Query 015599
Match_columns 404
No_of_seqs 290 out of 1275
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 15:25:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015599.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015599hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3icu_A E3 ubiquitin-protein li 99.9 1.1E-22 3.6E-27 186.7 18.8 142 38-189 32-186 (194)
2 3iib_A Peptidase M28; YP_92679 99.2 7.2E-11 2.4E-15 121.2 15.2 130 41-188 78-225 (444)
3 2ek8_A Aminopeptidase; metallo 99.0 2.5E-09 8.6E-14 108.7 14.6 102 68-188 90-195 (421)
4 3fed_A Glutamate carboxypeptid 98.7 2E-08 6.9E-13 108.4 9.9 105 68-178 124-268 (707)
5 3kas_A Transferrin receptor pr 98.7 3.2E-08 1.1E-12 105.8 10.8 103 68-177 105-230 (640)
6 3i6s_A Subtilisin-like proteas 98.0 6.3E-06 2.2E-10 88.3 7.9 96 74-188 260-356 (649)
7 1xf1_A C5A peptidase, SCP; hyd 97.9 4.2E-05 1.4E-09 85.1 11.7 75 82-174 268-343 (926)
8 1y9z_A Alkaline serine proteas 97.7 4.4E-05 1.5E-09 77.8 7.8 89 83-185 258-355 (441)
9 3gha_A Disulfide bond formatio 94.9 0.041 1.4E-06 49.7 6.3 96 294-401 86-183 (202)
10 3bci_A Disulfide bond protein 93.2 0.16 5.4E-06 44.5 6.7 95 294-400 68-168 (186)
11 3gyk_A 27KDA outer membrane pr 92.8 0.19 6.6E-06 43.3 6.4 82 309-401 83-164 (175)
12 3gmf_A Protein-disulfide isome 90.5 0.079 2.7E-06 48.1 1.4 62 333-401 126-188 (205)
13 3vta_A Cucumisin; subtilisin-l 88.3 0.78 2.7E-05 48.5 7.2 62 99-179 280-341 (621)
14 3hz8_A Thiol:disulfide interch 85.8 0.25 8.7E-06 43.8 1.5 61 330-397 109-170 (193)
15 2imf_A HCCA isomerase, 2-hydro 85.4 0.35 1.2E-05 43.1 2.2 61 332-399 125-185 (203)
16 3h93_A Thiol:disulfide interch 85.1 0.41 1.4E-05 41.9 2.5 84 309-399 86-173 (192)
17 3fz5_A Possible 2-hydroxychrom 84.1 0.39 1.3E-05 42.9 1.9 83 309-398 107-190 (202)
18 3hd5_A Thiol:disulfide interch 83.9 0.61 2.1E-05 40.9 3.1 60 330-396 107-166 (195)
19 4dvc_A Thiol:disulfide interch 83.2 0.81 2.8E-05 39.2 3.6 54 330-390 106-159 (184)
20 3f4s_A Alpha-DSBA1, putative u 83.0 0.29 9.8E-06 45.1 0.6 83 309-397 103-190 (226)
21 2rem_A Disulfide oxidoreductas 82.5 0.36 1.2E-05 42.1 0.9 59 330-395 111-170 (193)
22 3l9v_A Putative thiol-disulfid 81.6 1.3 4.6E-05 38.9 4.4 55 330-391 100-155 (189)
23 3l9s_A Thiol:disulfide interch 79.5 0.89 3E-05 40.3 2.5 56 330-392 107-162 (191)
24 3gl5_A Putative DSBA oxidoredu 78.3 0.92 3.1E-05 41.8 2.3 85 309-400 115-203 (239)
25 2znm_A Thiol:disulfide interch 77.7 0.67 2.3E-05 40.5 1.1 60 331-397 106-167 (195)
26 1un2_A DSBA, thiol-disulfide i 70.6 1.7 5.9E-05 38.8 2.0 60 333-399 9-70 (197)
27 2in3_A Hypothetical protein; D 68.9 1.8 6.3E-05 38.3 1.7 85 309-400 110-200 (216)
28 3kp8_A Vkorc1/thioredoxin doma 59.0 1.6 5.5E-05 34.8 -0.6 25 378-402 63-87 (106)
29 3c7m_A Thiol:disulfide interch 57.2 2.4 8.2E-05 36.6 0.2 49 337-392 125-173 (195)
30 3feu_A Putative lipoprotein; a 56.4 2.7 9.3E-05 36.8 0.5 62 330-399 108-173 (185)
31 3kzq_A Putative uncharacterize 53.0 5.2 0.00018 35.3 1.8 73 310-389 104-177 (208)
32 1r4w_A Glutathione S-transfera 52.3 7.1 0.00024 35.0 2.6 82 309-397 113-202 (226)
33 3rpp_A Glutathione S-transfera 49.5 11 0.00037 34.3 3.4 63 330-396 135-201 (234)
34 3gn3_A Putative protein-disulf 43.0 12 0.00042 32.6 2.5 52 333-394 116-167 (182)
35 1fo5_A Thioredoxin; disulfide 40.9 5.8 0.0002 28.8 0.0 25 377-401 52-77 (85)
36 4f87_A Plycb; lysin, bacteriop 36.7 16 0.00055 26.2 1.8 20 158-177 52-71 (72)
37 1nho_A Probable thioredoxin; b 36.4 6.8 0.00023 28.4 -0.2 25 377-401 51-76 (85)
38 4b2v_A S64; toxin, ICK; NMR {S 36.4 15 0.00051 22.5 1.3 13 262-275 2-14 (32)
39 1z6m_A Conserved hypothetical 26.3 24 0.00082 29.7 1.5 24 378-401 146-169 (175)
40 2hi6_A UPF0107 protein AF0055; 25.8 70 0.0024 27.2 4.3 77 93-185 43-123 (141)
41 1ilo_A Conserved hypothetical 25.7 9 0.00031 27.3 -1.2 23 379-401 48-72 (77)
42 3kp9_A Vkorc1/thioredoxin doma 24.3 14 0.00048 35.2 -0.4 25 378-402 248-272 (291)
No 1
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=99.90 E-value=1.1e-22 Score=186.73 Aligned_cols=142 Identities=21% Similarity=0.334 Sum_probs=111.0
Q ss_pred eecCeEEEE--cCCC---cceeeeccccccCCCCCCCceEEEEEecC--CCCCCCCCCCCCC-CC--CCCCCCCeEEEEe
Q 015599 38 VEKSSIRVL--HPQS---LRSKHDSAIGNFGIPDYGGFMVGSVIYPD--KGASGCQPFEGDK-PF--KSKFPRPTVLLLD 107 (404)
Q Consensus 38 ve~~~l~V~--~P~~---l~~~~~~~~A~FG~~~~~~~l~G~lv~~~--~~~~gC~~~~~~~-~~--~~~~~~g~IvLV~ 107 (404)
..+..+.|. .|.. ...++....|+||.+.+.++++|.|+++. ++.+||++.++.. +. .++..+++||||+
T Consensus 32 ~~~A~vn~sy~d~~~~~n~t~~~~~e~a~FG~~~p~~~v~G~lv~~~~~~~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~ 111 (194)
T 3icu_A 32 VWTAYLNVSWRVPHTGVNRTVWELSEEGVYGQDSPLEPVAGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQ 111 (194)
T ss_dssp EEEEEEEEEEECCSSCTTCEEEEEEEEEEECTTSCCSCEEEEEECBSSTTCTTCCSTTCCBCCCBCTTSSCBCCEEEEEE
T ss_pred EEEEEEEEEEECCCCCccceeeecccccccCCCCCCCCcEEEEEecCCCCCcCCCCCCccccCCcccccccCCCeEEEEE
Confidence 344555544 3443 22357788999999999999999999975 4789999987421 11 1122368999999
Q ss_pred cCC-CCHHHHHHHHHHcCCcEEEEEECCC--CCccccCCCCCCcccCCCccccCceEEEEeHHHHHHHHHHHhcCCEEEE
Q 015599 108 RGE-CYFALKVWHGQQAGAAAVLVADSVD--EPLITMDSPEESTDANGYVEKIGIPSALIDRAFGLSLKEALKKGEEVVI 184 (404)
Q Consensus 108 RG~-CsF~~Kv~nAQ~aGA~avII~nn~~--~~l~~m~~~~d~~~~~~~~~~i~IPsv~Is~~dG~~L~~~l~~g~~V~v 184 (404)
||+ |+|.+|++|||++||+||||||+.. +.+.+|+.++ ..+||+++|++++|+.|+++|++|.+|++
T Consensus 112 RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~----------~~~IPsv~Is~~~G~~L~~~L~~G~~Vtv 181 (194)
T 3icu_A 112 RGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPG----------AVDIVAIMIGNLKGTKILQSIQRGIQVTM 181 (194)
T ss_dssp SCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTT----------CCSSEEEEECHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCC----------CCceeEEEECHHHHHHHHHHHHCCCeEEE
Confidence 999 9999999999999999999999852 3456776321 35799999999999999999999999999
Q ss_pred EEEec
Q 015599 185 KLDWT 189 (404)
Q Consensus 185 ~l~~~ 189 (404)
++...
T Consensus 182 ti~vg 186 (194)
T 3icu_A 182 VIEVG 186 (194)
T ss_dssp EEEEE
T ss_pred EEECC
Confidence 88873
No 2
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.24 E-value=7.2e-11 Score=121.18 Aligned_cols=130 Identities=17% Similarity=0.135 Sum_probs=90.2
Q ss_pred CeEEEEcCCCcceeeeccccccCCCCCCCceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCeEEEEecCCCC--------
Q 015599 41 SSIRVLHPQSLRSKHDSAIGNFGIPDYGGFMVGSVIYPDKGASGCQPFEGDKPFKSKFPRPTVLLLDRGECY-------- 112 (404)
Q Consensus 41 ~~l~V~~P~~l~~~~~~~~A~FG~~~~~~~l~G~lv~~~~~~~gC~~~~~~~~~~~~~~~g~IvLV~RG~Cs-------- 112 (404)
.+++|+.|.. ..+......+++..+.++++|+||++. +...|.... +.++ +||||||+||.|.
T Consensus 78 ~~~~~~~~~~--~~~~~~~l~~s~~tp~~~vta~lV~v~-~~~~~~~~~-~~dv-----kGKIVlv~~~~~~~~~~~~y~ 148 (444)
T 3iib_A 78 AKASILSPFP--QPLVVTALGGSIATPAQGLSATIVRFD-TLQDLQNAE-AGSL-----NDKIAFIDAKTERHRDGKGYG 148 (444)
T ss_dssp EEEEEEESSC--EEECEEECBTCCCCCTTCEEEEEEEES-SHHHHHTSC-TTTT-----TTCEEEECCCCCCCTTCHHHH
T ss_pred eEEEEeCCCC--ceEEEEeccCCCCCCCCCeEEEEEecC-CHHHHhhcc-cccc-----CccEEEEeCCCCCCccccccc
Confidence 3466666642 344444445665555678999999964 233344322 2244 6999999999995
Q ss_pred -HHHHH----HHHHHcCCcEEEEEECCCCC---cc--ccCCCCCCcccCCCccccCceEEEEeHHHHHHHHHHHhcCCEE
Q 015599 113 -FALKV----WHGQQAGAAAVLVADSVDEP---LI--TMDSPEESTDANGYVEKIGIPSALIDRAFGLSLKEALKKGEEV 182 (404)
Q Consensus 113 -F~~Kv----~nAQ~aGA~avII~nn~~~~---l~--~m~~~~d~~~~~~~~~~i~IPsv~Is~~dG~~L~~~l~~g~~V 182 (404)
|..|. .+|+++||+|+||+|+.... +. +|+.+ .....||++.|+.++|+.|+++++.|+++
T Consensus 149 ~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~---------~~~~~IP~~~Is~~da~~L~~~l~~g~~~ 219 (444)
T 3iib_A 149 QTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYE---------EGVTAIPAAAISNPDADLINAMLKRDKEV 219 (444)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCC---------TTSCCCCEEEECHHHHHHHHHHHTTTCCC
T ss_pred chhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccC---------CCCCCCCeEEecHHHHHHHHHHHhCCCCe
Confidence 77774 57999999999999975432 11 12211 12478999999999999999999988777
Q ss_pred EEEEEe
Q 015599 183 VIKLDW 188 (404)
Q Consensus 183 ~v~l~~ 188 (404)
++++..
T Consensus 220 ~v~l~~ 225 (444)
T 3iib_A 220 VISLEL 225 (444)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777766
No 3
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.02 E-value=2.5e-09 Score=108.73 Aligned_cols=102 Identities=23% Similarity=0.280 Sum_probs=73.3
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCeEEEEecCCCCHHHHHHHHHHcCCcEEEEEECCCCCcc-ccCCCCC
Q 015599 68 GGFMVGSVIYPDKGASGCQPFEGDKPFKSKFPRPTVLLLDRGECYFALKVWHGQQAGAAAVLVADSVDEPLI-TMDSPEE 146 (404)
Q Consensus 68 ~~~l~G~lv~~~~~~~gC~~~~~~~~~~~~~~~g~IvLV~RG~CsF~~Kv~nAQ~aGA~avII~nn~~~~l~-~m~~~~d 146 (404)
.+.++|+||++. .| .+.+ +.....+||||||+||+|+|..|+++|+++||+||||+++.+.... +++.
T Consensus 90 ~g~v~a~lv~~~---~G-~~~D----~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~--- 158 (421)
T 2ek8_A 90 NSDVTAELVYVG---LG-TTAD----VAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGG--- 158 (421)
T ss_dssp CEEEEEEEEECT---TC-CTTT----TTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSS---
T ss_pred CCCcceEEEECC---CC-Chhh----cCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCC---
Confidence 358999998842 22 2222 2222346999999999999999999999999999999998644321 1211
Q ss_pred CcccCCCccccCceEEEEeHHHHHHHHHHH---hcCCEEEEEEEe
Q 015599 147 STDANGYVEKIGIPSALIDRAFGLSLKEAL---KKGEEVVIKLDW 188 (404)
Q Consensus 147 ~~~~~~~~~~i~IPsv~Is~~dG~~L~~~l---~~g~~V~v~l~~ 188 (404)
.....||++.|+.++++.|++.+ +.| .+.+++..
T Consensus 159 -------~~~~~IP~~~Is~~~a~~L~~~l~~~~~g-~~~v~l~~ 195 (421)
T 2ek8_A 159 -------SDASFVAAVGITKQEGDALAANLRAGEKI-TATVKVAG 195 (421)
T ss_dssp -------CCTTCCEEEEECHHHHHHHHHHHHTTCCC-EEEEEEES
T ss_pred -------CCCCCccEEEeCHHHHHHHHHHhhhhccC-Cccccccc
Confidence 12478999999999999999999 444 34444443
No 4
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.74 E-value=2e-08 Score=108.36 Aligned_cols=105 Identities=16% Similarity=0.186 Sum_probs=70.1
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCCC---CCCCCCeEEEEecCCCCHHHHHHHHHHcCCcEEEEEECCCC--------
Q 015599 68 GGFMVGSVIYPDKGASGCQPFEGDKPFK---SKFPRPTVLLLDRGECYFALKVWHGQQAGAAAVLVADSVDE-------- 136 (404)
Q Consensus 68 ~~~l~G~lv~~~~~~~gC~~~~~~~~~~---~~~~~g~IvLV~RG~CsF~~Kv~nAQ~aGA~avII~nn~~~-------- 136 (404)
.+.++|+||++ ..||.. ++. .+. ....+|+||||+||.|+|..|+++||++||+|||||++..+
T Consensus 124 ~G~v~g~lV~v---~~G~~~-Df~-~L~~~~~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~ 198 (707)
T 3fed_A 124 QGMPEGDLVYV---NYARTE-DFF-KLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQP 198 (707)
T ss_dssp CBCCEECEEEC---TTCCHH-HHH-HHHHTSCCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCB
T ss_pred CCceEEEEEEe---cCCchh-hHH-HHHhccCCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhcccccccc
Confidence 46799999995 367732 110 000 12346999999999999999999999999999999986310
Q ss_pred ---------------CccccCCCCCCcccCCC--------------ccccCceEEEEeHHHHHHHHHHHhc
Q 015599 137 ---------------PLITMDSPEESTDANGY--------------VEKIGIPSALIDRAFGLSLKEALKK 178 (404)
Q Consensus 137 ---------------~l~~m~~~~d~~~~~~~--------------~~~i~IPsv~Is~~dG~~L~~~l~~ 178 (404)
.+..+..++|.. ..++ .....||++-|+.+||+.|++.|..
T Consensus 199 yP~~~~~p~~~vqrGsv~~~~~~GDp~-TPG~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 199 YPKGWNLPGTAAQRGNVLNLNGAGDPL-TPGYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp TTTSSBCCTTCCCCCCCCCCTTCCSTT-CTTSCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred CCCCccCCCccccccceecccCCCCCC-CCCCcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 000000112200 0011 1136899999999999999998863
No 5
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.73 E-value=3.2e-08 Score=105.76 Aligned_cols=103 Identities=17% Similarity=0.204 Sum_probs=69.5
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCeEEEEecCCCCHHHHHHHHHHcCCcEEEEEECCCCC-cc-------
Q 015599 68 GGFMVGSVIYPDKGASGCQPFEGDKPFKSKFPRPTVLLLDRGECYFALKVWHGQQAGAAAVLVADSVDEP-LI------- 139 (404)
Q Consensus 68 ~~~l~G~lv~~~~~~~gC~~~~~~~~~~~~~~~g~IvLV~RG~CsF~~Kv~nAQ~aGA~avII~nn~~~~-l~------- 139 (404)
.+.++|+||++ ..||.. ++. .+. .+.+||||||+||.|+|..|+++|+++||+|||||++..+. ..
T Consensus 105 ~g~v~g~lV~v---g~G~~~-D~~-~l~-vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~ 178 (640)
T 3kas_A 105 AATVTGKLVHA---NFGTKK-DFE-DLY-TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFF 178 (640)
T ss_dssp CEEEEECEEEC---TTCCHH-HHH-TCS-SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCC
T ss_pred CCceEEEEEEe---cCCChh-hHH-Hhh-cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccc
Confidence 45789999995 356632 111 111 23469999999999999999999999999999999976421 10
Q ss_pred ---ccCCCCCC-ccc-----------CCCccccCceEEEEeHHHHHHHHHHHh
Q 015599 140 ---TMDSPEES-TDA-----------NGYVEKIGIPSALIDRAFGLSLKEALK 177 (404)
Q Consensus 140 ---~m~~~~d~-~~~-----------~~~~~~i~IPsv~Is~~dG~~L~~~l~ 177 (404)
.++ ++|. +++ ........||++.|+.++|+.|++.+.
T Consensus 179 G~~~~~-~Gdp~tpg~ps~~~~~~~~~~~~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 179 GHAHLG-TGDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp EECCSS-SSCSCCCSSCC---CCCCCCSSCCCCSSCEEECCHHHHHHHHTTEE
T ss_pred cccccC-CCCCCCCCcccccccccccccccCCCCCCEEecCHHHHHHHHHHcc
Confidence 011 1110 000 000113589999999999999998764
No 6
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=98.04 E-value=6.3e-06 Score=88.29 Aligned_cols=96 Identities=15% Similarity=0.194 Sum_probs=70.9
Q ss_pred EEEecCCCCCCCCCCCC-CCCCCCCCCCCeEEEEecCCCCHHHHHHHHHHcCCcEEEEEECCCCCccccCCCCCCcccCC
Q 015599 74 SVIYPDKGASGCQPFEG-DKPFKSKFPRPTVLLLDRGECYFALKVWHGQQAGAAAVLVADSVDEPLITMDSPEESTDANG 152 (404)
Q Consensus 74 ~lv~~~~~~~gC~~~~~-~~~~~~~~~~g~IvLV~RG~CsF~~Kv~nAQ~aGA~avII~nn~~~~l~~m~~~~d~~~~~~ 152 (404)
+|+++. ....|.+... +..+ +.+|+|+|++||.|.|.+|..+++++||.++|++|+. +.+ ..
T Consensus 260 plv~~~-~~~~C~~~~l~~~~v---dl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~-~~~--~~---------- 322 (649)
T 3i6s_A 260 PVIYNK-TLSDCSSEELLSQVE---NPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDP-GVF--RS---------- 322 (649)
T ss_dssp EEECCT-TTTTCCCHHHHTTSS---SGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCG-GGG--GC----------
T ss_pred eeEecc-ccccccccccccccc---ccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCc-ccc--cc----------
Confidence 455533 5678987531 1111 1159999999999999999999999999999999876 211 10
Q ss_pred CccccCceEEEEeHHHHHHHHHHHhcCCEEEEEEEe
Q 015599 153 YVEKIGIPSALIDRAFGLSLKEALKKGEEVVIKLDW 188 (404)
Q Consensus 153 ~~~~i~IPsv~Is~~dG~~L~~~l~~g~~V~v~l~~ 188 (404)
....||+++|+.++|+.|++++.++...++++.+
T Consensus 323 --~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~ 356 (649)
T 3i6s_A 323 --ATFPNPGVVVNKKEGKQVINYVKNSVTPTATITF 356 (649)
T ss_dssp --CCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEE
T ss_pred --ccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEee
Confidence 1357999999999999999999987654444443
No 7
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=97.91 E-value=4.2e-05 Score=85.08 Aligned_cols=75 Identities=31% Similarity=0.453 Sum_probs=58.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCeEEEEecCCCCHHHHHHHHHHcCCcEEEEEECCCCCc-cccCCCCCCcccCCCccccCce
Q 015599 82 ASGCQPFEGDKPFKSKFPRPTVLLLDRGECYFALKVWHGQQAGAAAVLVADSVDEPL-ITMDSPEESTDANGYVEKIGIP 160 (404)
Q Consensus 82 ~~gC~~~~~~~~~~~~~~~g~IvLV~RG~CsF~~Kv~nAQ~aGA~avII~nn~~~~l-~~m~~~~d~~~~~~~~~~i~IP 160 (404)
.+||.+... .. .+|+|||++||.|+|.+|+.+|+++||.++|++|+..+.. +.+. ....||
T Consensus 268 ~~g~~~~~~-~~-----v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~------------~~~~iP 329 (926)
T 1xf1_A 268 NRGTKEDDF-KD-----VKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELP------------NVDQMP 329 (926)
T ss_dssp TTSCSTTTT-TT-----CTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECC------------CSTTCC
T ss_pred CCCCCccch-hh-----cCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccC------------cccccc
Confidence 357875432 23 3699999999999999999999999999999998764432 2211 135799
Q ss_pred EEEEeHHHHHHHHH
Q 015599 161 SALIDRAFGLSLKE 174 (404)
Q Consensus 161 sv~Is~~dG~~L~~ 174 (404)
+++|++++|+.|+.
T Consensus 330 ~~~i~~~~g~~l~~ 343 (926)
T 1xf1_A 330 AAFISRKDGLLLKD 343 (926)
T ss_dssp EEEECHHHHHHHHH
T ss_pred EEEEeHHHHHHHHh
Confidence 99999999998884
No 8
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=97.75 E-value=4.4e-05 Score=77.84 Aligned_cols=89 Identities=25% Similarity=0.304 Sum_probs=63.5
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEecCCC-----CHHHHHHHHHHcCCcEEEEEECCCCC-c---cccCCCCCCcccCCC
Q 015599 83 SGCQPFEGDKPFKSKFPRPTVLLLDRGEC-----YFALKVWHGQQAGAAAVLVADSVDEP-L---ITMDSPEESTDANGY 153 (404)
Q Consensus 83 ~gC~~~~~~~~~~~~~~~g~IvLV~RG~C-----sF~~Kv~nAQ~aGA~avII~nn~~~~-l---~~m~~~~d~~~~~~~ 153 (404)
.+|.+... .+.....+++|+|++||.| +|..|+.+|+++||+++||+|+.+.+ + ..+. .
T Consensus 258 ~~C~~~~~--~~~~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~----------~ 325 (441)
T 1y9z_A 258 AECTVNGT--SFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVD----------A 325 (441)
T ss_dssp EEEEEETT--EEECCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEEC----------T
T ss_pred hccccccc--cccCCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccc----------c
Confidence 45765431 1222233699999999987 89999999999999999999886421 1 1111 1
Q ss_pred ccccCceEEEEeHHHHHHHHHHHhcCCEEEEE
Q 015599 154 VEKIGIPSALIDRAFGLSLKEALKKGEEVVIK 185 (404)
Q Consensus 154 ~~~i~IPsv~Is~~dG~~L~~~l~~g~~V~v~ 185 (404)
.....||+++|++++|+.|++++. ..++++
T Consensus 326 ~~~~~~p~~~v~~~~g~~l~~~~~--~~~t~~ 355 (441)
T 1y9z_A 326 NSDITVPSVSVDRATGLALKAKLG--QSTTVS 355 (441)
T ss_dssp TCCCCSCEEEECHHHHHHHHTTTT--SEEEEE
T ss_pred ccCccccEEEEeHHHHHHHHHHhc--CCcccc
Confidence 124689999999999999998874 345554
No 9
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=94.85 E-value=0.041 Score=49.70 Aligned_cols=96 Identities=10% Similarity=0.244 Sum_probs=59.4
Q ss_pred HhhhhhhccccCCCchhhHHHHHHhhh-cCccchhhhHHHHHHHHHH-cCCChhhhccccCCccccccchHHHHHHHHHh
Q 015599 294 QLCVHRVANESNRSWVWWDYVTDFHIR-CSMKEKRYSKECAEEVMKS-LDLPIEKIRKCIGDPEADVENEVLKTEQEFQV 371 (404)
Q Consensus 294 qlci~~~~~~~~~~~~WW~Yv~~f~~~-C~~~~~~y~~~C~~~v~~~-l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~ 371 (404)
-.|+++.... ++|+|.+..-.. -.......+.+=-.+++.+ +|+|.+++++|+.++.. ...++++...-.
T Consensus 86 a~a~~~~~~~-----~f~~~~~aLf~~~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~---~~~v~~~~~~a~ 157 (202)
T 3gha_A 86 SEEVWKEDPD-----SFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETF---ASQVEKDSDLNQ 157 (202)
T ss_dssp HHHHHHHCGG-----GHHHHHHHHHHHCCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTT---HHHHHHHHHHHH
T ss_pred HHHHHhhCHH-----HHHHHHHHHHHhCccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHH---HHHHHHHHHHHH
Confidence 3466554444 799998864332 2111111223445677888 99999999999965532 223444433221
Q ss_pred cCCCCCceEEeeEEEEcCeeeeccCCcccc
Q 015599 372 GRGSRGDVTILPTLVINDVQYRGLLFNEQL 401 (404)
Q Consensus 372 ~~~~~~~v~~~Ptl~IN~~~yrG~l~~~~v 401 (404)
. .+|.--||++|||+.+.|..+.+.+
T Consensus 158 ~----~gV~gtPtfvvnG~~~~G~~~~e~l 183 (202)
T 3gha_A 158 K----MNIQATPTIYVNDKVIKNFADYDEI 183 (202)
T ss_dssp H----TTCCSSCEEEETTEECSCTTCHHHH
T ss_pred H----cCCCcCCEEEECCEEecCCCCHHHH
Confidence 2 3478899999999999997765543
No 10
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=93.24 E-value=0.16 Score=44.48 Aligned_cols=95 Identities=18% Similarity=0.187 Sum_probs=57.3
Q ss_pred HhhhhhhccccCCCchhhHHHHHHhhhc-CccchhhhHHHHHHHHHHcCCChhh---hcccc--CCccccccchHHHHHH
Q 015599 294 QLCVHRVANESNRSWVWWDYVTDFHIRC-SMKEKRYSKECAEEVMKSLDLPIEK---IRKCI--GDPEADVENEVLKTEQ 367 (404)
Q Consensus 294 qlci~~~~~~~~~~~~WW~Yv~~f~~~C-~~~~~~y~~~C~~~v~~~l~id~~~---i~~C~--~~~~~d~~n~iL~~e~ 367 (404)
-+|+.+...+ .+|+|.+..-..- .......+.+--.++++++|+|..+ +++|+ .++. .. ..++++.
T Consensus 68 ~~~a~~~~~~-----~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~~--~~-~~v~~~~ 139 (186)
T 3bci_A 68 SHAVLMYAPK-----SFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSK--SW-KAAEKDK 139 (186)
T ss_dssp HHHHHHHCGG-----GHHHHHHHHHHTCCCTTSCCCCHHHHHHHHHTTCCCHHHHHHHHHHHHSTTCH--HH-HHHHHHH
T ss_pred HHHHHHhCHH-----HHHHHHHHHHhcCcccCCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcCHH--HH-HHHHHHH
Confidence 3455544323 6888887643321 1001112345566788899999999 99998 5432 12 2344443
Q ss_pred HHHhcCCCCCceEEeeEEEEcCeeeeccCCccc
Q 015599 368 EFQVGRGSRGDVTILPTLVINDVQYRGLLFNEQ 400 (404)
Q Consensus 368 ~~q~~~~~~~~v~~~Ptl~IN~~~yrG~l~~~~ 400 (404)
..-.. .+|...||++|||+.+.|..+.+.
T Consensus 140 ~~a~~----~gv~GtPt~vvnG~~~~G~~~~~~ 168 (186)
T 3bci_A 140 KIAKD----NHIKTTPTAFINGEKVEDPYDYES 168 (186)
T ss_dssp HHHHH----TTCCSSSEEEETTEECSCTTCHHH
T ss_pred HHHHH----cCCCCCCeEEECCEEcCCCCCHHH
Confidence 32212 347889999999999988765544
No 11
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=92.75 E-value=0.19 Score=43.26 Aligned_cols=82 Identities=12% Similarity=0.172 Sum_probs=54.5
Q ss_pred hhhHHHHHHhhhcCccchhhhHHHHHHHHHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEc
Q 015599 309 VWWDYVTDFHIRCSMKEKRYSKECAEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVIN 388 (404)
Q Consensus 309 ~WW~Yv~~f~~~C~~~~~~y~~~C~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN 388 (404)
.+|+|.+..-..= ...+.+--.+++.++|+|..++++|+.++. ....++++...-.. .+|.-.||++||
T Consensus 83 ~~~~~~~~lf~~~----~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~---~~~~v~~~~~~a~~----~gv~gtPt~~i~ 151 (175)
T 3gyk_A 83 KYEAFHWALMGMS----GKANETGVLRIAREVGLDTEQLQRDMEAPE---VTAHIAQSMALAQK----LGFNGTPSFVVE 151 (175)
T ss_dssp CHHHHHHHHHTCS----SCCSHHHHHHHHHHTTCCHHHHHHHTTCHH---HHHHHHHHHHHHHH----HTCCSSSEEEET
T ss_pred HHHHHHHHHHhcC----CCCCHHHHHHHHHHcCCCHHHHHHHHhChH---HHHHHHHHHHHHHH----cCCccCCEEEEC
Confidence 5788877653321 123455667789999999999999986553 12233433332212 347889999999
Q ss_pred CeeeeccCCcccc
Q 015599 389 DVQYRGLLFNEQL 401 (404)
Q Consensus 389 ~~~yrG~l~~~~v 401 (404)
|+.+.|..+.+.+
T Consensus 152 g~~~~G~~~~~~l 164 (175)
T 3gyk_A 152 DALVPGFVEQSQL 164 (175)
T ss_dssp TEEECSCCCHHHH
T ss_pred CEEeeCCCCHHHH
Confidence 9999998766543
No 12
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=90.50 E-value=0.079 Score=48.13 Aligned_cols=62 Identities=15% Similarity=0.209 Sum_probs=42.1
Q ss_pred HHHHHHHcCCChhhhccccCCccccccchHHHHHHHHH-hcCCCCCceEEeeEEEEcCeeeeccCCcccc
Q 015599 333 AEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQ-VGRGSRGDVTILPTLVINDVQYRGLLFNEQL 401 (404)
Q Consensus 333 ~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q-~~~~~~~~v~~~Ptl~IN~~~yrG~l~~~~v 401 (404)
-.+++.++|+|..++++|+.++. ....++++...- .. .+|.--||++|||+.+.|..+.+.+
T Consensus 126 L~~~a~~~Gld~~~~~~~l~s~~---~~~~v~~~~~~a~~~----~GV~GtPtfvvng~~~~G~~~~e~l 188 (205)
T 3gmf_A 126 FYDFMAARGMDRSTLDRCLSNEA---LAKKLAAETDEAINQ----YNVSGTPSFMIDGILLAGTHDWASL 188 (205)
T ss_dssp HHHHHHTTTCCHHHHHHHHTCHH---HHHHHHHHHHHHHHH----HCCCSSSEEEETTEECTTCCSHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHcCHH---HHHHHHHHHHHHHHH----cCCccCCEEEECCEEEeCCCCHHHH
Confidence 34567789999999999997542 122333332221 11 2378899999999999998776543
No 13
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=88.26 E-value=0.78 Score=48.47 Aligned_cols=62 Identities=16% Similarity=0.221 Sum_probs=49.8
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHHcCCcEEEEEECCCCCccccCCCCCCcccCCCccccCceEEEEeHHHHHHHHHHHhc
Q 015599 99 PRPTVLLLDRGECYFALKVWHGQQAGAAAVLVADSVDEPLITMDSPEESTDANGYVEKIGIPSALIDRAFGLSLKEALKK 178 (404)
Q Consensus 99 ~~g~IvLV~RG~CsF~~Kv~nAQ~aGA~avII~nn~~~~l~~m~~~~d~~~~~~~~~~i~IPsv~Is~~dG~~L~~~l~~ 178 (404)
..++|+|.+| .|..|..+++.+||.++|++++..+. .....+|++.|+.++|..|+..+..
T Consensus 280 v~gkivl~~~---~~~~~~~~~~~~Ga~gvi~~~~~~~~----------------~~~~~lP~~~v~~~~g~~i~~~~~~ 340 (621)
T 3vta_A 280 LKGKIVVCEA---SFGPHEFFKSLDGAAGVLMTSNTRDY----------------ADSYPLPSSVLDPNDLLATLRYIYS 340 (621)
T ss_dssp TTTSEEECSS---CCCHHHHHHHHTTCSEEEEECSCCSS----------------CCCCSSSEEEECHHHHHHHHHHHHH
T ss_pred ccceEEEEec---CCChhHHhhhhcceeEEEEEecCCCc----------------ccccccceEEECHHHHHHHHHHHhc
Confidence 3699999875 57789999999999999999875321 1135689999999999999998875
Q ss_pred C
Q 015599 179 G 179 (404)
Q Consensus 179 g 179 (404)
.
T Consensus 341 ~ 341 (621)
T 3vta_A 341 I 341 (621)
T ss_dssp H
T ss_pred c
Confidence 3
No 14
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=85.79 E-value=0.25 Score=43.84 Aligned_cols=61 Identities=13% Similarity=0.102 Sum_probs=42.5
Q ss_pred HHHHHHHHHHc-CCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEcCeeeeccCC
Q 015599 330 KECAEEVMKSL-DLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVINDVQYRGLLF 397 (404)
Q Consensus 330 ~~C~~~v~~~l-~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN~~~yrG~l~ 397 (404)
.+=-.+++.++ |+|..++++|+.++. ....++++...-.. .+|.-.||++|||+.+.|...
T Consensus 109 ~~~l~~~a~~~~Gld~~~~~~~~~s~~---~~~~v~~~~~~a~~----~gv~gtPt~vvng~~~~~~~~ 170 (193)
T 3hz8_A 109 PEVLKKWLGEQTAFDGKKVLAAYESPE---SQARADKMQELTET----FQIDGVPTVIVGGKYKVEFAD 170 (193)
T ss_dssp HHHHHHHHHHCTTTTHHHHHHHHHSHH---HHHHHHHHHHHHHH----TTCCSSSEEEETTTEEECCSS
T ss_pred HHHHHHHHHHccCCCHHHHHHHHcCHH---HHHHHHHHHHHHHH----hCCCcCCEEEECCEEEecCCC
Confidence 44556788889 999999999986542 22334444332212 347889999999999998653
No 15
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=85.44 E-value=0.35 Score=43.05 Aligned_cols=61 Identities=15% Similarity=0.102 Sum_probs=42.0
Q ss_pred HHHHHHHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEcCeeeeccCCcc
Q 015599 332 CAEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVINDVQYRGLLFNE 399 (404)
Q Consensus 332 C~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN~~~yrG~l~~~ 399 (404)
=-.+++.++|+|.+++.+|+.++.. ...++++...-.. .+|...|+++|||+.+.|.-..+
T Consensus 125 ~L~~~a~~~Gld~~~~~~~~~s~~~---~~~v~~~~~~a~~----~Gv~G~Ptfvi~g~~~~G~~~~~ 185 (203)
T 2imf_A 125 LPALVSEKLGWDRSAFEHFLSSNAA---TERYDEQTHAAIE----RKVFGVPTMFLGDEMWWGNDRLF 185 (203)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHSHHH---HHHHHHHHHHHHH----TTCCSSSEEEETTEEEESGGGHH
T ss_pred HHHHHHHHcCCCHHHHHHHhcCHHH---HHHHHHHHHHHHH----CCCCcCCEEEECCEEEECCCCHH
Confidence 3467788899999999999865421 2234443332222 34888999999999999975443
No 16
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=85.08 E-value=0.41 Score=41.90 Aligned_cols=84 Identities=15% Similarity=0.056 Sum_probs=50.7
Q ss_pred hhhHHHHHHhhhcCc-cchhhhHHHHHHHHHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEE
Q 015599 309 VWWDYVTDFHIRCSM-KEKRYSKECAEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVI 387 (404)
Q Consensus 309 ~WW~Yv~~f~~~C~~-~~~~y~~~C~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~I 387 (404)
.+|+|.+..-..-.. .....+.+--.+++.++|+|..++++|+.++. ....++++...-.. .+|...||++|
T Consensus 86 ~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~---~~~~v~~~~~~a~~----~gv~gtPt~~v 158 (192)
T 3h93_A 86 VEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLSTYNSFA---IKGQMEKAKKLAMA----YQVTGVPTMVV 158 (192)
T ss_dssp CCHHHHHHHHHHHHTSCCCCCSHHHHHHHHHTTTCCHHHHHHHHTCHH---HHHHHHHHHHHHHH----HTCCSSSEEEE
T ss_pred CHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHcCCCHHHHHHHhhCHH---HHHHHHHHHHHHHH----hCCCCCCeEEE
Confidence 467776653322110 11112355667888999999999999986542 22234444332212 23788999999
Q ss_pred cCeeee---ccCCcc
Q 015599 388 NDVQYR---GLLFNE 399 (404)
Q Consensus 388 N~~~yr---G~l~~~ 399 (404)
||+.+. |-...+
T Consensus 159 ng~~~~~~~G~~~~e 173 (192)
T 3h93_A 159 NGKYRFDIGSAGGPE 173 (192)
T ss_dssp TTTEEEEHHHHTSHH
T ss_pred CCEEEecccccCCHH
Confidence 999875 655443
No 17
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=84.14 E-value=0.39 Score=42.93 Aligned_cols=83 Identities=16% Similarity=0.111 Sum_probs=50.5
Q ss_pred hhhHHHHHHhhhcCccc-hhhhHHHHHHHHHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEE
Q 015599 309 VWWDYVTDFHIRCSMKE-KRYSKECAEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVI 387 (404)
Q Consensus 309 ~WW~Yv~~f~~~C~~~~-~~y~~~C~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~I 387 (404)
+.|+|....-..-.... +.-+.+--.+++.++|+|.+++.+|+.++. ....++++...-.. .+|.-.||++|
T Consensus 107 ~~~~~~~alf~a~~~~g~~i~~~~~L~~~a~~~Gld~~~~~~~~~s~~---~~~~v~~~~~~a~~----~Gv~GvPtfvv 179 (202)
T 3fz5_A 107 AATAFAQRVFDLYFSDRLDTASPEAVSRLGPEVGLEPEALLAGIADPA---LKETVRKIGEDAVA----RGIFGSPFFLV 179 (202)
T ss_dssp HHHHHHHHHHHHHTTTCCCTTCHHHHHTTHHHHTCCHHHHHHHTTCHH---HHHHHHHHHHHHHH----TTCCSSSEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHcCCCHHHHHHHhcCHH---HHHHHHHHHHHHHH----CCCCcCCEEEE
Confidence 46677666443221111 111244556677888999999999986542 22234443332222 24888999999
Q ss_pred cCeeeeccCCc
Q 015599 388 NDVQYRGLLFN 398 (404)
Q Consensus 388 N~~~yrG~l~~ 398 (404)
||+.|.|.-..
T Consensus 180 ~g~~~~G~~~~ 190 (202)
T 3fz5_A 180 DDEPFWGWDRM 190 (202)
T ss_dssp TTEEEESGGGH
T ss_pred CCEEEecCCCH
Confidence 99999997543
No 18
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=83.86 E-value=0.61 Score=40.91 Aligned_cols=60 Identities=8% Similarity=0.087 Sum_probs=41.7
Q ss_pred HHHHHHHHHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEcCeeeeccC
Q 015599 330 KECAEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVINDVQYRGLL 396 (404)
Q Consensus 330 ~~C~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN~~~yrG~l 396 (404)
.+=-.++++++|+|..++++|+.++. ....++++...-.. .+|...||++|||+.+.|--
T Consensus 107 ~~~l~~~a~~~Gld~~~~~~~~~s~~---~~~~v~~~~~~a~~----~gv~gtPt~ving~~~~~g~ 166 (195)
T 3hd5_A 107 KKAMGEWAASQGVDRAKFDSVFDSFS---VQTQVQRASQLAEA----AHIDGTPAFAVGGRYMTSPV 166 (195)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHTCHH---HHHHHHHHHHHHHH----TTCCSSSEEEETTTEEECTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHcCHH---HHHHHHHHHHHHHH----hCCCcCceEEECCEEEeCcc
Confidence 45566788899999999999986542 22344444332222 34788999999999887643
No 19
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=83.24 E-value=0.81 Score=39.18 Aligned_cols=54 Identities=9% Similarity=0.129 Sum_probs=37.1
Q ss_pred HHHHHHHHHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEcCe
Q 015599 330 KECAEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVINDV 390 (404)
Q Consensus 330 ~~C~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN~~ 390 (404)
..=-.++++++|+|..++++|+.++. ....++++...-. +.+|.--||++|||+
T Consensus 106 ~~~l~~~a~~~Gld~~~~~~~~~s~~---~~~~v~~~~~~a~----~~gv~gTPtfiINGk 159 (184)
T 4dvc_A 106 EQELRQIFLDEGIDAAKFDAAYNGFA---VDSMVHRFDKQFQ----DSGLTGVPAVVVNNR 159 (184)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHTSHH---HHHHHHHHHHHHH----HHTCCSSSEEEETTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHhCHH---HHHHHHHHHHHHH----HcCCCcCCEEEECCE
Confidence 44567788999999999999996543 2233444333221 234788999999996
No 20
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=83.04 E-value=0.29 Score=45.05 Aligned_cols=83 Identities=12% Similarity=0.212 Sum_probs=50.5
Q ss_pred hhhHHHHHHhhh-cCccc-hhhhHHHHHHHHHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEE
Q 015599 309 VWWDYVTDFHIR-CSMKE-KRYSKECAEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLV 386 (404)
Q Consensus 309 ~WW~Yv~~f~~~-C~~~~-~~y~~~C~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~ 386 (404)
++|+|.+..-.. -.... .....+=-.++++++|+|.+++++|+.++. ....++++...-.. +.+|.--||++
T Consensus 103 ~f~~~~~aLF~~q~~~~~~~~~~~~~L~~iA~~~Gld~~~~~~~l~s~~---~~~~v~~~~~~a~~---~~GV~GtPtfv 176 (226)
T 3f4s_A 103 DYFNFNKAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKK---IMDKIVNDKSLAIN---KLGITAVPIFF 176 (226)
T ss_dssp HHHHHHHHHHHTGGGSCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHH---HHHHHHHHHHHHHH---HHCCCSSCEEE
T ss_pred HHHHHHHHHHHhCHhhcccccCcHHHHHHHHHHcCCCHHHHHHHHhCHH---HHHHHHHHHHHHHH---HcCCCcCCEEE
Confidence 678887764332 11100 011234456788899999999999986542 22233443332112 02378899999
Q ss_pred E---cCeeeeccCC
Q 015599 387 I---NDVQYRGLLF 397 (404)
Q Consensus 387 I---N~~~yrG~l~ 397 (404)
| ||+.+.|..+
T Consensus 177 v~~~nG~~~~Ga~~ 190 (226)
T 3f4s_A 177 IKLNDDKSYIEHNK 190 (226)
T ss_dssp EEECCTTCCCCGGG
T ss_pred EEcCCCEEeeCCCC
Confidence 9 9999998766
No 21
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=82.45 E-value=0.36 Score=42.14 Aligned_cols=59 Identities=12% Similarity=0.190 Sum_probs=39.6
Q ss_pred HHHHHHHHHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEcCeee-ecc
Q 015599 330 KECAEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVINDVQY-RGL 395 (404)
Q Consensus 330 ~~C~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN~~~y-rG~ 395 (404)
.+=-.++++++|+|..+++.|+.++. ....++++...-.. .+|...||++|||+.+ .|.
T Consensus 111 ~~~l~~~a~~~Gld~~~~~~~~~~~~---~~~~v~~~~~~a~~----~gv~gtPt~ving~~~~~g~ 170 (193)
T 2rem_A 111 PDELAVFYAGYGVQPDRFVATFNGPE---VEKRFQAARAYALK----VRPVGTPTIVVNGRYMVTGH 170 (193)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHTSHH---HHHHHHHHHHHHHH----HCCSSSSEEEETTTEEECCS
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhChH---HHHHHHHHHHHHHH----hCCCCCCeEEECCEEEecCC
Confidence 34456788889999999999986542 12344444332212 2478899999999876 665
No 22
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=81.55 E-value=1.3 Score=38.88 Aligned_cols=55 Identities=13% Similarity=0.175 Sum_probs=38.0
Q ss_pred HHHHHHHHHHc-CCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEcCee
Q 015599 330 KECAEEVMKSL-DLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVINDVQ 391 (404)
Q Consensus 330 ~~C~~~v~~~l-~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN~~~ 391 (404)
.+=-.+++.++ |+|..++++|+.++. ....++++...-.. .+|.--||++|||+.
T Consensus 100 ~~~l~~~a~~~~Gld~~~~~~~~~s~~---~~~~v~~~~~~a~~----~gv~GtPt~~vng~~ 155 (189)
T 3l9v_A 100 PDDVRRVFMSATGISRGEYDRSIKSPA---VNDMVALQERLFKE----YGVRGTPSVYVRGRY 155 (189)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHTTSHH---HHHHHHHHHHHHHH----TTCCSSSEEEETTTE
T ss_pred HHHHHHHHHHccCCCHHHHHHHHhhHH---HHHHHHHHHHHHHH----hCCCccCEEEECCEE
Confidence 45567788888 999999999986543 22344444332222 347889999999974
No 23
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=79.53 E-value=0.89 Score=40.34 Aligned_cols=56 Identities=7% Similarity=0.040 Sum_probs=38.8
Q ss_pred HHHHHHHHHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEcCeee
Q 015599 330 KECAEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVINDVQY 392 (404)
Q Consensus 330 ~~C~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN~~~y 392 (404)
.+=-.+++.++|+|.+++++|+.++. ....++++...-.. .+|.-.||++|||+..
T Consensus 107 ~~~L~~~a~~~Gld~~~~~~~~~s~~---~~~~v~~~~~~a~~----~gv~gtPtfvvnG~~~ 162 (191)
T 3l9s_A 107 AADIRKVFVDAGVKGEDYDAAWNSFV---VKSLVAQQEKAAAD----LQLQGVPAMFVNGKYQ 162 (191)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHTSHH---HHHHHHHHHHHHHH----TTCCSSSEEEETTTEE
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhCHH---HHHHHHHHHHHHHH----hCCcccCEEEECCEEE
Confidence 44567788999999999999986543 23344444332222 3478899999999854
No 24
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=78.31 E-value=0.92 Score=41.83 Aligned_cols=85 Identities=15% Similarity=0.143 Sum_probs=51.2
Q ss_pred hhhHHHHHHhhhcCccc-hhhh-HHHHHHHHHHcCCChhhhccccCC-ccccccchHHHHHHHHHhcCCCCCceEEeeEE
Q 015599 309 VWWDYVTDFHIRCSMKE-KRYS-KECAEEVMKSLDLPIEKIRKCIGD-PEADVENEVLKTEQEFQVGRGSRGDVTILPTL 385 (404)
Q Consensus 309 ~WW~Yv~~f~~~C~~~~-~~y~-~~C~~~v~~~l~id~~~i~~C~~~-~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl 385 (404)
..|.|....-..-.... +.-. .+=-..++.++|+|.+++++|+.+ +. ....++++...-.. .+|.-.|++
T Consensus 115 ~~~~~~~alf~a~~~~g~~i~d~~~~L~~~a~~~Gld~~~~~~~l~s~~~---~~~~v~~~~~~a~~----~Gv~GvPtf 187 (239)
T 3gl5_A 115 RHEALLDAFYRGNFADERSVFNDDERLVELAVGAGLDAEEVRAVLADPAA---YADEVRADEREAAQ----LGATGVPFF 187 (239)
T ss_dssp CHHHHHHHHHHHHHTCSSCCSSCHHHHHHHHHHTTCCHHHHHHHHHCTTT---THHHHHHHHHHHHH----TTCCSSSEE
T ss_pred cHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHcCCCHHHHHHHHcCcHh---HHHHHHHHHHHHHH----CCCCeeCeE
Confidence 45666665443221111 1122 345567888999999999999876 42 22234444332222 248899999
Q ss_pred EEcCe-eeeccCCccc
Q 015599 386 VINDV-QYRGLLFNEQ 400 (404)
Q Consensus 386 ~IN~~-~yrG~l~~~~ 400 (404)
+|||+ .+.|.-..+.
T Consensus 188 vv~g~~~v~Ga~~~e~ 203 (239)
T 3gl5_A 188 VLDRAYGVSGAQPAEV 203 (239)
T ss_dssp EETTTEEEESSCCHHH
T ss_pred EECCcEeecCCCCHHH
Confidence 99997 6788655443
No 25
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=77.74 E-value=0.67 Score=40.48 Aligned_cols=60 Identities=13% Similarity=0.022 Sum_probs=40.0
Q ss_pred HHHHHHHHHc-CCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEcCee-eeccCC
Q 015599 331 ECAEEVMKSL-DLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVINDVQ-YRGLLF 397 (404)
Q Consensus 331 ~C~~~v~~~l-~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN~~~-yrG~l~ 397 (404)
+=-.+++.++ |+|..+++.|+.++. ....++++...-.. .+|...||++|||+. ..|..+
T Consensus 106 ~~l~~~a~~~~Gld~~~~~~~~~~~~---~~~~v~~~~~~a~~----~gv~gtPt~ving~~~~~g~~~ 167 (195)
T 2znm_A 106 SVAGKWALSQKGFDGKKLMRAYDSPE---AAAAALKMQKLTEQ----YRIDSTPTVIVGGKYRVIFNNG 167 (195)
T ss_dssp HHHHHHHHTCSSSCHHHHHHHHTSHH---HHHHHHHHHHHHHH----TTCCSSSEEEETTTEEECCCSH
T ss_pred HHHHHHHHHcCCCCHHHHHHHhcCHH---HHHHHHHHHHHHHH----cCCCCCCeEEECCEEEEcCCCC
Confidence 3445678888 999999999986542 22344444332212 347889999999984 666543
No 26
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=70.62 E-value=1.7 Score=38.81 Aligned_cols=60 Identities=7% Similarity=0.041 Sum_probs=39.0
Q ss_pred HHHHHHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEcCeeeec--cCCcc
Q 015599 333 AEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVINDVQYRG--LLFNE 399 (404)
Q Consensus 333 ~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN~~~yrG--~l~~~ 399 (404)
-.+++.++|+|..+++.|+.++. ....++++...--. .+|.-.|+++|||+.+.. .++.+
T Consensus 9 L~~~a~~~Gld~~~~~~~l~s~~---~~~~v~~~~~~a~~----~gi~gvP~fvingk~~~~~~~~~~~ 70 (197)
T 1un2_A 9 IRDVFINAGIKGEEYDAAWNSFV---VKSLVAQQEKAAAD----VQLRGVPAMFVNGKYQLNPQGMDTS 70 (197)
T ss_dssp HHHHHHHHTCCHHHHHHHHTSHH---HHHHHHHHHHHHHH----TTCCSSSEEEETTTEEECGGGSCCS
T ss_pred HHHHHHHcCCCHHHHHHHHhCHH---HHHHHHHHHHHHHH----cCCCcCCEEEEcceEecCccccccc
Confidence 45678889999999999986542 22345444332212 236679999999986653 44443
No 27
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=68.86 E-value=1.8 Score=38.26 Aligned_cols=85 Identities=11% Similarity=0.107 Sum_probs=48.7
Q ss_pred hhhHHHHHHhhhcCccchhh-hHHHHHHHHHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEE
Q 015599 309 VWWDYVTDFHIRCSMKEKRY-SKECAEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVI 387 (404)
Q Consensus 309 ~WW~Yv~~f~~~C~~~~~~y-~~~C~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~I 387 (404)
+.|+|.+..-..-....... +.+=-.++++++|+|.+++++|+.++.. ...++++...-.. .+|...||++|
T Consensus 110 ~~~~~~~~lf~a~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~---~~~v~~~~~~a~~----~gv~g~Pt~~i 182 (216)
T 2in3_A 110 KVFPFFAAIQRAFYVGQEDVAQLAILKKLAVDLGIPESRFTPVFQSDEA---KQRTLAGFQRVAQ----WGISGFPALVV 182 (216)
T ss_dssp GHHHHHHHHHHHHHTTCCCTTSHHHHHHHHHHTTCCHHHHHHHHHSHHH---HHHHHHHHHHHHH----TTCCSSSEEEE
T ss_pred hHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHcCCCHHHHHHHhcchHH---HHHHHHHHHHHHH----cCCcccceEEE
Confidence 46777665433211010111 1333467788899999999999865421 2233333322212 34889999988
Q ss_pred --cCee---eeccCCccc
Q 015599 388 --NDVQ---YRGLLFNEQ 400 (404)
Q Consensus 388 --N~~~---yrG~l~~~~ 400 (404)
||+. +.|....+.
T Consensus 183 ~~~G~~~~~~~G~~~~~~ 200 (216)
T 2in3_A 183 ESGTDRYLITTGYRPIEA 200 (216)
T ss_dssp EETTEEEEEESSCCCHHH
T ss_pred EECCEEEEeccCCCCHHH
Confidence 9984 777655443
No 28
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=58.97 E-value=1.6 Score=34.78 Aligned_cols=25 Identities=36% Similarity=0.505 Sum_probs=21.4
Q ss_pred ceEEeeEEEEcCeeeeccCCccccc
Q 015599 378 DVTILPTLVINDVQYRGLLFNEQLV 402 (404)
Q Consensus 378 ~v~~~Ptl~IN~~~yrG~l~~~~v~ 402 (404)
+|..+||++|||..|.|..+.+.+.
T Consensus 63 ~V~~~PT~~i~G~~~~G~~~~~~l~ 87 (106)
T 3kp8_A 63 GITSYPTWIINGRTYTGVRSLEALA 87 (106)
T ss_dssp TCCSSSEEEETTEEEESCCCHHHHH
T ss_pred CCeEeCEEEECCEEecCCCCHHHHH
Confidence 4788999999999999998877654
No 29
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=57.20 E-value=2.4 Score=36.62 Aligned_cols=49 Identities=12% Similarity=0.247 Sum_probs=32.4
Q ss_pred HHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEcCeee
Q 015599 337 MKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVINDVQY 392 (404)
Q Consensus 337 ~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN~~~y 392 (404)
++++|+|.+++++|+.++.. ...++++...- .+.+|.-.||++|||+..
T Consensus 125 a~~~Gld~~~~~~~~~~~~~---~~~v~~~~~~a----~~~gv~gtPt~~ing~~~ 173 (195)
T 3c7m_A 125 LDAAGMSQADFEAALKEPAV---QETLEKWKASY----DVAKIQGVPAYVVNGKYL 173 (195)
T ss_dssp HHHHTCCHHHHHHHHTSHHH---HHHHHHGGGHH----HHHHHHCSSEEEETTTEE
T ss_pred HHHcCCCHHHHHHHHcChHH---HHHHHHHHHHH----HHcCCCccCEEEECCEEE
Confidence 88899999999999865421 12333332211 113478899999999753
No 30
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=56.41 E-value=2.7 Score=36.79 Aligned_cols=62 Identities=15% Similarity=0.141 Sum_probs=39.8
Q ss_pred HHHHHHHHHHcCC-ChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEcCeee---eccCCcc
Q 015599 330 KECAEEVMKSLDL-PIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVINDVQY---RGLLFNE 399 (404)
Q Consensus 330 ~~C~~~v~~~l~i-d~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN~~~y---rG~l~~~ 399 (404)
.+=-.+++.++|+ |..++++|+.+ . .. ..++++...-.. .+|...||++|||+.. +|-...+
T Consensus 108 ~~~L~~~a~~~Gl~d~~~~~~~~~~-~--~~-~~v~~~~~~a~~----~gv~GtPtfvvng~~~v~~~Ga~~~e 173 (185)
T 3feu_A 108 QEAYSKAFTSRGLVSPYDFNEEQRD-T--LI-KKVDNAKMLSEK----SGISSVPTFVVNGKYNVLIGGHDDPK 173 (185)
T ss_dssp HHHHHHHHHTTTCCCGGGCCHHHHH-H--HH-HHHHHHHHHHHH----HTCCSSSEEEETTTEEECGGGCSSHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHH-H--HH-HHHHHHHHHHHH----cCCCccCEEEECCEEEEecCCCCCHH
Confidence 4455678889998 99999999753 1 12 234433332212 3478899999999842 6755543
No 31
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=53.03 E-value=5.2 Score=35.33 Aligned_cols=73 Identities=10% Similarity=0.170 Sum_probs=43.1
Q ss_pred hhHHHHHHhhhcCccc-hhhhHHHHHHHHHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEc
Q 015599 310 WWDYVTDFHIRCSMKE-KRYSKECAEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVIN 388 (404)
Q Consensus 310 WW~Yv~~f~~~C~~~~-~~y~~~C~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN 388 (404)
.|+|....-..-.... +..+.+=-.+++.++|+|.+++++|+.++. ....++++...-.. .+|...||++||
T Consensus 104 ~~~~~~~l~~a~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~---~~~~v~~~~~~a~~----~gv~g~Pt~~v~ 176 (208)
T 3kzq_A 104 YEQMLEAIQHAYYLRAMPPHEEATHLQLAKEIGLNVQQFKNDMDGTL---LEGVFQDQLSLAKS----LGVNSYPSLVLQ 176 (208)
T ss_dssp HHHHHHHHHHHHHTSCCCTTCHHHHHHHHHHTTCCHHHHHHHHTSHH---HHHHHHHHHHHHHH----TTCCSSSEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHcCCCHHHHHHHHhChH---HHHHHHHHHHHHHH----cCCCcccEEEEE
Confidence 3666665443211111 122245567788999999999999986542 22334444332222 347889999997
Q ss_pred C
Q 015599 389 D 389 (404)
Q Consensus 389 ~ 389 (404)
+
T Consensus 177 ~ 177 (208)
T 3kzq_A 177 I 177 (208)
T ss_dssp E
T ss_pred E
Confidence 4
No 32
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=52.26 E-value=7.1 Score=35.01 Aligned_cols=82 Identities=10% Similarity=0.005 Sum_probs=46.9
Q ss_pred hhhHHHHHHhhhcCccch-hhhHHHHHHHHHHcCCC---hhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeE
Q 015599 309 VWWDYVTDFHIRCSMKEK-RYSKECAEEVMKSLDLP---IEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPT 384 (404)
Q Consensus 309 ~WW~Yv~~f~~~C~~~~~-~y~~~C~~~v~~~l~id---~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Pt 384 (404)
.+|+|.+..-..-..... .-+.+=-.+++.++|+| ..++.+|+.++. ....++++...-.. .+|.-.||
T Consensus 113 ~~~~~~~alf~a~~~~~~~i~~~~~L~~~a~~~Gl~~~d~~~~~~~~~s~~---~~~~v~~~~~~a~~----~gv~G~Pt 185 (226)
T 1r4w_A 113 MLEKVSRELWMRIWSRDEDITESQNILSAAEKAGMATAQAQHLLNKISTEL---VKSKLRETTGAACK----YGAFGLPT 185 (226)
T ss_dssp GHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHTTCCHHHHHHHHTTTTSHH---HHHHHHHHHHHHHH----TTCCSSCE
T ss_pred HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCCchhHHHHHHHcCCHH---HHHHHHHHHHHHHH----CCCCCCCE
Confidence 457777654322110101 11234456788899995 557788875432 22334444332222 34888999
Q ss_pred EEEc----CeeeeccCC
Q 015599 385 LVIN----DVQYRGLLF 397 (404)
Q Consensus 385 l~IN----~~~yrG~l~ 397 (404)
++|| +..+.|.-.
T Consensus 186 fvv~~~g~~~~~~G~~~ 202 (226)
T 1r4w_A 186 TVAHVDGKTYMLFGSDR 202 (226)
T ss_dssp EEEEETTEEEEEESTTC
T ss_pred EEEeCCCCcCceeCCCc
Confidence 9999 888888644
No 33
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=49.54 E-value=11 Score=34.28 Aligned_cols=63 Identities=13% Similarity=0.034 Sum_probs=36.8
Q ss_pred HHHHHHHHHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEc--C--eeeeccC
Q 015599 330 KECAEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVIN--D--VQYRGLL 396 (404)
Q Consensus 330 ~~C~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN--~--~~yrG~l 396 (404)
.+--..++.++|+|.+++++.......+.....|+++...-... +|.-.|+++|| | ..|.|.-
T Consensus 135 ~~~L~~~a~~~GLd~~~~~~~l~~~~s~~~~~~l~~~~~~a~~~----Gv~GvPtfvv~~~g~~~~f~G~d 201 (234)
T 3rpp_A 135 PQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRY----GAFGLPITVAHVDGQTHMLFGSD 201 (234)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHTTTTSHHHHHHHHHHHHHHHHT----TCSSSCEEEEEETTEEEEEESSS
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHccCHHHHHHHHHHHHHHHHc----CCCCCCEEEEeCCCCcCceeCcc
Confidence 45667788899999955554432111112223344433322222 47899999996 6 6788853
No 34
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=42.95 E-value=12 Score=32.63 Aligned_cols=52 Identities=17% Similarity=0.358 Sum_probs=32.3
Q ss_pred HHHHHHHcCCChhhhccccCCccccccchHHHHHHHHHhcCCCCCceEEeeEEEEcCeeeec
Q 015599 333 AEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVINDVQYRG 394 (404)
Q Consensus 333 ~~~v~~~l~id~~~i~~C~~~~~~d~~n~iL~~e~~~q~~~~~~~~v~~~Ptl~IN~~~yrG 394 (404)
-..+.+.+|+|.+++ +.++. ...-++++.+.-.. .+|.--||++|||+.+.|
T Consensus 116 l~~~a~~~Gld~~~~---l~~~~---~~~~v~~~~~~a~~----~GV~gtPtf~ing~~~~~ 167 (182)
T 3gn3_A 116 IARIERYSGLALAEA---FANPE---LEHAVKWHTKYARQ----NGIHVSPTFMINGLVQPG 167 (182)
T ss_dssp HHHHHHHHTCCCHHH---HHCGG---GHHHHHHHHHHHHH----HTCCSSSEEEETTEECTT
T ss_pred HHHHHHHhCCCHHHH---hcChH---HHHHHHHHHHHHHH----CCCCccCEEEECCEEccC
Confidence 456778899998887 43322 22233333222112 348889999999999864
No 35
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=40.89 E-value=5.8 Score=28.77 Aligned_cols=25 Identities=32% Similarity=0.417 Sum_probs=19.5
Q ss_pred CceEEeeEEEEcCee-eeccCCcccc
Q 015599 377 GDVTILPTLVINDVQ-YRGLLFNEQL 401 (404)
Q Consensus 377 ~~v~~~Ptl~IN~~~-yrG~l~~~~v 401 (404)
.+|..+||++|||.. +.|..+.+.+
T Consensus 52 ~~v~~~Pt~~~~G~~~~~G~~~~~~l 77 (85)
T 1fo5_A 52 YGIMAVPTIVINGDVEFIGAPTKEAL 77 (85)
T ss_dssp TTTCCSSEEEETTEEECCSSSSSHHH
T ss_pred CCCcccCEEEECCEEeeecCCCHHHH
Confidence 457789999999986 8887776654
No 36
>4f87_A Plycb; lysin, bacteriophage, antimicrobial protein, viral protein; 1.40A {Streptococcus phage C1} PDB: 4f88_A
Probab=36.74 E-value=16 Score=26.22 Aligned_cols=20 Identities=30% Similarity=0.325 Sum_probs=18.4
Q ss_pred CceEEEEeHHHHHHHHHHHh
Q 015599 158 GIPSALIDRAFGLSLKEALK 177 (404)
Q Consensus 158 ~IPsv~Is~~dG~~L~~~l~ 177 (404)
-||++-|+++|-++|+++++
T Consensus 52 iipsinisksdveairkamk 71 (72)
T 4f87_A 52 IIPSINISKSDVEAIRKAMK 71 (72)
T ss_dssp TSCEEECCGGGHHHHHHHHC
T ss_pred hCccccccHhHHHHHHHHhc
Confidence 58999999999999999875
No 37
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=36.43 E-value=6.8 Score=28.35 Aligned_cols=25 Identities=28% Similarity=0.430 Sum_probs=19.3
Q ss_pred CceEEeeEEEEcCee-eeccCCcccc
Q 015599 377 GDVTILPTLVINDVQ-YRGLLFNEQL 401 (404)
Q Consensus 377 ~~v~~~Ptl~IN~~~-yrG~l~~~~v 401 (404)
.+|..+||++|||.. +.|..+.+.+
T Consensus 51 ~~v~~~Pt~~~~G~~~~~G~~~~~~l 76 (85)
T 1nho_A 51 YGLMAVPAIAINGVVRFVGAPSREEL 76 (85)
T ss_dssp TCSSCSSEEEETTTEEEECSSCCHHH
T ss_pred CCceeeCEEEECCEEEEccCCCHHHH
Confidence 346789999999986 8887766554
No 38
>4b2v_A S64; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=36.37 E-value=15 Score=22.49 Aligned_cols=13 Identities=54% Similarity=1.641 Sum_probs=10.3
Q ss_pred ccccCCccccCCCC
Q 015599 262 QCINHGRYCAPDPE 275 (404)
Q Consensus 262 ~Ci~~Gryc~~dp~ 275 (404)
.|+-+|.+| |||+
T Consensus 2 ecvenggfc-pdpe 14 (32)
T 4b2v_A 2 ECVENGGFC-PDPE 14 (32)
T ss_dssp CCCCTTCBC-CCTT
T ss_pred chhhcCCcC-CChH
Confidence 588899998 6774
No 39
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=26.30 E-value=24 Score=29.67 Aligned_cols=24 Identities=21% Similarity=0.530 Sum_probs=19.6
Q ss_pred ceEEeeEEEEcCeeeeccCCcccc
Q 015599 378 DVTILPTLVINDVQYRGLLFNEQL 401 (404)
Q Consensus 378 ~v~~~Ptl~IN~~~yrG~l~~~~v 401 (404)
+|...||++|||+.+.|..+.+.+
T Consensus 146 gv~gtPt~vvng~~~~G~~~~~~l 169 (175)
T 1z6m_A 146 HIQFVPTIIIGEYIFDESVTEEEL 169 (175)
T ss_dssp TCCSSCEEEETTEEECTTCCHHHH
T ss_pred CCCCcCeEEECCEEccCCCCHHHH
Confidence 478899999999999998765543
No 40
>2hi6_A UPF0107 protein AF0055; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Archaeoglobus fulgidus} SCOP: c.8.2.3
Probab=25.78 E-value=70 Score=27.17 Aligned_cols=77 Identities=21% Similarity=0.356 Sum_probs=43.2
Q ss_pred CCCCCCCCCeEEEEe--cCCCCHHHHHHHHHHcC-CcEEEEEECCCCCccccCCCCCCcccCCCccccCceEE-EEeHHH
Q 015599 93 PFKSKFPRPTVLLLD--RGECYFALKVWHGQQAG-AAAVLVADSVDEPLITMDSPEESTDANGYVEKIGIPSA-LIDRAF 168 (404)
Q Consensus 93 ~~~~~~~~g~IvLV~--RG~CsF~~Kv~nAQ~aG-A~avII~nn~~~~l~~m~~~~d~~~~~~~~~~i~IPsv-~Is~~d 168 (404)
++..++-+|+|+++. ||.|+=..=.+.+...| |=++||... .+++.+.+.- -..||++ -+..
T Consensus 43 ~L~G~siagkILv~P~gkGSt~gS~vl~~l~~~g~aPaAiI~~~-~e~Il~~Gai-----------va~IP~vd~~~~-- 108 (141)
T 2hi6_A 43 EIKGESVAGRILVFPGGKGSTVGSYVLLNLRKNGVAPKAIINKK-TETIIAVGAA-----------MAEIPLVEVRDE-- 108 (141)
T ss_dssp SSTTCBCTTSEEEESCCSCCSSCTTHHHHHHHHTCSCSEEEESS-CCHHHHHHHH-----------HHTCCEEECCCT--
T ss_pred CcCCCcccCeEEEecCCCCccHHHHHHHHHHHCCCCCeEEEecC-cchhhhhhhh-----------eeCCceEeccCh--
Confidence 344455579999987 78886444444444434 335666544 4655544311 1248886 3332
Q ss_pred HHHHHHHHhcCCEEEEE
Q 015599 169 GLSLKEALKKGEEVVIK 185 (404)
Q Consensus 169 G~~L~~~l~~g~~V~v~ 185 (404)
...+.++.|..|.+.
T Consensus 109 --d~~~~i~~G~~v~vd 123 (141)
T 2hi6_A 109 --KFFEAVKTGDRVVVN 123 (141)
T ss_dssp --HHHHHCCTTSEEEEE
T ss_pred --hHHHHhcCCCEEEEe
Confidence 244677778777654
No 41
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=25.71 E-value=9 Score=27.28 Aligned_cols=23 Identities=26% Similarity=0.434 Sum_probs=17.4
Q ss_pred eEEeeEEEEcCee-eeccC-Ccccc
Q 015599 379 VTILPTLVINDVQ-YRGLL-FNEQL 401 (404)
Q Consensus 379 v~~~Ptl~IN~~~-yrG~l-~~~~v 401 (404)
|...||++|||+. ++|.. +.+.+
T Consensus 48 v~~~Pt~~~~G~~~~~G~~~~~~~l 72 (77)
T 1ilo_A 48 LTALPGLAVDGELKIMGRVASKEEI 72 (77)
T ss_dssp CSSSSCEEETTEEEECSSCCCHHHH
T ss_pred CCcCCEEEECCEEEEcCCCCCHHHH
Confidence 6689999999986 77876 55544
No 42
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=24.33 E-value=14 Score=35.16 Aligned_cols=25 Identities=36% Similarity=0.505 Sum_probs=21.5
Q ss_pred ceEEeeEEEEcCeeeeccCCccccc
Q 015599 378 DVTILPTLVINDVQYRGLLFNEQLV 402 (404)
Q Consensus 378 ~v~~~Ptl~IN~~~yrG~l~~~~v~ 402 (404)
+|.-+||+++||+.|.|..+.+++.
T Consensus 248 gI~~vPT~~i~G~~~~G~~~~~~L~ 272 (291)
T 3kp9_A 248 GITSYPTWIINGRTYTGVRSLEALA 272 (291)
T ss_dssp TCCSTTEEEETTEEEESCCCHHHHH
T ss_pred CCcccCeEEECCEEecCCCCHHHHH
Confidence 4778999999999999998877654
Done!