Query         015593
Match_columns 404
No_of_seqs    173 out of 1800
Neff          10.5
Searched_HMMs 46136
Date          Fri Mar 29 07:45:50 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015593.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015593hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 2.2E-72 4.7E-77  527.3  36.3  380    3-395   102-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 4.9E-70 1.1E-74  504.0  30.9  368   12-395   116-499 (499)
  3 PLN02971 tryptophan N-hydroxyl 100.0 7.8E-68 1.7E-72  514.2  38.2  384    4-394   135-533 (543)
  4 PLN00110 flavonoid 3',5'-hydro 100.0 3.9E-66 8.4E-71  497.9  38.2  377    9-395   111-497 (504)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 4.7E-66   1E-70  500.1  38.2  381    6-394   111-508 (517)
  6 PLN03234 cytochrome P450 83B1; 100.0 4.4E-66 9.5E-71  499.5  36.9  375    9-394   109-498 (499)
  7 KOG0159 Cytochrome P450 CYP11/ 100.0 5.5E-66 1.2E-70  466.5  33.9  370   12-395   140-518 (519)
  8 PLN02394 trans-cinnamate 4-mon 100.0 3.8E-65 8.2E-70  493.4  37.9  378   10-395   112-502 (503)
  9 PLN03112 cytochrome P450 famil 100.0 6.2E-65 1.4E-69  492.9  39.4  381   11-395   114-508 (514)
 10 PLN02183 ferulate 5-hydroxylas 100.0 5.7E-65 1.2E-69  492.4  37.6  373   10-394   117-511 (516)
 11 PLN02966 cytochrome P450 83A1  100.0 1.2E-64 2.6E-69  488.9  38.5  377    8-395   109-500 (502)
 12 PTZ00404 cytochrome P450; Prov 100.0 5.7E-65 1.2E-69  489.7  35.7  370   10-394   109-482 (482)
 13 PLN00168 Cytochrome P450; Prov 100.0 1.3E-64 2.8E-69  490.2  38.0  384    5-396   114-518 (519)
 14 PLN03018 homomethionine N-hydr 100.0 3.5E-64 7.5E-69  485.5  38.9  385    5-394   119-523 (534)
 15 KOG0157 Cytochrome P450 CYP4/C 100.0 8.9E-65 1.9E-69  484.9  33.9  373   10-395   118-496 (497)
 16 PLN02738 carotene beta-ring hy 100.0 2.8E-64 6.1E-69  491.4  37.3  376   11-398   212-598 (633)
 17 PLN02655 ent-kaurene oxidase   100.0 3.4E-64 7.4E-69  481.3  37.1  379    6-397    77-466 (466)
 18 PLN02169 fatty acid (omega-1)- 100.0 3.2E-64   7E-69  483.7  34.0  366    9-394   115-499 (500)
 19 PLN02290 cytokinin trans-hydro 100.0 5.1E-64 1.1E-68  486.8  35.5  366   11-395   142-515 (516)
 20 PLN03195 fatty acid omega-hydr 100.0 2.6E-63 5.6E-68  481.5  35.1  374   11-395   113-516 (516)
 21 PLN02426 cytochrome P450, fami 100.0 9.2E-63   2E-67  473.0  36.2  364   10-395   120-500 (502)
 22 PF00067 p450:  Cytochrome P450 100.0 4.6E-63   1E-67  475.4  27.6  369   10-391    84-463 (463)
 23 PLN02500 cytochrome P450 90B1  100.0 2.4E-61 5.2E-66  464.9  36.5  351   12-393   124-488 (490)
 24 PLN02936 epsilon-ring hydroxyl 100.0 3.3E-61 7.2E-66  462.8  35.3  368   11-395    97-482 (489)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 1.7E-59 3.8E-64  447.5  37.1  353   14-396    94-451 (452)
 26 PLN02774 brassinosteroid-6-oxi 100.0 1.2E-59 2.6E-64  449.6  35.5  346   12-393   112-462 (463)
 27 PLN02196 abscisic acid 8'-hydr 100.0 1.1E-58 2.3E-63  442.8  33.6  342   13-394   117-462 (463)
 28 PLN02302 ent-kaurenoic acid ox 100.0 6.3E-58 1.4E-62  442.6  37.3  354   14-395   130-488 (490)
 29 PLN02987 Cytochrome P450, fami 100.0 5.7E-57 1.2E-61  429.8  36.7  351   11-395   115-469 (472)
 30 COG2124 CypX Cytochrome P450 [ 100.0 1.1E-54 2.3E-59  406.6  28.1  297   14-368    91-387 (411)
 31 KOG0684 Cytochrome P450 [Secon 100.0 3.1E-54 6.7E-59  381.0  28.7  359   11-395   113-485 (486)
 32 PLN02648 allene oxide synthase 100.0 3.8E-51 8.2E-56  387.2  28.0  324   13-369   117-463 (480)
 33 PF12554 MOZART1:  Mitotic-spin  72.4      15 0.00032   22.7   4.7   43  192-234     6-48  (48)
 34 KOG4189 Uncharacterized conser  64.9      48   0.001   27.3   7.5   66  172-237   112-179 (209)
 35 PF05952 ComX:  Bacillus compet  58.8     9.3  0.0002   24.5   2.1   24  214-237     4-27  (57)
 36 PF12508 DUF3714:  Protein of u  50.5      12 0.00026   31.3   2.1   43  251-295    52-94  (200)
 37 PRK06789 flagellar motor switc  48.3      18 0.00038   24.7   2.3   40  257-296    21-62  (74)
 38 PF09201 SRX:  SRX;  InterPro:   46.0      17 0.00038   27.9   2.1   23  338-360    18-40  (148)
 39 KOG3506 40S ribosomal protein   41.7      12 0.00026   23.5   0.6    9  332-340    13-21  (56)
 40 PHA03162 hypothetical protein;  34.4      36 0.00078   25.9   2.3   26  334-359     2-27  (135)
 41 PF08492 SRP72:  SRP72 RNA-bind  32.4      28  0.0006   22.6   1.2    8  314-321    44-51  (59)
 42 PF11227 DUF3025:  Protein of u  29.7      29 0.00062   29.2   1.2   20  298-317   192-211 (212)
 43 PF12444 Sox_N:  Sox developmen  27.1      44 0.00096   23.5   1.6   20  348-367    60-79  (84)
 44 PF07886 BA14K:  BA14K-like pro  26.6      58  0.0013   18.0   1.7   16  326-341    16-31  (31)
 45 PRK05933 type III secretion sy  26.1      50  0.0011   29.7   2.1   43  254-296   317-362 (372)
 46 PF14459 Prok-E2_C:  Prokaryoti  25.9      18  0.0004   26.4  -0.5   18  326-343   103-120 (131)
 47 PHA01346 hypothetical protein   25.4      59  0.0013   19.2   1.6   18  221-238    28-46  (53)
 48 COG0851 MinE Septum formation   24.6 1.4E+02  0.0029   21.2   3.6   18  222-239    35-52  (88)
 49 COG1759 5-formaminoimidazole-4  24.5 1.2E+02  0.0026   27.4   4.1   71  253-354   274-351 (361)
 50 PF04798 Baculo_19:  Baculoviru  24.5      18 0.00039   28.2  -0.8   24  326-350    56-79  (146)
 51 KOG2376 Signal recognition par  23.5      44 0.00095   32.7   1.4   26  314-342   582-607 (652)
 52 TIGR03779 Bac_Flav_CT_M Bacter  23.4      56  0.0012   30.7   2.0   45  250-296   254-298 (410)
 53 PF14129 DUF4296:  Domain of un  21.2   3E+02  0.0066   19.3   5.7   49  189-237    30-78  (87)
 54 PTZ00218 40S ribosomal protein  21.2      42 0.00091   21.2   0.5   15  332-346    11-27  (54)
 55 PF07849 DUF1641:  Protein of u  20.7 1.2E+02  0.0026   18.0   2.4   18  213-230    13-30  (42)
 56 PF11138 DUF2911:  Protein of u  20.1      83  0.0018   24.8   2.1   21  277-297    53-73  (145)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.2e-72  Score=527.27  Aligned_cols=380  Identities=42%  Similarity=0.730  Sum_probs=334.0

Q ss_pred             ccccccCCeeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHH
Q 015593            3 GKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMR   82 (404)
Q Consensus         3 ~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~~~~~~vd~~~~~~~~~~~vi~~   82 (404)
                      .+.+++++.+++++++|+.||.+||+....+++.+..++......++++.+++.+.+..++++||+...+..++.++|++
T Consensus       102 ~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~  181 (489)
T KOG0156|consen  102 LKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICR  181 (489)
T ss_pred             HHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHH
Confidence            37788899999999999999999999988899999999988888999999999998731227999999999999999999


Q ss_pred             HHhcccccCccccChHHHHHHHHHHHHHHHHhhhhccccccc-cccc----hhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015593           83 MIAGKRYYGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLP-WFKS----RDLEKRMIRCRKMRDECAQYLIEERRRNR  157 (404)
Q Consensus        83 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  157 (404)
                      ++||.++...+   .+....+.+++.+.....+.+...+++| |+..    .+..+++.....++..+++++++++++..
T Consensus       182 ~~fG~rf~~~~---~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~  258 (489)
T KOG0156|consen  182 MLFGRRFEEED---EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI  258 (489)
T ss_pred             HHhCCccccCC---chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999996542   2455668888888888888888888888 5542    24556666776779999999999988763


Q ss_pred             cCCCCCCCCccchhhHHHHHHHhcccCCCC-CChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHh
Q 015593          158 RIPSNCSGDEKTIETLIEVLLALQETDPEC-YNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQ  236 (404)
Q Consensus       158 ~~~~~~~~~~~~~~d~l~~Ll~~~~~~~~~-ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~  236 (404)
                       +    . +++  .|+++.|++..+++... +|+++|...+.++++||+|||++++.|++.+|++||++|+|+++||+++
T Consensus       259 -~----~-~~~--~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~v  330 (489)
T KOG0156|consen  259 -G----D-EEG--RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEV  330 (489)
T ss_pred             -c----c-CCC--CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence             1    1 233  79999999986543332 9999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcC
Q 015593          237 VGHGRLMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPE  316 (404)
Q Consensus       237 ~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~  316 (404)
                      +|.++.++.+|+.++|||+|+|+|++|++|++|..++|.+.+|+.++||.|||||.|.++.|++||||++|+||++|+||
T Consensus       331 vG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PE  410 (489)
T KOG0156|consen  331 VGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPE  410 (489)
T ss_pred             hCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChh
Confidence            99988899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCC-CCCCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeecCC
Q 015593          317 RFQGHQ-GARDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLPRP  395 (404)
Q Consensus       317 R~l~~~-~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  395 (404)
                      |||+.+ .+.....++|||.|+|.|||..+|++++.++++.++++|+|+++++ .+++... ++++..+.|+.+...+|.
T Consensus       411 RFl~~~d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  411 RFLDSNDGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             hhcCCccccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceecCCcceeeeecCC
Confidence            999974 3347789999999999999999999999999999999999999888 6677666 477777778888887773


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.9e-70  Score=503.97  Aligned_cols=368  Identities=24%  Similarity=0.411  Sum_probs=288.9

Q ss_pred             eeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHHHHhccccc
Q 015593           12 SLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRMIAGKRYY   90 (404)
Q Consensus        12 ~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~   90 (404)
                      ..+|..+|++||++|..++ |.||..+++.+.+++.+.++++++.+.++ ..+..+++.+.+.++|+|||++++||.+..
T Consensus       116 ~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~AfG~~~~  194 (499)
T KOG0158|consen  116 LNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCAFGLDAN  194 (499)
T ss_pred             cCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhhcccchh
Confidence            4567777999999999998 89999999999999999999999999886 322578899999999999999999999875


Q ss_pred             CccccChHHHHHHHHHHHHHHHH-hhhhc----cccccccccch-hHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 015593           91 GKHVANLEEAKRFKEVLAATFKV-AAESN----IGDFLPWFKSR-DLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCS  164 (404)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  164 (404)
                      +..+.. .++.   ......+.. ...+.    ....+|.+... ............+.+.+...++.|..+        
T Consensus       195 s~~d~~-~~F~---~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~~~v~~R~~~--------  262 (499)
T KOG0158|consen  195 SLRDPK-AEFR---RMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVNSRVEQREKE--------  262 (499)
T ss_pred             hhcCch-HHHH---HhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHHHHHHHHHhc--------
Confidence            443222 2222   111111111 11111    11123322100 000111223333444444444444221        


Q ss_pred             CCccchhhHHHHHHHhccc---C--CC-CCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhc
Q 015593          165 GDEKTIETLIEVLLALQET---D--PE-CYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVG  238 (404)
Q Consensus       165 ~~~~~~~d~l~~Ll~~~~~---~--~~-~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~  238 (404)
                      +...  +|+++.|++...+   .  .. .+|.+||+++++.+++||.||||++|++++|+||.||++|+|||+||+++..
T Consensus       263 ~~~r--~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~  340 (499)
T KOG0158|consen  263 NIER--NDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLE  340 (499)
T ss_pred             CCCC--chHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhc
Confidence            2356  8999999998642   1  11 4999999999999999999999999999999999999999999999999977


Q ss_pred             CCCCCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCccccc-ceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCc
Q 015593          239 HGRLMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVL-GYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPER  317 (404)
Q Consensus       239 ~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~-g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R  317 (404)
                      +...+|++.+.+|+||++||+||||+||++|. +.|.+++|.+++ |+.||||+.|.++.|++||||++||||++|+|||
T Consensus       341 ~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PER  419 (499)
T KOG0158|consen  341 EKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPER  419 (499)
T ss_pred             ccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCcc
Confidence            64449999999999999999999999999999 789999999999 9999999999999999999999999999999999


Q ss_pred             cCCCCC-CCCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCccccccc-CccccccCCCCceeeeecCC
Q 015593          318 FQGHQG-ARDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMRE-GTGVTMPKARPLQAKCLPRP  395 (404)
Q Consensus       318 ~l~~~~-~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~  395 (404)
                      |.+.+. ..++..|+|||.|||.|+|++||.+|+|+.|++||++|++++.+...+.... ..+.++.++.++++++.+|+
T Consensus       420 F~~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  420 FEEENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             CCCCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCccceeeecCCceEEEEEeCC
Confidence            998764 4678899999999999999999999999999999999999998833333111 12666778889999999985


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=7.8e-68  Score=514.24  Aligned_cols=384  Identities=29%  Similarity=0.536  Sum_probs=305.1

Q ss_pred             cccccCCeeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHH
Q 015593            4 KHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMR   82 (404)
Q Consensus         4 ~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~   82 (404)
                      ++++.+..++++..+|+.||++||+++.+++++...+.+.+.+.++++.+++.+.+. .+++++|+.+.+.+++++++++
T Consensus       135 ~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  214 (543)
T PLN02971        135 KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKR  214 (543)
T ss_pred             hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHH
Confidence            345555556788889999999999997677888777788889999999998888664 4456899999999999999999


Q ss_pred             HHhcccccCccc--cChHHHHHHHHHHHHHHHHhh---hhccccccccccc---hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015593           83 MIAGKRYYGKHV--ANLEEAKRFKEVLAATFKVAA---ESNIGDFLPWFKS---RDLEKRMIRCRKMRDECAQYLIEERR  154 (404)
Q Consensus        83 ~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~---~~~~~~~~~~~~~~~~~~~~~i~~~~  154 (404)
                      ++||.++.+...  .+.+. ..+.+.+..++....   ...+.+++|+++.   .+..+...+..+.+.+++..++++++
T Consensus       215 ~~fG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  293 (543)
T PLN02971        215 LMFGTRTFSEKTEPDGGPT-LEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERI  293 (543)
T ss_pred             HHhCCcccccccccccchh-HHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998632110  00011 112222233222211   1223456776532   23334455566777888888888776


Q ss_pred             HhccCCCCCCCCccchhhHHHHHHHhcccCCC-CCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHH
Q 015593          155 RNRRIPSNCSGDEKTIETLIEVLLALQETDPE-CYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREI  233 (404)
Q Consensus       155 ~~~~~~~~~~~~~~~~~d~l~~Ll~~~~~~~~-~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei  233 (404)
                      +..+..   .....  .|+++.|++..++++. .+++++|.+++.++++||+|||+++++|++++|+.||++|+|+++||
T Consensus       294 ~~~~~~---~~~~~--~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI  368 (543)
T PLN02971        294 KMWREG---KRTQI--EDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEI  368 (543)
T ss_pred             HHHhcc---CCCCC--cCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            532211   11123  6999999986443222 49999999999999999999999999999999999999999999999


Q ss_pred             hHhhcCCCCCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCC
Q 015593          234 DNQVGHGRLMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKF  313 (404)
Q Consensus       234 ~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F  313 (404)
                      +++++.++.++++++++|||++|||+|++|++|++|.+++|.+.+|++++||.|||||.|+++.|++||||++|+||++|
T Consensus       369 ~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F  448 (543)
T PLN02971        369 DRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSF  448 (543)
T ss_pred             HHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCcccc
Confidence            99999888899999999999999999999999999987899999999999999999999999999999999999999999


Q ss_pred             CcCccCCCCCC----CCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCc-ccccccCccccccCCCCce
Q 015593          314 KPERFQGHQGA----RDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEE-MVDMREGTGVTMPKARPLQ  388 (404)
Q Consensus       314 ~P~R~l~~~~~----~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~  388 (404)
                      +||||+++.+.    ..+..|+|||.|+|.|+|++||+.|++++++.||++|+|+++++. .+++.+.++ ++...+++.
T Consensus       449 ~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~  527 (543)
T PLN02971        449 KPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPLV  527 (543)
T ss_pred             CcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccce
Confidence            99999975322    245689999999999999999999999999999999999987754 466666666 554556899


Q ss_pred             eeeecC
Q 015593          389 AKCLPR  394 (404)
Q Consensus       389 ~~~~~r  394 (404)
                      +.+++|
T Consensus       528 ~~~~~~  533 (543)
T PLN02971        528 MVGELR  533 (543)
T ss_pred             eeeeec
Confidence            999999


No 4  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=3.9e-66  Score=497.94  Aligned_cols=377  Identities=34%  Similarity=0.626  Sum_probs=308.4

Q ss_pred             CCeeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHHHHhcc
Q 015593            9 NFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRMIAGK   87 (404)
Q Consensus         9 ~~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~fG~   87 (404)
                      ++.+++++.+|+.|+++||++++++|+++.++.+.+.+.+++..+++.+.+. .+++++|+.+++..+++|+|+.++||.
T Consensus       111 ~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~  190 (504)
T PLN00110        111 GAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVILSR  190 (504)
T ss_pred             CCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHHhCC
Confidence            3455777888999999999998568999999999999999999999998764 456789999999999999999999999


Q ss_pred             cccCccccChHHHHHHHHHHHHHHHHhhhhccccccccc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 015593           88 RYYGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLPWF---KSRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCS  164 (404)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  164 (404)
                      ++.....   .....+.+.+...+.......+..++|++   ......++..+..+.+.+++...++++++...     .
T Consensus       191 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~  262 (504)
T PLN00110        191 RVFETKG---SESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAH-----E  262 (504)
T ss_pred             cccccCc---hhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----c
Confidence            8632211   12244556655555443333333456643   22223345556667777888888877665321     1


Q ss_pred             CCccchhhHHHHHHHhccc-CCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcCCCCC
Q 015593          165 GDEKTIETLIEVLLALQET-DPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGHGRLM  243 (404)
Q Consensus       165 ~~~~~~~d~l~~Ll~~~~~-~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~  243 (404)
                      ....  .|+++.|++..+. ++..++++++.++++++++||+|||+++++|++++|++||++|+|+++|++++++.++.+
T Consensus       263 ~~~~--~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  340 (504)
T PLN00110        263 RKGN--PDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRL  340 (504)
T ss_pred             cccC--CChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCC
Confidence            1123  5899999976432 334699999999999999999999999999999999999999999999999999877789


Q ss_pred             ChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCCC
Q 015593          244 DESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQG  323 (404)
Q Consensus       244 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~  323 (404)
                      +++++++||||+|||+|++|++|+++..++|.+.+|++++||.|||||.|.++.+++|+||++|+||++|+||||+++..
T Consensus       341 ~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~  420 (504)
T PLN00110        341 VESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKN  420 (504)
T ss_pred             CHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCC
Confidence            99999999999999999999999999878999999999999999999999999999999999999999999999997432


Q ss_pred             C-----CCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeecCC
Q 015593          324 A-----RDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLPRP  395 (404)
Q Consensus       324 ~-----~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  395 (404)
                      .     .+.+.|+|||+|+|.|+|++||+.|++++++.|+++|+|++.++.++......++++.++.++.+.+.+|.
T Consensus       421 ~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        421 AKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             cccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCceEeeccCC
Confidence            1     12357999999999999999999999999999999999999877655444456778878889999999994


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=4.7e-66  Score=500.11  Aligned_cols=381  Identities=37%  Similarity=0.703  Sum_probs=308.1

Q ss_pred             cccCCeeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHh
Q 015593            6 MGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIA   85 (404)
Q Consensus         6 ~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~f   85 (404)
                      +++.+.+++++.+|+.|+++||+++.++|+.++++++.+.+.+++..+++.+....+++++|+.+.+..+++|+++.++|
T Consensus       111 ~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~f  190 (517)
T PLN02687        111 MAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAMV  190 (517)
T ss_pred             hccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHh
Confidence            44445677888889999999999975689999999999999999999999997643456899999999999999999999


Q ss_pred             cccccCccccChHHHHHHHHHHHHHHHHhhhhccccccccc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015593           86 GKRYYGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLPWF---KSRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSN  162 (404)
Q Consensus        86 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  162 (404)
                      |.++......  .....+.+.+..++.......+..++|++   ......++..+..+.+.+++..+++++++....   
T Consensus       191 G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---  265 (517)
T PLN02687        191 GRRVFAGDGD--EKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT---  265 (517)
T ss_pred             CccccccCCc--chHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccc---
Confidence            9987432111  22344566666555443333233456633   222222455566677888888888887665221   


Q ss_pred             CCCCccchhhHHHHHHHhccc-----CCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhh
Q 015593          163 CSGDEKTIETLIEVLLALQET-----DPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQV  237 (404)
Q Consensus       163 ~~~~~~~~~d~l~~Ll~~~~~-----~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~  237 (404)
                       .....  .|+++.|++..++     ++..++++++.+++.++++||+|||+++++|++++|+.||++|+|+++|+++++
T Consensus       266 -~~~~~--~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~  342 (517)
T PLN02687        266 -GSEEH--KDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVV  342 (517)
T ss_pred             -cCccc--ccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHc
Confidence             11234  6999999986432     234599999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCc
Q 015593          238 GHGRLMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPER  317 (404)
Q Consensus       238 ~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R  317 (404)
                      +.++.++.+++++||||+|||+|++|++|+++.+++|.+.+|++++||.|||||.|.++.|++||||++|+||++|+|||
T Consensus       343 ~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeR  422 (517)
T PLN02687        343 GRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDR  422 (517)
T ss_pred             CCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchh
Confidence            87788999999999999999999999999999877999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCC------CCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcc---cccccCccccccCCCCce
Q 015593          318 FQGHQGA------RDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEM---VDMREGTGVTMPKARPLQ  388 (404)
Q Consensus       318 ~l~~~~~------~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~  388 (404)
                      |++....      ..+..|+|||+|+|.|+|++||+.|++++++.||++|+|++.++..   ++......++..+..++.
T Consensus       423 fl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (517)
T PLN02687        423 FLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLM  502 (517)
T ss_pred             cCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeE
Confidence            9974321      2345799999999999999999999999999999999999976642   233334455555556788


Q ss_pred             eeeecC
Q 015593          389 AKCLPR  394 (404)
Q Consensus       389 ~~~~~r  394 (404)
                      +++++|
T Consensus       503 ~~~~~R  508 (517)
T PLN02687        503 VHPRPR  508 (517)
T ss_pred             EeeccC
Confidence            888888


No 6  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=4.4e-66  Score=499.51  Aligned_cols=375  Identities=29%  Similarity=0.557  Sum_probs=304.9

Q ss_pred             CCeeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHHHHhcc
Q 015593            9 NFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRMIAGK   87 (404)
Q Consensus         9 ~~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~fG~   87 (404)
                      .+..+.+..+++.|+++||.+..++|+++++.++.+.+.+.++.+++.+... ++++++|+.+.+..+++|+++.++||.
T Consensus       109 ~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~  188 (499)
T PLN03234        109 QGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQAFGK  188 (499)
T ss_pred             CCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHHHhCC
Confidence            3445556777899999999865479999999999999999999999999765 556789999999999999999999999


Q ss_pred             cccCccccChHHHHHHHHHHHHHHHHhhhhccccccccccc----hhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 015593           88 RYYGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLPWFKS----RDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNC  163 (404)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  163 (404)
                      ++....    .....+.+.+...+.......+...+||+..    ....++..++.+.+.+++..+++++++..+     
T Consensus       189 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----  259 (499)
T PLN03234        189 RYNEYG----TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNR-----  259 (499)
T ss_pred             cccccc----hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----
Confidence            875432    2234444544443333222223344554421    222355677888888889888887654311     


Q ss_pred             CCCccchhhHHHHHHHhcccCC--CCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcCCC
Q 015593          164 SGDEKTIETLIEVLLALQETDP--ECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGHGR  241 (404)
Q Consensus       164 ~~~~~~~~d~l~~Ll~~~~~~~--~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~  241 (404)
                      .....  .|+++.|++..++++  ..+++++|.+++.++++||+|||+++++|++++|++||++|+|+++|+++++++..
T Consensus       260 ~~~~~--~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~  337 (499)
T PLN03234        260 PKQET--ESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKG  337 (499)
T ss_pred             cCCCc--ccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC
Confidence            11234  689999887543322  35899999999999999999999999999999999999999999999999998877


Q ss_pred             CCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCC-CCCCCCCcCccCC
Q 015593          242 LMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIW-EDPRKFKPERFQG  320 (404)
Q Consensus       242 ~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~  320 (404)
                      .++++++++|||++|||+|++|++|++|..++|.+.+|++++||.|||||.|.++.|++||||++| +||++||||||++
T Consensus       338 ~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~  417 (499)
T PLN03234        338 YVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMK  417 (499)
T ss_pred             CCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcC
Confidence            889999999999999999999999999987789999999999999999999999999999999999 8999999999997


Q ss_pred             CCCC----CCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCc---ccccccCccccccCCCCceeeeec
Q 015593          321 HQGA----RDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEE---MVDMREGTGVTMPKARPLQAKCLP  393 (404)
Q Consensus       321 ~~~~----~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  393 (404)
                      +...    .....|+|||+|+|+|+|+++|+.|+++++|.|+++|+|+++++.   .+.....+++++.+++++.+.+++
T Consensus       418 ~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (499)
T PLN03234        418 EHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTK  497 (499)
T ss_pred             CCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeec
Confidence            5322    346689999999999999999999999999999999999998763   234445668888777777777776


Q ss_pred             C
Q 015593          394 R  394 (404)
Q Consensus       394 r  394 (404)
                      |
T Consensus       498 ~  498 (499)
T PLN03234        498 H  498 (499)
T ss_pred             C
Confidence            5


No 7  
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.5e-66  Score=466.49  Aligned_cols=370  Identities=23%  Similarity=0.361  Sum_probs=313.7

Q ss_pred             eeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh-c---CCCcchhhHHHHHHHHHHHHHHHhcc
Q 015593           12 SLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-Q---LIESVDLRMEIYDLTMNVMMRMIAGK   87 (404)
Q Consensus        12 ~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~-~---~~~~vd~~~~~~~~~~~vi~~~~fG~   87 (404)
                      ..++..+|++|++.|..+++..+++++++.|.+.+++.++++++.+... +   +..+-|+.+.+.++++..||.++||+
T Consensus       140 ~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wslEsi~~V~l~~  219 (519)
T KOG0159|consen  140 CGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSLESICLVLLGT  219 (519)
T ss_pred             CCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHhc
Confidence            3455666999999999999888999999999999999999999999887 3   33478999999999999999999999


Q ss_pred             cccCccccChHHHHHHHHHHHHHHHHhhhhccccccc-ccc--chhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 015593           88 RYYGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLP-WFK--SRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCS  164 (404)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  164 (404)
                      ++........+....|.+++..++.....   .++.| |.+  .+...+++.++.+.+.++..+.|+...++.+......
T Consensus       220 rlG~L~~~~~~~a~~fi~ai~~~F~~s~~---l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l~~l~~~~~~~  296 (519)
T KOG0159|consen  220 RLGLLGESPPSEAQQFIDAIKKMFESSAQ---LMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNALEELEKQDSAG  296 (519)
T ss_pred             ccccccCCCCHHHHHHHHHHHHHHHhHHH---HHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            98654444457788899998888876432   22233 222  1223367777778888888888888777655433222


Q ss_pred             CCccchhhHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcC-CCCC
Q 015593          165 GDEKTIETLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGH-GRLM  243 (404)
Q Consensus       165 ~~~~~~~d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~-~~~~  243 (404)
                       .+.  ..++..++...     .++.+++...++++++||.|||+.++.|+||+|++||++|++|++|+.++++. +..+
T Consensus       297 -~~~--~~~l~~~L~~~-----~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~  368 (519)
T KOG0159|consen  297 -SEY--TGSLLELLLRK-----ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSEL  368 (519)
T ss_pred             -cch--hHHHHHHHHHc-----cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCccccc
Confidence             122  44555555442     28899999999999999999999999999999999999999999999999988 6888


Q ss_pred             ChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCC-
Q 015593          244 DESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQ-  322 (404)
Q Consensus       244 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~-  322 (404)
                      +.+++.++|||.|||||++||||.+|+ ..|...+|+.++||.|||||.|.+..+.+.+||++|++|++|+|||||.+. 
T Consensus       369 ~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~  447 (519)
T KOG0159|consen  369 TQKALTNMPYLRACIKETLRLYPVVPG-NGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST  447 (519)
T ss_pred             chHHHhhCHHHHHHHHhhhceeccccc-cccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc
Confidence            999999999999999999999999999 479999999999999999999999999999999999999999999999987 


Q ss_pred             CCCCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeecCC
Q 015593          323 GARDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLPRP  395 (404)
Q Consensus       323 ~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  395 (404)
                      +..++..++|||.|+|+|+|+++|.+||.++||.++++|+++..++.++++  .+.++..|..++.++|.+|+
T Consensus       448 ~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~--~~~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  448 KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEY--VYRFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccc--eeEEEEcCCCCcceeeeeCC
Confidence            678899999999999999999999999999999999999999988775544  44556667789999999986


No 8  
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.8e-65  Score=493.44  Aligned_cols=378  Identities=29%  Similarity=0.548  Sum_probs=291.2

Q ss_pred             CeeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh--cCCCcchhhHHHHHHHHHHHHHHHhcc
Q 015593           10 FTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN--QLIESVDLRMEIYDLTMNVMMRMIAGK   87 (404)
Q Consensus        10 ~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~--~~~~~vd~~~~~~~~~~~vi~~~~fG~   87 (404)
                      +.+.+++.+|++|+++||.+..++|+++.++.+.+.+.++++.+++.+...  ..++.+|+.+.+..+++|++++++||.
T Consensus       112 ~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~~~fG~  191 (503)
T PLN02394        112 GQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYRMMFDR  191 (503)
T ss_pred             CCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHHHHhCC
Confidence            456677788999999999986579999999999999999999999999764  224569999999999999999999999


Q ss_pred             cccCccccChHHHHHHHHHHHHHHHHhhh--hccccccccccc--hhHHHHHHHHHHHHHH-HHHHHHHHHHHhccCCCC
Q 015593           88 RYYGKHVANLEEAKRFKEVLAATFKVAAE--SNIGDFLPWFKS--RDLEKRMIRCRKMRDE-CAQYLIEERRRNRRIPSN  162 (404)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~--~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~  162 (404)
                      ++...+.   .....+.............  ..+..++|++..  ....+........... +...+++++++...... 
T Consensus       192 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-  267 (503)
T PLN02394        192 RFESEDD---PLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKKLMSAKG-  267 (503)
T ss_pred             Ccccccc---hhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-
Confidence            8854321   2223333333322222111  122344554431  1111222222222222 22334555543211110 


Q ss_pred             CCCCccchhhHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcCCCC
Q 015593          163 CSGDEKTIETLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGHGRL  242 (404)
Q Consensus       163 ~~~~~~~~~d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~  242 (404)
                      ...+..  .|+++.|++..++  ..++++++..++.++++||+||||++++|++|+|++||++|+||++||+++++.++.
T Consensus       268 ~~~~~~--~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~  343 (503)
T PLN02394        268 MDKEGL--KCAIDHILEAQKK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQ  343 (503)
T ss_pred             CCcchh--hhHHHHHHhcccc--CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCC
Confidence            011233  7999999986543  248999999999999999999999999999999999999999999999999987777


Q ss_pred             CChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCC
Q 015593          243 MDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQ  322 (404)
Q Consensus       243 ~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~  322 (404)
                      ++++++++||||+|||+|++|++|++|..++|.+.+|+.++||.|||||.|.++.|++||||++|+||++|+||||++++
T Consensus       344 ~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~  423 (503)
T PLN02394        344 VTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEE  423 (503)
T ss_pred             CCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCC
Confidence            89999999999999999999999999998889999999999999999999999999999999999999999999999753


Q ss_pred             CC----CCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcc-cccccCcc-ccccCCCCceeeeecCC
Q 015593          323 GA----RDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEM-VDMREGTG-VTMPKARPLQAKCLPRP  395 (404)
Q Consensus       323 ~~----~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~r~  395 (404)
                      +.    .....|+|||+|+|+|+|++||+.|+++++|.++++|+|++.++.+ ++.....+ .....+.++++++.+|.
T Consensus       424 ~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        424 AKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             CcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecCC
Confidence            21    2356899999999999999999999999999999999999877763 55554443 34424458999999995


No 9  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=6.2e-65  Score=492.93  Aligned_cols=381  Identities=36%  Similarity=0.671  Sum_probs=307.0

Q ss_pred             eeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHHHHhcccc
Q 015593           11 TSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRMIAGKRY   89 (404)
Q Consensus        11 ~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~fG~~~   89 (404)
                      ..++++.+|++|+++||++..++|+.++++.+.+.+.++++.+++.+.+. .+++++|+.+.+..+++++++.++||.++
T Consensus       114 ~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~  193 (514)
T PLN03112        114 GDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRMLLGKQY  193 (514)
T ss_pred             CceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHHHcCCcc
Confidence            44567778999999999976578999999999999999999999988764 44668999999999999999999999987


Q ss_pred             cCccccChHHHHHHHHHHHHHHHHhhhhcccccccccc---chhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 015593           90 YGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLPWFK---SRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCSGD  166 (404)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  166 (404)
                      ........+....+.+++..++.......+..++|+++   .....++..+..+.+.+++..+++++++......  ...
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~  271 (514)
T PLN03112        194 FGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKL--PGG  271 (514)
T ss_pred             ccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--cCC
Confidence            43221111233456666666554432223334556332   1222345666777788888888887765422111  112


Q ss_pred             ccchhhHHHHHHHhcccCC-CCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcCCCCCCh
Q 015593          167 EKTIETLIEVLLALQETDP-ECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGHGRLMDE  245 (404)
Q Consensus       167 ~~~~~d~l~~Ll~~~~~~~-~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~  245 (404)
                      ..  .|+++.|++...+++ ..+++++|.++++++++||+|||+++++|++++|++||++|+||++|+++++++++.+++
T Consensus       272 ~~--~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~  349 (514)
T PLN03112        272 KD--MDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQE  349 (514)
T ss_pred             cc--chHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCCh
Confidence            34  699999998643322 258999999999999999999999999999999999999999999999999988778999


Q ss_pred             hhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCCCC-
Q 015593          246 SDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQGA-  324 (404)
Q Consensus       246 ~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~-  324 (404)
                      +++++||||+|||+|++|++|+++.+++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+|+||++..+. 
T Consensus       350 ~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~  429 (514)
T PLN03112        350 SDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSR  429 (514)
T ss_pred             hhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCc
Confidence            9999999999999999999999998778999999999999999999999999999999999999999999998753211 


Q ss_pred             -----CCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCc---ccccccCccccccCCCCceeeeecCC
Q 015593          325 -----RDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEE---MVDMREGTGVTMPKARPLQAKCLPRP  395 (404)
Q Consensus       325 -----~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~  395 (404)
                           ..+..|+|||.|+|+|+|++||+.|++++++.++++|+|++.++.   .+......++++++..++.+.+.||.
T Consensus       430 ~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        430 VEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             cccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCC
Confidence                 124579999999999999999999999999999999999987653   23343455677777779999999994


No 10 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=5.7e-65  Score=492.43  Aligned_cols=373  Identities=34%  Similarity=0.632  Sum_probs=296.6

Q ss_pred             CeeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHhcccc
Q 015593           10 FTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAGKRY   89 (404)
Q Consensus        10 ~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~   89 (404)
                      +.+.+++.+|+.|+++||++..++|+.+.++.+.+. .+++..+++.+.. ..++++|+.+++..+++|++++++||.++
T Consensus       117 ~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~-~~~~~v~~~~~~~~~~~~vi~~~~fG~~~  194 (516)
T PLN02183        117 RADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSS-NIGKPVNIGELIFTLTRNITYRAAFGSSS  194 (516)
T ss_pred             CCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHh-cCCCcEeHHHHHHHHHHHHHHhHhhcCcc
Confidence            346678888999999999954479999999998885 4678999999865 34578999999999999999999999876


Q ss_pred             cCccccChHHHHHHHHHHHHHHHHhhhhccccccccccc---hhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC--C
Q 015593           90 YGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLPWFKS---RDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNC--S  164 (404)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~  164 (404)
                      ....       ..+.+.+..+...........++||+..   ....++..++.+.+.+++..+++++++..+.....  +
T Consensus       195 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  267 (516)
T PLN02183        195 NEGQ-------DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDS  267 (516)
T ss_pred             cchH-------HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence            3221       2344444444443333334455665531   12234566677788888888888776543211100  1


Q ss_pred             CCccchhhHHHHHHHhccc-----------CCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHH
Q 015593          165 GDEKTIETLIEVLLALQET-----------DPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREI  233 (404)
Q Consensus       165 ~~~~~~~d~l~~Ll~~~~~-----------~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei  233 (404)
                      .+..  .|+++.|++....           ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus       268 ~~~~--~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei  345 (516)
T PLN02183        268 EEAE--TDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQEL  345 (516)
T ss_pred             cccc--ccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            1123  6899999975321           12258999999999999999999999999999999999999999999999


Q ss_pred             hHhhcCCCCCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCC
Q 015593          234 DNQVGHGRLMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKF  313 (404)
Q Consensus       234 ~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F  313 (404)
                      +++++.++.++.+++++||||+|||+|++|++|++|+. .|.+.+|++++||.|||||.|.++.|++||||++|+||++|
T Consensus       346 ~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F  424 (516)
T PLN02183        346 ADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTF  424 (516)
T ss_pred             HHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCcccc
Confidence            99998767789999999999999999999999999995 69999999999999999999999999999999999999999


Q ss_pred             CcCccCCCCCC---CCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcc---cccccCccccccCCCCc
Q 015593          314 KPERFQGHQGA---RDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEM---VDMREGTGVTMPKARPL  387 (404)
Q Consensus       314 ~P~R~l~~~~~---~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~  387 (404)
                      +||||++++..   .+.+.|+|||.|+|+|+|++||++|+++++|.|+++|+|+..++..   .+....++.+.+...++
T Consensus       425 ~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (516)
T PLN02183        425 KPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRL  504 (516)
T ss_pred             CchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCc
Confidence            99999975332   2456899999999999999999999999999999999999877642   33333445555555688


Q ss_pred             eeeeecC
Q 015593          388 QAKCLPR  394 (404)
Q Consensus       388 ~~~~~~r  394 (404)
                      .+.+++|
T Consensus       505 ~~~~~~r  511 (516)
T PLN02183        505 VAVPTYR  511 (516)
T ss_pred             EEEeecC
Confidence            8888887


No 11 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.2e-64  Score=488.92  Aligned_cols=377  Identities=28%  Similarity=0.541  Sum_probs=293.9

Q ss_pred             cCCeeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHHHHhc
Q 015593            8 CNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRMIAG   86 (404)
Q Consensus         8 ~~~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~fG   86 (404)
                      .+..++.+..+|+.|+++||++..++|++++++++.+.+.+.+..+++.|.+. .+++++|+.+++..+++|+++.++||
T Consensus       109 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~~fG  188 (502)
T PLN02966        109 YGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFG  188 (502)
T ss_pred             cCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHHHhC
Confidence            34445556677999999999944489999999999999999999999999765 44568999999999999999999999


Q ss_pred             ccccCccccChHHHHHHHHHHHHHHHHhhhhcccccccccc----chhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015593           87 KRYYGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLPWFK----SRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSN  162 (404)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  162 (404)
                      .++...+    +....+.+++...........+..++|++.    .....+......+...+++.+.+++.....+.   
T Consensus       189 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---  261 (502)
T PLN02966        189 KKYNEDG----EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRV---  261 (502)
T ss_pred             CccCccc----hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcccc---
Confidence            9875332    222345555544443322222234455321    11111223344455666666666665433110   


Q ss_pred             CCCCccchhhHHHHHHHhcccC--CCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcC-
Q 015593          163 CSGDEKTIETLIEVLLALQETD--PECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGH-  239 (404)
Q Consensus       163 ~~~~~~~~~d~l~~Ll~~~~~~--~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~-  239 (404)
                        ....  .++++.|++..+++  +..++++++.++++++++||+|||+++|+|++++|++||++|+|+++|++++++. 
T Consensus       262 --~~~~--~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~  337 (502)
T PLN02966        262 --KPET--ESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEK  337 (502)
T ss_pred             --cccc--ccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccc
Confidence              1123  68999999764432  3458999999999999999999999999999999999999999999999999975 


Q ss_pred             -CCCCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCC-CCCCCCCcCc
Q 015593          240 -GRLMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIW-EDPRKFKPER  317 (404)
Q Consensus       240 -~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~P~R  317 (404)
                       ++.++++++++||||+|||+|++|++|++|..++|.+.+|++++||.|||||.|.++.|++||||++| |||++|+|||
T Consensus       338 ~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR  417 (502)
T PLN02966        338 GSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPER  417 (502)
T ss_pred             CCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhh
Confidence             24679999999999999999999999999987789999999999999999999999999999999999 9999999999


Q ss_pred             cCCCCCC--CCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcc---cccccCccccccCCCCceeeee
Q 015593          318 FQGHQGA--RDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEM---VDMREGTGVTMPKARPLQAKCL  392 (404)
Q Consensus       318 ~l~~~~~--~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  392 (404)
                      |++.+..  .....|+|||.|+|+|+|++||+.|+++++|.+|++|+|++.++..   ++.....+++...+.++.+..+
T Consensus       418 wl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (502)
T PLN02966        418 FLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPE  497 (502)
T ss_pred             hcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEEE
Confidence            9975332  3456899999999999999999999999999999999999987652   3444555666644445655544


Q ss_pred             cCC
Q 015593          393 PRP  395 (404)
Q Consensus       393 ~r~  395 (404)
                      +-+
T Consensus       498 ~~~  500 (502)
T PLN02966        498 KVN  500 (502)
T ss_pred             eCC
Confidence            433


No 12 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=5.7e-65  Score=489.66  Aligned_cols=370  Identities=22%  Similarity=0.349  Sum_probs=289.6

Q ss_pred             CeeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHHHHhccc
Q 015593           10 FTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRMIAGKR   88 (404)
Q Consensus        10 ~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~fG~~   88 (404)
                      +.+++ +.+|+.|+++|++++ +.|+.+.++.+.+.+.+.+..+++.|.+. +.++.+|+.+.+.++++|+++.++||.+
T Consensus       109 ~~~l~-~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~  186 (482)
T PTZ00404        109 YHGIV-TSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYIFNED  186 (482)
T ss_pred             CCcee-ccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhccc
Confidence            34544 457999999999998 79999999999999999999999999764 4466799999999999999999999998


Q ss_pred             ccCccccChHHHHHHHHHHHHHHHHhhhhccccccccccc--hhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 015593           89 YYGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLPWFKS--RDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCSGD  166 (404)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  166 (404)
                      +........+....+...+..++..........+++++..  ....+...+..+.+.+++.+.++++++..      ..+
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~  260 (482)
T PTZ00404        187 ISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTI------DPE  260 (482)
T ss_pred             cccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------CCC
Confidence            7432111112224455555555544332222233333221  11112233445566666666666544331      111


Q ss_pred             ccchhhHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcCCCCCChh
Q 015593          167 EKTIETLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGHGRLMDES  246 (404)
Q Consensus       167 ~~~~~d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~  246 (404)
                      ..  .|+++.|++...+.. .....+|++++.++++||+|||+++++|++++|++||++|+||++|++++++++..++++
T Consensus       261 ~~--~dll~~ll~~~~~~~-~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~  337 (482)
T PTZ00404        261 VP--RDLLDLLIKEYGTNT-DDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLS  337 (482)
T ss_pred             Cc--ccHHHHHHHHhccCC-cccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCcc
Confidence            24  689999998642211 122335889999999999999999999999999999999999999999999876778999


Q ss_pred             hccCChhHHHHHHhhcCCCCCCCccCccccCCcccc-cceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCCCCC
Q 015593          247 DMARLPYLGSIINETLRMYPPAPMLMPHESSDECTV-LGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQGAR  325 (404)
Q Consensus       247 ~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~-~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~  325 (404)
                      ++++||||+|||+|++|++|++|.+++|.+.+|+++ +||.|||||.|.++.+++||||++||||++|+||||++.   .
T Consensus       338 ~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~---~  414 (482)
T PTZ00404        338 DRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNP---D  414 (482)
T ss_pred             ccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCC---C
Confidence            999999999999999999999997678999999999 999999999999999999999999999999999999974   2


Q ss_pred             CCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeecC
Q 015593          326 DGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLPR  394 (404)
Q Consensus       326 ~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  394 (404)
                      ....|+|||.|+|.|+|++||++|++++++.++++|+|+.++++++......++++. +.++.+.+.+|
T Consensus       415 ~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        415 SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence            456899999999999999999999999999999999999877665433334466665 45788888876


No 13 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.3e-64  Score=490.25  Aligned_cols=384  Identities=27%  Similarity=0.464  Sum_probs=298.6

Q ss_pred             ccccCCeeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHHH
Q 015593            5 HMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRM   83 (404)
Q Consensus         5 ~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~   83 (404)
                      +++.++..+.+..+|+.|+++||.+..++|++++++.+.+.+.++++.+++.+.+. ..++++|+.+.+..++.++++.+
T Consensus       114 ~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~~  193 (519)
T PLN00168        114 LLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLVLM  193 (519)
T ss_pred             hhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHH
Confidence            34443333444578999999998544489999999999999999999999999765 33457899999999999999999


Q ss_pred             HhcccccCccccChHHHHHHHHHHHHHHHHh-hhhcccccccccc---chhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015593           84 IAGKRYYGKHVANLEEAKRFKEVLAATFKVA-AESNIGDFLPWFK---SRDLEKRMIRCRKMRDECAQYLIEERRRNRRI  159 (404)
Q Consensus        84 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  159 (404)
                      +||.++.+.      ....+......+.... ....+..++|++.   .....++..+..+.+.+++..+++++++....
T Consensus       194 ~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  267 (519)
T PLN00168        194 CFGERLDEP------AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNH  267 (519)
T ss_pred             HcCCCcChh------hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999987422      1122333333222111 1223345567442   11112344556778888888888877654211


Q ss_pred             --C-CCCC---CCccchhhHHHHHHHhcc--cCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHH
Q 015593          160 --P-SNCS---GDEKTIETLIEVLLALQE--TDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQR  231 (404)
Q Consensus       160 --~-~~~~---~~~~~~~d~l~~Ll~~~~--~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~  231 (404)
                        . +...   ....  .|+++.|++...  +++..+++++|.++++++++||+|||+++++|++++|+.||++|+|+++
T Consensus       268 ~~~~~~~~~~~~~~~--~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~  345 (519)
T PLN00168        268 LGQGGEPPKKETTFE--HSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHD  345 (519)
T ss_pred             ccccCcccccccccc--ccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence              0 0000   0113  689999997642  2234599999999999999999999999999999999999999999999


Q ss_pred             HHhHhhcC-CCCCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCC
Q 015593          232 EIDNQVGH-GRLMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDP  310 (404)
Q Consensus       232 Ei~~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p  310 (404)
                      ||+++++. .+.++.+++++||||+|||+|++|++|+++..++|.+.+|++++||.|||||.|.++.+++||||++||||
T Consensus       346 Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p  425 (519)
T PLN00168        346 EIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERP  425 (519)
T ss_pred             HHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCc
Confidence            99999986 36789999999999999999999999999987899999999999999999999999999999999999999


Q ss_pred             CCCCcCccCCCCC-------CCCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccC
Q 015593          311 RKFKPERFQGHQG-------ARDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPK  383 (404)
Q Consensus       311 ~~F~P~R~l~~~~-------~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  383 (404)
                      ++|+||||++...       ..+...|+|||.|+|+|+|++||+.|++++++.||++|+|++.++.+++.....+++..+
T Consensus       426 ~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  505 (519)
T PLN00168        426 MEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTVM  505 (519)
T ss_pred             cccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEee
Confidence            9999999997421       123457999999999999999999999999999999999999776544443333445555


Q ss_pred             CCCceeeeecCCc
Q 015593          384 ARPLQAKCLPRPT  396 (404)
Q Consensus       384 ~~~~~~~~~~r~~  396 (404)
                      +.++.+.+.+|+.
T Consensus       506 ~~~~~~~~~~R~~  518 (519)
T PLN00168        506 AKPLRARLVPRRT  518 (519)
T ss_pred             cCCcEEEEEeccC
Confidence            6689999999864


No 14 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=3.5e-64  Score=485.45  Aligned_cols=385  Identities=29%  Similarity=0.488  Sum_probs=294.0

Q ss_pred             ccccCCeeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHHH
Q 015593            5 HMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRM   83 (404)
Q Consensus         5 ~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~   83 (404)
                      .++.++.+++++.+|+.|+++||++++.+++......+.+.+..+++.+++.+.+. ..++++|+.+.+.++++|+++++
T Consensus       119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~  198 (534)
T PLN03018        119 TIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRM  198 (534)
T ss_pred             hhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHH
Confidence            35555557888888999999999998444555555556566667889999999764 44567999999999999999999


Q ss_pred             HhcccccCccc---cChHHHHHHHHHHHHHHHH---hhhhccccccc-cccc---hhHHHHHHHHHHHHHHHHHHHHHHH
Q 015593           84 IAGKRYYGKHV---ANLEEAKRFKEVLAATFKV---AAESNIGDFLP-WFKS---RDLEKRMIRCRKMRDECAQYLIEER  153 (404)
Q Consensus        84 ~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P-~l~~---~~~~~~~~~~~~~~~~~~~~~i~~~  153 (404)
                      +||.++.....   ........+...+......   .....+.+++| |++.   .+..++.....+.+.+++..+++++
T Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  278 (534)
T PLN03018        199 LFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDER  278 (534)
T ss_pred             HhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998732110   0011111222222222221   11112223444 5431   1222344445567788888888877


Q ss_pred             HHhccCCCCCCCCccchhhHHHHHHHhcccCCC-CCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHH
Q 015593          154 RRNRRIPSNCSGDEKTIETLIEVLLALQETDPE-CYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQRE  232 (404)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~d~l~~Ll~~~~~~~~-~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~E  232 (404)
                      ++..+...  +....  .|+++.|++..++++. .+++++|++++.++++||+|||+++++|++++|+.||++|+|+++|
T Consensus       279 ~~~~~~~~--~~~~~--~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~E  354 (534)
T PLN03018        279 VELWREKG--GKAAV--EDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKE  354 (534)
T ss_pred             HHHhhhcc--CCCCc--ccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            65321110  11123  6899999976543333 4899999999999999999999999999999999999999999999


Q ss_pred             HhHhhcCCCCCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCC
Q 015593          233 IDNQVGHGRLMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRK  312 (404)
Q Consensus       233 i~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~  312 (404)
                      |+++++.++.++.+++.+||||+|||+|++|++|++|...+|.+.+|++++||.|||||.|.++.|++||||++|+||++
T Consensus       355 i~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~  434 (534)
T PLN03018        355 LDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLV  434 (534)
T ss_pred             HHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccc
Confidence            99999877789999999999999999999999999998768999999999999999999999999999999999999999


Q ss_pred             CCcCccCCCCCC-------CCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCc-ccccccCccccccCC
Q 015593          313 FKPERFQGHQGA-------RDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEE-MVDMREGTGVTMPKA  384 (404)
Q Consensus       313 F~P~R~l~~~~~-------~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~  384 (404)
                      |+||||++.++.       ..+..|+|||+|+|.|+|++||+.|++++++.|+++|+|++.++. .++.....+.+.. +
T Consensus       435 F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-p  513 (534)
T PLN03018        435 YEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLLM-A  513 (534)
T ss_pred             cCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCccccccceec-C
Confidence            999999974331       234689999999999999999999999999999999999987653 3333333354444 4


Q ss_pred             CCceeeeecC
Q 015593          385 RPLQAKCLPR  394 (404)
Q Consensus       385 ~~~~~~~~~r  394 (404)
                      .++.|.+.+|
T Consensus       514 ~~~~v~~~~R  523 (534)
T PLN03018        514 KPLLLSVEPR  523 (534)
T ss_pred             CCeEEEEEec
Confidence            5899999999


No 15 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=8.9e-65  Score=484.90  Aligned_cols=373  Identities=24%  Similarity=0.457  Sum_probs=296.0

Q ss_pred             CeeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHhcccc
Q 015593           10 FTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAGKRY   89 (404)
Q Consensus        10 ~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~   89 (404)
                      |.++++++ |+.|+++||+++ ++|+.+.++.+...+.+.+..++..+.....++.+|+.+.++++++|+++.++||...
T Consensus       118 G~gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~~~G~~~  195 (497)
T KOG0157|consen  118 GDGLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKTAMGPES  195 (497)
T ss_pred             cCccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHHhcCCcc
Confidence            34688887 999999999998 7999999999999999999998888877533334999999999999999999999332


Q ss_pred             -cCccccChHHHHHHHHHHHHHHHHhhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCcc
Q 015593           90 -YGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLPWFKSRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCSGDEK  168 (404)
Q Consensus        90 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  168 (404)
                       ........++..++..+..-+......+.   ...|+......++..++.+.+++++.++|+++++...+.+.......
T Consensus       196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~---~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~~~~  272 (497)
T KOG0157|consen  196 LDAEGPELFEYVQAFDDLTELISKRINLPL---GTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGEEKKR  272 (497)
T ss_pred             ccccCCcccHHHHHHHHHHHHHHHHHcCch---hhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchh
Confidence             22222222344444333332222211110   11222222244678889999999999999998876443221111233


Q ss_pred             chhhHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcCCCC-CChhh
Q 015593          169 TIETLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGHGRL-MDESD  247 (404)
Q Consensus       169 ~~~d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~-~~~~~  247 (404)
                        .|+++.+....+   ..+++++|.+++.+|++||+|||+++++|++++|+.||++|+|+++|++++++.... ....+
T Consensus       273 --~d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~  347 (497)
T KOG0157|consen  273 --LDFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEK  347 (497)
T ss_pred             --hhHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhh
Confidence              788886333222   559999999999999999999999999999999999999999999999999985332 23333


Q ss_pred             ccCChhHHHHHHhhcCCCCCCCccCccccCCcccc-cceEeCCCCEEEEechhhhcCCCCCC-CCCCCCcCccCCCCC--
Q 015593          248 MARLPYLGSIINETLRMYPPAPMLMPHESSDECTV-LGYSIPRGTTLLVNIWAIQNDPKIWE-DPRKFKPERFQGHQG--  323 (404)
Q Consensus       248 ~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~-~g~~Ip~Gt~v~~~~~~~~~d~~~~~-~p~~F~P~R~l~~~~--  323 (404)
                      .++|+||++||+||||||||+|. ..|.+.+|+++ +||.||||+.|.++++++|||+.+|+ ||++||||||+++..  
T Consensus       348 ~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~  426 (497)
T KOG0157|consen  348 LDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKA  426 (497)
T ss_pred             hhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcC
Confidence            33799999999999999999998 57999999999 58999999999999999999999995 999999999997433  


Q ss_pred             CCCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeecCC
Q 015593          324 ARDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLPRP  395 (404)
Q Consensus       324 ~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  395 (404)
                      ..++++|+|||+|+|.|+|++||++|++++++.++++|+|+++++..  ......+++.+..+++|++.+|.
T Consensus       427 ~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  427 KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEEEEecCCeEEEEEeCC
Confidence            35678999999999999999999999999999999999999988764  45566888889999999999985


No 16 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=2.8e-64  Score=491.43  Aligned_cols=376  Identities=21%  Similarity=0.365  Sum_probs=288.9

Q ss_pred             eeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHHHHhcccc
Q 015593           11 TSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRMIAGKRY   89 (404)
Q Consensus        11 ~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~fG~~~   89 (404)
                      .++++ .+|+.|+++|+.+. ++|+.+.++.+.+.+.++++.+++.+.+. ..++++|+...+..+++|+|+.++||.++
T Consensus       212 ~~l~~-~dge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~  289 (633)
T PLN02738        212 KGLIP-ADGEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDF  289 (633)
T ss_pred             Cceec-CCcHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCc
Confidence            45554 56999999999998 79999999999999999999999999775 55679999999999999999999999987


Q ss_pred             cCccccChHHHHHHHHHHHHHHHHhhhhcccccccccc-chhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC----C-
Q 015593           90 YGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLPWFK-SRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSN----C-  163 (404)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~-  163 (404)
                      ...... ......+...+...............+|.+. .....++..++.+.+..+...+++.+++..++...    . 
T Consensus       290 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~  368 (633)
T PLN02738        290 DSLSND-TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEY  368 (633)
T ss_pred             cccccc-hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcc
Confidence            532211 1233333333332221110100001122111 11112334445555566666666544332111000    0 


Q ss_pred             CCCccchhhHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcCCCCC
Q 015593          164 SGDEKTIETLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGHGRLM  243 (404)
Q Consensus       164 ~~~~~~~~d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~  243 (404)
                      .....  .|+++.|++..    ..+++++|.++++++++||+|||+++|+|++++|++||++|+|||+|+++++++ +.+
T Consensus       369 ~~~~~--~dil~~Ll~~~----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~  441 (633)
T PLN02738        369 MNERD--PSILHFLLASG----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFP  441 (633)
T ss_pred             ccccc--chHHHHHHHcC----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCC
Confidence            01223  58999998753    248999999999999999999999999999999999999999999999999984 678


Q ss_pred             ChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCCC
Q 015593          244 DESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQG  323 (404)
Q Consensus       244 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~  323 (404)
                      +++++++||||+|||+|+|||+|+++. .+|.+.+|.+++||.|||||.|.++.|.+||||++||||++|+||||+....
T Consensus       442 t~edL~kLPYL~AVIkEtLRL~p~~p~-~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~  520 (633)
T PLN02738        442 TIEDMKKLKYTTRVINESLRLYPQPPV-LIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGP  520 (633)
T ss_pred             CHHHHccCHHHHHHHHHHHhcCCCccc-cceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCC
Confidence            999999999999999999999999998 4688899999999999999999999999999999999999999999995321


Q ss_pred             ----CCCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeecCCccc
Q 015593          324 ----ARDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLPRPTMV  398 (404)
Q Consensus       324 ----~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  398 (404)
                          ......|+|||.|+|.|+|++||+.|+++++|.|+++|+|++.++.+ +.....+.++.+..++.+++++|..|-
T Consensus       521 ~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~~~  598 (633)
T PLN02738        521 NPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTKPP  598 (633)
T ss_pred             CccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCCCC
Confidence                13456899999999999999999999999999999999999977653 222233456666678999999997764


No 17 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=3.4e-64  Score=481.33  Aligned_cols=379  Identities=26%  Similarity=0.460  Sum_probs=298.7

Q ss_pred             cccCCeeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh---cCCCcchhhHHHHHHHHHHHHH
Q 015593            6 MGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN---QLIESVDLRMEIYDLTMNVMMR   82 (404)
Q Consensus         6 ~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~---~~~~~vd~~~~~~~~~~~vi~~   82 (404)
                      +++++..++++++|+.|+++||.+.+++|+...++.+.+.+.+.+..+++.+.+.   ..++++|+.+.+..+++|+++.
T Consensus        77 ~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~  156 (466)
T PLN02655         77 LTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLI  156 (466)
T ss_pred             HhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHH
Confidence            3333444666677999999999887688998888999999999999999988654   2467899999999999999999


Q ss_pred             HHhcccccCcccc-Ch---HHHHHHHHHHHHHHHHhhhhcccccccc---ccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015593           83 MIAGKRYYGKHVA-NL---EEAKRFKEVLAATFKVAAESNIGDFLPW---FKSRDLEKRMIRCRKMRDECAQYLIEERRR  155 (404)
Q Consensus        83 ~~fG~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~---l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  155 (404)
                      ++||.++...... ..   .....+...+..++.......+.+++|+   ++...+.+...+......+++..+++++++
T Consensus       157 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  236 (466)
T PLN02655        157 QALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKK  236 (466)
T ss_pred             HHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999986432111 00   0112233444444433322223345553   332223233333444456677777776665


Q ss_pred             hccCCCCCCCCccchhhHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhH
Q 015593          156 NRRIPSNCSGDEKTIETLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDN  235 (404)
Q Consensus       156 ~~~~~~~~~~~~~~~~d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~  235 (404)
                      +...     ....  .|+++.|++..    ..++++++.++++++++||+|||+++++|++++|++||++|+|+++||++
T Consensus       237 ~~~~-----~~~~--~d~l~~ll~~~----~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~  305 (466)
T PLN02655        237 RIAR-----GEER--DCYLDFLLSEA----THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIRE  305 (466)
T ss_pred             hhcC-----CCCc--ccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence            4221     1234  68999999764    24899999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCc
Q 015593          236 QVGHGRLMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKP  315 (404)
Q Consensus       236 ~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P  315 (404)
                      +++.+. ++.++++++|||+|||+|+||++|+++...+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|
T Consensus       306 ~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P  384 (466)
T PLN02655        306 VCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDP  384 (466)
T ss_pred             HhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCc
Confidence            998754 9999999999999999999999999999778999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCC-CCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeecC
Q 015593          316 ERFQGHQGA-RDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLPR  394 (404)
Q Consensus       316 ~R~l~~~~~-~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  394 (404)
                      +||++.+.. .....++|||+|+|.|+|++||..|++++++.||++|+|++.++.. ......+++..++.++.|.+.+|
T Consensus       385 eR~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r  463 (466)
T PLN02655        385 ERFLGEKYESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQKLHPLHAHLKPR  463 (466)
T ss_pred             cccCCCCcccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEeecCCcEEEEeec
Confidence            999975432 3447899999999999999999999999999999999999976653 22344566676778999999999


Q ss_pred             Ccc
Q 015593          395 PTM  397 (404)
Q Consensus       395 ~~~  397 (404)
                      .++
T Consensus       464 ~~~  466 (466)
T PLN02655        464 GSM  466 (466)
T ss_pred             CCC
Confidence            764


No 18 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=3.2e-64  Score=483.74  Aligned_cols=366  Identities=19%  Similarity=0.358  Sum_probs=280.6

Q ss_pred             CCeeeEEecCChhHHHHHhhhhhhcCChhHHhH--hhhHHHHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHHHHh
Q 015593            9 NFTSLAWAPYGDHWRNLRRVASLEILSSSRLQL--LSNIRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRMIA   85 (404)
Q Consensus         9 ~~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~--~~~~~~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~f   85 (404)
                      .|+++++++ |+.||++||+++ |+|+.+.+..  +.+.+.+.+..+++.+.+. .+++++|+.+.+.++++|++++++|
T Consensus       115 ~g~gl~~~~-g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~f  192 (500)
T PLN02169        115 LGEGILTVD-FELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSILMT  192 (500)
T ss_pred             hcCcccccC-cHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhhee
Confidence            346676664 999999999998 8999987764  2366777788888888654 4567899999999999999999999


Q ss_pred             cccccCccccChHHHHHHHHHHHHHHHHhhhhccccccc--------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015593           86 GKRYYGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLP--------WFKSRDLEKRMIRCRKMRDECAQYLIEERRRNR  157 (404)
Q Consensus        86 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P--------~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  157 (404)
                      |.+........  ....+.+.+........   ...+.|        |++ ....++..++.+.+.+++.++|+++++..
T Consensus       193 G~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~I~~r~~~~  266 (500)
T PLN02169        193 GYDPMSLSIEM--LEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIG-IGLERKMRTALATVNRMFAKIISSRRKEE  266 (500)
T ss_pred             CCCccccCCCC--CCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhC-CchhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99764321110  00122222222111110   011122        221 12235667788889999999998876542


Q ss_pred             cCCCCCCCCccchhhHHHHHHHhcccC---CCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHh
Q 015593          158 RIPSNCSGDEKTIETLIEVLLALQETD---PECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREID  234 (404)
Q Consensus       158 ~~~~~~~~~~~~~~d~l~~Ll~~~~~~---~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~  234 (404)
                      .... ...+..  .|+++.+++..+.+   +..+++++|.+++.++++||+|||+++++|++++|+.||++|+|+++||+
T Consensus       267 ~~~~-~~~~~~--~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~  343 (500)
T PLN02169        267 ISRA-ETEPYS--KDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEIN  343 (500)
T ss_pred             hccc-cccCCC--cCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence            1111 011123  68999998764321   12478889999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCc-ccccceEeCCCCEEEEechhhhcCCCCC-CCCCC
Q 015593          235 NQVGHGRLMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDE-CTVLGYSIPRGTTLLVNIWAIQNDPKIW-EDPRK  312 (404)
Q Consensus       235 ~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~-~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~-~~p~~  312 (404)
                      +++      +++++++||||+|||+|+||++|++|... |.+.+| +.++||.|||||.|.++.|++||||++| +||++
T Consensus       344 ~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~  416 (500)
T PLN02169        344 TKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALD  416 (500)
T ss_pred             hhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhh
Confidence            764      67899999999999999999999999964 555555 5559999999999999999999999999 89999


Q ss_pred             CCcCccCCCCCC---CCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCcee
Q 015593          313 FKPERFQGHQGA---RDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQA  389 (404)
Q Consensus       313 F~P~R~l~~~~~---~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (404)
                      |+||||+++++.   ..++.|+|||+|+|+|+|++||+.|++++++.|+++|+|+++++..+  .....+++.++.++.+
T Consensus       417 F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~--~~~~~~~l~~~~gl~l  494 (500)
T PLN02169        417 FKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKI--EAIPSILLRMKHGLKV  494 (500)
T ss_pred             cCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCc--ccccceEEecCCCEEE
Confidence            999999975433   23678999999999999999999999999999999999999766543  3344567777889999


Q ss_pred             eeecC
Q 015593          390 KCLPR  394 (404)
Q Consensus       390 ~~~~r  394 (404)
                      ++.+|
T Consensus       495 ~l~~~  499 (500)
T PLN02169        495 TVTKK  499 (500)
T ss_pred             EEEeC
Confidence            99887


No 19 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=5.1e-64  Score=486.77  Aligned_cols=366  Identities=21%  Similarity=0.341  Sum_probs=290.5

Q ss_pred             eeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh-c-CCCcchhhHHHHHHHHHHHHHHHhccc
Q 015593           11 TSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-Q-LIESVDLRMEIYDLTMNVMMRMIAGKR   88 (404)
Q Consensus        11 ~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~-~-~~~~vd~~~~~~~~~~~vi~~~~fG~~   88 (404)
                      .++++ .+|+.|+++||+++ +.|+.++++.+.+.+.++++.+++.+.+. + +++++|+.+++..+++|++++++||.+
T Consensus       142 ~~l~~-~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~  219 (516)
T PLN02290        142 RGLLM-ANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEVEIGEYMTRLTADIISRTEFDSS  219 (516)
T ss_pred             CCccc-cCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEhHHHHHHHHHHHHHHHHcCCc
Confidence            45544 56999999999998 79999999999999999999999999765 2 335899999999999999999999988


Q ss_pred             ccCccccChHHHHHHHHHHHHHHHHhhhhcccccccccc-c-hhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 015593           89 YYGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLPWFK-S-RDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCSGD  166 (404)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  166 (404)
                      +...    ..    +.+.+..+............+|+++ . ....++.....+.+.+++.+.++++++..+...  ...
T Consensus       220 ~~~~----~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~  289 (516)
T PLN02290        220 YEKG----KQ----IFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLLMEIIQSRRDCVEIGR--SSS  289 (516)
T ss_pred             cccc----hH----HHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--CCC
Confidence            6432    11    1122222221111111111234321 1 122244556667788888888888765422111  112


Q ss_pred             ccchhhHHHHHHHhccc---CCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcCCCCC
Q 015593          167 EKTIETLIEVLLALQET---DPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGHGRLM  243 (404)
Q Consensus       167 ~~~~~d~l~~Ll~~~~~---~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~  243 (404)
                      ..  .|+++.+++..++   ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+++++|.+ .+
T Consensus       290 ~~--~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~  366 (516)
T PLN02290        290 YG--DDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TP  366 (516)
T ss_pred             CC--CCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CC
Confidence            34  6899999975432   223488999999999999999999999999999999999999999999999999864 78


Q ss_pred             ChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCC-CCCCCCCcCccCCCC
Q 015593          244 DESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIW-EDPRKFKPERFQGHQ  322 (404)
Q Consensus       244 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~  322 (404)
                      +++++++||||+|||+|++|++|+++. ++|.+.+|++++||.|||||.|.++.|++||||++| +||++|+||||++..
T Consensus       367 ~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~  445 (516)
T PLN02290        367 SVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRP  445 (516)
T ss_pred             CHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCC
Confidence            999999999999999999999999997 699999999999999999999999999999999999 899999999999632


Q ss_pred             CCCCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeecCC
Q 015593          323 GARDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLPRP  395 (404)
Q Consensus       323 ~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  395 (404)
                       ......|+|||.|+|.|+|++||++|++++++.|+++|+|+++++...  .....++..|..++.|++.+|+
T Consensus       446 -~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        446 -FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRH--APVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             -CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCccc--CccceeeecCCCCCeEEEEeCC
Confidence             123457999999999999999999999999999999999998776431  2223567777788999999986


No 20 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.6e-63  Score=481.53  Aligned_cols=374  Identities=20%  Similarity=0.312  Sum_probs=282.3

Q ss_pred             eeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHH-HHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHHHHhccc
Q 015593           11 TSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIR-ADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRMIAGKR   88 (404)
Q Consensus        11 ~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~-~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~fG~~   88 (404)
                      .++ ++.+|+.|+++||+++ +.|+.++++++.+.+ .+.++.+++.+.+. .+++++|+.+++..+++|+++.++||.+
T Consensus       113 ~~l-~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~  190 (516)
T PLN03195        113 DGI-FNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGFGVE  190 (516)
T ss_pred             Cee-eccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHhCCC
Confidence            444 4567999999999998 789999999999976 66677777777653 4456899999999999999999999998


Q ss_pred             ccCccccChHHHHHHHHHHHHHHHHhhhhccccccc----cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 015593           89 YYGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLP----WFKSRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCS  164 (404)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P----~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  164 (404)
                      +.........  ..+.+.+......... .....++    |++. ...+...+..+.+.+++.+++++++++........
T Consensus       191 ~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  266 (516)
T PLN03195        191 IGTLSPSLPE--NPFAQAFDTANIIVTL-RFIDPLWKLKKFLNI-GSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKSG  266 (516)
T ss_pred             ccccccCCCc--cHHHHHHHHHHHHHHH-HHhcchhhHHHhccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            7432211000  1222222222211110 0000011    1111 11134455667788888888887765422110001


Q ss_pred             CCccchhhHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcC-----
Q 015593          165 GDEKTIETLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGH-----  239 (404)
Q Consensus       165 ~~~~~~~d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~-----  239 (404)
                      ....  .|+++.|++..++++..++++++.++++++++||+|||+++++|++|+|+.||++|+||++|+++++++     
T Consensus       267 ~~~~--~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~  344 (516)
T PLN03195        267 KKVK--HDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEE  344 (516)
T ss_pred             cccc--ccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccc
Confidence            1134  689999997644334459999999999999999999999999999999999999999999999988643     


Q ss_pred             ---------------CCCCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccc-cceEeCCCCEEEEechhhhcC
Q 015593          240 ---------------GRLMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTV-LGYSIPRGTTLLVNIWAIQND  303 (404)
Q Consensus       240 ---------------~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~-~g~~Ip~Gt~v~~~~~~~~~d  303 (404)
                                     ++.++++++++||||+|||+|+||++|++|.. +|.+.+|..+ +||.|||||.|.++.|++|||
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~d  423 (516)
T PLN03195        345 DPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYSMGRM  423 (516)
T ss_pred             cccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHhhccC
Confidence                           24589999999999999999999999999996 5656666554 999999999999999999999


Q ss_pred             CCCC-CCCCCCCcCccCCCCC--CCCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCcccc
Q 015593          304 PKIW-EDPRKFKPERFQGHQG--ARDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVT  380 (404)
Q Consensus       304 ~~~~-~~p~~F~P~R~l~~~~--~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  380 (404)
                      |++| +||++|+||||++.+.  ...+..|+|||+|+|+|+|++||++|++++++.++++|++++.++.++..  ....+
T Consensus       424 p~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~  501 (516)
T PLN03195        424 EYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKY--RMMTI  501 (516)
T ss_pred             hhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCccee--eeeeE
Confidence            9999 9999999999996432  23456799999999999999999999999999999999999876654332  22345


Q ss_pred             ccCCCCceeeeecCC
Q 015593          381 MPKARPLQAKCLPRP  395 (404)
Q Consensus       381 ~~~~~~~~~~~~~r~  395 (404)
                      ..+..++.|++.+|.
T Consensus       502 ~~~~~~~~v~~~~r~  516 (516)
T PLN03195        502 LSMANGLKVTVSRRS  516 (516)
T ss_pred             EecCCCEEEEEEeCC
Confidence            556678999998874


No 21 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=9.2e-63  Score=473.03  Aligned_cols=364  Identities=21%  Similarity=0.307  Sum_probs=284.0

Q ss_pred             CeeeEEecCChhHHHHHhhhhhhcCChhHHhHhh--hHHHHHHHHHHHHHHHh---cCCCcchhhHHHHHHHHHHHHHHH
Q 015593           10 FTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLS--NIRADEVKSLVRRLFHN---QLIESVDLRMEIYDLTMNVMMRMI   84 (404)
Q Consensus        10 ~~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~--~~~~~~~~~li~~l~~~---~~~~~vd~~~~~~~~~~~vi~~~~   84 (404)
                      |++++ +.+|+.|+++||.++ +.|+.+.++.+.  +.+.+.++.+++.+.+.   .+++++|+.+++.++++|+++.++
T Consensus       120 g~gi~-~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~  197 (502)
T PLN02426        120 GRGIF-NVDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFS  197 (502)
T ss_pred             CCcee-ecCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHH
Confidence            34554 456999999999998 799999998764  57777788888887654   223679999999999999999999


Q ss_pred             hcccccCccccChHHHHHHHHHHHHHHHHhhhhcccccccc-------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015593           85 AGKRYYGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLPW-------FKSRDLEKRMIRCRKMRDECAQYLIEERRRNR  157 (404)
Q Consensus        85 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-------l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  157 (404)
                      ||.++...+...  ....+...+..+...... .....+||       ++. +..+++.++.+.+.+++.++++++++..
T Consensus       198 fG~~~~~l~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~I~~r~~~~  273 (502)
T PLN02426        198 FGLDPGCLELSL--PISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNI-GSERKLKEAIKLVDELAAEVIRQRRKLG  273 (502)
T ss_pred             hCCCCcccCCCC--CccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhccc-chhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999874332110  001233333322211110 01111222       111 1124566777888888888888876531


Q ss_pred             cCCCCCCCCccchhhHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhh
Q 015593          158 RIPSNCSGDEKTIETLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQV  237 (404)
Q Consensus       158 ~~~~~~~~~~~~~~d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~  237 (404)
                             .+..  .|+++.|++..      .+++++.++++++++||+|||+++|+|++|+|++||++|+||++|+++++
T Consensus       274 -------~~~~--~dll~~ll~~~------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~  338 (502)
T PLN02426        274 -------FSAS--KDLLSRFMASI------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVM  338 (502)
T ss_pred             -------cCCc--chHHHHHHhcC------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Confidence                   1234  79999999753      36789999999999999999999999999999999999999999999998


Q ss_pred             cCC-CCCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccc-cceEeCCCCEEEEechhhhcCCCCC-CCCCCCC
Q 015593          238 GHG-RLMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTV-LGYSIPRGTTLLVNIWAIQNDPKIW-EDPRKFK  314 (404)
Q Consensus       238 ~~~-~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~-~g~~Ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~  314 (404)
                      +.+ ..++++++++||||+|||+|++|++|++|.. .|.+.+|..+ +||.|||||.|.++.+++||||++| +||++|+
T Consensus       339 ~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~  417 (502)
T PLN02426        339 GPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFK  417 (502)
T ss_pred             CCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcC
Confidence            863 4689999999999999999999999999985 5888888777 9999999999999999999999999 9999999


Q ss_pred             cCccCCCCC--CCCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeee
Q 015593          315 PERFQGHQG--ARDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCL  392 (404)
Q Consensus       315 P~R~l~~~~--~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (404)
                      ||||+++..  ...+..++|||+|+|.|+|++||++|++++++.++++|+++++++.........+++..++.++.|+++
T Consensus       418 PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~  497 (502)
T PLN02426        418 PERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVR  497 (502)
T ss_pred             ccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEE
Confidence            999997422  134567999999999999999999999999999999999998654321223334567777888999999


Q ss_pred             cCC
Q 015593          393 PRP  395 (404)
Q Consensus       393 ~r~  395 (404)
                      +|.
T Consensus       498 ~r~  500 (502)
T PLN02426        498 ERV  500 (502)
T ss_pred             Ecc
Confidence            884


No 22 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=4.6e-63  Score=475.40  Aligned_cols=369  Identities=32%  Similarity=0.608  Sum_probs=295.4

Q ss_pred             CeeeEEecCChhHHHHHhhhhhhcCChh-HHhHhhhHHHHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHHHHhcc
Q 015593           10 FTSLAWAPYGDHWRNLRRVASLEILSSS-RLQLLSNIRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRMIAGK   87 (404)
Q Consensus        10 ~~~~~~~~~g~~w~~~Rr~~~~~~~s~~-~~~~~~~~~~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~fG~   87 (404)
                      +.++++.. |+.|+++|+++. +.|+.. .+ ++.+.+.+.++.+++.+.+. ...+.+|+.+++..+++|++++++||.
T Consensus        84 ~~~l~~~~-~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~fG~  160 (463)
T PF00067_consen   84 GKGLFFSD-GERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLFGK  160 (463)
T ss_dssp             TTSSTTSS-HHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccc-cccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeecccccccccccccccccc
Confidence            34555554 799999999998 677877 66 89999999999999999887 333479999999999999999999999


Q ss_pred             cccCccccChHHHHHHHHHHHHHHHHhhh--hcccccccccc--chhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 015593           88 RYYGKHVANLEEAKRFKEVLAATFKVAAE--SNIGDFLPWFK--SRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNC  163 (404)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  163 (404)
                      ++.....   .....+.+.+..+......  ..+...+||+.  .....+...++.+.+.+++..+++++++.....   
T Consensus       161 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---  234 (463)
T PF00067_consen  161 DFGSLDD---EDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDG---  234 (463)
T ss_dssp             HHHGTTH---HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS---
T ss_pred             eeeeccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---
Confidence            8752221   2223444444444333211  12334455442  122335566677888889999999888764321   


Q ss_pred             CCCccchhhHHHHHHHhc-ccCC-CCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcCCC
Q 015593          164 SGDEKTIETLIEVLLALQ-ETDP-ECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGHGR  241 (404)
Q Consensus       164 ~~~~~~~~d~l~~Ll~~~-~~~~-~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~  241 (404)
                       ....  .|+++.|+... +.++ ..++.+++.++++++++||+|||+++++|++++|+.||++|+||++||+++.+++.
T Consensus       235 -~~~~--~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  311 (463)
T PF00067_consen  235 -DESR--RDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGR  311 (463)
T ss_dssp             -SSSC--SSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSS
T ss_pred             -cccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence             1234  79999999886 3333 37999999999999999999999999999999999999999999999999998777


Q ss_pred             CCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCC
Q 015593          242 LMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGH  321 (404)
Q Consensus       242 ~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  321 (404)
                      .++.+++++||||+|||+|++|++|+++.+++|.+.+|++++||.|||||.|.++.+++|+||++|+||++|+|+||++.
T Consensus       312 ~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~  391 (463)
T PF00067_consen  312 EITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDE  391 (463)
T ss_dssp             SHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            89999999999999999999999999996678999999999999999999999999999999999999999999999997


Q ss_pred             CC--CCCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCc-cccccCCCCceeee
Q 015593          322 QG--ARDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGT-GVTMPKARPLQAKC  391 (404)
Q Consensus       322 ~~--~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  391 (404)
                      ++  ......|+|||.|+|.|+|++||+.|++++++.||++||++++++......... +++.++ .++.|+|
T Consensus       392 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  463 (463)
T PF00067_consen  392 RGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPP-KPLKVKF  463 (463)
T ss_dssp             TSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEE-SSSEEEE
T ss_pred             ccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeC-CCcEEeC
Confidence            65  366788999999999999999999999999999999999999776543333222 454444 5677765


No 23 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.4e-61  Score=464.88  Aligned_cols=351  Identities=20%  Similarity=0.285  Sum_probs=273.2

Q ss_pred             eeEEecCChhHHHHHhhhhhhcCChhHHhH-hhhHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHhccccc
Q 015593           12 SLAWAPYGDHWRNLRRVASLEILSSSRLQL-LSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAGKRYY   90 (404)
Q Consensus        12 ~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~-~~~~~~~~~~~li~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~   90 (404)
                      ++++. +|+.||++||+++ +.|++..++. +.+.+.+.+..+++.+.   .++.+|+.+.+..+++|++++++||.+..
T Consensus       124 ~~~~~-~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~vd~~~~~~~~~~~vi~~~~fg~~~~  198 (490)
T PLN02500        124 SMLVL-VGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWK---ENSTFSAQDEAKKFTFNLMAKHIMSMDPG  198 (490)
T ss_pred             ccccc-CCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhC---CCCCEEehHHHHHHHHHHHHHHHhCCCCC
Confidence            45554 6999999999998 7899988887 56777777777777663   24579999999999999999999998753


Q ss_pred             CccccChHHHHHHHHHHHHHHHHhhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccch
Q 015593           91 GKHVANLEEAKRFKEVLAATFKVAAESNIGDFLPWFKSRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCSGDEKTI  170 (404)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  170 (404)
                      +.      ....+...+..+......  ....+|+..   . ++..++.+.+.+++.++++++++..+..+  .....  
T Consensus       199 ~~------~~~~~~~~~~~~~~~~~~--~~~~~p~~~---~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~--  262 (490)
T PLN02500        199 EE------ETEQLKKEYVTFMKGVVS--APLNFPGTA---Y-RKALKSRATILKFIERKMEERIEKLKEED--ESVEE--  262 (490)
T ss_pred             ch------HHHHHHHHHHHHHhhhhc--chhcCCCcc---c-HHHHHHHHHHHHHHHHHHHHHHHhhhccc--CCCCc--
Confidence            21      112222222222221111  111234322   1 34445667888888888888765432111  11134  


Q ss_pred             hhHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhc-----CCCCCCh
Q 015593          171 ETLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVG-----HGRLMDE  245 (404)
Q Consensus       171 ~d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~-----~~~~~~~  245 (404)
                      .|+++.|++.     ..++++++++++.++++||+|||+++++|++++|+.||++|+|+++|++++++     .+..+++
T Consensus       263 ~d~l~~ll~~-----~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~  337 (490)
T PLN02500        263 DDLLGWVLKH-----SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNW  337 (490)
T ss_pred             chHHHHHHhc-----cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCH
Confidence            6899999974     23899999999999999999999999999999999999999999999999874     2346899


Q ss_pred             hhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCCCC-
Q 015593          246 SDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQGA-  324 (404)
Q Consensus       246 ~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~-  324 (404)
                      +|+++|||++|||+|++|++|++|. .+|.+.+|++++||.|||||.|+++.|++||||++|+||++|+||||+++++. 
T Consensus       338 ~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~  416 (490)
T PLN02500        338 EDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRG  416 (490)
T ss_pred             HHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCccc
Confidence            9999999999999999999999998 58999999999999999999999999999999999999999999999975322 


Q ss_pred             -------CCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeec
Q 015593          325 -------RDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLP  393 (404)
Q Consensus       325 -------~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (404)
                             ..+..|+|||.|+|.|+|++||+.|++++++.|+++|+|++.++... .. .. .+.++ .++.|++.+
T Consensus       417 ~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~-~~-~~-~~~~~-~~l~~~~~~  488 (490)
T PLN02500        417 GSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA-FA-FP-FVDFP-KGLPIRVRR  488 (490)
T ss_pred             ccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc-ee-cc-cccCC-CCceEEEEe
Confidence                   13568999999999999999999999999999999999999776542 11 12 22333 477777654


No 24 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=3.3e-61  Score=462.77  Aligned_cols=368  Identities=24%  Similarity=0.407  Sum_probs=288.1

Q ss_pred             eeeEEecCChhHHHHHhhhhhhcCChhHHhHhhh-HHHHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHHHHhccc
Q 015593           11 TSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSN-IRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRMIAGKR   88 (404)
Q Consensus        11 ~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~-~~~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~fG~~   88 (404)
                      .++++ .+|+.|+++||+++ +.|+.+.+..+.+ .+.++++.+++.+.+. .+++++|+.+++..+++|+++.++||.+
T Consensus        97 ~~i~~-~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~fG~~  174 (489)
T PLN02936         97 SGFAI-AEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVFNYN  174 (489)
T ss_pred             Ccccc-CCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHcCCC
Confidence            44444 56999999999998 7999988888765 7888999999999775 4567899999999999999999999999


Q ss_pred             ccCccccChHHHHHHHHHHHHHHHHhhhhcccccccccc------chhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015593           89 YYGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLPWFK------SRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSN  162 (404)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  162 (404)
                      +...... .+....+...+.....     ....++|++.      .....++..++.+.+.+++.++++++++.......
T Consensus       175 ~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~  248 (489)
T PLN02936        175 FDSLTTD-SPVIQAVYTALKEAET-----RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGE  248 (489)
T ss_pred             ccccccC-cHHHHHHHHHHHHHHH-----hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            8543211 1222233222222111     1112333221      11122455666777788888888776643221110


Q ss_pred             ----CC--CCccchhhHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHh
Q 015593          163 ----CS--GDEKTIETLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQ  236 (404)
Q Consensus       163 ----~~--~~~~~~~d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~  236 (404)
                          ..  ++..  .++++.|++..+    .++.++|.++++++++||+|||+++++|++|+|++||++|+|+++|++++
T Consensus       249 ~~~~~~~~~~~~--~d~l~~ll~~~~----~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~  322 (489)
T PLN02936        249 VIEGEEYVNDSD--PSVLRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRV  322 (489)
T ss_pred             ccccccccccCc--hHHHHHHHhccc----cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence                00  1234  789999997532    38999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCChhhccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcC
Q 015593          237 VGHGRLMDESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPE  316 (404)
Q Consensus       237 ~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~  316 (404)
                      ++. ..++++++++||||+|||+|++|++|+++.+.+|.+..|+.++||.|||||.|+++.+++||||++|+||++|+||
T Consensus       323 ~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~Pe  401 (489)
T PLN02936        323 LQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPE  401 (489)
T ss_pred             hcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCcc
Confidence            985 4579999999999999999999999999998878778888889999999999999999999999999999999999


Q ss_pred             ccCCCCCC----CCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeee
Q 015593          317 RFQGHQGA----RDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCL  392 (404)
Q Consensus       317 R~l~~~~~----~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (404)
                      ||+++++.    ..+..|+|||.|+|.|+|++||++|++++++.|+++|++++++++++..  ..++++.++.++.|+++
T Consensus       402 Rwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~  479 (489)
T PLN02936        402 RFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVM--TTGATIHTTNGLYMTVS  479 (489)
T ss_pred             ccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccce--ecceEEeeCCCeEEEEE
Confidence            99964321    2345899999999999999999999999999999999999988765422  23455556678999999


Q ss_pred             cCC
Q 015593          393 PRP  395 (404)
Q Consensus       393 ~r~  395 (404)
                      +|.
T Consensus       480 ~R~  482 (489)
T PLN02936        480 RRR  482 (489)
T ss_pred             eee
Confidence            884


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.7e-59  Score=447.46  Aligned_cols=353  Identities=21%  Similarity=0.271  Sum_probs=274.9

Q ss_pred             EEecCChhHHHHHhhhhhhcCChhHHhH-hhhHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHhcccccCc
Q 015593           14 AWAPYGDHWRNLRRVASLEILSSSRLQL-LSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAGKRYYGK   92 (404)
Q Consensus        14 ~~~~~g~~w~~~Rr~~~~~~~s~~~~~~-~~~~~~~~~~~li~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~   92 (404)
                      ++..+|+.||++|+++. +.|+...+.. +.+.+.+.+..+++.+   ..++++|+.+.+..++++++++++||.+..+.
T Consensus        94 ~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~vi~~~~~G~~~~~~  169 (452)
T PLN03141         94 ILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSW---RDDPPVLVQDETKKIAFEVLVKALISLEPGEE  169 (452)
T ss_pred             ccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhc---cCCCCEEhHHHHHHHHHHHHHHHHcCCCchHH
Confidence            44456999999999998 6788777765 3455666666665554   23468999999999999999999999764221


Q ss_pred             cccChHHHHHHHHHHHHHHHHhhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccchhh
Q 015593           93 HVANLEEAKRFKEVLAATFKVAAESNIGDFLPWFKSRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCSGDEKTIET  172 (404)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d  172 (404)
                             ...+...+..+......  +..++|+.   .. ++..++.+.+.+++..++++++..............  .|
T Consensus       170 -------~~~~~~~~~~~~~~~~~--~~~~~p~~---~~-~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~d  234 (452)
T PLN03141        170 -------MEFLKKEFQEFIKGLMS--LPIKLPGT---RL-YRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIP--KD  234 (452)
T ss_pred             -------HHHHHHHHHHHhhhHHh--CccCCCch---Hh-HHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCCh--hh
Confidence                   12233333332222111  11122321   22 334456788888888888887655321110000123  68


Q ss_pred             HHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhc----CCCCCChhhc
Q 015593          173 LIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVG----HGRLMDESDM  248 (404)
Q Consensus       173 ~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~----~~~~~~~~~~  248 (404)
                      +++.|++..   +..+++++|+++++++++||+|||+++++|++++|+.||++|+|+++|++++++    .+..++.+++
T Consensus       235 ~l~~ll~~~---~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~  311 (452)
T PLN03141        235 VVDVLLRDG---SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDY  311 (452)
T ss_pred             HHHHHHhcC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHH
Confidence            999999753   235899999999999999999999999999999999999999999999998864    2456899999


Q ss_pred             cCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCCCCCCCC
Q 015593          249 ARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQGARDGF  328 (404)
Q Consensus       249 ~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~  328 (404)
                      .+||||+|||+|++|++|+++. ++|.+.+|++++||.||||+.|+++++++||||++|+||++|+||||++.+  ..+.
T Consensus       312 ~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~--~~~~  388 (452)
T PLN03141        312 MSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKD--MNNS  388 (452)
T ss_pred             hccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCC--CCCC
Confidence            9999999999999999999986 689999999999999999999999999999999999999999999999752  2456


Q ss_pred             cccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeecCCc
Q 015593          329 RMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLPRPT  396 (404)
Q Consensus       329 ~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  396 (404)
                      .|+|||+|+|.|+|++||+.|+++++|.|+++|+|++.++..+ .    ..++.+..++.|++.+|++
T Consensus       389 ~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        389 SFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV-N----FPTVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee-e----cccccCCCCceEEEEeCCC
Confidence            8999999999999999999999999999999999998665432 1    2366677789999999975


No 26 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.2e-59  Score=449.61  Aligned_cols=346  Identities=21%  Similarity=0.326  Sum_probs=273.7

Q ss_pred             eeEEecCChhHHHHHhhhhhhcCChhHHhH-hhhHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHhccccc
Q 015593           12 SLAWAPYGDHWRNLRRVASLEILSSSRLQL-LSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAGKRYY   90 (404)
Q Consensus        12 ~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~-~~~~~~~~~~~li~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~   90 (404)
                      +++ +.+|+.|+++|++++ ++|++..++. +.+.+.+.+.++++.+..   ++++|+.+.+..+++++++.++||....
T Consensus       112 ~~~-~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~g~~~~  186 (463)
T PLN02774        112 NIA-AVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDG---LKTIDIQEKTKEMALLSALKQIAGTLSK  186 (463)
T ss_pred             chh-hcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCC---CCCEEeeHHHHHHHHHHHHHHHcCCCCh
Confidence            344 457999999999997 7899999886 788888888888877642   3579999999999999999999997542


Q ss_pred             CccccChHHHHHHHHHHHHHHHHhhhhccccccc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccc
Q 015593           91 GKHVANLEEAKRFKEVLAATFKVAAESNIGDFLP-WFKSRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCSGDEKT  169 (404)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  169 (404)
                      ..       ...+.+.+..+...  ..    .+| |++.... ++..++.+.+.+++.+.++++++.        .... 
T Consensus       187 ~~-------~~~~~~~~~~~~~~--~~----~~~~~lp~~~~-~~~~~~~~~~~~~~~~~i~~r~~~--------~~~~-  243 (463)
T PLN02774        187 PI-------SEEFKTEFFKLVLG--TL----SLPIDLPGTNY-RSGVQARKNIVRMLRQLIQERRAS--------GETH-  243 (463)
T ss_pred             HH-------HHHHHHHHHHHhcc--cc----cCCcCCCChhh-hHHHHHHHHHHHHHHHHHHHHHhc--------CCCc-
Confidence            11       12222222221110  11    122 2332222 445567778888888888876543        1134 


Q ss_pred             hhhHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcC---CCCCChh
Q 015593          170 IETLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGH---GRLMDES  246 (404)
Q Consensus       170 ~~d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~---~~~~~~~  246 (404)
                       .|+++.|+.... ++..+++++|.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+.   +..++++
T Consensus       244 -~d~l~~ll~~~~-~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~  321 (463)
T PLN02774        244 -TDMLGYLMRKEG-NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWN  321 (463)
T ss_pred             -ccHHHHHHhCcc-CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHH
Confidence             699999997432 22348999999999999999999999999999999999999999999999999864   3568999


Q ss_pred             hccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCCCCCC
Q 015593          247 DMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQGARD  326 (404)
Q Consensus       247 ~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~  326 (404)
                      +++++|||+|||+|++|++|+++. .+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++... 
T Consensus       322 ~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~-  399 (463)
T PLN02774        322 DYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLES-  399 (463)
T ss_pred             HHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcCC-
Confidence            999999999999999999999997 579999999999999999999999999999999999999999999999753222 


Q ss_pred             CCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeec
Q 015593          327 GFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLP  393 (404)
Q Consensus       327 ~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (404)
                      ...|+|||+|+|.|+|++||.+|++++++.|+++|+|++.++.++  .....+  .++.++.+++++
T Consensus       400 ~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~--~~~~~~--~p~~g~~~~~~~  462 (463)
T PLN02774        400 HNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKL--MKFPRV--EAPNGLHIRVSP  462 (463)
T ss_pred             CccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcc--ccCCCC--CCCCCceEEeee
Confidence            246999999999999999999999999999999999999877642  222222  245678888764


No 27 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.1e-58  Score=442.80  Aligned_cols=342  Identities=21%  Similarity=0.321  Sum_probs=274.6

Q ss_pred             eEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHhcccccCc
Q 015593           13 LAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAGKRYYGK   92 (404)
Q Consensus        13 ~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~   92 (404)
                      .++..+|+.|+++||++. +.|++++++.+.+.+.+.+..+++.|.    ++++|+.+++..+++++++.++||.+....
T Consensus       117 ~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~----~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~  191 (463)
T PLN02196        117 AIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE----GTQINTYQEMKTYTFNVALLSIFGKDEVLY  191 (463)
T ss_pred             cccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC----CCeEEeHHHHHHHHHHHHHHHHcCCCCchH
Confidence            344456999999999998 689999999999999999999988773    357999999999999999999999874211


Q ss_pred             cccChHHHHHHHHHHHHHHHHhhhhccccccccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccchh
Q 015593           93 HVANLEEAKRFKEVLAATFKVAAESNIGDFLPWF-KSRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCSGDEKTIE  171 (404)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  171 (404)
                             ...+.+.+..+.      .....+||. +.. ..++..++.+.+.+++.++++++++.        ....  .
T Consensus       192 -------~~~~~~~~~~~~------~~~~~~~~~~p~~-~~~~~~~a~~~~~~~~~~~i~~~~~~--------~~~~--~  247 (463)
T PLN02196        192 -------REDLKRCYYILE------KGYNSMPINLPGT-LFHKSMKARKELAQILAKILSKRRQN--------GSSH--N  247 (463)
T ss_pred             -------HHHHHHHHHHHh------cchhcccccCCCc-cchHHHHHHHHHHHHHHHHHHHHhhc--------CCCc--c
Confidence                   011221111111      011123432 211 12455566677888888888766543        1134  6


Q ss_pred             hHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcC---CCCCChhhc
Q 015593          172 TLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGH---GRLMDESDM  248 (404)
Q Consensus       172 d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~---~~~~~~~~~  248 (404)
                      |+++.+++.    +..++++++.++++++++||+|||+++++|++++|++||++|+|+++|++++.+.   ++.++.+++
T Consensus       248 d~l~~ll~~----~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~  323 (463)
T PLN02196        248 DLLGSFMGD----KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDT  323 (463)
T ss_pred             cHHHHHHhc----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHH
Confidence            899988853    2348999999999999999999999999999999999999999999999998864   467899999


Q ss_pred             cCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCCCCCCCC
Q 015593          249 ARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQGARDGF  328 (404)
Q Consensus       249 ~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~  328 (404)
                      +++|||+|||+|++|++|+++.. .|.+.+|+.++||.|||||.|+++.+++||||++|+||++|+||||++.   ..+.
T Consensus       324 ~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~---~~~~  399 (463)
T PLN02196        324 KKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVA---PKPN  399 (463)
T ss_pred             hcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCC---CCCC
Confidence            99999999999999999999985 5999999999999999999999999999999999999999999999963   2456


Q ss_pred             cccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeecC
Q 015593          329 RMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLPR  394 (404)
Q Consensus       329 ~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  394 (404)
                      .++|||.|+|.|+|+++|+.|++++++.|+++|+|++++++. ...+  ..+..|++.+.|++...
T Consensus       400 ~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~~--~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        400 TFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN-GIQY--GPFALPQNGLPIALSRK  462 (463)
T ss_pred             cccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC-ceEE--cccccCCCCceEEEecC
Confidence            899999999999999999999999999999999999876542 2332  33345667778877653


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=6.3e-58  Score=442.56  Aligned_cols=354  Identities=21%  Similarity=0.373  Sum_probs=279.4

Q ss_pred             EEecCChhHHHHHhhhhhhcC-ChhHHhHhhhHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHhcccccCc
Q 015593           14 AWAPYGDHWRNLRRVASLEIL-SSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAGKRYYGK   92 (404)
Q Consensus        14 ~~~~~g~~w~~~Rr~~~~~~~-s~~~~~~~~~~~~~~~~~li~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~   92 (404)
                      ++..+|+.|+++||++. +.| +++.++.+.+.+.+.+..+++.+..   ++.+|+.+.+..++++++++++||.+....
T Consensus       130 ~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~---~~~v~~~~~~~~~~~~vi~~~~~G~~~~~~  205 (490)
T PLN02302        130 FVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK---MGEIEFLTELRKLTFKIIMYIFLSSESELV  205 (490)
T ss_pred             ccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC---CCCEehHHHHHHHHHHHHHHHHcCCCChHH
Confidence            34456999999999998 567 5788999999999999999998853   346999999999999999999999865221


Q ss_pred             cccChHHHHHHHHHHHHHHHHhhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccchhh
Q 015593           93 HVANLEEAKRFKEVLAATFKVAAESNIGDFLPWFKSRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCSGDEKTIET  172 (404)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d  172 (404)
                             ...+.+.+..+......  ....+|..   .. ++..++.+.+.+++.+.++++++.....   ..+..  .|
T Consensus       206 -------~~~~~~~~~~~~~~~~~--~~~~~p~~---~~-~~~~~~~~~l~~~~~~~i~~~~~~~~~~---~~~~~--~d  267 (490)
T PLN02302        206 -------MEALEREYTTLNYGVRA--MAINLPGF---AY-HRALKARKKLVALFQSIVDERRNSRKQN---ISPRK--KD  267 (490)
T ss_pred             -------HHHHHHHHHHHHHHhhh--CCcCCCch---hh-HHHHHHHHHHHHHHHHHHHHHHHhhhcc---CCCCc--CC
Confidence                   11222222211111100  11112321   11 2334556778888888888776542211   11234  79


Q ss_pred             HHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcCC----CCCChhhc
Q 015593          173 LIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGHG----RLMDESDM  248 (404)
Q Consensus       173 ~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~----~~~~~~~~  248 (404)
                      +++.|++..++++..+++++|.++++++++||+|||+++++|++++|++||++|+|+++|++++++..    ..++++++
T Consensus       268 ~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l  347 (490)
T PLN02302        268 MLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDV  347 (490)
T ss_pred             HHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence            99999987554445689999999999999999999999999999999999999999999999998642    23789999


Q ss_pred             cCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCCCCCCCC
Q 015593          249 ARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQGARDGF  328 (404)
Q Consensus       249 ~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~  328 (404)
                      ++||||+|||+|++|++|+++. .+|.+.+|++++||.|||||.|.++.+++||||++|+||++|+|+||++..  ..+.
T Consensus       348 ~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~--~~~~  424 (490)
T PLN02302        348 RKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT--PKAG  424 (490)
T ss_pred             hcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC--CCCC
Confidence            9999999999999999999998 479999999999999999999999999999999999999999999999742  2456


Q ss_pred             cccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeecCC
Q 015593          329 RMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLPRP  395 (404)
Q Consensus       329 ~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  395 (404)
                      .++|||+|+|.|+|++||..|++++++.++++|+|++.++.. .+....  ...|..++.+++.+|.
T Consensus       425 ~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~--~~~p~~~~~~~~~~~~  488 (490)
T PLN02302        425 TFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC-KVMYLP--HPRPKDNCLARITKVA  488 (490)
T ss_pred             CccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC-cceeCC--CCCCCCCceEEEEecc
Confidence            899999999999999999999999999999999999876542 222222  2456678899998885


No 29 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=5.7e-57  Score=429.77  Aligned_cols=351  Identities=21%  Similarity=0.329  Sum_probs=272.2

Q ss_pred             eeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHhccccc
Q 015593           11 TSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAGKRYY   90 (404)
Q Consensus        11 ~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~   90 (404)
                      .+++++ +|+.|+++||++. ++++.+.++.+.   .+++.++++..... ..+++++.+.+.+++++++++++||.+..
T Consensus       115 ~~l~~~-~g~~wr~~R~~~~-~f~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~v~~~~~~~~~t~~vi~~~~fg~~~~  188 (472)
T PLN02987        115 HSLLLM-KGNLHKKMHSLTM-SFANSSIIKDHL---LLDIDRLIRFNLDS-WSSRVLLMEEAKKITFELTVKQLMSFDPG  188 (472)
T ss_pred             cccccc-CcHHHHHHHHHHH-HhcChHHHHHHH---HHHHHHHHHHHHHh-hccceehHHHHHHHHHHHHHHHHcCCCCh
Confidence            456666 6999999999986 555655555433   22233443332221 12469999999999999999999997642


Q ss_pred             CccccChHHHHHHHHHHHHHHHHhhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccch
Q 015593           91 GKHVANLEEAKRFKEVLAATFKVAAESNIGDFLPWFKSRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCSGDEKTI  170 (404)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  170 (404)
                      ..       ...+.+.+.......    ....+||+. . ..++..++.+++.+++.++++++++....    +....  
T Consensus       189 ~~-------~~~~~~~~~~~~~~~----~~~~~p~l~-~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~----~~~~~--  249 (472)
T PLN02987        189 EW-------TESLRKEYVLVIEGF----FSVPLPLFS-T-TYRRAIQARTKVAEALTLVVMKRRKEEEE----GAEKK--  249 (472)
T ss_pred             HH-------HHHHHHHHHHHHhhh----hcCCCcCCC-c-hHHHHHHHHHHHHHHHHHHHHHHHhhhhc----cCccc--
Confidence            11       112222222211111    122356652 1 22566678888899999999887654211    11234  


Q ss_pred             hhHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhc---CCCCCChhh
Q 015593          171 ETLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVG---HGRLMDESD  247 (404)
Q Consensus       171 ~d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~---~~~~~~~~~  247 (404)
                      .|+++.|++..+    .+++++|.++++++++||+|||+++++|++++|+.||++|+|+++|++++.+   .+..++.++
T Consensus       250 ~d~l~~ll~~~~----~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~  325 (472)
T PLN02987        250 KDMLAALLASDD----GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSD  325 (472)
T ss_pred             ccHHHHHHhcCC----CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHH
Confidence            699999997632    4899999999999999999999999999999999999999999999999875   235678999


Q ss_pred             ccCChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCCCC-CC
Q 015593          248 MARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQGA-RD  326 (404)
Q Consensus       248 ~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~-~~  326 (404)
                      +.+|||++||++|++|++|+++. .+|.+.+|++++||.|||||.|.++.+++|+||++|+||++|+|+||++..+. ..
T Consensus       326 l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~  404 (472)
T PLN02987        326 YKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVP  404 (472)
T ss_pred             HhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCCC
Confidence            99999999999999999999986 57999999999999999999999999999999999999999999999975332 33


Q ss_pred             CCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeecCC
Q 015593          327 GFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLPRP  395 (404)
Q Consensus       327 ~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  395 (404)
                      ...++|||+|+|.|+|++||+.|++++++.|+++|+|++.++..+..    ..++.|..++.+++++|.
T Consensus       405 ~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~----~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        405 SNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLVF----FPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             CcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCceee----cccccCCCCceEEEEecc
Confidence            46799999999999999999999999999999999999977664322    336667778999999984


No 30 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.1e-54  Score=406.64  Aligned_cols=297  Identities=27%  Similarity=0.450  Sum_probs=255.3

Q ss_pred             EEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHhcccccCcc
Q 015593           14 AWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAGKRYYGKH   93 (404)
Q Consensus        14 ~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~   93 (404)
                      ++..+|+.|+++||+++ ++|+++.++.|.+.+.+.+..+++.+ . .+ +.+++.+.+..+++++|+ .+||.+..+. 
T Consensus        91 ll~~dg~~H~r~Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~-~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~-  164 (411)
T COG2124          91 LLTLDGPEHTRLRKLLA-PAFTPRALRGYRPLIREIADRLLDDL-W-QG-GADLVLDFAAELTLRVIA-ELLGVPLEDR-  164 (411)
T ss_pred             eeecCCHHHHHHHHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-c-cC-CchhHHHHhhhhhHHHHH-HHhCCCHHHH-
Confidence            55567999999999998 79999999999999999999999999 4 33 788999999999999999 9999876333 


Q ss_pred             ccChHHHHHHHHHHHHHHHHhhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccchhhH
Q 015593           94 VANLEEAKRFKEVLAATFKVAAESNIGDFLPWFKSRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCSGDEKTIETL  173 (404)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~  173 (404)
                             ..+...........        .|.........+..++...+.+++..++++++..          +.  .|+
T Consensus       165 -------~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~~----------~~--~dl  217 (411)
T COG2124         165 -------PQLLRWSDALLLRL--------DPDLGPEEPWRRARAARRELDAYLRALIAERRAA----------PR--DDL  217 (411)
T ss_pred             -------HHHHHHHHHHHhcc--------CcccCCcccHHHHHHHHHHHHHHHHHHHHHhccC----------Cc--ccH
Confidence                   22222222212110        0322211112566678888999999999988733          45  899


Q ss_pred             HHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcCCCCCChhhccCChh
Q 015593          174 IEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGHGRLMDESDMARLPY  253 (404)
Q Consensus       174 l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~lp~  253 (404)
                      ++.|+...++++..+|++||.++++++++||+|||+++|+|++|.|++||++++++++|.+.                ||
T Consensus       218 ls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~  281 (411)
T COG2124         218 LSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PL  281 (411)
T ss_pred             HHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HH
Confidence            99999887666557999999999999999999999999999999999999999999999774                79


Q ss_pred             HHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCCCCCCCCccccc
Q 015593          254 LGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQGARDGFRMMPF  333 (404)
Q Consensus       254 l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~F  333 (404)
                      ++++|+|+||++||++. ++|.+.+|++++|+.||||+.|+++++++||||++|++|++|||+||.        ..|+||
T Consensus       282 ~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~--------~~~l~F  352 (411)
T COG2124         282 LEAVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN--------NAHLPF  352 (411)
T ss_pred             HHHHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC--------CCCcCC
Confidence            99999999999999999 899999999999999999999999999999999999999999999998        469999


Q ss_pred             CCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccC
Q 015593          334 GSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGE  368 (404)
Q Consensus       334 G~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~  368 (404)
                      |+|+|.|+|++||++|++++++.++++|++....+
T Consensus       353 G~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~  387 (411)
T COG2124         353 GGGPHRCLGAALARLELKVALAELLRRFPLLLLAE  387 (411)
T ss_pred             CCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC
Confidence            99999999999999999999999999998776555


No 31 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.1e-54  Score=380.97  Aligned_cols=359  Identities=23%  Similarity=0.379  Sum_probs=281.9

Q ss_pred             eeeEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHH-HHHhcCCCcchhhHHHHHHHHHHHHHHHhcccc
Q 015593           11 TSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRR-LFHNQLIESVDLRMEIYDLTMNVMMRMIAGKRY   89 (404)
Q Consensus        11 ~~~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~-l~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~   89 (404)
                      ++++....+...-.+.+.+. .++...+++.+.+.+.+++...++. +.  . +...|....+...++=.+++++.|...
T Consensus       113 ~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~--~-s~~~d~l~~~~~~ii~tAs~~ll~~e~  188 (486)
T KOG0684|consen  113 KGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLG--E-SGETDGLYTFCRLIIFTASRLLLGGEV  188 (486)
T ss_pred             CCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhcccc--c-ccchhHhhhhhHHHhhhhHHHhhhhhh
Confidence            34555555666667777776 5889999999999999999988888 32  2 344554445555555555555554433


Q ss_pred             -cCccccChHHHHHHHHHHHHHHHHhhhhccccccc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCc
Q 015593           90 -YGKHVANLEEAKRFKEVLAATFKVAAESNIGDFLP-WFKSRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCSGDE  167 (404)
Q Consensus        90 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  167 (404)
                       ...+       .+....+.++...  ...+-..|| |++.... ++..++++.+.+.+.+++.++++...       ..
T Consensus       189 r~~~d-------~~~a~l~~dLd~~--F~~~d~~FP~~LP~~~~-r~~~ra~~~i~k~f~~~i~~rr~s~s-------~~  251 (486)
T KOG0684|consen  189 RDQLD-------ADVAKLYHDLDQG--FQPFDFLFPYNLPIPLL-RRRDRARKKISKIFSKIILDRRASIS-------KW  251 (486)
T ss_pred             hhhhc-------chHHHHHHHHhcc--ccchHhhcccCCCcchh-hhHHHHHHHHHHHHHHHHHHHHhccc-------cc
Confidence             2211       1222333333322  122233478 8887766 44558888888888888888877621       23


Q ss_pred             cchhhHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhhcCCCC-CChh
Q 015593          168 KTIETLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQVGHGRL-MDES  246 (404)
Q Consensus       168 ~~~~d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~-~~~~  246 (404)
                      .  .|+++.+++ ...++...+++|+...++.+++||++||+.+.+|++++|++|||+++.+++|+.+++|+... .+++
T Consensus       252 ~--~dmlq~l~~-~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d  328 (486)
T KOG0684|consen  252 D--NDMLQSLME-KYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYD  328 (486)
T ss_pred             c--HHHHHHHHH-HhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHH
Confidence            4  689998888 44555679999999999999999999999999999999999999999999999999998554 8999


Q ss_pred             hccCChhHHHHHHhhcCCCCCCCccCccccCCcccccc----eEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCC
Q 015593          247 DMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVLG----YSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQ  322 (404)
Q Consensus       247 ~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g----~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~  322 (404)
                      .++++|.|+.||+|||||+||.+. +.|.+.+|.++.+    |.||+|..|.+++..+|+||++|+||+.|+|+||++++
T Consensus       329 ~L~~lplL~~~IkEtLRL~~p~~~-~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~  407 (486)
T KOG0684|consen  329 QLKDLPLLDSCIKETLRLHPPAHS-LMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDN  407 (486)
T ss_pred             HHhcchHHHHHHHHHHhcCCchhh-HHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCC
Confidence            999999999999999999999998 4699999999976    99999999999999999999999999999999999765


Q ss_pred             CC------CCCCcccccCCCCCCCCChhHHHHHHHHHHHHHhhccEEEeccCcccccccCccccccCCCCceeeeecCC
Q 015593          323 GA------RDGFRMMPFGSGRRGCPGEGLGLKMVGLALGSLIQCFEWERIGEEMVDMREGTGVTMPKARPLQAKCLPRP  395 (404)
Q Consensus       323 ~~------~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  395 (404)
                      ++      .-++.|||||+|.|.|||+.||.+|++.++..+|++||+|+.+|.-+...+. ..++.|..++.++.+.|+
T Consensus       408 ~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s-~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  408 GESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYS-RMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             cccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHH-HhhcCCCCCceEEEeecC
Confidence            43      1234579999999999999999999999999999999999999743333333 447778889999999886


No 32 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3.8e-51  Score=387.22  Aligned_cols=324  Identities=15%  Similarity=0.199  Sum_probs=234.2

Q ss_pred             eEEecCChhHHHHHhhhhhhcCChhHHhHhhhHHHHHHHHHHHHHHHh-cCCCcchhhHHHHHHHHHHHHHHHhcccccC
Q 015593           13 LAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRMIAGKRYYG   91 (404)
Q Consensus        13 ~~~~~~g~~w~~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~li~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~   91 (404)
                      .++..+|+.|+++||++. ++|++ .++.|.+.+.+.+..+++.|... ..++++|+.+.++.+++|++++++||.+...
T Consensus       117 s~~~~~g~~H~r~Rrll~-~~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vdv~~~~~~lt~~vi~~~lfG~~~~~  194 (480)
T PLN02648        117 SYLDPSEPKHAKLKSFLF-ELLKS-RHRRFIPEFRAAFAELFDTWEAELAKKGKAEFNDPLDQMAFNFLCKALTGKDPSE  194 (480)
T ss_pred             eecCCCCchHHHHHHHHH-HHHHH-hhhhhhhHHHHHHHHHHHHHHHHHhhCCCccccchHHHHHHHHHHHHHcCCCcch
Confidence            455667999999999998 78985 77889999999999999999654 3455799999999999999999999986533


Q ss_pred             ccccChHHHHHHHHHHHHHHHHhhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCcc---
Q 015593           92 KHVANLEEAKRFKEVLAATFKVAAESNIGDFLPWFKSRDLEKRMIRCRKMRDECAQYLIEERRRNRRIPSNCSGDEK---  168 (404)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---  168 (404)
                      .     .....+......++...........+|                   ..++.++.++.....   .......   
T Consensus       195 ~-----~l~~~~~~~~~~~~~~~~~p~~~~~l~-------------------~~~~~~i~~~~~~~~---~~~~~~~~~~  247 (480)
T PLN02648        195 T-----ALGSDGPALIQKWLALQLAPLASTGLP-------------------HVLEELLLHTFPLPF---FLVKSDYDKL  247 (480)
T ss_pred             h-----hhccchhHHHHHHHHHHhhHHHHcCch-------------------HHHHHHhhcccCCch---hhhhccHHHH
Confidence            1     111112222222111000000000011                   000110000000000   0000000   


Q ss_pred             --chhhHHHHHHHhcccCCCCCChHHHHHHHHH-HhhccccchhhHHHHHHHHHhcChH-HHHHHHHHHhHhhcC-CCCC
Q 015593          169 --TIETLIEVLLALQETDPECYNDQTIGSLMLV-LIGGGTDTTTNTMEWALSLLLNHPE-ILKNAQREIDNQVGH-GRLM  243 (404)
Q Consensus       169 --~~~d~l~~Ll~~~~~~~~~ls~~~i~~~~~~-~~~AG~~Tta~~l~~~l~~L~~~P~-~q~kl~~Ei~~~~~~-~~~~  243 (404)
                        -+.+.+..+++...+  ..++++++.++++. +.++|++||+++++|++|+|++||+ +|+||++|++++++. +..+
T Consensus       248 ~~~~~~~~~~ll~~~~~--~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~  325 (480)
T PLN02648        248 YDFFRASATEALDLAEK--FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGV  325 (480)
T ss_pred             HHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCC
Confidence              001122244433222  23999999999875 4467778888899999999999995 999999999999874 4578


Q ss_pred             ChhhccCChhHHHHHHhhcCCCCCCCccCccccCCccccc----ceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccC
Q 015593          244 DESDMARLPYLGSIINETLRMYPPAPMLMPHESSDECTVL----GYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQ  319 (404)
Q Consensus       244 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~----g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l  319 (404)
                      +.+++++||||++||+|++|++|+++.. .|.+.+|++++    ||.||||+.|+++.+.+||||++|+||++|||+||+
T Consensus       326 t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~  404 (480)
T PLN02648        326 TFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFM  404 (480)
T ss_pred             CHHHHhcCHHHHHHHHHHHhhcCCcccc-cceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCC
Confidence            9999999999999999999999999985 57789999996    799999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccccc---------CCCCCCCCChhHHHHHHHHHHHHHhhccE-EEeccCc
Q 015593          320 GHQGARDGFRMMPF---------GSGRRGCPGEGLGLKMVGLALGSLIQCFE-WERIGEE  369 (404)
Q Consensus       320 ~~~~~~~~~~~~~F---------G~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~  369 (404)
                      ++.+. ....+++|         |+|+|.|+|++||+.|++++++.|+++|+ |++.++.
T Consensus       405 ~~~~~-~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        405 GEEGE-KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             CCCcc-ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence            74322 12234444         67789999999999999999999999998 9986655


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=72.43  E-value=15  Score=22.69  Aligned_cols=43  Identities=21%  Similarity=0.167  Sum_probs=32.8

Q ss_pred             HHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHh
Q 015593          192 TIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREID  234 (404)
Q Consensus       192 ~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~  234 (404)
                      ++...+..++-.|.|-.+-.+..-+....-||+....+-.|++
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            4556666677777777777777777777779999988888763


No 34 
>KOG4189 consensus Uncharacterized conserved protein [Function unknown]
Probab=64.87  E-value=48  Score=27.27  Aligned_cols=66  Identities=12%  Similarity=0.048  Sum_probs=47.6

Q ss_pred             hHHHHHHHhcccCCCCCChHHHHHHHHHHhhccccchh--hHHHHHHHHHhcChHHHHHHHHHHhHhh
Q 015593          172 TLIEVLLALQETDPECYNDQTIGSLMLVLIGGGTDTTT--NTMEWALSLLLNHPEILKNAQREIDNQV  237 (404)
Q Consensus       172 d~l~~Ll~~~~~~~~~ls~~~i~~~~~~~~~AG~~Tta--~~l~~~l~~L~~~P~~q~kl~~Ei~~~~  237 (404)
                      +|+-.++.........-+..++.-.+.+=.+|-+++-+  ++..-++|.|...|+...+|+++++++-
T Consensus       112 efV~efl~~i~as~nD~s~~diakesYd~~lakhHsW~IRtAV~~amYtLPTR~~lL~~Lk~d~~~~~  179 (209)
T KOG4189|consen  112 EFVIEFLDQIFASTNDESLKDIAKESYDKTLAKHHSWAIRTAVAAAMYTLPTRPELLCRLKEDMDAAN  179 (209)
T ss_pred             HHHHHHHHHHHcCCCcchhhHHHHHHHHHhhhccccHHHHHHHHHHHHhCCCcHHHHHHHHhHHHHHH
Confidence            55555554422211124566788888888888888865  4667899999999999999999997653


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=58.77  E-value=9.3  Score=24.50  Aligned_cols=24  Identities=17%  Similarity=0.347  Sum_probs=18.2

Q ss_pred             HHHHHHhcChHHHHHHHHHHhHhh
Q 015593          214 WALSLLLNHPEILKNAQREIDNQV  237 (404)
Q Consensus       214 ~~l~~L~~~P~~q~kl~~Ei~~~~  237 (404)
                      -++.+|.+||++.+||.+.=.+.+
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLI   27 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLI   27 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEe
Confidence            357899999999999987544333


No 36 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=50.48  E-value=12  Score=31.28  Aligned_cols=43  Identities=16%  Similarity=0.224  Sum_probs=31.6

Q ss_pred             ChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEE
Q 015593          251 LPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLV  295 (404)
Q Consensus       251 lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~  295 (404)
                      -..+.|||.|+.-.....-.  .=...+|+.++|..|||||.+.-
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~v--rlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSRV--RLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCEE--EEEEcCceEECCEEeCCCCEEEE
Confidence            44677889988766544332  12347899999999999999977


No 37 
>PRK06789 flagellar motor switch protein; Validated
Probab=48.32  E-value=18  Score=24.73  Aligned_cols=40  Identities=15%  Similarity=0.155  Sum_probs=32.8

Q ss_pred             HHHhhcCCCCCCCccCccccCCc--ccccceEeCCCCEEEEe
Q 015593          257 IINETLRMYPPAPMLMPHESSDE--CTVLGYSIPRGTTLLVN  296 (404)
Q Consensus       257 ~i~E~lRl~p~~~~~~~R~~~~~--~~~~g~~Ip~Gt~v~~~  296 (404)
                      -++|.+.+.+..-.-+-|.+.++  +.++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            36889999998888777887655  55699999999999876


No 38 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=46.04  E-value=17  Score=27.91  Aligned_cols=23  Identities=17%  Similarity=0.353  Sum_probs=17.0

Q ss_pred             CCCCChhHHHHHHHHHHHHHhhc
Q 015593          338 RGCPGEGLGLKMVGLALGSLIQC  360 (404)
Q Consensus       338 r~C~G~~~A~~~~~~~l~~ll~~  360 (404)
                      -+|.|++||..++-.++..++..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            37999999999999999999875


No 39 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=41.71  E-value=12  Score=23.50  Aligned_cols=9  Identities=56%  Similarity=1.339  Sum_probs=8.3

Q ss_pred             ccCCCCCCC
Q 015593          332 PFGSGRRGC  340 (404)
Q Consensus       332 ~FG~G~r~C  340 (404)
                      +||-|+|.|
T Consensus        13 kfg~GsrsC   21 (56)
T KOG3506|consen   13 KFGQGSRSC   21 (56)
T ss_pred             ccCCCCcce
Confidence            699999999


No 40 
>PHA03162 hypothetical protein; Provisional
Probab=34.43  E-value=36  Score=25.91  Aligned_cols=26  Identities=15%  Similarity=0.367  Sum_probs=21.8

Q ss_pred             CCCCCCCCChhHHHHHHHHHHHHHhh
Q 015593          334 GSGRRGCPGEGLGLKMVGLALGSLIQ  359 (404)
Q Consensus       334 G~G~r~C~G~~~A~~~~~~~l~~ll~  359 (404)
                      ++|.+.|||+.+.+-++..=|+.|=.
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kLqm   27 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKLQL   27 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHHHH
Confidence            46999999999999999888776643


No 41 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=32.37  E-value=28  Score=22.59  Aligned_cols=8  Identities=38%  Similarity=0.725  Sum_probs=5.9

Q ss_pred             CcCccCCC
Q 015593          314 KPERFQGH  321 (404)
Q Consensus       314 ~P~R~l~~  321 (404)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78888863


No 42 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=29.72  E-value=29  Score=29.18  Aligned_cols=20  Identities=35%  Similarity=0.933  Sum_probs=18.0

Q ss_pred             hhhhcCCCCCCCCCCCCcCc
Q 015593          298 WAIQNDPKIWEDPRKFKPER  317 (404)
Q Consensus       298 ~~~~~d~~~~~~p~~F~P~R  317 (404)
                      +.-|.|+.+|.|.+.|+|-|
T Consensus       192 ~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccccCccccCCCC
Confidence            55699999999999999988


No 43 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=27.09  E-value=44  Score=23.46  Aligned_cols=20  Identities=10%  Similarity=0.428  Sum_probs=17.3

Q ss_pred             HHHHHHHHHHhhccEEEecc
Q 015593          348 KMVGLALGSLIQCFEWERIG  367 (404)
Q Consensus       348 ~~~~~~l~~ll~~f~~~~~~  367 (404)
                      .-|+-++..+|+-|||++++
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            34788999999999999976


No 44 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=26.62  E-value=58  Score=17.98  Aligned_cols=16  Identities=25%  Similarity=0.453  Sum_probs=12.8

Q ss_pred             CCCcccccCCCCCCCC
Q 015593          326 DGFRMMPFGSGRRGCP  341 (404)
Q Consensus       326 ~~~~~~~FG~G~r~C~  341 (404)
                      ....|+|+++..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            4567999998888884


No 45 
>PRK05933 type III secretion system protein; Validated
Probab=26.13  E-value=50  Score=29.69  Aligned_cols=43  Identities=14%  Similarity=0.217  Sum_probs=34.9

Q ss_pred             HHHHHHhhcCCCCCCCccCcccc---CCcccccceEeCCCCEEEEe
Q 015593          254 LGSIINETLRMYPPAPMLMPHES---SDECTVLGYSIPRGTTLLVN  296 (404)
Q Consensus       254 l~a~i~E~lRl~p~~~~~~~R~~---~~~~~~~g~~Ip~Gt~v~~~  296 (404)
                      ..--|+|.++|.+....-+-|.+   .-|+.++|..|.+|.+|+++
T Consensus       317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            45569999999999888775654   35677799999999999886


No 46 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=25.87  E-value=18  Score=26.35  Aligned_cols=18  Identities=33%  Similarity=0.601  Sum_probs=14.6

Q ss_pred             CCCcccccCCCCCCCCCh
Q 015593          326 DGFRMMPFGSGRRGCPGE  343 (404)
Q Consensus       326 ~~~~~~~FG~G~r~C~G~  343 (404)
                      .....+|||.|.-.|+|.
T Consensus       103 ~gss~~p~GaGaAaC~aA  120 (131)
T PF14459_consen  103 CGSSNNPFGAGAAACFAA  120 (131)
T ss_pred             cCcccCCcCccHHHHHHH
Confidence            456789999999999874


No 47 
>PHA01346 hypothetical protein
Probab=25.45  E-value=59  Score=19.16  Aligned_cols=18  Identities=17%  Similarity=0.394  Sum_probs=14.0

Q ss_pred             cChH-HHHHHHHHHhHhhc
Q 015593          221 NHPE-ILKNAQREIDNQVG  238 (404)
Q Consensus       221 ~~P~-~q~kl~~Ei~~~~~  238 (404)
                      .+|+ -|+|+.+|+++.+.
T Consensus        28 sdpdfsqekihaeldsllr   46 (53)
T PHA01346         28 SDPDFSQEKIHAELDSLLR   46 (53)
T ss_pred             CCCCccHHHHHHHHHHHHH
Confidence            3677 58999999997653


No 48 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=24.56  E-value=1.4e+02  Score=21.20  Aligned_cols=18  Identities=22%  Similarity=0.497  Sum_probs=15.6

Q ss_pred             ChHHHHHHHHHHhHhhcC
Q 015593          222 HPEILKNAQREIDNQVGH  239 (404)
Q Consensus       222 ~P~~q~kl~~Ei~~~~~~  239 (404)
                      .|++...+|+||-+|+..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            499999999999988764


No 49 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=24.54  E-value=1.2e+02  Score=27.39  Aligned_cols=71  Identities=14%  Similarity=0.219  Sum_probs=44.6

Q ss_pred             hHHHHHHhhcCCCCCCCcc---CccccCCccccc----ceEeCCCCEEEEechhhhcCCCCCCCCCCCCcCccCCCCCCC
Q 015593          253 YLGSIINETLRMYPPAPML---MPHESSDECTVL----GYSIPRGTTLLVNIWAIQNDPKIWEDPRKFKPERFQGHQGAR  325 (404)
Q Consensus       253 ~l~a~i~E~lRl~p~~~~~---~~R~~~~~~~~~----g~~Ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~  325 (404)
                      +=+.+++.+..+.||.-.+   +--.++.|.++-    .-.|..||-|.++-                            
T Consensus       274 ~ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~G----------------------------  325 (361)
T COG1759         274 MGERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMGG----------------------------  325 (361)
T ss_pred             HHHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccCC----------------------------
Confidence            3456788888899976543   222234554442    34688888877761                            


Q ss_pred             CCCcccccCCCCCCCCChhHHHHHHHHHH
Q 015593          326 DGFRMMPFGSGRRGCPGEGLGLKMVGLAL  354 (404)
Q Consensus       326 ~~~~~~~FG~G~r~C~G~~~A~~~~~~~l  354 (404)
                      +++.++-||  .=+..|+++|. |++.++
T Consensus       326 spYs~l~~~--~pms~GrRIA~-EIk~A~  351 (361)
T COG1759         326 SPYSNLYWG--EPMSTGRRIAR-EIKEAI  351 (361)
T ss_pred             CcchhhhcC--CCcchhhHHHH-HHHHHH
Confidence            334455554  44678999998 777665


No 50 
>PF04798 Baculo_19:  Baculovirus 19 kDa protein conserved region;  InterPro: IPR006883 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf96; it is a family of uncharacterised viral proteins.
Probab=24.54  E-value=18  Score=28.24  Aligned_cols=24  Identities=17%  Similarity=0.299  Sum_probs=18.1

Q ss_pred             CCCcccccCCCCCCCCChhHHHHHH
Q 015593          326 DGFRMMPFGSGRRGCPGEGLGLKMV  350 (404)
Q Consensus       326 ~~~~~~~FG~G~r~C~G~~~A~~~~  350 (404)
                      .-+.|+- |.+.|.||+..+|..-+
T Consensus        56 ~lYyYle-gss~~~CP~nE~avVrf   79 (146)
T PF04798_consen   56 TLYYYLE-GSSSVFCPPNEFAVVRF   79 (146)
T ss_pred             eEEEEEe-ccccccCCCCceEEEEE
Confidence            3456778 89999999888875543


No 51 
>KOG2376 consensus Signal recognition particle, subunit Srp72 [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.47  E-value=44  Score=32.71  Aligned_cols=26  Identities=23%  Similarity=0.348  Sum_probs=11.8

Q ss_pred             CcCccCCCCCCCCCCcccccCCCCCCCCC
Q 015593          314 KPERFQGHQGARDGFRMMPFGSGRRGCPG  342 (404)
Q Consensus       314 ~P~R~l~~~~~~~~~~~~~FG~G~r~C~G  342 (404)
                      ||||||+..   ....|-|=-.|.|.-+|
T Consensus       582 DPERWLP~r---eRS~yr~KrK~k~~~~~  607 (652)
T KOG2376|consen  582 DPERWLPRR---ERSTYRPKRKGKRAAII  607 (652)
T ss_pred             Chhhcccch---hccccCcccccchhhhh
Confidence            455666531   33334444455553333


No 52 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=23.40  E-value=56  Score=30.74  Aligned_cols=45  Identities=16%  Similarity=0.159  Sum_probs=32.5

Q ss_pred             CChhHHHHHHhhcCCCCCCCccCccccCCcccccceEeCCCCEEEEe
Q 015593          250 RLPYLGSIINETLRMYPPAPMLMPHESSDECTVLGYSIPRGTTLLVN  296 (404)
Q Consensus       250 ~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~Ip~Gt~v~~~  296 (404)
                      .-..+.|||.|+.-..-..-.  .=...+|+.++|..|||||.|+..
T Consensus       254 ~~n~I~A~V~~~qtv~~G~~v--rlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGSAV--KLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCCceEEEEcCceEEecCCEE--EEEEcCceeeCCEEecCCCEEEEE
Confidence            345778899988766543332  122468999999999999998765


No 53 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=21.18  E-value=3e+02  Score=19.29  Aligned_cols=49  Identities=6%  Similarity=0.019  Sum_probs=39.5

Q ss_pred             ChHHHHHHHHHHhhccccchhhHHHHHHHHHhcChHHHHHHHHHHhHhh
Q 015593          189 NDQTIGSLMLVLIGGGTDTTTNTMEWALSLLLNHPEILKNAQREIDNQV  237 (404)
Q Consensus       189 s~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~  237 (404)
                      +...........++-=+.+++....-.+.+-++||+...++.+.+..-+
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            3445555666778888999999999999999999999999988887544


No 54 
>PTZ00218 40S ribosomal protein S29; Provisional
Probab=21.15  E-value=42  Score=21.24  Aligned_cols=15  Identities=33%  Similarity=0.787  Sum_probs=10.9

Q ss_pred             ccCCCCCCC--CChhHH
Q 015593          332 PFGSGRRGC--PGEGLG  346 (404)
Q Consensus       332 ~FG~G~r~C--~G~~~A  346 (404)
                      .||.|+|.|  =|..-|
T Consensus        11 ~yGkGsr~C~vCg~~~g   27 (54)
T PTZ00218         11 TYGKGSRQCRVCSNRHG   27 (54)
T ss_pred             cCCCCCCeeecCCCcch
Confidence            589999999  465433


No 55 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=20.66  E-value=1.2e+02  Score=18.01  Aligned_cols=18  Identities=17%  Similarity=0.320  Sum_probs=14.5

Q ss_pred             HHHHHHHhcChHHHHHHH
Q 015593          213 EWALSLLLNHPEILKNAQ  230 (404)
Q Consensus       213 ~~~l~~L~~~P~~q~kl~  230 (404)
                      .|.++-++++||+|.-|.
T Consensus        13 l~gl~~~l~DpdvqrgL~   30 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLG   30 (42)
T ss_pred             HHHHHHHHcCHHHHHHHH
Confidence            466778899999998776


No 56 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=20.06  E-value=83  Score=24.82  Aligned_cols=21  Identities=33%  Similarity=0.422  Sum_probs=17.8

Q ss_pred             CCcccccceEeCCCCEEEEec
Q 015593          277 SDECTVLGYSIPRGTTLLVNI  297 (404)
Q Consensus       277 ~~~~~~~g~~Ip~Gt~v~~~~  297 (404)
                      .+|+.++|..||+|++-+..+
T Consensus        53 ~~dv~igGk~l~AG~Ysl~ti   73 (145)
T PF11138_consen   53 SKDVTIGGKKLKAGTYSLFTI   73 (145)
T ss_pred             CCCeEECCEEcCCeeEEEEEe
Confidence            478999999999999877654


Done!