BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015594
(404 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 155/285 (54%), Gaps = 28/285 (9%)
Query: 101 LIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRA-AFTQEVAVWHK 159
L IK G+FGTVHR + G DVAVK+L E + + R F +EVA+ +
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKIL--------MEQDFHAERVNEFLREVAIMKR 90
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN-RRRKL 218
L HPN+ F+GA + P N +V EY G+L L K+ R +L
Sbjct: 91 LRHPNIVLFMGA---------------VTQPPNLS-IVTEYLSRGSLYRLLHKSGAREQL 134
Query: 219 AFKVVIQLALDLARGLSYLQSKK--IVHRDVKTENMLLDKTRTVKIADFGVARLEASNPH 276
+ + +A D+A+G++YL ++ IVHRD+K+ N+L+DK TVK+ DFG++RL+AS
Sbjct: 135 DERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL 194
Query: 277 DMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQ 336
GT +MAPEVL N K DVYSFG+ LWE+ P+ +L+ ++V +AV +
Sbjct: 195 XSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254
Query: 337 NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
R EIPR +A +++ CW P KRP ++ +L + S
Sbjct: 255 CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 155/285 (54%), Gaps = 28/285 (9%)
Query: 101 LIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRA-AFTQEVAVWHK 159
L IK G+FGTVHR + G DVAVK+L E + + R F +EVA+ +
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKIL--------MEQDFHAERVNEFLREVAIMKR 90
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN-RRRKL 218
L HPN+ F+GA + P N +V EY G+L L K+ R +L
Sbjct: 91 LRHPNIVLFMGA---------------VTQPPNLS-IVTEYLSRGSLYRLLHKSGAREQL 134
Query: 219 AFKVVIQLALDLARGLSYLQSKK--IVHRDVKTENMLLDKTRTVKIADFGVARLEASNPH 276
+ + +A D+A+G++YL ++ IVHR++K+ N+L+DK TVK+ DFG++RL+AS
Sbjct: 135 DERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL 194
Query: 277 DMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQ 336
GT +MAPEVL N K DVYSFG+ LWE+ P+ +L+ ++V +AV +
Sbjct: 195 SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254
Query: 337 NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
R EIPR +A +++ CW P KRP ++ +L + S
Sbjct: 255 CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 149/295 (50%), Gaps = 35/295 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WEI ++ + G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 6 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 57
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV V K H N+ F+G + +V ++C G +L +L
Sbjct: 58 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 99
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
K K +I +A ARG+ YL +K I+HRD+K+ N+ L + TVKI DFG+A +++
Sbjct: 100 ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKS 159
Query: 273 --SNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 326
S H +G++ +MAPEV+ + + Y+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 160 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 219
Query: 327 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++ V R +L P++ + CP + +M C D+RP ++A +E +
Sbjct: 220 DQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 148/295 (50%), Gaps = 35/295 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WEI ++ + G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 69
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV V K H N+ F+G + +V ++C G +L +L
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTAPQ-----------------LAIVTQWCEGSSLYHHL-H 111
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
K K +I +A ARG+ YL +K I+HRD+K+ N+ L + TVKI DFG+A ++
Sbjct: 112 ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
Query: 273 --SNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 326
S H +G++ +MAPEV+ + + Y+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 231
Query: 327 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++ V R +L P++ + CP + +M C D+RP ++A +E +
Sbjct: 232 DQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 148/295 (50%), Gaps = 35/295 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WEI ++ + G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 69
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV V K H N+ F+G + +V ++C G +L +L
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 111
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
K K +I +A ARG+ YL +K I+HRD+K+ N+ L + TVKI DFG+A ++
Sbjct: 112 ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
Query: 273 --SNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 326
S H +G++ +MAPEV+ + + Y+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 231
Query: 327 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++ V R +L P++ + CP + +M C D+RP ++A +E +
Sbjct: 232 DQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 148/305 (48%), Gaps = 42/305 (13%)
Query: 96 IDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVA 155
ID ++ ++ RG FG V + + +DVA+K ++ SE+E R AF E+
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE-------SESE----RKAFIVELR 54
Query: 156 VWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR 215
+++HPN+ K GA + N C+V+EY GG+L Y + +
Sbjct: 55 QLSRVNHPNIVKLYGACL------------------NPVCLVMEYAEGGSL--YNVLHGA 94
Query: 216 RKLAFKVV---IQLALDLARGLSYL---QSKKIVHRDVKTENMLLDKTRTV-KIADFGVA 268
L + + L ++G++YL Q K ++HRD+K N+LL TV KI DFG A
Sbjct: 95 EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 154
Query: 269 RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 328
MT G+ +MAPEV GS Y+ KCDV+S+GI LWE+ P+ ++
Sbjct: 155 ---CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 211
Query: 329 V-TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMI 387
V RP + + P + ++M RCW +P +RP M+E+V ++ + G
Sbjct: 212 FRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 271
Query: 388 PVDQP 392
P+ P
Sbjct: 272 PLQYP 276
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 148/305 (48%), Gaps = 42/305 (13%)
Query: 96 IDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVA 155
ID ++ ++ RG FG V + + +DVA+K ++ SE+E R AF E+
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE-------SESE----RKAFIVELR 53
Query: 156 VWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR 215
+++HPN+ K GA + N C+V+EY GG+L Y + +
Sbjct: 54 QLSRVNHPNIVKLYGACL------------------NPVCLVMEYAEGGSL--YNVLHGA 93
Query: 216 RKLAFKVV---IQLALDLARGLSYL---QSKKIVHRDVKTENMLLDKTRTV-KIADFGVA 268
L + + L ++G++YL Q K ++HRD+K N+LL TV KI DFG A
Sbjct: 94 EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
Query: 269 RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 328
MT G+ +MAPEV GS Y+ KCDV+S+GI LWE+ P+ ++
Sbjct: 154 ---CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 210
Query: 329 V-TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMI 387
V RP + + P + ++M RCW +P +RP M+E+V ++ + G
Sbjct: 211 FRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 270
Query: 388 PVDQP 392
P+ P
Sbjct: 271 PLQYP 275
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 35/298 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WEI ++ + G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 53
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV V K H N+ F+G + +V ++C G +L +L
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTAPQ-----------------LAIVTQWCEGSSLYHHL-H 95
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
K +I +A A+G+ YL +K I+HRD+K+ N+ L + TVKI DFG+A +++
Sbjct: 96 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155
Query: 273 --SNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 326
S H +G++ +MAPEV+ + + Y+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 327 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
++ V R L P++ + CP ++ +M C D+RP +++A +E + S
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 37/295 (12%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
EID A+L ++ G FG V+R + G +VAVK H + +I+ QE
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVK-----AARHDPDEDISQTIENVRQEA 57
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
++ L HPN+ G + L C+V+E+ GG L L
Sbjct: 58 KLFAMLKHPNIIALRGVCLKEPNL----------------CLVMEFARGGPLNRVL---S 98
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIV---HRDVKTENMLLDK--------TRTVKIA 263
+++ +++ A+ +ARG++YL + IV HRD+K+ N+L+ + + +KI
Sbjct: 99 GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158
Query: 264 DFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD 323
DFG+AR E M+ G +MAPEV+ S +++ DV+S+G+ LWE+ ++P+
Sbjct: 159 DFGLAR-EWHRTTKMSA-AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ V V L IP CP A +M+ CW+ +P RP ++ L I
Sbjct: 217 IDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 35/298 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WEI ++ + G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 81
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV V K H N+ F+G + +V ++C G +L +L
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 123
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
K +I +A A+G+ YL +K I+HRD+K+ N+ L + TVKI DFG+A +++
Sbjct: 124 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 183
Query: 273 --SNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 326
S H +G++ +MAPEV+ + + Y+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
Query: 327 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
++ V R L P++ + CP ++ +M C D+RP +++A +E + S
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 301
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 35/298 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WEI ++ + G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 58
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV V K H N+ F+G + +V ++C G +L +L
Sbjct: 59 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 100
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
K +I +A A+G+ YL +K I+HRD+K+ N+ L + TVKI DFG+A +++
Sbjct: 101 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 160
Query: 273 --SNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 326
S H +G++ +MAPEV+ + + Y+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 161 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
Query: 327 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
++ V R L P++ + CP ++ +M C D+RP +++A +E + S
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 278
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 35/298 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WEI ++ + G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 29 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 80
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV V K H N+ F+G + +V ++C G +L +L
Sbjct: 81 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 122
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
K +I +A A+G+ YL +K I+HRD+K+ N+ L + TVKI DFG+A +++
Sbjct: 123 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 182
Query: 273 --SNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 326
S H +G++ +MAPEV+ + + Y+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 183 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 242
Query: 327 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
++ V R L P++ + CP ++ +M C D+RP +++A +E + S
Sbjct: 243 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 300
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 35/298 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WEI ++ + G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 4 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 55
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV V K H N+ F+G + +V ++C G +L +L
Sbjct: 56 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 97
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
K +I +A A+G+ YL +K I+HRD+K+ N+ L + TVKI DFG+A +++
Sbjct: 98 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 157
Query: 273 --SNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 326
S H +G++ +MAPEV+ + + Y+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 158 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 217
Query: 327 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
++ V R L P++ + CP ++ +M C D+RP +++A +E + S
Sbjct: 218 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 275
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 35/298 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WEI ++ + G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 58
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV V K H N+ F+G + +V ++C G +L +L
Sbjct: 59 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 100
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
K +I +A A+G+ YL +K I+HRD+K+ N+ L + TVKI DFG+A +++
Sbjct: 101 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 160
Query: 273 --SNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 326
S H +G++ +MAPEV+ + + Y+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 161 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
Query: 327 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
++ V R L P++ + CP ++ +M C D+RP +++A +E + S
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 278
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 35/298 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WEI ++ + G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 53
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV V K H N+ F+G + +V ++C G +L +L
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 95
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
K +I +A A+G+ YL +K I+HRD+K+ N+ L + TVKI DFG+A +++
Sbjct: 96 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155
Query: 273 --SNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 326
S H +G++ +MAPEV+ + + Y+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 327 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
++ V R L P++ + CP ++ +M C D+RP +++A +E + S
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 149/298 (50%), Gaps = 35/298 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WEI ++ + G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 22 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 73
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV V K H N+ F+G + +V ++C G +L +L
Sbjct: 74 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 115
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
K +I +A A+G+ YL +K I+HRD+K+ N+ L + TVKI DFG+A ++
Sbjct: 116 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 175
Query: 273 --SNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 326
S H +G++ +MAPEV+ + + Y+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 176 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 235
Query: 327 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
++ V R L P++ + CP ++ +M C D+RP +++A +E + S
Sbjct: 236 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 293
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 149/298 (50%), Gaps = 35/298 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WEI ++ + G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 81
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV V K H N+ F+G + +V ++C G +L +L
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 123
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
K +I +A A+G+ YL +K I+HRD+K+ N+ L + TVKI DFG+A ++
Sbjct: 124 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 183
Query: 273 --SNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 326
S H +G++ +MAPEV+ + + Y+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
Query: 327 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
++ V R L P++ + CP ++ +M C D+RP +++A +E + S
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 301
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 149/298 (50%), Gaps = 35/298 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WEI ++ + G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 53
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV V K H N+ F+G + +V ++C G +L +L
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 95
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
K +I +A A+G+ YL +K I+HRD+K+ N+ L + TVKI DFG+A ++
Sbjct: 96 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 155
Query: 273 --SNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 326
S H +G++ +MAPEV+ + + Y+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 327 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
++ V R L P++ + CP ++ +M C D+RP +++A +E + S
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 139/291 (47%), Gaps = 35/291 (12%)
Query: 96 IDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
IDP++L G FG VH G + +D VA+K + G S F +E
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----------FIEEA 53
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
V KL HP + + G + + + C+V E+ G L YL + +
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAPI----------------CLVFEFMEHGCLSDYL-RTQ 96
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
R A + ++ + LD+ G++YL+ ++HRD+ N L+ + + +K++DFG+ R +
Sbjct: 97 RGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 156
Query: 275 PHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
+ T TGT + + +PEV + S Y+ K DV+SFG+ +WE++ +PY + S SEV
Sbjct: 157 QY--TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+ R PR + + +M CW P+ RP ++ L AI S
Sbjct: 215 ED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 142/294 (48%), Gaps = 34/294 (11%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASL 146
+++EI ++ + G FG VH+GIY + VA+K S+
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC--------KNCTSDSV 434
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R F QE + DHP++ K IG + N +++E C G L
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPVWIIMELCTLGEL 477
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+S+L + R+ L +I A L+ L+YL+SK+ VHRD+ N+L+ T VK+ DFG
Sbjct: 478 RSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFG 536
Query: 267 VAR-LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDL 324
++R +E S + + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 537 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596
Query: 325 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++V + P +P CP +L ++M +CW +P +RP E+ A L I
Sbjct: 597 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 58
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G T E P + +++E+ G L YL +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVC--TRE------------PPFY--IIIEFMTYGNLLDYLRE 102
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R++++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 103 CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 160
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 161 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 216 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 20 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 76
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 77 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 112
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ YL SKK VHRD+ N +LD+ TV
Sbjct: 113 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTV 171
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 172 KVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 232 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 288
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 289 RISAIFSTFIG 299
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 58
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G T E P + +++E+ G L YL +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVC--TRE------------PPFY--IIIEFMTYGNLLDYLRE 102
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R++++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 103 CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 160
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 161 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 216 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 140/291 (48%), Gaps = 31/291 (10%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIY--DGQDVAVKLLDWGEESHRSEAEIASLRAAF 150
+W ++ L++ RG FG V G D VAVK S R E L+A F
Sbjct: 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVK-------SCR-ETLPPDLKAKF 159
Query: 151 TQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL 210
QE + + HPN+ + IG + I V+E GG ++L
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYI----------------VMELVQGGDFLTFL 203
Query: 211 IKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARL 270
+ +L K ++Q+ D A G+ YL+SK +HRD+ N L+ + +KI+DFG++R
Sbjct: 204 -RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSRE 262
Query: 271 EASNPHDMTG--ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFS 327
EA + +G + + APE LN Y+ + DV+SFGI LWE + PYP+LS +
Sbjct: 263 EADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS-N 321
Query: 328 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ T V + R P CP ++ +M++CW P +RP + L++I
Sbjct: 322 QQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 140/294 (47%), Gaps = 35/294 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFT 151
+W IDP++L G FG VH G + +D VA+K + G S F
Sbjct: 2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----------FI 51
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
+E V KL HP + + G + + + C+V E+ G L YL
Sbjct: 52 EEAEVMMKLSHPKLVQLYGVCLEQAPI----------------CLVTEFMEHGCLSDYL- 94
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
+ +R A + ++ + LD+ G++YL+ ++HRD+ N L+ + + +K++DFG+ R
Sbjct: 95 RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV 154
Query: 272 ASNPHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFS 327
+ + T TGT + + +PEV + S Y+ K DV+SFG+ +WE++ +PY + S S
Sbjct: 155 LDDQY--TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS 212
Query: 328 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
EV + R PR + + +M CW P+ RP ++ L I S
Sbjct: 213 EVVED-ISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 142/294 (48%), Gaps = 34/294 (11%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASL 146
+++EI ++ + G FG VH+GIY + VA+K S+
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC--------KNCTSDSV 54
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R F QE + DHP++ K IG + N +++E C G L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPVWIIMELCTLGEL 97
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+S+L + R+ L +I A L+ L+YL+SK+ VHRD+ N+L+ T VK+ DFG
Sbjct: 98 RSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFG 156
Query: 267 VAR-LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDL 324
++R +E S + + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 157 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
Query: 325 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++V + R +P CP +L ++M +CW +P +RP E+ A L I
Sbjct: 217 KNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 140/294 (47%), Gaps = 35/294 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFT 151
+W IDP++L G FG VH G + +D VA+K + G S F
Sbjct: 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----------FI 53
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
+E V KL HP + + G + + + C+V E+ G L YL
Sbjct: 54 EEAEVMMKLSHPKLVQLYGVCLEQAPI----------------CLVFEFMEHGCLSDYL- 96
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
+ +R A + ++ + LD+ G++YL+ ++HRD+ N L+ + + +K++DFG+ R
Sbjct: 97 RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV 156
Query: 272 ASNPHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFS 327
+ + T TGT + + +PEV + S Y+ K DV+SFG+ +WE++ +PY + S S
Sbjct: 157 LDDQY--TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS 214
Query: 328 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
EV + R PR + + +M CW P+ RP ++ L I S
Sbjct: 215 EVVED-ISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 141/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 59
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I ++E+ G L YL +
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------IIEFMTYGNLLDYLRE 103
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 104 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 161
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 162 -----MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 217 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 39 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 95
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 96 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 131
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ YL SKK VHRD+ N +LD+ TV
Sbjct: 132 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTV 190
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 191 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 251 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 307
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 308 RISAIFSTFIG 318
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 77
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 78 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 113
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ YL SKK VHRD+ N +LD+ TV
Sbjct: 114 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTV 172
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 173 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 233 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 289
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 290 RISAIFSTFIG 300
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 19 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 75
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 76 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 111
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ YL SKK VHRD+ N +LD+ TV
Sbjct: 112 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTV 170
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 171 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 231 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 287
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 288 RISAIFSTFIG 298
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 13 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 69
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 70 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 105
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ YL SKK VHRD+ N +LD+ TV
Sbjct: 106 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTV 164
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 165 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 225 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 281
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 282 RISAIFSTFIG 292
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 18 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 74
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 75 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 110
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ YL SKK VHRD+ N +LD+ TV
Sbjct: 111 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTV 169
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 170 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 230 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 286
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 287 RISAIFSTFIG 297
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 77
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 78 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 113
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ YL SKK VHRD+ N +LD+ TV
Sbjct: 114 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTV 172
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 173 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 233 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 289
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 290 RISAIFSTFIG 300
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 20 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 76
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 77 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 112
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ YL SKK VHRD+ N +LD+ TV
Sbjct: 113 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTV 171
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 172 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 232 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 288
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 289 RISAIFSTFIG 299
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 40 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 96
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 97 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 132
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ YL SKK VHRD+ N +LD+ TV
Sbjct: 133 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTV 191
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 192 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 252 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 308
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 309 RISAIFSTFIG 319
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 16 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 72
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 73 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 108
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ YL SKK VHRD+ N +LD+ TV
Sbjct: 109 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTV 167
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 168 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 228 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 284
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 285 RISAIFSTFIG 295
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 141/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 63
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I + E+ G L YL +
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLRE 107
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R++++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 108 CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 165
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 166 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 221 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 145/295 (49%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G FG V+ G++ + V + E++ E F +
Sbjct: 5 KWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 56
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G T E P + ++ E+ G L YL +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVC--TRE------------PPFY--IITEFMTYGNLLDYLRE 100
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R++++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 101 CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 158
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 159 -----MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 214 IDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 145/295 (49%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 58
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G T E P + ++ E+ G L YL +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVC--TRE------------PPFY--IITEFMTYGNLLDYLRE 102
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R++++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 103 CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 160
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 161 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 216 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 141/294 (47%), Gaps = 34/294 (11%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASL 146
+++EI ++ + G FG VH+GIY + VA+K S+
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC--------KNCTSDSV 434
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R F QE + DHP++ K IG + N +++E C G L
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPVWIIMELCTLGEL 477
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+S+L + R+ L +I A L+ L+YL+SK+ VHRD+ N+L+ VK+ DFG
Sbjct: 478 RSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 536
Query: 267 VAR-LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDL 324
++R +E S + + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 537 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596
Query: 325 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++V + P +P CP +L ++M +CW +P +RP E+ A L I
Sbjct: 597 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 141/294 (47%), Gaps = 34/294 (11%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASL 146
+++EI ++ + G FG VH+GIY + VA+K S+
Sbjct: 6 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC--------KNCTSDSV 57
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R F QE + DHP++ K IG + N +++E C G L
Sbjct: 58 REKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPVWIIMELCTLGEL 100
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+S+L + R+ L +I A L+ L+YL+SK+ VHRD+ N+L+ VK+ DFG
Sbjct: 101 RSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 159
Query: 267 VAR-LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDL 324
++R +E S + + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 160 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 219
Query: 325 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++V + P +P CP +L ++M +CW +P +RP E+ A L I
Sbjct: 220 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 141/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 58
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I + E+ G L YL +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLRE 102
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R++++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 103 CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 160
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 161 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 216 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 141/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 63
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I ++E+ G L YL +
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------IIEFMTYGNLLDYLRE 107
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 108 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 165
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 166 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 221 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 141/294 (47%), Gaps = 34/294 (11%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASL 146
+++EI ++ + G FG VH+GIY + VA+K S+
Sbjct: 5 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC--------KNCTSDSV 56
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R F QE + DHP++ K IG + N +++E C G L
Sbjct: 57 REKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPVWIIMELCTLGEL 99
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+S+L + R+ L +I A L+ L+YL+SK+ VHRD+ N+L+ VK+ DFG
Sbjct: 100 RSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 158
Query: 267 VAR-LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDL 324
++R +E S + + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 159 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 218
Query: 325 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++V + P +P CP +L ++M +CW +P +RP E+ A L I
Sbjct: 219 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 142/295 (48%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 56
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I ++E+ G L YL +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------IIEFMTYGNLLDYLRE 100
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R++++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 101 CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 158
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 159 -----MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 214 IDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 141/294 (47%), Gaps = 34/294 (11%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASL 146
+++EI ++ + G FG VH+GIY + VA+K S+
Sbjct: 8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC--------KNCTSDSV 59
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R F QE + DHP++ K IG + N +++E C G L
Sbjct: 60 REKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPVWIIMELCTLGEL 102
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+S+L + R+ L +I A L+ L+YL+SK+ VHRD+ N+L+ VK+ DFG
Sbjct: 103 RSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 161
Query: 267 VAR-LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDL 324
++R +E S + + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 162 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 221
Query: 325 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++V + P +P CP +L ++M +CW +P +RP E+ A L I
Sbjct: 222 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 139/291 (47%), Gaps = 31/291 (10%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIY--DGQDVAVKLLDWGEESHRSEAEIASLRAAF 150
+W ++ L++ RG FG V G D VAVK S R E L+A F
Sbjct: 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVK-------SCR-ETLPPDLKAKF 159
Query: 151 TQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL 210
QE + + HPN+ + IG + I V+E GG ++L
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYI----------------VMELVQGGDFLTFL 203
Query: 211 IKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARL 270
+ +L K ++Q+ D A G+ YL+SK +HRD+ N L+ + +KI+DFG++R
Sbjct: 204 -RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSRE 262
Query: 271 EASNPHDMTG--ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFS 327
EA +G + + APE LN Y+ + DV+SFGI LWE + PYP+LS +
Sbjct: 263 EADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS-N 321
Query: 328 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ T V + R P CP ++ +M++CW P +RP + L++I
Sbjct: 322 QQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 141/294 (47%), Gaps = 34/294 (11%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASL 146
+++EI ++ + G FG VH+GIY + VA+K S+
Sbjct: 31 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC--------KNCTSDSV 82
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R F QE + DHP++ K IG + N +++E C G L
Sbjct: 83 REKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPVWIIMELCTLGEL 125
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+S+L + R+ L +I A L+ L+YL+SK+ VHRD+ N+L+ VK+ DFG
Sbjct: 126 RSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 184
Query: 267 VAR-LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDL 324
++R +E S + + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 185 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 244
Query: 325 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++V + P +P CP +L ++M +CW +P +RP E+ A L I
Sbjct: 245 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 19 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 75
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 76 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 111
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ +L SKK VHRD+ N +LD+ TV
Sbjct: 112 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV 170
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 171 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 231 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 287
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 288 RISAIFSTFIG 298
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 80 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 136
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 137 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 172
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ +L SKK VHRD+ N +LD+ TV
Sbjct: 173 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV 231
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 232 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 292 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 348
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 349 RISAIFSTFIG 359
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 141/294 (47%), Gaps = 34/294 (11%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASL 146
+++EI ++ + G FG VH+GIY + VA+K S+
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC--------KNCTSDSV 54
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R F QE + DHP++ K IG + N +++E C G L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPVWIIMELCTLGEL 97
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+S+L + R+ L +I A L+ L+YL+SK+ VHRD+ N+L+ VK+ DFG
Sbjct: 98 RSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 156
Query: 267 VAR-LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDL 324
++R +E S + + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 157 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
Query: 325 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++V + R +P CP +L ++M +CW +P +RP E+ A L I
Sbjct: 217 KNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 140/293 (47%), Gaps = 34/293 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLR 147
++EI ++ + G FG VH+GIY + VA+K S+R
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC--------KNCTSDSVR 52
Query: 148 AAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALK 207
F QE + DHP++ K IG + N +++E C G L+
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPVWIIMELCTLGELR 95
Query: 208 SYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
S+L + R+ L +I A L+ L+YL+SK+ VHRD+ N+L+ VK+ DFG+
Sbjct: 96 SFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL 154
Query: 268 AR-LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLS 325
+R +E S + + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 155 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 214
Query: 326 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++V + P +P CP +L ++M +CW +P +RP E+ A L I
Sbjct: 215 NNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 22 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 78
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 79 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 114
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ +L SKK VHRD+ N +LD+ TV
Sbjct: 115 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV 173
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 174 KVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 234 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 290
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 291 RISAIFSTFIG 301
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 141/294 (47%), Gaps = 34/294 (11%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASL 146
+++EI ++ + G FG VH+GIY + VA+K S+
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC--------KNCTSDSV 54
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R F QE + DHP++ K IG + N +++E C G L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPVWIIMELCTLGEL 97
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+S+L + R+ L +I A L+ L+YL+SK+ VHRD+ N+L+ VK+ DFG
Sbjct: 98 RSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 156
Query: 267 VAR-LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDL 324
++R +E S + + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 157 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
Query: 325 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++V + R +P CP +L ++M +CW +P +RP E+ A L I
Sbjct: 217 KNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 146/309 (47%), Gaps = 45/309 (14%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 22 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 78
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 79 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 114
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ +L SKK VHRD+ N +LD+ TV
Sbjct: 115 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV 173
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 174 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
Query: 317 CDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAML 375
PYPD++ ++T ++ Q R P CP L VM +CW + RP E+V+ +
Sbjct: 234 RGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 292
Query: 376 EAIDTSKGG 384
AI ++ G
Sbjct: 293 SAIFSTFIG 301
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 26 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 82
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 83 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 118
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ +L SKK VHRD+ N +LD+ TV
Sbjct: 119 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV 177
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 178 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 238 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 294
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 295 RISAIFSTFIG 305
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 146/309 (47%), Gaps = 45/309 (14%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 77
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 78 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 113
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ +L SKK VHRD+ N +LD+ TV
Sbjct: 114 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV 172
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 173 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
Query: 317 CDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAML 375
PYPD++ ++T ++ Q R P CP L VM +CW + RP E+V+ +
Sbjct: 233 RGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291
Query: 376 EAIDTSKGG 384
AI ++ G
Sbjct: 292 SAIFSTFIG 300
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 63
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I + E+ G L YL +
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLRE 107
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 108 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 165
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 166 -----MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 221 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 92 QEWEIDPAKLII--KGAFARGTFGTVHRGIY---DGQDV--AVKLL----DWGEESHRSE 140
Q I P+ LI+ RG FG V+ G DG+ + AVK L D GE S
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--- 77
Query: 141 AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEY 200
F E + HPNV +G + + G P VV+ Y
Sbjct: 78 ---------FLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LVVLPY 113
Query: 201 CHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
G L+++ I+N K +I L +A+G+ +L SKK VHRD+ N +LD+ TV
Sbjct: 114 MKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV 172
Query: 261 KIADFGVAR----LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
K+ADFG+AR E + H+ TG + +MA E L + K DV+SFG+ LWE+
Sbjct: 173 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
Query: 317 CDM-PYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PYPD++ ++T ++ R+ L+PE CP L VM +CW + RP E+V+
Sbjct: 233 RGAPPYPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVS 289
Query: 374 MLEAIDTSKGG 384
+ AI ++ G
Sbjct: 290 RISAIFSTFIG 300
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 144/295 (48%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 20 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 71
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G T E P + ++ E+ G L YL +
Sbjct: 72 EAAVMKEIKHPNLVQLLGVC--TRE------------PPFY--IITEFMTYGNLLDYLRE 115
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 116 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 173
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 174 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 228
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 229 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 63
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I + E+ G L YL +
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLRE 107
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 108 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 165
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 166 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 221 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 59
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I + E+ G L YL +
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLRE 103
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 104 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 161
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 162 -----MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 217 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 62
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I + E+ G L YL +
Sbjct: 63 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLRE 106
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 107 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 164
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 165 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 219
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 220 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 60
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I + E+ G L YL +
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLRE 104
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 105 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 162
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 163 -----MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 218 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 144/295 (48%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 60
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G T E P + ++ E+ G L YL +
Sbjct: 61 EAAVMKEIKHPNLVQLLGVC--TRE------------PPFY--IITEFMTYGNLLDYLRE 104
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 105 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 162
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 163 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 218 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 60
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I + E+ G L YL +
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLRE 104
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 105 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 162
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 163 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 218 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 63
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I + E+ G L YL +
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLRE 107
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 108 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 165
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 166 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 221 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 58
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I + E+ G L YL +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLRE 102
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 103 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 160
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 161 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 216 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 58
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I + E+ G L YL +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLRE 102
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 103 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 160
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 161 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 216 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 141/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 265
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I + E+ G L YL +
Sbjct: 266 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLRE 309
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R++++ V++ +A ++ + YL+ K +HR++ N L+ + VK+ADFG++RL
Sbjct: 310 CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL-- 367
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 368 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 422
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 423 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 34/294 (11%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASL 146
+++EI ++ + G FG VH+GIY + VA+K S+
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC--------KNCTSDSV 54
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R F QE + DHP++ K IG + N +++E C G L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPVWIIMELCTLGEL 97
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+S+L + R+ L +I A L+ L+YL+SK+ VHRD+ N+L+ VK+ DFG
Sbjct: 98 RSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 156
Query: 267 VAR-LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDL 324
++R +E S + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 157 LSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
Query: 325 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++V + P +P CP +L ++M +CW +P +RP E+ A L I
Sbjct: 217 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 145/295 (49%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 56
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G T E P + ++ E+ G L YL +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVC--TRE------------PPFY--IITEFMTYGNLLDYLRE 100
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R++++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 101 CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 158
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 159 -----MTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 214 IDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 138/291 (47%), Gaps = 35/291 (12%)
Query: 96 IDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
IDP++L G FG VH G + +D VA+K + G S F +E
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----------FIEEA 53
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
V KL HP + + G + + + C+V E+ G L YL + +
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAPI----------------CLVFEFMEHGCLSDYL-RTQ 96
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
R A + ++ + LD+ G++YL+ ++HRD+ N L+ + + +K++DFG+ R +
Sbjct: 97 RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 156
Query: 275 PHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
+ T TGT + + +PEV + S Y+ K DV+SFG+ +WE++ +PY + S SEV
Sbjct: 157 QY--TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+ R PR + + +M CW P+ RP ++ L I S
Sbjct: 215 ED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 138/291 (47%), Gaps = 35/291 (12%)
Query: 96 IDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
IDP++L G FG VH G + +D VA+K + G S F +E
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----------FIEEA 51
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
V KL HP + + G + + + C+V E+ G L YL + +
Sbjct: 52 EVMMKLSHPKLVQLYGVCLEQAPI----------------CLVFEFMEHGCLSDYL-RTQ 94
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
R A + ++ + LD+ G++YL+ ++HRD+ N L+ + + +K++DFG+ R +
Sbjct: 95 RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 154
Query: 275 PHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
+ T TGT + + +PEV + S Y+ K DV+SFG+ +WE++ +PY + S SEV
Sbjct: 155 QY--TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 212
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+ R PR + + +M CW P+ RP ++ L I S
Sbjct: 213 ED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 138/291 (47%), Gaps = 35/291 (12%)
Query: 96 IDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
IDP++L G FG VH G + +D VA+K + G S F +E
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDD----------FIEEA 73
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
V KL HP + + G + + + C+V E+ G L YL + +
Sbjct: 74 EVMMKLSHPKLVQLYGVCLEQAPI----------------CLVFEFMEHGCLSDYL-RTQ 116
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
R A + ++ + LD+ G++YL+ ++HRD+ N L+ + + +K++DFG+ R +
Sbjct: 117 RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 176
Query: 275 PHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
+ T TGT + + +PEV + S Y+ K DV+SFG+ +WE++ +PY + S SEV
Sbjct: 177 QY--TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 234
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+ R PR + + +M CW P+ RP ++ L I S
Sbjct: 235 ED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 211 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 262
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I + E+ G L YL +
Sbjct: 263 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLRE 306
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HR++ N L+ + VK+ADFG++RL
Sbjct: 307 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL-- 364
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 365 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 419
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 420 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 253 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 304
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I + E+ G L YL +
Sbjct: 305 EAAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLRE 348
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R+++ V++ +A ++ + YL+ K +HR++ N L+ + VK+ADFG++RL
Sbjct: 349 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL-- 406
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 407 -----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 461
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 462 IDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 155/297 (52%), Gaps = 35/297 (11%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQE 153
WEI+ +++++ G+FGTV++G + G DVAVK+L + + AF E
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQ-------FQAFRNE 82
Query: 154 VAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN 213
VAV K H N+ F+G M + +V ++C G +L +L
Sbjct: 83 VAVLRKTRHVNILLFMGY-----------------MTKDNLAIVTQWCEGSSLYKHLHVQ 125
Query: 214 RRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA- 272
+ F++ I +A A+G+ YL +K I+HRD+K+ N+ L + TVKI DFG+A +++
Sbjct: 126 ETKFQMFQL-IDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184
Query: 273 -SNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGICLWEIYCCDMPYPDL-SFS 327
S + TG++ +MAPEV+ + + ++ + DVYS+GI L+E+ ++PY + +
Sbjct: 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD 244
Query: 328 EVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
++ V R P++ + CP ++ ++ C ++RP ++++ +E + S
Sbjct: 245 QIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 141/288 (48%), Gaps = 31/288 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQE 153
W ++ +L + +G FG V G Y G VAVK + +++A AF E
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-------KNDATAQ----AFLAE 55
Query: 154 VAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN 213
+V +L H N+ + +G I + G + +V EY G+L YL
Sbjct: 56 ASVMTQLRHSNLVQLLGV--------IVEEKGGL-------YIVTEYMAKGSLVDYLRSR 100
Query: 214 RRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEAS 273
R L +++ +LD+ + YL+ VHRD+ N+L+ + K++DFG+ + EAS
Sbjct: 101 GRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EAS 159
Query: 274 NPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSEVTSA 332
+ D TG+ + + APE L +A++ K DV+SFGI LWEIY +PYP + +V
Sbjct: 160 STQD-TGKL-PVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 217
Query: 333 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDT 380
V + + + P CP ++ VMK CW + RP ++ LE I T
Sbjct: 218 -VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 264
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 141/284 (49%), Gaps = 37/284 (13%)
Query: 108 ARGTFGTVHRG--IYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
+G FG VH+G + D VA+K L G+ E E+ F +EV + L+HPN+
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDS--EGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K G + V+E+ G L L+ ++ + + V ++
Sbjct: 86 VKLYGLMHNPPRM------------------VMEFVPCGDLYHRLL-DKAHPIKWSVKLR 126
Query: 226 LALDLARGLSYLQSKK--IVHRDVKTENMLL---DKTRTV--KIADFGVARLEASNPHDM 278
L LD+A G+ Y+Q++ IVHRD+++ N+ L D+ V K+ADFG+++ + H +
Sbjct: 127 LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---QSVHSV 183
Query: 279 TGETGTLGYMAPEVLNGS--AYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEV--TSAVV 334
+G G +MAPE + +Y K D YSF + L+ I + P+ + S+ ++ + +
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243
Query: 335 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ LRP IP CP L NV++ CW +P KRP +V L +
Sbjct: 244 EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 140/284 (49%), Gaps = 37/284 (13%)
Query: 108 ARGTFGTVHRG--IYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
+G FG VH+G + D VA+K L G+ E E+ F +EV + L+HPN+
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDS--EGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K G + V+E+ G L L+ ++ + + V ++
Sbjct: 86 VKLYGLMHNPPRM------------------VMEFVPCGDLYHRLL-DKAHPIKWSVKLR 126
Query: 226 LALDLARGLSYLQSKK--IVHRDVKTENMLL---DKTRTV--KIADFGVARLEASNPHDM 278
L LD+A G+ Y+Q++ IVHRD+++ N+ L D+ V K+ADFG ++ + H +
Sbjct: 127 LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---QSVHSV 183
Query: 279 TGETGTLGYMAPEVLNGS--AYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEV--TSAVV 334
+G G +MAPE + +Y K D YSF + L+ I + P+ + S+ ++ + +
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243
Query: 335 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ LRP IP CP L NV++ CW +P KRP +V L +
Sbjct: 244 EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 137/295 (46%), Gaps = 41/295 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+WE++ + +K G +G V+ G++ + V + E++ E F +
Sbjct: 26 KWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE--------FLK 77
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E AV ++ HPN+ + +G I V EY G L YL +
Sbjct: 78 EAAVMKEIKHPNLVQLLGVCTLEPPFYI----------------VTEYMPYGNLLDYLRE 121
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R ++ V++ +A ++ + YL+ K +HRD+ N L+ + VK+ADFG++RL
Sbjct: 122 CNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRL-- 179
Query: 273 SNPHDMTGETGT--------LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
MTG+T T + + APE L + ++ K DV++FG+ LWEI M PYP
Sbjct: 180 -----MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 234
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ S+V ++ + R E P CP + +M+ CW +P RP E E +
Sbjct: 235 IDLSQVYD-LLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 138/290 (47%), Gaps = 35/290 (12%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQE 153
W ++ +L + +G FG V G Y G VAVK + +++A AF E
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-------KNDATAQ----AFLAE 64
Query: 154 VAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN 213
+V +L H N+ + +G I + G + +V EY G+L YL
Sbjct: 65 ASVMTQLRHSNLVQLLGV--------IVEEKGGL-------YIVTEYMAKGSLVDYLRSR 109
Query: 214 RRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEAS 273
R L +++ +LD+ + YL+ VHRD+ N+L+ + K++DFG+ + EAS
Sbjct: 110 GRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EAS 168
Query: 274 NPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSEVT 330
+ D TG L + APE L ++ K DV+SFGI LWEIY +PYP + +V
Sbjct: 169 STQD----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 224
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDT 380
V + + + P CP ++ VMK CW + RP ++ LE I T
Sbjct: 225 PR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 139/290 (47%), Gaps = 35/290 (12%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQE 153
W ++ +L + +G FG V G Y G VAVK + +++A AF E
Sbjct: 188 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-------KNDATAQ----AFLAE 236
Query: 154 VAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN 213
+V +L H N+ + +G I + G + +V EY G+L YL
Sbjct: 237 ASVMTQLRHSNLVQLLGV--------IVEEKGGL-------YIVTEYMAKGSLVDYLRSR 281
Query: 214 RRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEAS 273
R L +++ +LD+ + YL+ VHRD+ N+L+ + K++DFG+ + EAS
Sbjct: 282 GRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EAS 340
Query: 274 NPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSEVT 330
+ D TG L + APE L ++ K DV+SFGI LWEIY +PYP + +V
Sbjct: 341 STQD----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 396
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDT 380
V + + + P CP ++ +VMK CW + RP ++ LE I T
Sbjct: 397 PR-VEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 140/284 (49%), Gaps = 37/284 (13%)
Query: 108 ARGTFGTVHRG--IYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
+G FG VH+G + D VA+K L G+ E E+ F +EV + L+HPN+
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDS--EGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K G + V+E+ G L L+ ++ + + V ++
Sbjct: 86 VKLYGLMHNPPRM------------------VMEFVPCGDLYHRLL-DKAHPIKWSVKLR 126
Query: 226 LALDLARGLSYLQSKK--IVHRDVKTENMLL---DKTRTV--KIADFGVARLEASNPHDM 278
L LD+A G+ Y+Q++ IVHRD+++ N+ L D+ V K+ADF +++ + H +
Sbjct: 127 LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---QSVHSV 183
Query: 279 TGETGTLGYMAPEVLNGS--AYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEV--TSAVV 334
+G G +MAPE + +Y K D YSF + L+ I + P+ + S+ ++ + +
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243
Query: 335 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ LRP IP CP L NV++ CW +P KRP +V L +
Sbjct: 244 EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 139/288 (48%), Gaps = 31/288 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQE 153
W ++ +L + +G FG V G Y G VAVK + +++A AF E
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-------KNDATAQ----AFLAE 49
Query: 154 VAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN 213
+V +L H N+ + +G I + G + +V EY G+L YL
Sbjct: 50 ASVMTQLRHSNLVQLLGV--------IVEEKGGL-------YIVTEYMAKGSLVDYLRSR 94
Query: 214 RRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEAS 273
R L +++ +LD+ + YL+ VHRD+ N+L+ + K++DFG+ + EAS
Sbjct: 95 GRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EAS 153
Query: 274 NPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSEVTSA 332
+ D TG+ + + APE L ++ K DV+SFGI LWEIY +PYP + +V
Sbjct: 154 STQD-TGKL-PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 211
Query: 333 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDT 380
V + + + P CP ++ VMK CW + RP ++ LE I T
Sbjct: 212 -VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 258
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 132/299 (44%), Gaps = 31/299 (10%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFT 151
EWE+ L + G FG V G Y+G VAVK L G S AF
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----------DAFL 66
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E + +L H + + ++ EY G+L +L
Sbjct: 67 AEANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLK 109
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
KL ++ +A +A G+++++ + +HRD++ N+L+ T + KIADFG+ARL
Sbjct: 110 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 169
Query: 272 ASNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 329
N + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 170 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 229
Query: 330 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMIP 388
+ R R P CP L +M+ CW P+ RP D + ++LE T+ G P
Sbjct: 230 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 287
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 142/309 (45%), Gaps = 49/309 (15%)
Query: 98 PAKLIIKGAFARGTFG----TVHRGIYDGQDVAVK-LLDWGEESHRSEAEIASLRAAFTQ 152
P+ LI +G FG HR G+ + +K L+ + EE+ R+ F +
Sbjct: 9 PSDLIHGEVLGKGCFGQAIKVTHRET--GEVMVMKELIRFDEETQRT----------FLK 56
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV V L+HPNV KFIG LN + EY GG L+ +IK
Sbjct: 57 EVKVMRCLEHPNVLKFIGVLYKDKRLNF----------------ITEYIKGGTLRG-IIK 99
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARL-- 270
+ + + + A D+A G++YL S I+HRD+ + N L+ + + V +ADFG+ARL
Sbjct: 100 SMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159
Query: 271 -EASNPHDMTG-----------ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD 318
E + P + G +MAPE++NG +Y+ K DV+SFGI L EI
Sbjct: 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219
Query: 319 MPYPD-LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEA 377
PD L + VR L P CP S + RC D +P+KRP ++ LE
Sbjct: 220 NADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLET 279
Query: 378 IDTSKGGGM 386
+ G +
Sbjct: 280 LRMHLAGHL 288
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 133/301 (44%), Gaps = 35/301 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFT 151
EWE+ L + G FG V G Y+G VAVK L G S AF
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----------DAFL 65
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E + +L H + + ++ EY G+L +L
Sbjct: 66 AEANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLK 108
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
KL ++ +A +A G+++++ + +HRD++ N+L+ T + KIADFG+ARL
Sbjct: 109 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 168
Query: 272 ASNPHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFS 327
N + T G + + APE +N + K DV+SFGI L EI +PYP ++
Sbjct: 169 EDN--EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 226
Query: 328 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMI 387
EV + R R P CP L +M+ CW P+ RP D + ++LE T+ G
Sbjct: 227 EVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQFQ 285
Query: 388 P 388
P
Sbjct: 286 P 286
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 133/301 (44%), Gaps = 35/301 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFT 151
EWE+ L + G FG V G Y+G VAVK L G S AF
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----------DAFL 62
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E + +L H + + ++ EY G+L +L
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLK 105
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
KL ++ +A +A G+++++ + +HRD++ N+L+ T + KIADFG+ARL
Sbjct: 106 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 165
Query: 272 ASNPHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFS 327
N + T G + + APE +N + K DV+SFGI L EI +PYP ++
Sbjct: 166 EDN--EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 223
Query: 328 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMI 387
EV + R R P CP L +M+ CW P+ RP D + ++LE T+ G
Sbjct: 224 EVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQ 282
Query: 388 P 388
P
Sbjct: 283 P 283
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 133/301 (44%), Gaps = 35/301 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFT 151
EWE+ L + G FG V G Y+G VAVK L G S AF
Sbjct: 15 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----------DAFL 64
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E + +L H + + ++ EY G+L +L
Sbjct: 65 AEANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLK 107
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
KL ++ +A +A G+++++ + +HRD++ N+L+ T + KIADFG+ARL
Sbjct: 108 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 167
Query: 272 ASNPHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFS 327
N + T G + + APE +N + K DV+SFGI L EI +PYP ++
Sbjct: 168 EDN--EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 225
Query: 328 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMI 387
EV + R R P CP L +M+ CW P+ RP D + ++LE T+ G
Sbjct: 226 EVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQ 284
Query: 388 P 388
P
Sbjct: 285 P 285
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 32/295 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEIDP L G FG V G + GQ DVA+K++ +E SE E F +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDE-------FIE 53
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V L H + + G + I + EY G L +YL +
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCTKQRPIFI----------------ITEYMANGCLLNYL-R 96
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R + + ++++ D+ + YL+SK+ +HRD+ N L++ VK++DFG++R
Sbjct: 97 EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 156
Query: 273 SNPHDMT-GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVT 330
+ + + G + + PEVL S ++ K D+++FG+ +WEIY MPY + SE T
Sbjct: 157 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-T 215
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA-MLEAIDTSKGG 384
+ + Q LR P + +M CW D+RP +++ +L+ +D + G
Sbjct: 216 AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDENLYG 270
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 139/287 (48%), Gaps = 31/287 (10%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQE 153
E+ ++ + G FG V G + GQ DVAVK++ +E SE E F QE
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI---KEGSMSEDE-------FFQE 53
Query: 154 VAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN 213
KL HP + KF G + E I +V EY G L +YL ++
Sbjct: 54 AQTMMKLSHPKLVKFYGVC--SKEYPIY--------------IVTEYISNGCLLNYL-RS 96
Query: 214 RRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEAS 273
+ L ++++ D+ G+++L+S + +HRD+ N L+D+ VK++DFG+ R
Sbjct: 97 HGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156
Query: 274 NPH-DMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTS 331
+ + G + + APEV + Y+ K DV++FGI +WE++ MPY + SEV
Sbjct: 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL 216
Query: 332 AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
V Q R P ++ +M CW P+KRP ++++ +E +
Sbjct: 217 K-VSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 133/301 (44%), Gaps = 35/301 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFT 151
EWE+ L + G FG V G Y+G VAVK L G S AF
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----------DAFL 56
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E + +L H + + ++ EY G+L +L
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLK 99
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
KL ++ +A +A G+++++ + +HRD++ N+L+ T + KIADFG+ARL
Sbjct: 100 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159
Query: 272 ASNPHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFS 327
N + T G + + APE +N + K DV+SFGI L EI +PYP ++
Sbjct: 160 EDN--EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217
Query: 328 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMI 387
EV + R R P CP L +M+ CW P+ RP D + ++LE T+ G
Sbjct: 218 EVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQ 276
Query: 388 P 388
P
Sbjct: 277 P 277
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 32/290 (11%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEIDP L G FG V G + GQ DVA+K++ +E SE E F +
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDE-------FIE 59
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V L H + + G + I + EY G L +YL +
Sbjct: 60 EAKVMMNLSHEKLVQLYGVCTKQRPIFI----------------ITEYMANGCLLNYL-R 102
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R + + ++++ D+ + YL+SK+ +HRD+ N L++ VK++DFG++R
Sbjct: 103 EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 162
Query: 273 SNPHDMT-GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVT 330
+ + + G + + PEVL S ++ K D+++FG+ +WEIY MPY + SE T
Sbjct: 163 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-T 221
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA-MLEAID 379
+ + Q LR P + +M CW D+RP +++ +L+ +D
Sbjct: 222 AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ G FG V Y+ VAVK + G S AF
Sbjct: 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE----------AFLA 232
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V L H + K H + ++ E+ G+L +L
Sbjct: 233 EANVMKTLQHDKLVKL-----------------HAVVTKEPIYIITEFMAKGSLLDFLKS 275
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ K +I + +A G+++++ + +HRD++ N+L+ + KIADFG+AR+
Sbjct: 276 DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE 335
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSEVT 330
N + G + + APE +N ++ K DV+SFGI L EI +PYP +S EV
Sbjct: 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
A+ R P P CP L N+M RCW P++RP + + ++L+ T+
Sbjct: 396 RALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 32/290 (11%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEIDP L G FG V G + GQ DVA+K++ +E SE E F +
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDE-------FIE 52
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V L H + + G + I + EY G L +YL +
Sbjct: 53 EAKVMMNLSHEKLVQLYGVCTKQRPIFI----------------ITEYMANGCLLNYL-R 95
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R + + ++++ D+ + YL+SK+ +HRD+ N L++ VK++DFG++R
Sbjct: 96 EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 155
Query: 273 SNPHDMT-GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVT 330
+ + + G + + PEVL S ++ K D+++FG+ +WEIY MPY + SE T
Sbjct: 156 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-T 214
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA-MLEAID 379
+ + Q LR P + +M CW D+RP +++ +L+ +D
Sbjct: 215 AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 264
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 32/290 (11%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEIDP L G FG V G + GQ DVA+K++ +E SE E F +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDE-------FIE 53
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V L H + + G + I + EY G L +YL +
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCTKQRPIFI----------------ITEYMANGCLLNYL-R 96
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R + + ++++ D+ + YL+SK+ +HRD+ N L++ VK++DFG++R
Sbjct: 97 EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 156
Query: 273 SNPHDMT-GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVT 330
+ + + G + + PEVL S ++ K D+++FG+ +WEIY MPY + SE T
Sbjct: 157 DDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-T 215
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA-MLEAID 379
+ + Q LR P + +M CW D+RP +++ +L+ +D
Sbjct: 216 AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 32/290 (11%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEIDP L G FG V G + GQ DVA+K++ +E SE E F +
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDE-------FIE 68
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V L H + + G + I + EY G L +YL +
Sbjct: 69 EAKVMMNLSHEKLVQLYGVCTKQRPIFI----------------ITEYMANGCLLNYL-R 111
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R + + ++++ D+ + YL+SK+ +HRD+ N L++ VK++DFG++R
Sbjct: 112 EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171
Query: 273 SNPHDMT-GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVT 330
+ + + G + + PEVL S ++ K D+++FG+ +WEIY MPY + SE T
Sbjct: 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-T 230
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA-MLEAID 379
+ + Q LR P + +M CW D+RP +++ +L+ +D
Sbjct: 231 AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ G FG V Y+ VAVK + G S AF
Sbjct: 177 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE----------AFLA 226
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V L H + K H + ++ E+ G+L +L
Sbjct: 227 EANVMKTLQHDKLVKL-----------------HAVVTKEPIYIITEFMAKGSLLDFLKS 269
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ K +I + +A G+++++ + +HRD++ N+L+ + KIADFG+AR+ A
Sbjct: 270 DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGA 329
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSEVTS 331
P + + APE +N ++ K DV+SFGI L EI +PYP +S EV
Sbjct: 330 KFP---------IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR 380
Query: 332 AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
A+ R P P CP L N+M RCW P++RP + + ++L+ T+
Sbjct: 381 ALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 429
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 130/292 (44%), Gaps = 31/292 (10%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFT 151
EWE+ L + G FG V G Y+G VAVK L G S AF
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----------DAFL 62
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E + +L H + + ++ EY G+L +L
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLK 105
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
KL ++ +A +A G+++++ + +HRD++ N+L+ T + KIADFG+ARL
Sbjct: 106 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 165
Query: 272 ASNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 329
N + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 166 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
Query: 330 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+ R R P CP L +M+ CW P+ RP D + ++LE T+
Sbjct: 226 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 276
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 130/292 (44%), Gaps = 31/292 (10%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFT 151
EWE+ L + G FG V G Y+G VAVK L G S AF
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD----------AFL 51
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E + +L H + + ++ EY G+L +L
Sbjct: 52 AEANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLK 94
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
KL ++ +A +A G+++++ + +HRD++ N+L+ T + KIADFG+ARL
Sbjct: 95 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 154
Query: 272 ASNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 329
N + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 155 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 214
Query: 330 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+ R R P CP L +M+ CW P+ RP D + ++LE T+
Sbjct: 215 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 265
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 130/292 (44%), Gaps = 31/292 (10%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFT 151
EWE+ L + G FG V G Y+G VAVK L G S AF
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----------DAFL 61
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E + +L H + + ++ EY G+L +L
Sbjct: 62 AEANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLK 104
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
KL ++ +A +A G+++++ + +HRD++ N+L+ T + KIADFG+ARL
Sbjct: 105 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 164
Query: 272 ASNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 329
N + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 165 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 224
Query: 330 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+ R R P CP L +M+ CW P+ RP D + ++LE T+
Sbjct: 225 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 275
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEIDP L G FG V G + GQ DVA+K++ +E SE E F +
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDE-------FIE 68
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V L H + + G + I + EY G L +YL +
Sbjct: 69 EAKVMMNLSHEKLVQLYGVCTKQRPIFI----------------ITEYMANGCLLNYL-R 111
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R + + ++++ D+ + YL+SK+ +HRD+ N L++ VK++DFG++R
Sbjct: 112 EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171
Query: 273 SNPHDMT-GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVT 330
+ + G + + PEVL S ++ K D+++FG+ +WEIY MPY + SE T
Sbjct: 172 DDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-T 230
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA-MLEAID 379
+ + Q LR P + +M CW D+RP +++ +L+ +D
Sbjct: 231 AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 129/286 (45%), Gaps = 31/286 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ G FG V Y+ VAVK + G S AF
Sbjct: 10 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE----------AFLA 59
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V L H + K H + ++ E+ G+L +L
Sbjct: 60 EANVMKTLQHDKLVKL-----------------HAVVTKEPIYIITEFMAKGSLLDFLKS 102
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ K +I + +A G+++++ + +HRD++ N+L+ + KIADFG+AR+
Sbjct: 103 DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE 162
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSEVT 330
N + G + + APE +N ++ K DV+SFGI L EI +PYP +S EV
Sbjct: 163 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
A+ R P P CP L N+M RCW P++RP + + ++L+
Sbjct: 223 RALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 130/292 (44%), Gaps = 31/292 (10%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFT 151
EWE+ L + G FG V G Y+G VAVK L G S AF
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----------DAFL 56
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E + +L H + + ++ EY G+L +L
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLK 99
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
KL ++ +A +A G+++++ + +HRD++ N+L+ T + KIADFG+ARL
Sbjct: 100 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159
Query: 272 ASNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 329
N + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 160 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 330 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+ R R P CP L +M+ CW P+ RP D + ++LE T+
Sbjct: 220 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 35/289 (12%)
Query: 106 AFARGTFGTVHRGIYDGQ-----DVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG V+ G Y Q A+K L E + EA F +E + L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA--------FLREGLLMRGL 79
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
+HPNV IG + L H+ +P CHG L+ I++ +R
Sbjct: 80 NHPNVLALIGIMLPPEGLP------HVLLPY--------MCHGDLLQ--FIRSPQRNPTV 123
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR----LEASNPH 276
K +I L +ARG+ YL +K VHRD+ N +LD++ TVK+ADFG+AR E +
Sbjct: 124 KDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183
Query: 277 DMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVR 335
+ + A E L + K DV+SFG+ LWE+ PY + ++T + +
Sbjct: 184 QHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ 243
Query: 336 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGG 384
P+ P CP SL VM++CW+A+P RP +V +E I ++ G
Sbjct: 244 GRRLPQ-PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 131/294 (44%), Gaps = 35/294 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFT 151
EWE+ L + G FG V G Y+G VAVK L G S AF
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----------DAFL 57
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E + +L H + + ++ EY G+L +L
Sbjct: 58 AEANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLK 100
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
KL ++ +A +A G+++++ + +HRD++ N+L+ T + KIADFG+ARL
Sbjct: 101 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 160
Query: 272 ASNPHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFS 327
N + T G + + APE +N + K DV+SFGI L EI +PYP ++
Sbjct: 161 EDN--EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 218
Query: 328 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
EV + R R P CP L +M+ CW P+ RP D + ++LE T+
Sbjct: 219 EVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 271
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 131/294 (44%), Gaps = 35/294 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFT 151
EWE+ L + G FG V G Y+G VAVK L G S AF
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD----------AFL 58
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E + +L H + + ++ EY G+L +L
Sbjct: 59 AEANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLK 101
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
KL ++ +A +A G+++++ + +HRD++ N+L+ T + KIADFG+ARL
Sbjct: 102 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 161
Query: 272 ASNPHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFS 327
N + T G + + APE +N + K DV+SFGI L EI +PYP ++
Sbjct: 162 EDN--EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 219
Query: 328 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
EV + R R P CP L +M+ CW P+ RP D + ++LE T+
Sbjct: 220 EVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 272
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 131/294 (44%), Gaps = 35/294 (11%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFT 151
EWE+ L + G FG V G Y+G VAVK L G S AF
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----------DAFL 56
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E + +L H + + ++ EY G+L +L
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLK 99
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
KL ++ +A +A G+++++ + +HRD++ N+L+ T + KIADFG+ARL
Sbjct: 100 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159
Query: 272 ASNPHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFS 327
N + T G + + APE +N + K DV+SFGI L EI +PYP ++
Sbjct: 160 EDN--EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217
Query: 328 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
EV + R R P CP L +M+ CW P+ RP D + ++LE T+
Sbjct: 218 EVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 130/292 (44%), Gaps = 31/292 (10%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFT 151
EWE+ L + G FG V G Y+G VAVK L G S AF
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD----------AFL 52
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E + +L H + + ++ EY G+L +L
Sbjct: 53 AEANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLK 95
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
KL ++ +A +A G+++++ + +HR+++ N+L+ T + KIADFG+ARL
Sbjct: 96 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLI 155
Query: 272 ASNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 329
N + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 156 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 215
Query: 330 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+ R R P CP L +M+ CW P+ RP D + ++LE T+
Sbjct: 216 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 266
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 139/304 (45%), Gaps = 47/304 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRG----IYDGQD---VAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G I G+ VAVK ++ E AS
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN----------ESAS 60
Query: 146 LR--AAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
LR F E +V +V + +G G P+ VV+E
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSK-------------GQPT---LVVMELMAH 104
Query: 204 GALKSYLIKNR--------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
G LKSYL R R + +IQ+A ++A G++YL +KK VHRD+ N ++
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA 164
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWE 313
TVKI DFG+ R G G L +MAPE L + D++SFG+ LWE
Sbjct: 165 HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
Query: 314 IY-CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
I + PY LS +V V+ + P CP + ++M+ CW NP+ RP E+V
Sbjct: 225 ITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
Query: 373 AMLE 376
+L+
Sbjct: 284 NLLK 287
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 139/304 (45%), Gaps = 47/304 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRG----IYDGQD---VAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G I G+ VAVK ++ E AS
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN----------ESAS 60
Query: 146 LR--AAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
LR F E +V +V + +G G P+ VV+E
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSK-------------GQPT---LVVMELMAH 104
Query: 204 GALKSYLIKNR--------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
G LKSYL R R + +IQ+A ++A G++YL +KK VHRD+ N ++
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA 164
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWE 313
TVKI DFG+ R + G G L +MAPE L + D++SFG+ LWE
Sbjct: 165 HDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
Query: 314 IY-CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
I + PY LS +V V+ + P CP + ++M+ CW NP RP E+V
Sbjct: 225 ITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 373 AMLE 376
+L+
Sbjct: 284 NLLK 287
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 138/304 (45%), Gaps = 47/304 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRG----IYDGQD---VAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G I G+ VAVK ++ E AS
Sbjct: 8 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN----------ESAS 57
Query: 146 LR--AAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
LR F E +V +V + +G G P+ VV+E
Sbjct: 58 LRERIEFLNEASVMKGFTCHHVVRLLGVVSK-------------GQPT---LVVMELMAH 101
Query: 204 GALKSYLIKNR--------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
G LKSYL R R + +IQ+A ++A G++YL +KK VHRD+ N ++
Sbjct: 102 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA 161
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWE 313
TVKI DFG+ R G G L +MAPE L + D++SFG+ LWE
Sbjct: 162 HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 221
Query: 314 IYC-CDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
I + PY LS +V V+ + P CP + ++M+ CW NP RP E+V
Sbjct: 222 ITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIV 280
Query: 373 AMLE 376
+L+
Sbjct: 281 NLLK 284
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 139/304 (45%), Gaps = 47/304 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRG----IYDGQD---VAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G I G+ VAVK ++ E AS
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN----------ESAS 60
Query: 146 LR--AAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
LR F E +V +V + +G G P+ VV+E
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSK-------------GQPT---LVVMELMAH 104
Query: 204 GALKSYLIKNR--------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
G LKSYL R R + +IQ+A ++A G++YL +KK VHRD+ N ++
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA 164
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWE 313
TVKI DFG+ R + G G L +MAPE L + D++SFG+ LWE
Sbjct: 165 HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
Query: 314 IY-CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
I + PY LS +V V+ + P CP + ++M+ CW NP RP E+V
Sbjct: 225 ITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 373 AMLE 376
+L+
Sbjct: 284 NLLK 287
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 138/300 (46%), Gaps = 45/300 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G+ G VA+K ++ EA
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--------EAASMR 60
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
R F E +V + + +V + +G G P+ V++E G
Sbjct: 61 ERIEFLNEASVMKEFNCHHVVRLLGVV-------------SQGQPT---LVIMELMTRGD 104
Query: 206 LKSYLIKNRRRKLA---------FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
LKSYL ++ R +A +IQ+A ++A G++YL + K VHRD+ N ++ +
Sbjct: 105 LKSYL-RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 163
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEI 314
TVKI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 164 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
Query: 315 -YCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ PY LS +V V+ L + P CP L +M+ CW NP RP E+++
Sbjct: 224 ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 282
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 138/304 (45%), Gaps = 47/304 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRG----IYDGQD---VAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G I G+ VAVK ++ E AS
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN----------ESAS 60
Query: 146 LR--AAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
LR F E +V +V + +G G P+ VV+E
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSK-------------GQPT---LVVMELMAH 104
Query: 204 GALKSYLIKNR--------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
G LKSYL R R + +IQ+A ++A G++YL +KK VHRD+ N ++
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA 164
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWE 313
TVKI DFG+ R G G L +MAPE L + D++SFG+ LWE
Sbjct: 165 HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
Query: 314 IY-CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
I + PY LS +V V+ + P CP + ++M+ CW NP RP E+V
Sbjct: 225 ITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 373 AMLE 376
+L+
Sbjct: 284 NLLK 287
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 138/300 (46%), Gaps = 45/300 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G+ G VA+K ++ EA
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--------EAASMR 55
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
R F E +V + + +V + +G G P+ V++E G
Sbjct: 56 ERIEFLNEASVMKEFNCHHVVRLLGVV-------------SQGQPT---LVIMELMTRGD 99
Query: 206 LKSYLIKNRRRKL---------AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
LKSYL ++ R ++ + +IQ+A ++A G++YL + K VHRD+ N ++ +
Sbjct: 100 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 158
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEI 314
TVKI DFG+ R G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 159 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
Query: 315 -YCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ PY LS +V V+ L + P CP L +M+ CW NP RP E+++
Sbjct: 219 ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIIS 277
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G+ G VA+K ++ EA
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--------EAASMR 57
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
R F E +V + + +V + +G G P+ V++E G
Sbjct: 58 ERIEFLNEASVMKEFNCHHVVRLLGVV-------------SQGQPT---LVIMELMTRGD 101
Query: 206 LKSYLIKNRRRKL---------AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
LKSYL ++ R ++ + +IQ+A ++A G++YL + K VHRD+ N ++ +
Sbjct: 102 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 160
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEI 314
TVKI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 161 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
Query: 315 -YCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ PY LS +V V+ L + P CP L +M+ CW NP RP E+++
Sbjct: 221 ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 279
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 138/300 (46%), Gaps = 45/300 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G+ G VA+K ++ EA
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--------EAASMR 70
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
R F E +V + + +V + +G G P+ V++E G
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVV-------------SQGQPT---LVIMELMTRGD 114
Query: 206 LKSYLIKNRRRKLA---------FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
LKSYL ++ R +A +IQ+A ++A G++YL + K VHRD+ N ++ +
Sbjct: 115 LKSYL-RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 173
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEI 314
TVKI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
Query: 315 -YCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ PY LS +V V+ L + P CP L +M+ CW NP RP E+++
Sbjct: 234 ATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 292
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 138/300 (46%), Gaps = 45/300 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G+ G VA+K ++ EA
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--------EAASMR 64
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
R F E +V + + +V + +G G P+ V++E G
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVV-------------SQGQPT---LVIMELMTRGD 108
Query: 206 LKSYLIKNRRRKL---------AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
LKSYL ++ R ++ + +IQ+A ++A G++YL + K VHRD+ N ++ +
Sbjct: 109 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 167
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEI 314
TVKI DFG+ R G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 168 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
Query: 315 -YCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ PY LS +V V+ L + P CP L +M+ CW NP RP E+++
Sbjct: 228 ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 286
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G+ G VA+K ++ EA
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--------EAASMR 63
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
R F E +V + + +V + +G G P+ V++E G
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVV-------------SQGQPT---LVIMELMTRGD 107
Query: 206 LKSYLIKNRRRKL---------AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
LKSYL ++ R ++ + +IQ+A ++A G++YL + K VHRD+ N ++ +
Sbjct: 108 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 166
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEI 314
TVKI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 167 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
Query: 315 -YCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ PY LS +V V+ L + P CP L +M+ CW NP RP E+++
Sbjct: 227 ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 285
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G+ G VA+K ++ EA
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--------EAASMR 64
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
R F E +V + + +V + +G G P+ V++E G
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVV-------------SQGQPT---LVIMELMTRGD 108
Query: 206 LKSYLIKNRRRKL---------AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
LKSYL ++ R ++ + +IQ+A ++A G++YL + K VHRD+ N ++ +
Sbjct: 109 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 167
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEI 314
TVKI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 168 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
Query: 315 -YCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ PY LS +V V+ L + P CP L +M+ CW NP RP E+++
Sbjct: 228 ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 286
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G+ G VA+K ++ EA
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--------EAASMR 61
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
R F E +V + + +V + +G G P+ V++E G
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVV-------------SQGQPT---LVIMELMTRGD 105
Query: 206 LKSYLIKNRRRKL---------AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
LKSYL ++ R ++ + +IQ+A ++A G++YL + K VHRD+ N ++ +
Sbjct: 106 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 164
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEI 314
TVKI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 165 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
Query: 315 -YCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ PY LS +V V+ L + P CP L +M+ CW NP RP E+++
Sbjct: 225 ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 283
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G+ G VA+K ++ EA
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--------EAASMR 92
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
R F E +V + + +V + +G G P+ V++E G
Sbjct: 93 ERIEFLNEASVMKEFNCHHVVRLLGVV-------------SQGQPT---LVIMELMTRGD 136
Query: 206 LKSYLIKNRRRKL---------AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
LKSYL ++ R ++ + +IQ+A ++A G++YL + K VHRD+ N ++ +
Sbjct: 137 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 195
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEI 314
TVKI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 196 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
Query: 315 -YCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ PY LS +V V+ L + P CP L +M+ CW NP RP E+++
Sbjct: 256 ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 314
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G+ G VA+K ++ EA
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--------EAASMR 63
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
R F E +V + + +V + +G G P+ V++E G
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVV-------------SQGQPT---LVIMELMTRGD 107
Query: 206 LKSYLIKNRRRKL---------AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
LKSYL ++ R ++ + +IQ+A ++A G++YL + K VHRD+ N ++ +
Sbjct: 108 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 166
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEI 314
TVKI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 167 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
Query: 315 -YCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ PY LS +V V+ L + P CP L +M+ CW NP RP E+++
Sbjct: 227 ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 285
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G+ G VA+K ++ EA
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--------EAASMR 70
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
R F E +V + + +V + +G G P+ V++E G
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVV-------------SQGQPT---LVIMELMTRGD 114
Query: 206 LKSYLIKNRRRKL---------AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
LKSYL ++ R ++ + +IQ+A ++A G++YL + K VHRD+ N ++ +
Sbjct: 115 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 173
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEI 314
TVKI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
Query: 315 -YCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ PY LS +V V+ L + P CP L +M+ CW NP RP E+++
Sbjct: 234 ATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 292
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 140/304 (46%), Gaps = 47/304 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRG----IYDGQD---VAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G I G+ VAVK ++ E AS
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN----------ESAS 60
Query: 146 LR--AAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
LR F E +V +V + +G G P+ VV+E
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSK-------------GQPT---LVVMELMAH 104
Query: 204 GALKSYLIKNR--------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
G LKSYL R R + +IQ+A ++A G++YL +KK VHR++ N ++
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVA 164
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWE 313
TVKI DFG+ R + G G L +MAPE L + D++SFG+ LWE
Sbjct: 165 HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
Query: 314 IY-CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
I + PY LS +V V+ + P CP + ++M+ CW NP+ RP E+V
Sbjct: 225 ITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
Query: 373 AMLE 376
+L+
Sbjct: 284 NLLK 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 140/304 (46%), Gaps = 47/304 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRG----IYDGQD---VAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G I G+ VAVK ++ E AS
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN----------ESAS 61
Query: 146 LR--AAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
LR F E +V +V + +G G P+ VV+E
Sbjct: 62 LRERIEFLNEASVMKGFTCHHVVRLLGVVSK-------------GQPT---LVVMELMAH 105
Query: 204 GALKSYLIKNR--------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
G LKSYL R R + +IQ+A ++A G++YL +KK VHR++ N ++
Sbjct: 106 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVA 165
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWE 313
TVKI DFG+ R + G G L +MAPE L + D++SFG+ LWE
Sbjct: 166 HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 225
Query: 314 IY-CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
I + PY LS +V V+ + P CP + ++M+ CW NP+ RP E+V
Sbjct: 226 ITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIV 284
Query: 373 AMLE 376
+L+
Sbjct: 285 NLLK 288
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 134/291 (46%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 62
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V+EY G+L +L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVIEYMSKGSLLDFLKG 105
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW +P++RP + + A LE TS
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 139/312 (44%), Gaps = 51/312 (16%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIA 144
+WE +L G FG V G VAVK+L +H +E
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTE---- 92
Query: 145 SLRAAFTQEVAVWHKL-DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
R A E+ V L +H N+ +GA IG P+ V+ EYC
Sbjct: 93 --REALMSELKVLSYLGNHMNIVNLLGACT-------------IGGPT---LVITEYCCY 134
Query: 204 GALKSYLIKNRRRKLAFKV----------------VIQLALDLARGLSYLQSKKIVHRDV 247
G L ++L + R + K ++ + +A+G+++L SK +HRD+
Sbjct: 135 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDL 194
Query: 248 KTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVY 305
N+LL R KI DFG+AR ++ + + L +MAPE + Y + DV+
Sbjct: 195 AARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 254
Query: 306 SFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDK 364
S+GI LWE++ PYP + ++++ R P P+ + ++MK CWDA+P K
Sbjct: 255 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK 314
Query: 365 RPEMDEVVAMLE 376
RP ++V ++E
Sbjct: 315 RPTFKQIVQLIE 326
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 138/300 (46%), Gaps = 45/300 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIAS 145
EWE+ K+ + +G+FG V+ G+ G VA+K ++ EA
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--------EAASMR 57
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
R F E +V + + +V + +G G P+ V++E G
Sbjct: 58 ERIEFLNEASVMKEFNCHHVVRLLGVV-------------SQGQPT---LVIMELMTRGD 101
Query: 206 LKSYLIKNRRRKL---------AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
LKSYL ++ R ++ + +IQ+A ++A G++YL + K VHRD+ N + +
Sbjct: 102 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAE 160
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEI 314
TVKI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 161 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
Query: 315 -YCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ PY LS +V V+ L + P CP L +M+ CW NP RP E+++
Sbjct: 221 ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIIS 279
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 139/312 (44%), Gaps = 51/312 (16%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIA 144
+WE +L G FG V G VAVK+L +H +E
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTE---- 92
Query: 145 SLRAAFTQEVAVWHKL-DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
R A E+ V L +H N+ +GA IG P+ V+ EYC
Sbjct: 93 --REALMSELKVLSYLGNHMNIVNLLGACT-------------IGGPT---LVITEYCCY 134
Query: 204 GALKSYLIKNRRRKLAFKV----------------VIQLALDLARGLSYLQSKKIVHRDV 247
G L ++L + R + K ++ + +A+G+++L SK +HRD+
Sbjct: 135 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDL 194
Query: 248 KTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVY 305
N+LL R KI DFG+AR ++ + + L +MAPE + Y + DV+
Sbjct: 195 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 254
Query: 306 SFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDK 364
S+GI LWE++ PYP + ++++ R P P+ + ++MK CWDA+P K
Sbjct: 255 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK 314
Query: 365 RPEMDEVVAMLE 376
RP ++V ++E
Sbjct: 315 RPTFKQIVQLIE 326
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 139/312 (44%), Gaps = 51/312 (16%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIA 144
+WE +L G FG V G VAVK+L +H +E
Sbjct: 16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTE---- 69
Query: 145 SLRAAFTQEVAVWHKL-DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
R A E+ V L +H N+ +GA IG P+ V+ EYC
Sbjct: 70 --REALMSELKVLSYLGNHMNIVNLLGACT-------------IGGPT---LVITEYCCY 111
Query: 204 GALKSYLIKNRRRKLAFKV----------------VIQLALDLARGLSYLQSKKIVHRDV 247
G L ++L + R + K ++ + +A+G+++L SK +HRD+
Sbjct: 112 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDL 171
Query: 248 KTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVY 305
N+LL R KI DFG+AR ++ + + L +MAPE + Y + DV+
Sbjct: 172 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 231
Query: 306 SFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDK 364
S+GI LWE++ PYP + ++++ R P P+ + ++MK CWDA+P K
Sbjct: 232 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK 291
Query: 365 RPEMDEVVAMLE 376
RP ++V ++E
Sbjct: 292 RPTFKQIVQLIE 303
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 135/294 (45%), Gaps = 30/294 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI + + G FG V G Y+ VAVK L G S + AF +
Sbjct: 8 WEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ----------AFLE 57
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E + L H + + + I + EY G+L +L
Sbjct: 58 EANLMKTLQHDKLVRLYAVVTREEPIYI----------------ITEYMAKGSLLDFLKS 101
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ K+ +I + +A G++Y++ K +HRD++ N+L+ ++ KIADFG+AR+
Sbjct: 102 DEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE 161
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVT 330
N + G + + APE +N + K DV+SFGI L+EI +PYP + ++V
Sbjct: 162 DNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVM 221
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGG 384
+A+ + P + CP L ++MK CW ++RP D + ++L+ T+ G
Sbjct: 222 TALSQGYRMPRVEN-CPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEG 274
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 139/312 (44%), Gaps = 51/312 (16%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIA 144
+WE +L G FG V G VAVK+L +H +E
Sbjct: 32 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTE---- 85
Query: 145 SLRAAFTQEVAVWHKL-DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
R A E+ V L +H N+ +GA IG P+ V+ EYC
Sbjct: 86 --REALMSELKVLSYLGNHMNIVNLLGACT-------------IGGPT---LVITEYCCY 127
Query: 204 GALKSYLIKNRRRKLAFKV----------------VIQLALDLARGLSYLQSKKIVHRDV 247
G L ++L + R + K ++ + +A+G+++L SK +HRD+
Sbjct: 128 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDL 187
Query: 248 KTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVY 305
N+LL R KI DFG+AR ++ + + L +MAPE + Y + DV+
Sbjct: 188 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 247
Query: 306 SFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDK 364
S+GI LWE++ PYP + ++++ R P P+ + ++MK CWDA+P K
Sbjct: 248 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK 307
Query: 365 RPEMDEVVAMLE 376
RP ++V ++E
Sbjct: 308 RPTFKQIVQLIE 319
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 128/305 (41%), Gaps = 44/305 (14%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-------VAVKLLDWGEESHRSEAEIAS 145
+WE +L + RG FG V G D VAVK+L G A +
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEG-------ATHSE 75
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
RA ++ + H H NV +GA P V+VE+C G
Sbjct: 76 HRALMSELKILIHIGHHLNVVNLLGACTK---------------PGGPLMVIVEFCKFGN 120
Query: 206 LKSYLIKNRRRKLAFKV------------VIQLALDLARGLSYLQSKKIVHRDVKTENML 253
L +YL R + +K +I + +A+G+ +L S+K +HRD+ N+L
Sbjct: 121 LSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNIL 180
Query: 254 LDKTRTVKIADFGVARLEASNPHDMTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGICL 311
L + VKI DFG+AR +P + L +MAPE + Y + DV+SFG+ L
Sbjct: 181 LSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 312 WEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDE 370
WEI+ PYP + E +++ R P + M CW P +RP E
Sbjct: 241 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 300
Query: 371 VVAML 375
+V L
Sbjct: 301 LVEHL 305
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 139/312 (44%), Gaps = 51/312 (16%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIA 144
+WE +L G FG V G VAVK+L +H +E
Sbjct: 34 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTE---- 87
Query: 145 SLRAAFTQEVAVWHKL-DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
R A E+ V L +H N+ +GA IG P+ V+ EYC
Sbjct: 88 --REALMSELKVLSYLGNHMNIVNLLGACT-------------IGGPT---LVITEYCCY 129
Query: 204 GALKSYLIKNRRRKLAFKV----------------VIQLALDLARGLSYLQSKKIVHRDV 247
G L ++L + R + K ++ + +A+G+++L SK +HRD+
Sbjct: 130 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDL 189
Query: 248 KTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVY 305
N+LL R KI DFG+AR ++ + + L +MAPE + Y + DV+
Sbjct: 190 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 249
Query: 306 SFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDK 364
S+GI LWE++ PYP + ++++ R P P+ + ++MK CWDA+P K
Sbjct: 250 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK 309
Query: 365 RPEMDEVVAMLE 376
RP ++V ++E
Sbjct: 310 RPTFKQIVQLIE 321
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 128/303 (42%), Gaps = 42/303 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-------VAVKLLDWGEESHRSEAEIAS 145
+WE +L + RG FG V G D VAVK+L G A ++
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 80
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
L+ H H NV +GA P V+VE+C G
Sbjct: 81 LKILI-------HIGHHLNVVNLLGACTK---------------PGGPLMVIVEFCKFGN 118
Query: 206 LKSYLIKNRRRKLAFK----------VVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
L +YL R + +K +I + +A+G+ +L S+K +HRD+ N+LL
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS 178
Query: 256 KTRTVKIADFGVARLEASNP-HDMTGETGT-LGYMAPEVLNGSAYNRKCDVYSFGICLWE 313
+ VKI DFG+AR +P + G+ L +MAPE + Y + DV+SFG+ LWE
Sbjct: 179 EKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 238
Query: 314 IYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
I+ PYP + E +++ R P + M CW P +RP E+V
Sbjct: 239 IFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298
Query: 373 AML 375
L
Sbjct: 299 EHL 301
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 135/293 (46%), Gaps = 35/293 (11%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 62
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V+EY G+L +L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVIEYMSKGSLLDFLKG 105
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 273 SNPHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSE 328
N + T G + + APE + K DV+SFGI L E+ +PYP + E
Sbjct: 166 DN--EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 329 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V V R R P CP SL ++M +CW +P++RP + + A LE TS
Sbjct: 224 VLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 127/307 (41%), Gaps = 46/307 (14%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-------VAVKLLDWGEESHRSEAEIAS 145
+WE +L + RG FG V G D VAVK+L G A ++
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
L+ H H NV +GA P V+VE+C G
Sbjct: 72 LKILI-------HIGHHLNVVNLLGACTK---------------PGGPLMVIVEFCKFGN 109
Query: 206 LKSYLIKNRRRKLAFKV--------------VIQLALDLARGLSYLQSKKIVHRDVKTEN 251
L +YL R + +KV +I + +A+G+ +L S+K +HRD+ N
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 169
Query: 252 MLLDKTRTVKIADFGVARLEASNPHDMTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGI 309
+LL + VKI DFG+AR +P + L +MAPE + Y + DV+SFG+
Sbjct: 170 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 229
Query: 310 CLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEM 368
LWEI+ PYP + E +++ R P + M CW P +RP
Sbjct: 230 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 289
Query: 369 DEVVAML 375
E+V L
Sbjct: 290 SELVEHL 296
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 130/298 (43%), Gaps = 31/298 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WE+ L + G G V G Y+G VAVK L G S AF
Sbjct: 8 WEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD----------AFLA 57
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E + +L H + + ++ EY G+L +L
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLKT 100
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARL-E 271
KL ++ +A +A G+++++ + +HRD++ N+L+ T + KIADFG+ARL E
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 272 ASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
+ G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 161 DAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMIP 388
+ R R P CP L +M+ CW P+ RP D + ++LE T+ G P
Sbjct: 221 QNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 277
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 133/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 62
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY G+L +L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVTEYMSKGSLLDFLKG 105
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW +P++RP + + A LE TS
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 127/307 (41%), Gaps = 46/307 (14%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-------VAVKLLDWGEESHRSEAEIAS 145
+WE +L + RG FG V G D VAVK+L G A ++
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
L+ H H NV +GA P V+VE+C G
Sbjct: 81 LKILI-------HIGHHLNVVNLLGACTK---------------PGGPLMVIVEFCKFGN 118
Query: 206 LKSYLIKNRRRKLAFKV--------------VIQLALDLARGLSYLQSKKIVHRDVKTEN 251
L +YL R + +KV +I + +A+G+ +L S+K +HRD+ N
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 178
Query: 252 MLLDKTRTVKIADFGVARLEASNPHDMTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGI 309
+LL + VKI DFG+AR +P + L +MAPE + Y + DV+SFG+
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 310 CLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEM 368
LWEI+ PYP + E +++ R P + M CW P +RP
Sbjct: 239 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 298
Query: 369 DEVVAML 375
E+V L
Sbjct: 299 SELVEHL 305
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 133/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 4 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 53
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY G+L +L
Sbjct: 54 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVTEYMSKGSLLDFLKG 96
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 97 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 156
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 157 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 216
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW +P++RP + + A LE TS
Sbjct: 217 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 266
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 133/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 51
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY G+L +L
Sbjct: 52 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVTEYMSKGSLLDFLKG 94
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 95 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 154
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 155 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 214
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW +P++RP + + A LE TS
Sbjct: 215 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 264
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 133/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 62
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY G+L +L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVCEYMSKGSLLDFLKG 105
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW +P++RP + + A LE TS
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 132/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 311
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY G+L +L
Sbjct: 312 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVTEYMSKGSLLDFLKG 354
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 355 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 414
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 474
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW P++RP + + A LE TS
Sbjct: 475 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 96 IDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
IDP L G FG V G + GQ DVA+K++ +E SE E F +E
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDE-------FIEEA 50
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
V L H + + G + I + EY G L +YL +
Sbjct: 51 KVMMNLSHEKLVQLYGVCTKQRPIFI----------------ITEYMANGCLLNYL-REM 93
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
R + + ++++ D+ + YL+SK+ +HRD+ N L++ VK++DFG++R +
Sbjct: 94 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 153
Query: 275 PHDMT-GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 332
+ + G + + PEVL S ++ K D+++FG+ +WEIY MPY + SE T+
Sbjct: 154 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-TAE 212
Query: 333 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA-MLEAID 379
+ Q LR P + +M CW D+RP +++ +L+ +D
Sbjct: 213 HIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 260
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 127/307 (41%), Gaps = 46/307 (14%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-------VAVKLLDWGEESHRSEAEIAS 145
+WE +L + RG FG V G D VAVK+L G A ++
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
L+ H H NV +GA P V+VE+C G
Sbjct: 81 LKILI-------HIGHHLNVVNLLGACTK---------------PGGPLMVIVEFCKFGN 118
Query: 206 LKSYLIKNRRRKLAFKV--------------VIQLALDLARGLSYLQSKKIVHRDVKTEN 251
L +YL R + +KV +I + +A+G+ +L S+K +HRD+ N
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 178
Query: 252 MLLDKTRTVKIADFGVARLEASNPHDMTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGI 309
+LL + VKI DFG+AR +P + L +MAPE + Y + DV+SFG+
Sbjct: 179 ILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 310 CLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEM 368
LWEI+ PYP + E +++ R P + M CW P +RP
Sbjct: 239 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 298
Query: 369 DEVVAML 375
E+V L
Sbjct: 299 SELVEHL 305
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 133/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 62
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V+EY G L +L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVMEYMSKGCLLDFLKG 105
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW +P++RP + + A LE TS
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 132/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 228
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY G+L +L
Sbjct: 229 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVTEYMSKGSLLDFLKG 271
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 272 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW P++RP + + A LE TS
Sbjct: 392 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 132/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 228
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY G+L +L
Sbjct: 229 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVTEYMSKGSLLDFLKG 271
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 272 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW P++RP + + A LE TS
Sbjct: 392 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 132/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 62
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY G L +L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVTEYMSKGCLLDFLKG 105
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW +P++RP + + A LE TS
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 132/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 6 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 55
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY G+L +L
Sbjct: 56 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVTEYMSKGSLLDFLKG 98
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 99 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 158
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 159 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 218
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW P++RP + + A LE TS
Sbjct: 219 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 268
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 127/307 (41%), Gaps = 46/307 (14%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-------VAVKLLDWGEESHRSEAEIAS 145
+WE +L + RG FG V G D VAVK+L G A ++
Sbjct: 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 117
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
L+ H H NV +GA P V+VE+C G
Sbjct: 118 LKILI-------HIGHHLNVVNLLGACTK---------------PGGPLMVIVEFCKFGN 155
Query: 206 LKSYLIKNRRRKLAFKV--------------VIQLALDLARGLSYLQSKKIVHRDVKTEN 251
L +YL R + +KV +I + +A+G+ +L S+K +HRD+ N
Sbjct: 156 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 215
Query: 252 MLLDKTRTVKIADFGVARLEASNPHDMTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGI 309
+LL + VKI DFG+AR +P + L +MAPE + Y + DV+SFG+
Sbjct: 216 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 275
Query: 310 CLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEM 368
LWEI+ PYP + E +++ R P + M CW P +RP
Sbjct: 276 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 335
Query: 369 DEVVAML 375
E+V L
Sbjct: 336 SELVEHL 342
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 133/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 62
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V K+ H + + SE I +V EY G+L +L
Sbjct: 63 EAQVMKKIRHEKLVQLYAVV---SEEPIY--------------IVTEYMSKGSLLDFLKG 105
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW +P++RP + + A LE TS
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 133/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 10 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 59
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY + G+L +L
Sbjct: 60 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVTEYMNKGSLLDFLKG 102
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ ++ +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 103 ETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 162
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 163 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 222
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW P++RP + + A LE TS
Sbjct: 223 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 272
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 50/311 (16%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEIA 144
WE+ +L++ G FG V G D VAVK+L +S +E +++
Sbjct: 12 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 67
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L + + H N+ +GA T +G + V+VEY G
Sbjct: 68 DLISEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASKG 108
Query: 205 ALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTE 250
L+ YL R +L+ K ++ A +ARG+ YL SKK +HRD+
Sbjct: 109 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 168
Query: 251 NMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFG 308
N+L+ + +KIADFG+AR + G L +MAPE L Y + DV+SFG
Sbjct: 169 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 228
Query: 309 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 367
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 229 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 287
Query: 368 MDEVVAMLEAI 378
++V L+ I
Sbjct: 288 FKQLVEDLDRI 298
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 127/307 (41%), Gaps = 46/307 (14%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-------VAVKLLDWGEESHRSEAEIAS 145
+WE +L + RG FG V G D VAVK+L G A ++
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
L+ H H NV +GA P V+VE+C G
Sbjct: 81 LKILI-------HIGHHLNVVNLLGACTK---------------PGGPLMVIVEFCKFGN 118
Query: 206 LKSYLIKNRRRKLAFKV--------------VIQLALDLARGLSYLQSKKIVHRDVKTEN 251
L +YL R + +KV +I + +A+G+ +L S+K +HRD+ N
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 178
Query: 252 MLLDKTRTVKIADFGVARLEASNPHDMTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGI 309
+LL + VKI DFG+AR +P + L +MAPE + Y + DV+SFG+
Sbjct: 179 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 310 CLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEM 368
LWEI+ PYP + E +++ R P + M CW P +RP
Sbjct: 239 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 298
Query: 369 DEVVAML 375
E+V L
Sbjct: 299 SELVEHL 305
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 132/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 62
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY G+L +L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVTEYMSKGSLLDFLKG 105
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD+ N+L+ + K+ADFG+ARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIE 165
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW +P++RP + + A LE TS
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 136/296 (45%), Gaps = 39/296 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
EID + + I+ G FG V RG VA+K L G + R
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ--------RRE 63
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + +HPN+ + G + MP ++ E+ GAL S+
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTNS-------------MP---VMILTEFMENGALDSF 107
Query: 210 LIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR 269
L N + ++V L +A G+ YL VHRD+ N+L++ K++DFG++R
Sbjct: 108 LRLNDGQFTVIQLVGMLR-GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSR 166
Query: 270 LEASNPHDMTGETGTLG------YMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYP 322
N D T ET +LG + APE + + D +S+GI +WE+ + PY
Sbjct: 167 FLEENSSDPT-ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYW 225
Query: 323 DLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
D+S +V +A + Q+ R P CP+SL +M CW + + RP +VV+ L+ +
Sbjct: 226 DMSNQDVINA-IEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 142/316 (44%), Gaps = 54/316 (17%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEI 143
+WE KL + G FG V G D VAVK+L + +E ++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDL 84
Query: 144 ASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
+ L + + H N+ +GA T +G + V+VEY
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASK 125
Query: 204 GALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
G L+ YL R ++ FK ++ LARG+ YL S+K +HRD+
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT----LGYMAPEVLNGSAYNRKCDVY 305
N+L+ + +KIADFG+AR N D +T + +MAPE L Y + DV+
Sbjct: 186 RNVLVTENNVMKIADFGLAR--DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 306 SFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDK 364
SFG+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQ 302
Query: 365 RPEMDEVVAMLEAIDT 380
RP ++V L+ I T
Sbjct: 303 RPTFKQLVEDLDRILT 318
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 140/311 (45%), Gaps = 50/311 (16%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEIA 144
WE+ +L++ G FG V G D VAVK+L +S +E +++
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 78
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L + + H N+ +GA T +G + V+VEY G
Sbjct: 79 DLISEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASKG 119
Query: 205 ALKSYLIKNRRRKLAF--------------KVVIQLALDLARGLSYLQSKKIVHRDVKTE 250
L+ YL R L F K ++ A +ARG+ YL SKK +HRD+
Sbjct: 120 NLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 251 NMLLDKTRTVKIADFGVAR--LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFG 308
N+L+ + +KIADFG+AR T + +MAPE L Y + DV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 309 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 367
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 240 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 298
Query: 368 MDEVVAMLEAI 378
++V L+ I
Sbjct: 299 FKQLVEDLDRI 309
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 50/311 (16%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEIA 144
WE+ +L++ G FG V G D VAVK+L +S +E +++
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 78
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L + + H N+ +GA T +G + V+VEY G
Sbjct: 79 DLISEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASKG 119
Query: 205 ALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTE 250
L+ YL R +L+ K ++ A +ARG+ YL SKK +HRD+
Sbjct: 120 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 251 NMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFG 308
N+L+ + +KIADFG+AR + G L +MAPE L Y + DV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 309 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 367
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 240 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 298
Query: 368 MDEVVAMLEAI 378
++V L+ I
Sbjct: 299 FKQLVEDLDRI 309
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 132/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 180 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE----------AFLQ 229
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY G+L +L
Sbjct: 230 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVTEYMSKGSLLDFLKG 272
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ RL
Sbjct: 273 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIE 332
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 333 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 392
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW +P++RP + + A LE TS
Sbjct: 393 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 442
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 142/316 (44%), Gaps = 54/316 (17%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEI 143
+WE KL + G FG V G D VAVK+L + +E ++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDL 84
Query: 144 ASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
+ L + + H N+ +GA T +G + V+VEY
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASK 125
Query: 204 GALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
G L+ YL R ++ FK ++ LARG+ YL S+K +HRD+
Sbjct: 126 GNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT----LGYMAPEVLNGSAYNRKCDVY 305
N+L+ + +KIADFG+AR N D +T + +MAPE L Y + DV+
Sbjct: 186 RNVLVTENNVMKIADFGLAR--DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 306 SFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDK 364
SFG+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQ 302
Query: 365 RPEMDEVVAMLEAIDT 380
RP ++V L+ I T
Sbjct: 303 RPTFKQLVEDLDRILT 318
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 50/311 (16%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEIA 144
WE+ +L++ G FG V G D VAVK+L +S +E +++
Sbjct: 15 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 70
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L + + H N+ +GA T +G + V+VEY G
Sbjct: 71 DLISEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASKG 111
Query: 205 ALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTE 250
L+ YL R +L+ K ++ A +ARG+ YL SKK +HRD+
Sbjct: 112 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 171
Query: 251 NMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFG 308
N+L+ + +KIADFG+AR + G L +MAPE L Y + DV+SFG
Sbjct: 172 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 231
Query: 309 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 367
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 232 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 290
Query: 368 MDEVVAMLEAI 378
++V L+ I
Sbjct: 291 FKQLVEDLDRI 301
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 50/311 (16%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEIA 144
WE+ +L++ G FG V G D VAVK+L +S +E +++
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 78
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L + + H N+ +GA T +G + V+VEY G
Sbjct: 79 DLISEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASKG 119
Query: 205 ALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTE 250
L+ YL R +L+ K ++ A +ARG+ YL SKK +HRD+
Sbjct: 120 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 251 NMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFG 308
N+L+ + +KIADFG+AR + G L +MAPE L Y + DV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 309 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 367
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 240 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 298
Query: 368 MDEVVAMLEAI 378
++V L+ I
Sbjct: 299 FKQLVEDLDRI 309
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 50/311 (16%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEIA 144
WE+ +L++ G FG V G D VAVK+L +S +E +++
Sbjct: 8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 63
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L + + H N+ +GA T +G + V+VEY G
Sbjct: 64 DLISEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASKG 104
Query: 205 ALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTE 250
L+ YL R +L+ K ++ A +ARG+ YL SKK +HRD+
Sbjct: 105 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 164
Query: 251 NMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFG 308
N+L+ + +KIADFG+AR + G L +MAPE L Y + DV+SFG
Sbjct: 165 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 224
Query: 309 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 367
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 225 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 283
Query: 368 MDEVVAMLEAI 378
++V L+ I
Sbjct: 284 FKQLVEDLDRI 294
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 50/311 (16%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEIA 144
WE+ +L++ G FG V G D VAVK+L +S +E +++
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 78
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L + + H N+ +GA T +G + V+VEY G
Sbjct: 79 DLISEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASKG 119
Query: 205 ALKSYL--------------IKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTE 250
L+ YL N +L+ K ++ A +ARG+ YL SKK +HRD+
Sbjct: 120 NLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 251 NMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFG 308
N+L+ + +KIADFG+AR + G L +MAPE L Y + DV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 309 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 367
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 240 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 298
Query: 368 MDEVVAMLEAI 378
++V L+ I
Sbjct: 299 FKQLVEDLDRI 309
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 133/293 (45%), Gaps = 35/293 (11%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 3 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 52
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY G+L +L
Sbjct: 53 EAQVMKKLRHEKLVQLYAVV---SEEPIX--------------IVTEYMSKGSLLDFLKG 95
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 96 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 155
Query: 273 SNPHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSE 328
N + T G + + APE + K DV+SFGI L E+ +PYP + E
Sbjct: 156 DN--EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 213
Query: 329 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V V R R P CP SL ++M +CW P++RP + + A LE TS
Sbjct: 214 VLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 265
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 50/314 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEI 143
+WE KL + G FG V G D VAVK+L + +E ++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDL 84
Query: 144 ASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
+ L + + H N+ +GA T +G + V+VEY
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASK 125
Query: 204 GALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
G L+ YL R ++ FK ++ LARG+ YL S+K +HRD+
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSF 307
N+L+ + +KIADFG+AR + + G L +MAPE L Y + DV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 308 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 366
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 367 EMDEVVAMLEAIDT 380
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 128/306 (41%), Gaps = 45/306 (14%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-------VAVKLLDWGEESHRSEAEIAS 145
+WE +L + RG FG V G D VAVK+L G A +
Sbjct: 22 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-------ATHSE 74
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
RA ++ + H H NV +GA P V+VE+C G
Sbjct: 75 HRALMSELKILIHIGHHLNVVNLLGACTK---------------PGGPLMVIVEFCKFGN 119
Query: 206 LKSYLIKNRRRKLAFKV-------------VIQLALDLARGLSYLQSKKIVHRDVKTENM 252
L +YL R + +K +I + +A+G+ +L S+K +HRD+ N+
Sbjct: 120 LSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 179
Query: 253 LLDKTRTVKIADFGVARLEASNPHDMTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGIC 310
LL + VKI DFG+AR +P + L +MAPE + Y + DV+SFG+
Sbjct: 180 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 311 LWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 369
LWEI+ PYP + E +++ R P + M CW P +RP
Sbjct: 240 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 299
Query: 370 EVVAML 375
E+V L
Sbjct: 300 ELVEHL 305
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 126/307 (41%), Gaps = 46/307 (14%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-------VAVKLLDWGEESHRSEAEIAS 145
+WE +L + RG FG V G D VAVK+L G A ++
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
L+ H H NV +GA P V+ E+C G
Sbjct: 72 LKILI-------HIGHHLNVVNLLGACTK---------------PGGPLMVITEFCKFGN 109
Query: 206 LKSYLIKNRRRKLAFKV--------------VIQLALDLARGLSYLQSKKIVHRDVKTEN 251
L +YL R + +KV +I + +A+G+ +L S+K +HRD+ N
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 169
Query: 252 MLLDKTRTVKIADFGVARLEASNPHDMTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGI 309
+LL + VKI DFG+AR +P + L +MAPE + Y + DV+SFG+
Sbjct: 170 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 229
Query: 310 CLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEM 368
LWEI+ PYP + E +++ R P + M CW P +RP
Sbjct: 230 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 289
Query: 369 DEVVAML 375
E+V L
Sbjct: 290 SELVEHL 296
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 50/311 (16%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEIA 144
WE+ +L++ G FG V G D VAVK+L +S +E +++
Sbjct: 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 119
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L + + H N+ +GA T +G + V+VEY G
Sbjct: 120 DLISEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASKG 160
Query: 205 ALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTE 250
L+ YL R +L+ K ++ A +ARG+ YL SKK +HRD+
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 220
Query: 251 NMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFG 308
N+L+ + +KIADFG+AR + G L +MAPE L Y + DV+SFG
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 280
Query: 309 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 367
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 281 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 339
Query: 368 MDEVVAMLEAI 378
++V L+ I
Sbjct: 340 FKQLVEDLDRI 350
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 30/294 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI + + G FG V G Y+ VAVK L G S + AF +
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ----------AFLE 56
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E + L H + + + I + E+ G+L +L
Sbjct: 57 EANLMKTLQHDKLVRLYAVVTKEEPIYI----------------ITEFMAKGSLLDFLKS 100
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ K+ +I + +A G++Y++ K +HRD++ N+L+ ++ KIADFG+AR+
Sbjct: 101 DEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE 160
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVT 330
N + G + + APE +N + K +V+SFGI L+EI +PYP + ++V
Sbjct: 161 DNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVM 220
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGG 384
SA+ + P + CP L ++MK CW ++RP D + ++L+ T+ G
Sbjct: 221 SALSQGYRMPRMEN-CPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEG 273
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 50/311 (16%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEIA 144
WE+ +L++ G FG V G D VAVK+L +S +E +++
Sbjct: 16 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 71
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L + + H N+ +GA T +G + V+VEY G
Sbjct: 72 DLISEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASKG 112
Query: 205 ALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTE 250
L+ YL R +L+ K ++ A +ARG+ YL SKK +HRD+
Sbjct: 113 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 172
Query: 251 NMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFG 308
N+L+ + +KIADFG+AR + G L +MAPE L Y + DV+SFG
Sbjct: 173 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 232
Query: 309 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 367
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 233 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 291
Query: 368 MDEVVAMLEAI 378
++V L+ I
Sbjct: 292 FKQLVEDLDRI 302
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 50/314 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEI 143
+WE KL + G FG V G D VAVK+L + +E ++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEEDL 84
Query: 144 ASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
+ L + + H N+ +GA T +G + V+VEY
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASK 125
Query: 204 GALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
G L+ YL R ++ FK ++ LARG+ YL S+K +HRD+
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSF 307
N+L+ + +KIADFG+AR + + G L +MAPE L Y + DV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 308 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 366
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 367 EMDEVVAMLEAIDT 380
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 50/314 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEI 143
+WE KL + G FG V G D VAVK+L + +E ++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDL 84
Query: 144 ASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
+ L + + H N+ +GA T +G + V+VEY
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIITLLGAC---------TQDGPL-------YVIVEYASK 125
Query: 204 GALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
G L+ YL R ++ FK ++ LARG+ YL S+K +HRD+
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSF 307
N+L+ + +KIADFG+AR + + G L +MAPE L Y + DV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 308 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 366
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 367 EMDEVVAMLEAIDT 380
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 50/314 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEI 143
+WE KL + G FG V G D VAVK+L + +E ++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDL 84
Query: 144 ASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
+ L + + H N+ +GA T +G + V+VEY
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIIHLLGAC---------TQDGPL-------YVIVEYASK 125
Query: 204 GALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
G L+ YL R ++ FK ++ LARG+ YL S+K +HRD+
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSF 307
N+L+ + +KIADFG+AR + + G L +MAPE L Y + DV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 308 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 366
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 367 EMDEVVAMLEAIDT 380
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 132/291 (45%), Gaps = 31/291 (10%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 228
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY G+L +L
Sbjct: 229 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVGEYMSKGSLLDFLKG 271
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ +A +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 272 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 273 SNPHDM-TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 330
N + G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
Query: 331 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V R R P CP SL ++M +CW P++RP + + A LE TS
Sbjct: 392 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 134/293 (45%), Gaps = 35/293 (11%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L ++ +G FG V G ++G VA+K L G S AF Q
Sbjct: 10 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----------AFLQ 59
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E V KL H + + SE I +V EY + G+L +L
Sbjct: 60 EAQVMKKLRHEKLVQLYAVV---SEEPIY--------------IVTEYMNKGSLLDFLKG 102
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ L ++ ++ +A G++Y++ VHRD++ N+L+ + K+ADFG+ARL
Sbjct: 103 ETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 162
Query: 273 SNPHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSE 328
N + T G + + APE + K DV+SFGI L E+ +PYP + E
Sbjct: 163 DN--EWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 220
Query: 329 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V V R R P CP SL ++M +CW P++RP + + A LE TS
Sbjct: 221 VLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 272
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 50/314 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEI 143
+WE KL + G FG V G D VAVK+L + +E ++
Sbjct: 21 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDL 76
Query: 144 ASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
+ L + + H N+ +GA T +G + V+VEY
Sbjct: 77 SDLVSEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASK 117
Query: 204 GALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
G L+ YL R ++ FK ++ LARG+ YL S+K +HRD+
Sbjct: 118 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 177
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSF 307
N+L+ + +KIADFG+AR + + G L +MAPE L Y + DV+SF
Sbjct: 178 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 237
Query: 308 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 366
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 238 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 296
Query: 367 EMDEVVAMLEAIDT 380
++V L+ I T
Sbjct: 297 TFKQLVEDLDRILT 310
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 50/314 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEI 143
+WE KL + G FG V G D VAVK+L + +E ++
Sbjct: 16 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDL 71
Query: 144 ASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
+ L + + H N+ +GA T +G + V+VEY
Sbjct: 72 SDLVSEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASK 112
Query: 204 GALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
G L+ YL R ++ FK ++ LARG+ YL S+K +HRD+
Sbjct: 113 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTA 172
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSF 307
N+L+ + +KIADFG+AR + + G L +MAPE L Y + DV+SF
Sbjct: 173 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 232
Query: 308 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 366
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 233 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 291
Query: 367 EMDEVVAMLEAIDT 380
++V L+ I T
Sbjct: 292 TFKQLVEDLDRILT 305
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 126/303 (41%), Gaps = 42/303 (13%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-------VAVKLLDWGEESHRSEAEIAS 145
+WE +L + RG FG V G D VAVK+L G A ++
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 80
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
L+ H H NV +GA P V+VE+C G
Sbjct: 81 LKILI-------HIGHHLNVVNLLGACTK---------------PGGPLMVIVEFCKFGN 118
Query: 206 LKSYLIKNRRRKLAFK----------VVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
L +YL R + +K +I + +A+G+ +L S+K +HRD+ N+LL
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLS 178
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGICLWE 313
+ VKI DFG+AR +P + L +MAPE + Y + DV+SFG+ LWE
Sbjct: 179 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 238
Query: 314 IYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
I+ PYP + E +++ R P + M CW P +RP E+V
Sbjct: 239 IFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298
Query: 373 AML 375
L
Sbjct: 299 EHL 301
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 128/307 (41%), Gaps = 46/307 (14%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-------VAVKLLDWGEESHRSEAEIAS 145
+WE +L + RG FG V G D VAVK+L G A ++
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
L+ H H NV +GA P V+ E+C G
Sbjct: 72 LKILI-------HIGHHLNVVNLLGACTK---------------PGGPLMVITEFCKFGN 109
Query: 206 LKSYLIKNRRRKLAFKV--------------VIQLALDLARGLSYLQSKKIVHRDVKTEN 251
L +YL R + +KV +I + +A+G+ +L S+K +HRD+ N
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 169
Query: 252 MLLDKTRTVKIADFGVARLEASNP-HDMTGETGT-LGYMAPEVLNGSAYNRKCDVYSFGI 309
+LL + VKI DFG+AR +P + G+ L +MAPE + Y + DV+SFG+
Sbjct: 170 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 229
Query: 310 CLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEM 368
LWEI+ PYP + E +++ R P + M CW P +RP
Sbjct: 230 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 289
Query: 369 DEVVAML 375
E+V L
Sbjct: 290 SELVEHL 296
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 50/314 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEI 143
+WE KL + G FG V G D VAVK+L + +E ++
Sbjct: 18 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDL 73
Query: 144 ASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
+ L + + H N+ +GA T +G + V+VEY
Sbjct: 74 SDLVSEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASK 114
Query: 204 GALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
G L+ YL R ++ FK ++ LARG+ YL S+K +HRD+
Sbjct: 115 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 174
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSF 307
N+L+ + +KIADFG+AR + + G L +MAPE L Y + DV+SF
Sbjct: 175 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 234
Query: 308 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 366
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 235 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 293
Query: 367 EMDEVVAMLEAIDT 380
++V L+ I T
Sbjct: 294 TFKQLVEDLDRILT 307
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 133/293 (45%), Gaps = 35/293 (11%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-DVAVKLLDWGEESHRSEAEIASLRAAFTQ 152
WEI L + G FG V G ++G VA+K L G S S F +
Sbjct: 4 WEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES----------FLE 53
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E + KL H + + SE I +V EY + G+L +L
Sbjct: 54 EAQIMKKLKHDKLVQLYAVV---SEEPI--------------YIVTEYMNKGSLLDFLKD 96
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
R L ++ +A +A G++Y++ +HRD+++ N+L+ KIADFG+ARL
Sbjct: 97 GEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIE 156
Query: 273 SNPHDMTGETGT---LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSE 328
N + T G + + APE + K DV+SFGI L E+ +PYP ++ E
Sbjct: 157 DN--EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE 214
Query: 329 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
V V R R P+ CP SL +M CW +P++RP + + + LE T+
Sbjct: 215 VLEQVER-GYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTA 266
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 126/307 (41%), Gaps = 46/307 (14%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-------VAVKLLDWGEESHRSEAEIAS 145
+WE +L + RG FG V G D VAVK+L G A ++
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
L+ H H NV +GA P V+ E+C G
Sbjct: 72 LKILI-------HIGHHLNVVNLLGACTK---------------PGGPLMVITEFCKFGN 109
Query: 206 LKSYLIKNRRRKLAFKV--------------VIQLALDLARGLSYLQSKKIVHRDVKTEN 251
L +YL R + +KV +I + +A+G+ +L S+K +HRD+ N
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 169
Query: 252 MLLDKTRTVKIADFGVARLEASNPHDMTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGI 309
+LL + VKI DFG+AR +P + L +MAPE + Y + DV+SFG+
Sbjct: 170 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 229
Query: 310 CLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEM 368
LWEI+ PYP + E +++ R P + M CW P +RP
Sbjct: 230 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 289
Query: 369 DEVVAML 375
E+V L
Sbjct: 290 SELVEHL 296
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 141/314 (44%), Gaps = 50/314 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEI 143
+WE KL + G FG V G D VAVK+L + +E ++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDL 84
Query: 144 ASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
+ L + + H N+ +GA T +G + V+VEY
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASK 125
Query: 204 GALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
G L+ YL R ++ FK ++ LARG+ YL S+K +HRD+
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSF 307
N+L+ + ++IADFG+AR + + G L +MAPE L Y + DV+SF
Sbjct: 186 RNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 308 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 366
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 367 EMDEVVAMLEAIDT 380
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 50/314 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEI 143
+WE KL + G FG V G D VAVK+L + +E ++
Sbjct: 75 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDL 130
Query: 144 ASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
+ L + + H N+ +GA T +G + V+VEY
Sbjct: 131 SDLVSEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVEYASK 171
Query: 204 GALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
G L+ YL R ++ FK ++ LARG+ YL S+K +HRD+
Sbjct: 172 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 231
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSF 307
N+L+ + +KIADFG+AR + + G L +MAPE L Y + DV+SF
Sbjct: 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 291
Query: 308 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 366
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 292 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 350
Query: 367 EMDEVVAMLEAIDT 380
++V L+ I T
Sbjct: 351 TFKQLVEDLDRILT 364
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 128/307 (41%), Gaps = 46/307 (14%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-------VAVKLLDWGEESHRSEAEIAS 145
+WE +L + RG FG V G D VAVK+L G A +
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-------ATHSE 75
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
RA ++ + H H NV +GA P V+VE+C G
Sbjct: 76 HRALMSELKILIHIGHHLNVVNLLGACTK---------------PGGPLMVIVEFCKFGN 120
Query: 206 LKSYLIKNRRRKLAFKV--------------VIQLALDLARGLSYLQSKKIVHRDVKTEN 251
L +YL R + +K +I + +A+G+ +L S+K +HRD+ N
Sbjct: 121 LSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 180
Query: 252 MLLDKTRTVKIADFGVARLEASNPHDMTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGI 309
+LL + VKI DFG+AR +P + L +MAPE + Y + DV+SFG+
Sbjct: 181 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 240
Query: 310 CLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEM 368
LWEI+ PYP + E +++ R P + M CW P +RP
Sbjct: 241 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 300
Query: 369 DEVVAML 375
E+V L
Sbjct: 301 SELVEHL 307
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 140/314 (44%), Gaps = 50/314 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEI 143
+WE KL + G FG V G D VAVK+L + +E ++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDL 84
Query: 144 ASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
+ L + + H N+ +GA T +G + V+V Y
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVAYASK 125
Query: 204 GALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
G L+ YL R ++ FK ++ LARG+ YL S+K +HRD+
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSF 307
N+L+ + +KIADFG+AR + + G L +MAPE L Y + DV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 308 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 366
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 367 EMDEVVAMLEAIDT 380
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 137/302 (45%), Gaps = 47/302 (15%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRG----IYDGQD---VAVKLLDWGEESHRSEAEIASLR 147
E+ K+ + +G+FG V+ G I G+ VAVK ++ E ASLR
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN----------ESASLR 61
Query: 148 --AAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
F E +V +V + +G G P+ VV+E G
Sbjct: 62 ERIEFLNEASVMKGFTCHHVVRLLGVV-------------SKGQPT---LVVMELMAHGD 105
Query: 206 LKSYLIKNR--------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKT 257
LKSYL R R + +IQ+A ++A G++YL +KK VHRD+ N ++
Sbjct: 106 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD 165
Query: 258 RTVKIADFGVARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
TVKI DFG+ R + G G L +MAPE L + D++SFG+ LWEI
Sbjct: 166 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 225
Query: 316 -CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAM 374
+ PY LS +V V+ + P CP + ++M+ CW NP RP E+V +
Sbjct: 226 SLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNL 284
Query: 375 LE 376
L+
Sbjct: 285 LK 286
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 135/296 (45%), Gaps = 39/296 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
EID + + I+ G FG V RG VA+K L G + R
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ--------RRE 61
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + +HPN+ + G + MP ++ E+ GAL S+
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVTNS-------------MP---VMILTEFMENGALDSF 105
Query: 210 LIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR 269
L N + ++V L +A G+ YL VHRD+ N+L++ K++DFG++R
Sbjct: 106 LRLNDGQFTVIQLVGMLR-GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSR 164
Query: 270 LEASNPHDMTGETGTLG------YMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYP 322
N D T T +LG + APE + + D +S+GI +WE+ + PY
Sbjct: 165 FLEENSSDPT-YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYW 223
Query: 323 DLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
D+S +V +A + Q+ R P CP+SL +M CW + + RP +VV+ L+ +
Sbjct: 224 DMSNQDVINA-IEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 140/314 (44%), Gaps = 50/314 (15%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD---------VAVKLLDWGEESHRSEAEI 143
+WE KL + G FG V G D VAVK+L + +E ++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDL 84
Query: 144 ASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
+ L + + H N+ +GA T +G + V+V Y
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIINLLGAC---------TQDGPL-------YVIVGYASK 125
Query: 204 GALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
G L+ YL R ++ FK ++ LARG+ YL S+K +HRD+
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSF 307
N+L+ + +KIADFG+AR + + G L +MAPE L Y + DV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 308 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 366
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 367 EMDEVVAMLEAIDT 380
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 35/276 (12%)
Query: 110 GTFGTVHRGIYDGQ----DVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FG+V +G+Y + DVA+K+L G E +E +E + H+LD+P +
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEE--------MMREAQIMHQLDNPYI 72
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ IG + + +V+E GG L +L+ +R ++ V +
Sbjct: 73 VRLIGVCQAEALM-----------------LVMEMAGGGPLHKFLV-GKREEIPVSNVAE 114
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG-- 283
L ++ G+ YL+ K VHRD+ N+LL KI+DFG+++ ++ T +
Sbjct: 115 LLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 174
Query: 284 -TLGYMAPEVLNGSAYNRKCDVYSFGICLWE-IYCCDMPYPDLSFSEVTSAVVRQNLRPE 341
L + APE +N ++ + DV+S+G+ +WE + PY + EV A + Q R E
Sbjct: 175 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-AFIEQGKRME 233
Query: 342 IPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEA 377
P CP L +M CW + RP+ V + A
Sbjct: 234 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 269
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 35/276 (12%)
Query: 110 GTFGTVHRGIYDGQ----DVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FG+V +G+Y + DVA+K+L G E +E +E + H+LD+P +
Sbjct: 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEE--------MMREAQIMHQLDNPYI 398
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ IG + + +V+E GG L +L+ +R ++ V +
Sbjct: 399 VRLIGVCQAEALM-----------------LVMEMAGGGPLHKFLV-GKREEIPVSNVAE 440
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG-- 283
L ++ G+ YL+ K VHR++ N+LL KI+DFG+++ ++ T +
Sbjct: 441 LLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 500
Query: 284 -TLGYMAPEVLNGSAYNRKCDVYSFGICLWE-IYCCDMPYPDLSFSEVTSAVVRQNLRPE 341
L + APE +N ++ + DV+S+G+ +WE + PY + EV A + Q R E
Sbjct: 501 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-AFIEQGKRME 559
Query: 342 IPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEA 377
P CP L +M CW + RP+ V + A
Sbjct: 560 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 595
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 129/293 (44%), Gaps = 44/293 (15%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
+I+G G FG V+ G G VAVK L E + + E+ F E
Sbjct: 49 LIRG-LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVYSEQDELD-----FLMEA 99
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
+ K +H N+ + IG ++ + +P +++E GG LKS+L + R
Sbjct: 100 LIISKFNHQNIVRCIGVSLQS-------------LPR---FILLELMAGGDLKSFLRETR 143
Query: 215 RR-----KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFG 266
R LA ++ +A D+A G YL+ +HRD+ N LL R KI DFG
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 267 VARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPD 323
+AR + G L +M PE + K D +SFG+ LWEI+ MPYP
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 263
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
S EV V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 264 KSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 134/295 (45%), Gaps = 31/295 (10%)
Query: 96 IDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAAF 150
ID LI+ G FG+V G +D VAVK + S R E F
Sbjct: 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEE-------F 83
Query: 151 TQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL 210
E A HPNV + +G + E++ Q G+P V++ + G L +YL
Sbjct: 84 LSEAACMKDFSHPNVIRLLGVCI---EMSSQ------GIPKPM--VILPFMKYGDLHTYL 132
Query: 211 IKNRR----RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+ +R + + + +++ +D+A G+ YL ++ +HRD+ N +L TV +ADFG
Sbjct: 133 LYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFG 192
Query: 267 VARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPD 323
+++ S + G + ++A E L Y K DV++FG+ +WEI M PYP
Sbjct: 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ E+ ++ + R + P C L +M CW +P RP + LE +
Sbjct: 253 VQNHEMYDYLLHGH-RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 34/285 (11%)
Query: 101 LIIKGAFARGTFGTVHRGIYDGQ-----DVAVKLLDWGEESHRSEAEIASLRAAFTQEVA 155
+++ G FG V+ G+Y +VAVK + + + + + + F E
Sbjct: 26 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVK-------TCKKDCTLDN-KEKFMSEAV 77
Query: 156 VWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR 215
+ LDHP++ K IG I+ + I ++E G L YL +N+
Sbjct: 78 IMKNLDHPHIVKLIGI--------IEEEPTWI---------IMELYPYGELGHYLERNKN 120
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASN 274
L ++ +L + + ++YL+S VHRD+ N+L+ VK+ DFG++R +E +
Sbjct: 121 -SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 179
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAV 333
+ + + +M+PE +N + DV+ F +C+WEI P+ L +V +
Sbjct: 180 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL 239
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ + P+ P CP L +M RCWD +P RP E+V L +
Sbjct: 240 EKGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 34/285 (11%)
Query: 101 LIIKGAFARGTFGTVHRGIYDGQ-----DVAVKLLDWGEESHRSEAEIASLRAAFTQEVA 155
+++ G FG V+ G+Y +VAVK + + + + + + F E
Sbjct: 14 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVK-------TCKKDCTLDN-KEKFMSEAV 65
Query: 156 VWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR 215
+ LDHP++ K IG I+ + I ++E G L YL +N+
Sbjct: 66 IMKNLDHPHIVKLIGI--------IEEEPTWI---------IMELYPYGELGHYLERNKN 108
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASN 274
L ++ +L + + ++YL+S VHRD+ N+L+ VK+ DFG++R +E +
Sbjct: 109 -SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAV 333
+ + + +M+PE +N + DV+ F +C+WEI P+ L +V +
Sbjct: 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL 227
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ + P+ P CP L +M RCWD +P RP E+V L +
Sbjct: 228 EKGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 129/293 (44%), Gaps = 44/293 (15%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
+I+G G FG V+ G G VAVK L E + E+ F E
Sbjct: 49 LIRG-LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEA 99
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
+ KL+H N+ + IG ++ + +P +++E GG LKS+L + R
Sbjct: 100 LIISKLNHQNIVRCIGVSLQS-------------LPR---FILLELMAGGDLKSFLRETR 143
Query: 215 RR-----KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFG 266
R LA ++ +A D+A G YL+ +HRD+ N LL R KI DFG
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 267 VARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPD 323
+AR + G L +M PE + K D +SFG+ LWEI+ MPYP
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 263
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
S EV V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 264 KSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 129/293 (44%), Gaps = 44/293 (15%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
+I+G G FG V+ G G VAVK L E + E+ F E
Sbjct: 35 LIRG-LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEA 85
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
+ KL+H N+ + IG ++ + +P +++E GG LKS+L + R
Sbjct: 86 LIISKLNHQNIVRCIGVSLQS-------------LPR---FILLELMAGGDLKSFLRETR 129
Query: 215 RR-----KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFG 266
R LA ++ +A D+A G YL+ +HRD+ N LL R KI DFG
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 189
Query: 267 VARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPD 323
+AR + G L +M PE + K D +SFG+ LWEI+ MPYP
Sbjct: 190 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 249
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
S EV V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 250 KSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 107 FARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLD 161
+G FG+V +D VAVK+L +++ +S F +E A + D
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKML-------KADIIASSDIEEFLREAACMKEFD 83
Query: 162 HPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRK---- 217
HP+V K +G ++ + G + +P V++ + G L ++L+ +R +
Sbjct: 84 HPHVAKLVGVSLRSRA------KGRLPIP----MVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 218 LAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD 277
L + +++ +D+A G+ YL S+ +HRD+ N +L + TV +ADFG++R S +
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY 193
Query: 278 MTGETGTL--GYMAPEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVTSAVV 334
G L ++A E L + Y DV++FG+ +WEI PY + +E+ + ++
Sbjct: 194 RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI 253
Query: 335 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRP-------EMDEVVAMLEAIDTSK 382
N R + P C + ++M +CW A+P +RP E++ ++ L + TS+
Sbjct: 254 GGN-RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQ 307
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 34/285 (11%)
Query: 101 LIIKGAFARGTFGTVHRGIYDGQ-----DVAVKLLDWGEESHRSEAEIASLRAAFTQEVA 155
+++ G FG V+ G+Y +VAVK + + + + + + F E
Sbjct: 10 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVK-------TCKKDCTLDN-KEKFMSEAV 61
Query: 156 VWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR 215
+ LDHP++ K IG I+ + I ++E G L YL +N+
Sbjct: 62 IMKNLDHPHIVKLIGI--------IEEEPTWI---------IMELYPYGELGHYLERNKN 104
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASN 274
L ++ +L + + ++YL+S VHRD+ N+L+ VK+ DFG++R +E +
Sbjct: 105 -SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 163
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAV 333
+ + + +M+PE +N + DV+ F +C+WEI P+ L +V +
Sbjct: 164 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL 223
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ + P+ P CP L +M RCWD +P RP E+V L +
Sbjct: 224 EKGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 137/307 (44%), Gaps = 51/307 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 72
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL K++ R
Sbjct: 73 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQKHKERIDHI 118
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 119 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 177
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 178 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 236
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+++ N R P CP + +M CW+ N ++RP ++ ++ I +
Sbjct: 237 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 296
Query: 382 KGGGMIP 388
G++P
Sbjct: 297 M-AGLVP 302
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 50/303 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 71
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL K++ R
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQKHKERIDHI 117
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 118 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 177 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 235
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+++ N R P CP + +M CW+ N ++RP ++ ++ I +
Sbjct: 236 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 295
Query: 382 KGG 384
G
Sbjct: 296 MAG 298
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 50/303 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 75
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL K++ R
Sbjct: 76 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQKHKERIDHI 121
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 122 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 180
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 181 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 239
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+++ N R P CP + +M CW+ N ++RP ++ ++ I +
Sbjct: 240 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 299
Query: 382 KGG 384
G
Sbjct: 300 MAG 302
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 50/303 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 74
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL K++ R
Sbjct: 75 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQKHKERIDHI 120
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 121 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 179
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 180 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 238
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+++ N R P CP + +M CW+ N ++RP ++ ++ I +
Sbjct: 239 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 298
Query: 382 KGG 384
G
Sbjct: 299 MAG 301
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 50/303 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 73
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL K++ R
Sbjct: 74 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQKHKERIDHI 119
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 120 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 178
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 179 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 237
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+++ N R P CP + +M CW+ N ++RP ++ ++ I +
Sbjct: 238 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 297
Query: 382 KGG 384
G
Sbjct: 298 MAG 300
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 50/303 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 86
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL K++ R
Sbjct: 87 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 133 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 191
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 192 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 250
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+++ N R P CP + +M CW+ N ++RP ++ ++ I +
Sbjct: 251 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 310
Query: 382 KGG 384
G
Sbjct: 311 MAG 313
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 50/303 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 68
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL K++ R
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQKHKERIDHI 114
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 115 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 174 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 232
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+++ N R P CP + +M CW+ N ++RP ++ ++ I +
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292
Query: 382 KGG 384
G
Sbjct: 293 MAG 295
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 50/303 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 68
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL K++ R
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQKHKERIDHI 114
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 115 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 174 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 232
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+++ N R P CP + +M CW+ N ++RP ++ ++ I +
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292
Query: 382 KGG 384
G
Sbjct: 293 MAG 295
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
E+D + I G FG V G VA+K L G + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--------RRD 92
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G + + I V EY G+L S+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMI----------------VTEYMENGSLDSF 136
Query: 210 LIKNRRRKLAFKVV--IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
L R+ F V+ + + +A G+ YL VHRD+ N+L++ K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 268 ARLEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPD 323
AR+ +P + G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 ARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
+S +V A V + R P CP++L +M CW + + RP+ +++V++L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 50/303 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 68
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL K++ R
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQKHKERIDHI 114
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 115 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKV 173
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 174 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 232
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+++ N R P CP + +M CW+ N ++RP ++ ++ I +
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292
Query: 382 KGG 384
G
Sbjct: 293 MAG 295
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 50/303 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 66
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL K++ R
Sbjct: 67 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQKHKERIDHI 112
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 113 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 171
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 172 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 230
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+++ N R P CP + +M CW+ N ++RP ++ ++ I
Sbjct: 231 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 290
Query: 382 KGG 384
G
Sbjct: 291 MAG 293
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 131/303 (43%), Gaps = 41/303 (13%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIA 144
++WE L G FG V G VAVK+L + EA ++
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L+ + H H N+ +GA T G + V+ EYC G
Sbjct: 99 ELKI-------MSHLGQHENIVNLLGAC---------THGGPV-------LVITEYCCYG 135
Query: 205 ALKSYLIKNRR--------RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
L ++L + R L + ++ + +A+G+++L SK +HRDV N+LL
Sbjct: 136 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 195
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFGICLWEI 314
KI DFG+AR ++ + + L +MAPE + Y + DV+S+GI LWEI
Sbjct: 196 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
Query: 315 YCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ + PYP + + +V+ + P P ++ ++M+ CW P RP ++ +
Sbjct: 256 FSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 315
Query: 374 MLE 376
L+
Sbjct: 316 FLQ 318
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 50/303 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 99
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL K++ R
Sbjct: 100 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQKHKERIDHI 145
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 146 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 204
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 205 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 263
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+++ N R P CP + +M CW+ N ++RP ++ ++ I
Sbjct: 264 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323
Query: 382 KGG 384
G
Sbjct: 324 MAG 326
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 131/303 (43%), Gaps = 41/303 (13%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIA 144
++WE L G FG V G VAVK+L + EA ++
Sbjct: 31 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 90
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L+ + H H N+ +GA T G + V+ EYC G
Sbjct: 91 ELKI-------MSHLGQHENIVNLLGAC---------THGGPV-------LVITEYCCYG 127
Query: 205 ALKSYLIKNRR--------RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
L ++L + R L + ++ + +A+G+++L SK +HRDV N+LL
Sbjct: 128 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 187
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFGICLWEI 314
KI DFG+AR ++ + + L +MAPE + Y + DV+S+GI LWEI
Sbjct: 188 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
Query: 315 YCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ + PYP + + +V+ + P P ++ ++M+ CW P RP ++ +
Sbjct: 248 FSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 307
Query: 374 MLE 376
L+
Sbjct: 308 FLQ 310
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 44/293 (15%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
+I+G G FG V+ G G VAVK L E + E+ F E
Sbjct: 61 LIRG-LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP---EVCSEQDELD-----FLMEA 111
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
+ K +H N+ + IG ++ + +P +++E GG LKS+L + R
Sbjct: 112 LIISKFNHQNIVRCIGVSLQS-------------LPR---FILLELMAGGDLKSFLRETR 155
Query: 215 RR-----KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFG 266
R LA ++ +A D+A G YL+ +HRD+ N LL R KI DFG
Sbjct: 156 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 215
Query: 267 VARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPD 323
+AR + G L +M PE + K D +SFG+ LWEI+ MPYP
Sbjct: 216 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 275
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
S EV V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 276 KSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 40/296 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD------VAVKLLDWGEESHRSEAEIASLRA 148
EI P+ + + G FG V++G+ VA+K L G + R
Sbjct: 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQ--------RV 91
Query: 149 AFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKS 208
F E + + H N+ + G + I + EY GAL
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI----------------ITEYMENGALDK 135
Query: 209 YLIKNRRRKLAFKVV--IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+L R + F V+ + + +A G+ YL + VHRD+ N+L++ K++DFG
Sbjct: 136 FL---REKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFG 192
Query: 267 VARLEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYP 322
++R+ +P + +G + + APE ++ + DV+SFGI +WE+ + PY
Sbjct: 193 LSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYW 252
Query: 323 DLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+LS EV A + R P CPS++ +M +CW +RP+ ++V++L+ +
Sbjct: 253 ELSNHEVMKA-INDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 44/293 (15%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
+I+G G FG V+ G G VAVK L E + E+ F E
Sbjct: 34 LIRG-LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEA 84
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
+ K +H N+ + IG ++ + +P +++E GG LKS+L + R
Sbjct: 85 LIISKFNHQNIVRCIGVSLQS-------------LPR---FILLELMAGGDLKSFLRETR 128
Query: 215 RR-----KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFG 266
R LA ++ +A D+A G YL+ +HRD+ N LL R KI DFG
Sbjct: 129 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 267 VARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPD 323
+AR + G L +M PE + K D +SFG+ LWEI+ MPYP
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
S EV V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 249 KSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
E+D + I G FG V G VA+K L G + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--------RRD 92
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G + + I V EY G+L S+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMI----------------VTEYMENGSLDSF 136
Query: 210 LIKNRRRKLAFKVV--IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
L R+ F V+ + + +A G+ YL VHRD+ N+L++ K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGL 193
Query: 268 ARLEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPD 323
+R+ +P + G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
+S +V A V + R P CP++L +M CW + + RP+ +++V++L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 44/293 (15%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
+I+G G FG V+ G G VAVK L E + E+ F E
Sbjct: 35 LIRG-LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEA 85
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
+ K +H N+ + IG ++ + +P +++E GG LKS+L + R
Sbjct: 86 LIISKFNHQNIVRCIGVSLQS-------------LPR---FILLELMAGGDLKSFLRETR 129
Query: 215 RR-----KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFG 266
R LA ++ +A D+A G YL+ +HRD+ N LL R KI DFG
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 189
Query: 267 VARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPD 323
+AR + G L +M PE + K D +SFG+ LWEI+ MPYP
Sbjct: 190 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 249
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
S EV V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 250 KSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 44/293 (15%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
+I+G G FG V+ G G VAVK L E + E+ F E
Sbjct: 51 LIRG-LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEA 101
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
+ K +H N+ + IG ++ + +P +++E GG LKS+L + R
Sbjct: 102 LIISKFNHQNIVRCIGVSLQS-------------LPR---FILLELMAGGDLKSFLRETR 145
Query: 215 RR-----KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFG 266
R LA ++ +A D+A G YL+ +HRD+ N LL R KI DFG
Sbjct: 146 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 205
Query: 267 VARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPD 323
+AR + G L +M PE + K D +SFG+ LWEI+ MPYP
Sbjct: 206 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 265
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
S EV V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 266 KSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 44/293 (15%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
+I+G G FG V+ G G VAVK L E + E+ F E
Sbjct: 41 LIRG-LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEA 91
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
+ K +H N+ + IG ++ + +P +++E GG LKS+L + R
Sbjct: 92 LIISKFNHQNIVRCIGVSLQS-------------LPR---FILLELMAGGDLKSFLRETR 135
Query: 215 RR-----KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFG 266
R LA ++ +A D+A G YL+ +HRD+ N LL R KI DFG
Sbjct: 136 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 195
Query: 267 VARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPD 323
+AR + G L +M PE + K D +SFG+ LWEI+ MPYP
Sbjct: 196 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 255
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
S EV V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 256 KSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 44/293 (15%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
+I+G G FG V+ G G VAVK L E + E+ F E
Sbjct: 34 LIRG-LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEA 84
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
+ K +H N+ + IG ++ + +P +++E GG LKS+L + R
Sbjct: 85 LIISKFNHQNIVRCIGVSLQS-------------LPR---FILMELMAGGDLKSFLRETR 128
Query: 215 RR-----KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFG 266
R LA ++ +A D+A G YL+ +HRD+ N LL R KI DFG
Sbjct: 129 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 267 VARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPD 323
+AR + G L +M PE + K D +SFG+ LWEI+ MPYP
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
S EV V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 249 KSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 44/293 (15%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
+I+G G FG V+ G G VAVK L E + E+ F E
Sbjct: 49 LIRG-LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEA 99
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
+ K +H N+ + IG ++ + +P +++E GG LKS+L + R
Sbjct: 100 LIISKFNHQNIVRCIGVSLQS-------------LPR---FILMELMAGGDLKSFLRETR 143
Query: 215 RR-----KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFG 266
R LA ++ +A D+A G YL+ +HRD+ N LL R KI DFG
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 267 VARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPD 323
+AR + G L +M PE + K D +SFG+ LWEI+ MPYP
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 263
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
S EV V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 264 KSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 136/300 (45%), Gaps = 47/300 (15%)
Query: 95 EIDPAKLIIKGAFARGTFGTV---------HRGIYDGQDVAVKLLDWGEESHRSEAEIAS 145
EID + + I+ G FG V R I+ VA+K L G +
Sbjct: 29 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIF----VAIKTLKSGYTEKQ------- 77
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
R F E ++ + DHPNV G ++ + ++ E+ G+
Sbjct: 78 -RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV----------------MIITEFMENGS 120
Query: 206 LKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADF 265
L S+L +N + ++V L +A G+ YL VHRD+ N+L++ K++DF
Sbjct: 121 LDSFLRQNDGQFTVIQLVGMLR-GIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDF 179
Query: 266 GVARLEASNPHDMTGETGTLG------YMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-D 318
G++R + D T T LG + APE + + DV+S+GI +WE+ +
Sbjct: 180 GLSRFLEDDTSDPT-YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 238
Query: 319 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
PY D++ +V +A + Q+ R P CPS+L +M CW + + RP+ ++V L+ +
Sbjct: 239 RPYWDMTNQDVINA-IEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 44/293 (15%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
+I+G G FG V+ G G VAVK L E + E+ F E
Sbjct: 52 LIRG-LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEA 102
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
+ K +H N+ + IG ++ + +P +++E GG LKS+L + R
Sbjct: 103 LIISKFNHQNIVRCIGVSLQS-------------LPR---FILLELMAGGDLKSFLRETR 146
Query: 215 RR-----KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFG 266
R LA ++ +A D+A G YL+ +HRD+ N LL R KI DFG
Sbjct: 147 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 206
Query: 267 VARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPD 323
+AR + G L +M PE + K D +SFG+ LWEI+ MPYP
Sbjct: 207 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 266
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
S EV V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 267 KSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 44/293 (15%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
+I+G G FG V+ G G VAVK L E + E+ F E
Sbjct: 75 LIRG-LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP---EVCSEQDELD-----FLMEA 125
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
+ K +H N+ + IG ++ + +P +++E GG LKS+L + R
Sbjct: 126 LIISKFNHQNIVRCIGVSLQS-------------LPR---FILLELMAGGDLKSFLRETR 169
Query: 215 RR-----KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFG 266
R LA ++ +A D+A G YL+ +HRD+ N LL R KI DFG
Sbjct: 170 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 229
Query: 267 VARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPD 323
+AR + G L +M PE + K D +SFG+ LWEI+ MPYP
Sbjct: 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 289
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
S EV V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 290 KSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 134/293 (45%), Gaps = 35/293 (11%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYD--GQ---DVAVKLLDWGEESHRSEAEIASLRAA 149
EI+ + + I+ G FG V G G+ VA+K L G + R
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQ--------RRD 69
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ G + + I V EY G+L ++
Sbjct: 70 FLGEASIMGQFDHPNIIHLEGVVTKSKPVMI----------------VTEYMENGSLDTF 113
Query: 210 LIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR 269
L KN + ++V L ++ G+ YL VHRD+ N+L++ K++DFG++R
Sbjct: 114 LKKNDGQFTVIQLVGMLR-GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 172
Query: 270 LEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLS 325
+ +P + G + + APE + + DV+S+GI +WE+ + PY +++
Sbjct: 173 VLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMT 232
Query: 326 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+V A V + R P CP++L +M CW + RP+ DE+V ML+ +
Sbjct: 233 NQDVIKA-VEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
E+D + I G FG V G VA+K L G + R
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--------RRD 90
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G + + I V EY G+L S+
Sbjct: 91 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMI----------------VTEYMENGSLDSF 134
Query: 210 LIKNRRRKLAFKVV--IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
L R+ F V+ + + +A G+ YL VHRD+ N+L++ K++DFG+
Sbjct: 135 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 191
Query: 268 ARLEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPD 323
+R+ +P + G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 192 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 251
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
+S +V A V + R P CP++L +M CW + + RP+ +++V++L+ + + G
Sbjct: 252 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 310
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 44/293 (15%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
+I+G G FG V+ G G VAVK L E + E+ F E
Sbjct: 26 LIRG-LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEA 76
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
+ K +H N+ + IG ++ + +P +++E GG LKS+L + R
Sbjct: 77 LIISKFNHQNIVRCIGVSLQS-------------LPR---FILLELMAGGDLKSFLRETR 120
Query: 215 RR-----KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFG 266
R LA ++ +A D+A G YL+ +HRD+ N LL R KI DFG
Sbjct: 121 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 180
Query: 267 VARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPD 323
+AR + G L +M PE + K D +SFG+ LWEI+ MPYP
Sbjct: 181 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 240
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
S EV V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 241 KSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 132/297 (44%), Gaps = 50/297 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 86
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL K++ R
Sbjct: 87 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 133 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 191
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 192 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 250
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+++ N R P CP + +M CW+ N ++RP ++ ++ I
Sbjct: 251 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
E+D + I G FG V G VA+K L G + R
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--------RRD 63
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G + + I V EY G+L S+
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMI----------------VTEYMENGSLDSF 107
Query: 210 LIKNRRRKLAFKVV--IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
L R+ F V+ + + +A G+ YL VHRD+ N+L++ K++DFG+
Sbjct: 108 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 164
Query: 268 ARLEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPD 323
+R+ +P + G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 165 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 224
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
+S +V A V + R P CP++L +M CW + + RP+ +++V++L+ + + G
Sbjct: 225 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 283
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
E+D + I G FG V G VA+K L G + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--------RRD 92
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G + + I V EY G+L S+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMI----------------VTEYMENGSLDSF 136
Query: 210 LIKNRRRKLAFKVV--IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
L R+ F V+ + + +A G+ YL VHRD+ N+L++ K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 268 ARLEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPD 323
+R+ +P + G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
+S +V A V + R P CP++L +M CW + + RP+ +++V++L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 132/297 (44%), Gaps = 50/297 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 67
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL K++ R
Sbjct: 68 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQKHKERIDHI 113
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 114 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 172
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 173 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 231
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+++ N R P CP + +M CW+ N ++RP ++ ++ I
Sbjct: 232 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 288
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
E+D + I G FG V G VA+K L G + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--------RRD 92
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G + + I V EY G+L S+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMI----------------VTEYMENGSLDSF 136
Query: 210 LIKNRRRKLAFKVV--IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
L R+ F V+ + + +A G+ YL VHRD+ N+L++ K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 268 ARLEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPD 323
+R+ +P + G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
+S +V A V + R P CP++L +M CW + + RP+ +++V++L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
E+D + I G FG V G VA+K L G + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--------RRD 92
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G + + I V EY G+L S+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMI----------------VTEYMENGSLDSF 136
Query: 210 LIKNRRRKLAFKVV--IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
L R+ F V+ + + +A G+ YL VHRD+ N+L++ K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 268 ARLEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPD 323
+R+ +P + G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
+S +V A V + R P CP++L +M CW + + RP+ +++V++L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
E+D + I G FG V G VA+K L G + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--------RRD 92
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G + + I V EY G+L S+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMI----------------VTEYMENGSLDSF 136
Query: 210 LIKNRRRKLAFKVV--IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
L R+ F V+ + + +A G+ YL VHRD+ N+L++ K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 268 ARLEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPD 323
+R+ +P + G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
+S +V A V + R P CP++L +M CW + + RP+ +++V++L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
E+D + I G FG V G VA+K L G + R
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--------RRD 80
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G + + I V EY G+L S+
Sbjct: 81 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMI----------------VTEYMENGSLDSF 124
Query: 210 LIKNRRRKLAFKVV--IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
L R+ F V+ + + +A G+ YL VHRD+ N+L++ K++DFG+
Sbjct: 125 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 181
Query: 268 ARLEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPD 323
+R+ +P + G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 182 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 241
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
+S +V A V + R P CP++L +M CW + + RP+ +++V++L+ + + G
Sbjct: 242 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 300
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 136/293 (46%), Gaps = 35/293 (11%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIY--DGQ---DVAVKLLDWGEESHRSEAEIASLRAA 149
EI+ +++ I+ G G V G GQ VA+K L G + R
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ--------RRD 96
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G G + M +V EY G+L ++
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVT----------RGRLAM------IVTEYMENGSLDTF 140
Query: 210 LIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR 269
L + + ++ + + G+ YL VHRD+ N+L+D K++DFG++R
Sbjct: 141 L-RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
Query: 270 LEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLS 325
+ +P + TG + + APE + ++ DV+SFG+ +WE+ + PY +++
Sbjct: 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT 259
Query: 326 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+V S+ V + R P CP +L +M CW + +RP ++V++L+A+
Sbjct: 260 NRDVISS-VEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 134/303 (44%), Gaps = 50/303 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 71
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++E+ G+L+ YL K++ R
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLK--------------LIMEFLPYGSLREYLQKHKERIDHI 117
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 118 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 177 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 235
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+++ N R P CP + +M CW+ N ++RP ++ ++ I +
Sbjct: 236 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 295
Query: 382 KGG 384
G
Sbjct: 296 MAG 298
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 134/300 (44%), Gaps = 39/300 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
E+D + I G FG V G VA+K L G + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--------RRD 92
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G + + I V EY G+L S+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMI----------------VTEYMENGSLDSF 136
Query: 210 LIKNRRRKLAFKVV--IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
L R+ F V+ + + +A G+ YL VHRD+ N+L++ K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 268 ARLEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPD 323
R+ +P + G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 GRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
+S +V A V + R P CP++L +M CW + + RP+ +++V++L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 57/318 (17%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTV-------HRGIYDGQDVAVKLLDWGEESHRSEAEIAS 145
+WE L++ G FG V +G VAVK+L + + S +E+
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML----KENASPSELRD 72
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
L + F V +++HP+V K GA L ++VEY G+
Sbjct: 73 LLSEFN----VLKQVNHPHVIKLYGACSQDGPL----------------LLIVEYAKYGS 112
Query: 206 LKSYLIKNRR----------------------RKLAFKVVIQLALDLARGLSYLQSKKIV 243
L+ +L ++R+ R L +I A +++G+ YL K+V
Sbjct: 113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLV 172
Query: 244 HRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRK 301
HRD+ N+L+ + R +KI+DFG++R + G + +MA E L Y +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 302 CDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDA 360
DV+SFG+ LWEI PYP + E +++ R E P C + +M +CW
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIP-PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQ 291
Query: 361 NPDKRPEMDEVVAMLEAI 378
PDKRP ++ LE +
Sbjct: 292 EPDKRPVFADISKDLEKM 309
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 132/309 (42%), Gaps = 47/309 (15%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIA 144
++WE L G FG V G VAVK+L + EA ++
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L+ + H H N+ +GA T G + V+ EYC G
Sbjct: 99 ELKI-------MSHLGQHENIVNLLGAC---------THGGPV-------LVITEYCCYG 135
Query: 205 ALKSYLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTE 250
L ++L + R +L+ + ++ + +A+G+++L SK +HRDV
Sbjct: 136 DLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 195
Query: 251 NMLLDKTRTVKIADFGVAR--LEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFG 308
N+LL KI DFG+AR + SN + +MAPE + Y + DV+S+G
Sbjct: 196 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 255
Query: 309 ICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 367
I LWEI+ + PYP + + +V+ + P P ++ ++M+ CW P RP
Sbjct: 256 ILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 315
Query: 368 MDEVVAMLE 376
++ + L+
Sbjct: 316 FQQICSFLQ 324
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 136/293 (46%), Gaps = 35/293 (11%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRG---IYDGQDVAV--KLLDWGEESHRSEAEIASLRAA 149
E+D + + I+ G FG V G + +DVAV K L G + R
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ--------RRD 90
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPNV G G P +V+E+ GAL ++
Sbjct: 91 FLCEASIMGQFDHPNVVHLEGVVTR-------------GKP---VMIVIEFMENGALDAF 134
Query: 210 LIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR 269
L K+ + ++V L +A G+ YL VHRD+ N+L++ K++DFG++R
Sbjct: 135 LRKHDGQFTVIQLVGMLR-GIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSR 193
Query: 270 LEASNPHDMTGETG---TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLS 325
+ +P + TG + + APE + + DV+S+GI +WE+ + PY D+S
Sbjct: 194 VIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 253
Query: 326 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+V A + + R P CP+ L +M CW +RP+ +++V +L+ +
Sbjct: 254 NQDVIKA-IEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 132/307 (42%), Gaps = 45/307 (14%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIA 144
++WE L G FG V G VAVK+L + EA ++
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L+ + H H N+ +GA T G + V+ EYC G
Sbjct: 99 ELKI-------MSHLGQHENIVNLLGAC---------THGGPV-------LVITEYCCYG 135
Query: 205 ALKSYLIKNRR------------RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
L ++L + R L+ + ++ + +A+G+++L SK +HRDV N+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 253 LLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFGIC 310
LL KI DFG+AR ++ + + L +MAPE + Y + DV+S+GI
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 311 LWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 369
LWEI+ + PYP + + +V+ + P P ++ ++M+ CW P RP
Sbjct: 256 LWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 315
Query: 370 EVVAMLE 376
++ + L+
Sbjct: 316 QICSFLQ 322
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 135/293 (46%), Gaps = 35/293 (11%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIY--DGQ---DVAVKLLDWGEESHRSEAEIASLRAA 149
EI+ +++ I+ G G V G GQ VA+K L G + R
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ--------RRD 96
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G G + M +V EY G+L ++
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVT----------RGRLAM------IVTEYMENGSLDTF 140
Query: 210 LIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR 269
L + + ++ + + G+ YL VHRD+ N+L+D K++DFG++R
Sbjct: 141 L-RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
Query: 270 LEASNPHDMTGETG---TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLS 325
+ +P TG + + APE + ++ DV+SFG+ +WE+ + PY +++
Sbjct: 200 VLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT 259
Query: 326 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+V S+ V + R P CP +L +M CW + +RP ++V++L+A+
Sbjct: 260 NRDVISS-VEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 57/318 (17%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTV-------HRGIYDGQDVAVKLLDWGEESHRSEAEIAS 145
+WE L++ G FG V +G VAVK+L + + S +E+
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML----KENASPSELRD 72
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
L + F V +++HP+V K GA L ++VEY G+
Sbjct: 73 LLSEFN----VLKQVNHPHVIKLYGACSQDGPL----------------LLIVEYAKYGS 112
Query: 206 LKSYLIKNRR----------------------RKLAFKVVIQLALDLARGLSYLQSKKIV 243
L+ +L ++R+ R L +I A +++G+ YL K+V
Sbjct: 113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLV 172
Query: 244 HRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRK 301
HRD+ N+L+ + R +KI+DFG++R + G + +MA E L Y +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 302 CDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDA 360
DV+SFG+ LWEI PYP + E +++ R E P C + +M +CW
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIP-PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQ 291
Query: 361 NPDKRPEMDEVVAMLEAI 378
PDKRP ++ LE +
Sbjct: 292 EPDKRPVFADISKDLEKM 309
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 128/293 (43%), Gaps = 44/293 (15%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIASLRAAFTQEV 154
+I+G G FG V+ G G VAVK L E + E+ F E
Sbjct: 35 LIRG-LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEA 85
Query: 155 AVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR 214
+ K +H N+ + IG ++ + +P +++E GG LKS+L + R
Sbjct: 86 LIISKFNHQNIVRCIGVSLQS-------------LPR---FILLELMAGGDLKSFLRETR 129
Query: 215 RR-----KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFG 266
R LA ++ +A D+A G YL+ +HRD+ N LL R KI DFG
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 189
Query: 267 VARLEASNPHDMTGETGTLG--YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCD-MPYPD 323
+A+ + G L +M PE + K D +SFG+ LWEI+ MPYP
Sbjct: 190 MAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 249
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
S EV V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 250 KSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 134/303 (44%), Gaps = 50/303 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 69
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL K++ R
Sbjct: 70 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQKHKERIDHI 115
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPH---- 276
K+ +Q + +G+ YL +K+ +HR++ T N+L++ VKI DFG+ ++ +
Sbjct: 116 KL-LQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV 174
Query: 277 DMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 175 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 233
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+++ N R P CP + +M CW+ N ++RP ++ ++ I +
Sbjct: 234 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 293
Query: 382 KGG 384
G
Sbjct: 294 MAG 296
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 135/279 (48%), Gaps = 42/279 (15%)
Query: 100 KLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
K I KG FA+ R I G++VAVK++D +++ +SL+ F +EV +
Sbjct: 20 KTIGKGNFAKVKLA---RHILTGKEVAVKIID------KTQLNSSSLQKLF-REVRIMKV 69
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI-----KNR 214
L+HPN+ K I+T+ +V+EY GG + YL+ K +
Sbjct: 70 LNHPNIVKLFEV--------IETEKT--------LYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
+ F+ ++ + Y K IVHRD+K EN+LLD +KIADFG + E +
Sbjct: 114 EARAKFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTF 165
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYN-RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 333
+ + G+ Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V
Sbjct: 166 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+R R IP + N++K+ NP KR +++++
Sbjct: 226 LRGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 134/279 (48%), Gaps = 42/279 (15%)
Query: 100 KLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
K I KG FA+ R I G++VAVK++D +++ +SL+ F +EV +
Sbjct: 20 KTIGKGNFAKVKLA---RHILTGKEVAVKIID------KTQLNSSSLQKLF-REVRIMKV 69
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI-----KNR 214
L+HPN+ K I+T+ +V+EY GG + YL+ K +
Sbjct: 70 LNHPNIVKLFEV--------IETEKT--------LYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
+ F+ ++ + Y K IVHRD+K EN+LLD +KIADFG + E +
Sbjct: 114 EARAKFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTF 165
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYN-RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 333
+ + G Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V
Sbjct: 166 GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+R R IP + N++K+ NP KR +++++
Sbjct: 226 LRGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FGTV +G Y + + + ++EA +L+ E V +LD+P +
Sbjct: 19 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ IG S + +V+E G L YL +NR K K +I+L
Sbjct: 76 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 116
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET---G 283
++ G+ YL+ VHRD+ N+LL KI+DFG+++ ++ + +T
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEI 342
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 235
Query: 343 PRCCPSSLANVMKRCWDANPDKRP 366
P CP + ++M CW + + RP
Sbjct: 236 PAGCPREMYDLMNLCWTYDVENRP 259
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 22/300 (7%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIA 144
++WE L G FG V G VAVK+L + EA ++
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 83
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L+ + H H N+ +GA + + T+ G NF E G
Sbjct: 84 ELKI-------MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGP 136
Query: 205 ALK-----SYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT 259
+L L K R L + ++ + +A+G+++L SK +HRDV N+LL
Sbjct: 137 SLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 196
Query: 260 VKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
KI DFG+AR ++ + + L +MAPE + Y + DV+S+GI LWEI+
Sbjct: 197 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 256
Query: 318 DM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
+ PYP + + +V+ + P P ++ ++M+ CW P RP ++ + L+
Sbjct: 257 GLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 135/279 (48%), Gaps = 42/279 (15%)
Query: 100 KLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
K I KG FA+ R I G++VAVK++D +++ +SL+ F +EV +
Sbjct: 20 KTIGKGNFAKVKLA---RHILTGKEVAVKIID------KTQLNSSSLQKLF-REVRIMKV 69
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI-----KNR 214
L+HPN+ K I+T+ +V+EY GG + YL+ K +
Sbjct: 70 LNHPNIVKLFEV--------IETEKT--------LYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
+ F+ ++ + Y K IVHRD+K EN+LLD +KIADFG + E +
Sbjct: 114 EARAKFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTF 165
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYN-RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 333
+ + G+ Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V
Sbjct: 166 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+R R IP + N++K+ NP KR +++++
Sbjct: 226 LRGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 135/279 (48%), Gaps = 42/279 (15%)
Query: 100 KLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
K I KG FA+ R I G++VAVK++D +++ +SL+ F +EV +
Sbjct: 13 KTIGKGNFAKVKLA---RHILTGKEVAVKIID------KTQLNSSSLQKLF-REVRIMKV 62
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI-----KNR 214
L+HPN+ K I+T+ +V+EY GG + YL+ K +
Sbjct: 63 LNHPNIVKLFEV--------IETEKT--------LYLVMEYASGGEVFDYLVAHGWMKEK 106
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
+ F+ ++ + Y K IVHRD+K EN+LLD +KIADFG + E +
Sbjct: 107 EARAKFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTF 158
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYN-RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 333
+ + G+ Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V
Sbjct: 159 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 218
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+R R IP + N++K+ NP KR +++++
Sbjct: 219 LRGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQIM 255
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 132/307 (42%), Gaps = 45/307 (14%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQ-------DVAVKLLDWGEESHRSEAEIA 144
++WE L G FG V G VAVK+L + EA ++
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
L+ + H H N+ +GA T G + V+ EYC G
Sbjct: 99 ELKI-------MSHLGQHENIVNLLGAC---------THGGPV-------LVITEYCCYG 135
Query: 205 ALKSYLIKNRR---RKLAFKV---------VIQLALDLARGLSYLQSKKIVHRDVKTENM 252
L ++L + R AF + ++ + +A+G+++L SK +HRDV N+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 253 LLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRKCDVYSFGIC 310
LL KI DFG+AR ++ + + L +MAPE + Y + DV+S+GI
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 311 LWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 369
LWEI+ + PYP + + +V+ + P P ++ ++M+ CW P RP
Sbjct: 256 LWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 315
Query: 370 EVVAMLE 376
++ + L+
Sbjct: 316 QICSFLQ 322
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 50/283 (17%)
Query: 100 KLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
K I KG FA+ R I G++VA+K++D +++ SL+ F +EV +
Sbjct: 18 KTIGKGNFAKVKLA---RHILTGREVAIKIID------KTQLNPTSLQKLF-REVRIMKI 67
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI-----KNR 214
L+HPN+ K I+T+ +++EY GG + YL+ K +
Sbjct: 68 LNHPNIVKLFEV--------IETEKT--------LYLIMEYASGGEVFDYLVAHGRMKEK 111
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
+ F+ ++ + Y K+IVHRD+K EN+LLD +KIADFG SN
Sbjct: 112 EARSKFRQIVS-------AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGF-----SN 159
Query: 275 PHDMTGETGTL----GYMAPEVLNGSAYN-RKCDVYSFGICLWEIYCCDMPYPDLSFSEV 329
+ G+ T Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+
Sbjct: 160 EFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 219
Query: 330 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
V+R R IP + N++KR NP KR +++++
Sbjct: 220 RERVLRGKYR--IPFYMSTDCENLLKRFLVLNPIKRGTLEQIM 260
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FGTV +G Y + + + ++EA +L+ E V +LD+P +
Sbjct: 25 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ IG S + +V+E G L YL +NR K K +I+L
Sbjct: 82 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 122
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET---G 283
++ G+ YL+ VHRD+ N+LL KI+DFG+++ ++ + +T
Sbjct: 123 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 241
Query: 343 PRCCPSSLANVMKRCWDANPDKRP 366
P CP + ++M CW + + RP
Sbjct: 242 PAGCPREMYDLMNLCWTYDVENRP 265
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FGTV +G Y + + + ++EA +L+ E V +LD+P +
Sbjct: 33 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ IG S + +V+E G L YL +NR K K +I+L
Sbjct: 90 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 130
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG--- 283
++ G+ YL+ VHRD+ N+LL KI+DFG+++ ++ + +T
Sbjct: 131 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEI 342
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 249
Query: 343 PRCCPSSLANVMKRCWDANPDKRP 366
P CP + ++M CW + + RP
Sbjct: 250 PAGCPREMYDLMNLCWTYDVENRP 273
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FGTV +G Y + + + ++EA +L+ E V +LD+P +
Sbjct: 378 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ IG S + +V+E G L YL +NR K K +I+L
Sbjct: 435 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 475
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG--- 283
++ G+ YL+ VHRD+ N+LL KI+DFG+++ ++ + +T
Sbjct: 476 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEI 342
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 594
Query: 343 PRCCPSSLANVMKRCWDANPDKRP 366
P CP + ++M CW + + RP
Sbjct: 595 PAGCPREMYDLMNLCWTYDVENRP 618
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FGTV +G Y + + + ++EA +L+ E V +LD+P +
Sbjct: 13 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ IG S + +V+E G L YL +NR K K +I+L
Sbjct: 70 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 110
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET---G 283
++ G+ YL+ VHRD+ N+LL KI+DFG+++ ++ + +T
Sbjct: 111 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEI 342
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 229
Query: 343 PRCCPSSLANVMKRCWDANPDKRP 366
P CP + ++M CW + + RP
Sbjct: 230 PAGCPREMYDLMNLCWTYDVENRP 253
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FGTV +G Y + + + ++EA +L+ E V +LD+P +
Sbjct: 19 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ IG S + +V+E G L YL +NR K K +I+L
Sbjct: 76 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 116
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET---G 283
++ G+ YL+ VHRD+ N+LL KI+DFG+++ ++ + +T
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 235
Query: 343 PRCCPSSLANVMKRCWDANPDKRP 366
P CP + ++M CW + + RP
Sbjct: 236 PAGCPREMYDLMNLCWTYDVENRP 259
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FGTV +G Y + + + ++EA +L+ E V +LD+P +
Sbjct: 377 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ IG S + +V+E G L YL +NR K K +I+L
Sbjct: 434 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 474
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG--- 283
++ G+ YL+ VHRD+ N+LL KI+DFG+++ ++ + +T
Sbjct: 475 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEI 342
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 593
Query: 343 PRCCPSSLANVMKRCWDANPDKRP 366
P CP + ++M CW + + RP
Sbjct: 594 PAGCPREMYDLMNLCWTYDVENRP 617
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FGTV +G Y + + + ++EA +L+ E V +LD+P +
Sbjct: 35 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ IG S + +V+E G L YL +NR K K +I+L
Sbjct: 92 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 132
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG--- 283
++ G+ YL+ VHRD+ N+LL KI+DFG+++ ++ + +T
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 251
Query: 343 PRCCPSSLANVMKRCWDANPDKRP 366
P CP + ++M CW + + RP
Sbjct: 252 PAGCPREMYDLMNLCWTYDVENRP 275
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FGTV +G Y + + + ++EA +L+ E V +LD+P +
Sbjct: 35 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ IG S + +V+E G L YL +NR K K +I+L
Sbjct: 92 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 132
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG--- 283
++ G+ YL+ VHRD+ N+LL KI+DFG+++ ++ + +T
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 251
Query: 343 PRCCPSSLANVMKRCWDANPDKRP 366
P CP + ++M CW + + RP
Sbjct: 252 PAGCPREMYDLMNLCWTYDVENRP 275
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FGTV +G Y + + + ++EA +L+ E V +LD+P +
Sbjct: 15 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ IG S + +V+E G L YL +NR K K +I+L
Sbjct: 72 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 112
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET---G 283
++ G+ YL+ VHRD+ N+LL KI+DFG+++ ++ + +T
Sbjct: 113 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 231
Query: 343 PRCCPSSLANVMKRCWDANPDKRP 366
P CP + ++M CW + + RP
Sbjct: 232 PAGCPREMYDLMNLCWTYDVENRP 255
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 140/318 (44%), Gaps = 57/318 (17%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTV-------HRGIYDGQDVAVKLLDWGEESHRSEAEIAS 145
+WE L++ G FG V +G VAVK+L + + S +E+
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML----KENASPSELRD 72
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
L + F V +++HP+V K GA + +G + ++VEY G+
Sbjct: 73 LLSEFN----VLKQVNHPHVIKLYGAC---------SQDGPL-------LLIVEYAKYGS 112
Query: 206 LKSYLIKNRR----------------------RKLAFKVVIQLALDLARGLSYLQSKKIV 243
L+ +L ++R+ R L +I A +++G+ YL +V
Sbjct: 113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLV 172
Query: 244 HRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNRK 301
HRD+ N+L+ + R +KI+DFG++R + G + +MA E L Y +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 302 CDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDA 360
DV+SFG+ LWEI PYP + E +++ R E P C + +M +CW
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIP-PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQ 291
Query: 361 NPDKRPEMDEVVAMLEAI 378
PDKRP ++ LE +
Sbjct: 292 EPDKRPVFADISKDLEKM 309
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 127/293 (43%), Gaps = 35/293 (11%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
EID + + I+ G FG V G VA+K L G + R
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--------RRD 61
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ G + I + EY G+L ++
Sbjct: 62 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMI----------------ITEYMENGSLDAF 105
Query: 210 LIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR 269
L KN R ++V L + G+ YL VHRD+ N+L++ K++DFG++R
Sbjct: 106 LRKNDGRFTVIQLVGMLR-GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR 164
Query: 270 LEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLS 325
+ +P + G + + APE + + DV+S+GI +WE+ + PY D+S
Sbjct: 165 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 224
Query: 326 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+V A + + R P CP +L +M CW RP+ ++V ML+ +
Sbjct: 225 NQDVIKA-IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 135/279 (48%), Gaps = 42/279 (15%)
Query: 100 KLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
K I KG FA+ R I G++VAV+++D +++ +SL+ F +EV +
Sbjct: 20 KTIGKGNFAKVKLA---RHILTGKEVAVRIID------KTQLNSSSLQKLF-REVRIMKV 69
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI-----KNR 214
L+HPN+ K I+T+ +V+EY GG + YL+ K +
Sbjct: 70 LNHPNIVKLFEV--------IETEKT--------LYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
+ F+ ++ + Y K IVHRD+K EN+LLD +KIADFG + E +
Sbjct: 114 EARAKFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTF 165
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYN-RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 333
+ + G+ Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V
Sbjct: 166 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+R R IP + N++K+ NP KR +++++
Sbjct: 226 LRGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 132/303 (43%), Gaps = 50/303 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+G FG+V YD G+ VAVK L E H + F +E+ + L
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---------FEREIEILKSL 71
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G N++ +++EY G+L+ YL + R
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRDYLQAHAERIDHI 117
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K+ +Q + +G+ YL +K+ +HRD+ T N+L++ VKI DFG+ ++ +
Sbjct: 118 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 280 ---GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVTS--- 331
GE+ Y APE L S ++ DV+SFG+ L+E+ Y P F +
Sbjct: 177 KEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 235
Query: 332 ----------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTS 381
+++ N R P CP + +M CW+ N ++RP ++ ++ I +
Sbjct: 236 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 295
Query: 382 KGG 384
G
Sbjct: 296 MAG 298
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 127/293 (43%), Gaps = 35/293 (11%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
EID + + I+ G FG V G VA+K L G + R
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--------RRD 76
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ G + I + EY G+L ++
Sbjct: 77 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMI----------------ITEYMENGSLDAF 120
Query: 210 LIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR 269
L KN R ++V L + G+ YL VHRD+ N+L++ K++DFG++R
Sbjct: 121 LRKNDGRFTVIQLVGMLR-GIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSR 179
Query: 270 LEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLS 325
+ +P + G + + APE + + DV+S+GI +WE+ + PY D+S
Sbjct: 180 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 239
Query: 326 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+V A + + R P CP +L +M CW RP+ ++V ML+ +
Sbjct: 240 NQDVIKA-IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 135/279 (48%), Gaps = 42/279 (15%)
Query: 100 KLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
K I KG FA+ R I G++VAV+++D +++ +SL+ F +EV +
Sbjct: 20 KTIGKGNFAKVKLA---RHILTGKEVAVRIID------KTQLNSSSLQKLF-REVRIMKV 69
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI-----KNR 214
L+HPN+ K I+T+ +V+EY GG + YL+ K +
Sbjct: 70 LNHPNIVKLFEV--------IETEKT--------LYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
+ F+ ++ + Y K IVHRD+K EN+LLD +KIADFG + E +
Sbjct: 114 EARAKFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTF 165
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYN-RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 333
+ + G+ Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V
Sbjct: 166 GNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+R R IP + N++K+ NP KR +++++
Sbjct: 226 LRGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 42/279 (15%)
Query: 100 KLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
K I KG FA+ R I G++VA+K++D +++ SL+ F +EV +
Sbjct: 21 KTIGKGNFAKVKLA---RHILTGREVAIKIID------KTQLNPTSLQKLF-REVRIMKI 70
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI-----KNR 214
L+HPN+ K I+T+ +++EY GG + YL+ K +
Sbjct: 71 LNHPNIVKLFEV--------IETEKT--------LYLIMEYASGGEVFDYLVAHGRMKEK 114
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
+ F+ ++ + Y K+IVHRD+K EN+LLD +KIADFG + E +
Sbjct: 115 EARSKFRQIVS-------AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN-EFTV 166
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYN-RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 333
+ G Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V
Sbjct: 167 GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 226
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+R R IP + N++KR NP KR +++++
Sbjct: 227 LRGKYR--IPFYMSTDCENLLKRFLVLNPIKRGTLEQIM 263
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 127/293 (43%), Gaps = 35/293 (11%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
EID + + I+ G FG V G VA+K L G + R
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--------RRD 55
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ G + I + EY G+L ++
Sbjct: 56 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMI----------------ITEYMENGSLDAF 99
Query: 210 LIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR 269
L KN R ++V L + G+ YL VHRD+ N+L++ K++DFG++R
Sbjct: 100 LRKNDGRFTVIQLVGMLR-GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR 158
Query: 270 LEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLS 325
+ +P + G + + APE + + DV+S+GI +WE+ + PY D+S
Sbjct: 159 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 218
Query: 326 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+V A + + R P CP +L +M CW RP+ ++V ML+ +
Sbjct: 219 NQDVIKA-IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 47/300 (15%)
Query: 95 EIDPAKLIIKGAFARGTFGTV---------HRGIYDGQDVAVKLLDWGEESHRSEAEIAS 145
EID + + I+ G FG V R I+ VA+K L G +
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIF----VAIKTLKSGYTEKQ------- 51
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
R F E ++ + DHPNV G ++ + ++ E+ G+
Sbjct: 52 -RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV----------------MIITEFMENGS 94
Query: 206 LKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADF 265
L S+L +N + ++V L +A G+ YL VHR + N+L++ K++DF
Sbjct: 95 LDSFLRQNDGQFTVIQLVGMLR-GIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDF 153
Query: 266 GVARLEASNPHDMTGETGTLG------YMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-D 318
G++R + D T T LG + APE + + DV+S+GI +WE+ +
Sbjct: 154 GLSRFLEDDTSDPT-YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 212
Query: 319 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
PY D++ +V +A + Q+ R P CPS+L +M CW + + RP+ ++V L+ +
Sbjct: 213 RPYWDMTNQDVINA-IEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 110 GTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
G+FG V RG +D VAVK L + S+ E F +EV H LDH N
Sbjct: 29 GSFGVVRRGEWDAPSGKTVSVAVKCL---KPDVLSQPEAMD---DFIREVNAMHSLDHRN 82
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ + G + T + + V E G+L L K++ L +
Sbjct: 83 LIRLYGVVL-TPPMKM----------------VTELAPLGSLLDRLRKHQGHFL-LGTLS 124
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASNPHDMTGE-- 281
+ A+ +A G+ YL+SK+ +HRD+ N+LL VKI DFG+ R L ++ H + E
Sbjct: 125 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHR 184
Query: 282 TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRP 340
+ APE L ++ D + FG+ LWE++ P+ L+ S++ + ++ R
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 244
Query: 341 EIPRCCPSSLANVMKRCWDANPDKRP 366
P CP + NVM +CW P+ RP
Sbjct: 245 PRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 39/300 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
E+D + I G FG V G VA+K L G + R
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--------RRD 63
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G + + I V E G+L S+
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMI----------------VTEXMENGSLDSF 107
Query: 210 LIKNRRRKLAFKVV--IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
L R+ F V+ + + +A G+ YL VHRD+ N+L++ K++DFG+
Sbjct: 108 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 164
Query: 268 ARLEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPD 323
+R+ +P + G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 165 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 224
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
+S +V A V + R P CP++L +M CW + + RP+ +++V++L+ + + G
Sbjct: 225 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 283
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 132/278 (47%), Gaps = 42/278 (15%)
Query: 100 KLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
K I KG FA+ R I G++VAVK++D +++ +SL+ F +EV +
Sbjct: 20 KTIGKGNFAKVKLA---RHILTGKEVAVKIID------KTQLNSSSLQKLF-REVRIXKV 69
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRK-- 217
L+HPN+ K I+T+ +V EY GG + YL+ + R K
Sbjct: 70 LNHPNIVKLFEV--------IETEKT--------LYLVXEYASGGEVFDYLVAHGRXKEK 113
Query: 218 ---LAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
F+ ++ + Y K IVHRD+K EN+LLD +KIADFG + E +
Sbjct: 114 EARAKFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSN-EFTF 165
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYN-RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 333
+ + G Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V
Sbjct: 166 GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 371
+R R IP + N++K+ NP KR ++++
Sbjct: 226 LRGKYR--IPFYXSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 39/300 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
E+D + I G FG V G VA+K L G + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--------RRD 92
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G + + I V E G+L S+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMI----------------VTEXMENGSLDSF 136
Query: 210 LIKNRRRKLAFKVV--IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
L R+ F V+ + + +A G+ YL VHRD+ N+L++ K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 268 ARLEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPD 323
+R+ +P + G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
+S +V A V + R P CP++L +M CW + + RP+ +++V++L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 39/300 (13%)
Query: 95 EIDPAKLIIKGAFARGTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAA 149
E+D + I G FG V G VA+K L G + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--------RRD 92
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F E ++ + DHPN+ + G + + I V E G+L S+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMI----------------VTEXMENGSLDSF 136
Query: 210 LIKNRRRKLAFKVV--IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
L R+ F V+ + + +A G+ YL VHRD+ N+L++ K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGL 193
Query: 268 ARLEASNP---HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPD 323
+R+ +P + G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 324 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
+S +V A V + R P CP++L +M CW + + RP+ +++V++L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 37/268 (13%)
Query: 110 GTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
G+FG V RG +D VAVK L + S+ E F +EV H LDH N
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCL---KPDVLSQPEAMD---DFIREVNAMHSLDHRN 72
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKV-- 222
+ + G + T + + T+ +G S L + R+ + F +
Sbjct: 73 LIRLYGVVL-TPPMKMVTELAPLG-------------------SLLDRLRKHQGHFLLGT 112
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASNPHDMTGE 281
+ + A+ +A G+ YL+SK+ +HRD+ N+LL VKI DFG+ R L ++ H + E
Sbjct: 113 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE 172
Query: 282 --TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNL 338
+ APE L ++ D + FG+ LWE++ P+ L+ S++ + ++
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 232
Query: 339 RPEIPRCCPSSLANVMKRCWDANPDKRP 366
R P CP + NVM +CW P+ RP
Sbjct: 233 RLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 148/325 (45%), Gaps = 65/325 (20%)
Query: 101 LIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEE-SHRSEAEIASLRAAFTQEVAVWHK 159
++++ + +G FG V RG + G++VAVK+ EE S EAEI Q V
Sbjct: 5 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEI-------YQTVM---- 53
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA 219
L H N+ FI A DN G + +V +Y G+L YL R +
Sbjct: 54 LRHENILGFIAA-----------DNKDNGTWTQLW-LVSDYHEHGSLFDYL---NRYTVT 98
Query: 220 FKVVIQLALDLARGLSYLQSK--------KIVHRDVKTENMLLDKTRTVKIADFGVA--R 269
+ +I+LAL A GL++L + I HRD+K++N+L+ K T IAD G+A
Sbjct: 99 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158
Query: 270 LEASNPHDMT--GETGTLGYMAPEVLNGSA------YNRKCDVYSFGICLWEIY--CC-- 317
A++ D+ GT YMAPEVL+ S ++ D+Y+ G+ WEI C
Sbjct: 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 218
Query: 318 ------DMPYPDL-----SFSEVTSAVVRQNLRPEIP---RCCPS--SLANVMKRCWDAN 361
+PY DL S E+ V Q LRP IP + C + +A +M+ CW AN
Sbjct: 219 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 278
Query: 362 PDKRPEMDEVVAMLEAIDTSKGGGM 386
R + L + +G M
Sbjct: 279 GAARLTALRIKKTLSQLSQQEGIKM 303
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 37/268 (13%)
Query: 110 GTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
G+FG V RG +D VAVK L + S+ E F +EV H LDH N
Sbjct: 29 GSFGVVRRGEWDAPSGKTVSVAVKCL---KPDVLSQPEAMD---DFIREVNAMHSLDHRN 82
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKV-- 222
+ + G + T + + T+ +G S L + R+ + F +
Sbjct: 83 LIRLYGVVL-TPPMKMVTELAPLG-------------------SLLDRLRKHQGHFLLGT 122
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASNPHDMTGE 281
+ + A+ +A G+ YL+SK+ +HRD+ N+LL VKI DFG+ R L ++ H + E
Sbjct: 123 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 182
Query: 282 --TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNL 338
+ APE L ++ D + FG+ LWE++ P+ L+ S++ + ++
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 242
Query: 339 RPEIPRCCPSSLANVMKRCWDANPDKRP 366
R P CP + NVM +CW P+ RP
Sbjct: 243 RLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 135/278 (48%), Gaps = 38/278 (13%)
Query: 106 AFARGTFGTVHRGIY--DGQDV----AVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
G FGTV++GI+ +G+ V A+K+L+ E+ +A + F E +
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILN---ETTGPKANVE-----FMDEALIMAS 96
Query: 160 LDHPNVTKFIGATMG-TSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKL 218
+DHP++ + +G + T +L Q MP ++EY H + +
Sbjct: 97 MDHPHLVRLLGVCLSPTIQLVTQL------MPHG---CLLEYVH----------EHKDNI 137
Query: 219 AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDM 278
++++ + +A+G+ YL+ +++VHRD+ N+L+ VKI DFG+ARL + +
Sbjct: 138 GSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 197
Query: 279 TGETGTL--GYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVR 335
+ G + +MA E ++ + + DV+S+G+ +WE+ PY + E+ + +
Sbjct: 198 NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK 257
Query: 336 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
P+ P C + VM +CW + D RP+ E+ A
Sbjct: 258 GERLPQ-PPICTIDVYMVMVKCWMIDADSRPKFKELAA 294
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 135/278 (48%), Gaps = 38/278 (13%)
Query: 106 AFARGTFGTVHRGIY--DGQDV----AVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
G FGTV++GI+ +G+ V A+K+L+ E+ +A + F E +
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILN---ETTGPKANVE-----FMDEALIMAS 73
Query: 160 LDHPNVTKFIGATMG-TSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKL 218
+DHP++ + +G + T +L Q MP ++EY H + +
Sbjct: 74 MDHPHLVRLLGVCLSPTIQLVTQL------MPHG---CLLEYVH----------EHKDNI 114
Query: 219 AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDM 278
++++ + +A+G+ YL+ +++VHRD+ N+L+ VKI DFG+ARL + +
Sbjct: 115 GSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 174
Query: 279 TGETGTL--GYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVR 335
+ G + +MA E ++ + + DV+S+G+ +WE+ PY + E+ + +
Sbjct: 175 NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK 234
Query: 336 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
P+ P C + VM +CW + D RP+ E+ A
Sbjct: 235 GERLPQ-PPICTIDVYMVMVKCWMIDADSRPKFKELAA 271
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 110 GTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
G+FG V RG +D VAVK L + S+ E F +EV H LDH N
Sbjct: 23 GSFGVVRRGEWDAPSGKTVSVAVKCL---KPDVLSQPEAMD---DFIREVNAMHSLDHRN 76
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ + G + T + + V E G+L L K++ L +
Sbjct: 77 LIRLYGVVL-TPPMKM----------------VTELAPLGSLLDRLRKHQGHFL-LGTLS 118
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASNPHDMTGE-- 281
+ A+ +A G+ YL+SK+ +HRD+ N+LL VKI DFG+ R L ++ H + E
Sbjct: 119 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 178
Query: 282 TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRP 340
+ APE L ++ D + FG+ LWE++ P+ L+ S++ + ++ R
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 238
Query: 341 EIPRCCPSSLANVMKRCWDANPDKRP 366
P CP + NVM +CW P+ RP
Sbjct: 239 PRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 148/325 (45%), Gaps = 65/325 (20%)
Query: 101 LIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEE-SHRSEAEIASLRAAFTQEVAVWHK 159
++++ + +G FG V RG + G++VAVK+ EE S EAEI Q V
Sbjct: 8 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEI-------YQTVM---- 56
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA 219
L H N+ FI A DN G + +V +Y G+L YL R +
Sbjct: 57 LRHENILGFIAA-----------DNKDNGTWTQLW-LVSDYHEHGSLFDYL---NRYTVT 101
Query: 220 FKVVIQLALDLARGLSYLQSK--------KIVHRDVKTENMLLDKTRTVKIADFGVA--R 269
+ +I+LAL A GL++L + I HRD+K++N+L+ K T IAD G+A
Sbjct: 102 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 161
Query: 270 LEASNPHDMT--GETGTLGYMAPEVLNGSAYN------RKCDVYSFGICLWEIY--CC-- 317
A++ D+ GT YMAPEVL+ S ++ D+Y+ G+ WEI C
Sbjct: 162 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 221
Query: 318 ------DMPYPDL-----SFSEVTSAVVRQNLRPEIP---RCCPS--SLANVMKRCWDAN 361
+PY DL S E+ V Q LRP IP + C + +A +M+ CW AN
Sbjct: 222 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 281
Query: 362 PDKRPEMDEVVAMLEAIDTSKGGGM 386
R + L + +G M
Sbjct: 282 GAARLTALRIKKTLSQLSQQEGIKM 306
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 147/322 (45%), Gaps = 65/322 (20%)
Query: 101 LIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEE-SHRSEAEIASLRAAFTQEVAVWHK 159
++++ + +G FG V RG + G++VAVK+ EE S EAEI Q V
Sbjct: 6 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEI-------YQTVM---- 54
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA 219
L H N+ FI A DN G + +V +Y G+L YL R +
Sbjct: 55 LRHENILGFIAA-----------DNKDNGTWTQLW-LVSDYHEHGSLFDYL---NRYTVT 99
Query: 220 FKVVIQLALDLARGLSYLQSK--------KIVHRDVKTENMLLDKTRTVKIADFGVA--R 269
+ +I+LAL A GL++L + I HRD+K++N+L+ K T IAD G+A
Sbjct: 100 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 159
Query: 270 LEASNPHDM--TGETGTLGYMAPEVLNGSA------YNRKCDVYSFGICLWEIY--CC-- 317
A++ D+ GT YMAPEVL+ S ++ D+Y+ G+ WEI C
Sbjct: 160 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 219
Query: 318 ------DMPYPDL-----SFSEVTSAVVRQNLRPEIP---RCCPS--SLANVMKRCWDAN 361
+PY DL S E+ V Q LRP IP + C + +A +M+ CW AN
Sbjct: 220 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 279
Query: 362 PDKRPEMDEVVAMLEAIDTSKG 383
R + L + +G
Sbjct: 280 GAARLTALRIKKTLSQLSQQEG 301
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP-HDMTGE 281
+I + +ARG+ +L S+K +HRD+ N+LL + VKI DFG+AR NP + G+
Sbjct: 201 LISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGD 260
Query: 282 TGT-LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLR 339
T L +MAPE + Y+ K DV+S+G+ LWEI+ PYP + E + +R+ +R
Sbjct: 261 TRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMR 320
Query: 340 PEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAML 375
P + +M CW +P +RP E+V L
Sbjct: 321 MRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 51/129 (39%), Gaps = 29/129 (22%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIAS 145
+WE +L + + RG FG V + G + VAVK+L G A +
Sbjct: 21 KWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEG-------ATASE 73
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
+A T+ + H H NV +GA T G M V+VEYC G
Sbjct: 74 YKALMTELKILTHIGHHLNVVNLLGAC---------TKQGGPLM------VIVEYCKYGN 118
Query: 206 LKSYLIKNR 214
L +YL R
Sbjct: 119 LSNYLKSKR 127
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 37/268 (13%)
Query: 110 GTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
G+FG V RG +D VAVK L + S+ E F +EV H LDH N
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCL---KPDVLSQPEAMD---DFIREVNAMHSLDHRN 72
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKV-- 222
+ + G + T + + T+ +G S L + R+ + F +
Sbjct: 73 LIRLYGVVL-TPPMKMVTELAPLG-------------------SLLDRLRKHQGHFLLGT 112
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASNPHDMTGE 281
+ + A+ +A G+ YL+SK+ +HRD+ N+LL VKI DFG+ R L ++ H + E
Sbjct: 113 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 172
Query: 282 --TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNL 338
+ APE L ++ D + FG+ LWE++ P+ L+ S++ + ++
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 232
Query: 339 RPEIPRCCPSSLANVMKRCWDANPDKRP 366
R P CP + NVM +CW P+ RP
Sbjct: 233 RLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 37/268 (13%)
Query: 110 GTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
G+FG V RG +D VAVK L + S+ E F +EV H LDH N
Sbjct: 23 GSFGVVRRGEWDAPSGKTVSVAVKCL---KPDVLSQPEAMD---DFIREVNAMHSLDHRN 76
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKV-- 222
+ + G + T + + T+ +G S L + R+ + F +
Sbjct: 77 LIRLYGVVL-TPPMKMVTELAPLG-------------------SLLDRLRKHQGHFLLGT 116
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASNPHDMTGE 281
+ + A+ +A G+ YL+SK+ +HRD+ N+LL VKI DFG+ R L ++ H + E
Sbjct: 117 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 176
Query: 282 --TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNL 338
+ APE L ++ D + FG+ LWE++ P+ L+ S++ + ++
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 236
Query: 339 RPEIPRCCPSSLANVMKRCWDANPDKRP 366
R P CP + NVM +CW P+ RP
Sbjct: 237 RLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 37/268 (13%)
Query: 110 GTFGTVHRGIYDGQD-----VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
G+FG V RG +D VAVK L + S+ E F +EV H LDH N
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCL---KPDVLSQPEAMD---DFIREVNAMHSLDHRN 72
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKV-- 222
+ + G + T + + T+ +G S L + R+ + F +
Sbjct: 73 LIRLYGVVL-TPPMKMVTELAPLG-------------------SLLDRLRKHQGHFLLGT 112
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASNPHDMTGE 281
+ + A+ +A G+ YL+SK+ +HRD+ N+LL VKI DFG+ R L ++ H + E
Sbjct: 113 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 172
Query: 282 --TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNL 338
+ APE L ++ D + FG+ LWE++ P+ L+ S++ + ++
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 232
Query: 339 RPEIPRCCPSSLANVMKRCWDANPDKRP 366
R P CP + NVM +CW P+ RP
Sbjct: 233 RLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 148/325 (45%), Gaps = 65/325 (20%)
Query: 101 LIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEE-SHRSEAEIASLRAAFTQEVAVWHK 159
++++ + +G FG V RG + G++VAVK+ EE S EAEI Q V
Sbjct: 11 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEI-------YQTVM---- 59
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA 219
L H N+ FI A DN G + +V +Y G+L YL R +
Sbjct: 60 LRHENILGFIAA-----------DNKDNGTWTQLW-LVSDYHEHGSLFDYL---NRYTVT 104
Query: 220 FKVVIQLALDLARGLSYLQSK--------KIVHRDVKTENMLLDKTRTVKIADFGVA--R 269
+ +I+LAL A GL++L + I HRD+K++N+L+ K T IAD G+A
Sbjct: 105 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 164
Query: 270 LEASNPHDMT--GETGTLGYMAPEVLNGSAYN------RKCDVYSFGICLWEIY--CC-- 317
A++ D+ GT YMAPEVL+ S ++ D+Y+ G+ WEI C
Sbjct: 165 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 224
Query: 318 ------DMPYPDL-----SFSEVTSAVVRQNLRPEIP---RCCPS--SLANVMKRCWDAN 361
+PY DL S E+ V Q LRP IP + C + +A +M+ CW AN
Sbjct: 225 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 284
Query: 362 PDKRPEMDEVVAMLEAIDTSKGGGM 386
R + L + +G M
Sbjct: 285 GAARLTALRIKKTLSQLSQQEGIKM 309
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 148/325 (45%), Gaps = 65/325 (20%)
Query: 101 LIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEE-SHRSEAEIASLRAAFTQEVAVWHK 159
++++ + +G FG V RG + G++VAVK+ EE S EAEI Q V
Sbjct: 44 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEI-------YQTVM---- 92
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA 219
L H N+ FI A DN G + +V +Y G+L YL R +
Sbjct: 93 LRHENILGFIAA-----------DNKDNGTWTQLW-LVSDYHEHGSLFDYL---NRYTVT 137
Query: 220 FKVVIQLALDLARGLSYLQSK--------KIVHRDVKTENMLLDKTRTVKIADFGVA--R 269
+ +I+LAL A GL++L + I HRD+K++N+L+ K T IAD G+A
Sbjct: 138 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 197
Query: 270 LEASNPHDMT--GETGTLGYMAPEVLNGSA------YNRKCDVYSFGICLWEIY--CC-- 317
A++ D+ GT YMAPEVL+ S ++ D+Y+ G+ WEI C
Sbjct: 198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 257
Query: 318 ------DMPYPDL-----SFSEVTSAVVRQNLRPEIP---RCCPS--SLANVMKRCWDAN 361
+PY DL S E+ V Q LRP IP + C + +A +M+ CW AN
Sbjct: 258 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 317
Query: 362 PDKRPEMDEVVAMLEAIDTSKGGGM 386
R + L + +G M
Sbjct: 318 GAARLTALRIKKTLSQLSQQEGIKM 342
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 147/322 (45%), Gaps = 65/322 (20%)
Query: 101 LIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEE-SHRSEAEIASLRAAFTQEVAVWHK 159
++++ + +G FG V RG + G++VAVK+ EE S EAEI Q V
Sbjct: 31 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEI-------YQTVM---- 79
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA 219
L H N+ FI A DN G + +V +Y G+L YL R +
Sbjct: 80 LRHENILGFIAA-----------DNKDNGTWTQLW-LVSDYHEHGSLFDYL---NRYTVT 124
Query: 220 FKVVIQLALDLARGLSYLQSK--------KIVHRDVKTENMLLDKTRTVKIADFGVA--R 269
+ +I+LAL A GL++L + I HRD+K++N+L+ K T IAD G+A
Sbjct: 125 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 184
Query: 270 LEASNPHDMT--GETGTLGYMAPEVLNGSAYN------RKCDVYSFGICLWEIY--CC-- 317
A++ D+ GT YMAPEVL+ S ++ D+Y+ G+ WEI C
Sbjct: 185 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 244
Query: 318 ------DMPYPDL-----SFSEVTSAVVRQNLRPEIP---RCCPS--SLANVMKRCWDAN 361
+PY DL S E+ V Q LRP IP + C + +A +M+ CW AN
Sbjct: 245 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 304
Query: 362 PDKRPEMDEVVAMLEAIDTSKG 383
R + L + +G
Sbjct: 305 GAARLTALRIKKTLSQLSQQEG 326
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 135/270 (50%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 79
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 80 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 121
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 240
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M++CW + D RP+ E++
Sbjct: 241 PPICTIDVYMIMRKCWMIDADSRPKFRELI 270
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 135/270 (50%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 82
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 83 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 124
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 243
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M++CW + D RP+ E++
Sbjct: 244 PPICTIDVYMIMRKCWMIDADSRPKFRELI 273
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 135/270 (50%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 89
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 90 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 131
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 132 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 191
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 192 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 250
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M++CW + D RP+ E++
Sbjct: 251 PPICTIDVYMIMRKCWMIDADSRPKFRELI 280
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 130/284 (45%), Gaps = 31/284 (10%)
Query: 92 QEWEIDPAKLIIK-GAFARGTFGTVHRGIYDGQD--VAVKLLDWGEESHRSEAEIASLRA 148
Q + DP +L K +G+FG V +GI + VA+K++D E
Sbjct: 14 QNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL--------EEAEDEIE 65
Query: 149 AFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKS 208
QE+ V + D P VTK+ G+ + ++L +++EY GG+
Sbjct: 66 DIQQEITVLSQCDSPYVTKYYGSYLKDTKL----------------WIIMEYLGGGSALD 109
Query: 209 YLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA 268
L + +++ ++ +GL YL S+K +HRD+K N+LL + VK+ADFGVA
Sbjct: 110 LLEPGPLDETQIATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 166
Query: 269 RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 328
GT +MAPEV+ SAY+ K D++S GI E+ + P+ +L +
Sbjct: 167 GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK 226
Query: 329 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
V + + N P + L ++ C + P RP E++
Sbjct: 227 VLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 269
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 135/295 (45%), Gaps = 46/295 (15%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
G FG V YD G+ VAVK L + IA L+ +E+ + L
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSL----KPESGGNHIADLK----KEIEILRNL 80
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G I T++G G+ +++E+ G+LK YL KN+ K+
Sbjct: 81 YHENIVKYKG---------ICTEDGGNGIK-----LIMEFLPSGSLKEYLPKNKN-KINL 125
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K ++ A+ + +G+ YL S++ VHRD+ N+L++ VKI DFG+ + ++ T
Sbjct: 126 KQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTV 185
Query: 280 --GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSE------- 328
+ + APE L S + DV+SFG+ L E+ YC P F +
Sbjct: 186 KDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHG 245
Query: 329 ---VTSAV--VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
VT V +++ R P CP + +M++CW+ P R ++ EA+
Sbjct: 246 QMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 132/284 (46%), Gaps = 31/284 (10%)
Query: 92 QEWEIDPAKLIIK-GAFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRA 148
Q +DP +L K +G+FG V++GI + + VA+K++D E
Sbjct: 11 QHSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDL--------EEAEDEIE 62
Query: 149 AFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKS 208
QE+ V + D P +T++ G+ + +++L +++EY GG+
Sbjct: 63 DIQQEITVLSQCDSPYITRYFGSYLKSTKL----------------WIIMEYLGGGSALD 106
Query: 209 YLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA 268
L + +++ ++ +GL YL S++ +HRD+K N+LL + VK+ADFGVA
Sbjct: 107 LLKPGPLEETYIATILR---EILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVA 163
Query: 269 RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 328
GT +MAPEV+ SAY+ K D++S GI E+ + P DL
Sbjct: 164 GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR 223
Query: 329 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
V ++ +N P + ++ C + +P RP E++
Sbjct: 224 VL-FLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELL 266
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 135/295 (45%), Gaps = 46/295 (15%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
G FG V YD G+ VAVK L + IA L+ +E+ + L
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSL----KPESGGNHIADLK----KEIEILRNL 68
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H N+ K+ G I T++G G+ +++E+ G+LK YL KN+ K+
Sbjct: 69 YHENIVKYKG---------ICTEDGGNGIK-----LIMEFLPSGSLKEYLPKNKN-KINL 113
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT- 279
K ++ A+ + +G+ YL S++ VHRD+ N+L++ VKI DFG+ + ++ T
Sbjct: 114 KQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTV 173
Query: 280 --GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSE------- 328
+ + APE L S + DV+SFG+ L E+ YC P F +
Sbjct: 174 KDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHG 233
Query: 329 ---VTSAV--VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
VT V +++ R P CP + +M++CW+ P R ++ EA+
Sbjct: 234 QMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 288
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 31/280 (11%)
Query: 96 IDPAKLIIK-GAFARGTFGTVHRGIYDGQD--VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+DP +L K +G+FG V +GI + VA+K++D E Q
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL--------EEAEDEIEDIQQ 54
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E+ V + D P VTK+ G+ + ++L +++EY GG+ L
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKL----------------WIIMEYLGGGSALDLLEP 98
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ +++ ++ +GL YL S+K +HRD+K N+LL + VK+ADFGVA
Sbjct: 99 GPLDETQIATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 155
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
GT +MAPEV+ SAY+ K D++S GI E+ + P+ +L +V
Sbjct: 156 DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL 215
Query: 333 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+ + N P + L ++ C + P RP E++
Sbjct: 216 IPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 31/280 (11%)
Query: 96 IDPAKLIIK-GAFARGTFGTVHRGIYDGQD--VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+DP +L K +G+FG V +GI + VA+K++D E Q
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL--------EEAEDEIEDIQQ 54
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E+ V + D P VTK+ G+ + ++L +++EY GG+ L
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKL----------------WIIMEYLGGGSALDLLEP 98
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ +++ ++ +GL YL S+K +HRD+K N+LL + VK+ADFGVA
Sbjct: 99 GPLDETQIATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 155
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
GT +MAPEV+ SAY+ K D++S GI E+ + P+ +L +V
Sbjct: 156 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL 215
Query: 333 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+ + N P + L ++ C + P RP E++
Sbjct: 216 IPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 135/271 (49%), Gaps = 26/271 (9%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
+ G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 86
Query: 166 TKFIGATM-GTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ +G + T +L +Q MP F C++ +Y ++ + + + ++
Sbjct: 87 CRLLGICLTSTVQLIMQL------MP--FGCLL-DY----------VREHKDNIGSQYLL 127
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 128 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 285 --LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPE 341
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 247
Query: 342 IPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 248 -PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 31/280 (11%)
Query: 96 IDPAKLIIK-GAFARGTFGTVHRGIYDGQD--VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
+DP +L K +G+FG V +GI + VA+K++D E Q
Sbjct: 23 MDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL--------EEAEDEIEDIQQ 74
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E+ V + D P VTK+ G+ + ++L +++EY GG+ L
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKL----------------WIIMEYLGGGSALDLLEP 118
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
+ +++ ++ +GL YL S+K +HRD+K N+LL + VK+ADFGVA
Sbjct: 119 GPLDETQIATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 175
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
GT +MAPEV+ SAY+ K D++S GI E+ + P+ +L +V
Sbjct: 176 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL 235
Query: 333 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+ + N P + L ++ C + P RP E++
Sbjct: 236 IPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 274
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 82
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 83 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 124
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 243
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 244 PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 134/271 (49%), Gaps = 26/271 (9%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 81
Query: 166 TKFIGATM-GTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ +G + T +L +Q MP F C++ +Y ++ + + + ++
Sbjct: 82 CRLLGICLTSTVQLIMQL------MP--FGCLL-DY----------VREHKDNIGSQYLL 122
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG A+L + + E G
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 285 --LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPE 341
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 242
Query: 342 IPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M++CW + D RP+ E++
Sbjct: 243 -PPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 135/270 (50%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
+ G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 86
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 87 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 128
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 247
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 248 PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 134/271 (49%), Gaps = 26/271 (9%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 83
Query: 166 TKFIGATM-GTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ +G + T +L +Q MP F C++ +Y ++ + + + ++
Sbjct: 84 CRLLGICLTSTVQLIMQL------MP--FGCLL-DY----------VREHKDNIGSQYLL 124
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 125 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 285 --LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPE 341
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 244
Query: 342 IPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 245 -PPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 135/270 (50%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
+ G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 79
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 80 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 121
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 240
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 134/271 (49%), Gaps = 26/271 (9%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 81
Query: 166 TKFIGATM-GTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ +G + T +L +Q MP F C++ +Y ++ + + + ++
Sbjct: 82 CRLLGICLTSTVQLIMQL------MP--FGCLL-DY----------VREHKDNIGSQYLL 122
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 285 --LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPE 341
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 242
Query: 342 IPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 243 -PPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 82
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 83 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 124
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 243
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 244 PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 134/271 (49%), Gaps = 26/271 (9%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 82
Query: 166 TKFIGATM-GTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ +G + T +L +Q MP F C++ +Y ++ + + + ++
Sbjct: 83 CRLLGICLTSTVQLIMQL------MP--FGCLL-DY----------VREHKDNIGSQYLL 123
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 124 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 285 --LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPE 341
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 243
Query: 342 IPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 244 -PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 86
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 87 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 128
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 247
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 248 PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 81
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 82 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 123
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 242
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 243 PPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 85
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 86 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 127
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 128 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 187
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 188 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 246
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 247 PPICTIDVYMIMVKCWMIDADSRPKFRELI 276
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 81
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 82 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 123
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG A+L + + E G
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 242
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M++CW + D RP+ E++
Sbjct: 243 PPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 134/271 (49%), Gaps = 26/271 (9%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 80
Query: 166 TKFIGATM-GTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ +G + T +L +Q MP F C++ +Y ++ + + + ++
Sbjct: 81 CRLLGICLTSTVQLIMQL------MP--FGCLL-DY----------VREHKDNIGSQYLL 121
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 122 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 285 --LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPE 341
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 241
Query: 342 IPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 242 -PPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 134/271 (49%), Gaps = 26/271 (9%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 79
Query: 166 TKFIGATM-GTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ +G + T +L +Q MP F C++ +Y ++ + + + ++
Sbjct: 80 CRLLGICLTSTVQLIMQL------MP--FGCLL-DY----------VREHKDNIGSQYLL 120
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 285 --LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPE 341
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240
Query: 342 IPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 241 -PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 141/309 (45%), Gaps = 54/309 (17%)
Query: 96 IDPAKLIIKGAFARGTFGTVHRGIYDGQD---VAVKLLDWGEESHRSEAEIASLRAAFTQ 152
I+ + I +GAF R F G+ + VAVK+L E A ++A F +
Sbjct: 49 IEYVRDIGEGAFGR-VFQARAPGLLPYEPFTMVAVKML--------KEEASADMQADFQR 99
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL-- 210
E A+ + D+PN+ K +G +G P C++ EY G L +L
Sbjct: 100 EAALMAEFDNPNIVKLLGVCA-------------VGKPM---CLLFEYMAYGDLNEFLRS 143
Query: 211 -------------IKNRRR-------KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTE 250
+ R R L+ + +A +A G++YL +K VHRD+ T
Sbjct: 144 MSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATR 203
Query: 251 NMLLDKTRTVKIADFGVAR-LEASNPHDMTGETGT-LGYMAPEVLNGSAYNRKCDVYSFG 308
N L+ + VKIADFG++R + +++ + G + +M PE + + Y + DV+++G
Sbjct: 204 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYG 263
Query: 309 ICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 367
+ LWEI+ + PY ++ EV V N+ P CP L N+M+ CW P RP
Sbjct: 264 VVLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL-ACPENCPLELYNLMRLCWSKLPADRPS 322
Query: 368 MDEVVAMLE 376
+ +L+
Sbjct: 323 FCSIHRILQ 331
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 79
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 80 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 121
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 240
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 130/270 (48%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 80
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + ++ ++++ G L Y ++ + + + ++
Sbjct: 81 CRLLGICLTST-----------------VQLIMQLMPFGXLLDY-VREHKDNIGSQYLLN 122
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 183 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 241
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 242 PPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 104
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 105 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 146
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 147 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 206
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 207 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 265
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 266 PPICTIDVYMIMVKCWMIDADSRPKFRELI 295
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 73
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 74 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 115
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 116 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 234
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 235 PPICTIDVYMIMVKCWMIDADSRPKFRELI 264
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 131/270 (48%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 79
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP G L Y ++ + + + ++
Sbjct: 80 CRLLGICL-TSTVQLITQL----MPF------------GXLLDY-VREHKDNIGSQYLLN 121
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 240
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 113/242 (46%), Gaps = 34/242 (14%)
Query: 150 FTQEVAVWHKL-DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKS 208
F E+ V KL HPN+ +GA H G + + +EY G L
Sbjct: 62 FAGELEVLCKLGHHPNIINLLGAC------------EHRG----YLYLAIEYAPHGNLLD 105
Query: 209 YLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLL 254
+L K+R L+ + ++ A D+ARG+ YL K+ +HRD+ N+L+
Sbjct: 106 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV 165
Query: 255 DKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI 314
+ KIADFG++R + G + +MA E LN S Y DV+S+G+ LWEI
Sbjct: 166 GENYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 224
Query: 315 YCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PY ++ +E+ + Q R E P C + ++M++CW P +RP +++
Sbjct: 225 VSLGGTPYCGMTCAELYEK-LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 283
Query: 374 ML 375
L
Sbjct: 284 SL 285
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 113/242 (46%), Gaps = 34/242 (14%)
Query: 150 FTQEVAVWHKL-DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKS 208
F E+ V KL HPN+ +GA H G + + +EY G L
Sbjct: 72 FAGELEVLCKLGHHPNIINLLGAC------------EHRG----YLYLAIEYAPHGNLLD 115
Query: 209 YLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLL 254
+L K+R L+ + ++ A D+ARG+ YL K+ +HRD+ N+L+
Sbjct: 116 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV 175
Query: 255 DKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI 314
+ KIADFG++R + G + +MA E LN S Y DV+S+G+ LWEI
Sbjct: 176 GENYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 234
Query: 315 YCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PY ++ +E+ + Q R E P C + ++M++CW P +RP +++
Sbjct: 235 VSLGGTPYCGMTCAELYEK-LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 293
Query: 374 ML 375
L
Sbjct: 294 SL 295
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 135/316 (42%), Gaps = 58/316 (18%)
Query: 93 EWEIDPAKLIIKGAFARGTFGTVHRGIYDGQD-------VAVKLLDWGEESHRSEAEIAS 145
+WE L G FG V G VAVK+L E++ SE
Sbjct: 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK--EKADSSE----- 91
Query: 146 LRAAFTQEVAVWHKL-DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
R A E+ + +L H N+ +GA T +G I + + EYC G
Sbjct: 92 -REALMSELKMMTQLGSHENIVNLLGAC---------TLSGPIYL-------IFEYCCYG 134
Query: 205 ALKSYLIKNRRRK----------------------LAFKVVIQLALDLARGLSYLQSKKI 242
L +YL +++R K L F+ ++ A +A+G+ +L+ K
Sbjct: 135 DLLNYL-RSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 193
Query: 243 VHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL--GYMAPEVLNGSAYNR 300
VHRD+ N+L+ + VKI DFG+AR S+ + + L +MAPE L Y
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI 253
Query: 301 KCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWD 359
K DV+S+GI LWEI+ + PYP + +++ + + P + +M+ CW
Sbjct: 254 KSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWA 313
Query: 360 ANPDKRPEMDEVVAML 375
+ KRP + + L
Sbjct: 314 FDSRKRPSFPNLTSFL 329
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 131/302 (43%), Gaps = 50/302 (16%)
Query: 101 LIIKGAFARGTFGTVHRG-------IYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQE 153
+++K G FG V D VAVK L + +A+ R F +E
Sbjct: 17 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL--------KDPTLAA-RKDFQRE 67
Query: 154 VAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL--- 210
+ L H ++ KF G L +V EY G L +L
Sbjct: 68 AELLTNLQHEHIVKFYGVCGDGDPL----------------IMVFEYMKHGDLNKFLRAH 111
Query: 211 -----------IKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT 259
+ + +L ++ +A +A G+ YL S+ VHRD+ T N L+
Sbjct: 112 GPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL 171
Query: 260 VKIADFGVAR-LEASNPHDMTGETGT-LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
VKI DFG++R + +++ + + G T + +M PE + + + DV+SFG+ LWEI+
Sbjct: 172 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTY 231
Query: 318 -DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
P+ LS +EV + Q E PR CP + +VM CW P +R + E+ +L
Sbjct: 232 GKQPWFQLSNTEVIECIT-QGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILH 290
Query: 377 AI 378
A+
Sbjct: 291 AL 292
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 133/270 (49%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 76
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 77 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 118
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 119 WCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 178
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 179 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 237
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 238 PPICTIDVYMIMVKCWMIDADSRPKFRELI 267
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 49/290 (16%)
Query: 112 FGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
FG V++G G Q VA+K L + +AE LR F E + +L HPN
Sbjct: 39 FGKVYKGHLFGPAPGEQTQAVAIKTL-------KDKAE-GPLREEFRHEAMLRARLQHPN 90
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI------------K 212
V +G L++ + YC G L +L+
Sbjct: 91 VVCLLGVVTKDQPLSM----------------IFSYCSHGDLHEFLVMRSPHSDVGSTDD 134
Query: 213 NRRRKLAFKV--VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR- 269
+R K A + + L +A G+ YL S +VH+D+ T N+L+ VKI+D G+ R
Sbjct: 135 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 270 LEASNPHDMTGETGT-LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFS 327
+ A++ + + G + + +MAPE + ++ D++S+G+ LWE++ + PY S
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 254
Query: 328 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEA 377
+V + + + P P CP+ + +M CW+ P +RP ++ + L A
Sbjct: 255 DVVEMIRNRQVLP-CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 49/290 (16%)
Query: 112 FGTVHRGIYDG-------QDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
FG V++G G Q VA+K L + +AE LR F E + +L HPN
Sbjct: 22 FGKVYKGHLFGPAPGEQTQAVAIKTL-------KDKAE-GPLREEFRHEAMLRARLQHPN 73
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI------------K 212
V +G L++ + YC G L +L+
Sbjct: 74 VVCLLGVVTKDQPLSM----------------IFSYCSHGDLHEFLVMRSPHSDVGSTDD 117
Query: 213 NRRRKLAFKV--VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR- 269
+R K A + + L +A G+ YL S +VH+D+ T N+L+ VKI+D G+ R
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 270 LEASNPHDMTGETGT-LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFS 327
+ A++ + + G + + +MAPE + ++ D++S+G+ LWE++ + PY S
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 237
Query: 328 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEA 377
+V + + + P P CP+ + +M CW+ P +RP ++ + L A
Sbjct: 238 DVVEMIRNRQVLP-CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 286
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 138/302 (45%), Gaps = 49/302 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDW-GEESHRSEAEIASLRAAFTQEVAVWHK 159
+G FG+V YD G VAVK L G + R F +E+ +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD----------FQREIQILKA 68
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA 219
L + K+ G + G +++ +V+EY G L+ +L ++R R A
Sbjct: 69 LHSDFIVKYRGVSYGPGRQSLR--------------LVMEYLPSGCLRDFLQRHRARLDA 114
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASNPHDM 278
++++ + + +G+ YL S++ VHRD+ N+L++ VKIADFG+A+ L + +
Sbjct: 115 SRLLL-YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 173
Query: 279 TGETGT--LGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEV----- 329
E G + + APE L+ + ++R+ DV+SFG+ L+E+ YC P F +
Sbjct: 174 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCER 233
Query: 330 -TSAVVRQNL------RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSK 382
A+ R R P CP+ + +MK CW +P RP + L+ + +
Sbjct: 234 DVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 293
Query: 383 GG 384
G
Sbjct: 294 RG 295
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 130/289 (44%), Gaps = 31/289 (10%)
Query: 97 DPAKLIIK-GAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQE 153
DP +L K +G+FG V +GI + Q VA+K++D E E QE
Sbjct: 20 DPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDI--------QQE 71
Query: 154 VAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN 213
+ V + D VTK+ G+ + S+L +++EY GG+ L
Sbjct: 72 ITVLSQCDSSYVTKYYGSYLKGSKL----------------WIIMEYLGGGSALDLLRAG 115
Query: 214 RRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEAS 273
+ +++ ++ +GL YL S+K +HRD+K N+LL + VK+ADFGVA
Sbjct: 116 PFDEFQIATMLK---EILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 172
Query: 274 NPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 333
GT +MAPEV+ SAY+ K D++S GI E+ + P D+ V +
Sbjct: 173 TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI 232
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSK 382
+ N P + S + C + +P RP E++ + SK
Sbjct: 233 PKNN-PPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSK 280
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 26/271 (9%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 81
Query: 166 TKFIGATM-GTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ +G + T +L +Q MP F C++ +Y ++ + + + ++
Sbjct: 82 CRLLGICLTSTVQLIMQL------MP--FGCLL-DY----------VREHKDNIGSQYLL 122
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG A+L + + E G
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 285 --LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPE 341
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 242
Query: 342 IPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 243 -PPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 138/302 (45%), Gaps = 49/302 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDW-GEESHRSEAEIASLRAAFTQEVAVWHK 159
+G FG+V YD G VAVK L G + R F +E+ +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD----------FQREIQILKA 67
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA 219
L + K+ G + G +++ +V+EY G L+ +L ++R R A
Sbjct: 68 LHSDFIVKYRGVSYGPGRQSLR--------------LVMEYLPSGCLRDFLQRHRARLDA 113
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASNPHDM 278
++++ + + +G+ YL S++ VHRD+ N+L++ VKIADFG+A+ L + +
Sbjct: 114 SRLLL-YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 172
Query: 279 TGETGT--LGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEV----- 329
E G + + APE L+ + ++R+ DV+SFG+ L+E+ YC P F +
Sbjct: 173 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSER 232
Query: 330 -TSAVVRQNL------RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSK 382
A+ R R P CP+ + +MK CW +P RP + L+ + +
Sbjct: 233 DVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 292
Query: 383 GG 384
G
Sbjct: 293 RG 294
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 134/272 (49%), Gaps = 28/272 (10%)
Query: 106 AFARGTFGTVHRGIY--DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G FGTV++G++ +G+ V + + EA E V +D+P
Sbjct: 56 VLGSGAFGTVYKGLWIPEGEKVKIPV----AIMELREATSPKANKEILDEAYVMASVDNP 111
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
+V + +G + TS + + T MP F C++ +Y ++ + + + +
Sbjct: 112 HVCRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYL 153
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG 283
+ + +A+G++YL+ +++VHRD+ N+L+ + VKI DFG+A+L + + E G
Sbjct: 154 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 284 T--LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRP 340
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P
Sbjct: 214 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 273
Query: 341 EIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+ P C + +M +CW + D RP+ E++
Sbjct: 274 Q-PPICTIDVYMIMVKCWMIDADSRPKFRELI 304
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 138/302 (45%), Gaps = 49/302 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDW-GEESHRSEAEIASLRAAFTQEVAVWHK 159
+G FG+V YD G VAVK L G + R F +E+ +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD----------FQREIQILKA 80
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA 219
L + K+ G + G +++ +V+EY G L+ +L ++R R A
Sbjct: 81 LHSDFIVKYRGVSYGPGRQSLR--------------LVMEYLPSGCLRDFLQRHRARLDA 126
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASNPHDM 278
++++ + + +G+ YL S++ VHRD+ N+L++ VKIADFG+A+ L + +
Sbjct: 127 SRLLL-YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 185
Query: 279 TGETGT--LGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEV----- 329
E G + + APE L+ + ++R+ DV+SFG+ L+E+ YC P F +
Sbjct: 186 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCER 245
Query: 330 -TSAVVRQNL------RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSK 382
A+ R R P CP+ + +MK CW +P RP + L+ + +
Sbjct: 246 DVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305
Query: 383 GG 384
G
Sbjct: 306 RG 307
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 133/270 (49%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 86
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 87 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 128
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG A+L + + E G
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 188
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 247
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 248 PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 133/270 (49%), Gaps = 24/270 (8%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 79
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
+ +G + TS + + T MP F C++ +Y ++ + + + ++
Sbjct: 80 CRLLGICL-TSTVQLITQL----MP--FGCLL-DY----------VREHKDNIGSQYLLN 121
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT- 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG A+L + + E G
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 181
Query: 285 -LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 342
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ- 240
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 26/271 (9%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
G FGTV++G++ + VK+ +E EA E V +D+P+V
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHV 83
Query: 166 TKFIGATM-GTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ +G + T +L +Q MP F C++ +Y ++ + + + ++
Sbjct: 84 CRLLGICLTSTVQLIMQL------MP--FGCLL-DY----------VREHKDNIGSQYLL 124
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ +A+G++YL+ +++VHRD+ N+L+ + VKI DFG A+L + + E G
Sbjct: 125 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 285 --LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPE 341
+ +MA E + Y + DV+S+G+ +WE+ PY + SE++S + + P+
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 244
Query: 342 IPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P C + +M +CW + D RP+ E++
Sbjct: 245 -PPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 48/294 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
G FG V YD G+ VAVK L E LR+ + +E+ + L
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--------KEGCGPQLRSGWQREIEILRTL 67
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H ++ K+ G E ++Q +V+EY G+L+ YL R +
Sbjct: 68 YHEHIVKYKGCCEDQGEKSVQ--------------LVMEYVPLGSLRDYL---PRHCVGL 110
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASNPHDMT 279
++ A + G++YL ++ +HR + N+LLD R VKI DFG+A+ + + +
Sbjct: 111 AQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 170
Query: 280 GETG--TLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVT----- 330
E G + + APE L + DV+SFG+ L+E+ YC P F+E+
Sbjct: 171 REDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQG 230
Query: 331 -------SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEA 377
+ ++ + R P CP + ++MK CW+ RP +V +L+
Sbjct: 231 QMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 284
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 129/282 (45%), Gaps = 34/282 (12%)
Query: 99 AKLIIKGAFARGTFGTVHRG--IYDGQDVAVK---LLDWGEESHRSEAEIASLRAAFTQE 153
A I+ RG F V+R + DG VA+K + D + A RA +E
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD---------AKARADCIKE 82
Query: 154 VAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL--I 211
+ + +L+HPNV K+ + + +ELNI V+E G L +
Sbjct: 83 IDLLKQLNHPNVIKYYASFIEDNELNI----------------VLELADAGDLSRMIKHF 126
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
K ++R + + V + + L L ++ S++++HRD+K N+ + T VK+ D G+ R
Sbjct: 127 KKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186
Query: 272 ASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY--PDLSFSEV 329
+S GT YM+PE ++ + YN K D++S G L+E+ P+ ++ +
Sbjct: 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL 246
Query: 330 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 371
+ + + P L ++ C + +P+KRP++ V
Sbjct: 247 CKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 48/294 (16%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
G FG V YD G+ VAVK L E LR+ + +E+ + L
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--------KEGCGPQLRSGWQREIEILRTL 68
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
H ++ K+ G E ++Q +V+EY G+L+ YL R +
Sbjct: 69 YHEHIVKYKGCCEDQGEKSVQ--------------LVMEYVPLGSLRDYL---PRHCVGL 111
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASNPHDMT 279
++ A + G++YL ++ +HR + N+LLD R VKI DFG+A+ + + +
Sbjct: 112 AQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 171
Query: 280 GETG--TLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVT----- 330
E G + + APE L + DV+SFG+ L+E+ YC P F+E+
Sbjct: 172 REDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQG 231
Query: 331 -------SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEA 377
+ ++ + R P CP + ++MK CW+ RP +V +L+
Sbjct: 232 QMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 285
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 134/297 (45%), Gaps = 51/297 (17%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLLDW-GEESHRSEAEIASLRAAFTQEVAVWHK 159
+G FG+V YD G VAVK L G + R F +E+ +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD----------FQREIQILKA 64
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA 219
L + K+ G + G ++ +V+EY G L+ +L ++R R A
Sbjct: 65 LHSDFIVKYRGVSYGPGRPELR--------------LVMEYLPSGCLRDFLQRHRARLDA 110
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT 279
++++ + + +G+ YL S++ VHRD+ N+L++ VKIADFG+A+L +
Sbjct: 111 SRLLL-YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV 169
Query: 280 ----GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEV---- 329
G++ Y APE L+ + ++R+ DV+SFG+ L+E+ YC P F +
Sbjct: 170 VREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE 228
Query: 330 --TSAVVRQNL------RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
A+ R R P CP+ + +MK CW +P RP + L+ +
Sbjct: 229 RDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 285
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 132/297 (44%), Gaps = 52/297 (17%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLL--DWGEESHRSEAEIASLRAAFTQEVAVWH 158
G FG V YD G+ VAVK L D G + R+ + QE+ +
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH----------RSGWKQEIDILR 71
Query: 159 KLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKL 218
L H ++ K+ G E ++Q +V+EY G+L+ YL R +
Sbjct: 72 TLYHEHIIKYKGCCEDQGEKSLQ--------------LVMEYVPLGSLRDYL---PRHSI 114
Query: 219 AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASNPHD 277
++ A + G++YL S+ +HR++ N+LLD R VKI DFG+A+ + + +
Sbjct: 115 GLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 278 MTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVT--- 330
E G + + APE L + DV+SFG+ L+E+ +C P F E+
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 234
Query: 331 ---------SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ ++ + R P CP + ++MK CW+ RP + ++ +L+ +
Sbjct: 235 QGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 113/242 (46%), Gaps = 34/242 (14%)
Query: 150 FTQEVAVWHKL-DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKS 208
F E+ V KL HPN+ +GA H G + + +EY G L
Sbjct: 69 FAGELEVLCKLGHHPNIINLLGAC------------EHRG----YLYLAIEYAPHGNLLD 112
Query: 209 YLIKNR--------------RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLL 254
+L K+R L+ + ++ A D+ARG+ YL K+ +HR++ N+L+
Sbjct: 113 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILV 172
Query: 255 DKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI 314
+ KIADFG++R + G + +MA E LN S Y DV+S+G+ LWEI
Sbjct: 173 GENYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 231
Query: 315 YCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
PY ++ +E+ + Q R E P C + ++M++CW P +RP +++
Sbjct: 232 VSLGGTPYCGMTCAELYEK-LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 290
Query: 374 ML 375
L
Sbjct: 291 SL 292
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 136/291 (46%), Gaps = 40/291 (13%)
Query: 100 KLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
+LI G F + F HR DG+ ++ + + E ++E E+ +L K
Sbjct: 18 ELIGSGGFGQ-VFKAKHR--IDGKTYVIRRVKYNNE--KAEREVKAL-----------AK 61
Query: 160 LDHPNVTKFIGATMG------TSELNIQT-----DNGHIGMPSNFCCVVV--EYCHGGAL 206
LDH N+ + G G TS+ ++++ +N S C+ + E+C G L
Sbjct: 62 LDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL 121
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+ ++ K R KL + ++L + +G+ Y+ SKK++HRD+K N+ L T+ VKI DFG
Sbjct: 122 EQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFG 181
Query: 267 VARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWE-IYCCDMPYPDLS 325
+ N T GTL YM+PE ++ Y ++ D+Y+ G+ L E ++ CD +
Sbjct: 182 LV-TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK 240
Query: 326 -FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAML 375
F+++ + I ++++ P+ RP E++ L
Sbjct: 241 FFTDLRDGI--------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 283
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 141/310 (45%), Gaps = 46/310 (14%)
Query: 106 AFARGTFGTVHRGIY--DGQD----VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
G FGTVH+G++ +G+ V +K+++ ++S R + A T +
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIE--DKSGRQSFQ------AVTDHMLAIGS 89
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA 219
LDH ++ + +G G+S +V +Y G+L + ++ R L
Sbjct: 90 LDHAHIVRLLGLCPGSS-----------------LQLVTQYLPLGSLLDH-VRQHRGALG 131
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA-RLEASNPHDM 278
++++ + +A+G+ YL+ +VHR++ N+LL V++ADFGVA L + +
Sbjct: 132 PQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 191
Query: 279 TGETGT-LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQ 336
E T + +MA E ++ Y + DV+S+G+ +WE+ PY L +EV ++ +
Sbjct: 192 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD-LLEK 250
Query: 337 NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE----------AIDTSKGGGM 386
R P+ C + VM +CW + + RP E+ I G G+
Sbjct: 251 GERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGI 310
Query: 387 IPVDQPQGCS 396
P +P G +
Sbjct: 311 APGPEPHGLT 320
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 141/310 (45%), Gaps = 46/310 (14%)
Query: 106 AFARGTFGTVHRGIY--DGQD----VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
G FGTVH+G++ +G+ V +K+++ ++S R + A T +
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIE--DKSGRQSFQ------AVTDHMLAIGS 71
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA 219
LDH ++ + +G G+S +V +Y G+L + ++ R L
Sbjct: 72 LDHAHIVRLLGLCPGSS-----------------LQLVTQYLPLGSLLDH-VRQHRGALG 113
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA-RLEASNPHDM 278
++++ + +A+G+ YL+ +VHR++ N+LL V++ADFGVA L + +
Sbjct: 114 PQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 173
Query: 279 TGETGT-LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQ 336
E T + +MA E ++ Y + DV+S+G+ +WE+ PY L +EV ++ +
Sbjct: 174 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD-LLEK 232
Query: 337 NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE----------AIDTSKGGGM 386
R P+ C + VM +CW + + RP E+ I G G+
Sbjct: 233 GERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGI 292
Query: 387 IPVDQPQGCS 396
P +P G +
Sbjct: 293 APGPEPHGLT 302
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 132/305 (43%), Gaps = 56/305 (18%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLL--DWGEESHRSEAEIASLRAAFTQEVAVWH 158
G FG V YD G+ VAVK L D G + R+ + QE+ +
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQH----------RSGWKQEIDILR 88
Query: 159 KLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKL 218
L H ++ K+ G ++Q +V+EY G+L+ YL R +
Sbjct: 89 TLYHEHIIKYKGCCEDAGAASLQ--------------LVMEYVPLGSLRDYL---PRHSI 131
Query: 219 AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDM 278
++ A + G++YL ++ +HRD+ N+LLD R VKI DFG+A+ H+
Sbjct: 132 GLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK-AVPEGHEX 190
Query: 279 T-----GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVT- 330
G++ Y APE L + DV+SFG+ L+E+ +C P F E+
Sbjct: 191 YRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG 249
Query: 331 -----------SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAID 379
+ ++ + R P CP+ + ++MK CW+ RP + ++ +L+ +
Sbjct: 250 IAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309
Query: 380 TSKGG 384
G
Sbjct: 310 EKYQG 314
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 146/305 (47%), Gaps = 48/305 (15%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFT 151
QEW+I +L I +G FG V+ G + G +VA++L+D E + AF
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLID-------IERDNEDQLKAFK 77
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
+EV + + H NV F+GA M L ++ C G L S ++
Sbjct: 78 REVMAYRQTRHENVVLFMGACMSPPHL----------------AIITSLCKGRTLYS-VV 120
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV---- 267
++ + L Q+A ++ +G+ YL +K I+H+D+K++N+ D + V I DFG+
Sbjct: 121 RDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVV-ITDFGLFSIS 179
Query: 268 ARLEASNPHD-MTGETGTLGYMAPEVLNGSA---------YNRKCDVYSFGICLWEIYCC 317
L+A D + + G L ++APE++ + +++ DV++ G +E++
Sbjct: 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR 239
Query: 318 DMPYPDLSFSEVTSAVVRQ---NLRPEIPRC-CPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ P+ ++ A++ Q ++P + + +++++ CW ++RP +++
Sbjct: 240 EWPFK----TQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295
Query: 374 MLEAI 378
MLE +
Sbjct: 296 MLEKL 300
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 52/297 (17%)
Query: 107 FARGTFGTVHRGIYD------GQDVAVKLL--DWGEESHRSEAEIASLRAAFTQEVAVWH 158
G FG V YD G+ VAVK L D G + R+ + QE+ +
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH----------RSGWKQEIDILR 71
Query: 159 KLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKL 218
L H ++ K+ G E ++Q +V+EY G+L+ YL R +
Sbjct: 72 TLYHEHIIKYKGCCEDQGEKSLQ--------------LVMEYVPLGSLRDYL---PRHSI 114
Query: 219 AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR-LEASNPHD 277
++ A + G++YL ++ +HR++ N+LLD R VKI DFG+A+ + + +
Sbjct: 115 GLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 278 MTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVT--- 330
E G + + APE L + DV+SFG+ L+E+ +C P F E+
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 234
Query: 331 ---------SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
+ ++ + R P CP + ++MK CW+ RP + ++ +L+ +
Sbjct: 235 QGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 31/260 (11%)
Query: 121 DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNI 180
DG+ + K LD+G +EAE + EV + +L HPN+ ++ + + +
Sbjct: 30 DGKILVWKELDYGS---MTEAE----KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82
Query: 181 QTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK--NRRRKLAFKVVIQLALDLARGLSYLQ 238
+V+EYC GG L S + K R+ L + V+++ L L
Sbjct: 83 Y--------------IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 239 SKK-----IVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVL 293
+ ++HRD+K N+ LD + VK+ DFG+AR+ + GT YM+PE +
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM 188
Query: 294 NGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVRQNLRPEIPRCCPSSLAN 352
N +YN K D++S G L+E+ C MP P +FS+ A +R+ IP L
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL-CALMP-PFTAFSQKELAGKIREGKFRRIPYRYSDELNE 246
Query: 353 VMKRCWDANPDKRPEMDEVV 372
++ R + RP ++E++
Sbjct: 247 IITRMLNLKDYHRPSVEEIL 266
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 29/278 (10%)
Query: 101 LIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
LI G F + F HR DG+ +K + + E ++E E+ +L KL
Sbjct: 18 LIGSGGFGQ-VFKAKHR--IDGKTYVIKRVKYNNE--KAEREVKAL-----------AKL 61
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVV-VEYCHGGALKSYLIKNRRRKLA 219
DH N+ + G G + + +T + + C + +E+C G L+ ++ K R KL
Sbjct: 62 DHVNIVHYNGCWDGF-DYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 120
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT 279
+ ++L + +G+ Y+ SKK+++RD+K N+ L T+ VKI DFG+ N
Sbjct: 121 KVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKRX 179
Query: 280 GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWE-IYCCDMPYPDLS-FSEVTSAVVRQN 337
GTL YM+PE ++ Y ++ D+Y+ G+ L E ++ CD + F+++ +
Sbjct: 180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGI---- 235
Query: 338 LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAML 375
I ++++ P+ RP E++ L
Sbjct: 236 ----ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 101 LIIKGAFARGTFGTVH----RGIYDGQD---VAVKLLDWGEESHRSEAEIASLRAAFTQE 153
+++K G FG V + QD VAVK L ES R + F +E
Sbjct: 43 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD---------FQRE 93
Query: 154 VAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN 213
+ L H ++ +F G L +V EY G L +L +
Sbjct: 94 AELLTMLQHQHIVRFFGVCTEGRPL----------------LMVFEYMRHGDLNRFLRSH 137
Query: 214 -------------RRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
L ++ +A +A G+ YL VHRD+ T N L+ + V
Sbjct: 138 GPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVV 197
Query: 261 KIADFGVAR-LEASNPHDMTGETGT-LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC- 317
KI DFG++R + +++ + + G T + +M PE + + + DV+SFG+ LWEI+
Sbjct: 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYG 257
Query: 318 DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEA 377
P+ LS +E + Q E PR CP + +M+ CW P +R + +V A L+A
Sbjct: 258 KQPWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQA 316
Query: 378 I 378
+
Sbjct: 317 L 317
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 31/260 (11%)
Query: 121 DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNI 180
DG+ + K LD+G +EAE + EV + +L HPN+ ++ + + +
Sbjct: 30 DGKILVWKELDYGS---MTEAE----KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82
Query: 181 QTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK--NRRRKLAFKVVIQLALDLARGLSYLQ 238
+V+EYC GG L S + K R+ L + V+++ L L
Sbjct: 83 Y--------------IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 239 SKK-----IVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVL 293
+ ++HRD+K N+ LD + VK+ DFG+AR+ + GT YM+PE +
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM 188
Query: 294 NGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVRQNLRPEIPRCCPSSLAN 352
N +YN K D++S G L+E+ C MP P +FS+ A +R+ IP L
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL-CALMP-PFTAFSQKELAGKIREGKFRRIPYRYSDELNE 246
Query: 353 VMKRCWDANPDKRPEMDEVV 372
++ R + RP ++E++
Sbjct: 247 IITRMLNLKDYHRPSVEEIL 266
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 101 LIIKGAFARGTFGTVH----RGIYDGQD---VAVKLLDWGEESHRSEAEIASLRAAFTQE 153
+++K G FG V + QD VAVK L ES R + F +E
Sbjct: 20 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD---------FQRE 70
Query: 154 VAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN 213
+ L H ++ +F G L +V EY G L +L +
Sbjct: 71 AELLTMLQHQHIVRFFGVCTEGRPL----------------LMVFEYMRHGDLNRFLRSH 114
Query: 214 -------------RRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
L ++ +A +A G+ YL VHRD+ T N L+ + V
Sbjct: 115 GPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVV 174
Query: 261 KIADFGVAR-LEASNPHDMTGETGT-LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC- 317
KI DFG++R + +++ + + G T + +M PE + + + DV+SFG+ LWEI+
Sbjct: 175 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYG 234
Query: 318 DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEA 377
P+ LS +E + Q E PR CP + +M+ CW P +R + +V A L+A
Sbjct: 235 KQPWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQA 293
Query: 378 I 378
+
Sbjct: 294 L 294
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 33/261 (12%)
Query: 121 DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNI 180
DG+ + K LD+G +EAE + EV + +L HPN+ ++ + + +
Sbjct: 30 DGKILVWKELDYGS---MTEAE----KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82
Query: 181 QTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK--NRRRKLAFKVVIQLALDLARGLSYLQ 238
+V+EYC GG L S + K R+ L + V+++ L L
Sbjct: 83 Y--------------IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 239 SKK-----IVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE-TGTLGYMAPEV 292
+ ++HRD+K N+ LD + VK+ DFG+AR+ ++ D E GT YM+PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI-LNHDEDFAKEFVGTPYYMSPEQ 187
Query: 293 LNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVRQNLRPEIPRCCPSSLA 351
+N +YN K D++S G L+E+ C MP P +FS+ A +R+ IP L
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYEL-CALMP-PFTAFSQKELAGKIREGKFRRIPYRYSDELN 245
Query: 352 NVMKRCWDANPDKRPEMDEVV 372
++ R + RP ++E++
Sbjct: 246 EIITRMLNLKDYHRPSVEEIL 266
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 101 LIIKGAFARGTFGTVH----RGIYDGQD---VAVKLLDWGEESHRSEAEIASLRAAFTQE 153
+++K G FG V + QD VAVK L ES R + F +E
Sbjct: 14 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD---------FQRE 64
Query: 154 VAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN 213
+ L H ++ +F G L +V EY G L +L +
Sbjct: 65 AELLTMLQHQHIVRFFGVCTEGRPL----------------LMVFEYMRHGDLNRFLRSH 108
Query: 214 -------------RRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTV 260
L ++ +A +A G+ YL VHRD+ T N L+ + V
Sbjct: 109 GPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVV 168
Query: 261 KIADFGVAR-LEASNPHDMTGETGT-LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC- 317
KI DFG++R + +++ + + G T + +M PE + + + DV+SFG+ LWEI+
Sbjct: 169 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYG 228
Query: 318 DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEA 377
P+ LS +E + Q E PR CP + +M+ CW P +R + +V A L+A
Sbjct: 229 KQPWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQA 287
Query: 378 I 378
+
Sbjct: 288 L 288
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 124/274 (45%), Gaps = 37/274 (13%)
Query: 113 GTVHRGIYDGQDVAVKLL---DWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G + +G + G D+ VK+L DW R F +E HPNV +
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRD----------FNEECPRLRIFSHPNVLPVL 73
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALD 229
GA P+ ++ + G+L + L + + ++ ALD
Sbjct: 74 GACQSP--------------PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALD 119
Query: 230 LARGLSYLQSKK--IVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
+ARG+++L + + I + + ++++D+ T +I+ V + +P G +
Sbjct: 120 MARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADV-KFSFQSP----GRMYAPAW 174
Query: 288 MAPEVLNGSAYN---RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPR 344
+APE L + R D++SF + LWE+ ++P+ DLS E+ V + LRP IP
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPP 234
Query: 345 CCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
++ +MK C + +P KRP+ D +V +LE +
Sbjct: 235 GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 36/281 (12%)
Query: 101 LIIKGAFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWH 158
I K G FG VH G + +K ++ RS+ + + A E+ V
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTIN----KDRSQVPMEQIEA----EIEVLK 75
Query: 159 KLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI--KNRRR 216
LDHPN+ K E+ N +I V+E C GG L ++ + R +
Sbjct: 76 SLDHPNIIKIF-------EVFEDYHNMYI---------VMETCEGGELLERIVSAQARGK 119
Query: 217 KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKT---RTVKIADFGVARLEAS 273
L+ V +L + L+Y S+ +VH+D+K EN+L T +KI DFG+A L S
Sbjct: 120 ALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179
Query: 274 NPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 333
+ H T GT YMAPEV KCD++S G+ ++ + +P+ S EV
Sbjct: 180 DEHS-TNAAGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKA 237
Query: 334 VRQ--NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+ N E P ++ +++K+ +P++RP +V+
Sbjct: 238 TYKEPNYAVECRPLTPQAV-DLLKQMLTKDPERRPSAAQVL 277
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 44/273 (16%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
+GT+G V+ G V + + + E R +E+A+ L H N+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR-------YSQPLHEEIALHKHLKHKNI 81
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL------IKNRRRKLA 219
+++G+ ++NG F + +E GG+L + L +K+ + +
Sbjct: 82 VQYLGSF---------SENG-------FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG 125
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVA-RLEASNPHD 277
F + GL YL +IVHRD+K +N+L++ + +KI+DFG + RL NP
Sbjct: 126 F-----YTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 180
Query: 278 MTGETGTLGYMAPEVLNGS--AYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVR 335
T TGTL YMAPE+++ Y + D++S G + E+ P+ +L E +A+ +
Sbjct: 181 ETF-TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL--GEPQAAMFK 237
Query: 336 QNL---RPEIPRCCPSSLANVMKRCWDANPDKR 365
+ PEIP + + +C++ +PDKR
Sbjct: 238 VGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 44/273 (16%)
Query: 106 AFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
+GT+G V+ G V + + + E R + +E+A+ L H N+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH-------EEIALHKHLKHKNI 67
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL------IKNRRRKLA 219
+++G+ ++NG F + +E GG+L + L +K+ + +
Sbjct: 68 VQYLGSF---------SENG-------FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG 111
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVA-RLEASNPHD 277
F + GL YL +IVHRD+K +N+L++ + +KI+DFG + RL NP
Sbjct: 112 F-----YTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 166
Query: 278 MTGETGTLGYMAPEVLNGS--AYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVR 335
T TGTL YMAPE+++ Y + D++S G + E+ P+ +L E +A+ +
Sbjct: 167 ETF-TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL--GEPQAAMFK 223
Query: 336 QNL---RPEIPRCCPSSLANVMKRCWDANPDKR 365
+ PEIP + + +C++ +PDKR
Sbjct: 224 VGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 218 LAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD 277
L + +I + +A+G+ +L S+K +HRD+ N+LL + VKI DFG+AR +P
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 278 MTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 334
+ L +MAPE + Y + DV+SFG+ LWEI+ PYP + E +
Sbjct: 248 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 307
Query: 335 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAML 375
++ R P + M CW P +RP E+V L
Sbjct: 308 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 218 LAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD 277
L + +I + +A+G+ +L S+K +HRD+ N+LL + VKI DFG+AR +P
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 278 MTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 334
+ L +MAPE + Y + DV+SFG+ LWEI+ PYP + E +
Sbjct: 255 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 314
Query: 335 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAML 375
++ R P + M CW P +RP E+V L
Sbjct: 315 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 218 LAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD 277
L + +I + +A+G+ +L S+K +HRD+ N+LL + VKI DFG+AR +P
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 278 MTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 334
+ L +MAPE + Y + DV+SFG+ LWEI+ PYP + E +
Sbjct: 257 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 316
Query: 335 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAML 375
++ R P + M CW P +RP E+V L
Sbjct: 317 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 218 LAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD 277
L + +I + +A+G+ +L S+K +HRD+ N+LL + VKI DFG+AR +P
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 278 MTGETG--TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 334
+ L +MAPE + Y + DV+SFG+ LWEI+ PYP + E +
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 309
Query: 335 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAML 375
++ R P + M CW P +RP E+V L
Sbjct: 310 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 134/279 (48%), Gaps = 42/279 (15%)
Query: 100 KLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
K I KG FA+ R + G++VAVK++D +++ SL+ F +EV +
Sbjct: 21 KTIGKGNFAKVKLA---RHVLTGREVAVKIID------KTQLNPTSLQKLF-REVRIMKI 70
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI-----KNR 214
L+HPN+ K I+T+ +V+EY GG + YL+ K +
Sbjct: 71 LNHPNIVKLFEV--------IETEKT--------LYLVMEYASGGEVFDYLVAHGRMKEK 114
Query: 215 RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASN 274
+ F+ ++ + Y K IVHRD+K EN+LLD +KIADFG + E +
Sbjct: 115 EARAKFRQIVS-------AVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSN-EFTV 166
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYN-RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 333
+ + G+ Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V
Sbjct: 167 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 226
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+R R IP + N++K+ NP KR +++++
Sbjct: 227 LRGKYR--IPFYMSTDCENLLKKLLVLNPIKRGSLEQIM 263
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 115/262 (43%), Gaps = 30/262 (11%)
Query: 107 FARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFT-QEVAVWHKLDHP 163
+GTFG V R G+ A+K+L R E IA A T E V HP
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKIL-------RKEVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
+T A L C V+EY +GG L +L +R R +
Sbjct: 71 FLTALKYAFQTHDRL----------------CFVMEYANGGELFFHL--SRERVFTEERA 112
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG 283
++ L YL S+ +V+RD+K EN++LDK +KI DFG+ + S+ M G
Sbjct: 113 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG 172
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 343
T Y+APEVL + Y R D + G+ ++E+ C +P+ + + ++ + +R P
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FP 230
Query: 344 RCCPSSLANVMKRCWDANPDKR 365
R +++ +P +R
Sbjct: 231 RTLSPEAKSLLAGLLKKDPKQR 252
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 115/262 (43%), Gaps = 30/262 (11%)
Query: 107 FARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFT-QEVAVWHKLDHP 163
+GTFG V R G+ A+K+L R E IA A T E V HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKIL-------RKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
+T A L C V+EY +GG L +L +R R +
Sbjct: 66 FLTALKYAFQTHDRL----------------CFVMEYANGGELFFHL--SRERVFTEERA 107
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG 283
++ L YL S+ +V+RD+K EN++LDK +KI DFG+ + S+ M G
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG 167
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 343
T Y+APEVL + Y R D + G+ ++E+ C +P+ + + ++ + +R P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FP 225
Query: 344 RCCPSSLANVMKRCWDANPDKR 365
R +++ +P +R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 115/262 (43%), Gaps = 30/262 (11%)
Query: 107 FARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFT-QEVAVWHKLDHP 163
+GTFG V R G+ A+K+L R E IA A T E V HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKIL-------RKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
+T A L C V+EY +GG L +L +R R +
Sbjct: 66 FLTALKYAFQTHDRL----------------CFVMEYANGGELFFHL--SRERVFTEERA 107
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG 283
++ L YL S+ +V+RD+K EN++LDK +KI DFG+ + S+ M G
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG 167
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 343
T Y+APEVL + Y R D + G+ ++E+ C +P+ + + ++ + +R P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FP 225
Query: 344 RCCPSSLANVMKRCWDANPDKR 365
R +++ +P +R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 115/262 (43%), Gaps = 30/262 (11%)
Query: 107 FARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFT-QEVAVWHKLDHP 163
+GTFG V R G+ A+K+L R E IA A T E V HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKIL-------RKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
+T A L C V+EY +GG L +L +R R +
Sbjct: 66 FLTALKYAFQTHDRL----------------CFVMEYANGGELFFHL--SRERVFTEERA 107
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG 283
++ L YL S+ +V+RD+K EN++LDK +KI DFG+ + S+ M G
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG 167
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 343
T Y+APEVL + Y R D + G+ ++E+ C +P+ + + ++ + +R P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FP 225
Query: 344 RCCPSSLANVMKRCWDANPDKR 365
R +++ +P +R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 117/262 (44%), Gaps = 30/262 (11%)
Query: 107 FARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFT-QEVAVWHKLDHP 163
+GTFG V R G+ A+K+L R E IA A T E V HP
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKIL-------RKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
+T A QT + C V+EY +GG L +L +R R +
Sbjct: 69 FLTALKYA--------FQTHDR--------LCFVMEYANGGELFFHL--SRERVFTEERA 110
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG 283
++ L YL S+ +V+RD+K EN++LDK +KI DFG+ + S+ M G
Sbjct: 111 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 170
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 343
T Y+APEVL + Y R D + G+ ++E+ C +P+ + + ++ + +R P
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FP 228
Query: 344 RCCPSSLANVMKRCWDANPDKR 365
R +++ +P +R
Sbjct: 229 RTLSPEAKSLLAGLLKKDPKQR 250
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 117/262 (44%), Gaps = 30/262 (11%)
Query: 107 FARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFT-QEVAVWHKLDHP 163
+GTFG V R G+ A+K+L R E IA A T E V HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKIL-------RKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
+T A QT + C V+EY +GG L +L +R R +
Sbjct: 66 FLTALKYA--------FQTHDR--------LCFVMEYANGGELFFHL--SRERVFTEERA 107
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG 283
++ L YL S+ +V+RD+K EN++LDK +KI DFG+ + S+ M G
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 167
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 343
T Y+APEVL + Y R D + G+ ++E+ C +P+ + + ++ + +R P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FP 225
Query: 344 RCCPSSLANVMKRCWDANPDKR 365
R +++ +P +R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 117/262 (44%), Gaps = 30/262 (11%)
Query: 107 FARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFT-QEVAVWHKLDHP 163
+GTFG V R G+ A+K+L R E IA A T E V HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKIL-------RKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
+T A QT + C V+EY +GG L +L +R R +
Sbjct: 66 FLTALKYA--------FQTHDR--------LCFVMEYANGGELFFHL--SRERVFTEERA 107
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG 283
++ L YL S+ +V+RD+K EN++LDK +KI DFG+ + S+ M G
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 167
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 343
T Y+APEVL + Y R D + G+ ++E+ C +P+ + + ++ + +R P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FP 225
Query: 344 RCCPSSLANVMKRCWDANPDKR 365
R +++ +P +R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 119/232 (51%), Gaps = 25/232 (10%)
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
++R +E+ V H+ + P + F GA E++I +E+ GG
Sbjct: 49 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI----------------CMEHMDGG 92
Query: 205 ALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSK-KIVHRDVKTENMLLDKTRTVKIA 263
+L L K R + +++ ++++ + +GL+YL+ K KI+HRDVK N+L++ +K+
Sbjct: 93 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 150
Query: 264 DFGVARLEASNPHDMTGE-TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
DFGV+ +M E GT YM+PE L G+ Y+ + D++S G+ L E+ P P
Sbjct: 151 DFGVS---GQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRP 207
Query: 323 DLSFSEVTSAVVRQNLRPEIPRCCPS-SLANVMKRCWDANPDKRPEMDEVVA 373
++ E+ +V + P++P S + + +C NP +R ++ +++
Sbjct: 208 PMAIFELLDYIVNEP-PPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMV 258
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 33/263 (12%)
Query: 107 FARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
G++G+V++ I+ GQ VA+K + + S +E+++ + D P+
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIK-----------QVPVESDLQEIIKEISIMQQCDSPH 85
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
V K+ G+ ++L +V+EYC G++ S +I+ R + L +
Sbjct: 86 VVKYYGSYFKNTDL----------------WIVMEYCGAGSV-SDIIRLRNKTLTEDEIA 128
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ +GL YL + +HRD+K N+LL+ K+ADFGVA GT
Sbjct: 129 TILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGT 188
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI-- 342
+MAPEV+ YN D++S GI E+ PY D+ ++ N P
Sbjct: 189 PFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI-FMIPTNPPPTFRK 247
Query: 343 PRCCPSSLANVMKRCWDANPDKR 365
P + + +K+C +P++R
Sbjct: 248 PELWSDNFTDFVKQCLVKSPEQR 270
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 29/273 (10%)
Query: 103 IKGAFARGTFGTVHRG--IYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+ +G+F V+R I+ G +VA+K++D + A + EV + +L
Sbjct: 15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMID------KKAMYKAGMVQRVQNEVKIHCQL 68
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HP++ + N D SN+ +V+E CH G + YL KNR + +
Sbjct: 69 KHPSILELY---------NYFED-------SNYVYLVLEMCHNGEMNRYL-KNRVKPFSE 111
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG 280
+ G+ YL S I+HRD+ N+LL + +KIADFG+A + PH+
Sbjct: 112 NEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLAT-QLKMPHEKHY 170
Query: 281 ET-GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 339
GT Y++PE+ SA+ + DV+S G + + P+ + + VV +
Sbjct: 171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY- 229
Query: 340 PEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
E+P +++ + NP R + V+
Sbjct: 230 -EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVL 261
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 17 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 72
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 73 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 114
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ D GTL
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTL--CGTLD 172
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 230
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 231 TEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 38/277 (13%)
Query: 102 IIKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
I+ GTFG V G ++ G VAVK+L+ + RS + +R +E+
Sbjct: 19 ILGDTLGVGTFGKVKVGKHELTGHKVAVKILN--RQKIRSLDVVGKIR----REIQNLKL 72
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA 219
HP++ K I PS+ +V+EY GG L Y+ KN R L
Sbjct: 73 FRHPHIIKLYQV---------------ISTPSDIF-MVMEYVSGGELFDYICKNGR--LD 114
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT 279
K +L + G+ Y +VHRD+K EN+LLD KIADFG++ + S+ +
Sbjct: 115 EKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM-MSDGEFLR 173
Query: 280 GETGTLGYMAPEVLNGSAY-NRKCDVYSFGICLWEIYCCDMPYPD----LSFSEVTSAVV 334
G+ Y APEV++G Y + D++S G+ L+ + C +P+ D F ++ +
Sbjct: 174 XSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF 233
Query: 335 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 371
P+ S+ +++K +P KR + ++
Sbjct: 234 YT------PQYLNPSVISLLKHMLQVDPMKRATIKDI 264
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FG V++G + VAVK L + + L+ F QE+ V K H N+
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKL-----AAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ +G + +L C V V +G L + L++ + ++
Sbjct: 94 ELLGFSSDGDDL---------------CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 138
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE--TGT 284
A A G+++L +HRD+K+ N+LLD+ T KI+DFG+AR + GT
Sbjct: 139 AQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGT 198
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEI 314
YMAPE L G K D+YSFG+ L EI
Sbjct: 199 TAYMAPEALRGE-ITPKSDIYSFGVVLLEI 227
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FG V++G + VAVK L + + L+ F QE+ V K H N+
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKL-----AAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ +G + +L C V V +G L + L++ + ++
Sbjct: 94 ELLGFSSDGDDL---------------CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 138
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE--TGT 284
A A G+++L +HRD+K+ N+LLD+ T KI+DFG+AR + GT
Sbjct: 139 AQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGT 198
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEI 314
YMAPE L G K D+YSFG+ L EI
Sbjct: 199 TAYMAPEALRGE-ITPKSDIYSFGVVLLEI 227
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 118/272 (43%), Gaps = 37/272 (13%)
Query: 113 GTVHRGIYDGQDVAVKLL---DWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G + +G + G D+ VK+L DW R F +E HPNV +
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRD----------FNEECPRLRIFSHPNVLPVL 73
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALD 229
GA P+ ++ + G+L + L + + ++ ALD
Sbjct: 74 GACQSP--------------PAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALD 119
Query: 230 LARGLSYLQSKK--IVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
ARG ++L + + I + + ++ +D+ T +I+ V + +P G +
Sbjct: 120 XARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADV-KFSFQSP----GRXYAPAW 174
Query: 288 MAPEVLNGSAYN---RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPR 344
+APE L + R D +SF + LWE+ ++P+ DLS E+ V + LRP IP
Sbjct: 175 VAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPP 234
Query: 345 CCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
++ + K C + +P KRP+ D +V +LE
Sbjct: 235 GISPHVSKLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 45/293 (15%)
Query: 104 KGAFARGTFGTVHRGIY-DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDH 162
K G FG V++G+ DG VA+K R E + F E+ H
Sbjct: 44 KFLIGHGVFGKVYKGVLRDGAKVALK---------RRTPESSQGIEEFETEIETLSFCRH 94
Query: 163 PNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR--RRKLAF 220
P++ IG +E+ ++ +Y G LK +L + +++
Sbjct: 95 PHLVSLIGFCDERNEM----------------ILIYKYMENGNLKRHLYGSDLPTMSMSW 138
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR--LEASNPHDM 278
+ +++ + ARGL YL ++ I+HRDVK+ N+LLD+ KI DFG+++ E H
Sbjct: 139 EQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLX 198
Query: 279 TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC------DMPYPDLSFSE---- 328
GTLGY+ PE K DVYSFG+ L+E+ C +P ++ +E
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258
Query: 329 -----VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
+V NL +I + +C + + RP M +V+ LE
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 45/293 (15%)
Query: 104 KGAFARGTFGTVHRGIY-DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDH 162
K G FG V++G+ DG VA+K R E + F E+ H
Sbjct: 44 KFLIGHGVFGKVYKGVLRDGAKVALK---------RRTPESSQGIEEFETEIETLSFCRH 94
Query: 163 PNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR--RRKLAF 220
P++ IG +E+ ++ +Y G LK +L + +++
Sbjct: 95 PHLVSLIGFCDERNEM----------------ILIYKYMENGNLKRHLYGSDLPTMSMSW 138
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR--LEASNPHDM 278
+ +++ + ARGL YL ++ I+HRDVK+ N+LLD+ KI DFG+++ E H
Sbjct: 139 EQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLX 198
Query: 279 TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC------DMPYPDLSFSE---- 328
GTLGY+ PE K DVYSFG+ L+E+ C +P ++ +E
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258
Query: 329 -----VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLE 376
+V NL +I + +C + + RP M +V+ LE
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G FG V++G + VAVK L + + L+ F QE+ V K H N+ + +
Sbjct: 36 GGFGVVYKGYVNNTTVAVKKL-----AAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALD 229
G + +L C V V +G L + L++ + ++A
Sbjct: 91 GFSSDGDDL---------------CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQG 135
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE--TGTLGY 287
A G+++L +HRD+K+ N+LLD+ T KI+DFG+AR + GT Y
Sbjct: 136 AANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAY 195
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEI 314
MAPE L G K D+YSFG+ L EI
Sbjct: 196 MAPEALRGEI-TPKSDIYSFGVVLLEI 221
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 30/272 (11%)
Query: 103 IKGAFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I +G FG V+ R +A+K+L +++ E A + +EV + L
Sbjct: 38 IGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQLRREVEIQSHL 91
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HPN+ + G + + + ++EY G + Y + K
Sbjct: 92 RHPNILRLYGYFHDATRVYL----------------ILEYAPLGTV--YRELQKLSKFDE 133
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG 280
+ +LA LSY SK+++HRD+K EN+LL +KIADFG + S+ D
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL- 192
Query: 281 ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRP 340
GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R
Sbjct: 193 -CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-- 249
Query: 341 EIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P +++ R NP +RP + EV+
Sbjct: 250 TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 17 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 72
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 73 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 114
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T +GTL
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS--RRTTLSGTLD 172
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 230
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 231 TEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 30/272 (11%)
Query: 103 IKGAFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I +G FG V+ R +A+K+L +++ E A + +EV + L
Sbjct: 38 IGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQLRREVEIQSHL 91
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HPN+ + G + + + ++EY G + Y + K
Sbjct: 92 RHPNILRLYGYFHDATRVYL----------------ILEYAPLGTV--YRELQKLSKFDE 133
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG 280
+ +LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTT 191
Query: 281 ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRP 340
GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-- 249
Query: 341 EIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P +++ R NP +RP + EV+
Sbjct: 250 TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 130/299 (43%), Gaps = 47/299 (15%)
Query: 101 LIIKGAFARGTFGTVHRG----IYDGQD---VAVKLLDWGEESHRSEAEIASLRAAFTQE 153
+++K G FG V + QD VAVK L ++ R + F +E
Sbjct: 15 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKD---------FHRE 65
Query: 154 VAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK- 212
+ L H ++ KF G + L +V EY G L +L
Sbjct: 66 AELLTNLQHEHIVKFYGVCVEGDPL----------------IMVFEYMKHGDLNKFLRAH 109
Query: 213 ----------NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKI 262
N +L ++ +A +A G+ YL S+ VHRD+ T N L+ + VKI
Sbjct: 110 GPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI 169
Query: 263 ADFGVAR-LEASNPHDMTGETGT-LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC-DM 319
DFG++R + +++ + + G T + +M PE + + + DV+S G+ LWEI+
Sbjct: 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ 229
Query: 320 PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAI 378
P+ LS +EV + + + + PR CP + +M CW P R + + +L+ +
Sbjct: 230 PWYQLSNNEVIECITQGRVL-QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 21 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 76
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 77 RLYGYFHDATRVYL----------------ILEYAPRGEVYKEL--QKLSKFDEQRTATY 118
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T GTL
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLD 176
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 234
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 30/268 (11%)
Query: 107 FARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
+G FG V+ R +A+K+L +++ E A + +EV + L HPN
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ + G + + + ++EY G + L + K +
Sbjct: 87 ILRLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTA 128
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T GT
Sbjct: 129 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGT 186
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPR 344
L Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 187 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPD 244
Query: 345 CCPSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 245 FVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 26/270 (9%)
Query: 103 IKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDH 162
I +G FG V Y ++ K + + +++ E A + +EV + L H
Sbjct: 15 IGRPLGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 163 PNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKV 222
PN+ + G + + + ++EY G + L + K +
Sbjct: 71 PNILRLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQR 112
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET 282
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ D
Sbjct: 113 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL--C 170
Query: 283 GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 342
GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TF 228
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P +++ R NP +RP + EV+
Sbjct: 229 PDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 21 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 76
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 77 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 118
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T GTL
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLD 176
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 234
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 21 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 76
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 77 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 118
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T GTL
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLD 176
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE + G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 177 YLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 234
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 235 TEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 20 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 75
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 76 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 117
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T GTL
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLD 175
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 233
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 234 TEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 26/270 (9%)
Query: 103 IKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDH 162
I +G FG V Y ++ K + + +++ E A + +EV + L H
Sbjct: 12 IGRPLGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 163 PNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKV 222
PN+ + G + + + ++EY G + L + K +
Sbjct: 68 PNILRLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQR 109
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET 282
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T
Sbjct: 110 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTDLC 167
Query: 283 GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 342
GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TF 225
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P +++ R NP +RP + EV+
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 19 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 74
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 75 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 116
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T GTL
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLD 174
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 232
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 36/277 (12%)
Query: 106 AFARGTFGTVHRGIY--DGQDV----AVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
G FGTV++GI+ DG++V A+K+L S ++ EI E V
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLR-ENTSPKANKEI-------LDEAYVMAG 75
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA 219
+ P V++ +G + ++ +V + G L ++ +NR R L
Sbjct: 76 VGSPYVSRLLGICLTST-----------------VQLVTQLMPYGCLLDHVRENRGR-LG 117
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT 279
+ ++ + +A+G+SYL+ ++VHRD+ N+L+ VKI DFG+ARL + +
Sbjct: 118 SQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH 177
Query: 280 GETGT--LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQ 336
+ G + +MA E + + + DV+S+G+ +WE+ PY + E+ + +
Sbjct: 178 ADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG 237
Query: 337 NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
P+ P C + +M +CW + + RP E+V+
Sbjct: 238 ERLPQ-PPICTIDVYMIMVKCWMIDSECRPRFRELVS 273
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 26/270 (9%)
Query: 103 IKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDH 162
I +G FG V Y ++ K + + +++ E A + +EV + L H
Sbjct: 12 IGRPLGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 163 PNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKV 222
PN+ + G + + + ++EY G + L + K +
Sbjct: 68 PNILRLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQR 109
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET 282
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T
Sbjct: 110 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLC 167
Query: 283 GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 342
GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TF 225
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P +++ R NP +RP + EV+
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 21 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 76
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 77 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 118
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T GTL
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTDLCGTLD 176
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 234
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 19 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 74
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 75 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 116
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T GTL
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLD 174
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 232
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 40/274 (14%)
Query: 103 IKGAFARGTFGTVHRGIYDGQDV--AVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I G G FG V++ V A K++D +SE E+ + E+ +
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVID-----TKSEEELED----YMVEIDILASC 91
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR--RKL 218
DHPN+ K + A + L +++E+C GGA+ + +++ R +
Sbjct: 92 DHPNIVKLLDAFYYENNL----------------WILIEFCAGGAVDAVMLELERPLTES 135
Query: 219 AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDM 278
+VV + LD L+YL KI+HRD+K N+L +K+ADFGV+
Sbjct: 136 QIQVVCKQTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR 192
Query: 279 TGETGTLGYMAPEVL-----NGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 333
GT +MAPEV+ Y+ K DV+S GI L E+ + P+ +L+ V +
Sbjct: 193 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 252
Query: 334 VRQNLRPEI--PRCCPSSLANVMKRCWDANPDKR 365
+ P + P S+ + +K+C + N D R
Sbjct: 253 AKSE-PPTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 17 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 72
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 73 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 114
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T GTL
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTDLCGTLD 172
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 230
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 231 TEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 26/270 (9%)
Query: 103 IKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDH 162
I +G FG V Y ++ K + + +++ E A + +EV + L H
Sbjct: 12 IGRPLGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 163 PNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKV 222
PN+ + G + + + ++EY G + L + K +
Sbjct: 68 PNILRLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQR 109
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET 282
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T
Sbjct: 110 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTELC 167
Query: 283 GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 342
GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TF 225
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P +++ R NP +RP + EV+
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 26/270 (9%)
Query: 103 IKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDH 162
I +G FG V Y ++ K + + +++ E A + +EV + L H
Sbjct: 11 IGRPLGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 163 PNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKV 222
PN+ + G + + + ++EY G + L + K +
Sbjct: 67 PNILRLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQR 108
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET 282
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T
Sbjct: 109 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLC 166
Query: 283 GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 342
GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TF 224
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P +++ R NP +RP + EV+
Sbjct: 225 PDFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 125/267 (46%), Gaps = 30/267 (11%)
Query: 110 GTFG--TVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
G+FG + + DG+ +K ++ S + E +EVAV + HPN+ +
Sbjct: 35 GSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES-------RREVAVLANMKHPNIVQ 87
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFK--VVIQ 225
+ + +NG + +V++YC GG L + N ++ + F+ ++
Sbjct: 88 YRESF---------EENGSL-------YIVMDYCEGGDLFKRI--NAQKGVLFQEDQILD 129
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL 285
+ + L ++ +KI+HRD+K++N+ L K TV++ DFG+AR+ S GT
Sbjct: 130 WFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTP 189
Query: 286 GYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRC 345
Y++PE+ YN K D+++ G L+E+ + S + ++ + P +
Sbjct: 190 YYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-PPVSLH 248
Query: 346 CPSSLANVMKRCWDANPDKRPEMDEVV 372
L +++ + + NP RP ++ ++
Sbjct: 249 YSYDLRSLVSQLFKRNPRDRPSVNSIL 275
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 16 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 72 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 113
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T GTL
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTXLCGTLD 171
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 229
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 136/313 (43%), Gaps = 69/313 (22%)
Query: 108 ARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK--LDHPNV 165
+G +G V RG + G++VAVK+ S R E ++ +E +++ L H N+
Sbjct: 17 GKGRYGEVWRGSWQGENVAVKIF-----SSRDEK-------SWFRETELYNTVMLRHENI 64
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
FI + M + + Q ++ Y G+L YL + L ++
Sbjct: 65 LGFIASDMTSRHSSTQ------------LWLITHYHEMGSLYDYL---QLTTLDTVSCLR 109
Query: 226 LALDLARGLSYLQSK--------KIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD 277
+ L +A GL++L + I HRD+K++N+L+ K IAD G+A + + + +
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169
Query: 278 M----TGETGTLGYMAPEVLNGS-------AYNRKCDVYSFGICLWEIY----------- 315
+ GT YMAPEVL+ + +Y R D+++FG+ LWE+
Sbjct: 170 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKR-VDIWAFGLVLWEVARRMVSNGIVED 228
Query: 316 ----CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPS-----SLANVMKRCWDANPDKRP 366
D+ D SF ++ V RP IP S SLA +MK CW NP R
Sbjct: 229 YKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARL 288
Query: 367 EMDEVVAMLEAID 379
+ L ID
Sbjct: 289 TALRIKKTLTKID 301
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 136/313 (43%), Gaps = 69/313 (22%)
Query: 108 ARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK--LDHPNV 165
+G +G V RG + G++VAVK+ S R E ++ +E +++ L H N+
Sbjct: 17 GKGRYGEVWRGSWQGENVAVKIF-----SSRDEK-------SWFRETELYNTVMLRHENI 64
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
FI + M + + Q ++ Y G+L YL + L ++
Sbjct: 65 LGFIASDMTSRHSSTQ------------LWLITHYHEMGSLYDYL---QLTTLDTVSCLR 109
Query: 226 LALDLARGLSYLQSK--------KIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD 277
+ L +A GL++L + I HRD+K++N+L+ K IAD G+A + + + +
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169
Query: 278 M----TGETGTLGYMAPEVLNGS-------AYNRKCDVYSFGICLWEIY----------- 315
+ GT YMAPEVL+ + +Y R D+++FG+ LWE+
Sbjct: 170 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKR-VDIWAFGLVLWEVARRMVSNGIVED 228
Query: 316 ----CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPS-----SLANVMKRCWDANPDKRP 366
D+ D SF ++ V RP IP S SLA +MK CW NP R
Sbjct: 229 YKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARL 288
Query: 367 EMDEVVAMLEAID 379
+ L ID
Sbjct: 289 TALRIKKTLTKID 301
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 16 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 72 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 113
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T GTL
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTDLCGTLD 171
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 229
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 21 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 76
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 77 RLYGYFHDATRVYL----------------ILEYAPRGEVYKEL--QKLSKFDEQRTATY 118
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ GTL
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL--XGTLD 176
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 234
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 40/274 (14%)
Query: 103 IKGAFARGTFGTVHRGIYDGQDV--AVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I G G FG V++ V A K++D +SE E+ + E+ +
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVID-----TKSEEELED----YMVEIDILASC 91
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR--RKL 218
DHPN+ K + A + L +++E+C GGA+ + +++ R +
Sbjct: 92 DHPNIVKLLDAFYYENNL----------------WILIEFCAGGAVDAVMLELERPLTES 135
Query: 219 AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDM 278
+VV + LD L+YL KI+HRD+K N+L +K+ADFGV+
Sbjct: 136 QIQVVCKQTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRR 192
Query: 279 TGETGTLGYMAPEVL-----NGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 333
GT +MAPEV+ Y+ K DV+S GI L E+ + P+ +L+ V +
Sbjct: 193 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 252
Query: 334 VRQNLRPEI--PRCCPSSLANVMKRCWDANPDKR 365
+ P + P S+ + +K+C + N D R
Sbjct: 253 AKSE-PPTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 39/277 (14%)
Query: 103 IKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I G+FG V + GQ VA+K+++ + + ++ +E++ L
Sbjct: 18 IVKTLGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIEREISYLRLL 71
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HP++ K E+ +V+EY G L Y+++ R K++
Sbjct: 72 RHPHIIKLYDVIKSKDEI----------------IMVIEYA-GNELFDYIVQ--RDKMSE 112
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG 280
+ + + + Y KIVHRD+K EN+LLD+ VKIADFG++ + ++ + +
Sbjct: 113 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKT 171
Query: 281 ETGTLGYMAPEVLNGSAY-NRKCDVYSFGICLWEIYCCDMPYPDLS----FSEVTSAVVR 335
G+ Y APEV++G Y + DV+S G+ L+ + C +P+ D S F +++ V
Sbjct: 172 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY- 230
Query: 336 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+P+ A ++KR NP R + E++
Sbjct: 231 -----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 262
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 39/277 (14%)
Query: 103 IKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I G+FG V + GQ VA+K+++ + + ++ +E++ L
Sbjct: 8 IVKTLGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIEREISYLRLL 61
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HP++ K E+ +V+EY G L Y+++ R K++
Sbjct: 62 RHPHIIKLYDVIKSKDEI----------------IMVIEYA-GNELFDYIVQ--RDKMSE 102
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG 280
+ + + + Y KIVHRD+K EN+LLD+ VKIADFG++ + ++ + +
Sbjct: 103 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKT 161
Query: 281 ETGTLGYMAPEVLNGSAY-NRKCDVYSFGICLWEIYCCDMPYPDLS----FSEVTSAVVR 335
G+ Y APEV++G Y + DV+S G+ L+ + C +P+ D S F +++ V
Sbjct: 162 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY- 220
Query: 336 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+P+ A ++KR NP R + E++
Sbjct: 221 -----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 252
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 39/277 (14%)
Query: 103 IKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I G+FG V + GQ VA+K+++ + + ++ +E++ L
Sbjct: 17 IVKTLGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIEREISYLRLL 70
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HP++ K E+ +V+EY G L Y+++ R K++
Sbjct: 71 RHPHIIKLYDVIKSKDEI----------------IMVIEYA-GNELFDYIVQ--RDKMSE 111
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG 280
+ + + + Y KIVHRD+K EN+LLD+ VKIADFG++ + ++ + +
Sbjct: 112 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKT 170
Query: 281 ETGTLGYMAPEVLNGSAY-NRKCDVYSFGICLWEIYCCDMPYPDLS----FSEVTSAVVR 335
G+ Y APEV++G Y + DV+S G+ L+ + C +P+ D S F +++ V
Sbjct: 171 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY- 229
Query: 336 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+P+ A ++KR NP R + E++
Sbjct: 230 -----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 261
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 39/277 (14%)
Query: 103 IKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I G+FG V + GQ VA+K+++ + + ++ +E++ L
Sbjct: 12 IVKTLGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIEREISYLRLL 65
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HP++ K E+ +V+EY G L Y+++ R K++
Sbjct: 66 RHPHIIKLYDVIKSKDEI----------------IMVIEYA-GNELFDYIVQ--RDKMSE 106
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG 280
+ + + + Y KIVHRD+K EN+LLD+ VKIADFG++ + ++ + +
Sbjct: 107 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKT 165
Query: 281 ETGTLGYMAPEVLNGSAY-NRKCDVYSFGICLWEIYCCDMPYPDLS----FSEVTSAVVR 335
G+ Y APEV++G Y + DV+S G+ L+ + C +P+ D S F +++ V
Sbjct: 166 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY- 224
Query: 336 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+P+ A ++KR NP R + E++
Sbjct: 225 -----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 256
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 136/313 (43%), Gaps = 69/313 (22%)
Query: 108 ARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK--LDHPNV 165
+G +G V RG + G++VAVK+ S R E ++ +E +++ L H N+
Sbjct: 46 GKGRYGEVWRGSWQGENVAVKIF-----SSRDEK-------SWFRETELYNTVMLRHENI 93
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
FI + M + + Q ++ Y G+L YL + L ++
Sbjct: 94 LGFIASDMTSRHSSTQ------------LWLITHYHEMGSLYDYL---QLTTLDTVSCLR 138
Query: 226 LALDLARGLSYLQSK--------KIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD 277
+ L +A GL++L + I HRD+K++N+L+ K IAD G+A + + + +
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 198
Query: 278 M----TGETGTLGYMAPEVLNGS-------AYNRKCDVYSFGICLWEIY----------- 315
+ GT YMAPEVL+ + +Y R D+++FG+ LWE+
Sbjct: 199 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKR-VDIWAFGLVLWEVARRMVSNGIVED 257
Query: 316 ----CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPS-----SLANVMKRCWDANPDKRP 366
D+ D SF ++ V RP IP S SLA +MK CW NP R
Sbjct: 258 YKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARL 317
Query: 367 EMDEVVAMLEAID 379
+ L ID
Sbjct: 318 TALRIKKTLTKID 330
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 40/274 (14%)
Query: 103 IKGAFARGTFGTVHRGIYDGQDV--AVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I G G FG V++ V A K++D +SE E+ + E+ +
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVID-----TKSEEELED----YMVEIDILASC 91
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR--RKL 218
DHPN+ K + A + L +++E+C GGA+ + +++ R +
Sbjct: 92 DHPNIVKLLDAFYYENNL----------------WILIEFCAGGAVDAVMLELERPLTES 135
Query: 219 AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDM 278
+VV + LD L+YL KI+HRD+K N+L +K+ADFGV+
Sbjct: 136 QIQVVCKQTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRR 192
Query: 279 TGETGTLGYMAPEVL-----NGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 333
GT +MAPEV+ Y+ K DV+S GI L E+ + P+ +L+ V +
Sbjct: 193 DXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 252
Query: 334 VRQNLRPEI--PRCCPSSLANVMKRCWDANPDKR 365
+ P + P S+ + +K+C + N D R
Sbjct: 253 AKSE-PPTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 13 LGKGKFGNV----YLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 68
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 69 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 110
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T GTL
Sbjct: 111 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLD 168
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 226
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 227 TEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 132/274 (48%), Gaps = 41/274 (14%)
Query: 105 GAFARGTFGTVHRGIYDGQDVAVKLLD---WGEESHRSEAEIASLRAAFTQEVAVWHKLD 161
G FA+ I G+ VA+K++D G + R + EI +L+ L
Sbjct: 21 GGFAKVKLAC---HILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK-----------NLR 66
Query: 162 HPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI-KNRRRKLAF 220
H ++ + H+ +N +V+EYC GG L Y+I ++R +
Sbjct: 67 HQHICQLY----------------HVLETANKIFMVLEYCPGGELFDYIISQDRLSEEET 110
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV-ARLEASNPHDMT 279
+VV + + ++Y+ S+ HRD+K EN+L D+ +K+ DFG+ A+ + + + +
Sbjct: 111 RVVFR---QIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQ 167
Query: 280 GETGTLGYMAPEVLNGSAY-NRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL 338
G+L Y APE++ G +Y + DV+S GI L+ + C +P+ D + + ++R
Sbjct: 168 TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG-- 225
Query: 339 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+ ++P+ S ++++ +P KR M ++
Sbjct: 226 KYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 127/298 (42%), Gaps = 66/298 (22%)
Query: 108 ARGTFGTVHRGIYDGQDVAVKLLDWGE-ESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
ARG FG V + VAVK+ + +S +SE EI S + H N+
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPG-----------MKHENLL 72
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+FI A S L ++ ++ + G+L YL N + + + +
Sbjct: 73 QFIAAEKRGSNLEVE------------LWLITAFHDKGSLTDYLKGN---IITWNELCHV 117
Query: 227 ALDLARGLSYLQSK-----------KIVHRDVKTENMLLDKTRTVKIADFGVA-RLEASN 274
A ++RGLSYL I HRD K++N+LL T +ADFG+A R E
Sbjct: 118 AETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGK 177
Query: 275 -PHDMTGETGTLGYMAPEVLNGSA-YNR----KCDVYSFGICLWEIY----CCDMPYPDL 324
P D G+ GT YMAPEVL G+ + R + D+Y+ G+ LWE+ D P +
Sbjct: 178 PPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEY 237
Query: 325 ------------SFSEVTSAVVRQNLRPEI-----PRCCPSSLANVMKRCWDANPDKR 365
S E+ VV + +RP I + L ++ CWD + + R
Sbjct: 238 MLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEAR 295
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 129/298 (43%), Gaps = 48/298 (16%)
Query: 104 KGAFARGTFGTVHRG-IYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDH 162
K RG FG V++G + DG VAVK L +E E+ F EV + H
Sbjct: 43 KNILGRGGFGKVYKGRLADGTLVAVKRL---KEERXQGGELQ-----FQTEVEMISMAVH 94
Query: 163 PNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRK--LAF 220
N+ + G M +E +V Y G++ S L + + L +
Sbjct: 95 RNLLRLRGFCMTPTE----------------RLLVYPYMANGSVASCLRERPESQPPLDW 138
Query: 221 KVVIQLALDLARGLSYLQSK---KIVHRDVKTENMLLDKTRTVKIADFGVARL-EASNPH 276
++AL ARGL+YL KI+HRDVK N+LLD+ + DFG+A+L + + H
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 198
Query: 277 DMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY--------------- 321
GT+G++APE L+ + K DV+ +G+ L E+ +
Sbjct: 199 VXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 258
Query: 322 --PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEA 377
L + A+V +L+ L V C ++P +RP+M EVV MLE
Sbjct: 259 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 19 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 74
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 75 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 116
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ GTL
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRAALCGTLD 174
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 232
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 16 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 72 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 113
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ GTL
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRAALCGTLD 171
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 229
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 19 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 74
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 75 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 116
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ GTL
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL--CGTLD 174
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 232
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 18 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 73
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 74 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 115
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ GTL
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL--CGTLD 173
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 231
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 232 TEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 16 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 72 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 113
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ GTL
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL--CGTLD 171
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 229
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 18 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 73
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 74 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 115
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIA+FG + S+ T GTL
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS--RRTTLCGTLD 173
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 231
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 232 TEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 16 LGKGKFGNV----YLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G ++ + + ++EY G + L + K +
Sbjct: 72 RLYGYFHDSTRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 113
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SKK++HRD+K EN+LL +KIADFG + S+ GTL
Sbjct: 114 ITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRAALCGTLD 171
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ + + R P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEF--TFPDFV 229
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 19 LGKGKFGNV----YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 74
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L + K +
Sbjct: 75 RLYGYFHDATRVYL----------------ILEYAPLGTVYREL--QKLSKFDEQRTATY 116
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIA+FG + S+ T GTL
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS--RRTTLCGTLD 174
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFV 232
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R NP +RP + EV+
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 130/300 (43%), Gaps = 69/300 (23%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK--LDHPN 164
+G +G V G + G+ VAVK+ EE A++ +E ++ + H N
Sbjct: 45 IGKGRYGEVWMGKWRGEKVAVKVFFTTEE------------ASWFRETEIYQTVLMRHEN 92
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ FI A + + Q ++ +Y G+L YL + L K ++
Sbjct: 93 ILGFIAADIKGTGSWTQ------------LYLITDYHENGSLYDYL---KSTTLDAKSML 137
Query: 225 QLALDLARGLSYLQSK--------KIVHRDVKTENMLLDKTRTVKIADFGVA--RLEASN 274
+LA GL +L ++ I HRD+K++N+L+ K T IAD G+A + +N
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN 197
Query: 275 PHDMTGET--GTLGYMAPEVLNGSAYNRK-------CDVYSFGICLWEIY--CCD----- 318
D+ T GT YM PEVL+ S NR D+YSFG+ LWE+ C
Sbjct: 198 EVDIPPNTRVGTKRYMPPEVLDESL-NRNHFQSYIMADMYSFGLILWEVARRCVSGGIVE 256
Query: 319 ---MPYPDL-----SFSEVTSAVVRQNLRPEIPRC-----CPSSLANVMKRCWDANPDKR 365
+PY DL S+ ++ V + LRP P C + +M CW NP R
Sbjct: 257 EYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASR 316
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 128/268 (47%), Gaps = 35/268 (13%)
Query: 106 AFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
+G+FG V + GQ+ AVK++ + +++ E + +EV + +LDHP
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHP 110
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
N+ K D G + +V E GG L +I R++ +
Sbjct: 111 NIMKL---------YEFFEDKG-------YFYLVGEVYTGGELFDEIIS--RKRFSEVDA 152
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFGVA-RLEASNPHDMT 279
++ + G++Y+ KIVHRD+K EN+LL+ K ++I DFG++ EAS M
Sbjct: 153 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MK 210
Query: 280 GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 339
+ GT Y+APEVL+G+ Y+ KCDV+S G+ L+ + P+ + ++ V +
Sbjct: 211 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 269
Query: 340 PEIP--RCCPSSLANVMKRCWDANPDKR 365
E+P + S +++++ P R
Sbjct: 270 FELPQWKKVSESAKDLIRKMLTYVPSMR 297
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 128/268 (47%), Gaps = 35/268 (13%)
Query: 106 AFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
+G+FG V + GQ+ AVK++ + +++ E + +EV + +LDHP
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHP 109
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
N+ K D G + +V E GG L +I R++ +
Sbjct: 110 NIMKL---------YEFFEDKG-------YFYLVGEVYTGGELFDEIIS--RKRFSEVDA 151
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFGVA-RLEASNPHDMT 279
++ + G++Y+ KIVHRD+K EN+LL+ K ++I DFG++ EAS M
Sbjct: 152 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MK 209
Query: 280 GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 339
+ GT Y+APEVL+G+ Y+ KCDV+S G+ L+ + P+ + ++ V +
Sbjct: 210 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 268
Query: 340 PEIP--RCCPSSLANVMKRCWDANPDKR 365
E+P + S +++++ P R
Sbjct: 269 FELPQWKKVSESAKDLIRKMLTYVPSMR 296
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
V+EY +GG L ++ + L+ A ++ GL +L SK IV+RD+K +N+LLD
Sbjct: 95 FVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFLHSKGIVYRDLKLDNILLD 152
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
K +KIADFG+ + GT Y+APE+L G YN D +SFG+ L+E+
Sbjct: 153 KDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 212
Query: 316 CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
P+ E+ ++ N P PR +++ + + P+KR
Sbjct: 213 IGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKR 260
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
V+EY +GG L ++ + L+ A ++ GL +L SK IV+RD+K +N+LLD
Sbjct: 96 FVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFLHSKGIVYRDLKLDNILLD 153
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
K +KIADFG+ + GT Y+APE+L G YN D +SFG+ L+E+
Sbjct: 154 KDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 213
Query: 316 CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
P+ E+ ++ N P PR +++ + + P+KR
Sbjct: 214 IGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKR 261
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 128/268 (47%), Gaps = 35/268 (13%)
Query: 106 AFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
+G+FG V + GQ+ AVK++ + +++ E + +EV + +LDHP
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHP 86
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
N+ K D G+ +V E GG L +I R++ +
Sbjct: 87 NIMKL---------YEFFEDKGYF-------YLVGEVYTGGELFDEIIS--RKRFSEVDA 128
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFGVA-RLEASNPHDMT 279
++ + G++Y+ KIVHRD+K EN+LL+ K ++I DFG++ EAS M
Sbjct: 129 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MK 186
Query: 280 GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 339
+ GT Y+APEVL+G+ Y+ KCDV+S G+ L+ + P+ + ++ V +
Sbjct: 187 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 245
Query: 340 PEIP--RCCPSSLANVMKRCWDANPDKR 365
E+P + S +++++ P R
Sbjct: 246 FELPQWKKVSESAKDLIRKMLTYVPSMR 273
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 132/284 (46%), Gaps = 41/284 (14%)
Query: 95 EIDPAKLI-IKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFT 151
++DP ++ I G G FG V++ G A K+++ +SE E+ +
Sbjct: 14 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIE-----TKSEEELED----YI 64
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E+ + DHP + K +GA +L +++E+C GGA+ + ++
Sbjct: 65 VEIEILATCDHPYIVKLLGAYYHDGKL----------------WIMIEFCPGGAVDAIML 108
Query: 212 KNRR--RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR 269
+ R + +VV + L+ L++L SK+I+HRD+K N+L+ +++ADFGV+
Sbjct: 109 ELDRGLTEPQIQVVCRQMLE---ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSA 165
Query: 270 LEASNPHDMTGETGTLGYMAPEV-----LNGSAYNRKCDVYSFGICLWEIYCCDMPYPDL 324
GT +MAPEV + + Y+ K D++S GI L E+ + P+ +L
Sbjct: 166 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225
Query: 325 SFSEVTSAVVRQNLRPEI--PRCCPSSLANVMKRCWDANPDKRP 366
+ V + + + P + P + +K D NP+ RP
Sbjct: 226 NPMRVLLKIAKSD-PPTLLTPSKWSVEFRDFLKIALDKNPETRP 268
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G FG V++G + VAVK L + + L+ F QE+ V K H N+ + +
Sbjct: 33 GGFGVVYKGYVNNTTVAVKKL-----AAMVDITTEELKQQFDQEIKVXAKCQHENLVELL 87
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALD 229
G + +L C V V +G L + L++ ++A
Sbjct: 88 GFSSDGDDL---------------CLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQG 132
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE--TGTLGY 287
A G+++L +HRD+K+ N+LLD+ T KI+DFG+AR + GT Y
Sbjct: 133 AANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAY 192
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEI 314
APE L G K D+YSFG+ L EI
Sbjct: 193 XAPEALRGEI-TPKSDIYSFGVVLLEI 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 128/268 (47%), Gaps = 35/268 (13%)
Query: 106 AFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
+G+FG V + GQ+ AVK++ + +++ E + +EV + +LDHP
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHP 92
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
N+ K D G+ +V E GG L +I R++ +
Sbjct: 93 NIMKL---------YEFFEDKGYF-------YLVGEVYTGGELFDEIIS--RKRFSEVDA 134
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFGVA-RLEASNPHDMT 279
++ + G++Y+ KIVHRD+K EN+LL+ K ++I DFG++ EAS M
Sbjct: 135 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MK 192
Query: 280 GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 339
+ GT Y+APEVL+G+ Y+ KCDV+S G+ L+ + P+ + ++ V +
Sbjct: 193 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 251
Query: 340 PEIP--RCCPSSLANVMKRCWDANPDKR 365
E+P + S +++++ P R
Sbjct: 252 FELPQWKKVSESAKDLIRKMLTYVPSMR 279
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 129/282 (45%), Gaps = 37/282 (13%)
Query: 95 EIDPAKLI-IKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFT 151
++DP ++ I G G FG V++ G A K+++ +SE E+ +
Sbjct: 6 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIE-----TKSEEELED----YI 56
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
E+ + DHP + K +GA +L +++E+C GGA+ + ++
Sbjct: 57 VEIEILATCDHPYIVKLLGAYYHDGKL----------------WIMIEFCPGGAVDAIML 100
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
+ R L + + + L++L SK+I+HRD+K N+L+ +++ADFGV+
Sbjct: 101 E-LDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 159
Query: 272 ASNPHDMTGETGTLGYMAPEV-----LNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSF 326
GT +MAPEV + + Y+ K D++S GI L E+ + P+ +L+
Sbjct: 160 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 219
Query: 327 SEVTSAVVRQNLRPEI--PRCCPSSLANVMKRCWDANPDKRP 366
V + + + P + P + +K D NP+ RP
Sbjct: 220 MRVLLKIAKSD-PPTLLTPSKWSVEFRDFLKIALDKNPETRP 260
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 33/251 (13%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQ-EVAVWHKLDHPNVT 166
G+FG VH R ++G+ A+K+L + E + + T E + + HP +
Sbjct: 17 GSFGRVHLIRSRHNGRYYAMKVL-------KKEIVVRLKQVEHTNDERLMLSIVTHPFII 69
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G ++ ++++Y GG L S L K++R V
Sbjct: 70 RMWGTFQDAQQI----------------FMIMDYIEGGELFSLLRKSQR--FPNPVAKFY 111
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
A ++ L YL SK I++RD+K EN+LLDK +KI DFG A+ + + GT
Sbjct: 112 AAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL---CGTPD 168
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+APEV++ YN+ D +SFGI ++E+ P+ D + + ++ LR P
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELR--FPPFF 226
Query: 347 PSSLANVMKRC 357
+ +++ R
Sbjct: 227 NEDVKDLLSRL 237
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 31/265 (11%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSE-AEIASLRAAFTQEVAVWHKLDHPNVT 166
G VH R + D +DVAVK+L R++ A S F +E L+HP +
Sbjct: 23 GGMSEVHLARDLRDHRDVAVKVL-------RADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSN-FCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
D G P+ +V+EY G L+ I + + K I+
Sbjct: 76 AVY-------------DTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIE 120
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL 285
+ D + L++ I+HRDVK N+++ T VK+ DFG+AR A + + +T +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 286 G---YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 342
G Y++PE G + + + DVYS G L+E+ + P+ S V VR++ P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPS 240
Query: 343 PR--CCPSSLANVMKRCWDANPDKR 365
R + L V+ + NP+ R
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 5/173 (2%)
Query: 194 CCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK-IVHRDVKTENM 252
C V+EY +GG L +L +R R + ++ L YL S+K +V+RD+K EN+
Sbjct: 226 LCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENL 283
Query: 253 LLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLW 312
+LDK +KI DFG+ + + M GT Y+APEVL + Y R D + G+ ++
Sbjct: 284 MLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 343
Query: 313 EIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
E+ C +P+ + ++ ++ + +R PR +++ +P +R
Sbjct: 344 EMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 5/173 (2%)
Query: 194 CCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK-IVHRDVKTENM 252
C V+EY +GG L +L +R R + ++ L YL S+K +V+RD+K EN+
Sbjct: 223 LCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENL 280
Query: 253 LLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLW 312
+LDK +KI DFG+ + + M GT Y+APEVL + Y R D + G+ ++
Sbjct: 281 MLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 340
Query: 313 EIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
E+ C +P+ + ++ ++ + +R PR +++ +P +R
Sbjct: 341 EMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 104 KGAFARGTFGTVHRG-IYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDH 162
K RG FG V++G + DG VAVK L +E E+ F EV + H
Sbjct: 35 KNILGRGGFGKVYKGRLADGXLVAVKRL---KEERTQGGELQ-----FQTEVEMISMAVH 86
Query: 163 PNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRK--LAF 220
N+ + G M +E +V Y G++ S L + + L +
Sbjct: 87 RNLLRLRGFCMTPTE----------------RLLVYPYMANGSVASCLRERPESQPPLDW 130
Query: 221 KVVIQLALDLARGLSYLQSK---KIVHRDVKTENMLLDKTRTVKIADFGVARL-EASNPH 276
++AL ARGL+YL KI+HRDVK N+LLD+ + DFG+A+L + + H
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 190
Query: 277 DMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY--------------- 321
G +G++APE L+ + K DV+ +G+ L E+ +
Sbjct: 191 VXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250
Query: 322 --PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEA 377
L + A+V +L+ L V C ++P +RP+M EVV MLE
Sbjct: 251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 31/265 (11%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSE-AEIASLRAAFTQEVAVWHKLDHPNVT 166
G VH R + D +DVAVK+L R++ A S F +E L+HP +
Sbjct: 23 GGMSEVHLARDLRDHRDVAVKVL-------RADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSN-FCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
D G P+ +V+EY G L+ I + + K I+
Sbjct: 76 AVY-------------DTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIE 120
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL 285
+ D + L++ I+HRDVK N+++ T VK+ DFG+AR A + + +T +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 286 G---YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 342
G Y++PE G + + + DVYS G L+E+ + P+ S V VR++ P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
Query: 343 PR--CCPSSLANVMKRCWDANPDKR 365
R + L V+ + NP+ R
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENR 265
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 40/278 (14%)
Query: 102 IIKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
++ GTFG V G + G VAVK+L+ R + + +E+
Sbjct: 14 VLGDTLGVGTFGKVKIGEHQLTGHKVAVKILN------RQKIRSLDVVGKIKREIQNLKL 67
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN-RRRKL 218
HP++ K I P++F +V+EY GG L Y+ K+ R ++
Sbjct: 68 FRHPHIIKLYQV---------------ISTPTDFF-MVMEYVSGGELFDYICKHGRVEEM 111
Query: 219 AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDM 278
+ + Q L + Y +VHRD+K EN+LLD KIADFG++ + S+ +
Sbjct: 112 EARRLFQQILS---AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM-MSDGEFL 167
Query: 279 TGETGTLGYMAPEVLNGSAY-NRKCDVYSFGICLWEIYCCDMPYPD----LSFSEVTSAV 333
G+ Y APEV++G Y + D++S G+ L+ + C +P+ D F ++ V
Sbjct: 168 RDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV 227
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 371
IP S+A ++ +P KR + ++
Sbjct: 228 FY------IPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 5/172 (2%)
Query: 195 CVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK-IVHRDVKTENML 253
C V+EY +GG L +L +R R + ++ L YL S+K +V+RD+K EN++
Sbjct: 86 CFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 143
Query: 254 LDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWE 313
LDK +KI DFG+ + + M GT Y+APEVL + Y R D + G+ ++E
Sbjct: 144 LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 203
Query: 314 IYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+ C +P+ + ++ ++ + +R PR +++ +P +R
Sbjct: 204 MMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 40/278 (14%)
Query: 102 IIKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
++ GTFG V G + G VAVK+L+ R + + +E+
Sbjct: 14 VLGDTLGVGTFGKVKIGEHQLTGHKVAVKILN------RQKIRSLDVVGKIKREIQNLKL 67
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN-RRRKL 218
HP++ K I P++F +V+EY GG L Y+ K+ R ++
Sbjct: 68 FRHPHIIKLYQV---------------ISTPTDFF-MVMEYVSGGELFDYICKHGRVEEM 111
Query: 219 AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDM 278
+ + Q L + Y +VHRD+K EN+LLD KIADFG++ + S+ +
Sbjct: 112 EARRLFQQILS---AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM-MSDGEFL 167
Query: 279 TGETGTLGYMAPEVLNGSAY-NRKCDVYSFGICLWEIYCCDMPYPD----LSFSEVTSAV 333
G+ Y APEV++G Y + D++S G+ L+ + C +P+ D F ++ V
Sbjct: 168 RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV 227
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 371
IP S+A ++ +P KR + ++
Sbjct: 228 FY------IPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY G L Y+ L+ I + G+ + +IVHRD+K +N+L+D
Sbjct: 88 LVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID 145
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET-GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI 314
+T+KI DFG+A+ + T GT+ Y +PE G A + D+YS GI L+E+
Sbjct: 146 SNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEM 205
Query: 315 YCCDMPYP-----DLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+ P+ ++ + +V N+ ++ + P SL+NV+ R + + R
Sbjct: 206 LVGEPPFNGETAVSIAIKHIQDSV--PNVTTDVRKDIPQSLSNVILRATEKDKANR 259
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 5/172 (2%)
Query: 195 CVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK-IVHRDVKTENML 253
C V+EY +GG L +L +R R + ++ L YL S+K +V+RD+K EN++
Sbjct: 85 CFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 142
Query: 254 LDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWE 313
LDK +KI DFG+ + + M GT Y+APEVL + Y R D + G+ ++E
Sbjct: 143 LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 202
Query: 314 IYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+ C +P+ + ++ ++ + +R PR +++ +P +R
Sbjct: 203 MMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 5/172 (2%)
Query: 195 CVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK-IVHRDVKTENML 253
C V+EY +GG L +L +R R + ++ L YL S+K +V+RD+K EN++
Sbjct: 84 CFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 141
Query: 254 LDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWE 313
LDK +KI DFG+ + + M GT Y+APEVL + Y R D + G+ ++E
Sbjct: 142 LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 201
Query: 314 IYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+ C +P+ + ++ ++ + +R PR +++ +P +R
Sbjct: 202 MMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 65/297 (21%)
Query: 108 ARGTFGTVHRGIYDGQDVAVKLLDWGE-ESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
ARG FG V + + VAVK+ + +S ++E E+ SL + H N+
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPG-----------MKHENIL 81
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+FIGA + +++ ++ + G+L +L N +++ + +
Sbjct: 82 QFIGAEKRGTSVDVD------------LWLITAFHEKGSLSDFLKAN---VVSWNELCHI 126
Query: 227 ALDLARGLSYLQSK----------KIVHRDVKTENMLLDKTRTVKIADFGVA-RLEAS-N 274
A +ARGL+YL I HRD+K++N+LL T IADFG+A + EA +
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186
Query: 275 PHDMTGETGTLGYMAPEVLNGSA-YNR----KCDVYSFGICLWEI----YCCDMPYPDL- 324
D G+ GT YMAPEVL G+ + R + D+Y+ G+ LWE+ D P +
Sbjct: 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246
Query: 325 -----------SFSEVTSAVVRQNLRPEI-----PRCCPSSLANVMKRCWDANPDKR 365
S ++ VV + RP + + L ++ CWD + + R
Sbjct: 247 LPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEAR 303
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 31/265 (11%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSE-AEIASLRAAFTQEVAVWHKLDHPNVT 166
G VH R + D +DVAVK+L R++ A S F +E L+HP +
Sbjct: 23 GGMSEVHLARDLRDHRDVAVKVL-------RADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSN-FCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
D G P+ +V+EY G L+ I + + K I+
Sbjct: 76 AVY-------------DTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIE 120
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL 285
+ D + L++ I+HRDVK N+L+ T VK+ DFG+AR A + + + +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVI 180
Query: 286 G---YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 342
G Y++PE G + + + DVYS G L+E+ + P+ S V VR++ P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
Query: 343 PR--CCPSSLANVMKRCWDANPDKR 365
R + L V+ + NP+ R
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 137/321 (42%), Gaps = 78/321 (24%)
Query: 96 IDPAKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVA 155
+D L + RG +G V++G D + VAVK+ + R F E
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN------------RQNFINEKN 57
Query: 156 VWHK--LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN 213
++ ++H N+ +FI +G + T +G + +V+EY G+L YL +
Sbjct: 58 IYRVPLMEHDNIARFI---VGDERV---TADGRMEY-----LLVMEYYPNGSLXKYLSLH 106
Query: 214 RRRKLAFKVVIQLALDLARGLSYLQSK---------KIVHRDVKTENMLLDKTRTVKIAD 264
++ +LA + RGL+YL ++ I HRD+ + N+L+ T I+D
Sbjct: 107 TSDWVS---SCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163
Query: 265 FGVA------RLEASNPHD--MTGETGTLGYMAPEVLNGSAYNR-------KCDVYSFGI 309
FG++ RL D E GT+ YMAPEVL G+ R + D+Y+ G+
Sbjct: 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGL 223
Query: 310 CLWEIY--CCDMPYPDLS-----------------FSEVTSAVVRQNLRPEIPRC----- 345
WEI+ C D+ +P S F ++ V R+ RP+ P
Sbjct: 224 IYWEIFMRCTDL-FPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENS 282
Query: 346 -CPSSLANVMKRCWDANPDKR 365
SL ++ CWD + + R
Sbjct: 283 LAVRSLKETIEDCWDQDAEAR 303
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 135/315 (42%), Gaps = 74/315 (23%)
Query: 103 IKGAFARGTFGTVHRGIYDGQDV--AVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+KGA +G++G V I + A+K+++ + + ++ ++ EV + KL
Sbjct: 30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT----EVRLMKKL 85
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL---------- 210
HPN+ + + D +I C+V+E CHGG L L
Sbjct: 86 HHPNIARL---------YEVYEDEQYI-------CLVMELCHGGHLLDKLNVFIDDSTGK 129
Query: 211 ------------------------IKNRRRKLAF----KVVIQLALDLARGLSYLQSKKI 242
I R L F K++ + + L YL ++ I
Sbjct: 130 CAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGI 189
Query: 243 VHRDVKTENMLL--DKTRTVKIADFGVA----RLEASNPHDMTGETGTLGYMAPEVLNGS 296
HRD+K EN L +K+ +K+ DFG++ +L + MT + GT ++APEVLN +
Sbjct: 190 CHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT 249
Query: 297 --AYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSS----- 349
+Y KCD +S G+ L + +P+P ++ ++ S V+ + L E P S
Sbjct: 250 NESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARD 309
Query: 350 -LANVMKRCWDANPD 363
L+N++ R D D
Sbjct: 310 LLSNLLNRNVDERFD 324
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 105 GAFARGTFGTV--HRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK--- 159
+G FG V R D + A+K + EE + L A+ + V +
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK---NRRR 216
L+ N K + A S L IQ +EYC G L + N++R
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQ----------------MEYCENGTLYDLIHSENLNQQR 115
Query: 217 KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA-------- 268
+++ Q+ LSY+ S+ I+HRD+K N+ +D++R VKI DFG+A
Sbjct: 116 DEYWRLFRQIL----EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 269 --RLEASN----PHDMTGETGTLGYMAPEVLNGSA-YNRKCDVYSFGICLWEIYCCDMPY 321
+L++ N ++T GT Y+A EVL+G+ YN K D+YS GI +E M Y
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE-----MIY 226
Query: 322 PDLSFSEVTSAV-VRQNLRPEIPRCCPSSLANVMK-------RCWDANPDKRP 366
P FS V + + LR P N MK D +P+KRP
Sbjct: 227 P---FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 65/313 (20%)
Query: 108 ARGTFGTVHRGIYDGQDVAVKLLDW-GEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G +G V RG++ G+ VAVK+ E+S E EI + L H N+
Sbjct: 17 GKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVL-----------LRHDNIL 65
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
FI + M + + Q ++ Y G+L +L +R+ L + ++L
Sbjct: 66 GFIASDMTSRNSSTQ------------LWLITHYHEHGSLYDFL---QRQTLEPHLALRL 110
Query: 227 ALDLARGLSYLQSK--------KIVHRDVKTENMLLDKTRTVKIADFGVARL--EASNPH 276
A+ A GL++L + I HRD K+ N+L+ IAD G+A + + S+
Sbjct: 111 AVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYL 170
Query: 277 DMTG--ETGTLGYMAPEVLNGSAYN------RKCDVYSFGICLWEIY------------- 315
D+ GT YMAPEVL+ + D+++FG+ LWEI
Sbjct: 171 DIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYR 230
Query: 316 --CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCP-----SSLANVMKRCWDANPDKRPEM 368
D+ D SF ++ V P IP S LA +M+ CW NP R
Sbjct: 231 PPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTA 290
Query: 369 DEVVAMLEAIDTS 381
+ L+ I S
Sbjct: 291 LRIKKTLQKISNS 303
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 109/236 (46%), Gaps = 42/236 (17%)
Query: 101 LIIKGAFA----------RGTFGTVHR--GIYDGQDVAVKLLDWGEESHRSEAEIASLRA 148
L +G FA +G+FG V + Q+ AVK+++ ++ + I
Sbjct: 14 LYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL---- 69
Query: 149 AFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKS 208
+EV + KLDHPN+ K I S+ +V E GG L
Sbjct: 70 ---REVELLKKLDHPNIMKLF----------------EILEDSSSFYIVGELYTGGELFD 110
Query: 209 YLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT---VKIADF 265
+IK R++ + ++ + G++Y+ IVHRD+K EN+LL+ +KI DF
Sbjct: 111 EIIK--RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDF 168
Query: 266 GVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
G++ N M GT Y+APEVL G+ Y+ KCDV+S G+ L+ + P+
Sbjct: 169 GLSTCFQQNTK-MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 67 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GLS+ S +++HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 110 FQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 170 RAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 41/268 (15%)
Query: 110 GTFGTVHRGIYDGQDV--AVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
G FG V++ V A K++D +SE E+ + E+ + DHPN+ K
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVID-----TKSEEELED----YMVEIDILASCDHPNIVK 71
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR--RKLAFKVVIQ 225
+ A + L +++E+C GGA+ + +++ R + +VV +
Sbjct: 72 LLDAFYYENNL----------------WILIEFCAGGAVDAVMLELERPLTESQIQVVCK 115
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV-ARLEASNPHDMTGETGT 284
LD L+YL KI+HRD+K N+L +K+ADFGV A+ + GT
Sbjct: 116 QTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGT 172
Query: 285 LGYMAPEVL-----NGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 339
+MAPEV+ Y+ K DV+S GI L E+ + P+ +L+ V + +
Sbjct: 173 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE-P 231
Query: 340 PEI--PRCCPSSLANVMKRCWDANPDKR 365
P + P S+ + +K+C + N D R
Sbjct: 232 PTLAQPSRWSSNFKDFLKKCLEKNVDAR 259
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 53/284 (18%)
Query: 102 IIKGAFARGTFGTVHRGIY--DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
II+ G+FG V + Q VA+K + R + + + +E++
Sbjct: 12 IIRETLGEGSFGKVKLATHYKTQQKVALKFIS------RQLLKKSDMHMRVEREISYLKL 65
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR---- 215
L HP++ K I P++ +V+EY GG L Y+++ +R
Sbjct: 66 LRHPHIIKLYDV---------------ITTPTDIV-MVIEYA-GGELFDYIVEKKRMTED 108
Query: 216 --RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEAS 273
R+ +++ + Y KIVHRD+K EN+LLD VKIADFG++ + +
Sbjct: 109 EGRRFFQQIIC--------AIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNI-MT 159
Query: 274 NPHDMTGETGTLGYMAPEVLNGSAY-NRKCDVYSFGICLWEIYCCDMPY-----PDLSFS 327
+ + + G+ Y APEV+NG Y + DV+S GI L+ + +P+ P+L F
Sbjct: 160 DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-FK 218
Query: 328 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 371
+V S V +P ++++R A+P +R + E+
Sbjct: 219 KVNSCVYV------MPDFLSPGAQSLIRRMIVADPMQRITIQEI 256
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 26/270 (9%)
Query: 103 IKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDH 162
I +G FG V Y ++ K + + +++ E A + +EV + L H
Sbjct: 16 IGRPLGKGKFGNV----YLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 163 PNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKV 222
PN+ + G + + + ++EY G + L K R +
Sbjct: 72 PNILRLYGYFHDATRVYL----------------ILEYAPLGTVYRELQKLSR--FDEQR 113
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET 282
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ D
Sbjct: 114 TATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTL--C 171
Query: 283 GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 342
GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEF--TF 229
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P +++ R N +R + EV+
Sbjct: 230 PDFVTEGARDLISRLLKHNASQRLTLAEVL 259
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 35/268 (13%)
Query: 106 AFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
+G+FG V + GQ+ AVK++ + +++ E + +EV + +LDHP
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHP 86
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
N+ K D G+ +V E GG L +I R++ +
Sbjct: 87 NIXKL---------YEFFEDKGYF-------YLVGEVYTGGELFDEIIS--RKRFSEVDA 128
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFGVA-RLEASNPHDMT 279
++ + G++Y KIVHRD+K EN+LL+ K ++I DFG++ EAS
Sbjct: 129 ARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--XK 186
Query: 280 GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 339
+ GT Y+APEVL+G+ Y+ KCDV+S G+ L+ + P+ + ++ V +
Sbjct: 187 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 245
Query: 340 PEIP--RCCPSSLANVMKRCWDANPDKR 365
E+P + S +++++ P R
Sbjct: 246 FELPQWKKVSESAKDLIRKXLTYVPSXR 273
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 18 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 71 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 113
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 173
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 174 RAPEILLG------CKYYSTAVDIWSLGCI 197
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
++R +E+ V H+ + P + F GA E++I +E+ GG
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI----------------CMEHMDGG 89
Query: 205 ALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSK-KIVHRDVKTENMLLDKTRTVKIA 263
+L L K R + +++ ++++ + +GL+YL+ K KI+HRDVK N+L++ +K+
Sbjct: 90 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 147
Query: 264 DFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY- 321
DFGV+ +L S + GT YM+PE L G+ Y+ + D++S G+ L E+ P
Sbjct: 148 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 204
Query: 322 ---------PDLSFSEVTSAVVRQNLRPEIPRCCPS-SLANVMKRCWDANPDKRPEMDEV 371
P ++ E+ +V + P++P S + + +C NP +R ++ ++
Sbjct: 205 PPDAKEDSRPPMAIFELLDYIVNEP-PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 263
Query: 372 VA 373
+
Sbjct: 264 MV 265
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK+++ + + ++
Sbjct: 66 LLDV--------IHTENK--------LYLVFEHVHQD-LKTFMDASALTGIPLPLIKSYL 108
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 169 RAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 68 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 110
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 170
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 171 RAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 21 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 74 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 116
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 176
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 177 RAPEILLG------CKYYSTAVDIWSLGCI 200
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 119/236 (50%), Gaps = 29/236 (12%)
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
++R +E+ V H+ + P + F GA E++I +E+ GG
Sbjct: 65 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI----------------CMEHMDGG 108
Query: 205 ALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSK-KIVHRDVKTENMLLDKTRTVKIA 263
+L L K R + +++ ++++ + +GL+YL+ K KI+HRDVK N+L++ +K+
Sbjct: 109 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 166
Query: 264 DFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY- 321
DFGV+ +L S + GT YM+PE L G+ Y+ + D++S G+ L E+ P
Sbjct: 167 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIG 223
Query: 322 ---PDLSFSEVTSAVVRQNLRPEIPRCCPS-SLANVMKRCWDANPDKRPEMDEVVA 373
++ E+ +V + P++P S + + +C NP +R ++ +++
Sbjct: 224 SGSGSMAIFELLDYIVNEP-PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 278
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 66 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 108
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 169 RAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 67 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 170 RAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 66 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 108
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 169 RAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 67 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 170 RAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 21 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 74 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 116
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 176
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G Y YS + +W + C
Sbjct: 177 RAPEILLGXKY------YSTAVDIWSLGCI 200
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 42/236 (17%)
Query: 101 LIIKGAFA----------RGTFGTVHR--GIYDGQDVAVKLLDWGEESHRSEAEIASLRA 148
L +G FA +G+FG V + Q+ AVK+++ ++ + I
Sbjct: 14 LYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL---- 69
Query: 149 AFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKS 208
+EV + KLDHPN+ K +S I V E GG L
Sbjct: 70 ---REVELLKKLDHPNIMKLFEILEDSSSFYI----------------VGELYTGGELFD 110
Query: 209 YLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLL---DKTRTVKIADF 265
+IK R++ + ++ + G++Y+ IVHRD+K EN+LL +K +KI DF
Sbjct: 111 EIIK--RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDF 168
Query: 266 GVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
G++ N M GT Y+APEVL G+ Y+ KCDV+S G+ L+ + P+
Sbjct: 169 GLSTCFQQNTK-MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 67 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G Y YS + +W + C
Sbjct: 170 RAPEILLGXKY------YSTAVDIWSLGCI 193
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 42/236 (17%)
Query: 101 LIIKGAFA----------RGTFGTVHR--GIYDGQDVAVKLLDWGEESHRSEAEIASLRA 148
L +G FA +G+FG V + Q+ AVK+++ ++ + I
Sbjct: 14 LYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL---- 69
Query: 149 AFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKS 208
+EV + KLDHPN+ K +S I V E GG L
Sbjct: 70 ---REVELLKKLDHPNIMKLFEILEDSSSFYI----------------VGELYTGGELFD 110
Query: 209 YLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLL---DKTRTVKIADF 265
+IK R++ + ++ + G++Y+ IVHRD+K EN+LL +K +KI DF
Sbjct: 111 EIIK--RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDF 168
Query: 266 GVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
G++ N M GT Y+APEVL G+ Y+ KCDV+S G+ L+ + P+
Sbjct: 169 GLSTCFQQNTK-MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 31/265 (11%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSE-AEIASLRAAFTQEVAVWHKLDHPNVT 166
G VH R + +DVAVK+L R++ A S F +E L+HP +
Sbjct: 23 GGMSEVHLARDLRLHRDVAVKVL-------RADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSN-FCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
D G P+ +V+EY G L+ I + + K I+
Sbjct: 76 AVY-------------DTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIE 120
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL 285
+ D + L++ I+HRDVK N+++ T VK+ DFG+AR A + + +T +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 286 G---YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 342
G Y++PE G + + + DVYS G L+E+ + P+ S V VR++ P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
Query: 343 PR--CCPSSLANVMKRCWDANPDKR 365
R + L V+ + NP+ R
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENR 265
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 69 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 111
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K EN+L++ +K+ADFG+AR E TL Y
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 172 RAPEILLG------CKYYSTAVDIWSLGCI 195
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 111/250 (44%), Gaps = 29/250 (11%)
Query: 123 QDVAVKLLDWGEESHRSE-AEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQ 181
+DVAVK+L R++ A S F +E L+HP +
Sbjct: 55 RDVAVKVL-------RADLARDPSFYLRFRREAQNAAALNHPAIVAVY------------ 95
Query: 182 TDNGHIGMPSN-FCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSK 240
D G P+ +V+EY G L+ I + + K I++ D + L++
Sbjct: 96 -DTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQALNFSHQN 152
Query: 241 KIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG---YMAPEVLNGSA 297
I+HRDVK N+++ T VK+ DFG+AR A + + +T +G Y++PE G +
Sbjct: 153 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 212
Query: 298 YNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPR--CCPSSLANVMK 355
+ + DVYS G L+E+ + P+ S V VR++ P R + L V+
Sbjct: 213 VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVL 272
Query: 356 RCWDANPDKR 365
+ NP+ R
Sbjct: 273 KALAKNPENR 282
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 13/178 (7%)
Query: 197 VVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
V+EY +GG L ++ R+RKL + + +++ L+YL + I++RD+K +N+LLD
Sbjct: 131 VIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS 188
Query: 257 TRTVKIADFGVARLEASNPHDMTGET-GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
+K+ D+G+ + E P D T GT Y+APE+L G Y D ++ G+ ++E+
Sbjct: 189 EGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 247
Query: 316 CCDMPY--------PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
P+ PD + + V+ + + IPR A+V+K + +P +R
Sbjct: 248 AGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKER 304
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 13/178 (7%)
Query: 197 VVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
V+EY +GG L ++ R+RKL + + +++ L+YL + I++RD+K +N+LLD
Sbjct: 88 VIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS 145
Query: 257 TRTVKIADFGVARLEASNPHDMTGET-GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
+K+ D+G+ + E P D T GT Y+APE+L G Y D ++ G+ ++E+
Sbjct: 146 EGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 204
Query: 316 CCDMPY--------PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
P+ PD + + V+ + + IPR A+V+K + +P +R
Sbjct: 205 AGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKER 261
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 68 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 110
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K EN+L++ +K+ADFG+AR E TL Y
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 171 RAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 113/266 (42%), Gaps = 26/266 (9%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
+G FG V Y ++ K + + +++ E A + +EV + L HPN+
Sbjct: 20 LGKGKFGNV----YLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNIL 75
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
+ G + + + ++EY G + L K R +
Sbjct: 76 RLYGYFHDATRVYL----------------ILEYAPLGTVYRELQKLSR--FDEQRTATY 117
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
+LA LSY SK+++HRD+K EN+LL +KIADFG + S+ T GTL
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS--RRTTLCGTLD 175
Query: 287 YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCC 346
Y+ PE++ G ++ K D++S G+ +E P+ ++ E + R P
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEF--TFPDFV 233
Query: 347 PSSLANVMKRCWDANPDKRPEMDEVV 372
+++ R N +R + EV+
Sbjct: 234 TEGARDLISRLLKHNASQRLTLAEVL 259
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 13/178 (7%)
Query: 197 VVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
V+EY +GG L ++ R+RKL + + +++ L+YL + I++RD+K +N+LLD
Sbjct: 84 VIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS 141
Query: 257 TRTVKIADFGVARLEASNPHDMTGET-GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
+K+ D+G+ + E P D T GT Y+APE+L G Y D ++ G+ ++E+
Sbjct: 142 EGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 200
Query: 316 CCDMPY--------PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
P+ PD + + V+ + + IPR A+V+K + +P +R
Sbjct: 201 AGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKER 257
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 67 LLDV--------IHTENK--------LYLVFEFLHQD-LKDFMDASALTGIPLPLIKSYL 109
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K EN+L++ +K+ADFG+AR E TL Y
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 170 RAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 22/224 (9%)
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
QE+A+ KLDHPNV K + E+ + H+ M V E + G +
Sbjct: 85 QEIAILKKLDHPNVVKLV-------EVLDDPNEDHLYM-------VFELVNQGPVMEVPT 130
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
+ + Q DL +G+ YL +KI+HRD+K N+L+ + +KIADFGV+
Sbjct: 131 LKPLSEDQARFYFQ---DLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 272 ASNPHDMTGETGTLGYMAPEVLNGS---AYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 328
+ ++ GT +MAPE L+ + + DV++ G+ L+ P+ D
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247
Query: 329 VTSAVVRQNLR-PEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 371
+ S + Q L P+ P L +++ R D NP+ R + E+
Sbjct: 248 LHSKIKSQALEFPDQPDIA-EDLKDLITRMLDKNPESRIVVPEI 290
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 107 FARGTFGTVHRG--IYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
+G GTV+ + GQ+VA++ ++ ++ + E+ V + +PN
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE---------LIINEILVMRENKNPN 78
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ ++ + + EL VV+EY GG+L + + + V
Sbjct: 79 IVNYLDSYLVGDEL----------------WVVMEYLAGGSLTDVVTETCMDEGQIAAVC 122
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ L + L +L S +++HRD+K++N+LL +VK+ DFG + GT
Sbjct: 123 RECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 179
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVRQNLRPEI- 342
+MAPEV+ AY K D++S GI E+ + PY L+ + + + ++ N PE+
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIATNGTPELQ 237
Query: 343 -PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P + + + RC D + +KR E++
Sbjct: 238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELL 268
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 13/178 (7%)
Query: 197 VVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
V+EY +GG L ++ R+RKL + + +++ L+YL + I++RD+K +N+LLD
Sbjct: 99 VIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS 156
Query: 257 TRTVKIADFGVARLEASNPHDMTGET-GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
+K+ D+G+ + E P D T GT Y+APE+L G Y D ++ G+ ++E+
Sbjct: 157 EGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 215
Query: 316 CCDMPY--------PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
P+ PD + + V+ + + IPR A+V+K + +P +R
Sbjct: 216 AGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSMSVKAASVLKSFLNKDPKER 272
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 107 FARGTFGTVHRG--IYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
+G GTV+ + GQ+VA++ ++ ++ + E+ V + +PN
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE---------LIINEILVMRENKNPN 78
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ ++ + + EL VV+EY GG+L + + + V
Sbjct: 79 IVNYLDSYLVGDEL----------------WVVMEYLAGGSLTDVVTETCMDEGQIAAVC 122
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ L + L +L S +++HRD+K++N+LL +VK+ DFG + GT
Sbjct: 123 RECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGT 179
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVRQNLRPEI- 342
+MAPEV+ AY K D++S GI E+ + PY L+ + + + ++ N PE+
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIATNGTPELQ 237
Query: 343 -PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P + + + RC D + +KR E++
Sbjct: 238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELL 268
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK+++ + + ++
Sbjct: 70 LLDV--------IHTENK--------LYLVFEFLHQD-LKTFMDASALTGIPLPLIKSYL 112
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 173 RAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 96/180 (53%), Gaps = 23/180 (12%)
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
++R +E+ V H+ + P + F GA E++I +E+ GG
Sbjct: 56 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI----------------CMEHMDGG 99
Query: 205 ALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSK-KIVHRDVKTENMLLDKTRTVKIA 263
+L L + +R + +++ ++++ + RGL+YL+ K +I+HRDVK N+L++ +K+
Sbjct: 100 SLDQVLKEAKR--IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLC 157
Query: 264 DFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
DFGV+ +L S + G T YMAPE L G+ Y+ + D++S G+ L E+ P P
Sbjct: 158 DFGVSGQLIDSMANSFVG---TRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIP 214
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 103 IKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+K G FG V R I+ G+ VA+K R E + R + E+ + KL
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGEQVAIK-------QCRQELSPKN-RERWCLEIQIMKKL 69
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRK--- 217
+HPNV G +L P++ + +EYC GG L+ YL N+
Sbjct: 70 NHPNVVSAREVPDGLQKL----------APNDLPLLAMEYCEGGDLRKYL--NQFENCCG 117
Query: 218 LAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD--KTRTV-KIADFGVARLEASN 274
L + L D++ L YL +I+HRD+K EN++L R + KI D G A+ E
Sbjct: 118 LKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK-ELDQ 176
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
T GTL Y+APE+L Y D +SFG +E P+
Sbjct: 177 GELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 103 IKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+K G FG V R I+ G+ VA+K R E + R + E+ + KL
Sbjct: 19 MKERLGTGGFGYVLRWIHQDTGEQVAIK-------QCRQELSPKN-RERWCLEIQIMKKL 70
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRK--- 217
+HPNV G +L P++ + +EYC GG L+ YL N+
Sbjct: 71 NHPNVVSAREVPDGLQKL----------APNDLPLLAMEYCEGGDLRKYL--NQFENCCG 118
Query: 218 LAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD--KTRTV-KIADFGVARLEASN 274
L + L D++ L YL +I+HRD+K EN++L R + KI D G A+ E
Sbjct: 119 LKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK-ELDQ 177
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
T GTL Y+APE+L Y D +SFG +E P+
Sbjct: 178 GELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 29/264 (10%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSE-AEIASLRAAFTQEVAVWHKLDHPNVT 166
G VH R + +DVAVK+L R++ A S F +E L+HP +
Sbjct: 23 GGMSEVHLARDLRLHRDVAVKVL-------RADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
A T E +T G + +V+EY G L+ I + + K I++
Sbjct: 76 ----AVYATGE--AETPAGPL------PYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEV 121
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
D + L++ I+HRDVK N+++ T VK+ DFG+AR A + + +T +G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 287 ---YMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 343
Y++PE G + + + DVYS G L+E+ + P+ S V VR++ P
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 241
Query: 344 R--CCPSSLANVMKRCWDANPDKR 365
R + L V+ + NP+ R
Sbjct: 242 RHEGLSADLDAVVLKALAKNPENR 265
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 28/270 (10%)
Query: 108 ARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
RG+F TV++G+ V V W E R + S R F +E L HPN+ +
Sbjct: 35 GRGSFKTVYKGLDTETTVEVA---WCELQDRKLTK--SERQRFKEEAEXLKGLQHPNIVR 89
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVV-EYCHGGALKSYLIKNRRRKLAFKVVIQL 226
F D+ + C V+V E G LK+YL + + K+ KV+
Sbjct: 90 FY-------------DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKI--KVLRSW 134
Query: 227 ALDLARGLSYLQSKK--IVHRDVKTENMLLD-KTRTVKIADFGVARLEASNPHDMTGETG 283
+ +GL +L ++ I+HRD+K +N+ + T +VKI D G+A L+ ++ G
Sbjct: 135 CRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV--IG 192
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRP-EI 342
T + APE Y+ DVY+FG C E + PY + + V ++P
Sbjct: 193 TPEFXAPEXYE-EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASF 251
Query: 343 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+ + +++ C N D+R + +++
Sbjct: 252 DKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 69 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 111
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 172 RAPEILLG------CKYYSTAVDIWSLGCI 195
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 70 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 112
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 173 RAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 69 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 111
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 172 RAPEILLG------CKYYSTAVDIWSLGCI 195
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 33/292 (11%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGIY--DGQDVAVKLLDWGEESHRSEAEIASLRAA 149
Q W+ L G RG +G+V++ ++ GQ +AVK + RS + +
Sbjct: 15 QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI-------RSTVDEKEQKQL 67
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
V D P + +F GA + I C+ + Y
Sbjct: 68 LMDLDVVMRSSDCPYIVQFYGALFREGDCWI--------------CMELMSTSFDKFYKY 113
Query: 210 LIKNRRRKLAFKVVIQLALDLARGLSYLQSK-KIVHRDVKTENMLLDKTRTVKIADFGVA 268
+ + +++ ++ L + L++L+ KI+HRD+K N+LLD++ +K+ DFG++
Sbjct: 114 VYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
Query: 269 RLEASNPHDMTGETGTLGYMAPEVLNGSA----YNRKCDVYSFGICLWEIYCCDMPYPDL 324
+ + T + G YMAPE ++ SA Y+ + DV+S GI L+E+ PYP
Sbjct: 174 G-QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW 232
Query: 325 S--FSEVTSAVVRQ--NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
+ F ++T V L R S N + C + KRP+ E++
Sbjct: 233 NSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 197 VVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
V+EY +GG L ++ + R K V A ++A GL +LQSK I++RD+K +N++LD
Sbjct: 99 VMEYVNGGDLMYHIQQVGRFKEPHAVF--YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS 156
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
+KIADFG+ + + GT Y+APE++ Y + D ++FG+ L+E+
Sbjct: 157 EGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 216
Query: 317 CDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
P+ E+ +++ N+ P+ + K +P KR
Sbjct: 217 GQAPFEGEDEDELFQSIMEHNV--AYPKSMSKEAVAICKGLMTKHPGKR 263
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 125/293 (42%), Gaps = 59/293 (20%)
Query: 105 GAFARGTFGTV--HRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK--- 159
+G FG V R D + A+K + EE + L A+ + V +
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK---NRRR 216
L+ N K + A S L IQ +EYC L + N++R
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQ----------------MEYCENRTLYDLIHSENLNQQR 115
Query: 217 KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA-------- 268
+++ Q+ LSY+ S+ I+HRD+K N+ +D++R VKI DFG+A
Sbjct: 116 DEYWRLFRQIL----EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 269 --RLEASN----PHDMTGETGTLGYMAPEVLNGSA-YNRKCDVYSFGICLWEIYCCDMPY 321
+L++ N ++T GT Y+A EVL+G+ YN K D+YS GI +E M Y
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE-----MIY 226
Query: 322 PDLSFSEVTSAV-VRQNLRPEIPRCCPSSLANVMK-------RCWDANPDKRP 366
P FS V + + LR P N MK D +P+KRP
Sbjct: 227 P---FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 67 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 170 RAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+ + R + E + + +E+++ +L+HPN+ K
Sbjct: 14 GTYGVVYKARNKLTGEVVALXKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 67 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 170 RAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+ + R + E + + +E+++ +L+HPN+ K
Sbjct: 13 GTYGVVYKARNKLTGEVVALXKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 66 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 108
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 169 RAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 70 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 112
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 173 RAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 67 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 170 RAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 66 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 108
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 168
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 169 RAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 129/297 (43%), Gaps = 46/297 (15%)
Query: 107 FARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
RG FG V + D + A+K + E+A R +EV KL+HP
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRL------PNRELA--REKVMREVKALAKLEHPG 64
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL-----IKNRRRKLA 219
+ ++ A + + T+ P + + ++ C LK ++ I+ R R +
Sbjct: 65 IVRYFNAWLEKN----TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMT 279
+ +Q+A + +L SK ++HRD+K N+ VK+ DFG+ + + T
Sbjct: 121 LHIFLQIA----EAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 280 ------------GETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYP-DLSF 326
G+ GT YM+PE ++G++Y+ K D++S G+ L+E+ YP
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL-----YPFSTQM 231
Query: 327 SEVTSAVVRQNLR--PEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV--AMLEAID 379
V + +NL+ P + P V + +P +RPE ++ A+ E +D
Sbjct: 232 ERVRTLTDVRNLKFPPLFTQKYPCEYVMV-QDMLSPSPMERPEAINIIENAVFEDLD 287
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 18 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 71 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 113
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 173
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 174 RAPEILLG------CKYYSTAVDIWSLGCI 197
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 66 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 108
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 168
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 169 RAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
V+EY +GG L ++ + R K V A ++A GL +LQSK I++RD+K +N++LD
Sbjct: 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVF--YAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
+KIADFG+ + + GT Y+APE++ Y + D ++FG+ L+E+
Sbjct: 477 SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 536
Query: 316 CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
P+ E+ +++ N+ P+ + K +P KR
Sbjct: 537 AGQAPFEGEDEDELFQSIMEHNV--AYPKSMSKEAVAICKGLMTKHPGKR 584
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 67 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 170 RAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 67 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 170 RAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 68 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 110
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 171 RAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ H LK ++ + + ++
Sbjct: 68 LLDV--------IHTENK--------LYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 110
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 171 RAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 107 FARGTFGTVHRG--IYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
+G GTV+ + GQ+VA++ ++ ++ + E+ V + +PN
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE---------LIINEILVMRENKNPN 79
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ ++ + + EL VV+EY GG+L + + + V
Sbjct: 80 IVNYLDSYLVGDEL----------------WVVMEYLAGGSLTDVVTETCMDEGQIAAVC 123
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ L + L +L S +++HRD+K++N+LL +VK+ DFG + GT
Sbjct: 124 RECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGT 180
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVRQNLRPEI- 342
+MAPEV+ AY K D++S GI E+ + PY L+ + + + ++ N PE+
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIATNGTPELQ 238
Query: 343 -PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P + + + RC + + +KR E++
Sbjct: 239 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELI 269
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 23/180 (12%)
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
++R +E+ V H+ + P + F GA E++I +E+ GG
Sbjct: 108 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI----------------CMEHMDGG 151
Query: 205 ALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSK-KIVHRDVKTENMLLDKTRTVKIA 263
+L L K R + +++ ++++ + +GL+YL+ K KI+HRDVK N+L++ +K+
Sbjct: 152 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 209
Query: 264 DFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
DFGV+ +L S + GT YM+PE L G+ Y+ + D++S G+ L E+ P P
Sbjct: 210 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 266
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 112/257 (43%), Gaps = 33/257 (12%)
Query: 122 GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQ 181
G + A+K++ +S S A EVAV +LDHPN+ K
Sbjct: 29 GAERAIKII------KKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE----------- 71
Query: 182 TDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK 241
N+ V+ Y G +++ + ++ V+++ L G +YL
Sbjct: 72 ----FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLHKHN 124
Query: 242 IVHRDVKTENMLLD-KTR--TVKIADFGV-ARLEASNPHDMTGETGTLGYMAPEVLNGSA 297
IVHRD+K EN+LL+ K+R +KI DFG+ A E M GT Y+APEVL
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERLGTAYYIAPEVLR-KK 181
Query: 298 YNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSS--LANVMK 355
Y+ KCDV+S G+ L+ + C P+ + E+ V + + P S ++K
Sbjct: 182 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 241
Query: 356 RCWDANPDKRPEMDEVV 372
P KR +E +
Sbjct: 242 LMLTYEPSKRISAEEAL 258
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 23/180 (12%)
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
++R +E+ V H+ + P + F GA E++I +E+ GG
Sbjct: 73 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI----------------CMEHMDGG 116
Query: 205 ALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSK-KIVHRDVKTENMLLDKTRTVKIA 263
+L L K R + +++ ++++ + +GL+YL+ K KI+HRDVK N+L++ +K+
Sbjct: 117 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 174
Query: 264 DFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
DFGV+ +L S + GT YM+PE L G+ Y+ + D++S G+ L E+ P P
Sbjct: 175 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 231
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 194 CCVVVEYCHGGALKSYLIKNRRRKLAFK---VVIQLALDLARGLSYLQSKKIVHRDVKTE 250
+++++ GG L + L K ++ F V LA +LA GL +L S I++RD+K E
Sbjct: 105 LYLILDFLRGGDLFTRLSK----EVMFTEEDVKFYLA-ELALGLDHLHSLGIIYRDLKPE 159
Query: 251 NMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGIC 310
N+LLD+ +K+ DFG+++ + GT+ YMAPEV+N ++ D +S+G+
Sbjct: 160 NILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVL 219
Query: 311 LWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
++E+ +P+ E + +++ L +P+ + ++++ + NP R
Sbjct: 220 MFEMLTGSLPFQGKDRKETMTLILKAKL--GMPQFLSTEAQSLLRALFKRNPANR 272
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 107 FARGTFGTVHRG--IYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
+G GTV+ + GQ+VA++ ++ ++ + E+ V + +PN
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE---------LIINEILVMRENKNPN 78
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ ++ + + EL VV+EY GG+L + + + V
Sbjct: 79 IVNYLDSYLVGDEL----------------WVVMEYLAGGSLTDVVTETCMDEGQIAAVC 122
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ L + L +L S +++HRD+K++N+LL +VK+ DFG + GT
Sbjct: 123 RECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGT 179
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVRQNLRPEI- 342
+MAPEV+ AY K D++S GI E+ + PY L+ + + + ++ N PE+
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIATNGTPELQ 237
Query: 343 -PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P + + + RC + + +KR E++
Sbjct: 238 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELL 268
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 23/180 (12%)
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
++R +E+ V H+ + P + F GA E++I +E+ GG
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI----------------CMEHMDGG 89
Query: 205 ALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSK-KIVHRDVKTENMLLDKTRTVKIA 263
+L L K R + +++ ++++ + +GL+YL+ K KI+HRDVK N+L++ +K+
Sbjct: 90 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 147
Query: 264 DFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
DFGV+ +L S + GT YM+PE L G+ Y+ + D++S G+ L E+ P P
Sbjct: 148 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 23/180 (12%)
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
++R +E+ V H+ + P + F GA E++I +E+ GG
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI----------------CMEHMDGG 89
Query: 205 ALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSK-KIVHRDVKTENMLLDKTRTVKIA 263
+L L K R + +++ ++++ + +GL+YL+ K KI+HRDVK N+L++ +K+
Sbjct: 90 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 147
Query: 264 DFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
DFGV+ +L S + GT YM+PE L G+ Y+ + D++S G+ L E+ P P
Sbjct: 148 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 23/180 (12%)
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
++R +E+ V H+ + P + F GA E++I +E+ GG
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI----------------CMEHMDGG 89
Query: 205 ALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSK-KIVHRDVKTENMLLDKTRTVKIA 263
+L L K R + +++ ++++ + +GL+YL+ K KI+HRDVK N+L++ +K+
Sbjct: 90 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 147
Query: 264 DFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
DFGV+ +L S + GT YM+PE L G+ Y+ + D++S G+ L E+ P P
Sbjct: 148 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 23/180 (12%)
Query: 145 SLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGG 204
++R +E+ V H+ + P + F GA E++I +E+ GG
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI----------------CMEHMDGG 89
Query: 205 ALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSK-KIVHRDVKTENMLLDKTRTVKIA 263
+L L K R + +++ ++++ + +GL+YL+ K KI+HRDVK N+L++ +K+
Sbjct: 90 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 147
Query: 264 DFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
DFGV+ +L S + GT YM+PE L G+ Y+ + D++S G+ L E+ P P
Sbjct: 148 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 127/277 (45%), Gaps = 38/277 (13%)
Query: 97 DPAKLIIKGAFARGTFGTVH-----RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFT 151
DP++ + +G+FG V G Q A+K+L R +R
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR-----VRTKME 76
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
+++ V +++HP + K A QT+ +++++ GG L + L
Sbjct: 77 RDILV--EVNHPFIVKLHYA--------FQTEGK--------LYLILDFLRGGDLFTRLS 118
Query: 212 KNRRRKLAFK---VVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA 268
K ++ F V LA +LA L +L S I++RD+K EN+LLD+ +K+ DFG++
Sbjct: 119 K----EVMFTEEDVKFYLA-ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Query: 269 RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 328
+ + GT+ YMAPEV+N + + D +SFG+ ++E+ +P+ E
Sbjct: 174 KESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE 233
Query: 329 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+ +++ L +P+ ++++ + NP R
Sbjct: 234 TMTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 127/277 (45%), Gaps = 38/277 (13%)
Query: 97 DPAKLIIKGAFARGTFGTVH-----RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFT 151
DP++ + +G+FG V G Q A+K+L R +R
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR-----VRTKME 76
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
+++ V +++HP + K A QT+ +++++ GG L + L
Sbjct: 77 RDILV--EVNHPFIVKLHYA--------FQTEGK--------LYLILDFLRGGDLFTRLS 118
Query: 212 KNRRRKLAFK---VVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA 268
K ++ F V LA +LA L +L S I++RD+K EN+LLD+ +K+ DFG++
Sbjct: 119 K----EVMFTEEDVKFYLA-ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Query: 269 RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 328
+ + GT+ YMAPEV+N + + D +SFG+ ++E+ +P+ E
Sbjct: 174 KESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE 233
Query: 329 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+ +++ L +P+ ++++ + NP R
Sbjct: 234 TMTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 113/257 (43%), Gaps = 33/257 (12%)
Query: 122 GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQ 181
G + A+K++ +S S A EVAV +LDHPN+ K
Sbjct: 46 GAERAIKII------KKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL---------YEFF 90
Query: 182 TDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK 241
D N+ V+ Y G +++ + ++ V+++ L G +YL
Sbjct: 91 EDK------RNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLHKHN 141
Query: 242 IVHRDVKTENMLLD-KTR--TVKIADFGV-ARLEASNPHDMTGETGTLGYMAPEVLNGSA 297
IVHRD+K EN+LL+ K+R +KI DFG+ A E M GT Y+APEVL
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERLGTAYYIAPEVLR-KK 198
Query: 298 YNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSS--LANVMK 355
Y+ KCDV+S G+ L+ + C P+ + E+ V + + P S ++K
Sbjct: 199 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 258
Query: 356 RCWDANPDKRPEMDEVV 372
P KR +E +
Sbjct: 259 LMLTYEPSKRISAEEAL 275
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 127/277 (45%), Gaps = 38/277 (13%)
Query: 97 DPAKLIIKGAFARGTFGTVH-----RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFT 151
DP++ + +G+FG V G Q A+K+L R +R
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR-----VRTKME 77
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
+++ V +++HP + K A QT+ +++++ GG L + L
Sbjct: 78 RDILV--EVNHPFIVKLHYA--------FQTEGK--------LYLILDFLRGGDLFTRLS 119
Query: 212 KNRRRKLAFK---VVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA 268
K ++ F V LA +LA L +L S I++RD+K EN+LLD+ +K+ DFG++
Sbjct: 120 K----EVMFTEEDVKFYLA-ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
Query: 269 RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 328
+ + GT+ YMAPEV+N + + D +SFG+ ++E+ +P+ E
Sbjct: 175 KESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE 234
Query: 329 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+ +++ L +P+ ++++ + NP R
Sbjct: 235 TMTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 269
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 36/230 (15%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
+ E+AV HK+ HPN+ +I GH+ + +++ GG L
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALD---------DIYESGGHLYL-------IMQLVSGGEL 103
Query: 207 ------KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENML---LDKT 257
K + + +L F+V+ + YL IVHRD+K EN+L LD+
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVL--------DAVKYLHDLGIVHRDLKPENLLYYSLDED 155
Query: 258 RTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
+ I+DFG++++E ++ GT GY+APEVL Y++ D +S G+ + + C
Sbjct: 156 SKIMISDFGLSKMEDPGSV-LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
Query: 318 DMPYPDLSFSEVTSAVVRQNLRPEIPRC--CPSSLANVMKRCWDANPDKR 365
P+ D + +++ +++ + P S + ++ + +P+KR
Sbjct: 215 YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 38/230 (16%)
Query: 148 AAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL- 206
+ E+AV HK+ HPN+ +I GH+ ++++ GG L
Sbjct: 61 GSMENEIAVLHKIKHPNIVALD---------DIYESGGHL-------YLIMQLVSGGELF 104
Query: 207 -----KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENML---LDKTR 258
K + + +L F+V+ + YL IVHRD+K EN+L LD+
Sbjct: 105 DRIVEKGFYTERDASRLIFQVL--------DAVKYLHDLGIVHRDLKPENLLYYSLDEDS 156
Query: 259 TVKIADFGVARLEASNPHD-MTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
+ I+DFG++++E +P ++ GT GY+APEVL Y++ D +S G+ + + C
Sbjct: 157 KIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
Query: 318 DMPYPDLSFSEVTSAVVRQNLRPEIPRC--CPSSLANVMKRCWDANPDKR 365
P+ D + +++ +++ + P S + ++ + +P+KR
Sbjct: 215 YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 34/297 (11%)
Query: 99 AKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWH 158
+ + KG FA+ Y+ D+ K + G+ +S + + E+A+
Sbjct: 31 GRFLGKGGFAK---------CYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 81
Query: 159 KLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKL 218
LD+P+V F G + D+ F VV+E C +L + RR+ +
Sbjct: 82 SLDNPHVVGFHGF--------FEDDD--------FVYVVLEICRRRSLLE--LHKRRKAV 123
Query: 219 AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDM 278
+G+ YL + +++HRD+K N+ L+ VKI DFG+A +
Sbjct: 124 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 183
Query: 279 TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL 338
GT Y+APEVL ++ + D++S G L+ + P+ E T +++N
Sbjct: 184 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE-TYIRIKKN- 241
Query: 339 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMIPVDQPQGC 395
+PR + +++R A+P RP + E++ D G P+ P C
Sbjct: 242 EYSVPRHINPVASALIRRMLHADPTLRPSVAELLT-----DEFFTSGYAPMRLPTSC 293
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 107 FARGTFGTVHRG--IYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
+G GTV+ + GQ+VA++ ++ ++ + E+ V + +PN
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE---------LIINEILVMRENKNPN 79
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ ++ + + EL VV+EY GG+L + + + V
Sbjct: 80 IVNYLDSYLVGDEL----------------WVVMEYLAGGSLTDVVTETCMDEGQIAAVC 123
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
+ L + L +L S +++HR++K++N+LL +VK+ DFG + GT
Sbjct: 124 RECL---QALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 180
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVRQNLRPEI- 342
+MAPEV+ AY K D++S GI E+ + PY L+ + + + ++ N PE+
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIATNGTPELQ 238
Query: 343 -PRCCPSSLANVMKRCWDANPDKRPEMDEVV 372
P + + + RC + + +KR E++
Sbjct: 239 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELI 269
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 143 IASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCH 202
I E+++ LDHPN+ K + + +V E+
Sbjct: 86 IEKFHEEIYNEISLLKSLDHPNIIKLFD----------------VFEDKKYFYLVTEFYE 129
Query: 203 GGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT--- 259
GG L +I R K + + G+ YL IVHRD+K EN+LL+ +
Sbjct: 130 GGELFEQII--NRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLN 187
Query: 260 VKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDM 319
+KI DFG++ S + + GT Y+APEVL YN KCDV+S G+ ++ + C
Sbjct: 188 IKIVDFGLSSF-FSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYP 245
Query: 320 PY 321
P+
Sbjct: 246 PF 247
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 38/230 (16%)
Query: 148 AAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL- 206
+ E+AV HK+ HPN+ +I GH+ + +++ GG L
Sbjct: 61 GSMENEIAVLHKIKHPNIVALD---------DIYESGGHLYL-------IMQLVSGGELF 104
Query: 207 -----KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENML---LDKTR 258
K + + +L F+V+ + YL IVHRD+K EN+L LD+
Sbjct: 105 DRIVEKGFYTERDASRLIFQVL--------DAVKYLHDLGIVHRDLKPENLLYYSLDEDS 156
Query: 259 TVKIADFGVARLEASNPHD-MTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
+ I+DFG++++E +P ++ GT GY+APEVL Y++ D +S G+ + + C
Sbjct: 157 KIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
Query: 318 DMPYPDLSFSEVTSAVVRQNLRPEIPRC--CPSSLANVMKRCWDANPDKR 365
P+ D + +++ +++ + P S + ++ + +P+KR
Sbjct: 215 YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 34/297 (11%)
Query: 99 AKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWH 158
+ + KG FA+ Y+ D+ K + G+ +S + + E+A+
Sbjct: 47 GRFLGKGGFAK---------CYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 159 KLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKL 218
LD+P+V F G + D+ F VV+E C +L + RR+ +
Sbjct: 98 SLDNPHVVGFHGF--------FEDDD--------FVYVVLEICRRRSLLE--LHKRRKAV 139
Query: 219 AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDM 278
+G+ YL + +++HRD+K N+ L+ VKI DFG+A +
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 279 TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL 338
GT Y+APEVL ++ + D++S G L+ + P+ E T +++N
Sbjct: 200 KTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE-TYIRIKKN- 257
Query: 339 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMIPVDQPQGC 395
+PR + +++R A+P RP + E++ D G P+ P C
Sbjct: 258 EYSVPRHINPVASALIRRMLHADPTLRPSVAELLT-----DEFFTSGYAPMRLPTSC 309
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 34/297 (11%)
Query: 99 AKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWH 158
+ + KG FA+ Y+ D+ K + G+ +S + + E+A+
Sbjct: 47 GRFLGKGGFAK---------CYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 159 KLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKL 218
LD+P+V F G + D+ F VV+E C +L + RR+ +
Sbjct: 98 SLDNPHVVGFHGF--------FEDDD--------FVYVVLEICRRRSLLE--LHKRRKAV 139
Query: 219 AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDM 278
+G+ YL + +++HRD+K N+ L+ VKI DFG+A +
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 279 TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL 338
GT Y+APEVL ++ + D++S G L+ + P+ E T +++N
Sbjct: 200 KXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE-TYIRIKKN- 257
Query: 339 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMIPVDQPQGC 395
+PR + +++R A+P RP + E++ D G P+ P C
Sbjct: 258 EYSVPRHINPVASALIRRMLHADPTLRPSVAELLT-----DEFFTSGYAPMRLPTSC 309
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 34/297 (11%)
Query: 99 AKLIIKGAFARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWH 158
+ + KG FA+ Y+ D+ K + G+ +S + + E+A+
Sbjct: 47 GRFLGKGGFAK---------CYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 159 KLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKL 218
LD+P+V F G + D+ F VV+E C +L + RR+ +
Sbjct: 98 SLDNPHVVGFHGF--------FEDDD--------FVYVVLEICRRRSLLE--LHKRRKAV 139
Query: 219 AFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDM 278
+G+ YL + +++HRD+K N+ L+ VKI DFG+A +
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 279 TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL 338
GT Y+APEVL ++ + D++S G L+ + P+ E T +++N
Sbjct: 200 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE-TYIRIKKN- 257
Query: 339 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMIPVDQPQGC 395
+PR + +++R A+P RP + E++ D G P+ P C
Sbjct: 258 EYSVPRHINPVASALIRRMLHADPTLRPSVAELLT-----DEFFTSGYAPMRLPTSC 309
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ LK ++ + + ++
Sbjct: 70 LLDV--------IHTENK--------LYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYL 112
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K EN+L++ +K+ADFG+AR E TL Y
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 173 RAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 38/230 (16%)
Query: 148 AAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL- 206
+ E+AV HK+ HPN+ +I GH+ + +++ GG L
Sbjct: 61 GSMENEIAVLHKIKHPNIVALD---------DIYESGGHLYL-------IMQLVSGGELF 104
Query: 207 -----KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENML---LDKTR 258
K + + +L F+V+ + YL IVHRD+K EN+L LD+
Sbjct: 105 DRIVEKGFYTERDASRLIFQVL--------DAVKYLHDLGIVHRDLKPENLLYYSLDEDS 156
Query: 259 TVKIADFGVARLEASNPHD-MTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
+ I+DFG++++E +P ++ GT GY+APEVL Y++ D +S G+ + + C
Sbjct: 157 KIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
Query: 318 DMPYPDLSFSEVTSAVVRQNLRPEIPRC--CPSSLANVMKRCWDANPDKR 365
P+ D + +++ +++ + P S + ++ + +P+KR
Sbjct: 215 YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 28/221 (12%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
GT+ TV++G+ V V L + +S A +E+++ +L H N+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTA------IREISLMKELKHENIV 66
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL----IKNRRRKLAFKV 222
+ I T+N +V E+ LK Y+ + N R L +
Sbjct: 67 RLYDV--------IHTENK--------LTLVFEFMDND-LKKYMDSRTVGNTPRGLELNL 109
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET 282
V L +GL++ KI+HRD+K +N+L++K +K+ DFG+AR + + E
Sbjct: 110 VKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV 169
Query: 283 GTLGYMAPEVLNGS-AYNRKCDVYSFGICLWEIYCCDMPYP 322
TL Y AP+VL GS Y+ D++S G L E+ +P
Sbjct: 170 VTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFP 210
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 124/282 (43%), Gaps = 46/282 (16%)
Query: 97 DPAKLIIK-GAFARGTFGTVH--RGIYDGQDVAVKLLDW-GEESHRSEAEIASLRAAFTQ 152
DP KL G+FG V+ R + + + VA+K + + G++S+ +I +
Sbjct: 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-------IK 103
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV KL HPN ++ G + + +V+EYC G A S L++
Sbjct: 104 EVRFLQKLRHPNTIQYRGCYLR----------------EHTAWLVMEYCLGSA--SDLLE 145
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
++ L + + +GL+YL S ++HRDVK N+LL + VK+ DFG A + A
Sbjct: 146 VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205
Query: 273 SNPHDMTGETGTLGYMAPEV---LNGSAYNRKCDVYSFGICLWEIYCCDMP--YPDLSFS 327
GT +MAPEV ++ Y+ K DV+S GI C ++ P L
Sbjct: 206 P----ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT-----CIELAERKPPLFNM 256
Query: 328 EVTSAV--VRQNLRPEIPRCCPSS-LANVMKRCWDANPDKRP 366
SA+ + QN P + S N + C P RP
Sbjct: 257 NAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRP 298
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ LK ++ + + ++
Sbjct: 68 LLDV--------IHTENK--------LYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYL 110
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K EN+L++ +K+ADFG+AR E TL Y
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 171 RAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 124/282 (43%), Gaps = 46/282 (16%)
Query: 97 DPAKLIIK-GAFARGTFGTVH--RGIYDGQDVAVKLLDW-GEESHRSEAEIASLRAAFTQ 152
DP KL G+FG V+ R + + + VA+K + + G++S+ +I +
Sbjct: 12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-------IK 64
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
EV KL HPN ++ G + + +V+EYC G A S L++
Sbjct: 65 EVRFLQKLRHPNTIQYRGCYLR----------------EHTAWLVMEYCLGSA--SDLLE 106
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
++ L + + +GL+YL S ++HRDVK N+LL + VK+ DFG A + A
Sbjct: 107 VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166
Query: 273 SNPHDMTGETGTLGYMAPEV---LNGSAYNRKCDVYSFGICLWEIYCCDMP--YPDLSFS 327
GT +MAPEV ++ Y+ K DV+S GI C ++ P L
Sbjct: 167 P----ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT-----CIELAERKPPLFNM 217
Query: 328 EVTSAV--VRQNLRPEIPRCCPSS-LANVMKRCWDANPDKRP 366
SA+ + QN P + S N + C P RP
Sbjct: 218 NAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRP 259
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 36/238 (15%)
Query: 97 DPAKLI-IKGAFARGTFGTVHRG--IYDGQDVAVKLLD-WGEESHRSEAEIASLRAAFTQ 152
DPA + + GT+G V++G + GQ A+K++D G+E + EI L+
Sbjct: 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS-- 78
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
H N+ + GA + + GM +V+E+C G++ +
Sbjct: 79 --------HHRNIATYYGAFIKKNP---------PGMDDQLW-LVMEFCGAGSVTDLIKN 120
Query: 213 NRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV-ARLE 271
+ L + + + ++ RGLS+L K++HRD+K +N+LL + VK+ DFGV A+L+
Sbjct: 121 TKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180
Query: 272 ASNPHDMTGETGTLGYMAPEVLN-----GSAYNRKCDVYSFGICLWEIY-----CCDM 319
+ T GT +MAPEV+ + Y+ K D++S GI E+ CDM
Sbjct: 181 RTVGRRNTF-IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ LK ++ + + ++
Sbjct: 70 LLDV--------IHTENK--------LYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYL 112
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 173 RAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 124/275 (45%), Gaps = 34/275 (12%)
Query: 103 IKGAFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I +G FG V+ R VA+K+L +S+ E + +E+ + L
Sbjct: 27 IGRPLGKGKFGNVYLAREKKSHFIVALKVL------FKSQIEKEGVEHQLRREIEIQAHL 80
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HPN+ + N D I + ++EY G L K ++ F
Sbjct: 81 HHPNILRL---------YNYFYDRRRIYL-------ILEYAPRGEL----YKELQKSCTF 120
Query: 221 --KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDM 278
+ + +LA L Y KK++HRD+K EN+LL +KIADFG + + A +
Sbjct: 121 DEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRRK 179
Query: 279 TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL 338
T GTL Y+ PE++ G +N K D++ G+ +E+ + P+ S +E +V+ +L
Sbjct: 180 TM-CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDL 238
Query: 339 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
+ P P+ +++ + NP +R + +V A
Sbjct: 239 K--FPASVPTGAQDLISKLLRHNPSERLPLAQVSA 271
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ LK ++ + + ++
Sbjct: 69 LLDV--------IHTENK--------LYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYL 111
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 172 RAPEILLG------CKYYSTAVDIWSLGCI 195
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 25/249 (10%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R + E+++ L H +V F G DN +F VV+E C +L
Sbjct: 61 REKMSMEISIHRSLAHQHVVGFHG---------FFEDN-------DFVFVVLELCRRRSL 104
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+ RR+ L + G YL +++HRD+K N+ L++ VKI DFG
Sbjct: 105 LE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG 162
Query: 267 VARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSF 326
+A + GT Y+APEVL+ ++ + DV+S G ++ + P+
Sbjct: 163 LATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 222
Query: 327 SEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGM 386
E T +++N IP+ A+++++ +P RP ++E++ D G
Sbjct: 223 KE-TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGY 275
Query: 387 IPVDQPQGC 395
IP P C
Sbjct: 276 IPARLPITC 284
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 25/249 (10%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R + E+++ L H +V F G DN +F VV+E C +L
Sbjct: 59 REKMSMEISIHRSLAHQHVVGFHG---------FFEDN-------DFVFVVLELCRRRSL 102
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+ RR+ L + G YL +++HRD+K N+ L++ VKI DFG
Sbjct: 103 LE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG 160
Query: 267 VARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSF 326
+A + GT Y+APEVL+ ++ + DV+S G ++ + P+
Sbjct: 161 LATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 220
Query: 327 SEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGM 386
E T +++N IP+ A+++++ +P RP ++E++ D G
Sbjct: 221 KE-TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGY 273
Query: 387 IPVDQPQGC 395
IP P C
Sbjct: 274 IPARLPITC 282
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 32/210 (15%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
GT+G V+ R G+ VA+K + R + E + + +E+++ +L+HPN+ K
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ I T+N +V E+ LK ++ + + ++
Sbjct: 70 LLDV--------IHTENK--------LYLVFEHVDQD-LKKFMDASALTGIPLPLIKSYL 112
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L +GL++ S +++HRD+K +N+L++ +K+ADFG+AR E TL Y
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCC 317
APE+L G C YS + +W + C
Sbjct: 173 RAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 25/249 (10%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R + E+++ L H +V F G DN +F VV+E C +L
Sbjct: 61 REKMSMEISIHRSLAHQHVVGFHG---------FFEDN-------DFVFVVLELCRRRSL 104
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+ RR+ L + G YL +++HRD+K N+ L++ VKI DFG
Sbjct: 105 LE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG 162
Query: 267 VARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSF 326
+A + GT Y+APEVL+ ++ + DV+S G ++ + P+
Sbjct: 163 LATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 222
Query: 327 SEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGM 386
E T +++N IP+ A+++++ +P RP ++E++ D G
Sbjct: 223 KE-TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGY 275
Query: 387 IPVDQPQGC 395
IP P C
Sbjct: 276 IPARLPITC 284
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 25/249 (10%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R + E+++ L H +V F G DN +F VV+E C +L
Sbjct: 65 REKMSMEISIHRSLAHQHVVGFHG---------FFEDN-------DFVFVVLELCRRRSL 108
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+ RR+ L + G YL +++HRD+K N+ L++ VKI DFG
Sbjct: 109 LE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG 166
Query: 267 VARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSF 326
+A + GT Y+APEVL+ ++ + DV+S G ++ + P+
Sbjct: 167 LATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 226
Query: 327 SEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGM 386
E T +++N IP+ A+++++ +P RP ++E++ D G
Sbjct: 227 KE-TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGY 279
Query: 387 IPVDQPQGC 395
IP P C
Sbjct: 280 IPARLPITC 288
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLD---HPN 164
G +GTV+ R + G VA+K + L + +EVA+ +L+ HPN
Sbjct: 20 GAYGTVYKARDPHSGHFVALKSV----RVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
V + + TS + + +V E+ L++YL K L + +
Sbjct: 76 VVRLMDVC-ATSRTDREIK----------VTLVFEHVDQD-LRTYLDKAPPPGLPAETIK 123
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
L RGL +L + IVHRD+K EN+L+ TVK+ADFG+AR+ + +T T
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-MALTPVVVT 182
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
L Y APEVL S Y D++S G E++
Sbjct: 183 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 25/249 (10%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R + E+++ L H +V F G DN +F VV+E C +L
Sbjct: 83 REKMSMEISIHRSLAHQHVVGFHG---------FFEDN-------DFVFVVLELCRRRSL 126
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+ RR+ L + G YL +++HRD+K N+ L++ VKI DFG
Sbjct: 127 LE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG 184
Query: 267 VARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSF 326
+A + GT Y+APEVL+ ++ + DV+S G ++ + P+
Sbjct: 185 LATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 244
Query: 327 SEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGM 386
E T +++N IP+ A+++++ +P RP ++E++ D G
Sbjct: 245 KE-TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGY 297
Query: 387 IPVDQPQGC 395
IP P C
Sbjct: 298 IPARLPITC 306
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 25/249 (10%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R + E+++ L H +V F G DN +F VV+E C +L
Sbjct: 85 REKMSMEISIHRSLAHQHVVGFHG---------FFEDN-------DFVFVVLELCRRRSL 128
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG 266
+ RR+ L + G YL +++HRD+K N+ L++ VKI DFG
Sbjct: 129 LE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG 186
Query: 267 VARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSF 326
+A + GT Y+APEVL+ ++ + DV+S G ++ + P+
Sbjct: 187 LATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 246
Query: 327 SEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGM 386
E T +++N IP+ A+++++ +P RP ++E++ D G
Sbjct: 247 KE-TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGY 299
Query: 387 IPVDQPQGC 395
IP P C
Sbjct: 300 IPARLPITC 308
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 23/193 (11%)
Query: 144 ASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHG 203
S + +EVAV LDHPN+ K N+ V+ Y G
Sbjct: 77 TSSNSKLLEEVAVLKLLDHPNIMKLYD---------------FFEDKRNYYLVMECYKGG 121
Query: 204 GALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLL---DKTRTV 260
+ + + ++ V+I+ L G++YL IVHRD+K EN+LL +K +
Sbjct: 122 ELFDEIIHRMKFNEVDAAVIIKQVLS---GVTYLHKHNIVHRDLKPENLLLESKEKDALI 178
Query: 261 KIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMP 320
KI DFG++ + N M GT Y+APEVL Y+ KCDV+S G+ L+ + P
Sbjct: 179 KIVDFGLSAV-FENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPP 236
Query: 321 YPDLSFSEVTSAV 333
+ + E+ V
Sbjct: 237 FGGQTDQEILRKV 249
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 121/286 (42%), Gaps = 45/286 (15%)
Query: 105 GAFARGTFGTV--HRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK--- 159
+G FG V R D + A+K + EE + L A+ + V +
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK---NRRR 216
L+ N K A S L IQ EYC L + N++R
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQX----------------EYCENRTLYDLIHSENLNQQR 115
Query: 217 KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA-------- 268
+++ Q+ LSY+ S+ I+HR++K N+ +D++R VKI DFG+A
Sbjct: 116 DEYWRLFRQIL----EALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 269 --RLEASN----PHDMTGETGTLGYMAPEVLNGSA-YNRKCDVYSFGICLWE-IYCCDMP 320
+L++ N ++T GT Y+A EVL+G+ YN K D YS GI +E IY
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTG 231
Query: 321 YPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 366
++ + +V + P+ +++ D +P+KRP
Sbjct: 232 XERVNILKKLRSVSIE-FPPDFDDNKXKVEKKIIRLLIDHDPNKRP 276
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLD---HPN 164
G +GTV+ R + G VA+K S R L + +EVA+ +L+ HPN
Sbjct: 15 GAYGTVYKARDPHSGHFVALK-------SVRVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
V + + TS + + +V E+ L++YL K L + +
Sbjct: 68 VVRLMDVC-ATSRTDREIK----------VTLVFEHVDQD-LRTYLDKAPPPGLPAETIK 115
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
L RGL +L + IVHRD+K EN+L+ TVK+ADFG+AR+ + + T
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-MALAPVVVT 174
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
L Y APEVL S Y D++S G E++
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLD---HPN 164
G +GTV+ R + G VA+K S R L + +EVA+ +L+ HPN
Sbjct: 15 GAYGTVYKARDPHSGHFVALK-------SVRVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
V + + TS + + +V E+ L++YL K L + +
Sbjct: 68 VVRLMDVC-ATSRTDREIK----------VTLVFEHVDQD-LRTYLDKAPPPGLPAETIK 115
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
L RGL +L + IVHRD+K EN+L+ TVK+ADFG+AR+ S + T
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI-YSYQMALDPVVVT 174
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
L Y APEVL S Y D++S G E++
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 28/202 (13%)
Query: 120 YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELN 179
+ G+ VAVK +D ++ R EV + H NV + + EL
Sbjct: 68 HTGKQVAVKKMDLRKQQRRE---------LLFNEVVIMRDYHHDNVVDMYSSYLVGDEL- 117
Query: 180 IQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQS 239
VV+E+ GGAL + R + + + + L + R LSYL +
Sbjct: 118 ---------------WVVMEFLEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLHN 159
Query: 240 KKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN 299
+ ++HRD+K++++LL +K++DFG + GT +MAPEV++ Y
Sbjct: 160 QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYG 219
Query: 300 RKCDVYSFGICLWEIYCCDMPY 321
+ D++S GI + E+ + PY
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPPY 241
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLD---HPN 164
G +GTV+ R + G VA+K S R L + +EVA+ +L+ HPN
Sbjct: 15 GAYGTVYKARDPHSGHFVALK-------SVRVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
V + + TS + + +V E+ L++YL K L + +
Sbjct: 68 VVRLMDVC-ATSRTDREIK----------VTLVFEHVDQD-LRTYLDKAPPPGLPAETIK 115
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
L RGL +L + IVHRD+K EN+L+ TVK+ADFG+AR+ + + T
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-MALFPVVVT 174
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
L Y APEVL S Y D++S G E++
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 7/174 (4%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+VV+ GG L+ +L +N K + V +L L YLQ+++I+HRD+K +N+LLD
Sbjct: 92 MVVDLLLGGDLRYHLQQNVHFKE--ETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD 149
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLN---GSAYNRKCDVYSFGICLW 312
+ V I DF +A + +T GT YMAPE+ + G+ Y+ D +S G+ +
Sbjct: 150 EHGHVHITDFNIAAMLPRETQ-ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAY 208
Query: 313 EIYCCDMPYPDLSFSEVTSAV-VRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
E+ PY S + V + P + +++K+ + NPD+R
Sbjct: 209 ELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 110 GTFGTVHRGI-YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKF 168
GT+G V++ G+ VA+K + R +AE + + +E+++ +L HPN+
Sbjct: 32 GTYGVVYKAKDSQGRIVALKRI-------RLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 169 IGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL 228
I + S C +V LK L +N+ ++ I L
Sbjct: 85 IDV-----------------IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYL-Y 126
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYM 288
L RG+++ +I+HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYR 186
Query: 289 APEVLNGS-AYNRKCDVYSFGICLWEIYCCDMPYPDLS 325
AP+VL GS Y+ D++S G E+ +P ++
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 41/290 (14%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
G+ G V R + G+ VAVK++D ++ R EV + H NV +
Sbjct: 56 GSTGIVCLAREKHSGRQVAVKMMDLRKQQRRE---------LLFNEVVIMRDYQHFNVVE 106
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ + EL V++E+ GGAL + + R + V +
Sbjct: 107 MYKSYLVGEEL----------------WVLMEFLQGGALTDIVSQVRLNEEQIATVCEAV 150
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGY 287
L + L+YL ++ ++HRD+K++++LL VK++DFG + + GT +
Sbjct: 151 L---QALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYW 207
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCP 347
MAPEV++ S Y + D++S GI + E+ + PY FS+ + + LR P
Sbjct: 208 MAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY----FSD-SPVQAMKRLRDSPPPKLK 262
Query: 348 SS------LANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMIPVDQ 391
+S L + ++R +P +R E++ + T ++P+ Q
Sbjct: 263 NSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVPLIQ 312
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 110 GTFGTVHRGI-YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKF 168
GT+G V++ G+ VA+K + R +AE + + +E+++ +L HPN+
Sbjct: 32 GTYGVVYKAKDSQGRIVALKRI-------RLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 169 IGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL 228
I + S C +V LK L +N+ ++ I L
Sbjct: 85 IDV-----------------IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYL-Y 126
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYM 288
L RG+++ +I+HRD+K +N+L++ +K+ADFG+AR T E TL Y
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYR 186
Query: 289 APEVLNGS-AYNRKCDVYSFGICLWEIYCCDMPYPDLS 325
AP+VL GS Y+ D++S G E+ +P ++
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 195 CVVVEYCHGGALKSYLIKNRRRKLAFKV--VIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C+V+ +GG ++ ++ F+ I + GL +L + I++RD+K EN+
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320
Query: 253 LLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLW 312
LLD V+I+D G+A + G GT G+MAPE+L G Y+ D ++ G+ L+
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 313 EIYCCDMPY 321
E+ P+
Sbjct: 381 EMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 195 CVVVEYCHGGALKSYLIKNRRRKLAFKV--VIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C+V+ +GG ++ ++ F+ I + GL +L + I++RD+K EN+
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320
Query: 253 LLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLW 312
LLD V+I+D G+A + G GT G+MAPE+L G Y+ D ++ G+ L+
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 313 EIYCCDMPY 321
E+ P+
Sbjct: 381 EMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 195 CVVVEYCHGGALKSYLIKNRRRKLAFKV--VIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C+V+ +GG ++ ++ F+ I + GL +L + I++RD+K EN+
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320
Query: 253 LLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLW 312
LLD V+I+D G+A + G GT G+MAPE+L G Y+ D ++ G+ L+
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 313 EIYCCDMPY 321
E+ P+
Sbjct: 381 EMIAARGPF 389
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 12/188 (6%)
Query: 186 HIGMPSNFCCV--------VVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYL 237
H + FCC V+E+ +GG L ++ K+RR A A ++ L +L
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF--YAAEIISALMFL 140
Query: 238 QSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSA 297
K I++RD+K +N+LLD K+ADFG+ + N GT Y+APE+L
Sbjct: 141 HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML 200
Query: 298 YNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRC 357
Y D ++ G+ L+E+ C P+ + ++ A++ + P ++K
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV--YPTWLHEDATGILKSF 258
Query: 358 WDANPDKR 365
NP R
Sbjct: 259 MTKNPTMR 266
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 195 CVVVEYCHGGALKSYLIKNRRRKLAFKV--VIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C+V+ +GG ++ ++ F+ I + GL +L + I++RD+K EN+
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320
Query: 253 LLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLW 312
LLD V+I+D G+A + G GT G+MAPE+L G Y+ D ++ G+ L+
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 313 EIYCCDMPY 321
E+ P+
Sbjct: 381 EMIAARGPF 389
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 197 VVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
V+EY +GG L ++ + K + A +++ GL +L + I++RD+K +N++LD
Sbjct: 98 VMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDS 155
Query: 257 TRTVKIADFGVARLEASNPHDMTGET-----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+KIADFG+ + H M G T GT Y+APE++ Y + D +++G+ L
Sbjct: 156 EGHIKIADFGMCK-----EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLL 210
Query: 312 WEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ E+ +++ N+ P+ ++ K +P KR
Sbjct: 211 YEMLAGQPPFDGEDEDELFQSIMEHNV--SYPKSLSKEAVSICKGLMTKHPAKR 262
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 33/229 (14%)
Query: 104 KGAFARGTFGTVHRGIY--DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL- 160
K RG V R ++ G + AVK+++ E E ++ +R A +E + ++
Sbjct: 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPE-QLEEVREATRRETHILRQVA 157
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HP++ I + +S F +V + G L YL + + L+
Sbjct: 158 GHPHIITLIDSYESSS----------------FMFLVFDLMRKGELFDYLTE--KVALSE 199
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA-RLEASNPHDMT 279
K + L +S+L + IVHRD+K EN+LLD ++++DFG + LE P +
Sbjct: 200 KETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE---PGEKL 256
Query: 280 GET-GTLGYMAPEVLNGS------AYNRKCDVYSFGICLWEIYCCDMPY 321
E GT GY+APE+L S Y ++ D+++ G+ L+ + P+
Sbjct: 257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 27/231 (11%)
Query: 107 FARGTFGTVHRGIYD-GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
GT+G V++ + G+ A+K + R E E + + +E+++ +L H N+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-------RLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K L + ++ + +++ C GG L+S K+
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKK-----LLDVCEGG-LESVTAKS------------ 104
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL 285
L L G++Y ++++HRD+K +N+L+++ +KIADFG+AR T E TL
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL 164
Query: 286 GYMAPEVLNGS-AYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVR 335
Y AP+VL GS Y+ D++S G E+ +P +S ++ + R
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 27/231 (11%)
Query: 107 FARGTFGTVHRGIYD-GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
GT+G V++ + G+ A+K + R E E + + +E+++ +L H N+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-------RLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K L + ++ + +++ C GG L+S K+
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKK-----LLDVCEGG-LESVTAKS------------ 104
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL 285
L L G++Y ++++HRD+K +N+L+++ +KIADFG+AR T E TL
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL 164
Query: 286 GYMAPEVLNGS-AYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVR 335
Y AP+VL GS Y+ D++S G E+ +P +S ++ + R
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 27/231 (11%)
Query: 107 FARGTFGTVHRGIYD-GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
GT+G V++ + G+ A+K + R E E + + +E+++ +L H N+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-------RLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K L + ++ + +++ C GG L+S K+
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKK-----LLDVCEGG-LESVTAKS------------ 104
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL 285
L L G++Y ++++HRD+K +N+L+++ +KIADFG+AR T E TL
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL 164
Query: 286 GYMAPEVLNGS-AYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVR 335
Y AP+VL GS Y+ D++S G E+ +P +S ++ + R
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFR 215
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 152 QEVAVWHKLD---HPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKS 208
+EVAV L+ HPNV + + +TD +V E+ L +
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVS-----RTDR------ETKLTLVFEHVDQD-LTT 107
Query: 209 YLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA 268
YL K + + + + L RGL +L S ++VHRD+K +N+L+ + +K+ADFG+A
Sbjct: 108 YLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Query: 269 RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
R+ S +T TL Y APEVL S+Y D++S G E++
Sbjct: 168 RI-YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 152 QEVAVWHKLD---HPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKS 208
+EVAV L+ HPNV + + +TD +V E+ L +
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVS-----RTDR------ETKLTLVFEHVDQD-LTT 107
Query: 209 YLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA 268
YL K + + + + L RGL +L S ++VHRD+K +N+L+ + +K+ADFG+A
Sbjct: 108 YLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Query: 269 RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
R+ S +T TL Y APEVL S+Y D++S G E++
Sbjct: 168 RI-YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 30/212 (14%)
Query: 107 FARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
G F TV+ R Q VA+K + G HRSEA+ R A +E+ + +L HPN
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLG---HRSEAKDGINRTAL-REIKLLQELSHPN 73
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ + A S +++ D F +E +IK+ L +
Sbjct: 74 IIGLLDAFGHKSNISLVFD---------FMETDLEV---------IIKDNSLVLTPSHIK 115
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGT 284
L +GL YL I+HRD+K N+LLD+ +K+ADFG+A+ S + T
Sbjct: 116 AYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVT 175
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYC 316
Y APE+L G+ +Y G+ +W + C
Sbjct: 176 RWYRAPELLFGAR------MYGVGVDMWAVGC 201
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 37/256 (14%)
Query: 122 GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQ 181
G+ VAVK +D ++ R EV + H NV + + + EL
Sbjct: 99 GKLVAVKKMDLRKQQRRE---------LLFNEVVIMRDYQHENVVEMYNSYLVGDEL--- 146
Query: 182 TDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK 241
VV+E+ GGAL + R + + + + L + + LS L ++
Sbjct: 147 -------------WVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 190
Query: 242 IVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRK 301
++HRD+K++++LL VK++DFG + GT +MAPE+++ Y +
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 302 CDVYSFGICLWEIYCCDMPYPDLSFSEV---TSAVVRQNLRPEIPRC--CPSSLANVMKR 356
D++S GI + E+ + PY F+E ++R NL P + SL + R
Sbjct: 251 VDIWSLGIMVIEMVDGEPPY----FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 306
Query: 357 CWDANPDKRPEMDEVV 372
+P +R E++
Sbjct: 307 LLVRDPAQRATAAELL 322
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 152 QEVAVWHKLD---HPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKS 208
+EVAV L+ HPNV + + +TD +V E+ L +
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVS-----RTDR------ETKLTLVFEHVDQD-LTT 107
Query: 209 YLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA 268
YL K + + + + L RGL +L S ++VHRD+K +N+L+ + +K+ADFG+A
Sbjct: 108 YLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Query: 269 RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
R+ S +T TL Y APEVL S+Y D++S G E++
Sbjct: 168 RI-YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 27/221 (12%)
Query: 108 ARGTFGTVHRGIY--DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
+G F V R I GQ AVK++D + + L+ +E ++ H L HP++
Sbjct: 33 GKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK----REASICHMLKHPHI 88
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFK--VV 223
+ L + +G + M V E+ G L ++K + V
Sbjct: 89 VEL---------LETYSSDGMLYM-------VFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLL---DKTRTVKIADFGVARLEASNPHDMTG 280
+ L Y I+HRDVK EN+LL + + VK+ DFGVA + G
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGG 192
Query: 281 ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT +MAPEV+ Y + DV+ G+ L+ + +P+
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 37/256 (14%)
Query: 122 GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQ 181
G+ VAVK +D ++ R EV + H NV + + + EL
Sbjct: 45 GKLVAVKKMDLRKQQRRE---------LLFNEVVIMRDYQHENVVEMYNSYLVGDEL--- 92
Query: 182 TDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK 241
VV+E+ GGAL + R + + + + L + + LS L ++
Sbjct: 93 -------------WVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 136
Query: 242 IVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRK 301
++HRD+K++++LL VK++DFG + GT +MAPE+++ Y +
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 302 CDVYSFGICLWEIYCCDMPYPDLSFSEV---TSAVVRQNLRPEIPRC--CPSSLANVMKR 356
D++S GI + E+ + PY F+E ++R NL P + SL + R
Sbjct: 197 VDIWSLGIMVIEMVDGEPPY----FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 252
Query: 357 CWDANPDKRPEMDEVV 372
+P +R E++
Sbjct: 253 LLVRDPAQRATAAELL 268
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 37/256 (14%)
Query: 122 GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQ 181
G+ VAVK +D ++ R EV + H NV + + + EL
Sbjct: 56 GKLVAVKKMDLRKQQRRE---------LLFNEVVIMRDYQHENVVEMYNSYLVGDEL--- 103
Query: 182 TDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK 241
VV+E+ GGAL + R + + + + L + + LS L ++
Sbjct: 104 -------------WVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 147
Query: 242 IVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRK 301
++HRD+K++++LL VK++DFG + GT +MAPE+++ Y +
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 302 CDVYSFGICLWEIYCCDMPYPDLSFSEV---TSAVVRQNLRPEIPRC--CPSSLANVMKR 356
D++S GI + E+ + PY F+E ++R NL P + SL + R
Sbjct: 208 VDIWSLGIMVIEMVDGEPPY----FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 263
Query: 357 CWDANPDKRPEMDEVV 372
+P +R E++
Sbjct: 264 LLVRDPAQRATAAELL 279
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 37/256 (14%)
Query: 122 GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQ 181
G+ VAVK +D ++ R EV + H NV + + + EL
Sbjct: 49 GKLVAVKKMDLRKQQRRE---------LLFNEVVIMRDYQHENVVEMYNSYLVGDEL--- 96
Query: 182 TDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK 241
VV+E+ GGAL + R + + + + L + + LS L ++
Sbjct: 97 -------------WVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 140
Query: 242 IVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRK 301
++HRD+K++++LL VK++DFG + GT +MAPE+++ Y +
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 302 CDVYSFGICLWEIYCCDMPYPDLSFSEV---TSAVVRQNLRPEIPRC--CPSSLANVMKR 356
D++S GI + E+ + PY F+E ++R NL P + SL + R
Sbjct: 201 VDIWSLGIMVIEMVDGEPPY----FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 256
Query: 357 CWDANPDKRPEMDEVV 372
+P +R E++
Sbjct: 257 LLVRDPAQRATAAELL 272
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 37/256 (14%)
Query: 122 GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQ 181
G+ VAVK +D ++ R EV + H NV + + + EL
Sbjct: 54 GKLVAVKKMDLRKQQRRE---------LLFNEVVIMRDYQHENVVEMYNSYLVGDEL--- 101
Query: 182 TDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK 241
VV+E+ GGAL + R + + + + L + + LS L ++
Sbjct: 102 -------------WVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 145
Query: 242 IVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRK 301
++HRD+K++++LL VK++DFG + GT +MAPE+++ Y +
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 302 CDVYSFGICLWEIYCCDMPYPDLSFSEV---TSAVVRQNLRPEIPRC--CPSSLANVMKR 356
D++S GI + E+ + PY F+E ++R NL P + SL + R
Sbjct: 206 VDIWSLGIMVIEMVDGEPPY----FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 261
Query: 357 CWDANPDKRPEMDEVV 372
+P +R E++
Sbjct: 262 LLVRDPAQRATAAELL 277
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 37/256 (14%)
Query: 122 GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQ 181
G+ VAVK +D ++ R EV + H NV + + + EL
Sbjct: 176 GKLVAVKKMDLRKQQRRE---------LLFNEVVIMRDYQHENVVEMYNSYLVGDEL--- 223
Query: 182 TDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK 241
VV+E+ GGAL + R + + + + L + + LS L ++
Sbjct: 224 -------------WVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 267
Query: 242 IVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRK 301
++HRD+K++++LL VK++DFG + GT +MAPE+++ Y +
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 302 CDVYSFGICLWEIYCCDMPYPDLSFSEV---TSAVVRQNLRPEIPRC--CPSSLANVMKR 356
D++S GI + E+ + PY F+E ++R NL P + SL + R
Sbjct: 328 VDIWSLGIMVIEMVDGEPPY----FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 383
Query: 357 CWDANPDKRPEMDEVV 372
+P +R E++
Sbjct: 384 LLVRDPAQRATAAELL 399
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 195 CVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLL 254
C+V+ +GG LK ++ + + A ++ GL L ++IV+RD+K EN+LL
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
Query: 255 DKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI 314
D ++I+D G+A + + G GT+GYMAPEV+ Y D ++ G L+E+
Sbjct: 320 DDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
Query: 315 YCCDMPY 321
P+
Sbjct: 379 IAGQSPF 385
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 195 CVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLL 254
C+V+ +GG LK ++ + + A ++ GL L ++IV+RD+K EN+LL
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
Query: 255 DKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI 314
D ++I+D G+A + + G GT+GYMAPEV+ Y D ++ G L+E+
Sbjct: 320 DDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
Query: 315 YCCDMPY 321
P+
Sbjct: 379 IAGQSPF 385
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 54/279 (19%)
Query: 110 GTFGTVHRGIYDGQD---VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FG V R + D Q VAVK ++ GE+ + +E+ L HPN+
Sbjct: 30 GNFG-VARLMRDKQANELVAVKYIERGEK----------IDENVKREIINHRSLRHPNIV 78
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR-----RKLAFK 221
+F + + L +V+EY GG L + R + F+
Sbjct: 79 RFKEVILTPTHL----------------AIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 222 VVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT--VKIADFGVARLEASNPHDM- 278
+I G+SY + ++ HRD+K EN LLD + +KIADFG ++ AS H
Sbjct: 123 QLIS-------GVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK--ASVLHSQP 173
Query: 279 TGETGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPYPD----LSFSEVTSAV 333
GT Y+APEVL Y+ K DV+S G+ L+ + P+ D +F + +
Sbjct: 174 KSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
Query: 334 VR-QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 371
+ Q P+ P +++ R + A+P KR + E+
Sbjct: 234 LNVQYAIPDYVHISPEC-RHLISRIFVADPAKRISIPEI 271
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 33/227 (14%)
Query: 103 IKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+K +G F V R ++ G + A K+++ + S R ++ +E + KL
Sbjct: 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKL-------EREARICRKL 85
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA- 219
HPN+ + + IQ ++ H +V + GG L ++ A
Sbjct: 86 QHPNIVRLHDS--------IQEESFHY--------LVFDLVTGGELFEDIVAREFYSEAD 129
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFGVARLEASNPH 276
IQ L+ ++Y S IVHR++K EN+LL K VK+ADFG+A +E ++
Sbjct: 130 ASHCIQQILE---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSE 185
Query: 277 DMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD 323
G GT GY++PEVL Y++ D+++ G+ L+ + P+ D
Sbjct: 186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 123/279 (44%), Gaps = 54/279 (19%)
Query: 110 GTFGTVHRGIYDGQD---VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FG V R + D Q VAVK ++ GE+ + A +E+ L HPN+
Sbjct: 30 GNFG-VARLMRDKQSNELVAVKYIERGEK----------IAANVKREIINHRSLRHPNIV 78
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR-----RKLAFK 221
+F + + L +V+EY GG L + R + F+
Sbjct: 79 RFKEVILTPTHL----------------AIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 222 VVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT--VKIADFGVARLEASNPHDMT 279
+I G+SY + ++ HRD+K EN LLD + +KI DFG ++ +S H
Sbjct: 123 QLIS-------GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK--SSVLHSQP 173
Query: 280 GET-GTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPYPD----LSFSEVTSAV 333
T GT Y+APEVL Y+ K DV+S G+ L+ + P+ D +F + +
Sbjct: 174 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
Query: 334 VR-QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 371
+ Q P+ P +++ R + A+P KR + E+
Sbjct: 234 LNVQYAIPDYVHISPEC-RHLISRIFVADPAKRISIPEI 271
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 33/227 (14%)
Query: 103 IKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+K +G F V R ++ G + A K+++ + S R ++ +E + KL
Sbjct: 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKL-------EREARICRKL 62
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA- 219
HPN+ + + IQ ++ H +V + GG L ++ A
Sbjct: 63 QHPNIVRLHDS--------IQEESFHY--------LVFDLVTGGELFEDIVAREFYSEAD 106
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFGVARLEASNPH 276
IQ L+ ++Y S IVHR++K EN+LL K VK+ADFG+A +E ++
Sbjct: 107 ASHCIQQILE---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSE 162
Query: 277 DMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD 323
G GT GY++PEVL Y++ D+++ G+ L+ + P+ D
Sbjct: 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 33/227 (14%)
Query: 103 IKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+K +G F V R ++ G + A K+++ + S R ++ +E + KL
Sbjct: 9 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKL-------EREARICRKL 61
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA- 219
HPN+ + +IQ ++ H +V + GG L ++ A
Sbjct: 62 QHPNIVRL--------HDSIQEESFHY--------LVFDLVTGGELFEDIVAREFYSEAD 105
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFGVARLEASNPH 276
IQ L+ ++Y S IVHR++K EN+LL K VK+ADFG+A +E ++
Sbjct: 106 ASHCIQQILE---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSE 161
Query: 277 DMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD 323
G GT GY++PEVL Y++ D+++ G+ L+ + P+ D
Sbjct: 162 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 208
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 33/227 (14%)
Query: 103 IKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+K +G F V R ++ G + A K+++ + S R ++ +E + KL
Sbjct: 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKL-------EREARICRKL 62
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA- 219
HPN+ + +IQ ++ H +V + GG L ++ A
Sbjct: 63 QHPNIVRL--------HDSIQEESFHY--------LVFDLVTGGELFEDIVAREFYSEAD 106
Query: 220 FKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFGVARLEASNPH 276
IQ L+ ++Y S IVHR++K EN+LL K VK+ADFG+A +E ++
Sbjct: 107 ASHCIQQILE---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSE 162
Query: 277 DMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD 323
G GT GY++PEVL Y++ D+++ G+ L+ + P+ D
Sbjct: 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 92/178 (51%), Gaps = 13/178 (7%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
++++Y +GG L ++L R R +V I + ++ L +L I++RD+K EN+LLD
Sbjct: 136 LILDYINGGELFTHL-SQRERFTEHEVQIYVG-EIVLALEHLHKLGIIYRDIKLENILLD 193
Query: 256 KTRTVKIADFGVARL----EASNPHDMTGETGTLGYMAPEVLNG--SAYNRKCDVYSFGI 309
V + DFG+++ E +D GT+ YMAP+++ G S +++ D +S G+
Sbjct: 194 SNGHVVLTDFGLSKEFVADETERAYDF---CGTIEYMAPDIVRGGDSGHDKAVDWWSLGV 250
Query: 310 CLWEIYCCDMPYPDLSFSEVTSAVVRQNLR--PEIPRCCPSSLANVMKRCWDANPDKR 365
++E+ P+ + + R+ L+ P P+ + ++++R +P KR
Sbjct: 251 LMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEIXINKMLNHE 65
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 66 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 107
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 168 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLL- 254
+V+E +GG L + +++ + + L +S++ +VHRD+K EN+L
Sbjct: 83 LVMELLNGGELFERI--KKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFT 140
Query: 255 --DKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLW 312
+ +KI DFG ARL+ + + TL Y APE+LN + Y+ CD++S G+ L+
Sbjct: 141 DENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILY 200
Query: 313 EIYCCDMPY 321
+ +P+
Sbjct: 201 TMLSGQVPF 209
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
V++Y +GG L +L R R A ++A L YL S IV+RD+K EN+LLD
Sbjct: 116 FVLDYINGGELFYHL--QRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD 173
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
+ + DFG+ + + + GT Y+APEVL+ Y+R D + G L+E+
Sbjct: 174 SQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
Query: 316 CCDMPYPDLSFSEVTSAVVRQ--NLRPEIPRCCPSSLANVMKR 356
P+ + +E+ ++ + L+P I L ++++
Sbjct: 234 YGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQK 276
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEIXINKMLNHE 64
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 65 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 106
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 64
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 65 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 106
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 137/314 (43%), Gaps = 47/314 (14%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRG--IYDGQDVAVK-LLDWGEESHRSEAEIASLRA 148
Q E+ +L ++ A G F V+ + G++ A+K LL EE +R
Sbjct: 21 QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNR---------- 70
Query: 149 AFTQEVAVWHKLD-HPNVTKFI-GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
A QEV KL HPN+ +F A++G E +D G ++ E C G +
Sbjct: 71 AIIQEVCFMKKLSGHPNIVQFCSAASIGKEE----SDTGQAEF-----LLLTELCKGQLV 121
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK--IVHRDVKTENMLLDKTRTVKIAD 264
+ R L+ V+++ R + ++ +K I+HRD+K EN+LL T+K+ D
Sbjct: 122 EFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCD 181
Query: 265 FGVARLEASNP-------------HDMTGETGTLGYMAPEVLN---GSAYNRKCDVYSFG 308
FG A + P ++T T + Y PE+++ K D+++ G
Sbjct: 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPM-YRTPEIIDLYSNFPIGEKQDIWALG 240
Query: 309 ICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEM 368
L+ + P+ D + + + + ++ P + + ++++ NP++R +
Sbjct: 241 CILYLLCFRQHPFEDGAKLRIVNG--KYSIPPHDTQY--TVFHSLIRAMLQVNPEERLSI 296
Query: 369 DEVVAMLEAIDTSK 382
EVV L+ I ++
Sbjct: 297 AEVVHQLQEIAAAR 310
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 27/224 (12%)
Query: 151 TQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL 210
T E+A+ +++H N+ K L+I + G F +V+E HG L +
Sbjct: 77 TLEIAILSRVEHANIIKV---------LDIFENQG-------FFQLVMEK-HGSGLDLFA 119
Query: 211 IKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARL 270
+R +L + + L + YL+ K I+HRD+K EN+++ + T+K+ DFG A
Sbjct: 120 FIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179
Query: 271 EASNPHDMTGETGTLGYMAPEVLNGSAY-NRKCDVYSFGICLWEIYCCDMPYPDLSFSEV 329
T GT+ Y APEVL G+ Y + +++S G+ L+ + + P+ +L
Sbjct: 180 LERGKLFYTF-CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCEL----- 233
Query: 330 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVA 373
V + P P L +++ P++R ++++V
Sbjct: 234 -EETVEAAIHP--PYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 64
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 65 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 106
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 65
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 66 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 107
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 65
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 66 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 107
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 65
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 66 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 107
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 64
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 65 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 106
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEIXINKMLNHE 64
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 65 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 106
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 65
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 66 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 107
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 194 CCVVVEYC-HGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C ++V C GG L S + + + ++ + + YL S I HRDVK EN+
Sbjct: 95 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 154
Query: 253 LLDKTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
L R +K+ DFG A+ E ++ + +T T Y+APEVL Y++ CD++S G+
Sbjct: 155 LYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 213
Query: 310 CLWEIYCCDMPY 321
++ + C P+
Sbjct: 214 IMYILLCGYPPF 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 17/140 (12%)
Query: 190 PSNFCCVVVEYCHGGALKSYLIKNRRRKLAFK---VVIQLALDLARGLSYLQSKKIVHRD 246
P + + ++ C LK ++ NRR L + V + + + +A + +L SK ++HRD
Sbjct: 132 PKVYLYIQMQLCRKENLKDWM--NRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRD 189
Query: 247 VKTENMLLDKTRTVKIADFGVARLEASNPHDMT------------GETGTLGYMAPEVLN 294
+K N+ VK+ DFG+ + + T G+ GT YM+PE ++
Sbjct: 190 LKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIH 249
Query: 295 GSAYNRKCDVYSFGICLWEI 314
G+ Y+ K D++S G+ L+E+
Sbjct: 250 GNNYSHKVDIFSLGLILFEL 269
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 65
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 66 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 107
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 64
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 65 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 106
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 194 CCVVVEYC-HGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C ++V C GG L S + + + ++ + + YL S I HRDVK EN+
Sbjct: 103 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 162
Query: 253 LLDKTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
L R +K+ DFG A+ E ++ + +T T Y+APEVL Y++ CD++S G+
Sbjct: 163 LYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 221
Query: 310 CLWEIYCCDMPY 321
++ + C P+
Sbjct: 222 IMYILLCGYPPF 233
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 194 CCVVVEYC-HGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C ++V C GG L S + + + ++ + + YL S I HRDVK EN+
Sbjct: 93 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 152
Query: 253 LLDKTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
L R +K+ DFG A+ E ++ + +T T Y+APEVL Y++ CD++S G+
Sbjct: 153 LYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 211
Query: 310 CLWEIYCCDMPY 321
++ + C P+
Sbjct: 212 IMYILLCGYPPF 223
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 194 CCVVVEYC-HGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C ++V C GG L S + + + ++ + + YL S I HRDVK EN+
Sbjct: 94 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 153
Query: 253 LLDKTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
L R +K+ DFG A+ E ++ + +T T Y+APEVL Y++ CD++S G+
Sbjct: 154 LYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 212
Query: 310 CLWEIYCCDMPY 321
++ + C P+
Sbjct: 213 IMYILLCGYPPF 224
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 12 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 63
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 64 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 105
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 106 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 165
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 166 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 194 CCVVVEYC-HGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C ++V C GG L S + + + ++ + + YL S I HRDVK EN+
Sbjct: 133 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 192
Query: 253 LLDKTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
L R +K+ DFG A+ E ++ + +T T Y+APEVL Y++ CD++S G+
Sbjct: 193 LYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 251
Query: 310 CLWEIYCCDMPY 321
++ + C P+
Sbjct: 252 IMYILLCGYPPF 263
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 194 CCVVVEYC-HGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C ++V C GG L S + + + ++ + + YL S I HRDVK EN+
Sbjct: 139 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 198
Query: 253 LLDKTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
L R +K+ DFG A+ E ++ + +T T Y+APEVL Y++ CD++S G+
Sbjct: 199 LYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 257
Query: 310 CLWEIYCCDMPY 321
++ + C P+
Sbjct: 258 IMYILLCGYPPF 269
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 64
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 65 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 106
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 26/224 (11%)
Query: 148 AAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALK 207
++ E+AV K+ H N+ I N +V++ GG L
Sbjct: 65 SSIENEIAVLRKIKHENIVAL----------------EDIYESPNHLYLVMQLVSGGELF 108
Query: 208 SYLI-KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLL---DKTRTVKIA 263
++ K + +I+ LD + YL IVHRD+K EN+L D+ + I+
Sbjct: 109 DRIVEKGFYTEKDASTLIRQVLD---AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMIS 165
Query: 264 DFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD 323
DFG++++E M+ GT GY+APEVL Y++ D +S G+ + + C P+ D
Sbjct: 166 DFGLSKMEGKGDV-MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 224
Query: 324 LSFSEVTSAVVRQNLRPEIPRC--CPSSLANVMKRCWDANPDKR 365
+ S++ +++ + P S + ++ + +P+KR
Sbjct: 225 ENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKR 268
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 107 FARGTFGTVHRGIY--DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
+GTFG V + + GQ VA+K + E+ + I +LR E+ + L H N
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLM--ENEKEGFPITALR-----EIKILQLLKHEN 78
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
V I T G I + +FC E+ G L + L+K ++ K V+
Sbjct: 79 VVNLI-EICRTKASPYNRCKGSIYLVFDFC----EHDLAGLLSNVLVKFTLSEI--KRVM 131
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR----LEASNPHDMTG 280
Q+ L+ GL Y+ KI+HRD+K N+L+ + +K+ADFG+AR + S P+
Sbjct: 132 QMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 281 ETGTLGYMAPEVLNGSA-YNRKCDVYSFGICLWEIY 315
TL Y PE+L G Y D++ G + E++
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 224
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 64
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 65 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 106
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 65
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 66 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 107
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 24/218 (11%)
Query: 105 GAFARGTFGTVHRGIY--DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDH 162
+GTFG V + + GQ VA+K + E+ + I +LR E+ + L H
Sbjct: 23 AKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALR-----EIKILQLLKH 75
Query: 163 PNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKV 222
NV I T G I + +FC E+ G L + L+K ++ K
Sbjct: 76 ENVVNLI-EICRTKASPYNRCKGSIYLVFDFC----EHDLAGLLSNVLVKFTLSEI--KR 128
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR----LEASNPHDM 278
V+Q+ L+ GL Y+ KI+HRD+K N+L+ + +K+ADFG+AR + S P+
Sbjct: 129 VMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 279 TGETGTLGYMAPEVLNGSA-YNRKCDVYSFGICLWEIY 315
TL Y PE+L G Y D++ G + E++
Sbjct: 186 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 223
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 194 CCVVVEYC-HGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C ++V C GG L S + + + ++ + + YL S I HRDVK EN+
Sbjct: 89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 148
Query: 253 LLDKTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
L R +K+ DFG A+ E ++ + +T T Y+APEVL Y++ CD++S G+
Sbjct: 149 LYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 207
Query: 310 CLWEIYCCDMPY 321
++ + C P+
Sbjct: 208 IMYILLCGYPPF 219
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 96 IDPAKLIIKGAFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQE 153
ID + I K GT+G V++ I + VA+K + R E E + +E
Sbjct: 33 IDRYRRITK--LGEGTYGEVYKAIDTVTNETVAIKRI-------RLEHEEEGVPGTAIRE 83
Query: 154 VAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKN 213
V++ +L H N+ + L++ + EY LK Y+ KN
Sbjct: 84 VSLLKELQHRNIIELKSVIHHNHRLHL----------------IFEYAEND-LKKYMDKN 126
Query: 214 RRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD-----KTRTVKIADFGVA 268
++ +V+ L G+++ S++ +HRD+K +N+LL +T +KI DFG+A
Sbjct: 127 P--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184
Query: 269 RLEASNPHDMTGETGTLGYMAPEVLNGS-AYNRKCDVYSFGICLW 312
R T E TL Y PE+L GS Y+ D++S C+W
Sbjct: 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIA-CIW 228
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 194 CCVVVEYC-HGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C ++V C GG L S + + + ++ + + YL S I HRDVK EN+
Sbjct: 87 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 146
Query: 253 LLDKTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
L R +K+ DFG A+ E ++ + +T T Y+APEVL Y++ CD++S G+
Sbjct: 147 LYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 205
Query: 310 CLWEIYCCDMPY 321
++ + C P+
Sbjct: 206 IMYILLCGYPPF 217
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 64
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 65 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 106
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 107 FARGTFGTVHRGIY--DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
+GTFG V + + GQ VA+K + E+ + I +LR E+ + L H N
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLM--ENEKEGFPITALR-----EIKILQLLKHEN 78
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
V I T G I + +FC E+ G L + L+K ++ K V+
Sbjct: 79 VVNLI-EICRTKASPYNRCKGSIYLVFDFC----EHDLAGLLSNVLVKFTLSEI--KRVM 131
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR----LEASNPHDMTG 280
Q+ L+ GL Y+ KI+HRD+K N+L+ + +K+ADFG+AR + S P+
Sbjct: 132 QMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 281 ETGTLGYMAPEVLNGSA-YNRKCDVYSFGICLWEIY 315
TL Y PE+L G Y D++ G + E++
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 224
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 194 CCVVVEYC-HGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C ++V C GG L S + + + ++ + + YL S I HRDVK EN+
Sbjct: 88 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 147
Query: 253 LLDKTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
L R +K+ DFG A+ E ++ + +T T Y+APEVL Y++ CD++S G+
Sbjct: 148 LYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 206
Query: 310 CLWEIYCCDMPY 321
++ + C P+
Sbjct: 207 IMYILLCGYPPF 218
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 64
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 65 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 106
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 194 CCVVVEYC-HGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C ++V C GG L S + + + ++ + + YL S I HRDVK EN+
Sbjct: 89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 148
Query: 253 LLDKTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
L R +K+ DFG A+ E ++ + +T T Y+APEVL Y++ CD++S G+
Sbjct: 149 LYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 207
Query: 310 CLWEIYCCDMPY 321
++ + C P+
Sbjct: 208 IMYILLCGYPPF 219
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHE 64
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 65 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 106
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 119 MVLEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +K+ADFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 177 QQGYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 194 CCVVVEYC-HGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C ++V C GG L S + + + ++ + + YL S I HRDVK EN+
Sbjct: 87 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 146
Query: 253 LLDKTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
L R +K+ DFG A+ E ++ + +T T Y+APEVL Y++ CD++S G+
Sbjct: 147 LYTSKRPNAILKLTDFGFAK-ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 205
Query: 310 CLWEIYCCDMPY 321
++ + C P+
Sbjct: 206 IMYILLCGYPPF 217
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 104 KGAFARGTFGTVHRGIYDG--QDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLD 161
K RG V R I+ ++ AVK++D S E+ LR A +EV + K+
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 81
Query: 162 -HPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HPN+ + T E N F +V + G L YL + L+
Sbjct: 82 GHPNIIQL----KDTYETN------------TFFFLVFDLMKKGELFDYL--TEKVTLSE 123
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG 280
K ++ L + L IVHRD+K EN+LLD +K+ DFG + + +
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRS 182
Query: 281 ETGTLGYMAPEVL------NGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y+APE++ N Y ++ D++S G+ ++ + P+
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 106 AFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHP 163
G +G V + + VAVK++D E +E+ + L+H
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINAMLNHE 65
Query: 164 NVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVV 223
NV KF G E NIQ + +EYC GG L + + +
Sbjct: 66 NVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIEPDI--GMPEPDA 107
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD--MTGE 281
+ L G+ YL I HRD+K EN+LLD+ +KI+DFG+A + N + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 282 TGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +K+ADFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 40/225 (17%)
Query: 108 ARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
RG FG V R + A+KLL E RS++ A F +E + + P V
Sbjct: 84 GRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS------AFFWEERDIMAFANSPWV 137
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL----KSYLIKNRRRKLAFK 221
+ A Q D + +V+EY GG L +Y + + K +
Sbjct: 138 VQLFCA--------FQDDK--------YLYMVMEYMPGGDLVNLMSNYDVPEKWAKF-YT 180
Query: 222 VVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV-ARLEASNPHDMTG 280
+ LALD + S ++HRDVK +NMLLDK +K+ADFG +++ +
Sbjct: 181 AEVVLALDA------IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT 234
Query: 281 ETGTLGYMAPEVLNGSA----YNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PEVL Y R+CD +S G+ L+E+ D P+
Sbjct: 235 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 104 KGAFARGTFGTVHRGIYDG--QDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLD 161
K RG V R I+ ++ AVK++D S E+ LR A +EV + K+
Sbjct: 9 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 68
Query: 162 -HPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HPN+ + T E N F +V + G L YL + L+
Sbjct: 69 GHPNIIQL----KDTYETN------------TFFFLVFDLMKKGELFDYL--TEKVTLSE 110
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG 280
K ++ L + L IVHRD+K EN+LLD +K+ DFG + +P +
Sbjct: 111 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC--QLDPGEKLR 168
Query: 281 ET-GTLGYMAPEVL------NGSAYNRKCDVYSFGICLWEIYCCDMPY 321
E GT Y+APE++ N Y ++ D++S G+ ++ + P+
Sbjct: 169 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 21/173 (12%)
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
+E+ + L+H NV KF G E NIQ + +EYC GG L +
Sbjct: 53 KEICINKMLNHENVVKFYGHR---REGNIQY-------------LFLEYCSGGELFDRIE 96
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
+ + + L G+ YL I HRD+K EN+LLD+ +KI+DFG+A +
Sbjct: 97 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
Query: 272 ASNPHD--MTGETGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPY 321
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 54/279 (19%)
Query: 110 GTFGTVHRGIYDGQD---VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FG V R + D Q VAVK ++ GE+ + +E+ L HPN+
Sbjct: 29 GNFG-VARLMRDKQSNELVAVKYIERGEK----------IDENVKREIINHRSLRHPNIV 77
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR-----RKLAFK 221
+F + + L +V+EY GG L + R + F+
Sbjct: 78 RFKEVILTPTHL----------------AIVMEYASGGELFERICNAGRFSEDEARFFFQ 121
Query: 222 VVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT--VKIADFGVARLEASNPHDMT 279
+I G+SY + ++ HRD+K EN LLD + +KI DFG ++ +S H
Sbjct: 122 QLIS-------GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK--SSVLHSQP 172
Query: 280 GET-GTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPYPD----LSFSEVTSAV 333
T GT Y+APEVL Y+ K DV+S G+ L+ + P+ D +F + +
Sbjct: 173 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 232
Query: 334 VR-QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 371
+ Q P+ P +++ R + A+P KR + E+
Sbjct: 233 LNVQYAIPDYVHISPEC-RHLISRIFVADPAKRISIPEI 270
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 104 KGAFARGTFGTVHRGIYDG--QDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLD 161
K RG V R I+ ++ AVK++D S E+ LR A +EV + K+
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 81
Query: 162 -HPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HPN+ + T E N F +V + G L YL + L+
Sbjct: 82 GHPNIIQL----KDTYETN------------TFFFLVFDLMKKGELFDYL--TEKVTLSE 123
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG 280
K ++ L + L IVHRD+K EN+LLD +K+ DFG + +P +
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC--QLDPGEKLR 181
Query: 281 ET-GTLGYMAPEVL------NGSAYNRKCDVYSFGICLWEIYCCDMPY 321
E GT Y+APE++ N Y ++ D++S G+ ++ + P+
Sbjct: 182 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +K+ADFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 194 CCVVVEYC-HGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C +++ C GG L S + + + + ++ D+ + +L S I HRDVK EN+
Sbjct: 100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENL 159
Query: 253 LL---DKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
L +K +K+ DFG A+ N + T Y+APEVL Y++ CD++S G+
Sbjct: 160 LYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 217
Query: 310 CLWEIYCCDMPY 321
++ + C P+
Sbjct: 218 IMYILLCGFPPF 229
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +K+ADFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 194 CCVVVEYC-HGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C ++V C GG L S + + + ++ + + YL S I HRDVK EN+
Sbjct: 133 CLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENL 192
Query: 253 LLDKTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
L R +K+ DFG A+ E ++ + +T T Y+APEVL Y++ CD +S G+
Sbjct: 193 LYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGV 251
Query: 310 CLWEIYCCDMPY 321
+ + C P+
Sbjct: 252 IXYILLCGYPPF 263
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 194 CCVVVEYC-HGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
C +++ C GG L S + + + + ++ D+ + +L S I HRDVK EN+
Sbjct: 81 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENL 140
Query: 253 LL---DKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
L +K +K+ DFG A+ N + T Y+APEVL Y++ CD++S G+
Sbjct: 141 LYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 198
Query: 310 CLWEIYCCDMPY 321
++ + C P+
Sbjct: 199 IMYILLCGFPPF 210
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 52/299 (17%)
Query: 101 LIIKGAFARGTFGTVHRGIYD-----GQ----DVAVKLLDWGEESHRSEAEIASLRAAFT 151
LI + +GTF + +G+ GQ +V +K+LD ++HR+ +E +F
Sbjct: 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD---KAHRNYSE------SFF 60
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
+ ++ KL H ++ G + E NI +V E+ G+L +YL
Sbjct: 61 EAASMMSKLSHKHLVLNYGVCVCGDE-NI---------------LVQEFVKFGSLDTYLK 104
Query: 212 KNRR-RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT--------VKI 262
KN+ + +K +++A LA + +L+ ++H +V +N+LL + +K+
Sbjct: 105 KNKNCINILWK--LEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL 162
Query: 263 ADFGVARLEASNPHDMTGETGTLGYMAPEVL-NGSAYNRKCDVYSFGICLWEIYCCDMPY 321
+D G++ P D+ E + ++ PE + N N D +SFG LWEI C
Sbjct: 163 SDPGISI--TVLPKDILQER--IPWVPPECIENPKNLNLATDKWSFGTTLWEI--CSGGD 216
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDT 380
LS + + R ++P + LAN++ C D PD RP ++ L ++ T
Sbjct: 217 KPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 30/265 (11%)
Query: 103 IKGAFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I +G FG V+ R + +A+K+L +S+ E + +E+ + L
Sbjct: 18 IGRPLGKGKFGNVYLAREKQNKFIMALKVL------FKSQLEKEGVEHQLRREIEIQSHL 71
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HPN+ + N D I +++E+ G L L K+ R
Sbjct: 72 RHPNILRMY---------NYFHDRKRI-------YLMLEFAPRGELYKELQKHGR--FDE 113
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG 280
+ +LA L Y +K++HRD+K EN+L+ +KIADFG + S
Sbjct: 114 QRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM- 172
Query: 281 ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRP 340
GTL Y+ PE++ G ++ K D++ G+ +E P+ S +E +V +L+
Sbjct: 173 -CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK- 230
Query: 341 EIPRCCPSSLANVMKRCWDANPDKR 365
P +++ + +P +R
Sbjct: 231 -FPPFLSDGSKDLISKLLRYHPPQR 254
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 121/278 (43%), Gaps = 52/278 (18%)
Query: 110 GTFGT--VHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
G FG + R + VAVK ++ G A++ +E+ L HPN+ +
Sbjct: 31 GNFGVARLMRDKLTKELVAVKYIERG----------AAIDENVQREIINHRSLRHPNIVR 80
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK-NRRRKLAFKVVIQL 226
F + + L I ++EY GG L + R + + Q
Sbjct: 81 FKEVILTPTHLAI----------------IMEYASGGELYERICNAGRFSEDEARFFFQ- 123
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT--VKIADFGVARLEASNPHDMTGET-G 283
L G+SY S +I HRD+K EN LLD + +KI DFG ++ +S H T G
Sbjct: 124 --QLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSVLHSQPKSTVG 179
Query: 284 TLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPYPD----LSFSEVTSAV--VRQ 336
T Y+APEVL Y+ K DV+S G+ L+ + P+ D + + + V+
Sbjct: 180 TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY 239
Query: 337 NLRPEI---PRCCPSSLANVMKRCWDANPDKRPEMDEV 371
++ +I P CC +++ R + A+P R + E+
Sbjct: 240 SIPDDIRISPECC-----HLISRIFVADPATRISIPEI 272
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 100/230 (43%), Gaps = 50/230 (21%)
Query: 108 ARGTFGTVH-------RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
RG FG V R +Y A+KLL E RS++ A F +E +
Sbjct: 78 GRGAFGEVQLVRHKSTRKVY-----AMKLLSKFEMIKRSDS------AFFWEERDIMAFA 126
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL----KSYLIKNRRR 216
+ P V + A Q D + +V+EY GG L +Y + +
Sbjct: 127 NSPWVVQLFYA--------FQDDR--------YLYMVMEYMPGGDLVNLMSNYDVPEKWA 170
Query: 217 KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV-ARLEASNP 275
+ + + LALD + S +HRDVK +NMLLDK+ +K+ADFG ++
Sbjct: 171 RF-YTAEVVLALDA------IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223
Query: 276 HDMTGETGTLGYMAPEVLNGSA----YNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PEVL Y R+CD +S G+ L+E+ D P+
Sbjct: 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 52/299 (17%)
Query: 101 LIIKGAFARGTFGTVHRGIYD-----GQ----DVAVKLLDWGEESHRSEAEIASLRAAFT 151
LI + +GTF + +G+ GQ +V +K+LD ++HR+ +E +F
Sbjct: 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD---KAHRNYSE------SFF 60
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
+ ++ KL H ++ G E NI +V E+ G+L +YL
Sbjct: 61 EAASMMSKLSHKHLVLNYGVCFCGDE-NI---------------LVQEFVKFGSLDTYLK 104
Query: 212 KNRR-RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT--------VKI 262
KN+ + +K +++A LA + +L+ ++H +V +N+LL + +K+
Sbjct: 105 KNKNCINILWK--LEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL 162
Query: 263 ADFGVARLEASNPHDMTGETGTLGYMAPEVL-NGSAYNRKCDVYSFGICLWEIYCCDMPY 321
+D G++ P D+ E + ++ PE + N N D +SFG LWEI C
Sbjct: 163 SDPGISI--TVLPKDILQER--IPWVPPECIENPKNLNLATDKWSFGTTLWEI--CSGGD 216
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDT 380
LS + + R ++P + LAN++ C D PD RP ++ L ++ T
Sbjct: 217 KPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 100/230 (43%), Gaps = 50/230 (21%)
Query: 108 ARGTFGTVH-------RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
RG FG V R +Y A+KLL E RS++ A F +E +
Sbjct: 83 GRGAFGEVQLVRHKSTRKVY-----AMKLLSKFEMIKRSDS------AFFWEERDIMAFA 131
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL----KSYLIKNRRR 216
+ P V + A Q D + +V+EY GG L +Y + +
Sbjct: 132 NSPWVVQLFYA--------FQDDR--------YLYMVMEYMPGGDLVNLMSNYDVPEKWA 175
Query: 217 KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV-ARLEASNP 275
+ + + LALD + S +HRDVK +NMLLDK+ +K+ADFG ++
Sbjct: 176 RF-YTAEVVLALDA------IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 228
Query: 276 HDMTGETGTLGYMAPEVLNGSA----YNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PEVL Y R+CD +S G+ L+E+ D P+
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 30/265 (11%)
Query: 103 IKGAFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I +G FG V+ R + +A+K+L +S+ E + +E+ + L
Sbjct: 19 IGRPLGKGKFGNVYLAREKQNKFIMALKVL------FKSQLEKEGVEHQLRREIEIQSHL 72
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HPN+ + N D I +++E+ G L L K+ R
Sbjct: 73 RHPNILRMY---------NYFHDRKRI-------YLMLEFAPRGELYKELQKHGR--FDE 114
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG 280
+ +LA L Y +K++HRD+K EN+L+ +KIADFG + S
Sbjct: 115 QRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM- 173
Query: 281 ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRP 340
GTL Y+ PE++ G ++ K D++ G+ +E P+ S +E +V +L+
Sbjct: 174 -CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK- 231
Query: 341 EIPRCCPSSLANVMKRCWDANPDKR 365
P +++ + +P +R
Sbjct: 232 -FPPFLSDGSKDLISKLLRYHPPQR 255
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 100/230 (43%), Gaps = 50/230 (21%)
Query: 108 ARGTFGTVH-------RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
RG FG V R +Y A+KLL E RS++ A F +E +
Sbjct: 83 GRGAFGEVQLVRHKSTRKVY-----AMKLLSKFEMIKRSDS------AFFWEERDIMAFA 131
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL----KSYLIKNRRR 216
+ P V + A Q D + +V+EY GG L +Y + +
Sbjct: 132 NSPWVVQLFYA--------FQDDR--------YLYMVMEYMPGGDLVNLMSNYDVPEKWA 175
Query: 217 KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV-ARLEASNP 275
+ + + LALD + S +HRDVK +NMLLDK+ +K+ADFG ++
Sbjct: 176 RF-YTAEVVLALDA------IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 228
Query: 276 HDMTGETGTLGYMAPEVLNGSA----YNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PEVL Y R+CD +S G+ L+E+ D P+
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARV-ADPDHDHTGFLTEYVATR 191
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 30/265 (11%)
Query: 103 IKGAFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I +G FG V+ R + +A+K+L +S+ E + +E+ + L
Sbjct: 18 IVRPLGKGKFGNVYLAREKQNKFIMALKVL------FKSQLEKEGVEHQLRREIEIQSHL 71
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HPN+ + N D I +++E+ G L L K+ R
Sbjct: 72 RHPNILRMY---------NYFHDRKRI-------YLMLEFAPRGELYKELQKHGR--FDE 113
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG 280
+ +LA L Y +K++HRD+K EN+L+ +KIADFG + S
Sbjct: 114 QRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM- 172
Query: 281 ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRP 340
GTL Y+ PE++ G ++ K D++ G+ +E P+ S +E +V +L+
Sbjct: 173 -CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK- 230
Query: 341 EIPRCCPSSLANVMKRCWDANPDKR 365
P +++ + +P +R
Sbjct: 231 -FPPFLSDGSKDLISKLLRYHPPQR 254
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
M E T Y APEV+ G Y D++S G + E+ C + +P + + +
Sbjct: 177 GTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNK 236
Query: 333 VVRQNLRPEIPRCCPSSLANV 353
V+ Q P CP+ + +
Sbjct: 237 VIEQLGTP-----CPAFMKKL 252
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + A A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 107 FARGTFGTVHRGIY--DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
+GTFG V + + GQ VA+K + E+ + I +LR E+ + L H N
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALR-----EIKILQLLKHEN 78
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
V I T I + +FC E+ G L + L+K ++ K V+
Sbjct: 79 VVNLI-EICRTKASPYNRCKASIYLVFDFC----EHDLAGLLSNVLVKFTLSEI--KRVM 131
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR----LEASNPHDMTG 280
Q+ L+ GL Y+ KI+HRD+K N+L+ + +K+ADFG+AR + S P+
Sbjct: 132 QMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 281 ETGTLGYMAPEVLNGSA-YNRKCDVYSFGICLWEIY 315
TL Y PE+L G Y D++ G + E++
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 224
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATR 191
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATR 191
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARV-ADPDHDHTGFLTEYVATR 193
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATR 195
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATR 195
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+++D
Sbjct: 118 MVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +K+ DFG+A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIKVTDFGLAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATR 211
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 15/176 (8%)
Query: 194 CCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENML 253
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 254 LDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWE 313
+D+ +++ DFG A+ + GT Y+APE++ YN+ D ++ G+ ++E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL---AGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 314 IYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 47/266 (17%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
G+FG V + + G A+K+LD + ++ L+ + H L+ + +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILD--------KQKVVKLKQ-------IEHTLNEKRILQ 97
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ T DN ++ M V+EY GG + S+L R + + A
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYM-------VMEYAPGGEMFSHL--RRIGRFSEPHARFYA 148
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET----G 283
+ YL S +++RD+K EN+++D+ +K+ DFG A+ + G T G
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTWXLCG 201
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLR 339
T Y+APE++ YN+ D ++ G+ ++E+ P+ P + ++ S VR
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR---- 257
Query: 340 PEIPRCCPSSLANVMKRCWDANPDKR 365
P S L ++++ + KR
Sbjct: 258 --FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 47/266 (17%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
G+FG V + + G A+K+LD + ++ L+ + H L+ + +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILD--------KQKVVKLKQ-------IEHTLNEKRILQ 97
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
+ T DN ++ M V+EY GG + S+L R + + A
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYM-------VMEYAPGGEMFSHL--RRIGRFSEPHARFYA 148
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET----G 283
+ YL S +++RD+K EN+++D+ +K+ DFG A+ + G T G
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTWXLCG 201
Query: 284 TLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLR 339
T Y+APE++ YN+ D ++ G+ ++E+ P+ P + ++ S VR
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR---- 257
Query: 340 PEIPRCCPSSLANVMKRCWDANPDKR 365
P S L ++++ + KR
Sbjct: 258 --FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 15/176 (8%)
Query: 194 CCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENML 253
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 254 LDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWE 313
+D+ +++ DFG A+ + GT Y+APE++ YN+ D ++ G+ ++E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL---XGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 314 IYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 21/134 (15%)
Query: 196 VVVEYCHGGALKSYLIKNRR-RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLL 254
+V E GG++ S++ K R +L VV+Q D+A L +L +K I HRD+K EN+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGIAHRDLKPENILC 144
Query: 255 D---KTRTVKIADFGVA---RLEA-----SNPHDMTGETGTLGYMAPEVL-----NGSAY 298
+ + VKI DFG+ +L S P +T G+ YMAPEV+ S Y
Sbjct: 145 EHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLT-PCGSAEYMAPEVVEAFSEEASIY 203
Query: 299 NRKCDVYSFGICLW 312
+++CD++S G+ L+
Sbjct: 204 DKRCDLWSLGVILY 217
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 44/309 (14%)
Query: 96 IDPAKLIIKGAFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQE 153
ID + G F V G++DG A+K + E+ R EA Q
Sbjct: 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEA----------QR 75
Query: 154 VAVWHKL-DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL-- 210
A H+L +HPN+ + + + + G + +++ + G L + +
Sbjct: 76 EADMHRLFNHPNILRLVAYCL--------RERG----AKHEAWLLLPFFKRGTLWNEIER 123
Query: 211 IKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV--- 267
+K++ L ++ L L + RGL + +K HRD+K N+LL + D G
Sbjct: 124 LKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183
Query: 268 ------ARLEASNPHDMTGETGTLGYMAPEVLNGSAY---NRKCDVYSFGICLWEIYCCD 318
+A D + T+ Y APE+ + ++ + + DV+S G L+ + +
Sbjct: 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
Query: 319 MPYPDLSFSE---VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAML 375
PY D+ F + V AV Q P+ PR S+L ++ +P +RP + +++ L
Sbjct: 244 GPY-DMVFQKGDSVALAVQNQLSIPQSPRHS-SALWQLLNSMMTVDPHQRPHIPLLLSQL 301
Query: 376 EAIDTSKGG 384
EA+ G
Sbjct: 302 EALQPPAPG 310
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 104/233 (44%), Gaps = 30/233 (12%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDG---QDVAVKLLDWGEESHRSEAEIASLRAAF 150
WE+ P +L G +G+V YD Q VAVK L R + R +
Sbjct: 24 WEV-PQRLQGLRPVGSGAYGSVCSA-YDARLRQKVAVKKLS------RPFQSLIHARRTY 75
Query: 151 TQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL 210
+E+ + L H NV + + + +F V + GA + +
Sbjct: 76 -RELRLLKHLKHENVIGLLDVFTPATSIE------------DFSEVYLVTTLMGADLNNI 122
Query: 211 IKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARL 270
+K++ L+ + V L L RGL Y+ S I+HRD+K N+ +++ ++I DFG+AR
Sbjct: 123 VKSQ--ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR- 179
Query: 271 EASNPHDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 180 --QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFP 230
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+++D
Sbjct: 118 MVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +K+ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+++D
Sbjct: 119 MVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +K+ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 177 QQGYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 59/272 (21%)
Query: 110 GTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
G+FG V + + G A+K+LD + ++ L+ + H L+ + +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILD--------KQKVVKLKQ-------IEHTLNEKRILQ 97
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR------RKLAFK 221
+ T DN ++ M V+EY GG + S+L + R R A +
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYM-------VMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ 150
Query: 222 VVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE 281
+V+ YL S +++RD+K EN+++D+ +K+ DFG A+ + G
Sbjct: 151 IVLTF--------EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGR 195
Query: 282 T----GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY----PDLSFSEVTSAV 333
T GT Y+APE++ YN+ D ++ G+ ++E+ P+ P + ++ S
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 334 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
VR P S L ++++ + KR
Sbjct: 256 VR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 196 VVVEYCHGGALKSYLIKNRR------RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
+V+EY GG + S+L + R R A ++V+ YL S +++RD+K
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKP 169
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVY 305
EN+++D+ +K+ DFG A+ + G T GT Y+APE++ YN+ D +
Sbjct: 170 ENLMIDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 306 SFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDAN 361
+ G+ ++E+ P+ P + ++ S VR P S L ++++ +
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVD 276
Query: 362 PDKR 365
KR
Sbjct: 277 LTKR 280
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 32/179 (17%)
Query: 153 EVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIK 212
E+ V +L HPN+ K +E+++ V+E GG L +++
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISL----------------VLELVTGGELFDRIVE 141
Query: 213 N-----RRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT---VKIAD 264
R A K +++ ++YL IVHRD+K EN+L +KIAD
Sbjct: 142 KGYYSERDAADAVKQILE-------AVAYLHENGIVHRDLKPENLLYATPAPDAPLKIAD 194
Query: 265 FGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD 323
FG++++ + M GT GY APE+L G AY + D++S GI + + C P+ D
Sbjct: 195 FGLSKI-VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 120/280 (42%), Gaps = 56/280 (20%)
Query: 110 GTFGTVHRGIYDGQD---VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FG V R + D Q VAVK ++ GE+ + +E+ L HPN+
Sbjct: 30 GNFG-VARLMRDKQSNELVAVKYIERGEK----------IDENVKREIINHRSLRHPNIV 78
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR-----RKLAFK 221
+F + + L +V+EY GG L + R + F+
Sbjct: 79 RFKEVILTPTHL----------------AIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 222 VVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT--VKIADFGVARLEA--SNPHD 277
+I G+SY + ++ HRD+K EN LLD + +KI FG ++ S P D
Sbjct: 123 QLIS-------GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKD 175
Query: 278 MTGETGTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPYPD----LSFSEVTSA 332
GT Y+APEVL Y+ K DV+S G+ L+ + P+ D +F +
Sbjct: 176 T---VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHR 232
Query: 333 VVR-QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 371
++ Q P+ P +++ R + A+P KR + E+
Sbjct: 233 ILNVQYAIPDYVHISPEC-RHLISRIFVADPAKRISIPEI 271
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATR 195
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 139 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 197 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 249
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 250 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATR 196
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 196 VVVEYCHGGALKSYLIKNRR------RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
+V+EY GG + S+L + R R A ++V+ YL S +++RD+K
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKP 190
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVY 305
EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D +
Sbjct: 191 ENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 243
Query: 306 SFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDAN 361
+ G+ ++E+ P+ P + ++ S VR P S L ++++ +
Sbjct: 244 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVD 297
Query: 362 PDKR 365
KR
Sbjct: 298 LTKR 301
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 40/245 (16%)
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA---- 205
+E+ + HPN+ + + + EL +V++ GG+
Sbjct: 55 LLKEIQAMSQCHHPNIVSYYTSFVVKDEL----------------WLVMKLLSGGSVLDI 98
Query: 206 LKSYLIKNRRRK--LAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIA 263
+K + K + L + + ++ GL YL +HRDVK N+LL + +V+IA
Sbjct: 99 IKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIA 158
Query: 264 DFGVARLEASNPHDMTGE------TGTLGYMAPEVLNG-SAYNRKCDVYSFGICLWEIYC 316
DFGV+ A+ D+T GT +MAPEV+ Y+ K D++SFGI E+
Sbjct: 159 DFGVSAFLATG-GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT 217
Query: 317 CDMPYPDLSFSEVTSAVVRQNLRP---------EIPRCCPSSLANVMKRCWDANPDKRPE 367
PY +V + QN P E+ + S ++ C +P+KRP
Sbjct: 218 GAAPYHKYPPMKVL-MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
Query: 368 MDEVV 372
E++
Sbjct: 277 AAELL 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 40/245 (16%)
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA---- 205
+E+ + HPN+ + + + EL +V++ GG+
Sbjct: 60 LLKEIQAMSQCHHPNIVSYYTSFVVKDEL----------------WLVMKLLSGGSVLDI 103
Query: 206 LKSYLIKNRRRK--LAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIA 263
+K + K + L + + ++ GL YL +HRDVK N+LL + +V+IA
Sbjct: 104 IKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIA 163
Query: 264 DFGVARLEASNPHDMTGE------TGTLGYMAPEVLNG-SAYNRKCDVYSFGICLWEIYC 316
DFGV+ A+ D+T GT +MAPEV+ Y+ K D++SFGI E+
Sbjct: 164 DFGVSAFLATG-GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT 222
Query: 317 CDMPYPDLSFSEVTSAVVRQNLRP---------EIPRCCPSSLANVMKRCWDANPDKRPE 367
PY +V + QN P E+ + S ++ C +P+KRP
Sbjct: 223 GAAPYHKYPPMKVL-MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
Query: 368 MDEVV 372
E++
Sbjct: 282 AAELL 286
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADEPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
M E T Y APEV+ G Y D++S G + E+ C + +P + + +
Sbjct: 177 GTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 196 VVVEYCHGGALKSYLIKNRR------RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
+V+EY GG + S+L + R R A ++V+ YL S +++RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKP 169
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVY 305
EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 306 SFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDAN 361
+ G+ ++E+ P+ P + ++ S VR P S L ++++ +
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVD 276
Query: 362 PDKR 365
KR
Sbjct: 277 LTKR 280
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 196 VVVEYCHGGALKSYLIKNRR------RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
+V+EY GG + S+L + R R A ++V+ YL S +++RD+K
Sbjct: 113 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKP 164
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVY 305
EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D +
Sbjct: 165 ENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 217
Query: 306 SFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDAN 361
+ G+ ++E+ P+ P + ++ S VR P S L ++++ +
Sbjct: 218 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVD 271
Query: 362 PDKR 365
KR
Sbjct: 272 LTKR 275
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 119 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 177 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 139 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 197 QQGYIQVTDFGFAK-------RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 249
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 250 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 119 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 177 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 119 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 177 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 119 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 177 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 119 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 177 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 196 VVVEYCHGGALKSYLIKNRR------RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
+V+EY GG + S+L + R R A ++V+ YL S +++RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKP 169
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVY 305
EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 306 SFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDAN 361
+ G+ ++E+ P+ P + ++ S VR P S L ++++ +
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVD 276
Query: 362 PDKR 365
KR
Sbjct: 277 LTKR 280
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 196 VVVEYCHGGALKSYLIKNRR------RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
+V+EY GG + S+L + R R A ++V+ YL S +++RD+K
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKP 169
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVY 305
EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 306 SFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDAN 361
+ G+ ++E+ P+ P + ++ S VR P S L ++++ +
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVD 276
Query: 362 PDKR 365
KR
Sbjct: 277 LTKR 280
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 119 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 177 QQGYIQVTDFGFAK-------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 193
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+L++ T +KI DFG+AR+ A HD TG T
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARI-ADPEHDHTGFLTEXVATR 211
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 191
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 196 VVVEYCHGGALKSYLIKNRR------RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
+V+EY GG + S+L + R R A ++V+ YL S +++RD+K
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKP 169
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVY 305
EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 306 SFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDAN 361
+ G+ ++E+ P+ P + ++ S VR P S L ++++ +
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVD 276
Query: 362 PDKR 365
KR
Sbjct: 277 LTKR 280
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 196 VVVEYCHGGALKSYLIKNRR------RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
+V+EY GG + S+L + R R A ++V+ YL S +++RD+K
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKP 170
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVY 305
EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 306 SFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDAN 361
+ G+ ++E+ P+ P + ++ S VR P S L ++++ +
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVD 277
Query: 362 PDKR 365
KR
Sbjct: 278 LTKR 281
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 195
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 25/230 (10%)
Query: 107 FARGTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
GT+ TV++G D V L + E H A ++R EV++ L H N+
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLE-HEEGAPCTAIR-----EVSLLKDLKHANIV 63
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQL 226
T I T+ +V EY LK YL + + V
Sbjct: 64 --------TLHDIIHTEKS--------LTLVFEYLDKD-LKQYL-DDCGNIINMHNVKLF 105
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLG 286
L RGL+Y +K++HRD+K +N+L+++ +K+ADFG+AR ++ E TL
Sbjct: 106 LFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLW 165
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVR 335
Y P++L GS Y+ + D++ G +E+ +P + E + R
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFR 215
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+++EY GG L ++ R +++ L +L K I++RD+K EN++L+
Sbjct: 98 LILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
VK+ DFG+ + + GT+ YMAPE+L S +NR D +S G ++++
Sbjct: 156 HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215
Query: 316 CCDMPYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKR 356
P+ + + ++ + NL P + + L ++KR
Sbjct: 216 TGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKR 258
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
Query: 197 VVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
+V + G L + + + +KL V L + RGL Y+ S I+HRD+K N+ +++
Sbjct: 104 LVTHLMGADLNNIV---KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 257 TRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIY 315
+KI DFG+AR +MTG T Y APE+ LN YN+ D++S G + E+
Sbjct: 161 DXELKILDFGLAR---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 316 CCDMPYP 322
+P
Sbjct: 218 TGRTLFP 224
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 189
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+++EY GG L ++ R +++ L +L K I++RD+K EN++L+
Sbjct: 98 LILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
Query: 256 KTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIY 315
VK+ DFG+ + + GT+ YMAPE+L S +NR D +S G ++++
Sbjct: 156 HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215
Query: 316 CCDMPYPDLSFSEVTSAVV--RQNLRPEIPRCCPSSLANVMKR 356
P+ + + ++ + NL P + + L ++KR
Sbjct: 216 TGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKR 258
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 195
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 104 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 161
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 162 QQGYIQVTDFGFAK-------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 214
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 215 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 266
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 189
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 196
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 197
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 227
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 188
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 218
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 195
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+++D
Sbjct: 118 MVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG+A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGLAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 193
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 141 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 199
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 229
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 191
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 196 VVVEYCHGGALKSYLIKNRR------RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
+V+EY GG + S+L + R R A ++V+ YL S +++RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKP 169
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVY 305
EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 306 SFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDAN 361
+ G+ ++E+ P+ P + ++ S VR P S L ++++ +
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVD 276
Query: 362 PDKR 365
KR
Sbjct: 277 LTKR 280
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 123 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 181
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ C + +P + + +
Sbjct: 182 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 241
Query: 333 VVRQ 336
V+ Q
Sbjct: 242 VIEQ 245
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 170
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ C + +P + + +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 230
Query: 333 VVRQ 336
V+ Q
Sbjct: 231 VIEQ 234
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTG----ETGTL 285
+ RGL Y+ S ++HRD+K N+LL+ T +KI DFG+AR+ A HD TG T
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 211
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APE+ LN Y + D++S G L E+
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 111 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 168
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 169 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 221
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 222 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 273
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 54/279 (19%)
Query: 110 GTFGTVHRGIYDGQD---VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G FG V R + D Q VAVK ++ GE+ + +E+ L HPN+
Sbjct: 30 GNFG-VARLMRDKQSNELVAVKYIERGEK----------IDENVKREIINHRSLRHPNIV 78
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRR-----RKLAFK 221
+F + + L +V+EY GG L + R + F+
Sbjct: 79 RFKEVILTPTHL----------------AIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 222 VVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT--VKIADFGVARLEASNPHDMT 279
+I G+SY + ++ HRD+K EN LLD + +KI FG ++ +S H
Sbjct: 123 QLIS-------GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK--SSVLHSQP 173
Query: 280 GET-GTLGYMAPEVLNGSAYNRK-CDVYSFGICLWEIYCCDMPYPD----LSFSEVTSAV 333
T GT Y+APEVL Y+ K DV+S G+ L+ + P+ D +F + +
Sbjct: 174 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
Query: 334 VR-QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 371
+ Q P+ P +++ R + A+P KR + E+
Sbjct: 234 LNVQYAIPDYVHISPEC-RHLISRIFVADPAKRISIPEI 271
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 105 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 162
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 163 EQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 215
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 216 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 267
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 196 VVVEYCHGGALKSYLIKNRR------RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKT 249
+V+EY GG + S+L + R R A ++V+ YL S +++RD+K
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKP 162
Query: 250 ENMLLDKTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVY 305
EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D +
Sbjct: 163 ENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 215
Query: 306 SFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDAN 361
+ G+ ++E+ P+ P + ++ S VR P S L ++++ +
Sbjct: 216 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVD 269
Query: 362 PDKR 365
KR
Sbjct: 270 LTKR 273
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 30/179 (16%)
Query: 218 LAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD 277
L ++VV + + G+ + S I+HRD+K EN+L+ ++ VK+ DFG AR A+
Sbjct: 121 LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180
Query: 278 MTGETGTLGYMAPEVLNGSA-YNRKCDVYSFGICLWEIYCCDMPYP-DLSFSEVTSAVV- 334
E T Y APE+L G Y + DV++ G + E++ + +P D ++ ++
Sbjct: 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMC 240
Query: 335 -------RQNL-----------RPEIPRCCP---------SSLANVMKRCWDANPDKRP 366
Q L PEI P + ++ K+C +PDKRP
Sbjct: 241 LGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+++D
Sbjct: 118 MVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTD 182
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 110/274 (40%), Gaps = 32/274 (11%)
Query: 101 LIIKGAFARGTFGTVHRGIYD--GQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWH 158
++ RG F V + I GQ+ A K L AEI E+AV
Sbjct: 31 ILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEIL-------HEIAVLE 83
Query: 159 KLDH-PNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRK 217
P V TSE+ +++EY GG + S +
Sbjct: 84 LAKSCPRVINLHEVYENTSEI----------------ILILEYAAGGEIFSLCLPELAEM 127
Query: 218 LAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTR---TVKIADFGVARLEASN 274
++ VI+L + G+ YL IVH D+K +N+LL +KI DFG++R + +
Sbjct: 128 VSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR-KIGH 186
Query: 275 PHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVV 334
++ GT Y+APE+LN D+++ GI + + P+ E +
Sbjct: 187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNIS 246
Query: 335 RQNL-RPEIPRCCPSSLA-NVMKRCWDANPDKRP 366
+ N+ E S LA + ++ NP+KRP
Sbjct: 247 QVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRP 280
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL 285
L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR A +MTG T
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVATR 193
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR A
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-- 184
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 185 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR A
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-- 184
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 185 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTD 178
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTD 181
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTD 181
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTD 187
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 188 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+++D
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 30/233 (12%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDG---QDVAVKLLDWGEESHRSEAEIASLRAAF 150
WE+ P +L G +G+V YD Q VAVK L R + R +
Sbjct: 24 WEV-PQRLQGLRPVGSGAYGSVCSA-YDARLRQKVAVKKLS------RPFQSLIHARRTY 75
Query: 151 TQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL 210
+E+ + L H NV + + + +F V + GA + +
Sbjct: 76 -RELRLLKHLKHENVIGLLDVFTPATSIE------------DFSEVYLVTTLMGADLNNI 122
Query: 211 IKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARL 270
+K + L+ + V L L RGL Y+ S I+HRD+K N+ +++ ++I DFG+AR
Sbjct: 123 VKCQ--ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR- 179
Query: 271 EASNPHDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 180 --QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFP 230
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+++ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YQMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 14/169 (8%)
Query: 188 GMPSNF--CCVVVEYCHGGALKSY------LIKNRRRKLAFKVVIQLALDLARGLSYLQS 239
G+ +N+ ++ EY ++ + L KN + +V+ + + SY+ +
Sbjct: 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN 169
Query: 240 KK-IVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVL-NGSA 297
+K I HRDVK N+L+DK VK++DFG + E + G GT +M PE N S+
Sbjct: 170 EKNICHRDVKPSNILMDKNGRVKLSDFGES--EYMVDKKIKGSRGTYEFMPPEFFSNESS 227
Query: 298 YN-RKCDVYSFGICLWEIYCCDMPYP-DLSFSEVTSAVVRQNLRPEIPR 344
YN K D++S GICL+ ++ +P+ +S E+ + + +N+ + R
Sbjct: 228 YNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDR 276
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 214 RRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEAS 273
+ +KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---H 174
Query: 274 NPHDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+E GG L ++ N+R K A + + LA + YL I+HRD+K EN+LL
Sbjct: 97 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLS 154
Query: 256 KTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGI 309
+KI DFG +++ M GT Y+APEVL + YNR D +S G+
Sbjct: 155 SQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 213
Query: 310 CLWEIYCCDMPYPDLSFSEVTSAVVRQ------NLRPEIPRCCPSSLANVMKRCWDANPD 363
L + C YP S ++ Q N PE+ +++K+ +P
Sbjct: 214 IL---FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 270
Query: 364 KRPEMDEVV 372
R +E +
Sbjct: 271 ARFTTEEAL 279
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 23/170 (13%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRC 357
+E+ P+ P + ++ S VR P S L ++++
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNL 272
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+E GG L ++ N+R K A + + LA + YL I+HRD+K EN+LL
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLS 148
Query: 256 KTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGI 309
+KI DFG +++ M GT Y+APEVL + YNR D +S G+
Sbjct: 149 SQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 207
Query: 310 CLWEIYCCDMPYPDLSFSEVTSAVVRQ------NLRPEIPRCCPSSLANVMKRCWDANPD 363
L + C YP S ++ Q N PE+ +++K+ +P
Sbjct: 208 IL---FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 264
Query: 364 KRPEMDEVV 372
R +E +
Sbjct: 265 ARFTTEEAL 273
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+E GG L ++ N+R K A + + LA + YL I+HRD+K EN+LL
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLS 148
Query: 256 KTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGI 309
+KI DFG +++ M GT Y+APEVL + YNR D +S G+
Sbjct: 149 SQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 207
Query: 310 CLWEIYCCDMPYPDLSFSEVTSAVVRQ------NLRPEIPRCCPSSLANVMKRCWDANPD 363
L + C YP S ++ Q N PE+ +++K+ +P
Sbjct: 208 IL---FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 264
Query: 364 KRPEMDEVV 372
R +E +
Sbjct: 265 ARFTTEEAL 273
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+E GG L ++ N+R K A + + LA + YL I+HRD+K EN+LL
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLS 148
Query: 256 KTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGI 309
+KI DFG +++ M GT Y+APEVL + YNR D +S G+
Sbjct: 149 SQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 207
Query: 310 CLWEIYCCDMPYPDLSFSEVTSAVVRQ------NLRPEIPRCCPSSLANVMKRCWDANPD 363
L + C YP S ++ Q N PE+ +++K+ +P
Sbjct: 208 IL---FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 264
Query: 364 KRPEMDEVV 372
R +E +
Sbjct: 265 ARFTTEEAL 273
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 182
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+E GG L ++ N+R K A + + LA + YL I+HRD+K EN+LL
Sbjct: 216 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLS 273
Query: 256 KTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGI 309
+KI DFG +++ M GT Y+APEVL + YNR D +S G+
Sbjct: 274 SQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 332
Query: 310 CLWEIYCCDMPYPDLSFSEVTSAVVRQ------NLRPEIPRCCPSSLANVMKRCWDANPD 363
L + C YP S ++ Q N PE+ +++K+ +P
Sbjct: 333 IL---FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 389
Query: 364 KRPEMDEVV 372
R +E +
Sbjct: 390 ARFTTEEAL 398
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+E GG L ++ N+R K A + + LA + YL I+HRD+K EN+LL
Sbjct: 90 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLS 147
Query: 256 KTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGI 309
+KI DFG +++ M GT Y+APEVL + YNR D +S G+
Sbjct: 148 SQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 206
Query: 310 CLWEIYCCDMPYPDLSFSEVTSAVVRQ------NLRPEIPRCCPSSLANVMKRCWDANPD 363
L + C YP S ++ Q N PE+ +++K+ +P
Sbjct: 207 IL---FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 263
Query: 364 KRPEMDEVV 372
R +E +
Sbjct: 264 ARFTTEEAL 272
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 28/232 (12%)
Query: 94 WEIDPAKLIIKGAFARGTFGTV--HRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFT 151
WE+ P + G +G+V + G +AVK L R I + +
Sbjct: 47 WEV-PERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS------RPFQSIIHAKRTY- 98
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLI 211
+E+ + + H NV + + L D +V + G L + +
Sbjct: 99 RELRLLKHMKHENVIGLLDVFTPATSLEEFND-----------VYLVTHLMGADLNNIV- 146
Query: 212 KNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLE 271
+ +KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 147 --KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 202
Query: 272 ASNPHDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN D++S G + E+ +P
Sbjct: 203 -HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFP 253
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 182
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 21/134 (15%)
Query: 196 VVVEYCHGGALKSYLIKNRR-RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLL 254
+V E GG++ S++ K R +L VV+Q D+A L +L +K I HRD+K EN+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGIAHRDLKPENILC 144
Query: 255 D---KTRTVKIADFGVA---RLEA-----SNPHDMTGETGTLGYMAPEVL-----NGSAY 298
+ + VKI DF + +L S P +T G+ YMAPEV+ S Y
Sbjct: 145 EHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT-PCGSAEYMAPEVVEAFSEEASIY 203
Query: 299 NRKCDVYSFGICLW 312
+++CD++S G+ L+
Sbjct: 204 DKRCDLWSLGVILY 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 199
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 200 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 195
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 243
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 178
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+E GG L ++ N+R K A + + LA + YL I+HRD+K EN+LL
Sbjct: 230 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLS 287
Query: 256 KTR---TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVL---NGSAYNRKCDVYSFGI 309
+KI DFG +++ M GT Y+APEVL + YNR D +S G+
Sbjct: 288 SQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 346
Query: 310 CLWEIYCCDMPYPDLSFSEVTSAVVRQ------NLRPEIPRCCPSSLANVMKRCWDANPD 363
L + C YP S ++ Q N PE+ +++K+ +P
Sbjct: 347 IL---FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 403
Query: 364 KRPEMDEVV 372
R +E +
Sbjct: 404 ARFTTEEAL 412
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 182
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 130 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 186
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 187 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 234
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 196
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFT 151
WE+ P + G +G+V I G+ VA+K L S ++EI + RA
Sbjct: 20 WEL-PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKL-----SRPFQSEIFAKRA--Y 71
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNF--CCVVVEYCHGGALKSY 209
+E+ + + H NV + S L NF +V+ + K
Sbjct: 72 RELLLLKHMQHENVIGLLDVFTPASSLR------------NFYDFYLVMPFMQTDLQKIM 119
Query: 210 LIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR 269
+K K+ + L + +GL Y+ S +VHRD+K N+ +++ +KI DFG+AR
Sbjct: 120 GLKFSEEKIQY-----LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
Query: 270 LEASNPHDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
+ +MTG T Y APEV L+ YN+ D++S G + E+
Sbjct: 175 HADA---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 188
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 188
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 183
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 188
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 181
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 196
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 178
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 119 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 175
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 176 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 223
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 178
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 195
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 243
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 187
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 188 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G+ + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT Y+AP ++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G+ + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 181
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL 285
L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR +MTG T
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 182
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 117 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 173
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 174 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 214 RRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEAS 273
+ +KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+ R
Sbjct: 118 KSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR---H 174
Query: 274 NPHDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL 285
L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR +MTG T
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 182
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 41/241 (17%)
Query: 103 IKGAFARGTFGTVHRGIYDGQDV--AVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
+K G++ R I+ ++ AVK++D + E EI LR
Sbjct: 26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEIL-LRYG----------- 73
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HPN+ L D+G + VV E GG L ++ R++ +
Sbjct: 74 QHPNIIT----------LKDVYDDG------KYVYVVTELMKGGELLDKIL--RQKFFSE 115
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENML-LDKT---RTVKIADFGVAR-LEASNP 275
+ + + + + YL ++ +VHRD+K N+L +D++ +++I DFG A+ L A N
Sbjct: 116 REASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175
Query: 276 HDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY---PDLSFSEVTSA 332
MT T ++APEVL Y+ CD++S G+ L+ + P+ PD + E+ +
Sbjct: 176 LLMT-PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILAR 234
Query: 333 V 333
+
Sbjct: 235 I 235
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 117 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 173
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 174 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 27/221 (12%)
Query: 108 ARGTFGTVHRGIY--DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
+G F V R I GQ AVK++D + + L+ +E ++ H L HP++
Sbjct: 35 GKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK----REASICHMLKHPHI 90
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFK--VV 223
+ L + +G + M V E+ G L ++K + V
Sbjct: 91 VEL---------LETYSSDGMLYM-------VFEFMDGADLCFEIVKRADAGFVYSEAVA 134
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLL---DKTRTVKIADFGVARLEASNPHDMTG 280
+ L Y I+HRDVK +LL + + VK+ FGVA + G
Sbjct: 135 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 194
Query: 281 ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT +MAPEV+ Y + DV+ G+ L+ + +P+
Sbjct: 195 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL 285
L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR +MTG T
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 182
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
Query: 204 GALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKK-IVHRDVKTENMLLDKTRTVKI 262
G L K + + +++ ++ + + + L YL+ K ++HRDVK N+LLD+ +K+
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKL 166
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLN-----GSAYNRKCDVYSFGICLWEIYC 316
DFG++ RL D + G YMAPE ++ Y+ + DV+S GI L E+
Sbjct: 167 CDFGISGRLVDDKAKDRS--AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELAT 224
Query: 317 CDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSS--LANVMKRCWDANPDKRPEMDEVV 372
PY + V Q P +P S + +K C + KRP+ ++++
Sbjct: 225 GQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLL 282
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 122/291 (41%), Gaps = 35/291 (12%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAA 149
Q +E+ L RG +G V R + GQ +AVK + S + + L +
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
+D P F GA ++ I C +++ K
Sbjct: 104 M-------RTVDCPFTVTFYGALFREGDVWI-------------CMELMDTSLDKFYKQV 143
Query: 210 LIKNRRRKLAFKVVIQLALDLARGLSYLQSK-KIVHRDVKTENMLLDKTRTVKIADFGVA 268
+ ++ + + ++ ++A+ + + L +L SK ++HRDVK N+L++ VK+ DFG++
Sbjct: 144 I--DKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
Query: 269 RLEASNPHDMTGETGTLGYMAPE----VLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD- 323
+ T + G YMAPE LN Y+ K D++S GI + E+ PY
Sbjct: 202 GYLVDSVAK-TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 260
Query: 324 -LSFSEVTSAVVRQNLRPEIPRCCPSS-LANVMKRCWDANPDKRPEMDEVV 372
F ++ V + P++P S+ + +C N +RP E++
Sbjct: 261 GTPFQQLKQVV--EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 118 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 174
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 175 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 222
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 27/221 (12%)
Query: 108 ARGTFGTVHRGIY--DGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNV 165
+G F V R I GQ AVK++D + + L+ +E ++ H L HP++
Sbjct: 33 GKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK----REASICHMLKHPHI 88
Query: 166 TKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFK--VV 223
+ L + +G + M V E+ G L ++K + V
Sbjct: 89 VEL---------LETYSSDGMLYM-------VFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLL---DKTRTVKIADFGVARLEASNPHDMTG 280
+ L Y I+HRDVK +LL + + VK+ FGVA + G
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 192
Query: 281 ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT +MAPEV+ Y + DV+ G+ L+ + +P+
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 120/305 (39%), Gaps = 36/305 (11%)
Query: 107 FARGTFGTVHRGIYDG--QDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
+G F V R + Q+ A K+++ + S R ++ +E + L HPN
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKL-------EREARICRLLKHPN 91
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
+ + + ++ G F +V + GG L ++ R +
Sbjct: 92 IVRLHDSI---------SEEG-------FHYLVFDLVTGGELFEDIVA--REYYSEADAS 133
Query: 225 QLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFGVARLEASNPHDMTGE 281
+ ++++ IVHRD+K EN+LL K VK+ADFG+A G
Sbjct: 134 HCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGF 193
Query: 282 TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD---LSFSEVTSAVVRQNL 338
GT GY++PEVL Y + D+++ G+ L+ + P+ D + A
Sbjct: 194 AGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFP 253
Query: 339 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMIPVDQPQGCSCF 398
PE P + N++ + NP KR D+ + S M+ + + C
Sbjct: 254 SPEWDTVTPEA-KNLINQMLTINPAKRITADQALKHPWVCQRSTVASMM--HRQETVECL 310
Query: 399 RKYRG 403
RK+
Sbjct: 311 RKFNA 315
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 30/233 (12%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGIYDG---QDVAVKLLDWGEESHRSEAEIASLRAAF 150
WE+ P +L G +G+V YD Q VAVK L R + R +
Sbjct: 16 WEV-PQRLQGLRPVGSGAYGSVCSA-YDARLRQKVAVKKLS------RPFQSLIHARRTY 67
Query: 151 TQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYL 210
+E+ + L H NV + + + +F V + GA + +
Sbjct: 68 -RELRLLKHLKHENVIGLLDVFTPATSIE------------DFSEVYLVTTLMGADLNNI 114
Query: 211 IKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARL 270
+K + L+ + V L L RGL Y+ S I+HRD+K N+ +++ ++I DFG+AR
Sbjct: 115 VKCQ--ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR- 171
Query: 271 EASNPHDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 172 --QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFP 222
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 29/243 (11%)
Query: 105 GAFARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDH 162
G G++G V R GQ VA+K E+ ++ +E+ + +L H
Sbjct: 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDD-------PVIKKIALREIRMLKQLKH 61
Query: 163 PNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKV 222
PN+ + L++ V EYC L + +R + +
Sbjct: 62 PNLVNLLEVFRRKRRLHL----------------VFEYCDHTVLHE--LDRYQRGVPEHL 103
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET 282
V + + +++ +HRDVK EN+L+ K +K+ DFG ARL E
Sbjct: 104 VKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV 163
Query: 283 GTLGYMAPEVLNG-SAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPE 341
T Y +PE+L G + Y DV++ G E+ +P S + ++R+ L
Sbjct: 164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD-QLYLIRKTLGDL 222
Query: 342 IPR 344
IPR
Sbjct: 223 IPR 225
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 111 VIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TA 169
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
Query: 333 VVRQ 336
V+ Q
Sbjct: 230 VIEQ 233
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT E T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 177 GTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV + ++ HPN+ T+ N +TD +++E GG L
Sbjct: 59 REEIEREVNILREIRHPNII-----TLHDIFEN-KTD----------VVLILELVSGGEL 102
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTR---TVKI 262
+L + + L Q + G+ YL SK+I H D+K EN MLLDK +K+
Sbjct: 103 FDFLAE--KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL 160
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A ++EA N + GT ++APE++N + D++S G+ + + P+
Sbjct: 161 IDFGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 322 PDLSFSEVTSAV--VRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+ E + + V + E + ++R +P +R
Sbjct: 219 LGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR 264
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA-RLEASNPHDMTGETGTL 285
A ++ GL ++ ++ +V+RD+K N+LLD+ V+I+D G+A PH GT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 286 GYMAPEVLN-GSAYNRKCDVYSFGICLWEIYCCDMPY 321
GYMAPEVL G AY+ D +S G L+++ P+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA-RLEASNPHDMTGETGTL 285
A ++ GL ++ ++ +V+RD+K N+LLD+ V+I+D G+A PH GT
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 353
Query: 286 GYMAPEVLN-GSAYNRKCDVYSFGICLWEIYCCDMPY 321
GYMAPEVL G AY+ D +S G L+++ P+
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV + ++ HPN+ T+ N +TD +++E GG L
Sbjct: 73 REEIEREVNILREIRHPNII-----TLHDIFEN-KTD----------VVLILELVSGGEL 116
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTR---TVKI 262
+L + + L Q + G+ YL SK+I H D+K EN MLLDK +K+
Sbjct: 117 FDFLAE--KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL 174
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A ++EA N + GT ++APE++N + D++S G+ + + P+
Sbjct: 175 IDFGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
Query: 322 PDLSFSEVTSAV--VRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+ E + + V + E + ++R +P +R
Sbjct: 233 LGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR 278
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA-RLEASNPHDMTGETGTL 285
A ++ GL ++ ++ +V+RD+K N+LLD+ V+I+D G+A PH GT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 286 GYMAPEVLN-GSAYNRKCDVYSFGICLWEIYCCDMPY 321
GYMAPEVL G AY+ D +S G L+++ P+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 227 ALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVA-RLEASNPHDMTGETGTL 285
A ++ GL ++ ++ +V+RD+K N+LLD+ V+I+D G+A PH GT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 286 GYMAPEVLN-GSAYNRKCDVYSFGICLWEIYCCDMPY 321
GYMAPEVL G AY+ D +S G L+++ P+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 23/178 (12%)
Query: 196 VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLD 255
+V+EY GG + S+L R + + A + YL S +++RD+K EN+L+D
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 256 KTRTVKIADFGVARLEASNPHDMTGET----GTLGYMAPEVLNGSAYNRKCDVYSFGICL 311
+ +++ DFG A+ + G T GT +APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLI 228
Query: 312 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 365
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 25/180 (13%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV + ++ HPN+ T+ N +TD +++E GG L
Sbjct: 52 REEIEREVNILREIRHPNII-----TLHDIFEN-KTD----------VVLILELVSGGEL 95
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTR---TVKI 262
+L + + L Q + G+ YL SK+I H D+K EN MLLDK +K+
Sbjct: 96 FDFLAE--KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL 153
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A ++EA N + GT ++APE++N + D++S G+ + + P+
Sbjct: 154 IDFGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI D+G+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 29/178 (16%)
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F QE+ + LDHPN+ + DN I +V+E C GG L
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETF---------EDNTDI-------YLVMELCTGGELFER 113
Query: 210 LIKNR--RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLL---DKTRTVKIAD 264
++ R R A +++ D+ ++Y + HRD+K EN L +K+ D
Sbjct: 114 VVHKRVFRESDAARIM----KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLID 169
Query: 265 FGV-ARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
FG+ AR + M + GT Y++P+VL G Y +CD +S G+ ++ + C P+
Sbjct: 170 FGLAARFKPGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 233 GLSYLQSKKIVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPE 291
+ + S+ +VHRD+K EN+L+D R K+ DFG L P+ T GT Y PE
Sbjct: 151 AIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY--TDFDGTRVYSPPE 208
Query: 292 VLNGSAYNR-KCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI---PRCCP 347
++ Y+ V+S GI L+++ C D+P+ E ++ L P CC
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGDIPF------ERDQEILEAELHFPAHVSPDCC- 261
Query: 348 SSLANVMKRCWDANPDKRPEMDEVV 372
+++RC P RP ++E++
Sbjct: 262 ----ALIRRCLAPKPSSRPSLEEIL 282
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 29/178 (16%)
Query: 150 FTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSY 209
F QE+ + LDHPN+ + DN I + V+E C GG L
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETF---------EDNTDIYL-------VMELCTGGELFER 96
Query: 210 LIKNR--RRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLL---DKTRTVKIAD 264
++ R R A +++ D+ ++Y + HRD+K EN L +K+ D
Sbjct: 97 VVHKRVFRESDAARIM----KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLID 152
Query: 265 FGV-ARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
FG+ AR + M + GT Y++P+VL G Y +CD +S G+ ++ + C P+
Sbjct: 153 FGLAARFKPGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 196
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+M G T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 197 DEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 94 WEIDPAKLIIKGAFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFT 151
WE+ P + G +G+V I G+ VA+K L S ++EI + RA
Sbjct: 38 WEL-PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKL-----SRPFQSEIFAKRA--Y 89
Query: 152 QEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNF--CCVVVEYCHGGALKSY 209
+E+ + + H NV + S L NF +V+ + K
Sbjct: 90 RELLLLKHMQHENVIGLLDVFTPASSLR------------NFYDFYLVMPFMQTDLQKIM 137
Query: 210 LIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVAR 269
++ K+ + L + +GL Y+ S +VHRD+K N+ +++ +KI DFG+AR
Sbjct: 138 GMEFSEEKIQY-----LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192
Query: 270 LEASNPHDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
+ +MTG T Y APEV L+ YN+ D++S G + E+
Sbjct: 193 HADA---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 235
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 32/223 (14%)
Query: 107 FARGTFGTVHR--GIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
+G F V R I GQ+ A K+++ + S R ++ +E + L HPN
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKL-------EREARICRLLKHPN 64
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA-FKVV 223
+ + + ++ G F +V + GG L ++ A
Sbjct: 65 IVRLHDSI---------SEEG-------FHYLVFDLVTGGELFEDIVAREYYSEADASHC 108
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLL---DKTRTVKIADFGVARLEASNPHDMTG 280
IQ L+ +++ IVHRD+K EN+LL K VK+ADFG+A + G
Sbjct: 109 IQQILE---SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 281 ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD 323
GT GY++PEVL Y + D+++ G+ L+ + P+ D
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 44/232 (18%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQDV--AVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
++K G++ R ++ ++ AVK++D + E EI LR
Sbjct: 30 VVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL-LRYG---------- 78
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR---RR 216
HPN+ ++ D H+ +V E GG L +++ + R
Sbjct: 79 -QHPNIITL---------KDVYDDGKHV-------YLVTELMRGGELLDKILRQKFFSER 121
Query: 217 KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENML-LDKT---RTVKIADFGVAR-LE 271
+ +F + + + + YL S+ +VHRD+K N+L +D++ ++I DFG A+ L
Sbjct: 122 EASF-----VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR 176
Query: 272 ASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD 323
A N MT T ++APEVL Y+ CD++S GI L+ + P+ +
Sbjct: 177 AENGLLMT-PCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 101/249 (40%), Gaps = 31/249 (12%)
Query: 103 IKGAFARGTFGTVHRGIYDGQD--VAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I RG FG V D A+K+L+ E R+E A F +E V
Sbjct: 78 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAET------ACFREERDVLVNG 131
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
D +T T Q DN +V++Y GG L + L K R
Sbjct: 132 DSKWIT--------TLHYAFQDDNN--------LYLVMDYYVGGDLLTLLSKFEDRLPEE 175
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFG-VARLEASNPHDMT 279
LA ++ + + VHRD+K +N+L+D +++ADFG +L +
Sbjct: 176 MARFYLA-EMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS 234
Query: 280 GETGTLGYMAPEVLNG-----SAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVV 334
GT Y++PE+L Y +CD +S G+C++E+ + P+ S E ++
Sbjct: 235 VAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
Query: 335 RQNLRPEIP 343
R + P
Sbjct: 295 NHKERFQFP 303
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 44/232 (18%)
Query: 102 IIKGAFARGTFGTVHRGIYDGQDV--AVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHK 159
++K G++ R ++ ++ AVK++D + E EI LR
Sbjct: 30 VVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL-LRYG---------- 78
Query: 160 LDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNR---RR 216
HPN+ ++ D H+ +V E GG L +++ + R
Sbjct: 79 -QHPNIITL---------KDVYDDGKHV-------YLVTELMRGGELLDKILRQKFFSER 121
Query: 217 KLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENML-LDKT---RTVKIADFGVAR-LE 271
+ +F + + + + YL S+ +VHRD+K N+L +D++ ++I DFG A+ L
Sbjct: 122 EASF-----VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR 176
Query: 272 ASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD 323
A N MT T ++APEVL Y+ CD++S GI L+ + P+ +
Sbjct: 177 AENGLLMT-PCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 107 FARGTFGTVH--RGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
RG +G V R + GQ +AVK + S + + L + +D P
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM-------RTVDCPF 67
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVI 224
F GA ++ I C +++ K + ++ + + ++
Sbjct: 68 TVTFYGALFREGDVWI-------------CMELMDTSLDKFYKQVI--DKGQTIPEDILG 112
Query: 225 QLALDLARGLSYLQSK-KIVHRDVKTENMLLDKTRTVKIADFGVA-RLEASNPHDMTGET 282
++A+ + + L +L SK ++HRDVK N+L++ VK+ DFG++ L D+ +
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI--DA 170
Query: 283 GTLGYMAPE----VLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD--LSFSEVTSAVVRQ 336
G YMAPE LN Y+ K D++S GI + E+ PY F ++ V +
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV--E 228
Query: 337 NLRPEIPRCCPSS-LANVMKRCWDANPDKRPEMDEVV 372
P++P S+ + +C N +RP E++
Sbjct: 229 EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 199
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+M G T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 200 DEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 32/223 (14%)
Query: 107 FARGTFGTVHR--GIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
+G F V R I GQ+ A K+++ + S R ++ +E + L HPN
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKL-------EREARICRLLKHPN 64
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA-FKVV 223
+ + + ++ G F +V + GG L ++ A
Sbjct: 65 IVRLHDSI---------SEEG-------FHYLVFDLVTGGELFEDIVAREYYSEADASHC 108
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLL---DKTRTVKIADFGVARLEASNPHDMTG 280
IQ L+ +++ IVHRD+K EN+LL K VK+ADFG+A + G
Sbjct: 109 IQQILE---SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 281 ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD 323
GT GY++PEVL Y + D+++ G+ L+ + P+ D
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+M G T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+M G T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 222 VVIQLALDLARGLSYLQSKKIVHRDVKTENMLL---DKTRTVKIADFGVARLEASNPHDM 278
+VIQ L + YL IVHRD+K EN+L ++ + I DFG++++E + M
Sbjct: 110 LVIQQVLS---AVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI--M 164
Query: 279 TGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
+ GT GY+APEVL Y++ D +S G+ + + C P+
Sbjct: 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 170
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
Query: 333 VVRQ 336
V+ Q
Sbjct: 231 VIEQ 234
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 177
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
Query: 333 VVRQ 336
V+ Q
Sbjct: 238 VIEQ 241
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 111 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 169
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
Query: 333 VVRQ 336
V+ Q
Sbjct: 230 VIEQ 233
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL 285
L + RGL Y+ S I+HRD+K N+ +++ +KI DFG+AR +M G T
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATR 182
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 117 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 175
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 176 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 235
Query: 333 VVRQ 336
V+ Q
Sbjct: 236 VIEQ 239
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 170
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
Query: 333 VVRQ 336
V+ Q
Sbjct: 231 VIEQ 234
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 177
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
Query: 333 VVRQ 336
V+ Q
Sbjct: 238 VIEQ 241
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 156 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 214
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
Query: 333 VVRQ 336
V+ Q
Sbjct: 275 VIEQ 278
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
GT+GTV + V L + R + + + ++ +E+ + +L H N+ +
Sbjct: 13 GTYGTVFKAKNRETHEIVAL-----KRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALD 229
+L + V E+C LK Y + L ++V
Sbjct: 68 DVLHSDKKLTL----------------VFEFCDQD-LKKYF-DSCNGDLDPEIVKSFLFQ 109
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMA 289
L +GL + S+ ++HRD+K +N+L+++ +K+ADFG+AR + E TL Y
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRP 169
Query: 290 PEVLNGSA-YNRKCDVYSFGICLWEI 314
P+VL G+ Y+ D++S G E+
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 156 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 214
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
Query: 333 VVRQ 336
V+ Q
Sbjct: 275 VIEQ 278
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI FG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 25/230 (10%)
Query: 148 AAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALK 207
A +E+ + +L H NV + + + + +V+EYC G ++
Sbjct: 51 ANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY--------------MVMEYCVCG-MQ 95
Query: 208 SYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
L ++ L GL YL S+ IVH+D+K N+LL T+KI+ GV
Sbjct: 96 EMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGV 155
Query: 268 ARLEASNPH--DMTGET--GTLGYMAPEVLNG--SAYNRKCDVYSFGICLWEIYCCDMPY 321
A EA +P D T T G+ + PE+ NG + K D++S G+ L+ I P+
Sbjct: 156 A--EALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 371
+ ++ + + + IP C L++++K + P KR + ++
Sbjct: 214 EGDNIYKLFENIGKGSY--AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQI 261
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI DF +AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 9/168 (5%)
Query: 242 IVHRDVKTENMLLD---KTRTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAY 298
+VHRD+K EN+LL K VK+ADFG+A + G GT GY++PEVL AY
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAY 183
Query: 299 NRKCDVYSFGICLWEIYCCDMPYPD---LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMK 355
+ D+++ G+ L+ + P+ D + A PE P + N++
Sbjct: 184 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEA-KNLIN 242
Query: 356 RCWDANPDKRPEMDEVVAMLEAIDTSKGGGMIPVDQPQGCSCFRKYRG 403
+ NP KR E + S M+ + + C +K+
Sbjct: 243 QMLTINPAKRITAHEALKHPWVCQRSTVASMM--HRQETVECLKKFNA 288
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYM 288
D L++L S+ +VH DVK N+ L K+ DFG+ +E + G YM
Sbjct: 165 DTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLL-VELGTAGAGEVQEGDPRYM 223
Query: 289 APEVLNGSAYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVTSAVVRQNLRPEIPRCCP 347
APE+L GS Y DV+S G+ + E+ C ++P+ + ++ L PE
Sbjct: 224 APELLQGS-YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY----LPPEFTAGLS 278
Query: 348 SSLANVMKRCWDANPDKRPEMDEVVAM 374
S L +V+ + +P R + ++A+
Sbjct: 279 SELRSVLVMMLEPDPKLRATAEALLAL 305
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 177
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 237
Query: 333 VVRQ 336
V+ Q
Sbjct: 238 VIEQ 241
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 192 NFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN 251
N +V++Y GG L + L+ KL + ++ + + VHRD+K +N
Sbjct: 163 NHLYLVMDYYVGGDLLT-LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDN 221
Query: 252 MLLDKTRTVKIADFG-VARLEASNPHDMTGETGTLGYMAPEVLNG-----SAYNRKCDVY 305
+LLD +++ADFG ++ + GT Y++PE+L Y +CD +
Sbjct: 222 VLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWW 281
Query: 306 SFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 343
S G+C++E+ + P+ S E ++ R + P
Sbjct: 282 SLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 319
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI D G+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 176
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
MT T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 333 VVRQ 336
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 192 NFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN 251
N +V++Y GG L + L+ KL + ++ + + VHRD+K +N
Sbjct: 147 NHLYLVMDYYVGGDLLT-LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDN 205
Query: 252 MLLDKTRTVKIADFG-VARLEASNPHDMTGETGTLGYMAPEVLNG-----SAYNRKCDVY 305
+LLD +++ADFG ++ + GT Y++PE+L Y +CD +
Sbjct: 206 VLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWW 265
Query: 306 SFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 343
S G+C++E+ + P+ S E ++ R + P
Sbjct: 266 SLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 303
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI D G+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 21/134 (15%)
Query: 196 VVVEYCHGGALKSYLIKNRR--RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENML 253
+V E GG++ +++ K + + A +VV D+A L +L +K I HRD+K EN+L
Sbjct: 88 LVFEKLQGGSILAHIQKQKHFNEREASRVV----RDVAAALDFLHTKGIAHRDLKPENIL 143
Query: 254 L---DKTRTVKIADF----GVARLEASNP---HDMTGETGTLGYMAPEVL-----NGSAY 298
+K VKI DF G+ + P ++T G+ YMAPEV+ + Y
Sbjct: 144 CESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFY 203
Query: 299 NRKCDVYSFGICLW 312
+++CD++S G+ L+
Sbjct: 204 DKRCDLWSLGVVLY 217
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VI + LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR +
Sbjct: 116 VIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI 314
+N MT T Y APEV+ G Y D++S G + E+
Sbjct: 176 TN-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL 216
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 193 FCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENM 252
+ VV E GG L ++ R++ + + + + + + YL ++ +VHRD+K N+
Sbjct: 90 YVYVVTELXKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNI 147
Query: 253 L-LDKT---RTVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFG 308
L +D++ +++I DFG A+ + + T ++APEVL Y+ CD++S G
Sbjct: 148 LYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLG 207
Query: 309 ICLWEIYCCDMPY---PDLSFSEVTSAV 333
+ L+ P+ PD + E+ + +
Sbjct: 208 VLLYTXLTGYTPFANGPDDTPEEILARI 235
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 216 RKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNP 275
+KL V L + RGL Y+ S I+HRD+K N+ +++ +KI D G+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTD 176
Query: 276 HDMTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
+MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 211 IKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARL 270
I + + L + V L RGL Y+ S +++HRD+K N+L+++ +KI DFG+AR
Sbjct: 149 IIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARG 208
Query: 271 EASNPHD----MTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
++P + MT T Y APE+ L+ Y + D++S G E+ +P
Sbjct: 209 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP 265
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
GT+GTV + V L + R + + + ++ +E+ + +L H N+ +
Sbjct: 13 GTYGTVFKAKNRETHEIVAL-----KRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALD 229
+L + V E+C LK Y + L ++V
Sbjct: 68 DVLHSDKKLTL----------------VFEFCDQD-LKKYF-DSCNGDLDPEIVKSFLFQ 109
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTLGYMA 289
L +GL + S+ ++HRD+K +N+L+++ +K+A+FG+AR + E TL Y
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRP 169
Query: 290 PEVLNGSA-YNRKCDVYSFGICLWEI 314
P+VL G+ Y+ D++S G E+
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 211 IKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARL 270
I + + L + V L RGL Y+ S +++HRD+K N+L+++ +KI DFG+AR
Sbjct: 148 IIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207
Query: 271 EASNPHD----MTGETGTLGYMAPEV-LNGSAYNRKCDVYSFGICLWEIYCCDMPYP 322
++P + MT T Y APE+ L+ Y + D++S G E+ +P
Sbjct: 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP 264
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 36/220 (16%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 43 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 95
Query: 167 KFIGATMGTSELNIQTDNG-HIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K Q D + G+ Y G L Y+ R+ +F
Sbjct: 96 KLY--------FTFQDDEKLYFGL---------SYAKNGCLLKYI----RKIGSFDETCT 134
Query: 226 --LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET- 282
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ + +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
Query: 283 -GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + ++ D+++ G ++++ P+
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 32/223 (14%)
Query: 107 FARGTFGTVHR--GIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
+G F V R + GQ+ A K+++ + S R ++ +E + L HPN
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKL-------EREARICRLLKHPN 82
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA-FKVV 223
+ + + ++ GH ++ + GG L ++ A
Sbjct: 83 IVRLHDSI---------SEEGH-------HYLIFDLVTGGELFEDIVAREYYSEADASHC 126
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFGVARLEASNPHDMTG 280
IQ L+ + + +VHRD+K EN+LL K VK+ADFG+A G
Sbjct: 127 IQQILE---AVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 183
Query: 281 ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD 323
GT GY++PEVL Y + D+++ G+ L+ + P+ D
Sbjct: 184 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD 226
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 192 NFCCVVVEYCHGGALKSYLIKNRRRKLA-----FKVVIQLALDLARGLSYLQSKKIVHRD 246
N+ +V+EY GG L + L K R A + I +A+D L Y VHRD
Sbjct: 134 NYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY------VHRD 187
Query: 247 VKTENMLLDKTRTVKIADFG-VARLEASNPHDMTGETGTLGYMAPEVLNGSAYNR----- 300
+K +N+LLD+ +++ADFG +L A GT Y++PE+L
Sbjct: 188 IKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSY 247
Query: 301 --KCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 343
+CD ++ G+ +E++ P+ S +E +V +P
Sbjct: 248 GPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLP 292
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VIQ+ LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR A
Sbjct: 120 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 178
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 332
M T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 179 GTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 238
Query: 333 VVRQ 336
V+ Q
Sbjct: 239 VIEQ 242
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 23/179 (12%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPN+ +++ +++E GG L
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDV----------------VLILELVSGGEL 102
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTRT---VKI 262
+L + + L+ + + G++YL +KKI H D+K EN MLLDK +K+
Sbjct: 103 FDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 263 ADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A E + + GT ++APE++N + D++S G+ + + P+
Sbjct: 161 IDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 43 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 95
Query: 167 KFIGATMGTSELNIQTDNG-HIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K Q D + G+ Y G L Y+ R+ +F
Sbjct: 96 KLY--------FTFQDDEKLYFGL---------SYAKNGELLKYI----RKIGSFDETCT 134
Query: 226 --LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE-- 281
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 282 TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPNV T+ N +TD +++E GG L
Sbjct: 58 REDIEREVSILKEIQHPNVI-----TLHEVYEN-KTD----------VILILELVAGGEL 101
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTRT---VKI 262
+L + + L + + + G+ YL S +I H D+K EN MLLD+ +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A +++ N + GT ++APE++N + D++S G+ + + P+
Sbjct: 160 IDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 365
+ E + V N E S+LA + ++R +P KR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 223 VIQLALDLAR----------GLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA 272
VI + LD R G+ +L S I+HRD+K N+++ T+KI DFG+AR
Sbjct: 118 VIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 177
Query: 273 SNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEI 314
+N MT T Y APEV+ G Y D++S G + E+
Sbjct: 178 TN-FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGEL 218
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 34/219 (15%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 21 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 73
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ- 225
K +L + G+ Y G L Y+ R+ +F
Sbjct: 74 KLYFTFQDDEKL-------YFGL---------SYAKNGELLKYI----RKIGSFDETCTR 113
Query: 226 -LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE--T 282
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 114 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 173
Query: 283 GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 174 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 194 CCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-M 252
+++E GG L +L ++ L+ + + G++YL +KKI H D+K EN M
Sbjct: 90 VVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 253 LLDKTRT---VKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
LLDK +K+ DFG+A E + + GT ++APE++N + D++S G+
Sbjct: 148 LLDKNIPIPHIKLIDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 310 CLWEIYCCDMPY 321
+ + P+
Sbjct: 207 ITYILLSGASPF 218
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 36/220 (16%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 44 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 96
Query: 167 KFIGATMGTSELNIQTDNG-HIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K Q D + G+ Y G L Y+ R+ +F
Sbjct: 97 KLY--------FTFQDDEKLYFGL---------SYAKNGELLKYI----RKIGSFDETCT 135
Query: 226 --LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET- 282
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ + +
Sbjct: 136 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 283 -GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 36/220 (16%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 41 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 93
Query: 167 KFIGATMGTSELNIQTDNG-HIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K Q D + G+ Y G L Y+ R+ +F
Sbjct: 94 KLY--------FTFQDDEKLYFGL---------SYAKNGELLKYI----RKIGSFDETCT 132
Query: 226 --LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEA--SNPHDMTGE 281
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ + S
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 282 TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 34/219 (15%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 20 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 72
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ- 225
K +L + G+ Y G L Y+ R+ +F
Sbjct: 73 KLYFTFQDDEKL-------YFGL---------SYAKNGELLKYI----RKIGSFDETCTR 112
Query: 226 -LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE--T 282
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 113 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 172
Query: 283 GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 173 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ +A +E+ + KLDH N+ +
Sbjct: 31 GSFGVVYQA---------KLCDSGELV--AIKKVLQGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 80 YFFYSSGE---KKDEVYLNL-------VLDYVPATVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY 187
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPNV T+ N +TD +++E GG L
Sbjct: 58 REDIEREVSILKEIQHPNVI-----TLHEVYEN-KTD----------VILILELVAGGEL 101
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTRT---VKI 262
+L + + L + + + G+ YL S +I H D+K EN MLLD+ +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A +++ N + GT ++APE++N + D++S G+ + + P+
Sbjct: 160 IDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 365
+ E + V N E S+LA + ++R +P KR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPNV T+ N +TD +++E GG L
Sbjct: 58 REDIEREVSILKEIQHPNVI-----TLHEVYEN-KTD----------VILILELVAGGEL 101
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTRT---VKI 262
+L + + L + + + G+ YL S +I H D+K EN MLLD+ +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A +++ N + GT ++APE++N + D++S G+ + + P+
Sbjct: 160 IDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 365
+ E + V N E S+LA + ++R +P KR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 34/219 (15%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 19 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 71
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ- 225
K +L + G+ Y G L Y+ R+ +F
Sbjct: 72 KLYFTFQDDEKL-------YFGL---------SYAKNGELLKYI----RKIGSFDETCTR 111
Query: 226 -LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE--T 282
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 112 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 171
Query: 283 GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 172 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPNV T+ N +TD +++E GG L
Sbjct: 57 REDIEREVSILKEIQHPNVI-----TLHEVYEN-KTD----------VILILELVAGGEL 100
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTRT---VKI 262
+L + + L + + + G+ YL S +I H D+K EN MLLD+ +KI
Sbjct: 101 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 158
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A +++ N + GT ++APE++N + D++S G+ + + P+
Sbjct: 159 IDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 365
+ E + V N E S+LA + ++R +P KR
Sbjct: 217 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 262
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPNV T+ N +TD +++E GG L
Sbjct: 57 REDIEREVSILKEIQHPNVI-----TLHEVYEN-KTD----------VILILELVAGGEL 100
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTRT---VKI 262
+L + + L + + + G+ YL S +I H D+K EN MLLD+ +KI
Sbjct: 101 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 158
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A +++ N + GT ++APE++N + D++S G+ + + P+
Sbjct: 159 IDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 365
+ E + V N E S+LA + ++R +P KR
Sbjct: 217 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 262
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPNV T+ N +TD +++E GG L
Sbjct: 58 REDIEREVSILKEIQHPNVI-----TLHEVYEN-KTD----------VILILELVAGGEL 101
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTRT---VKI 262
+L + + L + + + G+ YL S +I H D+K EN MLLD+ +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A +++ N + GT ++APE++N + D++S G+ + + P+
Sbjct: 160 IDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 365
+ E + V N E S+LA + ++R +P KR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 34/219 (15%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 18 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 70
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ- 225
K +L + G+ Y G L Y+ R+ +F
Sbjct: 71 KLYFTFQDDEKL-------YFGL---------SYAKNGELLKYI----RKIGSFDETCTR 110
Query: 226 -LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE--T 282
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 111 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 170
Query: 283 GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPNV T+ N +TD +++E GG L
Sbjct: 58 REDIEREVSILKEIQHPNVI-----TLHEVYEN-KTD----------VILILELVAGGEL 101
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTRT---VKI 262
+L + + L + + + G+ YL S +I H D+K EN MLLD+ +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A +++ N + GT ++APE++N + D++S G+ + + P+
Sbjct: 160 IDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 365
+ E + V N E S+LA + ++R +P KR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPNV T+ N +TD +++E GG L
Sbjct: 58 REDIEREVSILKEIQHPNVI-----TLHEVYEN-KTD----------VILILELVAGGEL 101
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTRT---VKI 262
+L + + L + + + G+ YL S +I H D+K EN MLLD+ +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A +++ N + GT ++APE++N + D++S G+ + + P+
Sbjct: 160 IDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 365
+ E + V N E S+LA + ++R +P KR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPNV T+ N +TD +++E GG L
Sbjct: 58 REDIEREVSILKEIQHPNVI-----TLHEVYEN-KTD----------VILILELVAGGEL 101
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTRT---VKI 262
+L + + L + + + G+ YL S +I H D+K EN MLLD+ +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A +++ N + GT ++APE++N + D++S G+ + + P+
Sbjct: 160 IDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 365
+ E + V N E S+LA + ++R +P KR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 194 CCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-M 252
+++E GG L +L + + L+ + + G++YL +KKI H D+K EN M
Sbjct: 90 VVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 253 LLDKTRT---VKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
LLDK +K+ DFG+A E + + GT ++APE++N + D++S G+
Sbjct: 148 LLDKNIPIPHIKLIDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 310 CLWEIYCCDMPY 321
+ + P+
Sbjct: 207 ITYILLSGASPF 218
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPNV T+ N +TD +++E GG L
Sbjct: 58 REDIEREVSILKEIQHPNVI-----TLHEVYEN-KTD----------VILILELVAGGEL 101
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTR---TVKI 262
+L + + L + + + G+ YL S +I H D+K EN MLLD+ +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A +++ N + GT ++APE++N + D++S G+ + + P+
Sbjct: 160 IDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 365
+ E + V N E S+LA + ++R +P KR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPNV T+ N +TD +++E GG L
Sbjct: 58 REDIEREVSILKEIQHPNVI-----TLHEVYEN-KTD----------VILILELVAGGEL 101
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTR---TVKI 262
+L + + L + + + G+ YL S +I H D+K EN MLLD+ +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A +++ N + GT ++APE++N + D++S G+ + + P+
Sbjct: 160 IDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 365
+ E + V N E S+LA + ++R +P KR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 43 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 95
Query: 167 KFIGATMGTSELNIQTDNG-HIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K Q D + G+ Y G L Y+ R+ +F
Sbjct: 96 KLY--------FTFQDDEKLYFGL---------SYAKNGELLKYI----RKIGSFDETCT 134
Query: 226 --LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE-- 281
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 282 TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 44 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 96
Query: 167 KFIGATMGTSELNIQTDNG-HIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K Q D + G+ Y G L Y+ R+ +F
Sbjct: 97 KLY--------FTFQDDEKLYFGL---------SYAKNGELLKYI----RKIGSFDETCT 135
Query: 226 --LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE-- 281
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 136 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 282 TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 41 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 93
Query: 167 KFIGATMGTSELNIQTDNG-HIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K Q D + G+ Y G L Y+ R+ +F
Sbjct: 94 KLY--------FTFQDDEKLYFGL---------SYAKNGELLKYI----RKIGSFDETCT 132
Query: 226 --LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE-- 281
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 282 TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 41 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 93
Query: 167 KFIGATMGTSELNIQTDNG-HIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K Q D + G+ Y G L Y+ R+ +F
Sbjct: 94 KLY--------FTFQDDEKLYFGL---------SYAKNGELLKYI----RKIGSFDETCT 132
Query: 226 --LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE-- 281
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 282 TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 194 CCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-M 252
+++E GG L +L + + L+ + + G++YL +KKI H D+K EN M
Sbjct: 90 VVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 253 LLDKTRT---VKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
LLDK +K+ DFG+A E + + GT ++APE++N + D++S G+
Sbjct: 148 LLDKNIPIPHIKLIDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 310 CLWEIYCCDMPY 321
+ + P+
Sbjct: 207 ITYILLSGASPF 218
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 46 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 98
Query: 167 KFIGATMGTSELNIQTDNG-HIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K Q D + G+ Y G L Y+ R+ +F
Sbjct: 99 KLY--------FTFQDDEKLYFGL---------SYAKNGELLKYI----RKIGSFDETCT 137
Query: 226 --LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE-- 281
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 138 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 282 TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 43 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 95
Query: 167 KFIGATMGTSELNIQTDNG-HIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K Q D + G+ Y G L Y+ R+ +F
Sbjct: 96 KLY--------FTFQDDEKLYFGL---------SYAKNGELLKYI----RKIGSFDETCT 134
Query: 226 --LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE-- 281
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 282 TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPNV T+ N +TD +++E GG L
Sbjct: 58 REDIEREVSILKEIQHPNVI-----TLHEVYEN-KTD----------VILILELVAGGEL 101
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTR---TVKI 262
+L + + L + + + G+ YL S +I H D+K EN MLLD+ +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A +++ N + GT ++APE++N + D++S G+ + + P+
Sbjct: 160 IDFGLAHKIDFGN--EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 365
+ E + V N E S+LA + ++R +P KR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 194 CCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-M 252
+++E GG L +L + + L+ + + G++YL +KKI H D+K EN M
Sbjct: 90 VVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 253 LLDKTRT---VKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
LLDK +K+ DFG+A E + + GT ++APE++N + D++S G+
Sbjct: 148 LLDKNIPIPHIKLIDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 310 CLWEIYCCDMPY 321
+ + P+
Sbjct: 207 ITYILLSGASPF 218
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 43 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 95
Query: 167 KFIGATMGTSELNIQTDNG-HIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K Q D + G+ Y G L Y+ R+ +F
Sbjct: 96 KLY--------FTFQDDEKLYFGL---------SYAKNGELLKYI----RKIGSFDETCT 134
Query: 226 --LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE-- 281
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 282 TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 194 CCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-M 252
+++E GG L +L + + L+ + + G++YL +KKI H D+K EN M
Sbjct: 90 VVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 253 LLDKTRT---VKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGI 309
LLDK +K+ DFG+A E + + GT ++APE++N + D++S G+
Sbjct: 148 LLDKNIPIPHIKLIDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 310 CLWEIYCCDMPY 321
+ + P+
Sbjct: 207 ITYILLSGASPF 218
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 34/219 (15%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 40 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 92
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ- 225
K +L + G+ Y G L Y+ R+ +F
Sbjct: 93 KLYFTFQDDEKL-------YFGL---------SYAKNGELLKYI----RKIGSFDETCTR 132
Query: 226 -LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET-- 282
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ + +
Sbjct: 133 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 192
Query: 283 GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 43 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 95
Query: 167 KFIGATMGTSELNIQTDNG-HIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ 225
K Q D + G+ Y G L Y+ R+ +F
Sbjct: 96 KLY--------FTFQDDEKLYFGL---------SYAKNGELLKYI----RKIGSFDETCT 134
Query: 226 --LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE-- 281
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 282 TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 34/219 (15%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 25 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 77
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ- 225
K +L + G+ Y G L Y+ R+ +F
Sbjct: 78 KLYFTFQDDEKL-------YFGL---------SYAKNGELLKYI----RKIGSFDETCTR 117
Query: 226 -LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE--T 282
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 118 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 177
Query: 283 GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 34/219 (15%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 48 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 100
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ- 225
K +L + G+ Y G L Y+ R+ +F
Sbjct: 101 KLYFCFQDDEKL-------YFGL---------SYAKNGELLKYI----RKIGSFDETCTR 140
Query: 226 -LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE--T 282
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 141 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 283 GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 201 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 41/223 (18%)
Query: 104 KGAFARGTFGT-VHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDH 162
K G GT V+RG++D +DVAVK + E ++ E+ LR + +H
Sbjct: 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRI-LPECFSFADREVQLLRES----------DEH 77
Query: 163 PNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKV 222
PNV ++ +E + Q F + +E C L+ Y+ + L +
Sbjct: 78 PNVIRYF-----CTEKDRQ-----------FQYIAIELC-AATLQEYVEQKDFAHLGLEP 120
Query: 223 VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT-----VKIADFGVARLEASNPHD 277
I L GL++L S IVHRD+K N+L+ I+DFG+ + A H
Sbjct: 121 -ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179
Query: 278 M---TGETGTLGYMAPEVLNGSAYNR---KCDVYSFGICLWEI 314
+G GT G++APE+L+ D++S G + +
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYV 222
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 34/219 (15%)
Query: 110 GTFGTV--HRGIYDGQDVAVKLLDWGEESHR-SEAEIASLRAAFTQEVAVWHKLDHPNVT 166
G+F TV R + ++ A+K+L E+ H E ++ + T+E V +LDHP
Sbjct: 40 GSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYV----TRERDVMSRLDHPFFV 92
Query: 167 KFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQ- 225
K +L + G+ Y G L Y+ R+ +F
Sbjct: 93 KLYFTFQDDEKL-------YFGL---------SYAKNGELLKYI----RKIGSFDETCTR 132
Query: 226 -LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGE--T 282
++ L YL K I+HRD+K EN+LL++ ++I DFG A++ +
Sbjct: 133 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 192
Query: 283 GTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ +A +E+ + KLDH N+ +
Sbjct: 31 GSFGVVYQA---------KLCDSGELV--AIKKVLQGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 80 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 187
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 225 QLALDLARGLSYLQSK-KIVHRDVKTENMLLDKTRTVKIADFGVA-RLEASNPHDMTGET 282
++A+ + + L +L SK ++HRDVK N+L++ VK DFG++ L D+ +
Sbjct: 140 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDI--DA 197
Query: 283 GTLGYMAPE----VLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD--LSFSEVTSAVVRQ 336
G Y APE LN Y+ K D++S GI E+ PY F ++ V +
Sbjct: 198 GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVV--E 255
Query: 337 NLRPEIPRCCPSS-LANVMKRCWDANPDKRPEMDEV 371
P++P S+ + +C N +RP E+
Sbjct: 256 EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPNV T+ N +TD +++E GG L
Sbjct: 58 REDIEREVSILKEIQHPNVI-----TLHEVYEN-KTD----------VILILELVAGGEL 101
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTR---TVKI 262
+L + + L + + + G+ YL S +I H D+K EN MLLD+ +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A +++ N + GT ++APE++N + D++S G+ + + P+
Sbjct: 160 IDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 365
+ E + V N E S+LA + ++R +P KR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ +A +E+ + KLDH N+ +
Sbjct: 31 GSFGVVYQA---------KLCDSGELV--AIKKVLQGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 80 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 187
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 151 TQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNG-HIGMPSNFCCVVVEYCHGGALKSY 209
T+E V +LDHP K Q D + G+ Y G L Y
Sbjct: 78 TRERDVMSRLDHPFFVKLY--------FTFQDDEKLYFGL---------SYAKNGELLKY 120
Query: 210 LIKNRRRKLAFKVVIQ--LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGV 267
+ R+ +F ++ L YL K I+HRD+K EN+LL++ ++I DFG
Sbjct: 121 I----RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGT 176
Query: 268 ARLEASNPHDMTGE--TGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
A++ + GT Y++PE+L + + D+++ G ++++ P+
Sbjct: 177 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 147 RAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGAL 206
R +EV++ ++ HPNV T+ N +TD ++ E GG L
Sbjct: 58 REDIEREVSILKEIQHPNVI-----TLHEVYEN-KTD----------VILIGELVAGGEL 101
Query: 207 KSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTEN-MLLDKTRT---VKI 262
+L + + L + + + G+ YL S +I H D+K EN MLLD+ +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 263 ADFGVA-RLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
DFG+A +++ N + GT ++APE++N + D++S G+ + + P+
Sbjct: 160 IDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 322 PDLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 365
+ E + V N E S+LA + ++R +P KR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 226 LALDLARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETGTL 285
L + +GL Y+ + I+HRD+K N+ +++ +KI DFG+AR S +M G T
Sbjct: 133 LVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS---EMXGXVVTR 189
Query: 286 GYMAPEV-LNGSAYNRKCDVYSFGICLWEI 314
Y APEV LN Y + D++S G + E+
Sbjct: 190 WYRAPEVILNWMRYTQTVDIWSVGCIMAEM 219
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 33/217 (15%)
Query: 110 GTFGTVHR--GIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTK 167
G FG VH+ G +A K++ + E + E++V ++LDH N+ +
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK---------NEISVMNQLDHANLIQ 150
Query: 168 FIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLA 227
A +++ +V+EY GG L +I ++ +
Sbjct: 151 LYDAFESKNDI----------------VLVMEYVDGGELFDRIIDESYNLTELDTILFMK 194
Query: 228 LDLARGLSYLQSKKIVHRDVKTENMLL--DKTRTVKIADFGVARLEASNPHD-MTGETGT 284
+ G+ ++ I+H D+K EN+L + +KI DFG+AR P + + GT
Sbjct: 195 -QICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR--RYKPREKLKVNFGT 251
Query: 285 LGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
++APEV+N + D++S G+ + + P+
Sbjct: 252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 32/223 (14%)
Query: 107 FARGTFGTVHR--GIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPN 164
+G F V R + GQ+ A +++ + S R ++ +E + L HPN
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKL-------EREARICRLLKHPN 71
Query: 165 VTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLA-FKVV 223
+ + + ++ GH ++ + GG L ++ A
Sbjct: 72 IVRLHDSI---------SEEGH-------HYLIFDLVTGGELFEDIVAREYYSEADASHC 115
Query: 224 IQLALDLARGLSYLQSKKIVHRDVKTENMLLD---KTRTVKIADFGVARLEASNPHDMTG 280
IQ L+ + + +VHR++K EN+LL K VK+ADFG+A G
Sbjct: 116 IQQILE---AVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 172
Query: 281 ETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPD 323
GT GY++PEVL Y + D+++ G+ L+ + P+ D
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD 215
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 199 EYCHGGALKSYLIKNRRRKLAFKV--VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
EYC+GG+L + +N R FK + L L + RGL Y+ S +VH D+K N+ + +
Sbjct: 87 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 146
Query: 257 TRT-------------------VKIADFG-VARLEASNPHDMTGETGTLGYMAPEVLNGS 296
T KI D G V R+ S+P E G ++A EVL +
Sbjct: 147 TSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI--SSPQ---VEEGDSRFLANEVLQEN 201
Query: 297 -AYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVM 354
+ K D+++ + + + +P + E +RQ P IP+ ++
Sbjct: 202 YTHLPKADIFALALTVVXAAGAEPLPRNGDQWHE-----IRQGRLPRIPQVLSQEFTELL 256
Query: 355 KRCWDANPDKRP 366
K +P++RP
Sbjct: 257 KVMIHPDPERRP 268
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 32/191 (16%)
Query: 199 EYCHGGALKSYLIKNRRRKLAFKV--VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
EYC+GG+L + +N R FK + L L + RGL Y+ S +VH D+K N+ + +
Sbjct: 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 150
Query: 257 TRT-------------------VKIADFG-VARLEASNPHDMTGETGTLGYMAPEVLNGS 296
T KI D G V R+ S+P E G ++A EVL +
Sbjct: 151 TSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI--SSPQ---VEEGDSRFLANEVLQEN 205
Query: 297 -AYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMK 355
+ K D+++ + + C L + +RQ P IP+ ++K
Sbjct: 206 YTHLPKADIFALALTV----VCAAGAEPLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLK 261
Query: 356 RCWDANPDKRP 366
+P++RP
Sbjct: 262 VMIHPDPERRP 272
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 31 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 80 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY 187
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 31 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 80 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY 187
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 32/191 (16%)
Query: 199 EYCHGGALKSYLIKNRRRKLAFKV--VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
EYC+GG+L + +N R FK + L L + RGL Y+ S +VH D+K N+ + +
Sbjct: 89 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 148
Query: 257 TRT-------------------VKIADFG-VARLEASNPHDMTGETGTLGYMAPEVLNGS 296
T KI D G V R+ S+P E G ++A EVL +
Sbjct: 149 TSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI--SSPQ---VEEGDSRFLANEVLQEN 203
Query: 297 -AYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMK 355
+ K D+++ + + C L + +RQ P IP+ ++K
Sbjct: 204 YTHLPKADIFALALTV----VCAAGAEPLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLK 259
Query: 356 RCWDANPDKRP 366
+P++RP
Sbjct: 260 VMIHPDPERRP 270
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 32/191 (16%)
Query: 199 EYCHGGALKSYLIKNRRRKLAFKV--VIQLALDLARGLSYLQSKKIVHRDVKTENMLLDK 256
EYC+GG+L + +N R FK + L L + RGL Y+ S +VH D+K N+ + +
Sbjct: 89 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 148
Query: 257 TRT-------------------VKIADFG-VARLEASNPHDMTGETGTLGYMAPEVLNGS 296
T KI D G V R+ S+P E G ++A EVL +
Sbjct: 149 TSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI--SSPQ---VEEGDSRFLANEVLQEN 203
Query: 297 -AYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMK 355
+ K D+++ + + C L + +RQ P IP+ ++K
Sbjct: 204 YTHLPKADIFALALTV----VCAAGAEPLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLK 259
Query: 356 RCWDANPDKRP 366
+P++RP
Sbjct: 260 VMIHPDPERRP 270
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 39 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 87
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 88 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 137
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 138 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY 195
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAEL 224
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 103/256 (40%), Gaps = 52/256 (20%)
Query: 92 QEWEIDPAKLIIKGAFARGTFGTVHRGI---YDGQDVAVKLL---DWGEESHRSEAEIAS 145
Q ++ A+ I G FG V I G+ VAVK++ D E+ RSE ++
Sbjct: 7 QSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQV-- 64
Query: 146 LRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGA 205
L+H N T L +GHI C+V E G +
Sbjct: 65 --------------LEHLNTTDPNSTFRCVQMLEWFEHHGHI-------CIVFELL-GLS 102
Query: 206 LKSYLIKNRRRKLAFKVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKT-------- 257
++ +N + ++A + + +++L S K+ H D+K EN+L ++
Sbjct: 103 TYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNP 162
Query: 258 ------RT-----VKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYS 306
RT +K+ DFG A + + + T Y APEV+ +++ CDV+S
Sbjct: 163 KIKRDERTLINPDIKVVDFGSATYDDEHHSTLVS---TRHYRAPEVILALGWSQPCDVWS 219
Query: 307 FGICLWEIYCCDMPYP 322
G L E Y +P
Sbjct: 220 IGCILIEYYLGFTVFP 235
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 32 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 80
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 81 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 130
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 131 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY 188
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAEL 217
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 50 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 98
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 99 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 148
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 149 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY 206
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAEL 235
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 35 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 83
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 84 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 133
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 134 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY 191
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAEL 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 31 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 80 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 187
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 43 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 92 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY 199
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAEL 228
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 44 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 92
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 93 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 142
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 143 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 200
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAEL 229
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 43 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 92 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY 199
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAEL 228
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 232 RGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD----------MTGE 281
R + L ++HRD+K N+L++ +K+ DFG+AR+ + D MT
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEX 182
Query: 282 TGTLGYMAPEVLNGSA-YNRKCDVYSFGICLWEIY 315
T Y APEV+ SA Y+R DV+S G L E++
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 65 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 114 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY 221
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAEL 250
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 188
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXEC----QHLIRWC 238
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 239 LALRPSDRPTFEEI 252
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 31 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 80 YFFYSSGE---KKDVVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY 187
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 55/125 (44%), Gaps = 4/125 (3%)
Query: 244 HRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGET-GTLGYMAPEVLNGSAYNRKC 302
HRDVK EN+L+ + DFG+A G T GTL Y APE + S +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 303 DVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL-RPEIPR-CCPSSLANVMKRCWDA 360
D+Y+ L+E PY S V A + Q + RP R P + V+ R
Sbjct: 217 DIYALTCVLYECLTGSPPYQGDQLS-VXGAHINQAIPRPSTVRPGIPVAFDAVIARGXAK 275
Query: 361 NPDKR 365
NP+ R
Sbjct: 276 NPEDR 280
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 193
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWC 243
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 244 LALRPSDRPTFEEI 257
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 192
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 193 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWC 242
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 243 LALRPSDRPTFEEI 256
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 215
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 216 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXEC----QHLIRWC 265
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 266 LALRPSDRPTFEEI 279
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 191
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 192 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWC 241
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 242 LALRPSDRPTFEEI 255
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 232 RGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHD----------MTGE 281
R + L ++HRD+K N+L++ +K+ DFG+AR+ + D MT
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 282 TGTLGYMAPEVLNGSA-YNRKCDVYSFGICLWEIY 315
T Y APEV+ SA Y+R DV+S G L E++
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 65 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 114 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 221
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAEL 250
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 188
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWC 238
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 239 LALRPSDRPTFEEI 252
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 193
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWC 243
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 244 LALRPSDRPTFEEI 257
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 193
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWC 243
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 244 LALRPSDRPTFEEI 257
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 59 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 107
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 108 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 157
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 158 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 215
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAEL 244
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 192
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 193 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWC 242
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 243 LALRPSDRPTFEEI 256
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 235
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWC 285
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 286 LALRPSDRPTFEEI 299
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 67 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 115
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 116 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 165
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 166 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 223
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAEL 252
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 36 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 84
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 85 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 134
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 135 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 192
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAEL 221
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
Query: 232 RGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPHDMTGETG-------- 283
R + L ++HRD+K N+L++ +K+ DFG+AR+ + D + TG
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 284 --TLGYMAPEVLNGSA-YNRKCDVYSFGICLWEIY 315
T Y APEV+ SA Y+R DV+S G L E++
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 235
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWC 285
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 286 LALRPSDRPTFEEI 299
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 69 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 117
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 118 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 167
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 168 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 225
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAEL 254
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 235
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXEC----QHLIRWC 285
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 286 LALRPSDRPTFEEI 299
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 220
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWC 270
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 271 LALRPSDRPTFEEI 284
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 240
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 241 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXEC----QHLIRWC 290
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 291 LALRPSDRPTFEEI 304
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 33/224 (14%)
Query: 103 IKGAFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I G FG VHR G + A K + H S+ E +E+ L
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVR------KEIQTMSVL 211
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HP + A +E+ ++ E+ GG L + + K++
Sbjct: 212 RHPTLVNLHDAFEDDNEM----------------VMIYEFMSGGELFE-KVADEHNKMSE 254
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT--VKIADFGV-ARLEASNPHD 277
++ + +GL ++ VH D+K EN++ R+ +K+ DFG+ A L+
Sbjct: 255 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314
Query: 278 MTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
+T TGT + APEV G D++S G+ + + P+
Sbjct: 315 VT--TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 110 GTFGTVHRGIYDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFI 169
G+FG V++ KL D GE + ++ + +E+ + KLDH N+ +
Sbjct: 110 GSFGVVYQA---------KLCDSGELV--AIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 158
Query: 170 GATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAFKVVIQLAL- 228
+ E + D ++ + V++Y + +R ++ + ++L +
Sbjct: 159 YFFYSSGE---KKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 208
Query: 229 DLARGLSYLQSKKIVHRDVKTENMLLDK-TRTVKIADFGVAR-LEASNPHDMTGETGTLG 286
L R L+Y+ S I HRD+K +N+LLD T +K+ DFG A+ L P+ +
Sbjct: 209 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 266
Query: 287 YMAPEVLNGSA-YNRKCDVYSFGICLWEI 314
Y APE++ G+ Y DV+S G L E+
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAEL 295
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 208
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWC 258
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 259 LALRPSDRPTFEEI 272
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 207
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 208 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWC 257
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 258 LALRPSDRPTFEEI 271
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 227
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 228 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWC 277
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 278 LALRPSDRPTFEEI 291
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 207
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 208 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXEC----QHLIRWC 257
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 258 LALRPSDRPTFEEI 271
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 208
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXEC----QHLIRWC 258
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 259 LALRPSDRPTFEEI 272
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 22/115 (19%)
Query: 230 LARGLSYLQSKKIVHRDVKTENMLLDKTRTVKIADFGVARL----------------EAS 273
L + + YL S ++HRD+K N+LL+ VK+ADFG++R E +
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 274 NPHD-----MTGETGTLGYMAPEVLNGSA-YNRKCDVYSFGICLWEIYCCDMPYP 322
D +T T Y APE+L GS Y + D++S G L EI C +P
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 33/224 (14%)
Query: 103 IKGAFARGTFGTVHRGI--YDGQDVAVKLLDWGEESHRSEAEIASLRAAFTQEVAVWHKL 160
I G FG VHR G + A K + H S+ E +E+ L
Sbjct: 55 IHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVR------KEIQTMSVL 105
Query: 161 DHPNVTKFIGATMGTSELNIQTDNGHIGMPSNFCCVVVEYCHGGALKSYLIKNRRRKLAF 220
HP + A +E+ ++ E+ GG L + + K++
Sbjct: 106 RHPTLVNLHDAFEDDNEM----------------VMIYEFMSGGELFE-KVADEHNKMSE 148
Query: 221 KVVIQLALDLARGLSYLQSKKIVHRDVKTENMLLDKTRT--VKIADFGV-ARLEASNPHD 277
++ + +GL ++ VH D+K EN++ R+ +K+ DFG+ A L+
Sbjct: 149 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 208
Query: 278 MTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPY 321
+T TGT + APEV G D++S G+ + + P+
Sbjct: 209 VT--TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 24/222 (10%)
Query: 185 GHIGMPSNFCC-------VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYL 237
G +G+P+ C V+V G +L+ L RK + K V+ LA + + Y+
Sbjct: 63 GGVGIPTIRWCGAEGDYNVMVMELLGPSLED-LFNFCSRKFSLKTVLLLADQMISRIEYI 121
Query: 238 QSKKIVHRDVKTENMLL---DKTRTVKIADFGV------ARLEASNPH-DMTGETGTLGY 287
SK +HRDVK +N L+ K V I DFG+ AR P+ + TGT Y
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 181
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFS---EVTSAVVRQNLRPEIPR 344
+ G +R+ D+ S G L +P+ L + + + + + I
Sbjct: 182 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 241
Query: 345 CC---PSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
C PS A + C D +P+ + + + +G
Sbjct: 242 LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 24/222 (10%)
Query: 185 GHIGMPSNFCC-------VVVEYCHGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYL 237
G +G+P+ C V+V G +L+ L RK + K V+ LA + + Y+
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLED-LFNFCSRKFSLKTVLLLADQMISRIEYI 119
Query: 238 QSKKIVHRDVKTENMLL---DKTRTVKIADFGV------ARLEASNPH-DMTGETGTLGY 287
SK +HRDVK +N L+ K V I DFG+ AR P+ + TGT Y
Sbjct: 120 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 179
Query: 288 MAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFS---EVTSAVVRQNLRPEIPR 344
+ G +R+ D+ S G L +P+ L + + + + + I
Sbjct: 180 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 239
Query: 345 CC---PSSLANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKG 383
C PS A + C D +P+ + + + +G
Sbjct: 240 LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 281
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 208
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRC 357
R V+S GI L+++ C D+P+ E ++R R + C ++++ C
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXEC----QHLIRWC 258
Query: 358 WDANPDKRPEMDEV 371
P RP +E+
Sbjct: 259 LALRPXDRPTFEEI 272
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 12/132 (9%)
Query: 242 IVHRDVKTENMLLDKTR-TVKIADFGVARLEASNPHDMTGETGTLGYMAPEVLNGSAYN- 299
++HRD+K EN+L+D R +K+ DFG L + T GT Y PE + Y+
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHG 188
Query: 300 RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWD 359
R V+S GI L+++ C D+P+ RQ + S ++++ C
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLA 240
Query: 360 ANPDKRPEMDEV 371
P RP +E+
Sbjct: 241 LRPSDRPTFEEI 252
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,210,632
Number of Sequences: 62578
Number of extensions: 434503
Number of successful extensions: 4063
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 1086
Number of HSP's gapped (non-prelim): 1144
length of query: 404
length of database: 14,973,337
effective HSP length: 101
effective length of query: 303
effective length of database: 8,652,959
effective search space: 2621846577
effective search space used: 2621846577
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)