
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
A+ VT+N+ I + GK++E LL M K PN +Y+ + G+++K P+ +
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIR 564
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 103/216 (47%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G ++ A + + M N P V + ++++ + + + AK G+ +
Sbjct: 348 GMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTY 407
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G +G+ +A +LDE ++ E +V TY+ L+ LC KG V +A LL+ M
Sbjct: 408 NCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G++ + +T+N +I G +G ++ ++ RM+ N +Y + + E
Sbjct: 468 VGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDE 527
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
A +L+ M+ + + P+ ++Y+ + G+ + D+
Sbjct: 528 ANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDI 563
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 8/182 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K +PN Y +I +++ + + ++ +K + + +D YNV+ G
Sbjct: 397 KKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI--EADVVTYNVLIGALCCKGE 454
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY---TSAAKLGVEIDACC 200
+ KA++ L +M P+ T+N ++ G I+ Y T K +
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDK---GNIKSAYEIRTRMEKCRKRANVVT 511
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+ +K C+ G ++ A +L+E + PN TY T+ G+ EKG + G
Sbjct: 512 YNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRGCTVSQA 571
Query: 261 SE 262
SE
Sbjct: 572 SE 573
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 124/260 (47%), Gaps = 2/260 (0%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
A Y L+++ L R +++ ++ D F YN++ G KA+E
Sbjct: 255 ATYNLLMHALFMDARASDAYAVLEEMQKNGFS--PDVFTYNILINGYCKEGNEKKALEVF 312
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+M + T+ ++ + E ++ A K G+ D N L+ C
Sbjct: 313 EEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTG 372
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G++E A+ ++ E K+ P+ TY+TLM G C G ++EA L++ M GI D V++
Sbjct: 373 GDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSY 432
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N LISG +G +++ +++ + M KG P +Y ++ GL ++ +A+ L+ M+
Sbjct: 433 NTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVA 492
Query: 332 ERMSPSFVSYKKLIHGLCNQ 351
+ ++P +Y LI GL +
Sbjct: 493 KGITPDDSTYISLIEGLTTE 512
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 144/334 (43%), Gaps = 36/334 (10%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ + V+ + +R P++ Y +I+ + R + + + + S +
Sbjct: 165 AALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNA 224
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
+I Y ++ G++ A++ DM +V T+NL+++ L + + K
Sbjct: 225 LIGGYCDV-GKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKN 283
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFP--------------------------- 225
G D NIL+ G C+ GN + A V +E
Sbjct: 284 GFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQET 343
Query: 226 --------KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
K+ P+V Y+ L++ C G++E A+ ++ ME + I D +T+N L+ G
Sbjct: 344 DRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRG 403
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
G+++E L++ M +G P+ SY ++ G K +A + M+ + +P+
Sbjct: 404 FCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPT 463
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++Y LI GLC + +D + ++K+MV +G P
Sbjct: 464 LMTYNALIQGLCKIRQGDDAENLMKEMVAKGITP 497
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 145/340 (42%), Gaps = 31/340 (9%)
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
P+ + +L Q + PN Y +I R A ++M+ ++ E+ D +
Sbjct: 132 PVRALELLRQMPR-----PNAVTYNTVIAGFCARGRVQAALEVMREMR-ERGGIAPDKYT 185
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
Y + GR+ A++ +M + + SA +Y + G Y
Sbjct: 186 YATLISGWCKIGRMEDAVKVFDEMLTKG------------EVAPSAVMYNALIGGYCDVG 233
Query: 191 KL-------------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
KL G+ + N+L+ L + A+ VL+E K P+V TY+
Sbjct: 234 KLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYN 293
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
L++G C++GN ++A + E M +G+ A VT+ LI ++G+V+E +L K
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G P+ Y ++ A E++ M +R+ P ++Y L+ G C +++
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEA 413
Query: 358 DWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTE 397
++ +M ++G P + + ++ + D ++ + V +
Sbjct: 414 RTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRD 453
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 10/211 (4%)
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
V + + +L+ L SA + IY +L + + NI+L+ LC G A +L
Sbjct: 85 VASLHPLLSSLPSAPAFALFADIY----RLRLPLCTTTFNIMLRHLCATGKPVRALELLR 140
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFNILISGLRKQ 281
+ P+ PN TY+T++ G C +G V+ A ++ M E GI D T+ LISG K
Sbjct: 141 QMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKI 196
Query: 282 GKVEEGMKLLERMKGKG-CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G++E+ +K+ + M KG P++ Y ++ G D + A + M+ ++ + +
Sbjct: 197 GRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVAT 256
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y L+H L D VL++M + GF P
Sbjct: 257 YNLLMHALFMDARASDAYAVLEEMQKNGFSP 287
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+H L AF L + + T TFNI++ L GK ++LL +M
Sbjct: 88 LHPLLSSLPSAPAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMP---- 143
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICER--MSPSFVSYKKLIHGLCNQKLVEDV 357
PN+ +Y V+ G + R A E++ R + ER ++P +Y LI G C +ED
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVM-REMRERGGIAPDKYTYATLISGWCKIGRMEDA 202
Query: 358 DWVLKKMVQQGFV-PRMGMWREIVG 381
V +M+ +G V P M+ ++G
Sbjct: 203 VKVFDEMLTKGEVAPSAVMYNALIG 227
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 13/286 (4%)
Query: 118 KVEKLCRFSD-----GFFYNVIKIYGNMAGRISK------AIETLFDMPSYNCWPSVKTF 166
+V+K F D GF N + YG + + K AI+ L + + +V +
Sbjct: 137 EVQKSVHFHDKVVAQGFQMNQVS-YGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMY 195
Query: 167 NLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK 226
N +++ L KL E Y+ G+ + L+ G C G L AF +L+E
Sbjct: 196 NTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMIL 255
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
+N PNV TY+ L+ LC++G V+EA LL M G AD VT+ L+ G K +++
Sbjct: 256 KNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDK 315
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
L +MK G PN +Y ++ GL R +A++L ++ + +Y +I
Sbjct: 316 ATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIG 375
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNR 392
GLC + ++++ + KM G +P + + I+ + F KD ++
Sbjct: 376 GLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSL-FKKDENDK 420
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 121/250 (48%), Gaps = 12/250 (4%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK---IYGN--MAGRI 144
N +Y II+ L + K + D + G F NVI + G +AG++
Sbjct: 191 NVVMYNTIIDGLCKDKLVNEAYDFYSEMNAR-------GIFPNVITYTTLIGGFCLAGQL 243
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ A L +M N P+V T+ ++++ L E + + G D L
Sbjct: 244 TGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSL 303
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L G C+N NL+ A + + + +PN TY+ L+ GLC+ G +++A L + + +G
Sbjct: 304 LDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGC 363
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D T+N++I GL K+G ++E + + +M+ GC PN +++ ++ L K +A++
Sbjct: 364 CIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEK 423
Query: 325 LVGRMICERM 334
L+ MI + +
Sbjct: 424 LLHEMIAKGL 433
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 6/238 (2%)
Query: 137 YGNMAGRISK------AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
+G + G ++K AI M P++ T N+++N +
Sbjct: 55 FGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKIL 114
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
KLG + + L L+KGLC G ++ + + D+ Q + N +Y TL++GLC+ G
Sbjct: 115 KLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETR 174
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A L +E + V +N +I GL K V E M +G +PN +Y ++
Sbjct: 175 CAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLI 234
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
G + A L+ MI + ++P+ +Y LI LC + V++ +L +M +G
Sbjct: 235 GGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRG 292
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ AI M + P + F +L L K Y + G+E + LNI
Sbjct: 33 VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ C G + +F VL + K +PN T +TLM GLC KG V+++ +++ ++G
Sbjct: 93 LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ V++ L++GL K G+ +K L ++ N Y ++ GL K EA
Sbjct: 153 FQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAY 212
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ M + P+ ++Y LI G C + +L +M+ + P +
Sbjct: 213 DFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNV 262
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 140/334 (41%), Gaps = 13/334 (3%)
Query: 38 ASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLI 97
ASH + H Y T ++ ++ RD ++ + + NEA++ I
Sbjct: 159 ASHIKPNVHIY----------TSLIHAYAEARDMEGAVACTEEMLS-QGIQLNEAVFCSI 207
Query: 98 INKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY 157
I+ A A +A E ++ K E L G YN I AG + L M
Sbjct: 208 ISGYASAGNNEAAEHWFEKFKAENL--VPGGIVYNSIVQAYCQAGNMETVEALLAQMEEE 265
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
++ + VLN + + + G+ A ++K + GN+ A
Sbjct: 266 GFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKA 325
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+L+E K PN Y+ +M G G+ AF + E M S G+ D VT+NIL+
Sbjct: 326 LDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHA 385
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
K G++++ + +LE ++ P +Y +L G + +A E+ R+ + P
Sbjct: 386 FCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPG 445
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
VSY L+ GL + +E+ +L +M+ G VP
Sbjct: 446 VVSYNSLLSGLAKARQMENARLMLDEMLANGVVP 479
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 155/338 (45%), Gaps = 8/338 (2%)
Query: 37 SASHQDSDHHAYKLNHKDWLSP-----TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNE 91
SA + ++ H ++ + L P +++ + + +V ++L Q + + + N
Sbjct: 213 SAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQM-EEEGFQGNL 271
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL 151
LYT ++N A+ + + R+K L + + ++K++ AG ++KA++ L
Sbjct: 272 GLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSP-TAATYGCIVKLF-TKAGNMAKALDIL 329
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
+M + P+ + ++++ + ++ G++ D NIL+ C+
Sbjct: 330 EEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKA 389
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
G ++ A VL+ P + TY++++ G + G++++A + +R+++ G+ V++
Sbjct: 390 GRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSY 449
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
N L+SGL K ++E +L+ M G PN SY + G +A + RM
Sbjct: 450 NSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKK 509
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
E ++ V+Y L+ C ++ V +++ G
Sbjct: 510 ENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGL 547
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 141/317 (44%), Gaps = 8/317 (2%)
Query: 56 LSPTE-----VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
LSPT ++K+F+ + + +L + K +PN+ +Y +I++ A+ F A
Sbjct: 302 LSPTAATYGCIVKLFTKAGNMAKALDILEEMDKH-GVSPNKMIYAMIMDGYARGGDFTAA 360
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
+ + + L D YN++ AGR+ KA+ L ++ + P+++T+ +L
Sbjct: 361 FKVWEDMVSAGL--KPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSIL 418
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
+ V + ++ G+ N LL GL + +E A +LDE
Sbjct: 419 DGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVV 478
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
PN R+Y+ L G G+VE+AFG+ +RM+ E + D V + L+ K G ++ +++
Sbjct: 479 PNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEV 538
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
+++ G N +Y +L G K +A++L+ M + Y I
Sbjct: 539 FQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFR 598
Query: 351 QKLVEDVDWVLKKMVQQ 367
E+V L M ++
Sbjct: 599 SGDTEEVTETLAVMREK 615
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 134/313 (42%), Gaps = 7/313 (2%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
T VL F+ +RD +S ++ K +P A Y I+ +A DI++ +
Sbjct: 275 TTVLNGFAEIRDEEKCLSFFHRL-KACGLSPTAATYGCIVKLFTKAGNMAKALDILE--E 331
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
++K + Y +I G + A + DM S P + T+N++++ A
Sbjct: 332 MDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGR 391
Query: 179 YGEIQGIYTS--AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ G+ + A +L I+ +L G + G+++ A V D P V +Y
Sbjct: 392 MDKALGVLENIQANRLLPTIET--YTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSY 449
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
++L+ GL + +E A +L+ M + G+ + ++ L G + G VE+ + +RMK
Sbjct: 450 NSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKK 509
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+ + +Y +L A E+ ++ + + ++Y ++ G + +
Sbjct: 510 ENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSK 569
Query: 357 VDWVLKKMVQQGF 369
+LK M + GF
Sbjct: 570 ARDLLKDMQKHGF 582
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 82/179 (45%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N +++ C+ GN+E +L + ++ + N+ Y+T+++G E + E+ R+++
Sbjct: 240 NSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKA 299
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ T+ ++ K G + + + +LE M G PN Y ++ G F
Sbjct: 300 CGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTA 359
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A ++ M+ + P V+Y L+H C ++ VL+ + +P + + I+
Sbjct: 360 AFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSIL 418
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 2/190 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PNE YT + A+A + + QR+K E L D Y + +G + +A+
Sbjct: 479 PNERSYTALTEGYARAGDVEKAFGMFQRMKKENLA--IDIVAYGALLKACCKSGAMQRAV 536
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E + + T+ +L+ + + + K G +D C +K
Sbjct: 537 EVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKAC 596
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+G+ E L ++ E N RTY+TL+HG + ++A E+ ++ G+ D+
Sbjct: 597 FRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDS 656
Query: 269 VTFNILISGL 278
N L+SGL
Sbjct: 657 ALSNCLLSGL 666
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 68/179 (37%), Gaps = 35/179 (19%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+L+ +G+ AA + + +PNV Y++L+H E ++E A E M S
Sbjct: 135 GLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLS 194
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI + F +ISG G E E+ K
Sbjct: 195 QGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKA------------------------- 229
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E + P + Y ++ C +E V+ +L +M ++GF +G++ ++
Sbjct: 230 ----------ENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVL 278
>gi|255661006|gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 376
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 130/262 (49%), Gaps = 2/262 (0%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN + AGR+ E L++M SV +FN+++ L + E I+
Sbjct: 24 DAVVYNAMLNGFYRAGRMKDCFE-LWEMMGREGSRSVASFNIMMRGLFDNRKVEEAMSIW 82
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
K G D+ IL+ G C+NG + + ++L+ ++ + YS +++ LC++
Sbjct: 83 ELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIAEQKGGVLDAFAYSAMINALCKE 142
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+E+A +L M G +T +N LI GL K ++ +++ M C PN A+Y
Sbjct: 143 SKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTTDCPPNIATY 202
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ GL +RF EA +LV M+ + ++PS ++Y L+ GLC VE + ++ +
Sbjct: 203 SILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQVTK 262
Query: 367 QGFVPRMGMWREIV-GCVTFGK 387
+GF P + M ++ G + GK
Sbjct: 263 KGFKPDVQMHNILIHGLCSVGK 284
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 104/245 (42%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F Y+ + ++ KA+ L M C P+ +N ++ L+ A + I+
Sbjct: 128 DAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKRDDAVRIF 187
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ +IL+ GLC+ A+ ++ E ++ P+V TYS LM GLC
Sbjct: 188 REMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLG 247
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
VE A L ++ +G D NILI GL GK + + L M C PN +
Sbjct: 248 HKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQ 307
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ G A + R++ + P +SY + GLC+ + D W L V+
Sbjct: 308 NTLMEGFYKDGNVRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAIWFLHDAVR 367
Query: 367 QGFVP 371
+ +P
Sbjct: 368 KKIIP 372
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 117/248 (47%), Gaps = 4/248 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK-IYGNMAGRISKAIETLF 152
Y+ +IN L + + + ++ + + C+ + + +IK + G A + A+
Sbjct: 132 YSAMINALCKESKLEKAVSVLNGM-IRSGCKPNTHVYNALIKGLIG--ASKRDDAVRIFR 188
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M + +C P++ T++++++ L + +GE + + G+ ++L+KGLC
Sbjct: 189 EMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGH 248
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+E A + ++ K+ +P+V+ ++ L+HGLC G + A L M + VT N
Sbjct: 249 KVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQN 308
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
L+ G K G V + + R+ P+ SY L GL R +A + + +
Sbjct: 309 TLMEGFYKDGNVRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAIWFLHDAVRK 368
Query: 333 RMSPSFVS 340
++ P+ ++
Sbjct: 369 KIIPTKIT 376
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 39/217 (17%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
D PN A Y+++I+ L + +RF G Y+++K
Sbjct: 194 DCPPNIATYSILIDGLCKGERF--------------------GEAYDLVK---------- 223
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVL-NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+M PSV T++L++ L + K+ +Q ++ K G + D NIL
Sbjct: 224 -------EMLEKGLNPSVITYSLLMKGLCLGHKVEMALQ-LWNQVTKKGFKPDVQMHNIL 275
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC G + A + + + NC PN+ T +TLM G + GNV A + R+ +
Sbjct: 276 IHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMEGFYKDGNVRNALVIWARILKNEL 335
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
D +++NI + GL ++ + + L K P
Sbjct: 336 QPDIISYNITLKGLCSCNRISDAIWFLHDAVRKKIIP 372
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 150/305 (49%), Gaps = 8/305 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
LR+ + V++++ ++ PN + I+ L A + ++R+++ L +
Sbjct: 134 LRNAMQVLTMM----QKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQL--LGIMPN 187
Query: 128 GFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
YN +IK Y ++ R+ A+E + +MP C P ++ V+ L + E+ +
Sbjct: 188 VVTYNCLIKGYCDLH-RVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVI 246
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ D N L+ LC++ + + A L E K+ + + YS ++ C++
Sbjct: 247 EKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKE 306
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G +++A ++ M + G D VT+ +I+G + G+V + K+L++M GC PN+ SY
Sbjct: 307 GRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSY 366
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
L GL K EA+E++ + +P+ ++Y ++HG + + D V+++M+
Sbjct: 367 TAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIG 426
Query: 367 QGFVP 371
+GF P
Sbjct: 427 KGFFP 431
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 111/239 (46%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ +A E + +M + C P V T+ ++N A G+ + + K G + +
Sbjct: 307 GRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSY 366
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
LKGLC+ GN A ++ +Q PN TYS +MHG +G + +A ++ M
Sbjct: 367 TAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIG 426
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G V N+L+ L + G+V+E K +E GC N+ ++ V++ +
Sbjct: 427 KGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEA 486
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A L+ M P V+Y +I L + +E+ + KM+++G P +R ++
Sbjct: 487 ALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVI 545
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 108/231 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG++ A++ L M P++ N +++LV A + + LG+ +
Sbjct: 131 AGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVT 190
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+KG C+ +E A ++ E P + C P+ +Y T+M LC+ + E ++E+ME
Sbjct: 191 YNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKME 250
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ AD VT+N LI L K +E ++ L + +G + Y ++ + R
Sbjct: 251 DTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMD 310
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+AKE+V M P V+Y +I+G V +L++M + G P
Sbjct: 311 QAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKP 361
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 129/282 (45%), Gaps = 6/282 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL--CRFSDGFFYNVIKIYGNMAGRISK 146
PN Y +I R +ED M+ I L C +Y V+ RI +
Sbjct: 186 PNVVTYNCLIKGYCDLHR---VEDAMELISEMPLKGCSPDKVSYYTVMGFLCK-NRRIRE 241
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
++ + M T+N ++++L + E A K G ++D + ++
Sbjct: 242 VMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVD 301
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
C+ G ++ A +++E + C P+V TY+ +++G + G V +A +L++M G
Sbjct: 302 SYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKP 361
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+TV++ + GL ++G E ++++ + + PN+ +Y V++G + + +A ++V
Sbjct: 362 NTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVV 421
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
MI + P+ V L+ LC V++ +++ + G
Sbjct: 422 REMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMG 463
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 124/277 (44%), Gaps = 5/277 (1%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D ++ T ++ FS + +L Q K PN YT + L Q ++
Sbjct: 327 DVVTYTAIINGFSQAGEVGQARKMLQQMYKH-GCKPNTVSYTAFLKGLCQKGNSSEAREM 385
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
M+ E+ + Y+V+ G++S A + + +M +P+ NL+L L
Sbjct: 386 MK--ASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSL 443
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
E + +G ++A ++ C+ ++EAA +LD+ N P+
Sbjct: 444 CRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDA 503
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY+T++ L +KG +EEA L +M +GID VT+ +I + G+VE+ + LL++
Sbjct: 504 VTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDK 563
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
M + ++ +V+ L A +L+G+++
Sbjct: 564 MLTR--QECRTAFNQVIEKLCTFGNLEAADKLLGKVL 598
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN-----SASYQEVLYGLLDKK 317
GI F ++ + GK+ M++L M+ G PN +A + V+ +L+K
Sbjct: 113 GIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKA 172
Query: 318 -RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
RF E +L+G M P+ V+Y LI G C+ VED ++ +M +G P +
Sbjct: 173 LRFLERMQLLGIM------PNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSY 226
Query: 377 REIVGCVTFGKDNRNRVYVTETVD 400
++G + + R + V E ++
Sbjct: 227 YTVMGFLCKNRRIREVMDVIEKME 250
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 96/247 (38%), Gaps = 6/247 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P L++ L + R D + M+ + C + F VI + I
Sbjct: 427 KGFFPTPVEINLLLQSLCRIGRVDEAKKFMEEC-LNMGCAVNAVNFTTVIHRFCQQDD-I 484
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+ L DM N P T+ +++ L E + K G++ +
Sbjct: 485 EAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTV 544
Query: 205 LKGLCENGNLEAAFYVLDE-FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+ + G +E +LD+ +Q C ++ ++ LC GN+E A LL ++
Sbjct: 545 IHRYGQIGRVEDLLNLLDKMLTRQECRT---AFNQVIEKLCTFGNLEAADKLLGKVLRTA 601
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
D T ++L+ ++G K+ RM + P+ ++V L+ + + EA
Sbjct: 602 SRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEAD 661
Query: 324 ELVGRMI 330
L R +
Sbjct: 662 NLFLRFV 668
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 81/210 (38%), Gaps = 6/210 (2%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N +T +I++ Q +A ++ + + + D Y I GRI +A E
Sbjct: 467 NAVNFTTVIHRFCQQDDIEAALSLLDDMYLSN--KHPDAVTYTTIIDALGKKGRIEEATE 524
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA-CCLNILLKGL 208
M P+ T+ V++ G ++ + K+ + N +++ L
Sbjct: 525 LTLKMLKKGIDPTPVTYRTVIH---RYGQIGRVEDLLNLLDKMLTRQECRTAFNQVIEKL 581
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C GNLEAA +L + + + T LM KG A+ + RM S + D
Sbjct: 582 CTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDL 641
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKG 298
+ L ++GK EE L R +G
Sbjct: 642 KLCEKVCKKLMQEGKSEEADNLFLRFVERG 671
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+GR+ A E + M PS++ N +L L+ A + + G+ D
Sbjct: 187 SGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYT 246
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ L++ C+ + A VL E ++ C N TY+ L+ GLC G VEEAFG + ME
Sbjct: 247 YSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 306
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ D T+ LI+GL K + E LL+ M PN Y ++ G + +
Sbjct: 307 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 366
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA +++ M+ + P+ ++Y L+ GLC ++ +LK+MV+ P + I+
Sbjct: 367 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 426
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 147/324 (45%), Gaps = 6/324 (1%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
D ++++ + ++ +P+ Y+ +I + + FD + ++ ++ E+ C +
Sbjct: 223 DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMR-ERGCGL-NTV 280
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YNV+ +G + +A DM Y P T+ ++N L ++ E + +
Sbjct: 281 TYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM 340
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ ++ + L+ G GN + AF ++ E +PN TY L+ GLC+ G +
Sbjct: 341 SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQM 400
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+ A LL++M + DT+T+N++I G + ++ +LL M+ G PN +Y +
Sbjct: 401 DRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIM 460
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
++GL +A +L+ M + + P+ Y LI G C + V + KM +
Sbjct: 461 IHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 520
Query: 370 VPRMGMWREIVGCVTFGKDNRNRV 393
+P + + ++ FG RV
Sbjct: 521 LPDLYCYNSLI----FGLSKVGRV 540
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 140/321 (43%), Gaps = 35/321 (10%)
Query: 85 KDYN--PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKL-------CRFSDGFF----- 130
+DY P+ Y +IN L +++R + + ++ + +L DGF
Sbjct: 306 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 365
Query: 131 ---YNVIK------------IYGNMA------GRISKAIETLFDMPSYNCWPSVKTFNLV 169
+ +IK Y N+ G++ +A L M + P T+NL+
Sbjct: 366 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 425
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
+ + + + G+ + +I++ GLC++G E A +L+E +
Sbjct: 426 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 485
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+PN Y+ L+ G C +GNV A + ++M + D +N LI GL K G+VEE K
Sbjct: 486 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
+M+ +G PN +Y +++G L A++LV RM+ + P+ V Y L+
Sbjct: 546 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 605
Query: 350 NQKLVEDVDWVLKKMVQQGFV 370
+E V K M+ QG +
Sbjct: 606 KSDDIEKVSSTFKSMLDQGVM 626
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%)
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
++ + S GV +D IL+ L +GN+EAAF VL K P+V YS+L+
Sbjct: 612 KVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLI 671
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
GLC+ + E+AFG+L+ M +G+D + V +N LI GL K G + + + KG
Sbjct: 672 SGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV 731
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
PN +Y ++ G A L M+ ++P Y L G + +E ++
Sbjct: 732 PNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFL 791
Query: 361 LKKMVQQG 368
+++M +G
Sbjct: 792 IEEMFLRG 799
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 132/280 (47%), Gaps = 5/280 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIK-VEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN+ +Y I+ L + D IE + K + D Y ++ + +G + A
Sbjct: 592 PNDVIY---IDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA 648
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L + P V ++ +++ L + GI +K GV+ + C N L+ G
Sbjct: 649 FRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDG 708
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC++G++ A V + + PN TY++L+ G C+ G++ AF L M + GI D
Sbjct: 709 LCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 768
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+++L +G G +E+ M L+E M +G + + +S+ ++ G + + E +L+
Sbjct: 769 AFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLH 827
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ + P+ ++ + +I GL + +V + ++ Q+
Sbjct: 828 VIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 867
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 134/335 (40%), Gaps = 38/335 (11%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y+++I+ L Q+ + D+++ + + L + F Y + G +S A
Sbjct: 451 SPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL--KPNAFVYAPLISGYCREGNVSLA 508
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E M N P + +N ++ L E + + G+ + + L+ G
Sbjct: 509 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 568
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNV---------------------------------- 233
+NG+LE+A ++ +PN
Sbjct: 569 YLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 628
Query: 234 -RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
R Y L+H L GN+E AF +L +E G D ++ LISGL K E+ +L+
Sbjct: 629 NRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILD 688
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
M KG PN Y ++ GL A+ + ++ + + P+ V+Y LI G C
Sbjct: 689 EMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG 748
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREI-VGCVTFG 386
+ + ++ +M+ G P ++ + GC + G
Sbjct: 749 DISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 783
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 97/229 (42%), Gaps = 27/229 (11%)
Query: 127 DGFFYNVIKIYGNMAGRISKA---IETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEI 182
D F Y+V+ + AG + +A IE +F S+ +FN LV K+ +
Sbjct: 768 DAFVYSVLTTGCSSAGDLEQAMFLIEEMF----LRGHASISSFNNLVDGFCKRGKMQETL 823
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ ++ + G+ +A + ++ GL E G L + E ++ E R +S+L
Sbjct: 824 KLLHVIMGR-GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMD 882
Query: 243 L------------------CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ C++GN+++A L + + ++ ++ ++ L ++GK+
Sbjct: 883 MINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKL 942
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
E + LL+ M +G P+ +L L E ++ M+C +
Sbjct: 943 SEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNMLCHK 991
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ G V++A ++ M G+ N L+ L + + K+ E M G G P+
Sbjct: 186 KSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVY 245
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
+Y ++ + F AK+++ M + V+Y LI GLC VE+ K M
Sbjct: 246 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 305
Query: 365 VQQGFVP 371
G VP
Sbjct: 306 EDYGLVP 312
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/234 (18%), Positives = 87/234 (37%), Gaps = 54/234 (23%)
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+Y G+ DA ++L G G+LE A ++++E + ++ +++ L+ G C
Sbjct: 756 LYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFC 814
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLR------------------------- 279
++G ++E LL + G+ + +T +ISGL
Sbjct: 815 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAAR 874
Query: 280 ----------------------------KQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
K+G +++ + L + + K +SY ++
Sbjct: 875 HFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVD 934
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
L K + EA L+ M + PS L+ L +++ + VL M+
Sbjct: 935 NLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNML 988
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 127/257 (49%), Gaps = 1/257 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+I A E + + + P++ +N ++N L + + +Y++ + + + +
Sbjct: 344 GKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITY 403
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+IL+ C +G L+ A D + V Y++L++G C+ G++ A L M +
Sbjct: 404 SILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTN 463
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G++ TF LISG K +V++ KL +M G PN ++ ++ GL + E
Sbjct: 464 KGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAE 523
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV- 380
A EL ++ ++ P+ V+Y LI G C ++ +L+ M Q+G VP +R ++
Sbjct: 524 ASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLIS 583
Query: 381 GCVTFGKDNRNRVYVTE 397
G + G+ ++ + ++ +
Sbjct: 584 GLCSTGRVSKAKDFIDD 600
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 132/285 (46%), Gaps = 2/285 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R + PN +Y +IN L + D E + + + L +G Y+++ +GR
Sbjct: 358 RFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNL--RPNGITYSILIDSFCRSGR 415
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ AI M +V +N ++N + ++ GVE A
Sbjct: 416 LDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTS 475
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G C++ ++ AF + ++ PNV T++ L+ GLC + EA L + +
Sbjct: 476 LISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK 535
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I VT+N+LI G + GK+++ +LLE M KG P++ +Y+ ++ GL R +AK
Sbjct: 536 IKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAK 595
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ + + + + + + Y L+HG C + + + +M+Q+G
Sbjct: 596 DFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRG 640
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 145/332 (43%), Gaps = 16/332 (4%)
Query: 56 LSPTEVLKIFSN-LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
L P V ++ N L D + N K+ N + Y ++++ L ++ F ++
Sbjct: 67 LRPHHVEQVLMNTLDDAKLALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLL 126
Query: 115 QRIKVE---------------KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNC 159
+ + K C+FS +N++ ++ RI A+ + M + N
Sbjct: 127 HTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNL 186
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFY 219
P V+T + +LN L+ + + + ++ + GV D + +++ +CE + A
Sbjct: 187 LPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKE 246
Query: 220 VLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ + ++ TY+ L+HGLC+ V EA + + +G+ AD VT+ L+ G
Sbjct: 247 KIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFC 306
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFV 339
+ + E G++L++ M G P A+ ++ GL + + +A ELV ++ P+
Sbjct: 307 RLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLF 366
Query: 340 SYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LI+ LC ++ + + M P
Sbjct: 367 VYNALINSLCKGGDLDKAELLYSNMSLMNLRP 398
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+ G ++ A + N PN TY + L ++GN++EA GL M +G
Sbjct: 721 LMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM-LKG 779
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ A+TVT NI+I G K G+ E K+L M G +P+ +Y ++Y +
Sbjct: 780 LLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASV 839
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+L M+ + P V+Y LI+G C ++ + M+++G +P
Sbjct: 840 KLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 14/309 (4%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQ--AKRFDA-IEDIMQRIKVEKLCRF-----SD 127
S++N K D + E+L+ + NK + A F + I + ++V+K + +
Sbjct: 440 SLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDN 499
Query: 128 GFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
G NV ++G ++++A E ++ P+ T+N+++ +
Sbjct: 500 GITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKA 559
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ + G+ D L+ GLC G + A +D+ KQN + N YS L+HG
Sbjct: 560 FELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHG 619
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
C++G + EA M GI+ D V +LI G KQ + LL+ M +G P+
Sbjct: 620 YCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPD 679
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+ Y ++ + F +A E M+ E P+ V+Y L++GLC ++ + K
Sbjct: 680 NVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFK 739
Query: 363 KMVQQGFVP 371
+M Q VP
Sbjct: 740 RM-QAANVP 747
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 139/339 (41%), Gaps = 47/339 (13%)
Query: 89 PNEALYTLIINKLAQA----KRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
P E Y ++I + K F+ +ED+ Q+ V D + Y + GR+
Sbjct: 538 PTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLV------PDTYTYRPLISGLCSTGRV 591
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
SKA + + D+ N + ++ +L+ E + G+ +D C +L
Sbjct: 592 SKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVL 651
Query: 205 LKG-----------------------------------LCENGNLEAAFYVLDEFPKQNC 229
+ G + G+ + AF D + C
Sbjct: 652 IDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEEC 711
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
PNV TY+ LM+GLC+ G ++ A L +RM++ + +++T+ + L K+G ++E +
Sbjct: 712 FPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIG 771
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
L M KG N+ ++ ++ G RF EA +++ M + P V+Y LI+ C
Sbjct: 772 LHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYC 830
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
V + M+ +G P + + ++ GC G+
Sbjct: 831 RSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGE 869
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 129/304 (42%), Gaps = 18/304 (5%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKD--YNPNEALYTLII------NKLAQAKR-F 107
+ T + S + V Y+K D PN +T +I NK+A+A F
Sbjct: 469 TATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELF 528
Query: 108 DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
D E + ++IK ++ YNV+ G+I KA E L DM P T+
Sbjct: 529 D--ELVERKIKPTEVT-------YNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYR 579
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+++ L S + + K V+++ C + LL G C+ G L A E ++
Sbjct: 580 PLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQR 639
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
++ ++ L+ G ++ + + F LL+ M +G+ D V + +I K+G ++
Sbjct: 640 GINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKA 699
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+ + M + C+PN +Y ++ GL A L RM + P+ ++Y +
Sbjct: 700 FECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDN 759
Query: 348 LCNQ 351
L +
Sbjct: 760 LTKE 763
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 13/225 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-----AGR 143
P+ +YT +I+ ++ F + + E+ F NV+ M AG
Sbjct: 678 PDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEEC-------FPNVVTYTALMNGLCKAGE 730
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +A M + N P+ T+ L+ L E G++ + K G+ + NI
Sbjct: 731 MDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNI 789
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++G C+ G A VL E + P+ TYSTL++ C GNV + L + M + G
Sbjct: 790 IIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRG 849
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
++ D V +N+LI G G++++ +L + M +G P++ Q+
Sbjct: 850 LEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNKYLQK 894
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 114/252 (45%), Gaps = 4/252 (1%)
Query: 131 YNVIKIYGNMAG-RISKAIETLFDMPSYNCWPSVKTF-NLVLNLLVSAKLYGEIQGIYTS 188
YNV+ I+G G R+S+A+E + V T+ LVL + IQ +
Sbjct: 263 YNVL-IHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQ-LMDE 320
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+LG ++ L+ GL + G ++ A+ ++ + + PN+ Y+ L++ LC+ G+
Sbjct: 321 MVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGD 380
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+++A L M + + +T++ILI + G+++ + +RM G +Y
Sbjct: 381 LDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNS 440
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G A+ L M + + P+ ++ LI G C V+ + KM+ G
Sbjct: 441 LINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNG 500
Query: 369 FVPRMGMWREIV 380
P + + ++
Sbjct: 501 ITPNVYTFTALI 512
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 142/307 (46%), Gaps = 35/307 (11%)
Query: 98 INKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF-DMPS 156
+ +LA A D ++ +Q +++ + ++G + + AG +A++T + +
Sbjct: 68 VRRLAAAGDVDGVQLELQEMRLRGV-PCTEGALVAAVGAFAR-AGAPDRALKTFYRAVHD 125
Query: 157 YNCW-PSV-KTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNL 214
C P+ + +N +++ L+ + G + + + K GV+ + N+L++ LC+N +
Sbjct: 126 LGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRV 185
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA---------------------- 252
AA +LDE + C P+ TY T++ LC G V+EA
Sbjct: 186 GAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNAVILALC 245
Query: 253 --------FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
F ++ M G+ + +T+ +++ K G++ +L RM GC PN A
Sbjct: 246 REFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVA 305
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ ++ GL + R +A ++ M+ E +PS VSY LI GLC+ ++ VL M
Sbjct: 306 TFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDM 365
Query: 365 VQQGFVP 371
Q G P
Sbjct: 366 EQHGCFP 372
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 137/290 (47%), Gaps = 8/290 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ PN YT I+N +A I+ R+ + F V ++ + GR+
Sbjct: 263 RGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFND--GRV 320
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDACCL 201
A++ M + PS ++N+++ L S G+++G + + G +A
Sbjct: 321 HDALDMWKCMVAEGWAPSTVSYNVLIRGLCSV---GDLKGASSVLNDMEQHGCFPNARTY 377
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L+ G + G+L+ A + ++ + C+PNV Y+ ++ C+K +A L+++M
Sbjct: 378 STLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLV 437
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
E +TVTFN LI L +V + + M+ GC PN +Y E+L+GL + +
Sbjct: 438 ENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGD 497
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A ++V M + S V+Y ++ GLC ++ + + + +M+ +G P
Sbjct: 498 ALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQP 547
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 153/374 (40%), Gaps = 48/374 (12%)
Query: 48 YKLNHKDWLSPTEVLKIFSNLRDP------ISVISVLNQYSKRKDYNPNEALYTLIINKL 101
Y+ H + +++++L D + ++++ ++ PN Y L++ L
Sbjct: 120 YRAVHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRAL 179
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWP 161
Q R A ++ + K C D + ++ + GR+ +A E L P P
Sbjct: 180 CQNHRVGAARKMLDEMAT-KGCPPDDVTYGTIVSALCTL-GRVDEATEVLSAAP-----P 232
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
++N V+ L E+ + G++ + ++ C+ G L A +L
Sbjct: 233 VAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAIL 292
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
C PNV T++ L+ GL G V +A + + M +EG TV++N+LI GL
Sbjct: 293 ARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSV 352
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGL-----LD--------------------- 315
G ++ +L M+ GC+PN+ +Y ++ G LD
Sbjct: 353 GDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVY 412
Query: 316 ---------KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
K F +A+ L+ +M+ E P+ V++ LI LCN + V V +M +
Sbjct: 413 TNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRR 472
Query: 367 QGFVPRMGMWREIV 380
G P + E++
Sbjct: 473 HGCPPNGRTYNELL 486
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 130/296 (43%), Gaps = 2/296 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ + P+ Y ++I L ++ +E+ F + Y+ + + AG +
Sbjct: 333 EGWAPSTVSYNVLIRGLCSVGDLKGASSVLN--DMEQHGCFPNARTYSTLIDGFSKAGDL 390
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
AI DM C P+V + ++ + ++ + + + + N L
Sbjct: 391 DGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTL 450
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++ LC + A V E + C PN RTY+ L+HGL +GN +A ++ M++ GI
Sbjct: 451 IRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGI 510
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ VT+N ++SGL + E M + RM +G P++ ++ +++ + A
Sbjct: 511 ELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAW 570
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++G M + + Y L+ LCNQ +ED L KM+ +G P W +V
Sbjct: 571 ILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLV 626
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 15/279 (5%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
SVLN + + PN Y+ +I+ ++A D I + G NV+
Sbjct: 360 SVLNDMEQHGCF-PNARTYSTLIDGFSKAGDLDGAISIWNDMT-------RSGCKPNVV- 410
Query: 136 IYGNMAGRISKAI-----ETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+Y NM G K + E+L D M NC P+ TFN ++ L + + G G++
Sbjct: 411 VYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEM 470
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ G + N LL GL GN A ++ E E ++ TY+T++ GLC+
Sbjct: 471 RRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMG 530
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EA + RM GI D TF +I K+G+V +L M C N Y +
Sbjct: 531 REAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTIL 590
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ L ++ + +A + +M+ E + P+ V++ L+ G+
Sbjct: 591 MAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGV 629
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 127/289 (43%), Gaps = 7/289 (2%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLF 152
LY +I+ L + A+ + ++ + + + F YN++ R+ A + L
Sbjct: 136 LYNHLIDALLRENMVGAVALVCGNMRKDGV--QPNVFTYNLLVRALCQNHRVGAARKMLD 193
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M + C P T+ +++ L + E + ++A + +A ++ LC
Sbjct: 194 EMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNA-----VILALCREF 248
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
++ F V+ + + +PNV TY+T+++ C+ G + A +L RM G + TF
Sbjct: 249 RMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFT 308
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
L+ GL G+V + + + + M +G P++ SY ++ GL A ++ M
Sbjct: 309 ALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQH 368
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
P+ +Y LI G ++ + M + G P + ++ +VG
Sbjct: 369 GCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVG 417
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 120/250 (48%), Gaps = 1/250 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + +A++ LF M + C P+ T+N+++N L + + + + +LG+E+
Sbjct: 216 GMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTY 275
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L++G CE G +E A + +E + P V TY+T+M+GLC+ G V +A LL+ M +
Sbjct: 276 DPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVN 335
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + D V++N LI G + G + E L ++ + P+ +Y ++ GL
Sbjct: 336 KNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDV 395
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP-RMGMWREIV 380
A L MI P ++ + G C + + +M+ +G P R IV
Sbjct: 396 AMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIV 455
Query: 381 GCVTFGKDNR 390
G + G ++
Sbjct: 456 GELKLGDPSK 465
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 6/214 (2%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P+V T+N +L+ + E + +G + N+L+ GL +G +E A +
Sbjct: 200 PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKEL 259
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ + + E +V TY L+ G CEKG +EEA L E M S G VT+N ++ GL K
Sbjct: 260 IQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCK 319
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G+V + KLL+ M K P+ SY ++YG EA L + ++PS V+
Sbjct: 320 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVT 379
Query: 341 YKKLIHGLCNQKLVEDVDWVLK---KMVQQGFVP 371
Y LI GLC + D+D ++ +M++ G P
Sbjct: 380 YNTLIDGLCR---LGDLDVAMRLKDEMIKHGPDP 410
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 137/328 (41%), Gaps = 70/328 (21%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRI-----------------------KVEKLCR 124
+PN+ Y +++N L+ + + ++++Q + ++E+ R
Sbjct: 234 SPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASR 293
Query: 125 FSDGFF----------YNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ YN I +YG GR+S A + L M + N P + ++N ++
Sbjct: 294 LGEEMLSRGAVPTVVTYNTI-MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGY 352
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
GE ++ + N L+ GLC G+L+ A + DE K +P+V
Sbjct: 353 TRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDV 412
Query: 234 RTYSTLMHGLCEKGNV-----------------------------------EEAFGLLER 258
T++T + G C+ GN+ +AFG+ E
Sbjct: 413 FTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEE 472
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M + G D +T+N+ I GL K G ++E +L+++M G P+ +Y +++ L
Sbjct: 473 MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 532
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIH 346
+A+ L M+ + + PS V+Y LIH
Sbjct: 533 LRKARALFLEMLSKGIFPSVVTYTVLIH 560
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 157/334 (47%), Gaps = 26/334 (7%)
Query: 50 LNHKDWLSPTEVLKIFSNLRD-PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD 108
L H P ++++ + +R+ P+ + ++ + +E Y++I++ LA+
Sbjct: 39 LFHAAVAEPKLLVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMR 98
Query: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVK-TFN 167
+ +M+++ K+ +G VI + + S PSVK +
Sbjct: 99 SAYCVMEKVVSVKM---ENG----VIDVVSS----------------SEVSMPSVKLILD 135
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE-NGNLEAAFYVLDEFPK 226
L+L + V L + ++ G+ D N +L+ L + + N++ A V + +
Sbjct: 136 LLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVE 195
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
P V TY+T++ C+KG V+EA LL +M++ G + VT+N+L++GL G++E+
Sbjct: 196 CGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQ 255
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
+L++ M G + +Y ++ G +K + EA L M+ P+ V+Y +++
Sbjct: 256 AKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMY 315
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
GLC V D +L MV + +P + + ++
Sbjct: 316 GLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLI 349
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D N+ + GL + GNL+ A ++ + P+ TY++++H G++ +A
Sbjct: 477 GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKA 536
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L M S+GI VT+ +LI +G+++ + M KG +PN +Y ++ G
Sbjct: 537 RALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALING 596
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L ++ +A M + +SP+ +Y LI+ CN ++ + K M+ + P
Sbjct: 597 LCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQP 655
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 110/254 (43%), Gaps = 13/254 (5%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV---------- 119
D + + + + K + + L+ ++N+ Q RF I I+ +K+
Sbjct: 411 DVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQ 470
Query: 120 -EKLCRF--SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
E L R D YNV + G + +A E + M P T+ +++ + A
Sbjct: 471 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 530
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+ + ++ G+ +L+ G L+ A E ++ PNV TY
Sbjct: 531 GHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 590
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+ L++GLC+ +++A+ M+++GI + T+ ILI+ G +E ++L + M
Sbjct: 591 NALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 650
Query: 297 KGCYPNSASYQEVL 310
+ P+S +++ +L
Sbjct: 651 REIQPDSCTHRSLL 664
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 2/223 (0%)
Query: 127 DGFFYNVIKIYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D F Y + +I G + G SKA +M + P + T+N+ ++ L E +
Sbjct: 446 DRFAY-ITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASEL 504
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
G+ D ++ G+L A + E + P+V TY+ L+H
Sbjct: 505 VKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAV 564
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+G ++ A M +G+ + +T+N LI+GL K K+++ M+ KG PN +
Sbjct: 565 RGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYT 624
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
Y ++ + + EA L M+ + P +++ L+ L
Sbjct: 625 YTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHL 667
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 4/202 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+ + P+ Y + I+ L + ++++++ L D Y I MAG +
Sbjct: 476 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLV--PDHVTYTSIIHAHLMAGHL 533
Query: 145 SKAIETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
KA +M S +PSV T+ L+ + V +L I + K GV + N
Sbjct: 534 RKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK-GVHPNVITYNA 592
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+ ++ A+ E + PN TY+ L++ C G+ +EA L + M
Sbjct: 593 LINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDRE 652
Query: 264 IDADTVTFNILISGLRKQGKVE 285
I D+ T L+ L K K+
Sbjct: 653 IQPDSCTHRSLLKHLNKDYKLH 674
>gi|297832386|ref|XP_002884075.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329915|gb|EFH60334.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 462
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 1/216 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK-LYGEIQGIYTSAAKLGVEIDAC 199
GR+ +A + + ++ + P T+N +L L K L+ + + V+ D
Sbjct: 171 TGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLV 230
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
IL+ +C + NL A Y++ + +P+ Y+T+M G C EA G+ ++M
Sbjct: 231 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAIGVYKKM 290
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ EG++ D +T+N LI GL K G+VEE L+ M G P++A+Y ++ G+ K
Sbjct: 291 KEEGVEPDQITYNTLIYGLSKSGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES 350
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
A L+ M +P+ +Y L+HGLC +L++
Sbjct: 351 LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMD 386
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 3/261 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P++ + + L + R D +D+M+ + EK D + YN + + +
Sbjct: 156 PDQVTTDIAVRSLCETGRVDEAKDLMKEL-TEKHSP-PDTYTYNFLLKHLCKCKDLHVVY 213
Query: 149 ETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E + +M ++ P + +F ++++ + ++K E + + G + D N ++KG
Sbjct: 214 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 273
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C A V + ++ EP+ TY+TL++GL + G VEEA L+ M G + D
Sbjct: 274 FCTLSKGSEAIGVYKKMKEEGVEPDQITYNTLIYGLSKSGRVEEARMYLKTMVDAGYEPD 333
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T T+ L++G+ ++G+ + LLE M+ +GC PN +Y +L+GL + + EL
Sbjct: 334 TATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYE 393
Query: 328 RMICERMSPSFVSYKKLIHGL 348
M + Y L+ L
Sbjct: 394 LMKSSGVKLETNGYATLVRSL 414
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 10/210 (4%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P +N ++ + E G+Y + GVE D N L+ GL ++G +E A
Sbjct: 262 PDCFLYNTIMKGFCTLSKGSEAIGVYKKMKEEGVEPDQITYNTLIYGLSKSGRVEEARMY 321
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L EP+ TY++LM+G+C KG A LLE ME+ G + T+N L+ GL K
Sbjct: 322 LKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 381
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+++GM+L E MK G + Y ++ L+ + EA E+ V
Sbjct: 382 ARLMDKGMELYELMKSSGVKLETNGYATLVRSLVKSGKVAEAYEVFDYA---------VD 432
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
K L L + W LKK +QG V
Sbjct: 433 SKSLTDASAYSTLETTLKW-LKKAKEQGLV 461
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G+E D +I ++ LCE G ++ A ++ E +++ P+ TY+ L+ LC+ ++
Sbjct: 153 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 212
Query: 253 FGLLERMESE-GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
+ ++ M + + D V+F ILI + + E M L+ ++ G P+ Y ++
Sbjct: 213 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 272
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G + EA + +M E + P ++Y LI+GL VE+ LK MV G+ P
Sbjct: 273 GFCTLSKGSEAIGVYKKMKEEGVEPDQITYNTLIYGLSKSGRVEEARMYLKTMVDAGYEP 332
Query: 372 RMGMWREIV 380
+ ++
Sbjct: 333 DTATYTSLM 341
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 2/232 (0%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
+LK +D V +++ D P+ +T++I+ + +K E + K+
Sbjct: 199 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR--EAMYLVSKLG 256
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
D F YN I + S+AI M P T+N ++ L +
Sbjct: 257 NAGFKPDCFLYNTIMKGFCTLSKGSEAIGVYKKMKEEGVEPDQITYNTLIYGLSKSGRVE 316
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E + + G E D L+ G+C G A +L+E + C PN TY+TL+
Sbjct: 317 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLL 376
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
HGLC+ +++ L E M+S G+ +T + L+ L K GKV E ++ +
Sbjct: 377 HGLCKARLMDKGMELYELMKSSGVKLETNGYATLVRSLVKSGKVAEAYEVFD 428
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Query: 226 KQNCEPNVRTYSTLMHGLCE--KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283
+ N P T+ L+ C ++ +L M + G++ D VT +I + L + G+
Sbjct: 114 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGR 173
Query: 284 VEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE-RMSPSFVSYK 342
V+E L++ + K P++ +Y +L L K E V M + + P VS+
Sbjct: 174 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 233
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
LI +CN K + + +++ K+ GF P ++ I+ G T K
Sbjct: 234 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 279
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 154/328 (46%), Gaps = 34/328 (10%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD-AIEDIMQRIKVEKLCRFSDG 128
D + +S N P+ Y ++++ LA ++ F A++ + + +++ K S+
Sbjct: 113 DSFTALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELVKDDLPSED 172
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNC-WPSVKTFNLVLNLLVSAKL-YGEI-QGI 185
F N+I + + +C W V V ++LV A L G + +G+
Sbjct: 173 VFKNLI-------------------LCTEDCNWDPV-----VFDMLVKAYLRMGRVREGL 208
Query: 186 --YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ ++G N LL GL + + + V +E + PN+ T++ L H L
Sbjct: 209 RSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVL 268
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C+ G+ + LE+ME EG D D VT+N LI+ ++G++++ L + M +G P+
Sbjct: 269 CKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDL 328
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
SY ++ GL + R EA +L RM+ +SP V+Y LIHG C + +++ +L
Sbjct: 329 VSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHD 388
Query: 364 MVQQGFVP-RMGMWREIVGCVTFGKDNR 390
M+ G P W + G +GK+ +
Sbjct: 389 MIWNGISPDSFTCWVLVEG---YGKEGK 413
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M + P++ TFN++ ++L G++ + G + D N L+ C G
Sbjct: 248 EMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKG 307
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
L+ AFY+ ++ P++ +Y+ LM+GLC++G V EA L RM G+ D VT+N
Sbjct: 308 RLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYN 367
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS--------------------------- 305
LI G K+GK++E LL M G P+S +
Sbjct: 368 TLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRF 427
Query: 306 --------YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
Y ++ L + R AK L+ RM + P Y +LI C + +
Sbjct: 428 GVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEA 487
Query: 358 DWVLKKMVQQGFVPRMGMWREIVGCVT 384
+ +MV + P + +R ++GC++
Sbjct: 488 LLLKMEMVDKEIKPNLATYRAVIGCLS 514
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 1/204 (0%)
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D ++L+K G + + P V T + L++GL + + + +
Sbjct: 187 DPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVY 246
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E ME GI + TFNIL L K G + K LE+M+ +G P+ +Y ++ K
Sbjct: 247 EEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRK 306
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
R +A L M + P VSY L++GLC + V + + +MV +G P + +
Sbjct: 307 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 366
Query: 377 REIV-GCVTFGKDNRNRVYVTETV 399
++ G GK +R + + +
Sbjct: 367 NTLIHGYCKEGKMQESRSLLHDMI 390
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 8/282 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDA---IEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
+ + ++P+ Y +IN + R D + IM R V D Y +
Sbjct: 285 EEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGV-----VPDLVSYTALMNGLC 339
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
GR+ +A + M P + T+N +++ E + + G+ D+
Sbjct: 340 KEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSF 399
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+L++G + G +A ++ E + + YS L+ LC + A LLERM
Sbjct: 400 TCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERM 459
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+G + +N LI + + E + L M K PN A+Y+ V+ L R
Sbjct: 460 SKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRS 519
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
E + LVG M+ M P + L +G C + ++ + +L
Sbjct: 520 MEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLL 561
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 96/238 (40%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR+ A M P + ++ ++N L E ++ G+ D
Sbjct: 307 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 366
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C+ G ++ + +L + P+ T L+ G ++G A L+ ++
Sbjct: 367 NTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQR 426
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ ++ LI L ++ + LLERM G P Y E++ E
Sbjct: 427 FGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAE 486
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
A L M+ + + P+ +Y+ +I L + + ++ +MV G +P + + R +
Sbjct: 487 ALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRAL 544
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 101/252 (40%), Gaps = 18/252 (7%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA-G 142
R+ P+ YT ++N L + R + R+ L D YN + I+G G
Sbjct: 321 RRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLS--PDIVTYNTL-IHGYCKEG 377
Query: 143 RISKAIETLFDM-------PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVE 195
++ ++ L DM S+ CW V+ + L + L E+Q + GV
Sbjct: 378 KMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQ-------RFGVS 430
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
I + L+ LC AA +L+ K +P + Y+ L+ C+ + EA L
Sbjct: 431 ISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLL 490
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
M + I + T+ +I L + + EG L+ M G P+ + + YG
Sbjct: 491 KMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCR 550
Query: 316 KKRFPEAKELVG 327
+ +A+ L+
Sbjct: 551 ENDIDKAESLLS 562
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 135/286 (47%), Gaps = 8/286 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P +YT++I L + + E + + ++ ++ + + + YN + +A+
Sbjct: 215 PTVIVYTILIRGLCSDNKIEEAESMHRAMR--EVGVYPNVYTYNTLMDGYCKLANAKQAL 272
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG---IYTSAAKLGVEIDACCLNILL 205
DM P V TF ++++ L +GE++ ++ + K V + N L+
Sbjct: 273 RLYQDMLGEGLVPDVVTFGILIDGLCK---FGEMKAARNLFVNMIKFSVTPNIAVYNSLI 329
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
C+ G++ A + E + P+V TYS L+ GLC EEA + E+M EGI
Sbjct: 330 DAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGIL 389
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
A++VT+N LI G K+GK+++ +++ +M G PN ++ ++ G + A +
Sbjct: 390 ANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGI 449
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + +SP V+Y +I G C +++ + M+ G P
Sbjct: 450 YSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITP 495
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 34/288 (11%)
Query: 117 IKVEKLCRFSD-----GFFYNVIK--------IYGNM------AGRISKAIETLFDMPSY 157
I ++ LC+F + F N+IK +Y ++ G +S+A+ ++ +
Sbjct: 292 ILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERF 351
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA 217
P V T+++++ L S E I+ K G+ ++ N L+ G C+ G ++ A
Sbjct: 352 EVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKA 411
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
+ + + EPNV T+STL+ G C+ N++ A G+ M + + D VT+ +I G
Sbjct: 412 LEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDG 471
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP- 336
K G ++E +KL M G PN + +L GL + +A EL I E +P
Sbjct: 472 HCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKI-EFQTPR 530
Query: 337 -------------SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ V+Y LIHGLC + M + G P
Sbjct: 531 CNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQP 578
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 158/386 (40%), Gaps = 54/386 (13%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF---DAIED 112
L+P ++ N R P + N ++ + ++ L+ +KL R+ D +++
Sbjct: 28 LTPDSLITTVLNCRSPWKALEFFNAAPEKNIQLYSAIIHVLVGSKLLSHARYLLNDLVQN 87
Query: 113 IMQRIKVEKLCRF---------SDGFFYNVIKIYGNMAGRISKA--IETLFDM-PSYNCW 160
+++ K C+ S F NV YG + + K +E M
Sbjct: 88 LVKSHKPYHACQLAFSELSRLKSSKFTPNV---YGELIIVLCKMELVEEALSMYHKVGAA 144
Query: 161 PSVKTFNLVLNLLVSA-------KLYGEI--QGIYTSAAKLGVEIDACC----------- 200
+++ N++L +LV ++Y E+ G+ S G ID CC
Sbjct: 145 LTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEM 204
Query: 201 ---------------LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
IL++GLC + +E A + + PNV TY+TLM G C+
Sbjct: 205 FDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCK 264
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
N ++A L + M EG+ D VTF ILI GL K G+++ L M PN A
Sbjct: 265 LANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAV 324
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ EA L + +SP +Y LI GLC+ E+ + +KM
Sbjct: 325 YNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMT 384
Query: 366 QQGFVPRMGMWREIV-GCVTFGKDNR 390
++G + + ++ GC GK ++
Sbjct: 385 KEGILANSVTYNSLIDGCCKEGKMDK 410
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 52/272 (19%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+R + +P+ Y+++I L R + +I +++ E + ++ YN + G
Sbjct: 349 ERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGI--LANSVTYNSLIDGCCKEG 406
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGE-------------- 181
++ KA+E M P+V TF+ ++ NL + +Y E
Sbjct: 407 KMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYT 466
Query: 182 --IQG------------IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE---- 223
I G +Y+ G+ + ++ LL GLC++G + A + E
Sbjct: 467 AMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEF 526
Query: 224 -FPKQNCEP--------NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
P+ N + N Y+ L+HGLC+ G +A L M G+ D V + ++
Sbjct: 527 QTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVM 586
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+ GL + + M L M G PNSA +
Sbjct: 587 LRGLFQVKYIL--MMLHADMLKFGVIPNSAVH 616
>gi|357128605|ref|XP_003565962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Brachypodium distachyon]
Length = 431
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 142/297 (47%), Gaps = 5/297 (1%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
+ + ++ +LA+A+ F + ++ ++ + F +I G A R A+
Sbjct: 54 DHPFASCVLYRLARARLFPILLPLISELRSRR-APLRGTVFAALIDRLG-AAARPDAALL 111
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+P++ C S TF+ +L+ V + + AAKLGV +A NI+LKG C
Sbjct: 112 VFRAVPAF-CSHSNATFHALLHCFVCNGRLDAARDLLPRAAKLGVRPNAVSYNIILKGAC 170
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
E A VLDE + P V T++TL+ C++G + A L E M G+ + V
Sbjct: 171 ERDGFVGARVVLDEMLGRGVRPTVVTFNTLVGAACQEGELGGAERLREEMVRRGVTPNAV 230
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+++L+ GL G+ ++ K++ M+ +GC + +Y ++ + + L+ M
Sbjct: 231 TYSLLMRGLCDAGRHDDAKKMMFDMEYQGCQTEAVNYGVLMSAYARQGNIDGVRGLLSNM 290
Query: 330 ICERMSPSFVSYKKLIHGLC-NQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVT 384
++ P SY LI LC N ++VE +++ V++G VP +R + GC +
Sbjct: 291 RKRKLKPDDASYNVLIKCLCDNGRVVEAHKALVEMQVKEGTVPSAATYRVLADGCCS 347
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 3/284 (1%)
Query: 106 RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKT 165
R DA D++ R KL + YN+I A L +M P+V T
Sbjct: 139 RLDAARDLLPR--AAKLGVRPNAVSYNIILKGACERDGFVGARVVLDEMLGRGVRPTVVT 196
Query: 166 FNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP 225
FN ++ G + + + GV +A ++L++GLC+ G + A ++ +
Sbjct: 197 FNTLVGAACQEGELGGAERLREEMVRRGVTPNAVTYSLLMRGLCDAGRHDDAKKMMFDME 256
Query: 226 KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE 285
Q C+ Y LM +GN++ GLL M + D ++N+LI L G+V
Sbjct: 257 YQGCQTEAVNYGVLMSAYARQGNIDGVRGLLSNMRKRKLKPDDASYNVLIKCLCDNGRVV 316
Query: 286 EGMKLLERMKGK-GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
E K L M+ K G P++A+Y+ + G + F ++ M+ P +++ L
Sbjct: 317 EAHKALVEMQVKEGTVPSAATYRVLADGCCSAQDFGLGLRVLNAMLASGHCPLAHTFRHL 376
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKD 388
+ GL + E+ +VL+KM + G W+ +V CV G +
Sbjct: 377 VKGLSEDEKTEEACFVLEKMAESGAWMDAEGWQSLVTCVCSGSE 420
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 138/306 (45%), Gaps = 17/306 (5%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDA----IEDIMQ--RIKVEKLCRFSDGFFYNVIKIY 137
K ++P+ I+ L ++ D I D+M+ R+K+ L YN +
Sbjct: 177 HKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTL-------VYNALISG 229
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
AGRI KA M C P + T+N+ LN + + + + + G+E D
Sbjct: 230 FCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPD 289
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDE--FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
N LLKG+C+ + A+ ++ +PK C+ V +Y+T++ C+ G+ A+ L
Sbjct: 290 VYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCD--VVSYNTIIKAFCKIGDTTSAYKL 347
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
E M +GI D VTF I I +G KLL++M G P+ Y ++ L
Sbjct: 348 FEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCK 407
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
+ A + M+ + +SP +S+ LI+G C V + + ++M +G P
Sbjct: 408 SGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVT 467
Query: 376 WREIVG 381
++ I+G
Sbjct: 468 YKLIIG 473
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
L D+ SYN +K F + + + KL+ E+ + G+ D I +K
Sbjct: 322 LCDVVSYN--TIIKAFCKIGDTTSAYKLFEEM-------GQKGIPPDVVTFTIFIKAFLG 372
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G+ A +LD+ + P+ Y+T++ LC+ G VE A + M +GI D ++
Sbjct: 373 KGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVIS 432
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
FN LI+G K +V E M L E M+ +G YP+ +Y+ ++ GL+++K+ A + G+M+
Sbjct: 433 FNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMM 492
Query: 331 CERMSPSFVSYKKLIHG 347
+ + + LI G
Sbjct: 493 DKGFTLDRAIAQTLIRG 509
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 1/234 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG I KA++ +M NC +N + +L++ + Y+ G + +
Sbjct: 22 AGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFT 81
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+ + GLC+ N +L + NC P++ ++ +H L +G ++ A + E++
Sbjct: 82 YSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIV 141
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G D VT+ I+I G+ K K + ++ M KG P++ + ++ GL D ++
Sbjct: 142 KNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVD 201
Query: 321 EAKEL-VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
A EL + M R+ S + Y LI G C ++ + M + G P +
Sbjct: 202 LAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDL 255
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 130/349 (37%), Gaps = 73/349 (20%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ I L + K F I++++ +E L D + +N+ + GRI A+E
Sbjct: 82 YSRFITGLCKVKNFTFIDELLH--DMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEK 139
Query: 154 MPSYNCWPSVKTFNLVL---------------------------NLLVSAKLYGEIQG-- 184
+ P V T+ +++ N A + G G
Sbjct: 140 IVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRK 199
Query: 185 ------IYTSAAKLG-VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
+ K G V++ N L+ G C G ++ A + + CEP++ TY+
Sbjct: 200 VDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYN 259
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGID-------------------------------- 265
++ C++ +++A LL+ ME GI+
Sbjct: 260 VFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWP 319
Query: 266 ---ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
D V++N +I K G KL E M KG P+ ++ + L K F A
Sbjct: 320 KGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIA 379
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
K+L+ +M +SP + Y +I LC VE + MV+QG P
Sbjct: 380 KKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISP 428
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G + G ++ A V DE + NC Y+ + L + A +M + G
Sbjct: 16 IAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGF 75
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ T++ I+GL K +LL M+ C P+ ++ L+ L + R A E
Sbjct: 76 SLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALE 135
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +++ P V+Y +IHG+C K + + M+ +GF P
Sbjct: 136 VFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSP 182
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%)
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ + A + + I+G K G +++ +++ + M C S Y + L++ RF
Sbjct: 3 QSLGAHRLIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDL 62
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A +M S S +Y + I GLC K +D +L M +P
Sbjct: 63 ANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLP 112
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 116/241 (48%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A++ +M +PS+ F+ +L+ + K + + LGV + N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ LC L A +L + K P++ T ++L++G C + EA L+++M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G DTVTF L+ GL + K E + L+ERM KGC P+ +Y V+ GL + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ V Y +I LC + V+D + +M +G P + + ++ C
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 383 V 383
+
Sbjct: 285 L 285
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 142/292 (48%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ ++ +++ +A+ K+FD + + K+E L + + YN++ ++S A+
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGE--KMEILGVSHNLYTYNIMINCLCRRSQLSFAL 120
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M PS+ T N +LN E + ++G + D L+ GL
Sbjct: 121 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 180
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
++ A +++ + C+P++ TY +++GLC++G + A LL +ME I+AD
Sbjct: 181 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV 240
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V ++ +I L K V++ + L M KG P+ +Y ++ L + R+ +A L+
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 300
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ +++P+ V++ LI + + + + + +M+Q+ P + + ++
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 2/258 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ +PN Y +IN R D + I + V K C D YN + A +
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT-LMVSKDC-LPDVVTYNTLINGFCKAKK 395
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +E DM + T+ +++ A Q ++ GV + N
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC+NG LE A V + K EP++ TY+ + G+C+ G VE+ + L + +G
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D + +N +ISG K+G EE L +MK G P+S +Y ++ L +
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 575
Query: 324 ELVGRMICERMSPSFVSY 341
EL+ M R + +Y
Sbjct: 576 ELIKEMRSCRFAGDASTY 593
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ S+A+ + M C P + T+ V+N L + K +E D +
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++ LC+ +++ A + E + P+V TYS+L+ LC G +A LL M
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
I+ + VTFN LI K+GK+ E KL + M + PN +Y ++ G R EA
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+++ M+ + P V+Y LI+G C K V D + + M ++G V
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 128/287 (44%), Gaps = 3/287 (1%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
+P +++LN+ K K + +Y+ +I+ L + + D ++ + + + D F
Sbjct: 220 EPDLALNLLNKMEKGK-IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI--RPDVF 276
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
Y+ + GR S A L DM P+V TFN +++ E + ++
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ ++ + N L+ G C + L+ A + ++C P+V TY+TL++G C+ V
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
+ L M G+ +TVT+ LI G + + + ++M G +PN +Y +
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
L GL + +A + + +M P +Y + G+C VED
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 133/287 (46%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+ Y +IN L + D +++ +++ K+ +D Y+ + +
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI--EADVVIYSTVIDSLCKYRHV 256
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A+ +M + P V T++ +++ L + + + + + + + + N L
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ + G L A + DE +++ +PN+ TY++L++G C ++EA + M S+
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VT+N LI+G K KV +GM+L M +G N+ +Y +++G A+
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +M+ + + P+ ++Y L+ GLC +E V + + + P
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 115/240 (47%), Gaps = 2/240 (0%)
Query: 142 GRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G++ +A E LFD M + P++ T+N ++N E Q I+T D
Sbjct: 324 GKLIEA-EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C+ + + + ++ N TY+TL+HG + + + A + ++M
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+G+ + +T+N L+ GL K GK+E+ M + E ++ P+ +Y + G+ +
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ +L + + + P ++Y +I G C + L E+ + KM + G +P G + ++
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 128/294 (43%), Gaps = 2/294 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ +T +++ L Q + +++R+ V K C+ D Y + G
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVV-KGCQ-PDLVTYGAVINGLCKRGEPDL 223
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ L M V ++ V++ L + + ++T G+ D + L+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC G A +L + ++ PNV T+++L+ ++G + EA L + M ID
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ VT+N LI+G +++E ++ M K C P+ +Y ++ G K+ + EL
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + + V+Y LIHG ++ V K+MV G P + + ++
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Glycine max]
Length = 626
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 158/316 (50%), Gaps = 24/316 (7%)
Query: 56 LSPTEVLKIFSNLR-DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF----DAI 110
+ P E+ +I + D SV++ N + P Y +I++ LA ++ F + +
Sbjct: 84 MGPHEISRILLRCQSDHSSVLTFFNWVKNDLNITPTLHNYCVIVHILAWSRVFSHAMNLL 143
Query: 111 EDIMQRIKVEKLC-RFSDGFFYNVIK----------IYGNM------AGRISKAIETLFD 153
+++Q ++VE +C +DG + N+++ I+ + AG + K + T F
Sbjct: 144 SELIQLVEVEGVCVPPNDGIYENLVECTEDCNWNPAIFDMLIKAYVKAGMVEKGLAT-FR 202
Query: 154 MPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
C+ P+V N +L+ L G+ +Y +LG+ +A NI+ LC++G
Sbjct: 203 RNIEACFIPNVIACNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAYTFNIMTHVLCKDG 262
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+ + LD+ ++ EP++ TY+TL++ C+K +E+AF L + M G+ + +T
Sbjct: 263 DTDKVTRFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHT 322
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
+L++GL ++GKV+E +L +M +G P+ SY ++ G + + + L+ MI
Sbjct: 323 VLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGN 382
Query: 333 RMSPSFVSYKKLIHGL 348
+ P V+ + ++ G
Sbjct: 383 GICPDSVTCRLIVEGF 398
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 121/275 (44%), Gaps = 5/275 (1%)
Query: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL 168
A+ + M R+ + + + + +N++ G K L M P + T+N
Sbjct: 234 AVYEEMGRLGIHR-----NAYTFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNT 288
Query: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
++N + + +Y GV + +L+ GLCE G ++ A + + +
Sbjct: 289 LVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRG 348
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
+P+V +Y+TL+ G C +G ++ LL M GI D+VT +++ G + GK+ +
Sbjct: 349 IDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSAL 408
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ +K Y ++ L + R A+ + R+ + P +Y KL+ L
Sbjct: 409 NTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKINTYNKLVESL 468
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
C VE+ + +MV++ + + +R ++ C+
Sbjct: 469 CKFNNVEEALILKSEMVKRSMILNLVAYRAVISCL 503
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 90/220 (40%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P++ T +++N L E ++ G++ D N L+ G C G ++ +
Sbjct: 316 PNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSL 375
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L E P+ T ++ G G + A + ++ I ++ LI L
Sbjct: 376 LHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCI 435
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G+ L R+ G P +Y +++ L EA L M+ M + V+
Sbjct: 436 EGRPFAARSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVA 495
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y+ +I LC + + +L++MV G +P + + R ++
Sbjct: 496 YRAVISCLCRVNRTLEAEGLLEEMVSSGILPDVEISRALI 535
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L++ LC+ N+E A + E K++ N+ Y ++ LC EA GLLE M S
Sbjct: 462 NKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLEEMVS 521
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
GI D LI+G ++ KV++ + LL+ + ++ SY V+ D E
Sbjct: 522 SGILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVYDTESYNAVVKVFCDVGNVAE 581
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
EL +++ + ++ K +IHGL QK +E D +L
Sbjct: 582 LLELQDKLLKVGYVSNRLTCKYVIHGL--QKAMEQDDEML 619
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 101/255 (39%), Gaps = 16/255 (6%)
Query: 124 RFSDGFF-YNVIKIYGNMA---------------GRISKAIETLFDMPSYNCWPSVKTFN 167
R D F+ Y ++ I G M G++ +A + M P V ++N
Sbjct: 298 RLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYN 357
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+++ + + G+ D+ ++++G +G L +A + E +
Sbjct: 358 TLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRF 417
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
+ Y L+ LC +G A L R+ +G T+N L+ L K VEE
Sbjct: 418 RIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEA 477
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
+ L M + N +Y+ V+ L R EA+ L+ M+ + P + LI+G
Sbjct: 478 LILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLEEMVSSGILPDVEISRALING 537
Query: 348 LCNQKLVEDVDWVLK 362
C + V+ +LK
Sbjct: 538 YCEENKVDKAVSLLK 552
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 19/236 (8%)
Query: 98 INKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY 157
+N + + KRF RIK+ + D + Y ++ + + GR A L +
Sbjct: 408 LNTVVELKRF--------RIKIPE-----DLYDYLIVALC--IEGRPFAARSFLLRISQD 452
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE-NGNLEA 216
P + T+N ++ L E + + K + ++ ++ LC N LEA
Sbjct: 453 GYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEA 512
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
+L+E P+V L++G CE+ V++A LL+ +E DT ++N ++
Sbjct: 513 EG-LLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVYDTESYNAVVK 571
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
G V E ++L +++ G N + + V++GL +K + E++G + E
Sbjct: 572 VFCDVGNVAELLELQDKLLKVGYVSNRLTCKYVIHGL--QKAMEQDDEMLGHDMLE 625
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 149/352 (42%), Gaps = 71/352 (20%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKV-EKLCRFS-----DGFF------------ 130
P++ Y ++IN LA+ + ++ R+++ +K F+ G+F
Sbjct: 266 PSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQ 325
Query: 131 --------------YNVIKIYGNM-AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
YN I I+G +G + A +M + P + T+N ++N
Sbjct: 326 LEMENEGIVPTVVTYNTI-IHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCK 384
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
A E ++ + G+ NILL G C G+LE A E +Q C+P+V T
Sbjct: 385 AGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVST 444
Query: 236 YSTLMHG----------------LCEK-------------------GNVEEAFGLLERME 260
Y+ LM+G + K G+ EAF L E M
Sbjct: 445 YTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMI 504
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S GI +DTVT+NI + GL K G +++ L +M G P+ +Y +++ ++ R
Sbjct: 505 SRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLR 564
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQQGFVP 371
EA+++ M+ + PS V+Y IH C + L W +KM+++G P
Sbjct: 565 EARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGW-FQKMLEEGVRP 615
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 3/221 (1%)
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M + P +K NLVL L + +++ +Y +LG+E N LL G
Sbjct: 186 EMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREG 245
Query: 213 NLEAAFYVLDEFPKQ--NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
++ A +L E + C P+ TY+ +++GL KG +E+A L++RM A T
Sbjct: 246 RVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASAFT 304
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
FN LI+G +G VE+ L M+ +G P +Y +++G+ A+ M
Sbjct: 305 FNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMR 364
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P ++Y LI+G C +++ W+ + + G P
Sbjct: 365 AMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAP 405
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 135/303 (44%), Gaps = 30/303 (9%)
Query: 83 KRKDYNPNEALYTLIIN------KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
KR P+ Y ++++ L +A+RF ++ VE+ C+ D Y ++ +
Sbjct: 399 KRAGLAPSVLTYNILLDGYCRLGDLEEARRF-------KQEMVEQGCQ-PDVSTYTIL-M 449
Query: 137 YGNMAGRISKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL--- 192
G+ R + FD M S P +N +SA+L I G + A +L
Sbjct: 450 NGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNT----RISAEL---ILGSTSEAFQLTEV 502
Query: 193 ----GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+ D NI L GLC++GNL+ A+ + + +P+ TY+ L+H CE+G
Sbjct: 503 MISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGR 562
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ EA + + M G+ VT+ + I ++G + ++M +G PN +Y
Sbjct: 563 LREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNV 622
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+++ L R A + M+ +SP+ +Y LI G C + E+ + +M Q G
Sbjct: 623 LIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHG 682
Query: 369 FVP 371
P
Sbjct: 683 IHP 685
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 8/264 (3%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
P+ + YT+++N + + + + + + L D F YN + G S+A
Sbjct: 439 QPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQ--PDCFAYNTRISAELILGSTSEA 496
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL---GVEIDACCLNIL 204
+ M S T+N+ L+ L + G ++ Y K+ G++ D L
Sbjct: 497 FQLTEVMISRGISSDTVTYNIFLDGLCKS---GNLKDAYVLWMKMVSDGLQPDCITYTCL 553
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ CE G L A + D P+ TY+ +H C +GN+ A+G ++M EG+
Sbjct: 554 IHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGV 613
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ VT+N+LI L + G+ + M +G PN +Y ++ G + + EA
Sbjct: 614 RPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIR 673
Query: 325 LVGRMICERMSPSFVSYKKLIHGL 348
L M + P ++ L G
Sbjct: 674 LYSEMHQHGIHPDHCTHNALFKGF 697
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 7/234 (2%)
Query: 142 GRISKAIETLFDMPSY--NCWPSVKTFNLVLNLLVSAKLYGEIQ--GIYTSAAKLGVEID 197
GR+ +A + L +M + C PS T+N+V+N L GE++ ++ +
Sbjct: 245 GRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARK---GELEKAAQLVDRMRMSKKAS 301
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
A N L+ G G++E A + E + P V TY+T++HG+ GNVE A
Sbjct: 302 AFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFV 361
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M + G+ D +T+N LI+G K G ++E + L +K G P+ +Y +L G
Sbjct: 362 EMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLG 421
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA+ M+ + P +Y L++G + + V +M+ +G P
Sbjct: 422 DLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQP 475
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N++L+ L + + V E + EP++ TY+TL+ +G V++A LL ME+
Sbjct: 200 NLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEA 259
Query: 262 E--GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G VT+N++I+GL ++G++E+ +L++RM+ ++ ++ ++ G +
Sbjct: 260 RPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASAFTFNPLITGYFARGSV 318
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
+A L M E + P+ V+Y +IHG+ VE +M G +P + + +
Sbjct: 319 EKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSL 378
Query: 380 V 380
+
Sbjct: 379 I 379
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
E P ++ + ++ L ++ ++ + M GI+ VT+N L+ ++G
Sbjct: 186 EMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREG 245
Query: 283 KVEEGMKLLERMKGK--GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+V++ KLL M+ + GC P+ +Y V+ GL K +A +LV RM + + +F +
Sbjct: 246 RVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAF-T 304
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ LI G + VE + +M +G VP + + I+
Sbjct: 305 FNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTII 344
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 150/314 (47%), Gaps = 7/314 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC-RFSDGFFYNVIKIYG-NMAG 142
KD P+ Y ++ L + + F+ ++M E LC RFS + G G
Sbjct: 291 KDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD----EMLCLRFSPSEAAVSSLVEGLRKRG 346
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+I +A+ + + + P++ +N +++ L + + E + ++ K+G+ + +
Sbjct: 347 KIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYS 406
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C G L+ A L E + +V Y++L++G C+ G++ A G + M ++
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
++ VT+ L+ G +GK+ + ++L M GKG P+ ++ +L GL +A
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-G 381
+L M + P+ V+Y +I G C + + LK+M ++G VP +R ++ G
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG 586
Query: 382 CVTFGKDNRNRVYV 395
G+ + +V+V
Sbjct: 587 LCLTGQASEAKVFV 600
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+I+KA+ +M PS+ TF +L+ L A L + ++ A+ V+ +
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 202 NILLKGLCENGNLEAAFYVLDEFP-----------------------------------K 226
N++++G CE G++ AF L E K
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
NCE N Y+ L+HG C +G +EEA + + M G+D D V + +LI G K +
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
LL+ M +G P+ Y ++ F EA + MI E P+ V+Y +I+
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVP 371
GLC V + + + KM VP
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVP 750
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 144/317 (45%), Gaps = 6/317 (1%)
Query: 56 LSPTE--VLKIFSNLRDPISVISVLNQYSKRKDY--NPNEALYTLIINKLAQAKRFDAIE 111
SP+E V + LR + LN + D+ +PN +Y +I+ L + ++F E
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 112 DIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+ R+ L R +D + +I ++ G++ A+ L +M SV +N ++N
Sbjct: 388 LLFDRMGKIGL-RPNDVTYSILIDMFCR-RGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
+G +E L+ G C G + A + E + P
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
++ T++TL+ GL G + +A L M + + VT+N++I G ++G + + + L
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ M KG P++ SY+ +++GL + EAK V + + + Y L+HG C +
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 352 KLVEDVDWVLKKMVQQG 368
+E+ V ++MVQ+G
Sbjct: 626 GKLEEALSVCQEMVQRG 642
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V+T + +L+ LV + +G ++ +G+ D +++ LCE +L A +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
+ C+ N+ Y+ L+ GLC+K V EA G+ + + + + D VT+ L+ GL K
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+ E G+++++ M P+ A+ ++ GL + + EA LV R++ +SP+
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
Y LI LC + + + + +M + G P
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRP 400
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%)
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+E DM S P V + V+ L K + + G +++ N+L+
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC+ + A + + ++ +P+V TY TL++GLC+ E +++ M
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ L+ GLRK+GK+EE + L++R+ G PN Y ++ L ++F EA+ L
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
RM + P+ V+Y LI C + ++ L +MV G
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G++ D ++ + G+ + AF + D + C PN TY+ +++GLC+ G V EA
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 253 FGLLERMES-----------------------------------EGIDADTVTFNILISG 277
L +M+ +G+ A+T T+N+LI G
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
+QG++EE +L+ RM G G P+ +Y ++ L + +A EL M + + P
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
V+Y LIHG C + + +M++QG +P
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+S+A E + M + C ++ +N++++ L + E GI A ++ D
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+ E ++DE P+ S+L+ GL ++G +EEA L++R+ G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + +N LI L K K E L +RM G PN +Y ++ + + A
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+G M+ + S Y LI+G C + + + +M+ + P + + ++G
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 8/188 (4%)
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID----ACCLNILLKGLC 209
M + C P+ T+ V+N L A E + + + + + C L+IL KG
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG-- 765
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
+++ A + + K N TY+ L+ G C +G +EEA L+ RM +G+ D +
Sbjct: 766 -EVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
T+ +I+ L ++ V++ ++L M KG P+ +Y +++G +A EL M
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Query: 330 ICERMSPS 337
+ + + P+
Sbjct: 884 LRQGLIPN 891
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 103/220 (46%), Gaps = 8/220 (3%)
Query: 89 PNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
P++ +YT +I+ ++ F I D+M + + C ++ + VI AG ++
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLM----INEGCVPNEVTYTAVINGLCK-AGFVN 734
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A M + P+ T+ L++L ++ + +A G+ + N+L+
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLI 794
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
+G C G +E A ++ P+ TY+T+++ LC + +V++A L M +GI
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
D V +N LI G G++ + +L M +G PN+ +
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>gi|449458793|ref|XP_004147131.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g19280-like [Cucumis sativus]
gi|449503522|ref|XP_004162044.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g19280-like [Cucumis sativus]
Length = 532
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 121/261 (46%), Gaps = 8/261 (3%)
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
G +++++ G + K + L ++ ++ P V + V+N L L E +
Sbjct: 236 GMAWDLLEEMHRQEGNLGKGWKVLLELRNFGSKPDVVDYTTVINSLCKVSLLKEATALDV 295
Query: 188 SAAKL--------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
A++ G++ D NIL+ + G + AF +LD N P+V TY+TL
Sbjct: 296 EMAEVMFEKMIVEGLKPDVVVYNILMDAYGKKGYMHKAFKLLDMMRSTNVTPDVVTYNTL 355
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
++GL +G ++EA +L+ + G D VT+ +I G +G EE L M
Sbjct: 356 INGLVMRGFLQEAKDILDELIRRGFSVDVVTYTNIIHGYSTRGNFEEAFLLWYHMAENCV 415
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P+ + +L G +KR EA L +M+ + P + Y LIHG C+ V++
Sbjct: 416 TPDVVTCSALLSGYCREKRMDEANALFCKMLDIGLKPDLILYNTLIHGFCSVGNVDEGCN 475
Query: 360 VLKKMVQQGFVPRMGMWREIV 380
++KKM++ +P R +V
Sbjct: 476 LVKKMIESSIIPNNVTHRALV 496
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 7/239 (2%)
Query: 89 PNEALYTLIINKLAQA---KRFDAIEDIMQRIKVEKLCRFS---DGFFYNVIKIYGNMAG 142
P+ YT +IN L + K A++ M + EK+ D YN++ G
Sbjct: 269 PDVVDYTTVINSLCKVSLLKEATALDVEMAEVMFEKMIVEGLKPDVVVYNILMDAYGKKG 328
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ KA + L M S N P V T+N ++N LV E + I + G +D
Sbjct: 329 YMHKAFKLLDMMRSTNVTPDVVTYNTLINGLVMRGFLQEAKDILDELIRRGFSVDVVTYT 388
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
++ G GN E AF + + P+V T S L+ G C + ++EA L +M
Sbjct: 389 NIIHGYSTRGNFEEAFLLWYHMAENCVTPDVVTCSALLSGYCREKRMDEANALFCKMLDI 448
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ D + +N LI G G V+EG L+++M PN+ +++ ++ G KKR +
Sbjct: 449 GLKPDLILYNTLIHGFCSVGNVDEGCNLVKKMIESSIIPNNVTHRALVLG-FQKKRVTD 506
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 202 NILLKGLCENGN---------------------LEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ILLK CE N + +A ++D+ N P++ Y +++
Sbjct: 167 SILLKVFCETHNGRKTLETTCSMMVNCYIKERMVTSALILIDQMKHLNIFPSIWVYKSVI 226
Query: 241 HGLCEKGNVEEAFGLLERMESE-----------------GIDADTVTFNILISGLRKQGK 283
L + A+ LLE M + G D V + +I+ L K
Sbjct: 227 KALLQTNQSGMAWDLLEEMHRQEGNLGKGWKVLLELRNFGSKPDVVDYTTVINSLCKVSL 286
Query: 284 VEEGMKL--------LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
++E L E+M +G P+ Y ++ K +A +L+ M ++
Sbjct: 287 LKEATALDVEMAEVMFEKMIVEGLKPDVVVYNILMDAYGKKGYMHKAFKLLDMMRSTNVT 346
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
P V+Y LI+GL + +++ +L +++++GF + + I+
Sbjct: 347 PDVVTYNTLINGLVMRGFLQEAKDILDELIRRGFSVDVVTYTNII 391
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,952,911,565
Number of Sequences: 23463169
Number of extensions: 243618371
Number of successful extensions: 674640
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6492
Number of HSP's successfully gapped in prelim test: 3698
Number of HSP's that attempted gapping in prelim test: 578312
Number of HSP's gapped (non-prelim): 54333
length of query: 404
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 259
effective length of database: 8,957,035,862
effective search space: 2319872288258
effective search space used: 2319872288258
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)