BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015590
(404 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LUD6|PP230_ARATH Pentatricopeptide repeat-containing protein At3g14580,
mitochondrial OS=Arabidopsis thaliana GN=At3g14580 PE=2
SV=1
Length = 405
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/385 (58%), Positives = 285/385 (74%), Gaps = 3/385 (0%)
Query: 1 MILRSHFARNHRQSIIQSLSSAST-ITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPT 59
++L + N R+S QSLSS+ I + + S+ D +L HKDWL+P
Sbjct: 6 LVLSATSNSNPRRS--QSLSSSGVRILSSSSSDRYTSSSQRYSGDDRLARLRHKDWLAPN 63
Query: 60 EVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV 119
EVLKIF N++DP ++ YSKRKDY P E+LY L+INK QAK +D IE++M+ IK+
Sbjct: 64 EVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKL 123
Query: 120 EKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY 179
EK CRFS+ FFYN+++IYGN+AGRI++AIE LF MP + CWPS K+FN +LNLLVSAKL+
Sbjct: 124 EKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLF 183
Query: 180 GEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
EI I+ SA KLGVEIDACCLNIL+KGLCE+GNLEAA +LDEFP+Q PNV T+S L
Sbjct: 184 DEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPL 243
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ G C KG EEAF LLERME E I+ DT+TFNILISGLRK+G+VEEG+ LLERMK KGC
Sbjct: 244 IRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGC 303
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
PN +YQEVLYGLLDKKR EAKE++ +MI M PSF+SYKK++ GLC K V ++DW
Sbjct: 304 EPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDW 363
Query: 360 VLKKMVQQGFVPRMGMWREIVGCVT 384
VL++MV GFVP+ MW ++V CV
Sbjct: 364 VLRQMVNHGFVPKTLMWWKVVQCVV 388
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 76/176 (43%), Gaps = 3/176 (1%)
Query: 73 SVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN 132
+ + +L+++ ++K PN ++ +I +F+ +++R++ E++ D +N
Sbjct: 220 AALQLLDEFPQQKS-RPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERI--EPDTITFN 276
Query: 133 VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
++ GR+ + I+ L M C P+ T+ VL L+ K E + + +
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW 336
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+ ++ GLCE ++ +VL + P + ++ + K N
Sbjct: 337 GMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNN 392
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 169/328 (51%), Gaps = 5/328 (1%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKR--KDYNPNEALYTLIINKLAQAKRFDAIEDI 113
++P++V+K+ +D ++V + + Y +++ + ++ +L A +F A ED+
Sbjct: 14 ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73
Query: 114 MQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
+ R+K+E C S+ ++ + YG + R ++ M ++C PS K + VL +L
Sbjct: 74 IVRMKIEN-CVVSEDILLSICRGYGRVH-RPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 131
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN-GNLEAAFYVLDEFPKQNCEPN 232
V Y + ++G+ LN+L+K LC N G ++A + E PK+ C+P+
Sbjct: 132 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 191
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
TY TL+ GLC G ++EA L M + VT+ LI+GL V+E M+ LE
Sbjct: 192 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLE 251
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
MK KG PN +Y ++ GL R +A EL M+ P+ V+Y LI GLC ++
Sbjct: 252 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ 311
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+++ +L +M QG P G++ +++
Sbjct: 312 KIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 127/285 (44%), Gaps = 49/285 (17%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G + ++ +MP C P T+ +++ L E + ++T +
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L+ GLC + N++ A L+E + EPNV TYS+LM GLC+ G +A L E M +
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G + VT+ LI+GL K+ K++E ++LL+RM +G P++ Y +V+ G +F E
Sbjct: 291 RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFRE 350
Query: 322 AKELVGRMICERMSPSFVSY-------KKLIHGLCN------------------------ 350
A + MI ++P+ +++ +++ GLC
Sbjct: 351 AANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVET 410
Query: 351 --------------QKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
QK V+ VD ++V G +P G W+ ++G
Sbjct: 411 LESLVKCLCKKGEFQKAVQLVD----EIVTDGCIPSKGTWKLLIG 451
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-- 142
KD P YT +IN L +K D ++ +K S G NV M G
Sbjct: 221 KDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK-------SKGIEPNVFTYSSLMDGLC 273
Query: 143 ---RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
R +A+E M + C P++ T+ ++ L + E + G++ DA
Sbjct: 274 KDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAG 333
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN-------VRTYSTLMHGLCEKGNVEEA 252
++ G C A LDE PN V+T + ++ GLC A
Sbjct: 334 LYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRA 392
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
F L M S GI + T L+ L K+G+ ++ ++L++ + GC P+ +++ ++
Sbjct: 393 FTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGH 452
Query: 313 LLDKKRFPEAKELVGR 328
LDK EA + + R
Sbjct: 453 TLDKTIVGEASDTLLR 468
>sp|Q9LQQ1|PPR20_ARATH Pentatricopeptide repeat-containing protein At1g07740,
mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2
SV=1
Length = 459
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 191/374 (51%), Gaps = 12/374 (3%)
Query: 12 RQSIIQSLSSASTITRKRTFALASPSASHQDSDHH--AYKLNHKDWLSPTEVLKIFSNLR 69
R+ + L + I +R + + P + + H +K K W L +
Sbjct: 2 RRRLSSVLINNQCIASQRHYHTSRPEKPTKKASSHEPTHKFTRKPW-EEVPFLTDLKEIE 60
Query: 70 DPISVISVLNQYSK---RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
DP +S+ +QY + R DY P+ Y+ +I KLA+++ FDA++ I++ ++ + R
Sbjct: 61 DPEEALSLFHQYQEMGFRHDY-PS---YSSLIYKLAKSRNFDAVDQILRLVRYRNV-RCR 115
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+ F +I+ YG AG + KAI+ + S++C ++++ N ++N+LV + + +
Sbjct: 116 ESLFMGLIQHYGK-AGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFF 174
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
A + + ++ NIL+KG + + EAA V DE + +P+V TY++L+ LC
Sbjct: 175 DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRN 234
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
++ +A LLE M + I + VTF +L+ GL +G+ E KL+ M+ +GC P +Y
Sbjct: 235 DDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNY 294
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ L + R EAK L+G M R+ P V Y L++ LC + V + VL +M
Sbjct: 295 GILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQM 354
Query: 367 QGFVPRMGMWREIV 380
+G P +R ++
Sbjct: 355 KGCKPNAATYRMMI 368
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 9/194 (4%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G ++A + +FDM C P + + ++++ L E + + K ++ D
Sbjct: 270 GEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIY 329
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ LC + A+ VL E + C+PN TY ++ G C + + +L M +
Sbjct: 330 NILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLA 389
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
TF +++GL K G ++ +LE M K S ++Q +L L K
Sbjct: 390 SRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKD---- 445
Query: 322 AKELVGRMICERMS 335
G + CE +S
Sbjct: 446 -----GGVYCEALS 454
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA L DM P+ TF L++ L Y E + + G + I
Sbjct: 237 MGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGI 296
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ L + G ++ A +L E K+ +P+V Y+ L++ LC + V EA+ +L M+ +G
Sbjct: 297 LMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ T+ ++I G + + G+ +L M P A++ ++ GL+ A
Sbjct: 357 CKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHAC 416
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLC 349
++ M + +S +++ L+ LC
Sbjct: 417 FVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 83/218 (38%), Gaps = 44/218 (20%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK----------------- 246
L L E + E A + ++ + + +YS+L++ L +
Sbjct: 52 FLTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN 111
Query: 247 ------------------GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
G+V++A + ++ S + N LI+ L G++E+
Sbjct: 112 VRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAK 171
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ K PNS S+ ++ G LDK + A ++ M+ + PS V+Y LI L
Sbjct: 172 SFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFL 231
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
C + +L+ M+++ P VTFG
Sbjct: 232 CRNDDMGKAKSLLEDMIKKRIRP---------NAVTFG 260
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 66/158 (41%), Gaps = 2/158 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P Y ++++ L + R D + ++ +K ++ D YN++ + R+ +A
Sbjct: 289 PGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRI--KPDVVIYNILVNHLCTECRVPEAY 346
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L +M C P+ T+ ++++ + + + + ++ GL
Sbjct: 347 RVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGL 406
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ GNL+ A +VL+ K+N + L+ LC K
Sbjct: 407 IKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIK 444
>sp|Q8LDU5|PP298_ARATH Pentatricopeptide repeat-containing protein At4g01400,
mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2
SV=2
Length = 466
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 181/333 (54%), Gaps = 4/333 (1%)
Query: 57 SPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQR 116
SPT V K+ ++ DP+ + + S++ ++ + + + ++I KL + + F+ I+D++ +
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAK 109
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
+ + F Y +IK+Y A K + T + M +N P K N +L++LVS
Sbjct: 110 HRSSGYPLTGEIFTY-LIKVYAE-AKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSH 167
Query: 177 KLYGEIQ-GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ Y + ++ S+ GV + N+L++ C N +L A+ + + +++ P+V +
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y L+ G C KG V A LL+ M ++G D +++ L++ L ++ ++ E KLL RMK
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
KGC P+ Y ++ G + R +A++++ M+ SP+ VSY+ LI GLC+Q + +
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
+ L++M+ +GF P + +V G +FGK
Sbjct: 348 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 380
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 2/191 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K + P+ YT ++N L + + ++ R+K+ K C D YN + + R
Sbjct: 254 KGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL-KGCN-PDLVHYNTMILGFCREDRA 311
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A + L DM S C P+ ++ ++ L ++ E + G N L
Sbjct: 312 MDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCL 371
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+KG C G +E A V++ K + T+ ++ +C + E+ LE E I
Sbjct: 372 VKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEI 431
Query: 265 DADTVTFNILI 275
DT ++ I
Sbjct: 432 TGDTRIVDVGI 442
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 61/169 (36%), Gaps = 35/169 (20%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+++ A+E L DM + P ++ +LN L E + G D
Sbjct: 239 GQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHY 298
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG-------------- 247
N ++ G C A VLD+ C PN +Y TL+ GLC++G
Sbjct: 299 NTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMIS 358
Query: 248 ---------------------NVEEAFGLLERMESEGIDADTVTFNILI 275
VEEA ++E + G + T+ ++I
Sbjct: 359 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 407
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 158/307 (51%), Gaps = 8/307 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L PIS + K + ++ + +I A + FD++E ++ RI++E
Sbjct: 55 LEAPISE-KMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIER 113
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
F V + YG A KA++ M + C SVK+FN VLN++++ LY Y
Sbjct: 114 SFIV-VFRAYGK-AHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY 171
Query: 187 ----TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
S + + + N+++K LC+ ++ A V P++ C P+ TY TLM G
Sbjct: 172 DYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDG 231
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC++ ++EA LL+ M+SEG V +N+LI GL K+G + KL++ M KGC PN
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN 291
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+Y +++GL K + +A L+ RM+ + P+ V+Y LI+GL Q+ D +L
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLS 351
Query: 363 KMVQQGF 369
M ++G+
Sbjct: 352 SMEERGY 358
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 137/283 (48%), Gaps = 2/283 (0%)
Query: 86 DYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
+ +PN + L+I L + + D ++ + + E+ C DG+ Y + RI
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMP-ERKC-LPDGYTYCTLMDGLCKEERID 239
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
+A+ L +M S C PS +N++++ L + + + G + N L+
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
GLC G L+ A +L+ C PN TY TL++GL ++ +A LL ME G
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ +++LISGL K+GK EE M L +M KGC PN Y ++ GL + + EAKE+
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
+ RMI P+ +Y L+ G L E+ V K+M + G
Sbjct: 420 LNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +AIE MP C P T+ +++ L + E + G N+
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC+ G+L ++D + C PN TY+TL+HGLC KG +++A LLERM S
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+ LI+GL KQ + + ++LL M+ +G + N Y ++ GL + + EA
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L +M + P+ V Y L+ GLC + + +L +M+ G +P
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 131/263 (49%), Gaps = 4/263 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NMAGRISK 146
+P+ +Y ++I+ L + + ++ + + K C + YN + I+G + G++ K
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL-KGC-VPNEVTYNTL-IHGLCLKGKLDK 310
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ L M S C P+ T+ ++N LV + + + +S + G ++ ++L+
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GL + G E A + + ++ C+PN+ YS L+ GLC +G EA +L RM + G
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ T++ L+ G K G EE +++ + M GC N Y ++ GL R EA +
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 327 GRMICERMSPSFVSYKKLIHGLC 349
+M+ + P V+Y +I GLC
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLC 513
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 136/300 (45%), Gaps = 11/300 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PNE Y +I+ L + D +++R+ V C +D + +I R + A+
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERM-VSSKCIPNDVTYGTLINGLVKQR-RATDAV 347
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M + ++++++ L E ++ A+ G + + ++L+ GL
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G A +L+ C PN TYS+LM G + G EEA + + M+ G +
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+++LI GL G+V+E M + +M G P++ +Y ++ GL A +L
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Query: 329 MICE---RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
M+C+ + P V+Y L+ GLC QK + +L M+ +G P +++ C TF
Sbjct: 528 MLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDP------DVITCNTF 581
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 126/273 (46%), Gaps = 23/273 (8%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN +Y+++++ L + + + ++I+ R+ + C + + Y+ + G
Sbjct: 391 KGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM-IASGC-LPNAYTYSSLMKGFFKTGLC 448
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A++ +M C + ++++++ L E +++ +G++ D + +
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 205 LKGLCENGNLEAAFYVLDEF-----PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+KGLC G+++AA + E PK +P+V TY+ L+ GLC + ++ A LL M
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKS--QPDVVTYNILLDGLCMQKDISRAVDLLNSM 566
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
G D D +T N ++ L + K C + +E++ LL ++R
Sbjct: 567 LDRGCDPDVITCNTFLNTLSE--------------KSNSCDKGRSFLEELVVRLLKRQRV 612
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
A +V M+ + ++P ++ ++ +C K
Sbjct: 613 SGACTIVEVMLGKYLAPKTSTWAMIVREICKPK 645
>sp|Q3E9F0|PP392_ARATH Pentatricopeptide repeat-containing protein At5g18475
OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1
Length = 506
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 165/318 (51%), Gaps = 14/318 (4%)
Query: 55 WLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIM 114
++S + + RDP V+ + N+ S++K +N N A Y+++++ L + K+F A++ I+
Sbjct: 53 FISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAIL 112
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSY--NCWPSVKTFNLVLNL 172
++K E CRF + F N+++ + + + +F++ PS+ + LNL
Sbjct: 113 HQMKYET-CRFQESLFLNLMRHFSR--SDLHDKVMEMFNLIQVIARVKPSLNAISTCLNL 169
Query: 173 LVSAKLYGEI----QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
L+ + GE+ + + + LG++ + C NIL+K C+NG++ AF V++E +
Sbjct: 170 LIDS---GEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSG 226
Query: 229 CE-PNVRTYSTLMHGLCEKGNVEEAFGLLERMES-EGIDADTVTFNILISGLRKQGKVEE 286
PN TYSTLM L +EA L E M S EGI D VTFN++I+G + G+VE
Sbjct: 227 ISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVER 286
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIH 346
K+L+ MK GC PN +Y ++ G + EAK+ + + V Y L++
Sbjct: 287 AKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 347 GLCNQKLVEDVDWVLKKM 364
C ++ +L +M
Sbjct: 347 CFCRNGETDEAMKLLGEM 364
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 1/222 (0%)
Query: 160 WPSVKTFNLVLNLLVSAKLYGEIQGIYTSA-AKLGVEIDACCLNILLKGLCENGNLEAAF 218
+P+ T++ +++ L + E ++ +K G+ D N+++ G C G +E A
Sbjct: 229 YPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAK 288
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
+LD K C PNV YS LM+G C+ G ++EA + ++ G+ DTV + L++
Sbjct: 289 KILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCF 348
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
+ G+ +E MKLL MK C ++ +Y +L GL + R EA +++ + E + +
Sbjct: 349 CRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNK 408
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
SY+ +++ LC +E L M ++G P W E+V
Sbjct: 409 GSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 4/263 (1%)
Query: 143 RISKAIETLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R +A+E DM S P TFN+++N A + I K G +
Sbjct: 247 RSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNY 306
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ L+ G C+ G ++ A DE K + + Y+TLM+ C G +EA LL M++
Sbjct: 307 SALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKA 366
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
ADT+T+N+++ GL +G+ EE +++L++ +G + N SY+ +L L +
Sbjct: 367 SRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEK 426
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A + + M + P ++ +L+ LC E VL ++ G +P W +V
Sbjct: 427 AVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVE 486
Query: 382 CVTFGKDNRNRVYVTETVDSLAS 404
+ R V+V E +DSL S
Sbjct: 487 SIC---KERKLVHVFELLDSLVS 506
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 130/278 (46%), Gaps = 3/278 (1%)
Query: 89 PNEALYTLIINKL-AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
PN Y+ +++ L A ++ +A+E I E + D +NV+ AG + +A
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGIS--PDPVTFNVMINGFCRAGEVERA 287
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M C P+V ++ ++N E + + K G+++D L+
Sbjct: 288 KKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C NG + A +L E C + TY+ ++ GL +G EEA +L++ SEG+ +
Sbjct: 348 FCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLN 407
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
++ I+++ L G++E+ +K L M +G +P+ A++ E++ L + ++
Sbjct: 408 KGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLI 467
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
+ + P S+ ++ +C ++ + V +L +V
Sbjct: 468 GFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 152/316 (48%), Gaps = 1/316 (0%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
L P V + +DP+ + + N K + + Y +I KL +F+A+E+++
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
++ +G + +K YG G++ +A+ M Y+C P+V ++N ++++LV
Sbjct: 65 DMRENVGNHMLEGVYVGAMKNYGR-KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 123
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
+ + + +Y G+ D I +K C+ AA +L+ Q CE NV
Sbjct: 124 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 183
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y T++ G E+ E + L +M + G+ TFN L+ L K+G V+E KLL+++
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
+G PN +Y + GL + A +VG +I + P ++Y LI+GLC +
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 356 DVDWVLKKMVQQGFVP 371
+ + L KMV +G P
Sbjct: 304 EAEVYLGKMVNEGLEP 319
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 117/228 (51%), Gaps = 6/228 (2%)
Query: 163 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLD 222
+ TFN +L +L E + + K GV + N+ ++GLC+ G L+ A ++
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 223 EFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQG 282
+Q +P+V TY+ L++GLC+ +EA L +M +EG++ D+ T+N LI+G K G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 283 KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYK 342
V+ +++ G P+ +Y+ ++ GL + A L + + + P+ + Y
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 343 KLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV------GCVT 384
LI GL NQ ++ + + +M ++G +P + + +V GCV+
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 137/284 (48%), Gaps = 4/284 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +I L + +F E + ++ E L D + YN + I G G + +
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL--EPDSYTYNTL-IAGYCKGGMVQLA 340
Query: 149 ETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E + +N + P T+ +++ L ++ A G++ + N L+KG
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L G + A + +E ++ P V+T++ L++GLC+ G V +A GL++ M S+G D
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
TFNILI G Q K+E +++L+ M G P+ +Y +L GL +F + E
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + +P+ ++ L+ LC + +++ +L++M + P
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 123/249 (49%), Gaps = 3/249 (1%)
Query: 125 FSDGFFYNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
F D F +N++ I+G + ++ A+E L M P V T+N +LN L + ++
Sbjct: 458 FPDIFTFNIL-IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
Y + + G + NILL+ LC L+ A +L+E ++ P+ T+ TL+ G
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 244 CEKGNVEEAFGLLERME-SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
C+ G+++ A+ L +ME + + + T T+NI+I ++ V KL + M + P+
Sbjct: 577 CKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+Y+ ++ G + + M+ PS + ++I+ LC + V + ++
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696
Query: 363 KMVQQGFVP 371
+MVQ+G VP
Sbjct: 697 RMVQKGLVP 705
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 126/290 (43%), Gaps = 12/290 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGNMA-GR 143
PN Y L I L Q D ++ C G +VI IYG +
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVG-------CLIEQGPKPDVITYNNLIYGLCKNSK 301
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A L M + P T+N ++ + + I A G D
Sbjct: 302 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 361
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ GLC G A + +E + +PNV Y+TL+ GL +G + EA L M +G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + TFNIL++GL K G V + L++ M KG +P+ ++ +++G + + A
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
E++ M+ + P +Y L++GLC EDV K MV++G P +
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 116/254 (45%), Gaps = 5/254 (1%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G +S A + M S +P + TFN++++ + I GV+ D
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL GLC+ E ++ C PN+ T++ L+ LC ++EA GLLE M++
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERM-KGKGCYPNSASYQEVLYGLLDKKRFP 320
+ ++ D VTF LI G K G ++ L +M + ++ +Y +++ +K
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVT 619
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A++L M+ + P +Y+ ++ G C V L +M++ GF+P + ++
Sbjct: 620 MAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVI 679
Query: 381 GCVTFGKDNRNRVY 394
C+ +RVY
Sbjct: 680 NCLCV----EDRVY 689
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 109/223 (48%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G ++A+ + P+V +N ++ L + + E + ++ G+ +
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
NIL+ GLC+ G + A ++ + P++ T++ L+HG + +E A +L+ M
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+D D T+N L++GL K K E+ M+ + M KGC PN ++ +L L ++ E
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
A L+ M + ++P V++ LI G C ++ + +KM
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+K G ++ A V + +CEP V +Y+ +M L + G ++A + RM GI
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +F I + K + ++LL M +GC N +Y V+ G ++ E E
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
L G+M+ +S ++ KL+ LC + V++ + +L K++++G +P +
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL 251
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 85 KDYNPNEALYTLIINKLA-QAKRFDAIE--DIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K Y P+ + ++I+ + Q K +A+E D+M V+ D + YN +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD-----PDVYTYNSLLNGLCKT 509
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ +ET M C P++ TFN++L L + E G+ V DA
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G C+NG+L+ A+ + + + + TY+ ++H EK NV A L + M
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
+ D T+ +++ G K G V G K L M G P+ + V+ L + R
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689
Query: 321 EAKELVGRMICERMSPSFVS 340
EA ++ RM+ + + P V+
Sbjct: 690 EAAGIIHRMVQKGLVPEAVN 709
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 8/137 (5%)
Query: 253 FGLLERMESEGIDADTVTFNILISGLR--------KQGKVEEGMKLLERMKGKGCYPNSA 304
+G E ME +D N ++ G+ ++GKV+E + + ERM C P
Sbjct: 53 YGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVF 112
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
SY ++ L+D F +A ++ RM ++P S+ + C +L M
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
Query: 365 VQQGFVPRMGMWREIVG 381
QG + + +VG
Sbjct: 173 SSQGCEMNVVAYCTVVG 189
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 192/415 (46%), Gaps = 52/415 (12%)
Query: 18 SLSSASTITRKR-TFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLR---DPIS 73
S+S A T+T + L PS++ + H+ L+ D +K+ +LR D +
Sbjct: 13 SISQAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTD-------VKLLDSLRSQPDDSA 65
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ + N SK+ +++P ALY I+ +L ++ FD ++ I++ +K + C F +
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSR-CEMGTSTFLIL 124
Query: 134 IKIYGN--MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
I+ Y + I ++ + D + P +N +LNLLV ++ + +
Sbjct: 125 IESYAQFELQDEILSVVDWMID--EFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSV 182
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM----------- 240
G++ D N+L+K LC L A +L++ P P+ +T++T+M
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 241 ------------------------HGLCEKGNVEEAFGLLERMESE-GIDADTVTFNILI 275
HG C++G VE+A ++ M ++ G D TFN L+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+GL K G V+ +++++ M +G P+ +Y V+ GL EA E++ +MI S
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
P+ V+Y LI LC + VE+ + + + +G +P + + ++ + +++R
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 143/306 (46%), Gaps = 2/306 (0%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++ + + S + + P++ + ++N L +A +IM + E D + YN +
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY--DPDVYTYNSV 336
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G + +A+E L M + +C P+ T+N +++ L E + G+
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D C N L++GLC N A + +E + CEP+ TY+ L+ LC KG ++EA
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+L++ME G +T+N LI G K K E ++ + M+ G NS +Y ++ GL
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
+R +A +L+ +MI E P +Y L+ C ++ +++ M G P +
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 375 MWREIV 380
+ ++
Sbjct: 577 TYGTLI 582
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 132/248 (53%), Gaps = 4/248 (1%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D F YN++ G++ +A+ L M C SV T+N +++ A E + I+
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
GV ++ N L+ GLC++ +E A ++D+ + +P+ TY++L+ C
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G++++A +++ M S G + D VT+ LISGL K G+VE KLL ++ KG +Y
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICE-RMSPSFVSYKKLIHGLCN--QKLVEDVDWVLKK 363
V+ GL K++ EA L M+ + P VSY+ + GLCN + E VD+ L +
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF-LVE 672
Query: 364 MVQQGFVP 371
++++GFVP
Sbjct: 673 LLEKGFVP 680
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 157/349 (44%), Gaps = 38/349 (10%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+E +T ++ + D I +++ VE C +S+ NVI GR+ A+
Sbjct: 222 PDEKTFTTVMQGYIEEGDLDGALRIREQM-VEFGCSWSN-VSVNVIVHGFCKEGRVEDAL 279
Query: 149 ETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ +M + + + P TFN ++N L A I + G + D N ++ G
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA--------------- 252
LC+ G ++ A VLD+ ++C PN TY+TL+ LC++ VEEA
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 253 --------------------FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
L E M S+G + D T+N+LI L +GK++E + +L+
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
+M+ GC + +Y ++ G + EA+E+ M +S + V+Y LI GLC +
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVDS 401
VED ++ +M+ +G P + ++ G D + + + + S
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 161/351 (45%), Gaps = 13/351 (3%)
Query: 44 DHHAYKLNHKDWLSPTEVLKIFSNL---RDPISVISVLNQYSKRKDYNPNEALYTLIINK 100
++ Y N D + T +++ F L R ++ +L P+ Y ++I+
Sbjct: 126 ENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV----PDVITYNVMISG 181
Query: 101 LAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCW 160
+A + ++ R+ V D YN I +G++ +A+E L M +C+
Sbjct: 182 YCKAGEINNALSVLDRMSVS-----PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P V T+ +++ G + G D N+L+ G+C+ G L+ A
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L++ P C+PNV T++ ++ +C G +A LL M +G VTFNILI+ L +
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
+G + + +LE+M GC PNS SY +L+G +K+ A E + RM+ P V+
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNR 390
Y ++ LC VED +L ++ +G P + + ++ G GK +
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 154/307 (50%), Gaps = 3/307 (0%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV 133
+ VL++ +R Y P+ YT++I + ++ ++ ++ C D YNV
Sbjct: 223 AMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMR-DRGCT-PDVVTYNV 279
Query: 134 IKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG 193
+ GR+ +AI+ L DMPS C P+V T N++L + S + + + + + G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 194 VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAF 253
NIL+ LC G L A +L++ P+ C+PN +Y+ L+HG C++ ++ A
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 254 GLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGL 313
LERM S G D VT+N +++ L K GKVE+ +++L ++ KGC P +Y V+ GL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 314 LDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+ +A +L+ M + + P ++Y L+ GL + V++ + + G P
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 374 GMWREIV 380
+ I+
Sbjct: 520 VTFNSIM 526
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 138/285 (48%), Gaps = 6/285 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y +++N + + R D + + C+ + +N+I GR A
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG-CQ-PNVITHNIILRSMCSTGRWMDAE 329
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ L DM PSV TFN+++N L L G I + G + ++ N LL G
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+ ++ A L+ + C P++ TY+T++ LC+ G VE+A +L ++ S+G
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+T+N +I GL K GK + +KLL+ M+ K P++ +Y ++ GL + + EA +
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 329 MICERMS--PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
ERM P+ V++ ++ GLC + + L M+ +G P
Sbjct: 510 F--ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 137/289 (47%), Gaps = 12/289 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-----FYNVIKIYGNMAGR 143
PN + +I+ + R+ E ++ + GF +N++ + G
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADM-------LRKGFSPSVVTFNILINFLCRKGL 359
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +AI+ L MP + C P+ ++N +L+ K G D N
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L LC++G +E A +L++ + C P + TY+T++ GL + G +A LL+ M ++
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ DT+T++ L+ GL ++GKV+E +K + G PN+ ++ ++ GL ++ A
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
+ + MI P+ SY LI GL + + ++ +L ++ +G + +
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 3/176 (1%)
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L+ + G LE F L+ P++ +TL+ G C G +A +LE +E G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D +T+N++ISG K G++ + +L+RM P+ +Y +L L D + +A E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ RM+ P ++Y LI C V +L +M +G P + + +V
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 2/219 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++ + K+ D + ++R+ V + C + D YN + G++ A+
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERM-VSRGC-YPDIVTYNTMLTALCKDGKVEDAV 434
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L + S C P + T+N V++ L A G+ + ++ D + L+ GL
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
G ++ A EF + PN T++++M GLC+ + A L M + G +
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++ ILI GL +G +E ++LL + KG S++ Q
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQ 593
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 158/326 (48%), Gaps = 30/326 (9%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD---GFF----------- 130
+ + P++ Y ++N L + R DA +D+ RI ++ F+ GF
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 131 -------YNVIK--------IYGNMA-GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
Y ++ IYG G + A+E L DM + C P+V ++ ++++
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E + + G++ + N L+ C+ + A + E P++ C+P+V
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T+++L+ GLCE ++ A LL M SEG+ A+TVT+N LI+ ++G+++E KL+ M
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+G + +Y ++ GL +A+ L +M+ + +PS +S LI+GLC +V
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
E+ K+MV +G P + + ++
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLI 641
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 161/340 (47%), Gaps = 24/340 (7%)
Query: 52 HKDWLSPTEVLKIFSNLRDPISVISVLNQYS---KRKDYNPNEALYTLIINKLAQAKRFD 108
HK ++P ++ K+ L P++V + + +S + Y + +Y ++I KL F
Sbjct: 74 HK--ITPFQLYKL---LELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFK 128
Query: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFN 167
I+ ++ ++K E + F + F ++++ Y + AG + + +M + Y+C P+ K++N
Sbjct: 129 TIDRLLIQMKDEGIV-FKESLFISIMRDY-DKAGFPGQTTRLMLEMRNVYSCEPTFKSYN 186
Query: 168 LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ 227
+VL +LVS + ++ + +++K C +++A +L + K
Sbjct: 187 VVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH 246
Query: 228 NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
C PN Y TL+H L + V EA LLE M G D TFN +I GL K ++ E
Sbjct: 247 GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 306
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
K++ RM +G P+ +Y ++ GL R AK+L R+ P V + LIHG
Sbjct: 307 AKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHG 362
Query: 348 LCNQKLVEDVDWVLKKMVQQ-GFVPRM--------GMWRE 378
++D VL MV G VP + G W+E
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 2/294 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
+ K PN YT++++ + + D +++ + + L + GF N +
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF--NCLISAFCKEH 473
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RI +A+E +MP C P V TFN +++ L + GV + N
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G ++ A +++E Q + TY++L+ GLC G V++A L E+M +
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G ++ NILI+GL + G VEE ++ + M +G P+ ++ ++ GL R +
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
+ ++ E + P V++ L+ LC V D +L + ++ GFVP W
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 8/311 (2%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
V+K F + + S +S+L +K PN +Y +I+ L++ R + +++ + +
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCV-PNSVIYQTLIHSLSKCNRVNEALQLLEEMFL- 280
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+ D +N + + RI++A + + M P T+ ++N L
Sbjct: 281 -MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL-DEFPKQNCEPNVRTYSTL 239
+ ++ K + I N L+ G +G L+ A VL D P+V TY++L
Sbjct: 340 AAKDLFYRIPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
++G ++G V A +L M ++G + ++ IL+ G K GK++E +L M G
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
PN+ + ++ + R PEA E+ M + P ++ LI GLC ++ W
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 360 VLKKMVQQGFV 370
+L+ M+ +G V
Sbjct: 516 LLRDMISEGVV 526
Score = 39.7 bits (91), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 61/147 (41%), Gaps = 1/147 (0%)
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
Y L+ L G + LL +M+ EGI F ++ K G + +L+ M
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 295 KG-KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
+ C P SY VL L+ A + M+ ++ P+ ++ ++ C
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ +L+ M + G VP +++ ++
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLI 259
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 174/367 (47%), Gaps = 15/367 (4%)
Query: 12 RQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHK----DWLSPTEVLKIFSN 67
RQ QSL T K F + S ++ +S H + K D + T+++K F
Sbjct: 78 RQQHSQSLGFRDTQMLK-IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFT 136
Query: 68 LRD---PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
LR+ + V+ +L ++ + P+ Y +IN + R D ++ R++ +
Sbjct: 137 LRNIPKAVRVMEILEKFGQ-----PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS- 190
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQG 184
D YN++ G++ A++ L + S NC P+V T+ +++ + E
Sbjct: 191 -PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALK 249
Query: 185 IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
+ G++ D N +++G+C+ G ++ AF ++ + CEP+V +Y+ L+ L
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+G EE L+ +M SE D + VT++ILI+ L + GK+EE M LL+ MK KG P++
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
SY ++ + R A E + MI + P V+Y ++ LC + + K+
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 365 VQQGFVP 371
+ G P
Sbjct: 430 GEVGCSP 436
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 138/300 (46%), Gaps = 7/300 (2%)
Query: 74 VISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRF--SDGFFY 131
+ VLNQ + P YT++I +A + D ++ E L R D F Y
Sbjct: 212 ALKVLNQLLS-DNCQPTVITYTILI----EATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
N I G + +A E + ++ C P V ++N++L L++ + E + + T
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
+ + +IL+ LC +G +E A +L ++ P+ +Y L+ C +G ++
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
A LE M S+G D V +N +++ L K GK ++ +++ ++ GC PNS+SY +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L A ++ M+ + P ++Y +I LC + +V++ +L M F P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 2/243 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y+++I L + + + ++++ +K + L D + Y+ + GR+ A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT--PDAYSYDPLIAAFCREGRLDVA 387
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
IE L M S C P + +N VL L + I+ ++G ++ N +
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L +G+ A +++ E +P+ TY++++ LC +G V+EAF LL M S
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT+NI++ G K ++E+ + +LE M G GC PN +Y ++ G+ EA EL
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAN 567
Query: 328 RMI 330
++
Sbjct: 568 DLV 570
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 129/298 (43%), Gaps = 2/298 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y II + + D ++++ +++ K C D YN++ G+ +
Sbjct: 261 PDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL-KGCE-PDVISYNILLRALLNQGKWEEGE 318
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + M S C P+V T+++++ L E + + G+ DA + L+
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G L+ A L+ C P++ Y+T++ LC+ G ++A + ++ G ++
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
++N + S L G + ++ M G P+ +Y ++ L + EA EL+
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFG 386
M PS V+Y ++ G C +ED VL+ MV G P + ++ + F
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 556
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +GN + ++L+ ++ P+V + L+ G N+ +A ++E +E G D
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+N LI+G K ++++ ++L+RM+ K P++ +Y ++ L + + A +++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++ + P+ ++Y LI + V++ ++ +M+ +G P M + I+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 280 KQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS-PSF 338
+ G E + LLE M KG P+ +++ G + P+A ++ I E+ P
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME--ILEKFGQPDV 158
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+Y LI+G C ++D VL +M + F P + ++G
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIG 201
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 146/287 (50%), Gaps = 3/287 (1%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE-KLCRFSDGFFYNVIKIYGNMAGRIS 145
+ N Y I+ KL++A+ FD +E +M ++ + + F ++++ YG +AGR
Sbjct: 79 FTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYG-LAGRYE 137
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY-TSAAKLGVEIDACCLNIL 204
++ +P + SV++ N +LN+L+ + + + ++ S G+ + N+L
Sbjct: 138 SSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLL 197
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+K LC+ ++E+A+ VLDE P PN+ TY+T++ G +G++E A +LE M G
Sbjct: 198 VKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGW 257
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D T+ +L+ G K G+ E +++ M+ PN +Y ++ L +K+ EA+
Sbjct: 258 YPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARN 317
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ M+ P K+I LC V++ + +KM++ +P
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 42/262 (16%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR--FSDGFFYNVIKIYGNMAGRISK 146
PN YT I+ ++ + +++ E L R + D Y V+ GR S+
Sbjct: 224 PNLVTYTTILGGYVARGDMESAKRVLE----EMLDRGWYPDATTYTVLMDGYCKLGRFSE 279
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA--CC---- 200
A + DM P+ T+ +++ L K GE + ++ + D+ CC
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 201 -----------------------------LNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
L+ L+ LC+ G + A + DEF K + P
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-P 398
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
++ TY+TL+ G+CEKG + EA L + M + T+N+LI GL K G V+EG+++L
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 458
Query: 292 ERMKGKGCYPNSASYQEVLYGL 313
E M GC+PN ++ + GL
Sbjct: 459 EEMLEIGCFPNKTTFLILFEGL 480
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 6/246 (2%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
++ + PNE Y ++I L + K+ ++ + +E+ VI
Sbjct: 288 EKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM-LERSFMPDSSLCCKVIDALCE-DH 345
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ +A M NC P + +++ L E + ++ K G N
Sbjct: 346 KVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYN 404
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G+CE G L A + D+ ++ C+PN TY+ L+ GL + GNV+E +LE M
Sbjct: 405 TLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEI 464
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLER--MKGKGCYPNSASYQEVLYGLLDKKRFP 320
G + TF IL GL+K GK E+ MK++ M GK + + + G LDK P
Sbjct: 465 GCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESWELFLKKFAGELDKGVLP 524
Query: 321 EAKELV 326
KEL+
Sbjct: 525 -LKELL 529
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 272 NILISGLRK---QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF-------PE 321
N+ I LR G+ E M++ R+ G + S +L L+ +RF
Sbjct: 121 NLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKN 180
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+KE G ++P+ + L+ LC + +E VL ++ G VP + + I+G
Sbjct: 181 SKESFG------ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILG 234
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 161/314 (51%), Gaps = 4/314 (1%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
LSP VLK+ + ++P + ++ + ++ Y + +Y I+ +L++ + + + I++
Sbjct: 8 LSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVE 67
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPS-YNCWPSVKTFNLVLNLLV 174
I+ ++ C+ + +VIK YG + +A++ M + C P+++++N +LN V
Sbjct: 68 LIRSQE-CKCDEDVALSVIKTYGKNS-MPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
AK + +++ ++ GV + N+L+K C+ E A LD K+ +P+V
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER- 293
+YST+++ L + G +++A L + M G+ D +NILI G K+ + M+L +R
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
++ YPN ++ ++ GL R + ++ RM +Y LIHGLC+
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 354 VEDVDWVLKKMVQQ 367
V+ + V ++ ++
Sbjct: 306 VDKAESVFNELDER 319
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 133/287 (46%), Gaps = 7/287 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM-AGRISKA 147
PN + ++I+ L++ R D I +R+K + R D + Y+ + I+G AG + KA
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE--REKDLYTYSSL-IHGLCDAGNVDKA 309
Query: 148 IETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
++ V T+N +L K+ ++ K V I + NIL+K
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVS--YNILIK 367
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GL ENG ++ A + P + + TY +HGLC G V +A G+++ +ES G
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D + +I L K+ ++EE L++ M G NS ++ GL+ R EA +
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
M P+ VSY LI GLC + +K+M++ G+ P +
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 127/300 (42%), Gaps = 7/300 (2%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
D + + + Q + KD Y+ +I+ L A D E + + K D
Sbjct: 273 DCLKIWERMKQNEREKDLYT----YSSLIHGLCDAGNVDKAESVFNELDERKAS--IDVV 326
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN + G+I +++E M N ++ ++N+++ L+ E I+
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEHKNS-VNIVSYNILIKGLLENGKIDEATMIWRLM 385
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G D I + GLC NG + A V+ E +V Y++++ LC+K +
Sbjct: 386 PAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRL 445
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
EEA L++ M G++ ++ N LI GL + ++ E L M GC P SY +
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ GL +F EA V M+ P +Y L+ GLC + ++ + + +Q G
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 121/300 (40%), Gaps = 2/300 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K Y ++ Y + I+ L + +MQ +VE D + Y I R+
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGYVNKALGVMQ--EVESSGGHLDVYAYASIIDCLCKKKRL 445
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A + +M + + N ++ L+ GE K G NIL
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC+ G A + E + +P+++TYS L+ GLC ++ A L + G+
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ D + NILI GL GK+++ M ++ M+ + C N +Y ++ G A
Sbjct: 566 ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATV 625
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT 384
+ G M + P +SY ++ GLC + V G P + W +V V
Sbjct: 626 IWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 88/186 (47%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN++ AG+ +A + +M P +KT++++L L + ++
Sbjct: 502 YNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ G+E D NIL+ GLC G L+ A V+ +NC N+ TY+TLM G + G+
Sbjct: 562 QSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSN 621
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A + M G+ D +++N ++ GL V M+ + + G +P ++ ++
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Query: 311 YGLLDK 316
++++
Sbjct: 682 RAVVNR 687
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 2/170 (1%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+LK L N AAF + D + + Y ++ L E V ++E + S+
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK-GCYPNSASYQEVLYGLLDKKRFPE 321
D +I K ++ + + +RM+ GC P SY +L ++ K++ +
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVK 132
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ L ++P+ +Y LI C +K E L M ++GF P
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKP 182
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 67/174 (38%), Gaps = 39/174 (22%)
Query: 221 LDEFPKQ----NCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 276
LD F + CEP +R+Y+TL++ E + L E+ G+ + T+N+LI
Sbjct: 98 LDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI- 156
Query: 277 GLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
+M K KK F +A+ + M E P
Sbjct: 157 ----------------KMSCK------------------KKEFEKARGFLDWMWKEGFKP 182
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNR 390
SY +I+ L ++D + +M ++G P + + ++ KD++
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 144/298 (48%), Gaps = 2/298 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
KRK PN +Y II L + + E+ + + + D Y + G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI--LPDTVVYTTLIDGFCKRG 365
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
I A + ++M S + P V T+ +++ E ++ G+E D+
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C+ G+++ AF V + + C PNV TY+TL+ GLC++G+++ A LL M
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ + T+N +++GL K G +EE +KL+ + G ++ +Y ++ +A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+E++ M+ + + P+ V++ L++G C ++ED + +L M+ +G P + +V
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 137/290 (47%), Gaps = 12/290 (4%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKV--EKLCRFSDG---FFYNVIKIYGN 139
+D P+ YT II+ Q I D+++ K+ E C+ + F +I Y
Sbjct: 380 RDITPDVLTYTAIISGFCQ------IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
AG + A M C P+V T+ +++ L + K+G++ +
Sbjct: 434 -AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N ++ GLC++GN+E A ++ EF + TY+TLM C+ G +++A +L+ M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+G+ VTFN+L++G G +E+G KLL M KG PN+ ++ ++ +
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
A + M + P +Y+ L+ G C + +++ ++ ++M +GF
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 35/261 (13%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN------------------- 171
YN++ + GRI +A L M P V +++ V+N
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 172 ---LLVSAKLYGEIQGIYTSAAKL-------------GVEIDACCLNILLKGLCENGNLE 215
L ++ +YG I G+ KL G+ D L+ G C+ G++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
AA E ++ P+V TY+ ++ G C+ G++ EA L M +G++ D+VTF LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
+G K G +++ ++ M GC PN +Y ++ GL + A EL+ M +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 336 PSFVSYKKLIHGLCNQKLVED 356
P+ +Y +++GLC +E+
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEE 509
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 8/243 (3%)
Query: 144 ISKAIETLFDMP--SYNCWPS-VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV--EIDA 198
++ + FD+ +Y W S + F++ +LV L E + ++ G+ +D+
Sbjct: 153 VTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDS 212
Query: 199 CCLNILLKGLCENGNLEA-AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
C N+ L L ++ A A V EFP+ NV +Y+ ++H +C+ G ++EA LL
Sbjct: 213 C--NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 270
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
ME +G D ++++ +++G + G++++ KL+E MK KG PNS Y ++ L
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
+ EA+E MI + + P V Y LI G C + + +M + P + +
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 378 EIV 380
I+
Sbjct: 391 AII 393
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 2/239 (0%)
Query: 143 RISKAIETLFDMPSYN-CWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ + AI + P CW +V ++N+V++ + E + G D
Sbjct: 226 KTATAIIVFREFPEVGVCW-NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY 284
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
+ ++ G C G L+ + +++ ++ +PN Y +++ LC + EA M
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+GI DTV + LI G K+G + K M + P+ +Y ++ G E
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
A +L M C+ + P V++ +LI+G C ++D V M+Q G P + + ++
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 116/242 (47%), Gaps = 2/242 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN YT +I+ L + D+ +++ ++ K+ + F YN I +G I +A
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLH--EMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ + + + T+ +++ + + Q I G++ N+L+ G
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C +G LE +L+ + PN T+++L+ C + N++ A + + M S G+ D
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+ L+ G K ++E L + MKGKG + ++Y ++ G L +K+F EA+E+
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 328 RM 329
+M
Sbjct: 691 QM 692
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 14/235 (5%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV-------SAKLYGEIQGIYTSAAKLGV 194
G + A E L +M P++ T+N ++N L + KL GE + G+
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-------GL 522
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
D L+ C++G ++ A +L E + +P + T++ LM+G C G +E+
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LL M ++GI + TFN L+ + ++ + + M +G P+ +Y+ ++ G
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
+ EA L M + S S +Y LI G +K + V +M ++G
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
N + YT +++ ++ D ++I++ + + L F NV+ + G +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF--NVLMNGFCLHGMLEDG 580
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M + P+ TFN ++ IY GV D L+KG
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ N++ A+++ E + +V TYS L+ G ++ EA + ++M EG+ AD
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 268 TVTFNILISGLRKQGK 283
F+ S + +GK
Sbjct: 701 KEIFD-FFSDTKYKGK 715
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%), Gaps = 1/165 (0%)
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
F+ L + ++ + R + L + G + EA + E+M + G+ + N+ ++
Sbjct: 160 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR 219
Query: 278 LRKQG-KVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
L K K + + G N ASY V++ + R EA L+ M + +P
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+SY +++G C ++ V +++ M ++G P ++ I+G
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 145/300 (48%), Gaps = 5/300 (1%)
Query: 67 NLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
NLRD + V V+ SK PN Y+++I+ L + R + + ++ EK C+ S
Sbjct: 245 NLRDALKVFDVM---SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG-EKGCQPS 300
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
+ +IK + G I KA +M C P+V T+ ++++ L E G+
Sbjct: 301 TRTYTVLIKALCD-RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
K + N L+ G C++G + AF +L K+ C+PNVRT++ LM GLC
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
G +A LL+RM G+ D V++N+LI GL ++G + KLL M P+ ++
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ + + A +G M+ + +S V+ LI G+C D ++L+ +V+
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 108/212 (50%), Gaps = 10/212 (4%)
Query: 186 YTSAA--------KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTY 236
YT AA K+G +D+ LL G C NL A V D K+ C PN +Y
Sbjct: 210 YTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSY 269
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
S L+HGLCE G +EEAFGL ++M +G T T+ +LI L +G +++ L + M
Sbjct: 270 SILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP 329
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+GC PN +Y ++ GL + EA + +M+ +R+ PS ++Y LI+G C V
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389
Query: 357 VDWVLKKMVQQGFVPRMGMWREIV-GCVTFGK 387
+L M ++ P + + E++ G GK
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 136/301 (45%), Gaps = 5/301 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN YT++I+ L + + + + +++ +++ F YN + GR+ A
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI--FPSVITYNALINGYCKDGRVVPAF 391
Query: 149 ETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L M C P+V+TFN L+ L K Y + + G+ D N+L+ G
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH-LLKRMLDNGLSPDIVSYNVLIDG 450
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC G++ A+ +L + EP+ T++ +++ C++G + A L M +GI D
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
VT LI G+ K GK + + +LE + S +L L + E ++G
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFG 386
++ + PS V+Y L+ GL + +L+ M G +P + + I+ G FG
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 387 K 387
+
Sbjct: 631 R 631
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 9/243 (3%)
Query: 86 DYNPNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
D P+ +T IIN + + D A +M R + V K+ G
Sbjct: 471 DIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKV-----G 525
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ A+ L + + + N++L++L E + KLG+
Sbjct: 526 KTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYT 585
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GL +G++ +F +L+ C PNV Y+ +++GLC+ G VEEA LL M+
Sbjct: 586 TLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS 645
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG-LLDKKRFPE 321
G+ + VT+ +++ G GK++ ++ + M +G N Y +L G +L +K
Sbjct: 646 GVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDN 705
Query: 322 AKE 324
++E
Sbjct: 706 SEE 708
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 121/281 (43%), Gaps = 21/281 (7%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+G I+ + L M C P+V + +++N L E + + ++ GV +
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG--LCEKG--NVEEAFG-- 254
+++KG NG L+ A + ++ E N R YS+L+ G L +KG N EE+
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSD 713
Query: 255 -LLERMESEGIDADTVTFN-----------ILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
L + E I+ L++ L K+G+ +E L++ + +G +
Sbjct: 714 IALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE 773
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV-DWVL 361
A ++ KK+ + EL+ ++ PSF S+ +I GL + E + V+
Sbjct: 774 KA-MDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVM 832
Query: 362 KKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVDSL 402
+ + G V + G+ V C+ G + + V + VD L
Sbjct: 833 ELLTSNGVVEKSGVL-TYVECLMEGDETGDCSEVIDLVDQL 872
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 36/185 (19%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVE------ 285
N YS+L+ L + A+ RME++G + + +++ L K G E
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 286 -----------------------------EGMKLLERM-KGKGCYPNSASYQEVLYGLLD 315
+ +K+ + M K C PNS SY +++GL +
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGM 375
R EA L +M + PS +Y LI LC++ L++ + +M+ +G P +
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 376 WREIV 380
+ ++
Sbjct: 339 YTVLI 343
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 35/276 (12%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV-IKIYGNMAGRISKA 147
PN YT+IIN L Q R + E ++ ++ + + Y V +K Y N G++ +A
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS--PNHVTYTVMVKGYVN-NGKLDRA 670
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE-------------------IQGIYTS 188
+ET+ M + + ++ +L V ++ + I + +
Sbjct: 671 LETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISV 730
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV---RTYSTLMHGLCE 245
+LG I C+ L+ LC+ G + + ++ + E V + +M C
Sbjct: 731 VEQLGGCISGLCI-FLVTRLCKEGRTDES----NDLVQNVLERGVFLEKAMDIIMESYCS 785
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL-LERMKGKGCYPNSA 304
K + L+ + G +F ++I GL+K+G E +L +E + G S
Sbjct: 786 KKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSG 845
Query: 305 --SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
+Y E L + E +LV ++ C R P+F
Sbjct: 846 VLTYVECLMEGDETGDCSEVIDLVDQLHC-RERPTF 880
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 143/305 (46%), Gaps = 15/305 (4%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIE--DIMQRIKVEKLCRFS 126
D I ++S + + + P+ +Y II+ + DA+E D M+R V +
Sbjct: 157 DAIDLVSKMEEMG----FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR-----A 207
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D YN + +GR S A + DM + P+V TF V+++ V + E +Y
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ V+ D N L+ GLC +G ++ A +LD + C P+V TY+TL++G C+
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
V+E L M G+ DT+T+N +I G + G+ + ++ RM + PN +Y
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTY 384
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
+LYGL R +A L M + +Y +IHG+C VED + + +
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 367 QGFVP 371
+G P
Sbjct: 445 KGLKP 449
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 5/245 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
+D PN +T +I+ + +F + + ++ + C D F YN + M GR+
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYE--EMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A + L M + C P V T+N ++N +K E ++ A+ G+ D N +
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++G + G +AA + F + + PN+RTYS L++GLC VE+A L E M+ I
Sbjct: 356 IQGYFQAGRPDAAQEI---FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ D T+NI+I G+ K G VE+ L + KG P+ SY ++ G K+++ ++
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 472
Query: 325 LVGRM 329
L +M
Sbjct: 473 LYRKM 477
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 144/310 (46%), Gaps = 4/310 (1%)
Query: 63 KIFSNLRDPISVISVLNQYSKRKDYNPNEAL--YTLIINKLAQAKRFDAIEDIMQRIKVE 120
+ FS R +++ ++ + K P ++ ++ +++K+A++K +D + + ++V
Sbjct: 39 RTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVC 98
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+ D + YN++ R A+ + M + P V T + ++N
Sbjct: 99 GIGH--DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ + + ++G D N ++ G C+ G + A + D + + TY++L+
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
GLC G +A L+ M I + +TF +I K+GK E MKL E M +
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P+ +Y ++ GL R EAK+++ M+ + P V+Y LI+G C K V++ +
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 361 LKKMVQQGFV 370
++M Q+G V
Sbjct: 337 FREMAQRGLV 346
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
++N+V+N L + + K G E D ++ L+ G C+ + A ++ +
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ P+V Y+T++ G C+ G V +A L +RME +G+ AD VT+N L++GL G+
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ +L+ M + PN ++ V+ + + +F EA +L M + P +Y L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
I+GLC V++ +L MV +G +P + + ++
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 12/259 (4%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-----RISKAI 148
Y ++IN L + RF ++ V K+ +F G+ +V+ + + G R+ AI
Sbjct: 107 YNIVINCLCRCSRF-----VIALSVVGKMMKF--GYEPDVVTVSSLINGFCQGNRVFDAI 159
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ + M P V +N +++ L + ++ + GV DA N L+ GL
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C +G A ++ + ++ PNV T++ ++ ++G EA L E M +D D
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N LI+GL G+V+E ++L+ M KGC P+ +Y ++ G KR E +L
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 329 MICERMSPSFVSYKKLIHG 347
M + ++Y +I G
Sbjct: 340 MAQRGLVGDTITYNTIIQG 358
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
RT+ST + N+EE L +M V F+ ++S + K + + L
Sbjct: 39 RTFSTKRSSM----NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHH 94
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
M+ G + SY V+ L RF A +VG+M+ P V+ LI+G C
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
V D ++ KM + GF P + ++ I+
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTII 181
>sp|Q8GW57|PP134_ARATH Pentatricopeptide repeat-containing protein At1g80150,
mitochondrial OS=Arabidopsis thaliana GN=At1g80150 PE=2
SV=2
Length = 397
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 36 PSASHQDSDHHAYKLNHKDWLSPTE--VLKIFSNLRDPISVISVLNQYSKRKDYNPNEAL 93
PS++ + + + N L P E L + RDP + ++ + + N
Sbjct: 14 PSSAATGIAYVSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFA 73
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
+ +++LA A R D IED+++ K R +GF +I +YG AG +A++T F+
Sbjct: 74 FEDTVSRLAGAGRLDFIEDLLEHQKTLPQGR-REGFIVRIIMLYGK-AGMTKQALDTFFN 131
Query: 154 MPSYNCWPSVKTFNLVLNLL-VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
M Y C SVK+FN L +L + L+ + ++ + +K G++IDA NI +K CE G
Sbjct: 132 MDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELG 191
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
L+ A+ + E K P+V TY+TL+ L + GL M +G + TFN
Sbjct: 192 ILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFN 251
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV-GRMIC 331
+ I L + + + LL M P+S +Y V+ G RFP+ E V M
Sbjct: 252 VRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFF-LARFPDMAERVYTAMHG 310
Query: 332 ERMSPSFVSYKKLIHGLC 349
+ P+ Y+ +IH LC
Sbjct: 311 KGYKPNLKIYQTMIHYLC 328
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 152/332 (45%), Gaps = 26/332 (7%)
Query: 72 ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 131
I +VL Q + K P+ Y ++++ L + + I+ +K +C D Y
Sbjct: 343 IEAETVLKQMTD-KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC--PDAVTY 399
Query: 132 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 191
+ G++ A L +M NC P+ T N++L+ L E + + +
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 192 LGVEIDACCLNILLKGLCENGNLEAAFYVL-----------------------DEFPKQN 228
G +D NI++ GLC +G L+ A ++ D + N
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
C P++ TYSTL++GLC+ G EA L M E + D+V +NI I KQGK+
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
++L+ M+ KGC+ + +Y ++ GL K + E L+ M + +SP+ +Y I L
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYL 639
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
C + VED +L +M+Q+ P + ++ ++
Sbjct: 640 CEGEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 23/250 (9%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+ +A L M PS+ ++N++++ L + + + I + GV DA
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
LL G C G ++AA +L E + NC PN T + L+H L + G + EA LL +M
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG----------------------- 298
+G DTVT NI++ GL G++++ +++++ M+ G
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
C P+ +Y +L GL RF EAK L M+ E++ P V+Y IH C Q +
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 359 WVLKKMVQQG 368
VLK M ++G
Sbjct: 580 RVLKDMEKKG 589
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 103/201 (51%), Gaps = 4/201 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PSV +NL+L + + + +Y G+ N+L++ LC++ ++AA +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
DE P++ C+PN T+ L+ G C+ G ++ LL MES G+ + V +N ++S +
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM----SP 336
+G+ ++ K++E+M+ +G P+ ++ + L + + +A + M + P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 337 SFVSYKKLIHGLCNQKLVEDV 357
+ ++Y ++ G C L+ED
Sbjct: 290 NSITYNLMLKGFCKVGLLEDA 310
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 37/273 (13%)
Query: 134 IKIYGNMA-GRISKAIETLFD--MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
++++G+ A G + + L D + NC P + T++ +LN L A + E + ++
Sbjct: 492 MRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMM 551
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
++ D+ NI + C+ G + +AF VL + K+ C ++ TY++L+ GL K +
Sbjct: 552 GEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIF 611
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY---- 306
E GL++ M+ +GI + T+N I L + KVE+ LL+ M K PN S+
Sbjct: 612 EIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Query: 307 ------------QEV-------------LYG-----LLDKKRFPEAKELVGRMICERMSP 336
QEV LY LL + +A EL+ ++
Sbjct: 672 EAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
YK L+ LC + +E +L KM+ +G+
Sbjct: 732 GTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 22/307 (7%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC--------RFS----DGFFYNVIKI 136
PN+ +Y I++ + R D E ++++++ E L R S +G + +I
Sbjct: 215 PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ +M ++ +P P+ T+NL+L L + + ++ S +
Sbjct: 275 FSDME------LDEYLGLPR----PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
NI L+GL +G A VL + + P++ +Y+ LM GLC+ G + +A ++
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
M+ G+ D VT+ L+ G GKV+ LL+ M C PN+ + +L+ L
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
R EA+EL+ +M + V+ ++ GLC ++ ++K M G +
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 377 REIVGCV 383
+G V
Sbjct: 505 NSYIGLV 511
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 37/325 (11%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
L D +++ ++ KR P+ Y +++ + DA + ++Q + + C +
Sbjct: 377 LSDAKTIVGLM----KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM-MRNNC-LPN 430
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA----KLYGEIQ 183
+ N++ GRIS+A E L M T N++++ L + K ++
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 184 G--IYTSAA--KLGVE---------IDACCL------NILLKGLCENGNLEAAFYVLDEF 224
G ++ SAA LG I+ CL + LL GLC+ G A + E
Sbjct: 491 GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ +P+ Y+ +H C++G + AF +L+ ME +G T+N LI GL + ++
Sbjct: 551 MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
E L++ MK KG PN +Y + L + ++ +A L+ M+ + ++P+ S+K L
Sbjct: 611 FEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYL 670
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGF 369
I C V D D M Q+ F
Sbjct: 671 IEAFCK---VPDFD-----MAQEVF 687
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 121/248 (48%), Gaps = 15/248 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ ++N L +A RF +++ + EKL D YN+ + G+IS A
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL--QPDSVAYNIFIHHFCKQGKISSAF 579
Query: 149 ETLFDMPSYNCWPSVKTFN-LVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
L DM C S++T+N L+L L + +++ EI G+ + G+ + C N ++
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIF-EIHGLMDEMKEKGISPNICTYNTAIQY 638
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES-----E 262
LCE +E A +LDE ++N PNV ++ L+ C+ + + A + E S E
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKE 698
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ ++++ + L G++ + +LLE + +G + Y++++ L K A
Sbjct: 699 GL------YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVA 752
Query: 323 KELVGRMI 330
++ +MI
Sbjct: 753 SGILHKMI 760
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%)
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N+LL+ + +E ++ + P T++ L+ LC+ V+ A L + M
Sbjct: 116 NLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPE 175
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+G + TF IL+ G K G ++G++LL M+ G PN Y ++ + R +
Sbjct: 176 KGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDD 235
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++++V +M E + P V++ I LC + V D + M
Sbjct: 236 SEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 15/240 (6%)
Query: 140 MAGRISKAIETLFDMPSYNCWP-SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
+A RI K I F PS S+ + +LV AK++ EIQ ++ L I
Sbjct: 18 LAWRIFKRI---FSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLI--LSSSIQK 72
Query: 199 CCLNILLKGL---CENGNLEAAF----YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 251
L+ LL + ++ +++ AF V FP+ +P+V Y+ L+ ++ VE
Sbjct: 73 TKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPEN--KPSVYLYNLLLESCIKERRVEF 130
Query: 252 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
L + M GI T TFN+LI L V+ +L + M KGC PN ++ ++
Sbjct: 131 VSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVR 190
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
G + EL+ M + P+ V Y ++ C + +D + +++KM ++G VP
Sbjct: 191 GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVP 250
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 127/281 (45%), Gaps = 2/281 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ YT +IN + D + + D YN I A + KA+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGI--LPDVVTYNSIIAALCKAQAMDKAM 251
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E L M P T+N +L+ S+ E G GVE D ++L+ L
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+NG A + D K+ +P + TY TL+ G KG + E GLL+ M GI D
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
F+ILI KQGKV++ M + +M+ +G PN+ +Y V+ L R +A +
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
MI E +SP + Y LIHGLC E + ++ +M+ +G
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 138/321 (42%), Gaps = 5/321 (1%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+K + + +T ++ L KR DI+ R E C + F YN++ R
Sbjct: 115 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGC-IPNVFSYNILLKGLCDENR 173
Query: 144 ISKAIETLFDMP---SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+A+E L M P V ++ V+N + Y G+ D
Sbjct: 174 SQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVT 233
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N ++ LC+ ++ A VL+ K P+ TY++++HG C G +EA G L++M
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+G++ D VT+++L+ L K G+ E K+ + M +G P +Y +L G K
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
E L+ M+ + P + LI Q V+ V KM QQG P + ++
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 381 GCVT-FGKDNRNRVYVTETVD 400
G + G+ +Y + +D
Sbjct: 414 GILCKSGRVEDAMLYFEQMID 434
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 129/273 (47%), Gaps = 2/273 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +P+ +++++I A+ + D + +++ + L + Y + +GR
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL--NPNAVTYGAVIGILCKSGR 421
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ M P +N +++ L + + + + G+ ++ N
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ C+ G + + + + + +PNV TY+TL++G C G ++EA LL M S G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ +TVT++ LI+G K ++E+ + L + M+ G P+ +Y +L GL +R AK
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
EL R+ +Y ++HGLC KL +D
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 147/326 (45%), Gaps = 17/326 (5%)
Query: 70 DPISVISVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKRFDAIEDIM 114
D +S +V+N + K D + P+ Y II L +A+ D +++
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 115 QRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
+ + D YN I +G+ +AI L M S P V T++L+++ L
Sbjct: 255 NTMVKNGV--MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLC 312
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E + I+ S K G++ + LL+G G L +LD + P+
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHY 372
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
+S L+ ++G V++A + +M +G++ + VT+ +I L K G+VE+ M E+M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+G P + Y +++GL ++ A+EL+ M+ + + + + +I C + V
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIV 380
+ + + + MV+ G P + + ++
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLI 518
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 113/280 (40%), Gaps = 35/280 (12%)
Query: 127 DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIY 186
D Y+++ Y GR +A + M P + T+ +L + E+ G+
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ G+ D +IL+ + G ++ A V + +Q PN TY ++ LC+
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGL---------------------------- 278
G VE+A E+M EG+ + +N LI GL
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 479
Query: 279 -------RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
K+G+V E KL E M G PN +Y ++ G + EA +L+ M+
Sbjct: 480 NSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS 539
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ P+ V+Y LI+G C +ED + K+M G P
Sbjct: 540 VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 139/335 (41%), Gaps = 41/335 (12%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG-FFYNVIKIYG-NM 140
+++ NPN Y +I L ++ R +ED M + S G YN + I+G
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGR---VEDAMLYFEQMIDEGLSPGNIVYNSL-IHGLCT 453
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
+ +A E + +M + FN +++ E + ++ ++GV+ +
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVIT 513
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L+ G C G ++ A +L +PN TYSTL++G C+ +E+A L + ME
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEME 573
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK--- 317
S G+ D +T+NI++ GL + + +L R+ G ++Y +L+GL K
Sbjct: 574 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 633
Query: 318 --------------------------------RFPEAKELVGRMICERMSPSFVSYKKLI 345
R EAK+L + P++ +Y+ +
Sbjct: 634 DALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 693
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ Q L+E++D + M G GM IV
Sbjct: 694 ENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 2/239 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R PN Y +IN A + D ++ + L + + + +I Y ++ R
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL-KPNTVTYSTLINGYCKIS-R 561
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ A+ +M S P + T+N++L L + + +Y + G +I+ NI
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+L GLC+N + A + + + RT++ ++ L + G +EA L S G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+ + T+ ++ + QG +EE +L M+ GC +S ++ LL + A
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN +Y II+ L ++K+ D D++ R++ + + D YN + +GR S
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI--GPDVVTYNSLISGLCSSGRWSD 239
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A + M +P V TFN +++ V E + Y + ++ D ++L+
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC L+ A + + C P+V TYS L++G C+ VE L M G+
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+TVT+ ILI G + GK+ ++ RM G +PN +Y +L+GL D + +A ++
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M M V+Y +I G+C V D + + QG +P
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T N++LN KLG E LL G C + A Y+ D+
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+PNV Y+T++ GLC+ V+ A LL RME +GI D VT+N LISGL G+
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ +++ M + YP+ ++ ++ + + R EA+E MI + P V+Y L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVP 371
I+GLC +++ + + MV +G P
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFP 324
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 137/286 (47%), Gaps = 10/286 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKV----EKLCRFSDGFFYNVIKIYGNMAGRI 144
P+ A ++ +++ +++ K++D + + +++++ LC N++ ++
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC------NILLNCFCRCSQL 132
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
S A+ L M PS+ TF +LN + ++ +G + + N +
Sbjct: 133 SLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI 192
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ GLC++ ++ A +L+ K P+V TY++L+ GLC G +A ++ M I
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D TFN LI K+G+V E + E M + P+ +Y ++YGL R EA+E
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ G M+ + P V+Y LI+G C K VE + +M Q+G V
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 123/249 (49%), Gaps = 5/249 (2%)
Query: 82 SKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYG-NM 140
+KR+ Y P+ + +I+ + R E+ + + L D Y+++ IYG M
Sbjct: 248 TKREIY-PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL--DPDIVTYSLL-IYGLCM 303
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
R+ +A E M S C+P V T+++++N +K ++ ++ GV +
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
IL++G C G L A + PN+ TY+ L+HGLC+ G +E+A +L M+
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+DAD VT+NI+I G+ K G+V + + + +G P+ +Y ++ GL K
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483
Query: 321 EAKELVGRM 329
EA L +M
Sbjct: 484 EADALFRKM 492
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R+ A+ M P+V +N +++ L +K + K G+ D N
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC +G A ++ K+ P+V T++ L+ ++G V EA E M
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
+D D VT+++LI GL +++E ++ M KGC+P+ +Y ++ G K+
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
+L M + + V+Y LI G C + + + ++MV G P +
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 2/219 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R+ +P+ Y+L+I L R D E+ M V K C F D Y+++ + +
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEE-MFGFMVSKGC-FPDVVTYSILINGYCKSKK 341
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ ++ +M + T+ +++ A + I+ GV + N+
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC+NG +E A +L + K + ++ TY+ ++ G+C+ G V +A+ + + +G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
+ D T+ ++ GL K+G E L +MK G PN
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%)
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKL 290
P++ +S L+ + + + L E+M+ GI + T NIL++ + ++ +
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCN 350
L +M G P+ ++ +L G R +A + +M+ P+ V Y +I GLC
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 351 QKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
K V++ +L +M + G P + + ++
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 148/292 (50%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +++ +A+ K+FD + + + K+++L + + YN++ +IS A+
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGE--KMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M PS+ T + +LN K + + ++G D L+ GL
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ A ++D ++ C+PN+ TY +++GLC++G+++ AF LL +ME+ I+AD
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V FN +I L K V++ + L + M+ KG PN +Y ++ L R+ +A +L+
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI ++++P+ V++ LI + + + + M+++ P + + ++
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 126/274 (45%), Gaps = 35/274 (12%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR S A + L DM P++ TFN +++ V + E + ++ K ++ D
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C + L+ A + + ++C P++ TY+TL+ G C+ VE+ L M
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ DTVT+ LI GL G + K+ ++M G P+ +Y +L GL + + +
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 322 AKELVGRM------------------ICER-----------------MSPSFVSYKKLIH 346
A E+ M +C+ + P+ V+Y +I
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
GLC+++L+++ +LKKM + G +P G + ++
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 113/228 (49%), Gaps = 1/228 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
PS+ FN +L+ + K + + + +LG+ + NIL+ C + A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L + K EP++ T S+L++G C + +A L+++M G DT+TF LI GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
K E + L++RM +GC PN +Y V+ GL + A L+ +M ++ V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV-TFGK 387
+ +I LC + V+D + K+M +G P + + ++ C+ ++G+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSD 127
R IS+ L + Y P+ + ++N KR DA+ + Q +++
Sbjct: 58 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM-------- 109
Query: 128 GFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
G+ + I + G + S+A+ + M C P++ T+ +V+N L G+I
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR---GDI 166
Query: 183 QGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTL 239
+ K+ +E D N ++ LC+ +++ A + E + PNV TYS+L
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 240 MHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGC 299
+ LC G +A LL M + I+ + VTFN LI K+GK E KL + M +
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 300 YPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDW 359
P+ +Y ++ G R +AK++ M+ + P +Y LI G C K VED
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 360 VLKKMVQQGFV 370
+ ++M +G V
Sbjct: 347 LFREMSHRGLV 357
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 8/266 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRF---DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K NPN + +I+ + +F + + D M + ++ D F YN + M
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID-----PDIFTYNSLINGFCMH 303
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ KA + M S +C+P + T+N ++ +K + ++ + G+ D
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L++GL +G+ + A V + P++ TYS L+ GLC G +E+A + + M+
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
I D + +I G+ K GKV++G L + KG PN +Y ++ GL K+ E
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 322 AKELVGRMICERMSPSFVSYKKLIHG 347
A L+ +M + P +Y LI
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 116/238 (48%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RIS A+ + M P TF +++ L E + + G + +
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+++ GLC+ G+++ AF +L++ E +V ++T++ LC+ +V++A L + ME++
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI + VT++ LIS L G+ + +LL M K PN ++ ++ + + +F EA
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++L MI + P +Y LI+G C ++ + + MV + P + + ++
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 136/282 (48%), Gaps = 6/282 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++N L + D +++ +++ K+ +D +N I + A+
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI--EADVVIFNTIIDSLCKYRHVDDAL 205
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M + P+V T++ +++ L S + + + + + + + N L+
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G A + D+ K++ +P++ TY++L++G C +++A + E M S+ D
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
T+N LI G K +VE+G +L M +G ++ +Y ++ GL A+++ +
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 329 MICERMSPSFVSYKKLIHGLCN----QKLVEDVDWVLKKMVQ 366
M+ + + P ++Y L+ GLCN +K +E D++ K ++
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ +T +I+ L + ++ R+ V++ C+ + Y V+ G I
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQ-PNLVTYGVVVNGLCKRGDIDL 168
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M + V FN +++ L + + ++ G+ + + L+
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC G A +L + ++ PN+ T++ L+ ++G EA L + M ID
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T+N LI+G ++++ ++ E M K C+P+ +Y ++ G KR + EL
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + V+Y LI GL + ++ V K+MV G P
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 63/145 (43%), Gaps = 1/145 (0%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ KA+E M + + ++ + A + ++ S + GV+ +
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ GLC L+ A+ +L + + P+ TY+TL+ G+ + L+ M S
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Query: 262 EGIDADTVTFNILISGLRKQGKVEE 286
D T L++ + G++++
Sbjct: 529 CRFVGDASTIG-LVANMLHDGRLDK 552
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 150/318 (47%), Gaps = 33/318 (10%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
+ ++I KLA + D+++ ++Q++K++ S+ F +VI +Y G +A+E +
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGF-HCSEDLFISVISVY-RQVGLAERAVEMFYR 136
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+ + C PSVK +N VL+ L+ I +Y + G E + N+LLK LC+N
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE---------------------- 251
++ A +L E + C P+ +Y+T++ +CE G V+E
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256
Query: 252 --------AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
AF L+ M +GI + ++++ LI+ L G++E L +M +GC+PN
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMI-CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+ ++ G + +A +L +MI + P+ V+Y L+ G C+ + V
Sbjct: 317 YTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376
Query: 363 KMVQQGFVPRMGMWREIV 380
M + G P + + ++
Sbjct: 377 HMEEIGCSPNIRTYGSLI 394
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 9/258 (3%)
Query: 134 IKIYGNMA------GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
I+ YG++ G + A+ M + C P+V + ++ L + E + +
Sbjct: 387 IRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE 446
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN-CEPNVRTYSTLMHGLCEK 246
+K N +KGLC+ G L+ A V + +Q+ C PN+ TY+ L+ GL +
Sbjct: 447 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKA 506
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+EEA+GL + G++ + T+N L+ G G ++L+ +M G P+ +
Sbjct: 507 NRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICER--MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
++ + + A +++ + C R P +SY +I GLC ED +L++M
Sbjct: 567 NMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERM 626
Query: 365 VQQGFVPRMGMWREIVGC 382
+ G VP + W ++ C
Sbjct: 627 ISAGIVPSIATWSVLINC 644
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 144/352 (40%), Gaps = 49/352 (13%)
Query: 62 LKIFSNLRDP------ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+KI++++ D I +I ++ + KR + PN Y +++ L + + D + ++
Sbjct: 146 VKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLV 205
Query: 116 RIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVS 175
+ + C D Y + G + + E + P V +N ++N L
Sbjct: 206 EMSNKGCC--PDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNALINGLCK 258
Query: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235
Y + + G+ + + L+ LC +G +E AF L + K+ C PN+ T
Sbjct: 259 EHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYT 318
Query: 236 ------------------------------------YSTLMHGLCEKGNVEEAFGLLERM 259
Y+TL+ G C GN+ +A + M
Sbjct: 319 LSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM 378
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E G + T+ LI+G K+G ++ + + +M GC PN Y ++ L +F
Sbjct: 379 EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF 438
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA+ L+ M E +PS ++ I GLC+ ++ + V ++M QQ P
Sbjct: 439 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%)
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T+ ++ L G V+ LL++M+ +G F +IS R+ G E +++ R+
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
K GC P+ Y VL LL + R + M + P+ +Y L+ LC V
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 355 EDVDWVLKKMVQQGFVP 371
+ +L +M +G P
Sbjct: 198 DGAKKLLVEMSNKGCCP 214
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 145/292 (49%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +++ +A+ K+FD + + + K+++L + YN++ +IS A+
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGE--KMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M PS+ T + +LN K + + ++G D L+ GL
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ A ++D ++ C+PN+ TY +++GLC++G+ + A LL +ME+ I+AD
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V FN +I L K V++ + L + M+ KG PN +Y ++ L R+ +A +L+
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI ++++P+ V++ LI + + + + M+++ P + + +V
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 35/274 (12%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR S A + L DM P++ TFN +++ V + E + +Y K ++ D
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N L+ G C + L+ A + + ++C P+V TY+TL+ G C+ VE+ L M
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ DTVT+ LI GL G + K+ ++M G P+ +Y +L GL + + +
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 488
Query: 322 AKELVGRM------------------ICER-----------------MSPSFVSYKKLIH 346
A E+ M +C+ + P+ V+Y +I
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Query: 347 GLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
GLC+++L+++ +LKKM + G +P G + ++
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 136/308 (44%), Gaps = 14/308 (4%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF-DAIEDIMQRIKVEKLCRFSD 127
R IS+ L + Y P+ + ++N KR DA+ + Q +++
Sbjct: 133 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM-------- 184
Query: 128 GFFYNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
G+ + I + G + S+A+ + M C P++ T+ +V+N L
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
+ +E D N ++ LC+ +++ A + E + PNV TYS+L+
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
LC G +A LL M + I+ + VTFN LI K+GK E KL + M + P+
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
+Y ++ G R +AK++ M+ + P V+Y LI G C K VED + +
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 363 KMVQQGFV 370
+M +G V
Sbjct: 425 EMSHRGLV 432
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 1/246 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ AI M PS+ FN +L+ + K + + + +L + N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C + A +L + K EP++ T S+L++G C + +A L+++M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G DT+TF LI GL K E + L++RM +GC PN +Y V+ GL + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ V + +I LC + V+D + K+M +G P + + ++ C
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 383 V-TFGK 387
+ ++G+
Sbjct: 305 LCSYGR 310
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 8/266 (3%)
Query: 85 KDYNPNEALYTLIINKLAQAKRF---DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA 141
K NPN + +I+ + +F + + D M + ++ D F YN + M
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID-----PDIFTYNSLVNGFCMH 378
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
R+ KA + M S +C+P V T+N ++ +K + ++ + G+ D
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
L++GL +G+ + A V + P++ TYS L+ GLC G +E+A + + M+
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
I D + +I G+ K GKV++G L + KG PN +Y ++ GL K+ E
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 322 AKELVGRMICERMSPSFVSYKKLIHG 347
A L+ +M + P+ +Y LI
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 137/282 (48%), Gaps = 6/282 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +++N L + D +++ +++ K+ +D +N I + A+
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI--EADVVIFNTIIDSLCKYRHVDDAL 280
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+M + P+V T++ +++ L S + + + + + + + N L+
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ G A + D+ K++ +P++ TY++L++G C +++A + E M S+ D
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+N LI G K +VE+G +L M +G ++ +Y ++ GL A+++ +
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 329 MICERMSPSFVSYKKLIHGLCN----QKLVEDVDWVLKKMVQ 366
M+ + + P ++Y L+ GLCN +K +E D++ K ++
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 123/285 (43%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ +T +I+ L + ++ R+ V++ C+ + Y V+ G
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQ-PNLVTYGVVVNGLCKRGDTDL 243
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ L M + V FN +++ L + + ++ G+ + + L+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC G A +L + ++ PN+ T++ L+ ++G EA L + M ID
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T+N L++G ++++ ++ E M K C+P+ +Y ++ G KR + EL
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + V+Y LI GL + ++ V K+MV G P
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 1/178 (0%)
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL GL + L+ A + K P++ ++ L+ + + + L E+M+
Sbjct: 56 ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
I T+NILI+ ++ ++ + LL +M G P+ + +L G KR +A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
LV +M+ P +++ LIHGL + ++ +MVQ+G P + + +V
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 39/87 (44%)
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
G+ S Y+E+L L + +A L G M+ R PS V + KL+ + K +
Sbjct: 43 GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIVGC 382
V + +KM + V + + ++ C
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINC 129
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 134/281 (47%), Gaps = 2/281 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ +T ++ A +R++ + Q++++ + D + + ++ R+S A+
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH--DLYSFTILIHCFCRCSRLSFAL 126
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M PS+ TF +L+ G+ + K G E + N L+ GL
Sbjct: 127 SVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGL 186
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C+NG L A +L+E K+ +V TY+TL+ GLC G +A +L M I+ D
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VTF LI KQG ++E +L + M PN+ +Y ++ GL R +AK+
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
M + P+ V+Y LI G C ++V++ + ++M +GF
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 137/325 (42%), Gaps = 37/325 (11%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
+ Y PN +Y +I+ L + + +++ ++EK +D YN + +GR
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLN--EMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
S A L DM + P V TF ++++ V E Q +Y + V+ + N
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM----------------------- 240
++ GLC +G L A D + C PNV TY+TL+
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 241 ------------HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288
HG C+ G + A + M S + D +T IL+ GL G++E +
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 289 KLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGL 348
+ M+ Y +Y +++GL + +A EL R+ E + P +Y +I GL
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 349 CNQKLVEDVDWVLKKMVQQGFVPRM 373
C + D ++++M ++G + +M
Sbjct: 467 CKNGPRREADELIRRMKEEGIICQM 491
Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%)
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
KLG E LL G C + AF ++ K EPNV Y+TL+ GLC+ G +
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A LL ME +G+ AD VT+N L++GL G+ + ++L M + P+ ++ ++
Sbjct: 194 IALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
+ + EA+EL MI + P+ V+Y +I+GLC + D M +G
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 371 PRMGMWREIV 380
P + + ++
Sbjct: 314 PNVVTYNTLI 323
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 5/263 (1%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R A F+M PS+ F +L + + Y + G+ D
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C L A VL + K EP++ T+ +L+HG C + +AF L+ M
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G + + V +N LI GL K G++ ++LL M+ KG + +Y +L GL R+ +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
++ M+ ++P V++ LI Q +++ + K+M+Q P + I+
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN- 289
Query: 383 VTFGKDNRNRVY-VTETVDSLAS 404
G R+Y +T D +AS
Sbjct: 290 ---GLCMHGRLYDAKKTFDLMAS 309
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 18/315 (5%)
Query: 48 YKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRF 107
Y ++H D S T ++ F +SVL + K Y P+ + +++ R
Sbjct: 100 YGISH-DLYSFTILIHCFCRCSRLSFALSVLGKMMKL-GYEPSIVTFGSLLHGFCLVNRI 157
Query: 108 -DAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------GRISKAIETLFDMPSYNCW 160
DA ++ +K G+ NV+ +Y + G ++ A+E L +M
Sbjct: 158 GDAFSLVILMVK--------SGYEPNVV-VYNTLIDGLCKNGELNIALELLNEMEKKGLG 208
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
V T+N +L L + + + + K + D L+ + GNL+ A +
Sbjct: 209 ADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
E + + +PN TY+++++GLC G + +A + M S+G + VT+N LISG K
Sbjct: 269 YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
V+EGMKL +RM +G + +Y +++G + A ++ M+ R++P ++
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Query: 341 YKKLIHGLCNQKLVE 355
+ L+HGLC +E
Sbjct: 389 HCILLHGLCVNGEIE 403
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%)
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L G + E AF + E P++ ++ L+ E ++ME G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I D +F ILI + ++ + +L +M G P+ ++ +L+G R +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
LV M+ P+ V Y LI GLC + +L +M ++G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL 207
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 60/142 (42%)
Query: 239 LMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
L G E+AF L M V F L++ + E + ++M+ G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVD 358
+ S+ +++ R A ++G+M+ PS V++ L+HG C + D
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 359 WVLKKMVQQGFVPRMGMWREIV 380
++ MV+ G+ P + ++ ++
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLI 183
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 8/285 (2%)
Query: 92 ALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS-DGFFYNVIKIYGNMAGRISKAIET 150
A + I++ L ++KR + ++ + ++ RFS D YNVI + R KA+E
Sbjct: 162 ASFNTILDVLCKSKRVEKAYELFRALR----GRFSVDTVTYNVILNGWCLIKRTPKALEV 217
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
L +M P++ T+N +L A + K EID ++ G
Sbjct: 218 LKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGV 277
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G ++ A V DE ++ P+V TY+ ++ LC+K NVE A + E M G + + T
Sbjct: 278 AGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTT 337
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+N+LI GL G+ G +L++RM+ +GC PN +Y ++ + +A L +M
Sbjct: 338 YNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMG 397
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDV---DWVLKKMVQQGFVPR 372
P+ +Y LI G+ +K ED+ +L +MV++GF+PR
Sbjct: 398 SGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPR 442
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 7/261 (2%)
Query: 69 RDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG 128
R P + VL + +R NPN Y ++ +A + + +K ++ C
Sbjct: 210 RTP-KALEVLKEMVER-GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMK-KRDCEIDVV 266
Query: 129 FFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
+ V+ +G +AG I +A +M PSV T+N ++ +L ++
Sbjct: 267 TYTTVVHGFG-VAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEE 325
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
+ G E + N+L++GL G ++ + CEPN +TY+ ++ E
Sbjct: 326 MVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSE 385
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM---KLLERMKGKGCYPNSAS 305
VE+A GL E+M S + T+NILISG+ + + E+ + KLL M +G P +
Sbjct: 386 VEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFT 445
Query: 306 YQEVLYGLLDKKRFPEAKELV 326
+ VL GLL AKE++
Sbjct: 446 FNRVLNGLLLTGNQAFAKEIL 466
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
+ L+ RM S I TF I+ GK ++ +KL M GC+ + AS+ +L
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
L KR +A EL R + R S V+Y +++G C K VLK+MV++G P
Sbjct: 171 LCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPN 229
Query: 373 MGMWREIV 380
+ + ++
Sbjct: 230 LTTYNTML 237
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 117/241 (48%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ A+ +M +PS+ F+ +L+ + + + + LG+ + +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C L A VL + K EPN+ T S+L++G C + EA L+++M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G +TVTFN LI GL K E M L++RM KGC P+ +Y V+ GL + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ P + Y +I GLC K ++D + K+M +G P + + ++ C
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 383 V 383
+
Sbjct: 301 L 301
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 133/282 (47%), Gaps = 3/282 (1%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++LN+ + K P +Y II+ L + K D ++ + ++ + + R + + ++I
Sbjct: 241 FNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI-RPNVVTYSSLI 298
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
N GR S A L DM P V TF+ +++ V E + +Y K +
Sbjct: 299 SCLCNY-GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ + L+ G C + L+ A + + ++C P+V TY+TL+ G C+ VEE
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+ M G+ +TVT+NILI GL + G + ++ + M G PN +Y +L GL
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+ +A + + +M P+ +Y +I G+C VED
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 131/289 (45%), Gaps = 12/289 (4%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYG-NMA 141
Y PN + ++N +KR ++ ++ F G+ N + I+G +
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQM-------FVTGYQPNTVTFNTLIHGLFLH 199
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
+ S+A+ + M + C P + T+ +V+N L + + +E
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ GLC+ +++ A + E + PNV TYS+L+ LC G +A LL M
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
I+ D TF+ LI K+GK+ E KL + M + P+ +Y ++ G R E
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFV 370
AK++ M+ + P V+Y LI G C K VE+ V ++M Q+G V
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 121/238 (50%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RIS+A+ + M P+ TFN +++ L E + G + D
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+++ GLC+ G+ + AF +L++ + EP V Y+T++ GLC+ ++++A L + ME++
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
GI + VT++ LIS L G+ + +LL M + P+ ++ ++ + + + EA
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
++L M+ + PS V+Y LI+G C +++ + + MV + P + + ++
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 110/230 (47%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
M R+ +A + M S +C+P V T+N ++ K E ++ ++ G+ +
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
NIL++GL + G+ + A + E PN+ TY+TL+ GLC+ G +E+A + E +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ ++ T+NI+I G+ K GKVE+G L + KG P+ +Y ++ G K
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
EA L M + P+ Y LI E ++K+M GF
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 124/294 (42%), Gaps = 2/294 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN + +I+ L + ++ R+ V K C+ D Y V+ G
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRM-VAKGCQ-PDLVTYGVVVNGLCKRGDTDL 239
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M P V +N +++ L K + ++ G+ + + L+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC G A +L + ++ P+V T+S L+ ++G + EA L + M ID
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
VT++ LI+G +++E ++ E M K C+P+ +Y ++ G KR E E+
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + + V+Y LI GL + + K+MV G P + + ++
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------GR 143
N Y ++I L QA D ++I + + SDG N++ Y + G+
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEM-------VSDGVPPNIMT-YNTLLDGLCKNGK 481
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KA+ + P++ T+N+++ + A + ++ + + GV+ D N
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G C G+ E A + E + PN Y+TL+ G+ E + L++ M S G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 264 IDADTVTFNILISGLRKQGKVEE 286
D T L++ + G++++
Sbjct: 602 FAGDASTIG-LVTNMLHDGRLDK 623
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 152/327 (46%), Gaps = 15/327 (4%)
Query: 61 VLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
VLK+ + +L + +RK + Y++II+ L + D ++ ++++
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERK-IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 121 KLCRFSDGFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLV 174
GF ++I IY + AGR + L DM P V F+ +++ V
Sbjct: 277 -------GFKADII-IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFV 328
Query: 175 SAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVR 234
E + ++ + G+ D L+ G C+ L+ A ++LD + C PN+R
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 235 TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERM 294
T++ L++G C+ +++ L +M G+ ADTVT+N LI G + GK+E +L + M
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 295 KGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
+ P+ SY+ +L GL D +A E+ ++ +M Y +IHG+CN V
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 355 EDVDWVLKKMVQQGFVPRMGMWREIVG 381
+D + + +G P + + ++G
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ KA L M S C P+++TFN+++N A L + ++ + GV D N
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L++G CE G LE A + E + P++ +Y L+ GLC+ G E+A + E++E
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
++ D +NI+I G+ KV++ L + KG P+ +Y ++ GL K EA
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 323 KELVGRMICERMSPSFVSYKKLIHG 347
L +M + SP+ +Y LI
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRA 571
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 145/318 (45%), Gaps = 14/318 (4%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV--IK 135
L Q R P ++ + + +A+ K++D + D+ ++++++ G +N+ +
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK-------GIAHNLYTLS 111
Query: 136 IYGNMAGR---ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL 192
I N R +S A + + P TF+ ++N L E + ++
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G + LN L+ GLC NG + A ++D + +PN TY ++ +C+ G A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LL +ME I D V ++I+I GL K G ++ L M+ KG + Y ++ G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
R+ + +L+ MI +++P V++ LI + + + + + K+M+Q+G P
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 373 MGMWREIVGCVTFGKDNR 390
+ ++ F K+N+
Sbjct: 352 TVTYTSLID--GFCKENQ 367
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 117/238 (49%), Gaps = 5/238 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K PN + ++IN +A D ++ +++ + + +D YN + G++
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV--VADTVTYNTLIQGFCELGKL 438
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
A E +M S P + ++ ++L+ L + I+ K +E+D NI+
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G+C ++ A+ + P + +P+V+TY+ ++ GLC+KG++ EA L +ME +G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD---KKRF 319
+ T+NILI +G + KL+E +K G ++++ + V+ L D KK F
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616
>sp|Q9LK57|PP226_ARATH Pentatricopeptide repeat-containing protein At3g13160,
mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=1
SV=1
Length = 394
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 165/354 (46%), Gaps = 55/354 (15%)
Query: 21 SASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQ 80
S ST T +R F+ + +A+ + ++ + ++ RDP + +
Sbjct: 14 SFSTHTNRRFFSAVTAAAATPSPPKPS-------------LITLVNDERDPKFITEKFKK 60
Query: 81 YSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ-RIKVEKLCRFSDGFFYNVIKIYGN 139
+ + + N A+Y + +LA AK+F+ +E+I++ + K + + +GF +I +YG
Sbjct: 61 ACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSK--EGFVARIINLYGR 118
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ G A + +MP NC + +FN +LN V++K + ++GI+
Sbjct: 119 V-GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFK------------ 165
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFP-KQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
E P K + EP+V +Y+TL+ GLC KG+ EA L++
Sbjct: 166 -----------------------ELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
+E++G+ D +TFNIL+ +GK EEG ++ RM K + SY L GL + +
Sbjct: 203 IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENK 262
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVEDVDWVLKKMVQQGFVP 371
E L ++ + P ++ +I G ++ KL E + W K++ + G P
Sbjct: 263 SEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITW-YKEIEKNGCRP 315
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 1/233 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
+ ++N +K+FD +E I + + KL D YN + G ++A+ + +
Sbjct: 144 FNALLNACVNSKKFDLVEGIFKELP-GKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
+ + P TFN++L+ + + E + I+ + V+ D N L GL
Sbjct: 203 IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENK 262
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
E + D+ +P+V T++ ++ G +G ++EA + +E G FN
Sbjct: 263 SEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNS 322
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
L+ + K G +E +L + + K + A QEV+ L+ + EA+E+V
Sbjct: 323 LLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIV 375
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 84/207 (40%), Gaps = 2/207 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ A Y +I L F ++ I+ + L D +N++ G+ +
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLK--PDHITFNILLHESYTKGKFEEGE 232
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ M N ++++N L L E+ ++ ++ D ++KG
Sbjct: 233 QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
G L+ A E K C P +++L+ +C+ G++E A+ L + + ++ + D
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDE 352
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMK 295
++ L K K +E +++E K
Sbjct: 353 AVLQEVVDALVKGSKQDEAEEIVELAK 379
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 145/330 (43%), Gaps = 37/330 (11%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQR--------------IKVEKLCRFSDGFFYN 132
+ P+E Y ++N+L ++ D+ ++ I ++ LC+ DG F +
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK--DGSFDD 263
Query: 133 VIKIYGNMA---------------------GRISKAIETLFDMPSYNCWPSVKTFNLVLN 171
+ ++ M G+ + L +M N P V TF+ +++
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 323
Query: 172 LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP 231
+ V E + +Y G+ D N L+ G C+ L A + D + CEP
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
++ TYS L++ C+ V++ L + S+G+ +T+T+N L+ G + GK+ +L
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+ M +G P+ +Y +L GL D +A E+ +M RM+ Y +IHG+CN
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
V+D + + +G P + + ++G
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 116/232 (50%)
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ GR+S+A+ + M P + T + ++N L E + + G + D
Sbjct: 152 LEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEV 211
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+L LC++GN A + + ++N + +V YS ++ LC+ G+ ++A L M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
E +GI AD VT++ LI GL GK ++G K+L M G+ P+ ++ ++ + + +
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EAKEL MI ++P ++Y LI G C + + + + + MV +G P
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 37/269 (13%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+ Y+++IN +AKR D + + I + L + YN + + +G++
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL--IPNTITYNTLVLGFCQSGKL 436
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ A E +M S PSV T+ IL
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYG-----------------------------------IL 461
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GLC+NG L A + ++ K + Y+ ++HG+C V++A+ L + +G+
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D VT+N++I GL K+G + E L +MK GC P+ +Y ++ L + E
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE 581
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKL 353
L+ M S + K +I L +++L
Sbjct: 582 LIEEMKVCGFSADSSTIKMVIDMLSDRRL 610
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+++ AI+ M P+ FN + + + K Y + G G+E D +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I++ C L AF VL K EP+ T+STL++G C +G V EA L++RM
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
D VT + LI+GL +G+V E + L++RM G P+ +Y VL L A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+L +M + S V Y +I LC +D + +M +G + + ++G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%)
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
A KLG E D + L+ G C G + A ++D + P++ T STL++GLC KG
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
V EA L++RM G D VT+ +++ L K G + L +M+ + + Y
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
V+ L F +A L M + + V+Y LI GLCN +D +L++M+ +
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 369 FVP 371
+P
Sbjct: 311 IIP 313
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 3/221 (1%)
Query: 151 LFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
+FD M S C P + T+++++N AK + ++ + G+ + N L+ G C
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
++G L AA + E + P+V TY L+ GLC+ G + +A + E+M+ +
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG 491
Query: 270 TFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRM 329
+NI+I G+ KV++ L + KG P+ +Y ++ GL K EA L +M
Sbjct: 492 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Query: 330 ICERMSPSFVSYKKLIHG-LCNQKLVEDVDWVLKKMVQQGF 369
+ +P +Y LI L L+ V+ ++++M GF
Sbjct: 552 KEDGCTPDDFTYNILIRAHLGGSGLISSVE-LIEEMKVCGF 591
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 151/314 (48%), Gaps = 3/314 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y PN ++ +IN L R +++ R+ ++ D N + ++G+ ++
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMV--EMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ + M Y C P+ T+ VLN++ + + + +++DA +I++
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
GLC++G+L+ AF + +E + N+ TY+ L+ G C G ++ LL M I+
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
+ VTF++LI K+GK+ E +L + M +G P++ +Y ++ G + +A ++V
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTF 385
M+ + P+ ++ LI+G C ++D + +KM +G V + ++ G
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 386 GKDNRNRVYVTETV 399
GK N + E V
Sbjct: 452 GKLNVAKELFQEMV 465
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 141/288 (48%), Gaps = 2/288 (0%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y++II+ L + D ++ ++++ + ++ YN++ AGR + L D
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGIT--TNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P+V TF+++++ V E + ++ G+ D L+ G C+ +
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L+ A ++D + C+PN+RT++ L++G C+ +++ L +M G+ ADTVT+N
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
LI G + GK+ +L + M + PN +Y+ +L GL D +A E+ ++ +
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
M Y +IHG+CN V+D + + +G P + + ++G
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 112/235 (47%)
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
AI+ DM P+V F+ + + + K Y + + G+ + L+I++
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
C L AF + + K EPN T+STL++GLC +G V EA L++RM G
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D +T N L++GL GK E M L+++M GC PN+ +Y VL + + A EL+
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+M + V Y +I GLC +++ + +M +G + + ++G
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 124/271 (45%), Gaps = 3/271 (1%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+L KRK NPN ++++I+ + + E++ + + + D Y +
Sbjct: 320 LLRDMIKRK-INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA--PDTITYTSLID 376
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
+ KA + + M S C P+++TFN+++N A + ++ + GV
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
D N L++G CE G L A + E + PN+ TY L+ GLC+ G E+A +
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
E++E ++ D +NI+I G+ KV++ L + KG P +Y ++ GL K
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Query: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
EA+ L +M + +P +Y LI
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 119/238 (50%), Gaps = 5/238 (2%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K +PN + ++IN +A R D ++ +++ + + +D YN + G++
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV--VADTVTYNTLIQGFCELGKL 454
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ A E +M S P++ T+ ++L+ L + I+ K +E+D NI+
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ G+C ++ A+ + P + +P V+TY+ ++ GLC+KG + EA L +ME +G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD---KKRF 319
D T+NILI G + +KL+E +K G ++++ + V+ L D KK F
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSF 632
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 113/250 (45%), Gaps = 23/250 (9%)
Query: 145 SKAIETLFDMPS-YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA------------- 190
S+ + T+ D ++ K ++LVL L +L G +YT +
Sbjct: 82 SRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCL 141
Query: 191 ---------KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
KLG E + + L+ GLC G + A ++D + +P++ T +TL++
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GLC G EA L+++M G + VT+ +++ + K G+ M+LL +M+ +
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
++ Y ++ GL A L M + ++ + ++Y LI G CN +D +L
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 362 KKMVQQGFVP 371
+ M+++ P
Sbjct: 322 RDMIKRKINP 331
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y++II+ L + D ++ ++++ +D YN + AGR + L D
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGF--KADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M P+V TF+++++ V E + + G+ + N L+ G C+
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
LE A ++D + C+P++ T++ L++G C+ +++ L M G+ A+TVT+N
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ G + GK+E KL + M + P+ SY+ +L GL D +A E+ G++ +
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
M Y +IHG+CN V+D W L
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDA-WDL 530
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 143/301 (47%), Gaps = 16/301 (5%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRI-------KVEKLCRFSDGFFYNVIKIYGN 139
Y P+ ++ ++N L R +++ R+ + L +G N
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN------- 206
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
G++S A+ + M P+ T+ VLN++ + + + +++DA
Sbjct: 207 --GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
+I++ GLC++G+L+ AF + +E + + ++ TY+TL+ G C G ++ LL M
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
I + VTF++LI K+GK+ E +LL+ M +G PN+ +Y ++ G + R
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 320 PEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREI 379
EA ++V MI + P +++ LI+G C ++D + ++M +G + + +
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 380 V 380
V
Sbjct: 445 V 445
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 119/248 (47%), Gaps = 2/248 (0%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++S A T+ + P FN +LN L E + ++G + LN
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ GLC NG + A ++D + +PN TY +++ +C+ G A LL +ME
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
I D V ++I+I GL K G ++ L M+ KG + +Y ++ G + R+ +
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
+L+ MI ++SP+ V++ LI + + + D +LK+M+Q+G P + ++
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID- 376
Query: 383 VTFGKDNR 390
F K+NR
Sbjct: 377 -GFCKENR 383
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 1/258 (0%)
Query: 125 FSDGFFYNVIKIYGNMAG-RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
FSD K+ + G + A++ DM P+V FN + + + K Y +
Sbjct: 49 FSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVL 108
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ G+ L+I++ C L AF + + K EP+ ++TL++GL
Sbjct: 109 ALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGL 168
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
C + V EA L++RM G +T N L++GL GKV + + L++RM G PN
Sbjct: 169 CLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKK 363
+Y VL + + A EL+ +M + V Y +I GLC +++ + +
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 364 MVQQGFVPRMGMWREIVG 381
M +GF + + ++G
Sbjct: 289 MEIKGFKADIITYNTLIG 306
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 146/322 (45%), Gaps = 25/322 (7%)
Query: 77 VLNQYSKRKDYNPNEALYTLIIN------KLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
+L KRK +PN ++++I+ KL +A + ++++MQR G
Sbjct: 320 LLRDMIKRK-ISPNVVTFSVLIDSFVKEGKLREADQL--LKEMMQR-----------GIA 365
Query: 131 YNVIKIYGNMAG-----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
N I + G R+ +AI+ + M S C P + TFN+++N A + +
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 186 YTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCE 245
+ + GV + N L++G C++G LE A + E + P++ +Y L+ GLC+
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 246 KGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
G +E+A + ++E ++ D + I+I G+ KV++ L + KG ++ +
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 306 YQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMV 365
Y ++ L K +A L +M E +P ++Y LI ++++M
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 366 QQGFVPRMGMWREIVGCVTFGK 387
GF + + ++ ++ G+
Sbjct: 606 SSGFPADVSTVKMVINMLSSGE 627
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 132/260 (50%), Gaps = 2/260 (0%)
Query: 122 LCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL-YG 180
LC + F V+K Y ++ I KA+ + ++ P V ++N VL+ + +K
Sbjct: 129 LCYSTSSVFDLVVKSYSRLS-LIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNIS 187
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ ++ + V + NIL++G C GN++ A + D+ + C PNV TY+TL+
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
G C+ +++ F LL M +G++ + +++N++I+GL ++G+++E +L M +G
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
+ +Y ++ G + F +A + M+ ++PS ++Y LIH +C +
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 361 LKKMVQQGFVPRMGMWREIV 380
L +M +G P + +V
Sbjct: 368 LDQMRVRGLCPNERTYTTLV 387
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 136/293 (46%), Gaps = 2/293 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y ++I A D + +++ K C + + +I Y + +I
Sbjct: 202 SPNVFTYNILIRGFCFAGNIDVALTLFDKMET-KGCLPNVVTYNTLIDGYCKLR-KIDDG 259
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M P++ ++N+V+N L E+ + T + G +D N L+KG
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
C+ GN A + E + P+V TY++L+H +C+ GN+ A L++M G+ +
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+ L+ G ++G + E ++L M G P+ +Y ++ G + +A ++
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + +SP VSY ++ G C V++ V ++MV++G P + ++
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 33/311 (10%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLC-------RFSDGFFYNVIKI 136
R P+ YT +I+ + +A + + + +++V LC DGF
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF------- 390
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVE 195
+ G +++A L +M PSV T+N ++N V+ K+ I + + G+
Sbjct: 391 --SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI-AVLEDMKEKGLS 447
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL 255
D + +L G C + +++ A V E ++ +P+ TYS+L+ G CE+ +EA L
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 256 LERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLD 315
E M G+ D T+ LI+ +G +E+ ++L M KG P+ +Y ++ GL
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 316 KKRFPEAKELVGRMICERMSPSFVSYKKLIH---------------GLCNQKLVEDVDWV 360
+ R EAK L+ ++ E PS V+Y LI G C + ++ + D V
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 361 LKKMVQQGFVP 371
+ M+ + P
Sbjct: 628 FESMLGKNHKP 638
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 142/309 (45%), Gaps = 6/309 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGR 143
K PN Y ++IN L + R + ++ + D YN +IK Y G
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL--DEVTYNTLIKGYCK-EGN 325
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+A+ +M + PSV T+ +++ + A G+ +
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ G + G + A+ VL E P+V TY+ L++G C G +E+A +LE M+ +G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ D V+++ ++SG + V+E +++ M KG P++ +Y ++ G +++R EA
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383
+L M+ + P +Y LI+ C + +E + +MV++G +P + + ++
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN-- 563
Query: 384 TFGKDNRNR 392
K +R R
Sbjct: 564 GLNKQSRTR 572
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 24/251 (9%)
Query: 54 DWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDI 113
D +S + VL F D + V + + K P+ Y+ +I + +R D+
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVE-KGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 114 MQRIKVEKLCRFS---DGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
E++ R D F Y + M G + KA++ +M P V T+++++
Sbjct: 508 Y-----EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 171 NLLVSAKLYGE-----IQGIYTSAAKLGVEIDAC---CLNI-------LLKGLCENGNLE 215
N L E ++ Y + V C NI L+KG C G +
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A V + +N +P+ Y+ ++HG C G++ +A+ L + M G TVT L+
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Query: 276 SGLRKQGKVEE 286
L K+GKV E
Sbjct: 683 KALHKEGKVNE 693
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 134/378 (35%), Gaps = 107/378 (28%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGN-MAGR 143
PNE YT +++ +Q + +++ + +GF +V+ I G+ + G+
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMN-------DNGFSPSVVTYNALINGHCVTGK 430
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE---------------------- 181
+ AI L DM P V +++ VL+ + E
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 182 -IQG------------IYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228
IQG +Y ++G+ D L+ C G+LE A + +E ++
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 229 CEPNVRTYSTLMHGL--------------------------------------------- 243
P+V TYS L++GL
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 244 -----CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
C KG + EA + E M + D +NI+I G + G + + L + M G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 299 CYPNSASYQEVLYGLLDKKRFPEAKELVGRMI--CERMSPSFVSYKKLI---HGLCNQKL 353
++ + ++ L + + E ++ ++ CE K L+ H N +
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE--QAKVLVEINHREGNMDV 728
Query: 354 VEDVDWVLKKMVQQGFVP 371
V D VL +M + GF+P
Sbjct: 729 VLD---VLAEMAKDGFLP 743
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 126/251 (50%), Gaps = 1/251 (0%)
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+LC + + +I++Y G I ++E M Y PSV T N +L +V +
Sbjct: 117 RLCNSNPSVYDILIRVYLR-EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV 175
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
+ K + D NIL+ LC G+ E + Y++ + K P + TY+T++
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
H C+KG + A LL+ M+S+G+DAD T+N+LI L + ++ +G LL M+ + +
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
PN +Y ++ G ++ + A +L+ M+ +SP+ V++ LI G ++ ++ +
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 361 LKKMVQQGFVP 371
M +G P
Sbjct: 356 FYMMEAKGLTP 366
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 134/311 (43%), Gaps = 38/311 (12%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
+ +SV S L + KRK P+ A + ++IN L F+ +MQ K+EK
Sbjct: 173 EDVSVWSFLKEMLKRK-ICPDVATFNILINVLCAEGSFEKSSYLMQ--KMEKSGYAPTIV 229
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
YN + + GR AIE L M S
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSK-------------------------------- 257
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
GV+ D C N+L+ LC + + + +L + K+ PN TY+TL++G +G V
Sbjct: 258 ---GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
A LL M S G+ + VTFN LI G +G +E +K+ M+ KG P+ SY +
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
L GL F A+ RM + ++Y +I GLC +++ +L +M + G
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 434
Query: 370 VPRMGMWREIV 380
P + + ++
Sbjct: 435 DPDIVTYSALI 445
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 135/300 (45%), Gaps = 15/300 (5%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM--AGRIS 145
N N ++Y ++I R I+D ++ ++ L F+ Y I G++ +G
Sbjct: 120 NSNPSVYDILIRVYL---REGMIQDSLEIFRLMGLYGFNPSV-YTCNAILGSVVKSGEDV 175
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
L +M P V TFN+++N+L + + + + K G N +L
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
C+ G +AA +LD + + +V TY+ L+H LC + + + LL M I
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
+ VT+N LI+G +GKV +LL M G PN ++ ++ G + + F EA ++
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTF 385
M + ++PS VSY L+ GLC + + +GF RM VG +T+
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFD---------LARGFYMRMKRNGVCVGRITY 406
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 16/300 (5%)
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
S L Q ++ Y P Y +++ + RF A +++ +K + + +D YN++
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV--DADVCTYNMLI 270
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQGIYTS 188
+ RI+K L DM P+ T+N ++N +L++++L E+
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM------ 324
Query: 189 AAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G+ + N L+ G GN + A + + P+ +Y L+ GLC+
Sbjct: 325 -LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 383
Query: 249 VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQE 308
+ A G RM+ G+ +T+ +I GL K G ++E + LL M G P+ +Y
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443
Query: 309 VLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQG 368
++ G RF AKE+V R+ +SP+ + Y LI+ C +++ + + M+ +G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 146/363 (40%), Gaps = 58/363 (15%)
Query: 42 DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKL 101
D+D Y + D + K + LRD +++ +PNE Y +IN
Sbjct: 260 DADVCTYNMLIHDLCRSNRIAKGYLLLRD-----------MRKRMIHPNEVTYNTLINGF 308
Query: 102 AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK-----AIETLFDMPS 156
+ + ++ + S G N + + G IS+ A++ + M +
Sbjct: 309 SNEGKVLIASQLLNEM-------LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Query: 157 YNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEA 216
PS ++ ++L+ L + +G Y + GV + ++ GLC+NG L+
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421
Query: 217 AFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN---------------------------- 248
A +L+E K +P++ TYS L++G C+ G
Sbjct: 422 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 481
Query: 249 -------VEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
++EA + E M EG D TFN+L++ L K GKV E + + M G P
Sbjct: 482 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 541
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
N+ S+ ++ G + +A + M P+F +Y L+ GLC + + + L
Sbjct: 542 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 601
Query: 362 KKM 364
K +
Sbjct: 602 KSL 604
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 134/294 (45%), Gaps = 2/294 (0%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L + K K + + Y ++I+ L ++ R A ++ R +++ ++ + +I +
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRI-AKGYLLLRDMRKRMIHPNEVTYNTLINGF 308
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEID 197
N G++ A + L +M S+ P+ TFN +++ +S + E ++ G+
Sbjct: 309 SN-EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 367
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
+LL GLC+N + A + TY+ ++ GLC+ G ++EA LL
Sbjct: 368 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 427
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
M +GID D VT++ LI+G K G+ + +++ R+ G PN Y ++Y
Sbjct: 428 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
EA + MI E + ++ L+ LC V + + ++ M G +P
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 541
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 134/339 (39%), Gaps = 51/339 (15%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI------YGNMAGRISKA 147
+ +++ L +A + E+ M+ C SDG N + YGN +G KA
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMR-------CMTSDGILPNTVSFDCLINGYGN-SGEGLKA 562
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M P+ T+ +L L E + S + +D N LL
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 622
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV---------EEAFG---- 254
+C++GNL A + E +++ P+ TY++L+ GLC KG EA G
Sbjct: 623 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 682
Query: 255 -----------------------LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
E+M++ G D VT N +I G + GK+E+ LL
Sbjct: 683 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 742
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
M + PN +Y +L+G +K + L +I + P ++ L+ G+C
Sbjct: 743 PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 802
Query: 352 KLVEDVDWVLKKMVQQGF-VPRMGMWREIVGCVTFGKDN 389
++E +LK + +G V R I C G+ N
Sbjct: 803 NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 841
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 14/280 (5%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
+ +LN+ SK +P+ Y+ +IN + RF ++I+ RI L +G Y+ +
Sbjct: 423 VVLLNEMSK-DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS--PNGIIYSTL 479
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G + +AI M TFN+++ L A E + G+
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ + L+ G +G AF V DE K P TY +L+ GLC+ G++ EA
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
L+ + + DTV +N L++ + K G + + + L M + P+S +Y ++ GL
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 659
Query: 315 DKKR------FPEAKELVGRMICERMSPSFVSYKKLIHGL 348
K + F + E G ++ P+ V Y + G+
Sbjct: 660 RKGKTVIAILFAKEAEARGNVL-----PNKVMYTCFVDGM 694
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 123/287 (42%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K P+E Y ++++ L + FD R+K +C + + + N G +
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN--GFL 419
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+A+ L +M P + T++ ++N + + I ++G+ + + L
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
+ C G L+ A + + + + T++ L+ LC+ G V EA + M S+GI
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+TV+F+ LI+G G+ + + + M G +P +Y +L GL EA++
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + + V Y L+ +C + + +MVQ+ +P
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 142/321 (44%), Gaps = 53/321 (16%)
Query: 77 VLNQYSKRKDYNPNEALY-TLIINKLAQAKR------FDAIEDIMQRIKVEKLCRF---- 125
+L+ YSKRKD + + LY ++I+N + K E M I ++ L F
Sbjct: 760 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 819
Query: 126 --SDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ 183
D + +N++ G I+ A + + M S T + ++++L + E +
Sbjct: 820 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 879
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN-CEPNVR-------- 234
+ +K G+ ++ L+ GLC G+++ AF V +E C PNV
Sbjct: 880 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939
Query: 235 --------------------------TYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+++TLMH C+ GNV EA L M + G+ D
Sbjct: 940 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR-FPEA----K 323
V++N+LI+GL +G + +L E MKG G N+ +Y+ ++ GLL ++ F A K
Sbjct: 1000 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
Query: 324 ELVGRMICERMSPSFVSYKKL 344
+L+ R MS S S++ L
Sbjct: 1060 DLLARGFITSMSLSQDSHRNL 1080
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 154/385 (40%), Gaps = 76/385 (19%)
Query: 69 RDPISVISVL--NQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFS 126
R +VI++L + R + PN+ +YT ++ + +A ++ A I R +++ L
Sbjct: 660 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA--GIYFREQMDNLGHTP 717
Query: 127 DGFFYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL----------------- 168
D N +I Y M G+I K + L +M + N P++ T+N+
Sbjct: 718 DIVTTNAMIDGYSRM-GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 169 ----VLNLLVSAKL--YGEIQGIYTS-----AAKL-------GVEIDACCLNILLKGLCE 210
+LN ++ KL + + GI S K+ GVE+D N+L+ C
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836
Query: 211 NGNLEAAF-----------------------------------YVLDEFPKQNCEPNVRT 235
NG + AF VL E KQ P R
Sbjct: 837 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 896
Query: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
Y L++GLC G+++ AF + E M + I V + ++ L K GK +E LL M
Sbjct: 897 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 956
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
P AS+ +++ EA EL M + VSY LI GLC + +
Sbjct: 957 KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1016
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIV 380
+ ++M GF+ ++ ++
Sbjct: 1017 LAFELYEEMKGDGFLANATTYKALI 1041
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/298 (17%), Positives = 114/298 (38%), Gaps = 7/298 (2%)
Query: 65 FSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCR 124
+ N + + SV ++ +K ++P Y ++ L + E ++ +
Sbjct: 553 YGNSGEGLKAFSVFDEMTK-VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA- 610
Query: 125 FSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTF-NLVLNLLVSAKLYGEIQ 183
D YN + +G ++KA+ +M + P T+ +L+ L K I
Sbjct: 611 -VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669
Query: 184 GIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGL 243
+ A+ V + + G+ + G +A Y ++ P++ T + ++ G
Sbjct: 670 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 729
Query: 244 CEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNS 303
G +E+ LL M ++ + T+NIL+ G K+ V L + G P+
Sbjct: 730 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 789
Query: 304 ASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ ++ G+ + +++ IC + ++ LI C +++W
Sbjct: 790 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG---EINWAF 844
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 154/323 (47%), Gaps = 9/323 (2%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQ 115
+S T VL+ ++ P + + S K ++ E + L++ L +A+ + + +
Sbjct: 66 ISRTTVLQTLRLIKVPADGLRFFDWVSN-KGFSHKEQSFFLMLEFLGRARNLNVARNFLF 124
Query: 116 RI--KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLL 173
I + + D +F ++I+ YGN AG ++++ M PSV TFN +L++L
Sbjct: 125 SIERRSNGCVKLQDRYFNSLIRSYGN-AGLFQESVKLFQTMKQMGISPSVLTFNSLLSIL 183
Query: 174 VSAKLYGEIQGIYTSAAKL-GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
+ G ++ + GV D+ N L+ G C+N ++ AF + + +C P+
Sbjct: 184 LKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPD 243
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA--DTVTFNILISGLRKQGKVEEGMKL 290
V TY+T++ GLC G V+ A +L M + D + V++ L+ G + +++E + +
Sbjct: 244 VVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLV 303
Query: 291 LERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV--GRMICERMSPSFVSYKKLIHGL 348
M +G PN+ +Y ++ GL + R+ E K+++ G +P ++ LI
Sbjct: 304 FHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAH 363
Query: 349 CNQKLVEDVDWVLKKMVQQGFVP 371
C+ ++ V ++M+ P
Sbjct: 364 CDAGHLDAAMKVFQEMLNMKLHP 386
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N L++ G + + + + P+V T+++L+ L ++G A L + M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 261 -SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ G+ D+ TFN LI+G K V+E ++ + M+ C P+ +Y ++ GL +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 320 PEAKELVGRMI--CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWR 377
A ++ M+ + P+ VSY L+ G C ++ +++ V M+ +G P +
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 378 EIV 380
++
Sbjct: 321 TLI 323
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 131/300 (43%), Gaps = 11/300 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +I L++A R+D I+DI+ D +N++ AG + A+
Sbjct: 314 PNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAM 373
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI--DAC-----CL 201
+ +M + P ++++++ L + + ++ + V + D C
Sbjct: 374 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 433
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N + + LC NG + A V + K+ + + +Y TL+ G C +G + A+ LL M
Sbjct: 434 NPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLR 492
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
D T+ +LI GL K G+ L+RM P + ++ VL L +K E
Sbjct: 493 REFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANE 552
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
+ LV M+ +R+ + +++ L + E +++ + G++ +M E++G
Sbjct: 553 SFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKM---EELLG 609
>sp|Q8L6Y7|PP193_ARATH Pentatricopeptide repeat-containing protein At2g38420,
mitochondrial OS=Arabidopsis thaliana GN=At2g38420 PE=2
SV=2
Length = 453
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 146/307 (47%), Gaps = 12/307 (3%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P Y +I LA++ + + I ++ ++V + + F +VI YG +GRI +AI
Sbjct: 70 PTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYG-FSGRIEEAI 128
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE-IQGIYTSAAKLGVEIDACCLNILLKG 207
E F +P++ C PS T N +L +LV + E + I A ++GV ++ IL+
Sbjct: 129 EVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDA 188
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE--EAFGLLERME----S 261
LC G ++ A ++ + + + R YS L+ +C+ + + G LE + S
Sbjct: 189 LCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFS 248
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
G+ TV L+ G G+ +E + +L +MK P+ Y VL G++ + +P+
Sbjct: 249 PGLRDYTVVMRFLVEG----GRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPK 304
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
A +L ++ ++P +Y I+GLC Q +E ++ M + G P + + ++
Sbjct: 305 ADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIK 364
Query: 382 CVTFGKD 388
+ D
Sbjct: 365 ALVKAGD 371
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 116/239 (48%), Gaps = 2/239 (0%)
Query: 93 LYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF-YNVIKIYGNMAGRISKAIETL 151
LY+ +++ + + K D++ ++ + RFS G Y V+ + GR + + L
Sbjct: 216 LYSRLLSSVCKHKDSSCF-DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVL 274
Query: 152 FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCEN 211
M P + + +VL +++ + Y + ++ LG+ D N+ + GLC+
Sbjct: 275 NQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQ 334
Query: 212 GNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTF 271
++E A ++ K EPNV TY+ L+ L + G++ A L + ME+ G++ ++ TF
Sbjct: 335 NDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTF 394
Query: 272 NILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+I+IS + +V LLE + S+ +EV+ L +K +A EL+ ++
Sbjct: 395 DIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-SEGIDA 266
L ++ N +L F NCEP + Y ++ L + +E +L +E SE D
Sbjct: 47 LTDSENASVMRTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDT 106
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
F +I+ G++EE +++ ++ C P++ + +L L+ K+ ++ ELV
Sbjct: 107 PESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKR---QSLELV 163
Query: 327 GRMICE--RMSPSF--VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
++ + RM ++ LI LC V+ +++ M Q + ++ ++
Sbjct: 164 PEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSS 223
Query: 383 VTFGKDN 389
V KD+
Sbjct: 224 VCKHKDS 230
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 13/284 (4%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIK-----VEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
+ L+I+ L++ D ++ +K V+ C F +I Y M G KA+
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYC------FCVLISAYAKM-GMAEKAV 147
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQ-GIYTSAAKLGVEIDACCLNILLKG 207
E+ M ++C P V T+N++L +++ +++ + +Y K + IL+ G
Sbjct: 148 ESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDG 207
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
L + G A + D+ + PN TY+ L+ GLC++G+ ++A L M++ G D
Sbjct: 208 LYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPD 267
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+V N L+ G K G++ E +LL + G Y ++ GL +R+ +A EL
Sbjct: 268 SVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M+ + + P + Y LI GL +ED +L M +G P
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISP 371
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
GR S A + DM P+ T+ ++++ L + + ++ G D+
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAH 271
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N LL G C+ G + AF +L F K +R YS+L+ GL +AF L M
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ I D + + ILI GL K GK+E+ +KLL M KG P++ Y V+ L + E
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ L M P ++ LI +C LV + + + ++ + G P + + ++
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 146/343 (42%), Gaps = 44/343 (12%)
Query: 51 NHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAI 110
N+ D ++ +L F L + +L + K + Y+ +I+ L +A+R+
Sbjct: 264 NYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK-DGFVLGLRGYSSLIDGLFRARRYTQA 322
Query: 111 EDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL 170
++ + + + D Y ++ + AG+I A++ L MPS P +N V+
Sbjct: 323 FELYANMLKKNIK--PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVI 380
Query: 171 NLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCE 230
L L E + + ++ DAC IL+ +C NG + A + E K C
Sbjct: 381 KALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCS 440
Query: 231 PNVRTYSTLMHGLCEKGNVEEAFGLLERME------------------------------ 260
P+V T++ L+ GLC+ G ++EA LL +ME
Sbjct: 441 PSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILK 500
Query: 261 ---------SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 311
G D V++N+LI+G + G ++ +KLL ++ KG P+S +Y ++
Sbjct: 501 AYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLIN 560
Query: 312 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLV 354
GL R EA +L R SP+ Y+ L+ C ++ V
Sbjct: 561 GLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSCRKRKV 601
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 116/253 (45%), Gaps = 4/253 (1%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN YT++I+ L Q D + ++ + D +N + GR+ +A
Sbjct: 230 SPNRVTYTILISGLCQRGSADDARKLFYEMQTSG--NYPDSVAHNALLDGFCKLGRMVEA 287
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
E L ++ ++ +++ L A+ Y + +Y + K ++ D IL++G
Sbjct: 288 FELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQG 347
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGL-LERMESEGIDA 266
L + G +E A +L P + P+ Y+ ++ LC +G +EE L LE E+E
Sbjct: 348 LSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF-P 406
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T ILI + + G V E ++ ++ GC P+ A++ ++ GL EA+ L+
Sbjct: 407 DACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466
Query: 327 GRMICERMSPSFV 339
+M R + F+
Sbjct: 467 HKMEVGRPASLFL 479
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 144/399 (36%), Gaps = 112/399 (28%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK-----------------VEKLC--- 123
+K+ P+ LYT++I L++A + IED ++ + ++ LC
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGK---IEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Query: 124 ----------------RFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFN 167
F D + ++ G + +A E ++ C PSV TFN
Sbjct: 388 LLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFN 447
Query: 168 LVLNLLVS-------------------AKLY-----------------GEIQGIYTSAAK 191
+++ L A L+ G I Y A
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAH 507
Query: 192 L---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGN 248
G D N+L+ G C G+++ A +L+ + P+ TY+TL++GL G
Sbjct: 508 FADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGR 567
Query: 249 VEEAFGLL----ERMESEGIDADTVT-----------FNILISGLRK------------- 280
EEAF L + S + +T FN+ + L+K
Sbjct: 568 EEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIE 627
Query: 281 ----QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSP 336
+G+ E ++ L + + Y L GL RF EA + + +++
Sbjct: 628 QCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILV 687
Query: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF--VPRM 373
+ S KLIHGLC ++ ++ V + F +PR+
Sbjct: 688 TPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRV 726
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 148/292 (50%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + +++ +A+ K+FD + + + K+++L + + YN++ +IS A+
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGE--KMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M PS+ T + +LN K + + ++G D L+ GL
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ A ++D ++ C+PN+ TY +++GLC++G+++ AF LL +ME+ I+A+
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V ++ +I L K ++ + L M+ KG PN +Y ++ L + +R+ +A L+
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI +++P+ V++ LI + + + + + +M+++ P + + ++
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 113/241 (46%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ AI M PS+ FN +L+ + K + + + +LG+ + N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C + A +L + K EP++ T S+L++G C + +A L+++M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G DT+TF LI GL K E + L++RM +GC PN +Y V+ GL + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ + V Y +I LC + +D + +M +G P + + ++ C
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 383 V 383
+
Sbjct: 305 L 305
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
R S A L DM P+V TFN +++ V E + +Y K ++ D +
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C + L+ A ++ + ++C PNV TY+TL++G C+ ++E L M
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G+ +TVT+ LI G + + + ++M G +PN +Y +L GL + +A
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
+ + +M P+ +Y +I G+C VED
Sbjct: 490 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 35/263 (13%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
RIS A+ + M P TF +++ L E + + G + +
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+++ GLC+ G+++ AF +L++ E NV YST++ LC+ + ++A L ME++
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 263 G-----------------------------------IDADTVTFNILISGLRKQGKVEEG 287
G I+ + VTFN LI K+GK+ E
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
KL + M + P+ +Y ++ G R EAK + MI + P+ V+Y LI+G
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 348 LCNQKLVEDVDWVLKKMVQQGFV 370
C K +++ + ++M Q+G V
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLV 432
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 2/222 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ +P+ Y+ +IN R D + + + + + K C F + YN + A R
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE-LMISKDC-FPNVVTYNTLINGFCKAKR 415
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I + +E +M + T+ +++ A+ Q ++ GV + N
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC+NG LE A V + + EP + TY+ ++ G+C+ G VE+ + L + +G
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSAS 305
+ D + +N +ISG ++G EE L +M+ G P+S +
Sbjct: 536 VKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 2/294 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ +T +I+ L + ++ R+ V++ C+ + Y V+ G I
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQ-PNLVTYGVVVNGLCKRGDIDL 243
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A L M + +V ++ V++ L + + ++T GV + + L+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC A +L + ++ PNV T++ L+ ++G + EA L + M ID
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T++ LI+G +++E + E M K C+PN +Y ++ G KR E EL
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M + + V+Y LIHG + ++ V K+MV G P + + ++
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 129/314 (41%), Gaps = 49/314 (15%)
Query: 73 SVISVLNQYSKRKD------------YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVE 120
S+IS L Y + D NPN + +I+ + + E + +
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 121 KLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYG 180
+ D F Y+ + M R+ +A M S +C+P+V T+N ++N AK
Sbjct: 360 SI--DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 181 EIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLM 240
E ++ ++ G+ + L+ G + + + A V + PN+ TY+TL+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 241 HGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCY 300
GLC+ G +E+A + E ++ ++ T+NI+I G+ K GKVE+G L + KG
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 301 PNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWV 360
P+ + Y +I G C + L E+ D +
Sbjct: 538 PD-----------------------------------VIIYNTMISGFCRKGLKEEADAL 562
Query: 361 LKKMVQQGFVPRMG 374
+KM + G +P G
Sbjct: 563 FRKMREDGPLPDSG 576
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 38/87 (43%)
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
G+ S Y+E+L L + +A L G M+ R PS + KL+ + K +
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIVGC 382
V + +KM + G + + ++ C
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINC 129
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 162/348 (46%), Gaps = 23/348 (6%)
Query: 56 LSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPN----EALYTLIIN----------KL 101
+SP+ V +FS DP + ++ + S+ Y + +L TL+IN +L
Sbjct: 88 ISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRL 147
Query: 102 AQAKRFDAIEDIMQRI----KVEKLCRFSDGF-----FYNVIKIYGNMAGRISKAIETLF 152
K D++ D + + K+ K RF + YN + G + + +
Sbjct: 148 LMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 153 DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENG 212
+M P++ T+N ++N E + + G++ D L+ G C+
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 213 NLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFN 272
+L++AF V +E P + C N Y+ L+HGLC ++EA L +M+ + T+
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 273 ILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICE 332
+LI L + E + L++ M+ G PN +Y ++ L + +F +A+EL+G+M+ +
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 333 RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
+ P+ ++Y LI+G C + ++ED V++ M + P + E++
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 140/289 (48%), Gaps = 15/289 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMA------G 142
PN YT++I+ L +F+ +++ ++ +EK G NVI Y + G
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQM-LEK------GLMPNVI-TYNALINGYCKRG 407
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
I A++ + M S P+ +T+N ++ + ++ + G+ + V D N
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYN 466
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
L+ G C +GN ++A+ +L + P+ TY++++ LC+ VEEA L + +E +
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G++ + V + LI G K GKV+E +LE+M K C PNS ++ +++GL + EA
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
L +M+ + P+ + LIH L + ++M+ G P
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 145/313 (46%), Gaps = 21/313 (6%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P++ YT +I+ L ++KR + D+ ++ +K + + +I Y AG++ +A
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLE-QKGVNPNVVMYTALIDGYCK-AGKVDEAH 552
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M S NC P+ TFN +++ L + E + K+G++ IL+ L
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
++G+ + A+ + +P+ TY+T + C +G + +A ++ +M G+ D
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK----------- 317
T++ LI G G+ +L+RM+ GC P+ ++ ++ LL+ K
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 318 -------RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ-QGF 369
F EL+ +M+ ++P+ SY+KLI G+C + + V M + +G
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792
Query: 370 VPRMGMWREIVGC 382
P ++ ++ C
Sbjct: 793 SPSELVFNALLSC 805
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 3/292 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN Y +IN + + D+++ ++ KL + YN + I G + KA+
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLS--PNTRTYNEL-IKGYCKSNVHKAM 447
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M P V T+N +++ + + + + G+ D ++ L
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C++ +E A + D ++ PNV Y+ L+ G C+ G V+EA +LE+M S+ ++
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
+TFN LI GL GK++E L E+M G P ++ +++ LL F A +
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ P +Y I C + + D + ++ KM + G P + + ++
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 136/313 (43%), Gaps = 7/313 (2%)
Query: 68 LRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSD 127
+ D + V+ ++ + + +PN Y +I ++ A+ ++ ++ K+ D
Sbjct: 409 IEDAVDVVELM----ESRKLSPNTRTYNELIKGYCKSNVHKAM-GVLNKMLERKV--LPD 461
Query: 128 GFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT 187
YN + +G A L M P T+ +++ L +K E ++
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 188 SAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
S + GV + L+ G C+ G ++ A +L++ +NC PN T++ L+HGLC G
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
++EA L E+M G+ T ILI L K G + ++M G P++ +Y
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ + R +A++++ +M +SP +Y LI G + VLK+M
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 368 GFVPRMGMWREIV 380
G P + ++
Sbjct: 702 GCEPSQHTFLSLI 714
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 57/262 (21%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
P+ YT I + R ED+M +++ + D F Y+ +IK YG++ G+ + A
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS--PDLFTYSSLIKGYGDL-GQTNFA 691
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+ L M C PS TF ++ L+ K YG+ +G E + C ++ +++
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLEMK-YGKQKG---------SEPELCAMSNMME- 740
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-SEGIDA 266
+ +L++ + + PN ++Y L+ G+CE GN+ A + + M+ +EGI
Sbjct: 741 ------FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Query: 267 DTVTFN-----------------------------------ILISGLRKQGKVEEGMKLL 291
+ FN +LI GL K+G+ E G +
Sbjct: 795 SELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVF 854
Query: 292 ERMKGKGCYPNSASYQEVLYGL 313
+ + G Y + +++ ++ G+
Sbjct: 855 QNLLQCGYYEDELAWKIIIDGV 876
>sp|Q8LE47|PPR87_ARATH Pentatricopeptide repeat-containing protein At1g61870,
mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2
SV=2
Length = 408
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 172/376 (45%), Gaps = 22/376 (5%)
Query: 16 IQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVI 75
I+SLSSASTI + +P S + S L + + +DP ++
Sbjct: 23 IRSLSSASTILSPDS---KTPLTSKEKS---------------KAALSLLKSEKDPDRIL 64
Query: 76 SVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK 135
+ S D + ++ + LA+ K F A+ +++ + S+ F + I
Sbjct: 65 EICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIV 124
Query: 136 IYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-GV 194
+Y A + ++ D+ + +VK+ N +L + AK Y E + +Y K+ G+
Sbjct: 125 LYAQ-ANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGI 183
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
E D N ++K CE+G+ +++ ++ E ++ +PN ++ ++ G + +E
Sbjct: 184 EPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGK 243
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
+L M+ G++ T+NI I L K+ K +E LL+ M G PN+ +Y +++G
Sbjct: 244 VLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFC 303
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMG 374
++ F EAK+L M+ P Y LI+ LC E + K+ +++ +VP
Sbjct: 304 NEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFS 363
Query: 375 MWREIVGCVTFGKDNR 390
+ + +V KD++
Sbjct: 364 IMKSLVN--GLAKDSK 377
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYV 220
P FN +L +V + + + + + K V +D IL+KG CE G +E +F +
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFF-NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDL 185
Query: 221 LDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
L E + PNV Y+TL+ G C+KG +E+A L M G+ A+ T+ +LI+GL K
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G ++G ++ E+M+ G +PN +Y V+ L R +A ++ M +S + V+
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
Y LI GLC + + + + V+ +M G P + + ++
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 117/231 (50%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
AG I K+ + L ++ + P+V + +++ + + ++ KLG+ +
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
+L+ GL +NG + F + ++ + PN+ TY+ +M+ LC+ G ++AF + + M
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ + VT+N LI GL ++ K+ E K++++MK G PN +Y ++ G +
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A L + +SPS V+Y L+ G C + ++K+M ++G P
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 126/259 (48%), Gaps = 7/259 (2%)
Query: 128 GFFYNVIKIYGNM------AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGE 181
GF NV+ IY + G I KA + F+M + +T+ +++N L + +
Sbjct: 193 GFSPNVV-IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQ 251
Query: 182 IQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH 241
+Y + GV + N ++ LC++G + AF V DE ++ N+ TY+TL+
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 242 GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYP 301
GLC + + EA ++++M+S+GI+ + +T+N LI G GK+ + + L +K +G P
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 302 NSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
+ +Y ++ G K A ++V M + PS V+Y LI +E +
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 362 KKMVQQGFVPRMGMWREIV 380
M + G VP + + ++
Sbjct: 432 LSMEELGLVPDVHTYSVLI 450
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 128/295 (43%), Gaps = 10/295 (3%)
Query: 90 NEALYTLIINKL----AQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRIS 145
NE YT++IN L + + F+ E MQ V F + + YN + GR
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEK-MQEDGV-----FPNLYTYNCVMNQLCKDGRTK 285
Query: 146 KAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILL 205
A + +M ++ T+N ++ L E + G+ + N L+
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 206 KGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGID 265
G C G L A + + + P++ TY+ L+ G C KG+ A +++ ME GI
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 266 ADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKEL 325
VT+ ILI + +E+ ++L M+ G P+ +Y +++G K + EA L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 326 VGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
M+ + P+ V Y +I G C + +LK+M ++ P + +R ++
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 134/293 (45%), Gaps = 22/293 (7%)
Query: 89 PNEALYTLIINKLAQAKR----FDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-- 142
PN Y ++N+L + R F +++ +R G N++ Y + G
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER-----------GVSCNIV-TYNTLIGGL 313
Query: 143 ----RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDA 198
++++A + + M S P++ T+N +++ G+ + G+
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 199 CCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
NIL+ G C G+ A ++ E ++ +P+ TY+ L+ N+E+A L
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
ME G+ D T+++LI G +G++ E +L + M K C PN Y ++ G +
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A +L+ M + ++P+ SY+ +I LC ++ ++ + +++KM+ G P
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNM------AGR 143
N Y +I L + + + ++ ++K SDG N+I Y + G+
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMK-------SDGINPNLI-TYNTLIDGFCGVGK 353
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-------GVEI 196
+ KA+ D+ S PS+ T+N++++ +G + AAK+ G++
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCR-------KGDTSGAAKMVKEMEERGIKP 406
Query: 197 DACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLL 256
IL+ + N+E A + + P+V TYS L+HG C KG + EA L
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466
Query: 257 ERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDK 316
+ M + + + V +N +I G K+G +KLL+ M+ K PN ASY+ ++ L +
Sbjct: 467 KSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKE 526
Query: 317 KRFPEAKELVGRMICERMSPS 337
++ EA+ LV +MI + PS
Sbjct: 527 RKSKEAERLVEKMIDSGIDPS 547
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 2/222 (0%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K NPN Y +I+ + + + +K L YN++ G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS--PSLVTYNILVSGFCRKG 387
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
S A + + +M PS T+ ++++ + + + S +LG+ D +
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
+L+ G C G + A + ++NCEPN Y+T++ G C++G+ A LL+ ME +
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ + ++ +I L K+ K +E +L+E+M G P+++
Sbjct: 508 ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%)
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ KAI+ M P V T++++++ E ++ S + E + N
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G C+ G+ A +L E ++ PNV +Y ++ LC++ +EA L+E+M G
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Query: 264 IDADTVTFNIL 274
ID T +++
Sbjct: 544 IDPSTSILSLI 554
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 143/295 (48%), Gaps = 12/295 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI-----KIYG 138
R+ PN + ++IN L + + + D+M+ +KV + YN + K+ G
Sbjct: 216 RRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCS--PNVVSYNTLIDGYCKLGG 273
Query: 139 NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEID 197
N G++ KA L +M + P++ TFN++++ L G ++ ++ V+ +
Sbjct: 274 N--GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMK-VFKEMLDQDVKPN 330
Query: 198 ACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLE 257
N L+ GLC G + A + D+ +PN+ TY+ L++G C+ ++EA +
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 258 RMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKK 317
++ +G T +N+LI K GK+++G L E M+ +G P+ +Y ++ GL
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 318 RFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
AK+L ++ + + P V++ L+ G C + +LK+M + G PR
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 117/232 (50%), Gaps = 2/232 (0%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G+IS+AI M S P++ T+N ++N + E ++ S G
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
N+L+ C+ G ++ F + +E ++ P+V TY+ L+ GLC GN+E A L +++
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
S+G+ D VTF+IL+ G ++G+ + LL+ M G P +Y V+ G +
Sbjct: 464 SKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Query: 321 EAKELVGRMICE-RMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A + +M E R+ + SY L+ G + +ED + +L +M+++G VP
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 3/224 (1%)
Query: 161 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE---NGNLEAA 217
P+V TFN+V+N L + + + G + N L+ G C+ NG + A
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 218 FYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 277
VL E + + PN+ T++ L+ G + N+ + + + M + + + +++N LI+G
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340
Query: 278 LRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPS 337
L GK+ E + + ++M G PN +Y ++ G EA ++ G + + P+
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400
Query: 338 FVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVG 381
Y LI C ++D + ++M ++G VP +G + ++
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 155/374 (41%), Gaps = 40/374 (10%)
Query: 20 SSASTITRKRTFALASPSASHQD--------SDHHAYKLN-HKDWLSPTEVLK-IFSNLR 69
SS+STIT SP D H KL H ++P E+ + + S+
Sbjct: 27 SSSSTIT-------GSPCPPRYDVAVIADLIEKQHWSKLGVHVTDINPNELFRQLISSEL 79
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
DP + + K D + + L +++ LA AKR+ I F DGF
Sbjct: 80 DPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRS------------FLDGF 127
Query: 130 FYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
N + +I M C S+ LVL +++ + + +
Sbjct: 128 VRN-------GSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEA-FKRS 179
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
G ++ A L+ L + YV E ++ +PNV T++ +++ LC+ G +
Sbjct: 180 GYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKM 239
Query: 250 EEAFGLLERMESEGIDADTVTFNILISG---LRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+A ++E M+ G + V++N LI G L GK+ + +L+ M PN ++
Sbjct: 240 NKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTF 299
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ G P + ++ M+ + + P+ +SY LI+GLCN + + + KMV
Sbjct: 300 NILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVS 359
Query: 367 QGFVPRMGMWREIV 380
G P + + ++
Sbjct: 360 AGVQPNLITYNALI 373
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 6/235 (2%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMAGRISKA 147
PN Y +IN + D+ +K + + YN +I Y + G+I
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR--MYNMLIDAYCKL-GKIDDG 420
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
+M P V T+N ++ L + ++ G+ D +IL++G
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEG 479
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG-IDA 266
C G A +L E K +P TY+ +M G C++GN++ A + +ME E +
Sbjct: 480 YCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRM 539
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ ++N+L+ G ++GK+E+ LL M KG PN +Y+ V ++D+ P+
Sbjct: 540 NVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 16/186 (8%)
Query: 78 LNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIY 137
L + +R+ P+ Y +I L + +A + + ++ + L D ++++
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL---PDLVTFHILMEG 479
Query: 138 GNMAGRISKAIETLFDMPSYNCWPSVKTFNLVL-------NLLVSAKLYGEIQGIYTSAA 190
G KA L +M P T+N+V+ NL + + +++
Sbjct: 480 YCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQME------K 533
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
+ + ++ N+LL+G + G LE A +L+E ++ PN TY + + ++G V
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVP 593
Query: 251 EAFGLL 256
+ G L
Sbjct: 594 DIEGHL 599
>sp|Q9MAG8|PPR79_ARATH Putative pentatricopeptide repeat-containing protein At1g53330
OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1
Length = 471
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 160/326 (49%), Gaps = 13/326 (3%)
Query: 58 PTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRI 117
P+ +K+F N DP S + ++ + + Y +II KL +K FD ++ ++ +
Sbjct: 22 PSAAMKLFRN-PDPEST-------NPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHL 73
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRI-SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSA 176
K + ++ F NVI +G G++ S+A+ +MP Y C +VK+ N +L+ L+
Sbjct: 74 KTDTRIVPTEIIFCNVINFFGR--GKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKC 131
Query: 177 KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
+++ +S + G + DAC NIL+ G ++G + A + DE K+ +P T+
Sbjct: 132 GELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTF 190
Query: 237 STLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
TL+HGLC+ V+EA + M + G+ + LI L + G++ KL +
Sbjct: 191 GTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAY 250
Query: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
++A Y ++ L+ R E ++ M + P V+Y LI+G C + E
Sbjct: 251 EGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSE 310
Query: 356 DVDWVLKKMVQQGFVPRMGMWREIVG 381
+ VL +MV++G P + + I+G
Sbjct: 311 SANRVLDEMVEKGLKPDVISYNMILG 336
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 116/248 (46%), Gaps = 3/248 (1%)
Query: 127 DGFFYNVIKIYG-NMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGI 185
D YN++ I+G + +G A++ +M P+ TF +++ L E +
Sbjct: 151 DACTYNIL-IHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 186 YTSAAKL-GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLC 244
K+ GV L+K LC+ G L AF + DE + + + YSTL+ L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 245 EKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSA 304
+ G E +LE M +G DTVT+N+LI+G + E ++L+ M KG P+
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 305 SYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKM 364
SY +L K++ EA L M SP +SY+ + GLC E+ +L +M
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 365 VQQGFVPR 372
+ +G+ PR
Sbjct: 390 LFKGYKPR 397
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 145/311 (46%), Gaps = 17/311 (5%)
Query: 75 ISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD---AIEDIMQRIKVEKLCRFSDGFFY 131
+S ++++ K P+ Y ++I+ +Q+ FD + D M + KV+ G +
Sbjct: 141 LSSIDEFGK-----PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVK-----PTGVTF 190
Query: 132 NVIKIYGNMA-GRISKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSA 189
+ I+G R+ +A++ DM Y P+V + ++ L + A
Sbjct: 191 GTL-IHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEA 249
Query: 190 AKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNV 249
+ +++DA + L+ L + G +L+E ++ C+P+ TY+ L++G C + +
Sbjct: 250 YEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDS 309
Query: 250 EEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV 309
E A +L+ M +G+ D +++N+++ + K EE L E M +GC P++ SY+ V
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Query: 310 LYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
GL + +F EA ++ M+ + P + + LC +E + V+ + +G
Sbjct: 370 FDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGI 428
Query: 370 VPRMGMWREIV 380
+W ++
Sbjct: 429 AGDADVWSVMI 439
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 139/338 (41%), Gaps = 53/338 (15%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG-- 142
+++ P+ YT +I+ L +A F+ D + R++ + NV+ + G
Sbjct: 296 ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMR-------ATSCLPNVVTYSTLLCGCL 348
Query: 143 ---RISKAIETLFDMPSYNCWPSVKTFN-------------------------------L 168
++ + L M C+PS K FN +
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 169 VLNLLVSA----------KLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAF 218
V N+L+ + L + Y+ GV ++ ++ + LC G E AF
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 219 YVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 278
V+ E Q P+ TYS +++ LC +E AF L E M+ G+ AD T+ I++
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 279 RKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSF 338
K G +E+ K M+ GC PN +Y +++ L K+ A EL M+ E P+
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 339 VSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
V+Y LI G C VE + ++M VP + M+
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 143/308 (46%), Gaps = 18/308 (5%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ + Y+ ++N L A + + + + +K L +D + Y ++ AG I +A
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL--VADVYTYTIMVDSFCKAGLIEQAR 538
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
+ +M C P+V T+ +++ + AK ++ + G + + L+ G
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 209 CENGNLEAAFYV------------LDEFPKQ---NCE-PNVRTYSTLMHGLCEKGNVEEA 252
C+ G +E A + +D + KQ N E PNV TY L+ G C+ VEEA
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
LL+ M EG + + + ++ LI GL K GK++E ++ M G +Y ++
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
KR A +++ +M+ +P+ V Y ++I GLC ++ +++ M ++G P
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778
Query: 373 MGMWREIV 380
+ + ++
Sbjct: 779 VVTYTAMI 786
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 140/339 (41%), Gaps = 40/339 (11%)
Query: 53 KDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIED 112
++ LS + V+++ + P +VIS ++ Y +Y +++ + + E+
Sbjct: 127 REKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEE 186
Query: 113 IMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNL 172
+Q+I+ + F G F NV+ G S A+E L + + PS T+N
Sbjct: 187 FLQQIRDDDKEVF--GEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN----- 239
Query: 173 LVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPN 232
C + LK L++A + E N +
Sbjct: 240 --------------------------CLIQAFLKA----DRLDSASLIHREMSLANLRMD 269
Query: 233 VRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLE 292
T + LC+ G EA L+E +E DTV + LISGL + EE M L
Sbjct: 270 GFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326
Query: 293 RMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQK 352
RM+ C PN +Y +L G L+KK+ K ++ M+ E PS + L+H C
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386
Query: 353 LVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRN 391
+LKKMV+ G +P ++ ++G + KD+ N
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 425
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 142/314 (45%), Gaps = 28/314 (8%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIK----IYGNM-AG 142
PN YT +I+ +AK+ ++ + + S+G N++ I G+ AG
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETM-------LSEGCLPNIVTYSALIDGHCKAG 602
Query: 143 RISKAIETLF------DMPSYNCW----------PSVKTFNLVLNLLVSAKLYGEIQGIY 186
++ KA + D+P + + P+V T+ +L+ + E + +
Sbjct: 603 QVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 662
Query: 187 TSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEK 246
+ + G E + + L+ GLC+ G L+ A V E + + TYS+L+ +
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 722
Query: 247 GNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASY 306
+ A +L +M + V + +I GL K GK +E KL++ M+ KGC PN +Y
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 782
Query: 307 QEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQ 366
++ G + EL+ RM + ++P++V+Y+ LI C ++ +L++M Q
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 367 QGFVPRMGMWREIV 380
+ +R+++
Sbjct: 843 THWPTHTAGYRKVI 856
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 129/281 (45%), Gaps = 7/281 (2%)
Query: 78 LNQYSKRKDYN---PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVI 134
++ Y K+ D N PN Y +++ ++ R + ++ + +E C + Y+ +
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG-CE-PNQIVYDAL 680
Query: 135 KIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGV 194
G++ +A E +M + ++ T++ +++ K + + +
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 195 EIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFG 254
+ ++ GLC+ G + A+ ++ ++ C+PNV TY+ ++ G G +E
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 255 LLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLL 314
LLERM S+G+ + VT+ +LI K G ++ LLE MK ++A Y++V+ G
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF- 859
Query: 315 DKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355
K F E+ L+ + + +P Y+ LI L + +E
Sbjct: 860 -NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLE 899
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 23/255 (9%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
PN +YT +I+ L + + D +MQ ++ EK C+ + + +I +G M G+I +
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMME-EKGCQPNVVTYTAMIDGFG-MIGKIETCL 799
Query: 149 ETLFDMPSYNCWPSVKTFNLVLN-------LLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
E L M S P+ T+ ++++ L V+ L E++ + G
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK----- 854
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME- 260
+++G N + +LDE + + P + Y L+ L + +E A LLE +
Sbjct: 855 --VIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 261 -SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
S + + T+N LI L KVE +L M KG P S+ ++ GL +
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970
Query: 320 PEA---KELVGRMIC 331
EA + + M+C
Sbjct: 971 SEALLLLDFISHMVC 985
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 143/297 (48%), Gaps = 12/297 (4%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNV--IKIYGNMAGRISK 146
P+ ++ + +A+ K+F+ + D +++++ +G +N+ + I N R K
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLEL-------NGIAHNIYTLNIMINCFCRCCK 138
Query: 147 ---AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
A L + P TFN ++ L E + + G + D N
Sbjct: 139 TCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS 198
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
++ G+C +G+ A +L + ++N + +V TYST++ LC G ++ A L + ME++G
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 258
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I + VT+N L+ GL K GK +G LL+ M + PN ++ +L + + + EA
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 318
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EL MI +SP+ ++Y L+ G C Q + + + +L MV+ P + + ++
Sbjct: 319 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 126/254 (49%)
Query: 118 KVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK 177
KV KL D +N + + G++S+A+ + M C P V T+N ++N + +
Sbjct: 148 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Query: 178 LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYS 237
+ + V+ D + ++ LC +G ++AA + E + + +V TY+
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 238 TLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGK 297
+L+ GLC+ G + LL+ M S I + +TFN+L+ K+GK++E +L + M +
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 298 GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDV 357
G PN +Y ++ G + R EA ++ M+ + SP V++ LI G C K V+D
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 358 DWVLKKMVQQGFVP 371
V + + ++G V
Sbjct: 388 MKVFRNISKRGLVA 401
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y+ II+ L + DA + + ++ + + S YN + AG+ + L D
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGI--KSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M S P+V TFN++L++ V E +Y G+ + N L+ G C
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L A +LD + C P++ T+++L+ G C V++ + + G+ A+ VT++I
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 274 LISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICER 333
L+ G + GK++ +L + M G P+ +Y +L GL D + +A E+ + +
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 334 MSPSFVSYKKLIHGLCNQKLVEDVDWVL 361
M V Y +I G+C VED W L
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDA-WNL 495
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%)
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
YN + M R+S+A L M C P + TF ++ K + ++ + +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
K G+ +A +IL++G C++G ++ A + E P+V TY L+ GLC+ G +E
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
+A + E ++ +D V + +I G+ K GKVE+ L + KG PN +Y ++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
GL K EA L+ +M + +P+ +Y LI
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 6/237 (2%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
R +P+ +T +I KR D + + I L ++ Y+++ +G+
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL--VANAVTYSILVQGFCQSGK 418
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
I A E +M S+ P V T+ ++L+ L + I+ K +++
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++G+C+ G +E A+ + P + +PNV TY+ ++ GLC+KG++ EA LL +ME +G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEV----LYGLLDK 316
+ T+N LI + G + KL+E MK G +++S + V L G LDK
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDK 595
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 2/266 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
+PN Y +++ R +++ + V C F ++IK Y M R+
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLD-LMVRNKCSPDIVTFTSLIKGYC-MVKRVDDG 387
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
++ ++ + T+++++ + + ++ GV D ILL G
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
LC+NG LE A + ++ K + + Y+T++ G+C+ G VE+A+ L + +G+ +
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
+T+ ++ISGL K+G + E LL +M+ G PN +Y ++ L + +L+
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 328 RMICERMSPSFVSYKKLIHGLCNQKL 353
M S S K +I L + +L
Sbjct: 568 EMKSCGFSADASSIKMVIDMLLSGEL 593
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 150/353 (42%), Gaps = 16/353 (4%)
Query: 23 STITRKRTFALASPSASHQDSD---HHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLN 79
S I R + F L + + H+ Y LN ++ F SVL
Sbjct: 96 SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI--------MINCFCRCCKTCFAYSVLG 147
Query: 80 QYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGN 139
+ K Y P+ + +I L + ++ R+ VE C+ D YN I
Sbjct: 148 KVMKL-GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM-VENGCQ-PDVVTYNSIVNGIC 204
Query: 140 MAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+G S A++ L M N V T++ +++ L ++ G++
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERM 259
N L++GLC+ G +L + + PNV T++ L+ ++G ++EA L + M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 260 ESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRF 319
+ GI + +T+N L+ G Q ++ E +L+ M C P+ ++ ++ G KR
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 320 PEAKELVGRMICER-MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ + V R I +R + + V+Y L+ G C ++ + + ++MV G +P
Sbjct: 385 DDGMK-VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 232 NVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLL 291
N+ T + +++ C A+ +L ++ G + DT TFN LI GL +GKV E + L+
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 292 ERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ 351
+RM GC P+ +Y ++ G+ A +L+ +M + +Y +I LC
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 352 KLVEDVDWVLKKMVQQGFVPRMGMWREIV-GCVTFGKDNRNRVYVTETV 399
++ + K+M +G + + +V G GK N + + + V
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 59/135 (43%)
Query: 215 EAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 274
+ A + E + P++ +S + +++E GI + T NI+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 275 ISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERM 334
I+ + K +L ++ G P++ ++ ++ GL + + EA LV RM+
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 335 SPSFVSYKKLIHGLC 349
P V+Y +++G+C
Sbjct: 190 QPDVVTYNSIVNGIC 204
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 114/241 (47%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ A+ DM +PS+ F+ +L+ + + + + LG+ + +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
IL+ C L A VL + K EP++ T ++L++G C + +A L+ +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G D+ TFN LI GL + + E + L++RM KGC P+ +Y V+ GL + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ P V Y +I LCN K V D + +M +G P + + ++ C
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 383 V 383
+
Sbjct: 301 L 301
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 2/285 (0%)
Query: 87 YNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISK 146
Y P+ + +I+ L + R ++ R+ V K C+ D Y ++ G I
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV-KGCQ-PDLVTYGIVVNGLCKRGDIDL 239
Query: 147 AIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLK 206
A+ L M P V +N +++ L + K + ++T G+ + N L++
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 207 GLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDA 266
LC G A +L + ++ PNV T+S L+ ++G + EA L + M ID
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 267 DTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELV 326
D T++ LI+G +++E + E M K C+PN +Y ++ G KR E EL
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 327 GRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
M + + V+Y LIHG + ++ V K+MV G +P
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 141/292 (48%), Gaps = 2/292 (0%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ ++ +++ +A+ +FD + + +++ + L + + Y+++ ++S A+
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQM--QNLGISHNLYTYSILINCFCRRSQLSLAL 136
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L M P + T N +LN + + ++G + D+ N L+ GL
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
+ A ++D + C+P++ TY +++GLC++G+++ A LL++ME I+
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
V +N +I L V + + L M KG PN +Y ++ L + R+ +A L+
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
MI +++P+ V++ LI + + + + + +M+++ P + + ++
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
RIS A+ + M P TFN +++ L E + G + D
Sbjct: 164 GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT 223
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
I++ GLC+ G+++ A +L + + EP V Y+T++ LC NV +A L M+
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD 283
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
++GI + VT+N LI L G+ + +LL M + PN ++ ++ + + +
Sbjct: 284 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
EA++L MI + P +Y LI+G C +++ + + M+ + P + + ++
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 136/288 (47%), Gaps = 4/288 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF-FYNVIKIYGNMAGR 143
K P+ Y +++N L + D ++++++ K+ G YN I
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI---EPGVVIYNTIIDALCNYKN 271
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
++ A+ +M + P+V T+N ++ L + + + + + + + + +
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
L+ + G L A + DE K++ +P++ TYS+L++G C ++EA + E M S+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ VT+N LI G K +V+EGM+L M +G N+ +Y +++G + A+
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 324 ELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ +M+ + + P ++Y L+ GLCN VE V + + + P
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 143/327 (43%), Gaps = 37/327 (11%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P +Y II+ L K + ++ + K R + + ++I+ N GR S A
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMD-NKGIRPNVVTYNSLIRCLCNY-GRWSDAS 311
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
L DM P+V TF+ +++ V E + +Y K ++ D + L+ G
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME-------- 260
C + L+ A ++ + ++C PNV TY+TL+ G C+ V+E L M
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 261 ---------------------------SEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
S+G+ D +T++IL+ GL GKVE + + E
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 294 MKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKL 353
++ P+ +Y ++ G+ + + +L + + + P+ V+Y ++ G C + L
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 354 VEDVDWVLKKMVQQGFVPRMGMWREIV 380
E+ D + ++M ++G +P G + ++
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 115/246 (46%), Gaps = 2/246 (0%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
++ +P+ Y+ +IN R D + + + + + K C F + YN + A R
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE-LMISKDC-FPNVVTYNTLIKGFCKAKR 411
Query: 144 ISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ + +E +M + T+ +++ A+ Q ++ GV D +I
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
LL GLC NG +E A V + + EP++ TY+ ++ G+C+ G VE+ + L + +G
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
+ + VT+ ++SG ++G EE L MK +G P+S +Y ++ L +
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Query: 324 ELVGRM 329
EL+ M
Sbjct: 592 ELIREM 597
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 2/260 (0%)
Query: 88 NPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKA 147
NPN ++ +I+ + + E + + + D F Y+ + M R+ +A
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI--DPDIFTYSSLINGFCMHDRLDEA 380
Query: 148 IETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKG 207
M S +C+P+V T+N ++ AK E ++ ++ G+ + L+ G
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Query: 208 LCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDAD 267
+ + A V + P++ TYS L+ GLC G VE A + E ++ ++ D
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Query: 268 TVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVG 327
T+NI+I G+ K GKVE+G L + KG PN +Y ++ G K EA L
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Query: 328 RMICERMSPSFVSYKKLIHG 347
M E P +Y LI
Sbjct: 561 EMKEEGPLPDSGTYNTLIRA 580
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 4/212 (1%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
KD PN Y +I +AKR D ++ + + L + Y + I+G R
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL--VGNTVTYTTL-IHGFFQARE 446
Query: 145 SKAIETLF-DMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNI 203
+ +F M S P + T++++L+ L + ++ + +E D NI
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 204 LLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEG 263
+++G+C+ G +E + + + +PNV TY+T+M G C KG EEA L M+ EG
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMK 295
D+ T+N LI + G +L+ M+
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 147/313 (46%), Gaps = 6/313 (1%)
Query: 70 DPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGF 129
+P +++LN+ K K + +Y II+ L + K D D+ +++ + + D F
Sbjct: 230 EPDLALNLLNKMEKGK-IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI--KPDVF 286
Query: 130 FYN-VIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTS 188
YN +I N GR S A L DM N P + FN +++ V E + +Y
Sbjct: 287 TYNPLISCLCNY-GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 189 AAKLG-VEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKG 247
K D N L+KG C+ +E V E ++ N TY+TL+HG +
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 248 NVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQ 307
+ + A + ++M S+G+ D +T+NIL+ GL G VE + + E M+ + + +Y
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 308 EVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
++ L + + +L + + + P+ V+Y ++ G C + L E+ D + +M +
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Query: 368 GFVPRMGMWREIV 380
G +P G + ++
Sbjct: 526 GPLPNSGTYNTLI 538
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%)
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
++ AI DM +PS+ F+ +L+ + + + + LG+ + +
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
I + C L A +L + K P++ T ++L++G C + EA L+++M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEA 322
G DTVTF L+ GL + K E + L+ERM KGC P+ +Y V+ GL + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 323 KELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGC 382
L+ +M ++ V Y +I GLC K ++D + KM +G P + + ++ C
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 383 V 383
+
Sbjct: 295 L 295
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 160/346 (46%), Gaps = 22/346 (6%)
Query: 11 HRQSIIQSLSSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRD 70
HR +++ + +T+ +R+FA AS ++ K+ +L+
Sbjct: 14 HRHTVLLKGNPRTTLCWERSFAGASSDDCRENLSR-----------------KVLQDLKL 56
Query: 71 PISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFF 130
I + K + + P+ ++ +++ +A+ +FD + + +++ + L + +
Sbjct: 57 D-DAIGLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQM--QNLGISHNLYT 112
Query: 131 YNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAA 190
Y++ Y ++S A+ L M PS+ T N +LN E +
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 191 KLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVE 250
++G + D L+ GL ++ A +++ + C+P++ TY +++GLC++G +
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 251 EAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVL 310
A LL +ME I+AD V +N +I GL K +++ L +M+ KG P+ +Y ++
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 311 YGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQ-KLVE 355
L + R+ +A L+ M+ + ++P V + LI + KLVE
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE 338
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 1/245 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K+ NP+ + +I+ + + E + + K C F D YN + R+
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC-FPDVVAYNTLIKGFCKYKRV 372
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ +E +M + T+ +++ A+ Q ++ GV D NIL
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
L GLC NGN+E A V + K++ + ++ TY+T++ LC+ G VE+ + L + +G+
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
+ VT+ ++SG ++G EE L MK G PNS +Y ++ L + E
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 325 LVGRM 329
L+ M
Sbjct: 553 LIKEM 557
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%)
Query: 165 TFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEF 224
T+++ +N I KLG LN LL G C + A ++D+
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 225 PKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKV 284
+ +P+ T++TL+HGL + EA L+ERM +G D VT+ +I+GL K+G+
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 285 EEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKL 344
+ + LL +M+ + Y ++ GL K +A +L +M + + P +Y L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 345 IHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIV 380
I LCN D +L M+++ P + + ++
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Query: 193 GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEA 252
G D C N+ K L ++ L+ A + + K P++ +S L+ + + +
Sbjct: 36 GASSDDCRENLSRKVL-QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLV 94
Query: 253 FGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYG 312
L E+M++ GI + T++I I+ ++ ++ + +L +M G P+ + +L G
Sbjct: 95 ISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNG 154
Query: 313 LLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPR 372
R EA LV +M+ P V++ L+HGL + ++++MV +G P
Sbjct: 155 FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 214
Query: 373 MGMWREIV 380
+ + ++
Sbjct: 215 LVTYGAVI 222
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 3/197 (1%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N YT +I+ QA+ D + + +++ + + D YN++ G + A+
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV--HPDIMTYNILLDGLCNNGNVETALV 447
Query: 150 TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLC 209
M + + T+ ++ L A + ++ S + GV+ + ++ G C
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 210 ENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTV 269
G E A + E + PN TY+TL+ G+ + L++ M S G D
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567
Query: 270 TFNILISGLRKQGKVEE 286
TF L++ + G++++
Sbjct: 568 TFG-LVTNMLHDGRLDK 583
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 134/286 (46%), Gaps = 4/286 (1%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYN-VIKIYGNMA 141
K P Y ++N L A D+ E + + ++ ++ D YN +IK Y A
Sbjct: 214 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRI--KPDIVTYNTMIKGYCK-A 270
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G+ KA+E L DM + T+ ++ + +G +Y + G+++
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
++++ GLC+ G L + V + ++ +PNV Y+ L+ G + G+VE+A LL RM
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
EG D VT++++++GL K G+VEE + + G NS Y ++ GL R E
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
A+ L M + + Y LI + V++ + K+M ++
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE 496
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 136/321 (42%), Gaps = 37/321 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
K+K Y N Y +++ LA AK D I + IK + + +IK +G + G
Sbjct: 144 KQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEF-PMTVSAANALIKSFGKL-G 201
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLN 202
+ + + M P++ T+N ++N LVSA + ++ ++ D N
Sbjct: 202 MVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYN 261
Query: 203 ILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMH--------------------- 241
++KG C+ G + A L + + E + TY T++
Sbjct: 262 TMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEK 321
Query: 242 --------------GLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEG 287
GLC++G + E + + E M +G + + +LI G K G VE+
Sbjct: 322 GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDA 381
Query: 288 MKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHG 347
++LL RM +G P+ +Y V+ GL R EA + + ++ + + Y LI G
Sbjct: 382 IRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDG 441
Query: 348 LCNQKLVEDVDWVLKKMVQQG 368
L V++ + + ++M ++G
Sbjct: 442 LGKAGRVDEAERLFEEMSEKG 462
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 129/302 (42%), Gaps = 49/302 (16%)
Query: 127 DGFFYN-VIKIYGNMAGRISKAIETLFDMP----SYNCWPSVK---TFNL-----VLNLL 173
DGF +IK+ N + K+ E + + P S+ CW + T NL ++++L
Sbjct: 104 DGFCRKFLIKLSPNFVSFVLKSDE-IREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVL 162
Query: 174 VSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV 233
AK I+ + + K + N L+K + G +E +V + + EP +
Sbjct: 163 ALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTL 222
Query: 234 RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLER 293
TY+ LM+GL V+ A + E MES I D VT+N +I G K G+ ++ M+ L
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD 282
Query: 294 MKGKG--------------CYPNS------ASYQE---------------VLYGLLDKKR 318
M+ +G CY +S A YQE V+ GL + +
Sbjct: 283 METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK 342
Query: 319 FPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWRE 378
E + MI + P+ Y LI G VED +L +M+ +GF P + +
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Query: 379 IV 380
+V
Sbjct: 403 VV 404
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 16/216 (7%)
Query: 90 NEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIE 149
N Y+ +I+ L +A R D E + + + EK C D + YN + ++ +AI
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMS-EKGCT-RDSYCYNALIDAFTKHRKVDEAIA 488
Query: 150 TLFDMPSY-NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
M C +V T+ ++L+ + E ++ G+ A C L GL
Sbjct: 489 LFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGL 548
Query: 209 CENGNLEAAFYVLDEFPKQN------CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESE 262
C +G + A +LDE CE + T LC+ G ++EA L + +
Sbjct: 549 CLSGKVARACKILDELAPMGVILDAACEDMINT-------LCKAGRIKEACKLADGITER 601
Query: 263 GIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKG 298
G + ++I+ LRK GK + MKL+ G G
Sbjct: 602 GREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIG 637
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 113/248 (45%), Gaps = 12/248 (4%)
Query: 84 RKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGR 143
RK PN A+YT++I+ A++ + ++ R+ E D Y+V+ GR
Sbjct: 355 RKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF--KPDVVTYSVVVNGLCKNGR 412
Query: 144 ISKAIETL----FDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDAC 199
+ +A++ FD + N ++ +++ L A E + ++ ++ G D+
Sbjct: 413 VEEALDYFHTCRFDGLAINSM----FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 200 CLNILLKGLCENGNLEAAFYVLDEFPKQ-NCEPNVRTYSTLMHGLCEKGNVEEAFGLLER 258
C N L+ ++ ++ A + ++ C+ V TY+ L+ G+ ++ EEA L +
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDM 528
Query: 259 MESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKR 318
M +GI F L +GL GKV K+L+ + G ++A ++++ L R
Sbjct: 529 MIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGR 587
Query: 319 FPEAKELV 326
EA +L
Sbjct: 588 IKEACKLA 595
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 18/291 (6%)
Query: 117 IKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETL-------FDMPSYNCWPSVKTFNLV 169
++V +C GF + + I G I AI+ FD+P C NL
Sbjct: 163 MRVTPMC----GFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCG------NL- 211
Query: 170 LNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNC 229
L+ ++ G I G Y G ++ NIL+ C+ GN+ A V DE K++
Sbjct: 212 LDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSL 271
Query: 230 EPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMK 289
+P V +++TL++G C+ GN++E F L +ME D T++ LI+ L K+ K++
Sbjct: 272 QPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHG 331
Query: 290 LLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLC 349
L + M +G PN + +++G KE +M+ + + P V Y L++G C
Sbjct: 332 LFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC 391
Query: 350 NQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVTFGKDNRNRVYVTETVD 400
+ ++ M+++G P + ++ G D + + + +D
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 3/195 (1%)
Query: 180 GEIQGIYTSAAKL---GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTY 236
GEI + S K+ G++ D N L+ G C+NG+L AA ++D ++ P+ TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 237 STLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKG 296
+TL+ G C G+VE A + + M+ GI+ D V F+ L+ G+ K+G+V + + L M
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 297 KGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVED 356
G P+ +Y ++ K +L+ M + PS V+Y L++GLC +++
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Query: 357 VDWVLKKMVQQGFVP 371
D +L M+ G VP
Sbjct: 539 ADMLLDAMLNIGVVP 553
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 1/227 (0%)
Query: 162 SVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVL 221
+V FN+++N + Q ++ K ++ N L+ G C+ GNL+ F +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 222 DEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 281
+ K P+V TYS L++ LC++ ++ A GL + M G+ + V F LI G +
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 282 GKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSY 341
G+++ + ++M KG P+ Y ++ G A+ +V MI + P ++Y
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 342 KKLIHGLCNQKLVEDVDWVLKKMVQQGF-VPRMGMWREIVGCVTFGK 387
LI G C VE + K+M Q G + R+G + G G+
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 131/305 (42%), Gaps = 6/305 (1%)
Query: 89 PNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAI 148
P+ Y+ +IN L + + D + + L +D F +I + G I
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIP-NDVIFTTLIHGHSR-NGEIDLMK 365
Query: 149 ETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGL 208
E+ M S P + +N ++N + I + G+ D L+ G
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 209 CENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADT 268
C G++E A + E + E + +S L+ G+C++G V +A L M GI D
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 269 VTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGR 328
VT+ +++ K+G + G KLL+ M+ G P+ +Y +L GL + A L+
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 329 MICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCVT-FGK 387
M+ + P ++Y L+ G + + ++K + G V + ++ IV + K
Sbjct: 546 MLNIGVVPDDITYNTLLEG--HHRHANSSKRYIQK-PEIGIVADLASYKSIVNELDRASK 602
Query: 388 DNRNR 392
D+RNR
Sbjct: 603 DHRNR 607
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 101/231 (43%)
Query: 141 AGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACC 200
G + + M P V T++ ++N L G++ K G+ +
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 201 LNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERME 260
L+ G NG ++ + + +P++ Y+TL++G C+ G++ A +++ M
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 261 SEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFP 320
G+ D +T+ LI G + G VE +++ + M G + + ++ G+ + R
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 321 EAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+A+ + M+ + P V+Y ++ C + + +LK+M G VP
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 140/326 (42%), Gaps = 38/326 (11%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAG 142
KR+++ + + Y +I L +A+ + + +Q + S ++K G A
Sbjct: 118 KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGR-AK 176
Query: 143 RISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYT--------------- 187
+SKA+ + C P+ T+N V+ +L+ + ++ +YT
Sbjct: 177 MVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITY 236
Query: 188 --------------SAAKLGVEIDACCL-------NILLKGLCENGNLEAAFYVLDEFPK 226
SA +L E+ C+ LL + G +E A + +E +
Sbjct: 237 SALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR 296
Query: 227 QNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEE 286
C P V TY+ L+ GL + G V+EA+G + M +G+ D V N L++ L K G+VEE
Sbjct: 297 AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEE 356
Query: 287 GMKLLERMKGKGCYPNSASYQEVLYGLLDKK-RFPEAKELVGRMICERMSPSFVSYKKLI 345
+ M C P SY V+ L + K E +M + +SPS +Y LI
Sbjct: 357 LTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILI 416
Query: 346 HGLCNQKLVEDVDWVLKKMVQQGFVP 371
G C VE +L++M ++GF P
Sbjct: 417 DGYCKTNRVEKALLLLEEMDEKGFPP 442
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 131/329 (39%), Gaps = 50/329 (15%)
Query: 83 KRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDG------FFYNVIKI 136
KR +P YT +I L +A R D + + DG F N++ I
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM-------LRDGLTPDVVFLNNLMNI 347
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLY-GEIQGIYTSAAKLGVE 195
G + GR+ + +M + C P+V ++N V+ L +K + E+ + V
Sbjct: 348 LGKV-GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406
Query: 196 IDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEP------------------------ 231
+IL+ G C+ +E A +L+E ++ P
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 232 ---------NV--RTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 280
NV R Y+ ++ + G + EA L M+++G D +N L+SG+ K
Sbjct: 467 FKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVK 526
Query: 281 QGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVS 340
G + E LL +M+ GC + S+ +L G A E+ + + P V+
Sbjct: 527 AGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVT 586
Query: 341 YKKLIHGLCNQKLVEDVDWVLKKMVQQGF 369
Y L+ + + E+ ++++M +GF
Sbjct: 587 YNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 11/320 (3%)
Query: 38 ASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDPIS----VISVLNQYSKRKDY--NPNE 91
A D + YK +D L+P V +NL + + V + N +S+ + P
Sbjct: 316 AGRVDEAYGFYKDMLRDGLTPDVVF--LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 92 ALYTLIINKLAQAK-RFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET 150
Y +I L ++K + ++K + + F Y+++ R+ KA+
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVS--PSEFTYSILIDGYCKTNRVEKALLL 431
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
L +M P + ++N L AK Y ++ + + + +++K +
Sbjct: 432 LEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGK 491
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G L A + +E Q P+V Y+ LM G+ + G + EA LL +ME G AD +
Sbjct: 492 CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINS 551
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
NI+++G + G +++ E +K G P+ +Y +L F EA ++ M
Sbjct: 552 HNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMK 611
Query: 331 CERMSPSFVSYKKLIHGLCN 350
+ ++Y ++ + N
Sbjct: 612 DKGFEYDAITYSSILDAVGN 631
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 154/350 (44%), Gaps = 53/350 (15%)
Query: 59 TEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIK 118
E K+FS++R +D P+ ++ +++ ++ D + +M
Sbjct: 357 VETEKVFSDMRS--------------RDVVPDLVCFSSMMSLFTRSGNLD--KALMYFNS 400
Query: 119 VEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKL 178
V++ D Y ++ G IS A+ +M C V T+N +L+ L K+
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 179 YGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYST 238
GE ++ + + D+ L IL+ G C+ GNL+ A + + ++ +V TY+T
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 239 LMHG-----------------------------------LCEKGNVEEAFGLLERMESEG 263
L+ G LC KG++ EAF + + M S+
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 264 IDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAK 323
I + N +I G + G +G LE+M +G P+ SY ++YG + ++ +A
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 324 ELVGRMICER--MSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
LV +M E+ + P +Y ++HG C Q +++ + VL+KM+++G P
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP 690
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 134/287 (46%), Gaps = 2/287 (0%)
Query: 85 KDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRI 144
K ++P Y +IN L + +++ +++ + L D Y + + G +
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS--PDSTTYRSLLMEACKKGDV 356
Query: 145 SKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNIL 204
+ + DM S + P + F+ +++L + + + S + G+ D IL
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 205 LKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGI 264
++G C G + A + +E +Q C +V TY+T++HGLC++ + EA L M +
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 265 DADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKE 324
D+ T ILI G K G ++ M+L ++MK K + +Y +L G AKE
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 325 LVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
+ M+ + + P+ +SY L++ LC++ + + V +M+ + P
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 4/218 (1%)
Query: 158 NCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLG--VEIDACCLNILLKGLCENGNLE 215
NC + F+L++ V A+ E +T G V IDAC N L+ L G +E
Sbjct: 160 NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDAC--NALIGSLVRIGWVE 217
Query: 216 AAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 275
A+ V E + NV T + +++ LC+ G +E+ L +++ +G+ D VT+N LI
Sbjct: 218 LAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI 277
Query: 276 SGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMS 335
S +G +EE +L+ M GKG P +Y V+ GL ++ AKE+ M+ +S
Sbjct: 278 SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Query: 336 PSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRM 373
P +Y+ L+ C + V + + V M + VP +
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 4/280 (1%)
Query: 94 YTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFD 153
Y I++ L + K + + + L F D + ++ G + A+E
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERAL--FPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 154 MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGN 213
M V T+N +L+ + I+ + +IL+ LC G+
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 214 LEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNI 273
L AF V DE +N +P V ++++ G C GN + LE+M SEG D +++N
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNT 625
Query: 274 LISGLRKQGKVEEGMKLLERMKGK--GCYPNSASYQEVLYGLLDKKRFPEAKELVGRMIC 331
LI G ++ + + L+++M+ + G P+ +Y +L+G + + EA+ ++ +MI
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685
Query: 332 ERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
++P +Y +I+G +Q + + + +M+Q+GF P
Sbjct: 686 RGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 127/277 (45%), Gaps = 4/277 (1%)
Query: 93 LYTL--IINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIET 150
+YTL ++N L + + + + + +++ + + + D YN + + G + +A E
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGV--YPDIVTYNTLISAYSSKGLMEEAFEL 292
Query: 151 LFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCE 210
+ MP P V T+N V+N L Y + ++ + G+ D+ LL C+
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 211 NGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVT 270
G++ V + ++ P++ +S++M GN+++A ++ G+ D V
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 271 FNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMI 330
+ ILI G ++G + M L M +GC + +Y +L+GL +K EA +L M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 331 CERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQ 367
+ P + LI G C +++ + +KM ++
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 1/249 (0%)
Query: 123 CRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEI 182
C +D F +I+ Y A ++ +A E + S S+ N ++ LV
Sbjct: 161 CGSNDSVFDLLIRTYVQ-ARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 183 QGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHG 242
G+Y ++ GV I+ LNI++ LC++G +E L + ++ P++ TY+TL+
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 243 LCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPN 302
KG +EEAF L+ M +G T+N +I+GL K GK E ++ M G P+
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 303 SASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLK 362
S +Y+ +L K E +++ M + P V + ++ ++
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 363 KMVQQGFVP 371
+ + G +P
Sbjct: 400 SVKEAGLIP 408
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%)
Query: 142 GRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCL 201
G++ K L + +P + T+N +++ S L E + + G
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308
Query: 202 NILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMES 261
N ++ GLC++G E A V E + P+ TY +L+ C+KG+V E + M S
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368
Query: 262 EGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLYGLLDKKRFPE 321
+ D V F+ ++S + G +++ + +K G P++ Y ++ G K
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428
Query: 322 AKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 371
A L M+ + + V+Y ++HGLC +K++ + D + +M ++ P
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP 478
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 110/263 (41%), Gaps = 40/263 (15%)
Query: 77 VLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKI 136
+ N+ ++R + P+ T++I+ + ++ Q++K EK R D YN +
Sbjct: 467 LFNEMTERALF-PDSYTLTILIDGHCKLGNLQNAMELFQKMK-EKRIRL-DVVTYNTLLD 523
Query: 137 YGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEI 196
G I A E DM S P+ ++++++N L S E ++ ++
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 197 DACCLNILLKGLCENGN-----------------------------------LEAAFYVL 221
N ++KG C +GN + AF ++
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 222 DEFPKQN--CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLR 279
+ ++ P+V TY++++HG C + ++EA +L +M G++ D T+ +I+G
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Query: 280 KQGKVEEGMKLLERMKGKGCYPN 302
Q + E ++ + M +G P+
Sbjct: 704 SQDNLTEAFRIHDEMLQRGFSPD 726
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,549,662
Number of Sequences: 539616
Number of extensions: 6003672
Number of successful extensions: 20037
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 15153
Number of HSP's gapped (non-prelim): 2547
length of query: 404
length of database: 191,569,459
effective HSP length: 120
effective length of query: 284
effective length of database: 126,815,539
effective search space: 36015613076
effective search space used: 36015613076
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)