BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015609
(403 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54Z26|GLYC1_DICDI Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum
GN=shmt1 PE=1 SV=1
Length = 457
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 177/267 (66%), Positives = 209/267 (78%), Gaps = 2/267 (0%)
Query: 128 GNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGAR 187
GN L D EIF++M +EK RQFKG+ELIASENF RAVMEALGSH TNKY+EGYPG+R
Sbjct: 6 GNTPLKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSR 65
Query: 188 YYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGL 247
YY G + +D++E LC +RALKAF LD WGVNVQPYS + ANFAVYT LL P DRIMGL
Sbjct: 66 YYGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMGL 125
Query: 248 DSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC 307
D PSGGHL+HGY T KK+SA+SIFFES PY++ G IDY++LEE A+ ++PK++I
Sbjct: 126 DLPSGGHLTHGYQTD-KKKISASSIFFESMPYQIGAD-GLIDYQRLEENALLFKPKLIIS 183
Query: 308 GGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLR 367
G S+YPREWDY R R IADK GA LMCDMAH SGL+AA+ L SPFDYCD+VTSTTHK+LR
Sbjct: 184 GASAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHKTLR 243
Query: 368 GPRGGIIFFRRGKKPRKQGIPLNHGDV 394
GPR GIIFFRRGK+ G + D+
Sbjct: 244 GPRSGIIFFRRGKRVDGNGKEIEEYDI 270
>sp|Q54EW1|GLYC2_DICDI Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum
GN=shmt2 PE=3 SV=1
Length = 481
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 169/258 (65%), Positives = 211/258 (81%), Gaps = 2/258 (0%)
Query: 129 NQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARY 188
N+S+ +DPEI+D+M KEKQRQF G+ELIASENF RAVME++GS TNKY+EG PGARY
Sbjct: 31 NRSVSESDPEIYDLMMKEKQRQFTGLELIASENFTSRAVMESIGSCFTNKYAEGLPGARY 90
Query: 189 YTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLD 248
Y GN+ +DQ+ENLC +RAL+ F+L+ + WGVNVQPYS ++ANFA +TGLL P DRIMGLD
Sbjct: 91 YGGNEVVDQLENLCIKRALETFNLNPEEWGVNVQPYSGSTANFAAFTGLLKPHDRIMGLD 150
Query: 249 SPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308
PSGGHL+HGY T KK+SA SIFFES PY+VN +TGY+DY K+E A +RPK+LI G
Sbjct: 151 LPSGGHLTHGYQTD-KKKISATSIFFESMPYQVN-ETGYVDYNKMEANAALFRPKLLIAG 208
Query: 309 GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRG 368
S+YPREWDY R R+IADK GA L+CDMAHISG++A K+ SPF +CD+VT+TTHK+LRG
Sbjct: 209 ASAYPREWDYERMRKIADKHGAYLLCDMAHISGMVAGKQAISPFLFCDVVTTTTHKTLRG 268
Query: 369 PRGGIIFFRRGKKPRKQG 386
PR G+IFFR+ K+ +G
Sbjct: 269 PRAGLIFFRKTKRRDAKG 286
>sp|P49358|GLYN_FLAPR Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria
pringlei PE=2 SV=1
Length = 517
Score = 344 bits (882), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 168/277 (60%), Positives = 205/277 (74%), Gaps = 6/277 (2%)
Query: 114 EPGLESRRAGVRAWG---NQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEA 170
E E R GV W N L + DPEI DI+E EK RQ+KG+ELI SENF +VM+A
Sbjct: 36 EAVYEKERPGV-TWPKQLNAPLEVGDPEIADIIELEKARQWKGLELILSENFTSLSVMQA 94
Query: 171 LGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSAN 230
+GS +TNKYSEGYPGARYY GN+YID E LC +RAL+AF LD+ WGVNVQP S + AN
Sbjct: 95 VGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDAAKWGVNVQPLSGSPAN 154
Query: 231 FAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDY 290
F VYT LL DRIM LD P GGHLSHGY T KK+SA SIFFE+ PY++N TGYIDY
Sbjct: 155 FHVYTALLKAHDRIMALDLPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLNESTGYIDY 213
Query: 291 EKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELAS 350
++LE+ A +RPK+++ G S+Y R +DY R R++ DK A+L+ DMAHISGL+AA + S
Sbjct: 214 DQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHISGLVAAGVIPS 273
Query: 351 PFDYCDIVTSTTHKSLRGPRGGIIFFRRG-KKPRKQG 386
PFDY D+VT+TTHKSLRGPRG +IFFR+G K+ KQG
Sbjct: 274 PFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEVNKQG 310
>sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum
PE=1 SV=1
Length = 518
Score = 343 bits (879), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/259 (62%), Positives = 199/259 (76%), Gaps = 2/259 (0%)
Query: 129 NQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARY 188
N L + DPEI DI+E EK RQ+KG+ELI SENF +VM+A+GS +TNKYSEGYPGARY
Sbjct: 53 NSPLEVIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARY 112
Query: 189 YTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLD 248
Y GN+YID E LC +RAL+AF LD WGVNVQP S + +NF VYT LL P DRIM LD
Sbjct: 113 YGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIMALD 172
Query: 249 SPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308
P GGHLSHGY T KK+SA SIFFE+ PY+++ TGYIDY++LE+ A +RPK+++ G
Sbjct: 173 LPHGGHLSHGYQT-DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAG 231
Query: 309 GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRG 368
S+Y R +DY R R++ DK AVL+ DMAHISGL+AA + SPFDY D+VT+TTHKSLRG
Sbjct: 232 ASAYARLYDYARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 291
Query: 369 PRGGIIFFRRG-KKPRKQG 386
PRG +IFFR+G K+ KQG
Sbjct: 292 PRGAMIFFRKGLKEVNKQG 310
>sp|P49357|GLYM_FLAPR Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria
pringlei PE=2 SV=1
Length = 517
Score = 342 bits (877), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 167/277 (60%), Positives = 204/277 (73%), Gaps = 6/277 (2%)
Query: 114 EPGLESRRAGVRAWG---NQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEA 170
E E R GV W N L + DPEI DI+E EK RQ+KG+ELI SENF +VM+A
Sbjct: 36 EAVYEKERPGV-TWPKQLNAPLEVVDPEIADIIELEKARQWKGLELIPSENFTSLSVMQA 94
Query: 171 LGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSAN 230
+GS +TNKYSEGYPGARYY GN+YID E LC +RAL+AF LD WGVNVQP S + AN
Sbjct: 95 VGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPAN 154
Query: 231 FAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDY 290
F VYT LL DRIM LD P GGHLSHGY T KK+SA SIFFE+ PY++N TGYIDY
Sbjct: 155 FHVYTALLKAHDRIMALDLPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLNESTGYIDY 213
Query: 291 EKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELAS 350
++LE+ A +RPK+++ G S+Y R +DY R R++ DK A+++ DMAHISGL+AA + S
Sbjct: 214 DQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAIMLADMAHISGLVAAGVIPS 273
Query: 351 PFDYCDIVTSTTHKSLRGPRGGIIFFRRG-KKPRKQG 386
PFDY D+VT+TTHKSLRGPRG +IFFR+G K+ KQG
Sbjct: 274 PFDYADVVTTTTHKSLRGPRGAMIFFRKGLKEVNKQG 310
>sp|Q9SZJ5|GLYM_ARATH Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis
thaliana GN=SHM1 PE=1 SV=1
Length = 517
Score = 340 bits (872), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 159/259 (61%), Positives = 199/259 (76%), Gaps = 2/259 (0%)
Query: 129 NQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARY 188
N L DPEI DI+E EK RQ+KG+ELI SENF +VM+A+GS +TNKYSEGYPGARY
Sbjct: 52 NAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 111
Query: 189 YTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLD 248
Y GN+YID E LC +RAL+AF LD + WGVNVQP S + ANF VYT LL P +RIM LD
Sbjct: 112 YGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALD 171
Query: 249 SPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308
P GGHLSHGY T KK+SA SIFFE+ PY+++ TGYIDY+++E+ A +RPK+++ G
Sbjct: 172 LPHGGHLSHGYQT-DTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAG 230
Query: 309 GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRG 368
S+Y R +DY R R++ +K AV++ DMAHISGL+AA + SPFDY D+VT+TTHKSLRG
Sbjct: 231 ASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRG 290
Query: 369 PRGGIIFFRRG-KKPRKQG 386
PRG +IFFR+G K+ KQG
Sbjct: 291 PRGAMIFFRKGVKEINKQG 309
>sp|P50433|GLYM_SOLTU Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum
PE=2 SV=1
Length = 518
Score = 340 bits (871), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 166/287 (57%), Positives = 210/287 (73%), Gaps = 6/287 (2%)
Query: 104 SLPFTKRFAVEPGLESRRAGVRAWG---NQSLPLADPEIFDIMEKEKQRQFKGIELIASE 160
SL + E + ++GV AW N L + DPEI DI+E EK RQ+KG+ELI SE
Sbjct: 26 SLYYMSSLPNEAVYDKEKSGV-AWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSE 84
Query: 161 NFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVN 220
NF +VM+A+GS +TNKYSEGYPGARYY GN+YID E LC +RAL+AF LD WGVN
Sbjct: 85 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVN 144
Query: 221 VQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280
VQP S + ANF VYT LL P +RIM LD P GGHLSHGY T KK+SA SIFFE+ PY+
Sbjct: 145 VQPLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQT-DTKKISAVSIFFETMPYR 203
Query: 281 VNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHIS 340
++ TGYIDY++LE+ A +RPK+++ G S+Y R +DY R R++ +K A+L+ DMAHIS
Sbjct: 204 LDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVCNKQKAILLADMAHIS 263
Query: 341 GLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIFFRRG-KKPRKQG 386
GL+AA + SPFDY D+VT+TTHKSLRGPRG +IF+R+G K+ KQG
Sbjct: 264 GLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQG 310
>sp|P50432|GLYC_CAEEL Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32
PE=1 SV=2
Length = 507
Score = 338 bits (866), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 193/244 (79%), Gaps = 1/244 (0%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
DPE+FDIM+ EK+RQ +G+ELIASENF +AVM+ALGS + NKYSEGYPGARYY GN++I
Sbjct: 56 DPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNEFI 115
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
DQ+E LC +RAL+ F LD WGVNVQP S + ANFAVYT ++ RIMGLD P GGHL
Sbjct: 116 DQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMGLDLPDGGHL 175
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
+HG+ TP +KVSA S FF+S PYKV+P TG IDY+KLE+ AM +RPK +I G S Y R
Sbjct: 176 THGFFTP-ARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCYARH 234
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
DY RFR+IA K GA LM DMAHISGL+AA + SPF+Y D+VT+TTHKSLRGPRG +IF
Sbjct: 235 LDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGALIF 294
Query: 376 FRRG 379
+R+G
Sbjct: 295 YRKG 298
>sp|Q60V73|GLYC_CAEBR Serine hydroxymethyltransferase OS=Caenorhabditis briggsae
GN=mel-32 PE=3 SV=3
Length = 511
Score = 336 bits (862), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 192/244 (78%), Gaps = 1/244 (0%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
DPE+F+IM+ EK RQ +G+ELIASENF +AVM+ALGS + NKYSEGYPGARYY GN++I
Sbjct: 60 DPEVFNIMKNEKSRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNEFI 119
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
DQ+E LC +RAL+ F LD WGVNVQ S + ANFAVYT L+ RIMGLD P GGHL
Sbjct: 120 DQMEILCQKRALEVFGLDPAKWGVNVQSLSGSPANFAVYTALVGANGRIMGLDLPDGGHL 179
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
+HG+ TP +KVSA S FF+S PYKV+ Q+G IDY+KLEE AM +RPK+LI G S Y R
Sbjct: 180 THGFFTP-ARKVSATSEFFQSMPYKVDAQSGLIDYDKLEENAMLFRPKVLIAGVSCYARH 238
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
DY RFR+IA K GA LM DMAHISGL+AA + SPF+Y D+VT+TTHKSLRGPRG +IF
Sbjct: 239 LDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGAMIF 298
Query: 376 FRRG 379
+R+G
Sbjct: 299 YRKG 302
>sp|P14519|GLYM_RABIT Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus
cuniculus GN=SHMT2 PE=1 SV=2
Length = 504
Score = 327 bits (837), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/258 (60%), Positives = 195/258 (75%), Gaps = 2/258 (0%)
Query: 125 RAW-GNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGY 183
R W G +SL DPE+++++++EK RQ +G+ELIASENF RA +EALGS L NKYSEGY
Sbjct: 41 RGWTGQESLSDTDPEMWELLQREKDRQCRGLELIASENFCIRAALEALGSCLNNKYSEGY 100
Query: 184 PGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDR 243
PG RYY G + +D+IE LC RAL+AFDLD WGVNVQPYS + AN A YT LL P DR
Sbjct: 101 PGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDR 160
Query: 244 IMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPK 303
IMGLD P GGHL+HGY + K+VSA SIFFES PYK+NPQTG IDYE+L A +RP+
Sbjct: 161 IMGLDLPDGGHLTHGYMS-DVKRVSATSIFFESMPYKLNPQTGLIDYEQLALTARLFRPR 219
Query: 304 ILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTH 363
++I G S+Y R DY R R++ D+ A L+ DMAHISGL+AAK + SPF + D+VT+TTH
Sbjct: 220 LIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADVVTTTTH 279
Query: 364 KSLRGPRGGIIFFRRGKK 381
K+LRG R G+IF+R+G +
Sbjct: 280 KTLRGARSGLIFYRKGVR 297
>sp|P34897|GLYM_HUMAN Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens
GN=SHMT2 PE=1 SV=3
Length = 504
Score = 326 bits (835), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/258 (60%), Positives = 196/258 (75%), Gaps = 2/258 (0%)
Query: 125 RAW-GNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGY 183
R W G +SL +DPE+++++++EK RQ +G+ELIASENF RA +EALGS L NKYSEGY
Sbjct: 41 RGWTGQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGY 100
Query: 184 PGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDR 243
PG RYY G + +D+IE LC RAL+AFDLD WGVNVQPYS + AN AVYT LL P DR
Sbjct: 101 PGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDR 160
Query: 244 IMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPK 303
IMGLD P GGHL+HGY + K++SA SIFFES PYK+NP+TG IDY +L A +RP+
Sbjct: 161 IMGLDLPDGGHLTHGYMS-DVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPR 219
Query: 304 ILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTH 363
++I G S+Y R DY R R++ D+ A L+ DMAHISGL+AAK + SPF + DIVT+TTH
Sbjct: 220 LIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTH 279
Query: 364 KSLRGPRGGIIFFRRGKK 381
K+LRG R G+IF+R+G K
Sbjct: 280 KTLRGARSGLIFYRKGVK 297
>sp|Q10104|GLYM_SCHPO Serine hydroxymethyltransferase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=shm2 PE=3 SV=2
Length = 488
Score = 324 bits (831), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 152/260 (58%), Positives = 193/260 (74%), Gaps = 4/260 (1%)
Query: 133 PLA--DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYT 190
PLA DP ++ I+E EK RQ + I LIASENF RAVM+ALGS + NKYSEGYPGARYY
Sbjct: 33 PLAECDPTVYKILESEKSRQKESIALIASENFTSRAVMDALGSIMQNKYSEGYPGARYYG 92
Query: 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSP 250
GN++IDQ E LC RAL+AF LD + WGVNVQP+S + AN Y ++ P DR+MGLD P
Sbjct: 93 GNEFIDQAERLCQTRALEAFHLDGEKWGVNVQPHSGSPANLQAYQAVMKPHDRLMGLDLP 152
Query: 251 SGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310
GGHLSHG+ TP K +SA S +F + PY VN +TG IDY+ LE+ A+ +RPK+++ G S
Sbjct: 153 HGGHLSHGFSTP-QKAISAVSTYFSTMPYNVNKETGIIDYDSLEKAAIQFRPKVIVAGAS 211
Query: 311 SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPR 370
+Y R DY R R+I + C A L+CDMAHISGL+AA + SPF+Y DIVT+TTHKSLRGPR
Sbjct: 212 AYARLVDYKRMRKITEMCNAYLLCDMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPR 271
Query: 371 GGIIFFRRGKKPR-KQGIPL 389
G +IF+R+G + K+G P+
Sbjct: 272 GAMIFYRKGTRSHDKRGNPI 291
>sp|Q3SZ20|GLYM_BOVIN Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus
GN=SHMT2 PE=2 SV=1
Length = 504
Score = 321 bits (823), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 152/256 (59%), Positives = 194/256 (75%), Gaps = 2/256 (0%)
Query: 125 RAW-GNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGY 183
+ W G +SL +DPE+++++ +EK RQ +G+ELIASENF RA +EALGS L NKYSEGY
Sbjct: 41 KGWSGQESLSDSDPEMWELLRREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGY 100
Query: 184 PGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDR 243
PG RYY G + +D+IE LC RAL+AFDLD WGVNVQPYS + AN A YT LL P DR
Sbjct: 101 PGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDR 160
Query: 244 IMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPK 303
IMGLD P GGHL+HGY + K++SA SIFFES PYK+NPQTG IDY++L A ++P+
Sbjct: 161 IMGLDLPDGGHLTHGYMS-DVKRISATSIFFESMPYKLNPQTGLIDYDQLALTARLFKPR 219
Query: 304 ILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTH 363
++I G S+Y R DY R R++ D+ A L+ DMAHISGL+AAK + SPF + DIVT+TTH
Sbjct: 220 LIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTH 279
Query: 364 KSLRGPRGGIIFFRRG 379
K+LRG R G+IF+R+G
Sbjct: 280 KTLRGARSGLIFYRKG 295
>sp|Q6FUP6|GLYC_CANGA Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SHM2 PE=3 SV=1
Length = 469
Score = 320 bits (821), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/254 (61%), Positives = 189/254 (74%), Gaps = 1/254 (0%)
Query: 132 LPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTG 191
L DPE+ I++ E RQ I+LIASENF +V +ALG+ L NKYSEGYPGARYY G
Sbjct: 17 LSETDPEVEQIIKDEVDRQKHSIDLIASENFTTTSVFDALGTPLCNKYSEGYPGARYYGG 76
Query: 192 NQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPS 251
N++ID+IE LC +RAL+AF + D WGVNVQ S + AN VY L+ P +R+MGL P
Sbjct: 77 NEHIDRIERLCQQRALEAFHVTPDRWGVNVQTLSGSPANLQVYQALMKPHERLMGLYLPD 136
Query: 252 GGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS 311
GGHLSHGY T +K+SA S +FESFPY+VNP+TG IDY+ LE+ A+ YRPKIL+ G S+
Sbjct: 137 GGHLSHGYATEN-RKISAVSTYFESFPYRVNPETGIIDYDTLEKNAILYRPKILVAGTSA 195
Query: 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG 371
Y R DY R R+IADKCGA LM DMAHISGL+AA + SPF+Y DIVT+TTHKSLRGPRG
Sbjct: 196 YCRLIDYKRMREIADKCGAYLMVDMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRG 255
Query: 372 GIIFFRRGKKPRKQ 385
+IFFRRG + Q
Sbjct: 256 AMIFFRRGIRSVNQ 269
>sp|Q5E9P9|GLYC_BOVIN Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1
PE=2 SV=3
Length = 484
Score = 320 bits (821), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 152/252 (60%), Positives = 192/252 (76%), Gaps = 1/252 (0%)
Query: 130 QSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYY 189
Q L D E+++I++KE RQ G+ELIASENF RAV+EALGS L NKYSEGYPG RYY
Sbjct: 24 QPLKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYY 83
Query: 190 TGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDS 249
G ++ID++E LC +RAL+ + LDS WGVNVQPYS + ANFAVYT L+ P RIMGLD
Sbjct: 84 GGTEFIDELEVLCQKRALQVYGLDSQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDL 143
Query: 250 PSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309
P GGHL+HG+ T KK+SA SIFFES PYKVNP TGYI+Y++LEE A + P+++I G
Sbjct: 144 PDGGHLTHGFMTD-KKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPRLIIAGT 202
Query: 310 SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP 369
S Y R DY R R+IAD GA LM DMAH+SGL+AA + SPF++C +V++TTHK+LRG
Sbjct: 203 SCYSRNLDYARLRKIADDNGAYLMADMAHVSGLVAAGVVPSPFEHCHVVSTTTHKTLRGC 262
Query: 370 RGGIIFFRRGKK 381
R G+IF+R+G +
Sbjct: 263 RAGMIFYRKGVR 274
>sp|O13972|GLYD_SCHPO Probable serine hydroxymethyltransferase, cytosolic
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC24C9.12c PE=3 SV=1
Length = 467
Score = 320 bits (820), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/255 (61%), Positives = 188/255 (73%), Gaps = 2/255 (0%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
DP + +IM E RQ + LIASENF RAVM+ALGS ++NKYSEGYPGARYY GN++I
Sbjct: 16 DPTVAEIMRHEADRQRSSVVLIASENFTSRAVMDALGSVMSNKYSEGYPGARYYGGNKFI 75
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
DQIE LC ERAL AF+LD WGVNVQ S + AN VY ++ P R+MGLD PSGGHL
Sbjct: 76 DQIETLCQERALAAFNLDPAKWGVNVQCLSGSPANMQVYQAIMPPHGRLMGLDLPSGGHL 135
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
SHGY T KK+SA S +FES PY+V+P TG IDY+ LE A +RPKIL+ G S+Y R
Sbjct: 136 SHGYQT-DTKKISAVSTYFESMPYRVDPNTGLIDYDMLEHDAQLFRPKILVAGTSAYCRL 194
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
DY R RQIAD A L+ DMAHISGL++A + SPF+Y D+VT+TTHKSLRGPRG +IF
Sbjct: 195 IDYARMRQIADSVNAYLVVDMAHISGLVSAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 254
Query: 376 FRRG-KKPRKQGIPL 389
FRRG +K K+G P+
Sbjct: 255 FRRGLRKHDKKGNPI 269
>sp|P35623|GLYC_SHEEP Serine hydroxymethyltransferase, cytosolic OS=Ovis aries GN=SHMT1
PE=1 SV=3
Length = 484
Score = 319 bits (818), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/252 (60%), Positives = 192/252 (76%), Gaps = 1/252 (0%)
Query: 130 QSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYY 189
Q L D E+++I++KE RQ G+ELIASENF RAV+EALGS L NKYSEGYPG RYY
Sbjct: 24 QPLKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYY 83
Query: 190 TGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDS 249
G ++ID++E LC +RAL+ + LD + WGVNVQPYS + ANFAVYT L+ P RIMGLD
Sbjct: 84 GGTEFIDELEVLCQKRALQVYGLDPECWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDL 143
Query: 250 PSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309
P GGHL+HG+ T KK+SA SIFFES PYKVNP TGYI+Y++LEE A + P+++I G
Sbjct: 144 PDGGHLTHGFMTD-KKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPRLIIAGT 202
Query: 310 SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP 369
S Y R DY R R+IAD GA LM DMAHISGL+AA + SPF++C +V++TTHK+LRG
Sbjct: 203 SCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHCHVVSTTTHKTLRGC 262
Query: 370 RGGIIFFRRGKK 381
R G+IF+R+G +
Sbjct: 263 RAGMIFYRKGVR 274
>sp|P37291|GLYC_YEAST Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SHM2 PE=1
SV=2
Length = 469
Score = 319 bits (818), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/246 (61%), Positives = 189/246 (76%), Gaps = 1/246 (0%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
DPE+ I++ E +RQ I+LIASENF +V +ALG+ L+NKYSEGYPGARYY GN++I
Sbjct: 21 DPEVDSIIKDEIERQKHSIDLIASENFTSTSVFDALGTPLSNKYSEGYPGARYYGGNEHI 80
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
D++E LC +RALKAF + D WGVNVQ S + AN VY ++ P +R+MGL P GGHL
Sbjct: 81 DRMEILCQQRALKAFHVTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLYLPDGGHL 140
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
SHGY T +K+SA S +FESFPY+VNP+TG IDY+ LE+ A+ YRPK+L+ G S+Y R
Sbjct: 141 SHGYATEN-RKISAVSTYFESFPYRVNPETGIIDYDTLEKNAILYRPKVLVAGTSAYCRL 199
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
DY R R+IADKCGA LM DMAHISGLIAA + SPF+Y DIVT+TTHKSLRGPRG +IF
Sbjct: 200 IDYKRMREIADKCGAYLMVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIF 259
Query: 376 FRRGKK 381
FRRG +
Sbjct: 260 FRRGVR 265
>sp|Q75BQ6|GLYC_ASHGO Serine hydroxymethyltransferase, cytosolic OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=SHM2 PE=3 SV=2
Length = 469
Score = 311 bits (796), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 151/250 (60%), Positives = 185/250 (74%), Gaps = 1/250 (0%)
Query: 132 LPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTG 191
L +DPE+ I++ E RQ I LIASEN AV +ALG+ + NKYSEGYPGARYY G
Sbjct: 17 LSESDPEVDAIIKDEIDRQKHSIVLIASENLTSTAVFDALGTPMCNKYSEGYPGARYYGG 76
Query: 192 NQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPS 251
NQ+ID++E LC RAL+AF + D WGVNVQ S + AN VY L+ P +R+MGL P
Sbjct: 77 NQHIDRMELLCQRRALEAFHVTPDRWGVNVQSLSGSPANLQVYQALMKPHERLMGLHLPD 136
Query: 252 GGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS 311
GGHLSHGY T +K+SA S +FESFPY+V+P+TG IDY+ LE+ A+ YRPKIL+ G S+
Sbjct: 137 GGHLSHGYQTET-RKISAVSTYFESFPYRVDPETGIIDYDTLEKNAVLYRPKILVAGTSA 195
Query: 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG 371
Y R DY R R+IADK GA LM DMAHISGL+AA + SPF+Y DIVT+TTHKSLRGPRG
Sbjct: 196 YCRLIDYKRMREIADKVGAYLMVDMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRG 255
Query: 372 GIIFFRRGKK 381
+IFFRRG +
Sbjct: 256 AMIFFRRGVR 265
>sp|Q6CLQ5|GLYM_KLULA Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=SHM1 PE=3 SV=1
Length = 498
Score = 311 bits (796), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 143/252 (56%), Positives = 185/252 (73%), Gaps = 1/252 (0%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
DPE++DI+ KE++RQ I LI SENF ++VM+ LGS + NKYSEGYPG RYY GNQ+I
Sbjct: 45 DPEMYDILTKERKRQKHSITLIPSENFTSKSVMDLLGSEMQNKYSEGYPGERYYGGNQFI 104
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
D E+LC +RAL+ ++LD WGVNVQP S AN Y+ ++ DR+MGLD P GGHL
Sbjct: 105 DMAESLCQKRALELYNLDPQLWGVNVQPLSGAPANLYAYSAVMETNDRLMGLDLPHGGHL 164
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
SHGY P G K+S S +F++ PY V+ QTG IDY+ L + + +RPK+++ G S+Y R
Sbjct: 165 SHGYQLPSGTKISYISKYFQTMPYHVDSQTGIIDYDFLSKTSKLFRPKVIVAGASAYSRV 224
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
DY RF++IAD CGA LM DMAHISGL+AA SPF+Y DIVT+TTHKSLRGPRG +IF
Sbjct: 225 LDYKRFKEIADACGAYLMSDMAHISGLVAAGVTRSPFEYSDIVTTTTHKSLRGPRGAMIF 284
Query: 376 FRRG-KKPRKQG 386
+R+G +K K+G
Sbjct: 285 YRKGVRKVTKKG 296
>sp|P07511|GLYC_RABIT Serine hydroxymethyltransferase, cytosolic OS=Oryctolagus cuniculus
GN=SHMT1 PE=1 SV=2
Length = 484
Score = 310 bits (794), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/252 (62%), Positives = 193/252 (76%), Gaps = 1/252 (0%)
Query: 130 QSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYY 189
Q L +D E++DI++KE RQ G+ELIASENF RAV+EALGS L NKYSEGYPG RYY
Sbjct: 24 QPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYY 83
Query: 190 TGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDS 249
G ++ID++E LC +RAL+A+ LD WGVNVQPYS + ANFAVYT L+ P RIMGLD
Sbjct: 84 GGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDL 143
Query: 250 PSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309
P GGHL+HG+ T KK+SA SIFFES YKVNP TGYIDY++LEE A + PK++I G
Sbjct: 144 PDGGHLTHGFMTD-KKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAGT 202
Query: 310 SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP 369
S Y R DYGR R+IAD+ GA LM DMAHISGL+ A + SPF++C +VT+TTHK+LRG
Sbjct: 203 SCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGC 262
Query: 370 RGGIIFFRRGKK 381
R G+IF+RRG +
Sbjct: 263 RAGMIFYRRGVR 274
>sp|O13426|GLYC_CANAL Serine hydroxymethyltransferase, cytosolic OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=SHM2 PE=1 SV=4
Length = 470
Score = 310 bits (793), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/244 (61%), Positives = 183/244 (75%), Gaps = 1/244 (0%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
DPE+ I++ E RQ I LIASENF AV +ALG+ + NKYSEGYPGARYY GN++I
Sbjct: 22 DPEVDQIIKDEIDRQQHSIVLIASENFTTTAVFDALGTPMCNKYSEGYPGARYYGGNEHI 81
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
D++E LC ERALKAF L D WGVNVQ S + AN VY ++ P +R+MGLD P GGHL
Sbjct: 82 DRMELLCQERALKAFGLTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLDLPHGGHL 141
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
SHGY T +K+SA S +FE+ PY+V+ +TG IDY+ LE+ A+ YRPK+L+ G S+Y R
Sbjct: 142 SHGYQT-DSRKISAVSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAGTSAYCRL 200
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
DY R R+IADK GA L+ DMAHISGLIAA + SPF+Y DIVT+TTHKSLRGPRG +IF
Sbjct: 201 IDYKRMREIADKVGAYLVVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIF 260
Query: 376 FRRG 379
FRRG
Sbjct: 261 FRRG 264
>sp|P34898|GLYC_NEUCR Serine hydroxymethyltransferase, cytosolic OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=for PE=3 SV=2
Length = 480
Score = 309 bits (791), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/257 (58%), Positives = 188/257 (73%), Gaps = 1/257 (0%)
Query: 125 RAWGNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYP 184
+A SL +DP++ +IM+KE QRQ + I LIASEN RAV +ALGS ++NKYSEG P
Sbjct: 11 KAMLEHSLVESDPQVAEIMKKEVQRQRESIILIASENVTSRAVFDALGSPMSNKYSEGLP 70
Query: 185 GARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRI 244
GARYY GNQ+ID+IE LC RAL+AF LD WGVNVQ S + AN VY ++ R+
Sbjct: 71 GARYYGGNQHIDEIEVLCQNRALEAFHLDPKQWGVNVQCLSGSPANLQVYQAIMPVHGRL 130
Query: 245 MGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKI 304
MGLD P GGHLSHGY TP +K+SA S +FE+ PY+VN TG IDY+ LE+ A +RPK+
Sbjct: 131 MGLDLPHGGHLSHGYQTP-QRKISAVSTYFETMPYRVNIDTGLIDYDTLEKNAQLFRPKV 189
Query: 305 LICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHK 364
L+ G S+Y R DY R R+IAD GA L+ DMAHISGLIA++ + SPF Y D+VT+TTHK
Sbjct: 190 LVAGTSAYCRLIDYERMRKIADSVGAYLVVDMAHISGLIASEVIPSPFLYADVVTTTTHK 249
Query: 365 SLRGPRGGIIFFRRGKK 381
SLRGPRG +IFFRRG +
Sbjct: 250 SLRGPRGAMIFFRRGVR 266
>sp|P34896|GLYC_HUMAN Serine hydroxymethyltransferase, cytosolic OS=Homo sapiens GN=SHMT1
PE=1 SV=1
Length = 483
Score = 307 bits (787), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 155/252 (61%), Positives = 194/252 (76%), Gaps = 1/252 (0%)
Query: 130 QSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYY 189
Q L +D E+++I++KE RQ G+ELIASENF RAV+EALGS L NKYSEGYPG RYY
Sbjct: 24 QPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYY 83
Query: 190 TGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDS 249
G ++ID++E LC +RAL+A+ LD WGVNVQPYS + ANFAVYT L+ P RIMGLD
Sbjct: 84 GGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDL 143
Query: 250 PSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309
P GGHL+HG+ T KK+SA SIFFES PYKVNP TGYI+Y++LEE A + PK++I G
Sbjct: 144 PDGGHLTHGFMTD-KKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGT 202
Query: 310 SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP 369
S Y R +Y R R+IAD+ GA LM DMAHISGL+AA + SPF++C +VT+TTHK+LRG
Sbjct: 203 SCYSRNLEYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGC 262
Query: 370 RGGIIFFRRGKK 381
R G+IF+R+G K
Sbjct: 263 RAGMIFYRKGVK 274
>sp|Q5RFK5|GLYC_PONAB Serine hydroxymethyltransferase, cytosolic OS=Pongo abelii GN=SHMT1
PE=2 SV=1
Length = 483
Score = 307 bits (786), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/250 (61%), Positives = 193/250 (77%), Gaps = 1/250 (0%)
Query: 130 QSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYY 189
Q L +D E+++I++KE RQ G+EL ASENF +AV+EALGS L NKYSEGYPG RYY
Sbjct: 24 QPLKDSDVEVYNIIKKESNRQRVGLELFASENFASQAVLEALGSCLNNKYSEGYPGQRYY 83
Query: 190 TGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDS 249
G ++ID++E LC +RAL+A+ LD WGVNVQPYS + ANFAVYT L+ P RIMGLD
Sbjct: 84 GGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDL 143
Query: 250 PSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309
P GGHL+HG+ T G KK+SA SIFFES PYKVNP TGYI+Y++LEE A + PK++I G
Sbjct: 144 PDGGHLTHGFMT-GKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGT 202
Query: 310 SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP 369
S Y R DY R R+IAD+ GA LM DMAHISGL+AA + SPF++C +VT+TTHK+LRG
Sbjct: 203 SCYSRNLDYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGC 262
Query: 370 RGGIIFFRRG 379
R G+IF+R+G
Sbjct: 263 RAGMIFYRKG 272
>sp|Q758F0|GLYM_ASHGO Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=SHM1 PE=3 SV=1
Length = 497
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 145/272 (53%), Positives = 189/272 (69%), Gaps = 1/272 (0%)
Query: 119 SRRAGVRAWGNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNK 178
+R A + +Q + DPE++DI+ KE+ RQ + I LI SENF AVM LGS + NK
Sbjct: 27 ARSANGQLMLSQHVQEFDPEMYDILTKERSRQKRSITLIPSENFTSVAVMNLLGSEMQNK 86
Query: 179 YSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL 238
YSEGYPG RYY GNQYID E+LC +RAL+ + LD WGVNVQ S AN Y+ ++
Sbjct: 87 YSEGYPGQRYYGGNQYIDMAESLCQKRALELYGLDPAKWGVNVQSLSGAPANLYAYSAIM 146
Query: 239 LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAM 298
GDR+MGLD P GGHLSHGY G K+S S +F++ Y+V+P TG +DY+ L E +
Sbjct: 147 EVGDRMMGLDLPHGGHLSHGYQLQNGNKISYISKYFQTMAYRVDPATGLVDYDTLSETSK 206
Query: 299 DYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIV 358
+RPK+++ G S+Y R DY RFR+IAD CGA L+ DMAH+SGL+AA SPF+Y DIV
Sbjct: 207 LFRPKVIVAGTSAYARVLDYKRFREIADACGAYLLSDMAHVSGLVAAGVHPSPFEYSDIV 266
Query: 359 TSTTHKSLRGPRGGIIFFRRG-KKPRKQGIPL 389
T+TTHKSLRGPRG +IF+R+G +K K+G +
Sbjct: 267 TTTTHKSLRGPRGAMIFYRKGIRKVTKKGTEI 298
>sp|Q6FQ44|GLYM_CANGA Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SHM1 PE=3 SV=1
Length = 485
Score = 305 bits (782), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 139/247 (56%), Positives = 177/247 (71%)
Query: 135 ADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQY 194
DPE+F I+ E+ RQ + LI SENF +AVM+ LGS + NKYSEGYPG RYY GNQ+
Sbjct: 30 VDPEMFRILSDERSRQKHSVTLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGGNQF 89
Query: 195 IDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGH 254
ID+ E+LC RAL + LD + WGVNVQ S AN Y+ ++ GDR+MGLD P GGH
Sbjct: 90 IDKAESLCQARALDLYGLDPEKWGVNVQALSGAPANLYAYSAVMEVGDRLMGLDLPHGGH 149
Query: 255 LSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPR 314
LSHGY P G K+S S +F + PY VN +TG IDY+ L + +RPK+++ G S+Y R
Sbjct: 150 LSHGYQLPSGTKISYISKYFNTMPYHVNTETGIIDYDTLAMTSKLFRPKVIVAGTSAYSR 209
Query: 315 EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGII 374
+ DY RFR+IAD CGA L+ DMAHISGL+AA + SPF++ DIVT+TTHKSLRGPRG +I
Sbjct: 210 KLDYARFRKIADGCGAYLLSDMAHISGLVAANVIDSPFEHSDIVTTTTHKSLRGPRGAMI 269
Query: 375 FFRRGKK 381
F+R+G K
Sbjct: 270 FYRKGIK 276
>sp|P50431|GLYC_MOUSE Serine hydroxymethyltransferase, cytosolic OS=Mus musculus GN=Shmt1
PE=1 SV=3
Length = 478
Score = 304 bits (779), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 154/253 (60%), Positives = 193/253 (76%), Gaps = 1/253 (0%)
Query: 129 NQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARY 188
+Q L +D E++ I++KE RQ G+ELIASENF RAV+EALGS L NKYSEGYPG RY
Sbjct: 17 SQPLKDSDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRY 76
Query: 189 YTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLD 248
Y G ++ID++E LC +RAL+A+ LD WGVNVQPYS + ANFAVYT L+ P RIMGLD
Sbjct: 77 YGGTEFIDELEMLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLD 136
Query: 249 SPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308
P GGHL+HG+ T KK+SA SIFFES PYKV P+TGYI+Y++LEE A + PK++I G
Sbjct: 137 LPDGGHLTHGFMTD-KKKISATSIFFESMPYKVYPETGYINYDQLEENASLFHPKLIIAG 195
Query: 309 GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRG 368
S Y R DY R R+IAD GA LM DMAHISGL+AA + SPF++C +VT+TTHK+LRG
Sbjct: 196 TSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRG 255
Query: 369 PRGGIIFFRRGKK 381
R G+IF+R+G +
Sbjct: 256 CRAGMIFYRKGVR 268
>sp|P37292|GLYM_YEAST Serine hydroxymethyltransferase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SHM1 PE=1
SV=2
Length = 490
Score = 304 bits (778), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 147/266 (55%), Positives = 188/266 (70%), Gaps = 5/266 (1%)
Query: 121 RAGVRAWGNQSL---PLA--DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHL 175
R G+ G QSL P++ DPE+FDI+++E+ RQ I LI SENF +AVM+ LGS L
Sbjct: 17 RRGLLTSGAQSLVSKPVSEGDPEMFDILQQERHRQKHSITLIPSENFTSKAVMDLLGSEL 76
Query: 176 TNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYT 235
NKYSEGYPG RYY GN+ ID+ E+LC RAL+ + LD WGVNVQP S AN VY+
Sbjct: 77 QNKYSEGYPGERYYGGNEIIDKSESLCQARALELYGLDPAKWGVNVQPLSGAPANLYVYS 136
Query: 236 GLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEE 295
++ G+R+MGLD P GGHLSHGY G +S S +F+S PY V+ TG IDY+ L+
Sbjct: 137 AIMNVGERLMGLDLPDGGHLSHGYQLKSGTPISFISKYFQSMPYHVDHTTGLIDYDNLQV 196
Query: 296 KAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYC 355
A +RPK+++ G S+Y R DY RF++I+ CGA LM DMAHISGL+AA + SPF++
Sbjct: 197 LAKAFRPKVIVAGTSAYSRLIDYARFKEISQGCGAYLMSDMAHISGLVAANVVPSPFEHS 256
Query: 356 DIVTSTTHKSLRGPRGGIIFFRRGKK 381
DIVT+TTHKSLRGPRG +IFFR+G K
Sbjct: 257 DIVTTTTHKSLRGPRGAMIFFRKGIK 282
>sp|O13425|GLYM_CANAX Serine hydroxymethyltransferase, mitochondrial OS=Candida albicans
GN=SHM1 PE=3 SV=1
Length = 493
Score = 303 bits (776), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/289 (52%), Positives = 196/289 (67%), Gaps = 12/289 (4%)
Query: 95 CLKRQRDCQS--LP-FTKR-FAVEPGLESRRAGVRAWGNQSLPLADPEIFDIMEKEKQRQ 150
L+R QS LP F +R +AV P +A ++S+ DPE+ DI+ +E+ RQ
Sbjct: 5 TLRRSVRAQSKNLPAFARRTYAVSPS-------AQALISKSVQDVDPEMADILNQERTRQ 57
Query: 151 FKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF 210
I LI SENF +AVM+ LGS + NKYSEGYPG RYY GN+ ID+ E LC +RAL+AF
Sbjct: 58 KNSITLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGGNEIIDKAEALCQKRALEAF 117
Query: 211 DLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270
LD WGVNVQP S AN Y+ +L GDRIMGLD P GGHLSHGY T K+S
Sbjct: 118 GLDPSQWGVNVQPLSGAPANLYAYSAILEVGDRIMGLDLPHGGHLSHGYQTK-TTKISYI 176
Query: 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGA 330
S +F++ PY++N +TG IDY+ LE+ A +RPK+++ G S+Y R DY R RQ++ + GA
Sbjct: 177 SKYFQTMPYRLNEETGIIDYDTLEKNAQLFRPKVIVAGASAYSRVIDYKRMRQLSIRLGA 236
Query: 331 VLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIFFRRG 379
L+ DMAHISGL++A SPF Y DIVT+TTHKSLRGPRG +IFFR+G
Sbjct: 237 YLLSDMAHISGLVSAVVTDSPFPYSDIVTTTTHKSLRGPRGAMIFFRKG 285
>sp|Q7S5N8|GLYM_NEUCR Putative serine hydroxymethyltransferase, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU05805 PE=3 SV=1
Length = 527
Score = 295 bits (755), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 141/234 (60%), Positives = 173/234 (73%), Gaps = 2/234 (0%)
Query: 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD 213
I LI SENF +AV++ALGS + NKYSEGYPGARYY GN++ID E LC +RAL+ F LD
Sbjct: 77 INLIPSENFTSQAVLDALGSPMQNKYSEGYPGARYYGGNEFIDASERLCQDRALETFGLD 136
Query: 214 SDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF 273
WGVNVQ S AN VY+ L+ DR+MGLD P GGHLSHGY TP KK+S S +
Sbjct: 137 PKEWGVNVQALSGAPANLYVYSALMDTHDRLMGLDLPHGGHLSHGYQTP-TKKISFISKY 195
Query: 274 FESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLM 333
FE+ PY+++ +TGYIDY KLEE A+ YRPKI++ G S+Y R DY R R+I DK A LM
Sbjct: 196 FETLPYRLDEKTGYIDYNKLEELAITYRPKIIVAGASAYSRLIDYARLREICDKVNAYLM 255
Query: 334 CDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIFFRRG-KKPRKQG 386
DMAHISGL+AAK + PF + DIVT+T+HKSLRGPRG +IFFRRG ++ K+G
Sbjct: 256 ADMAHISGLVAAKVMPGPFTHADIVTTTSHKSLRGPRGAMIFFRRGVRRTNKKG 309
>sp|O62585|GLYC_ENCCU Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=SHMT-1 PE=3 SV=2
Length = 460
Score = 282 bits (722), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/259 (54%), Positives = 183/259 (70%), Gaps = 2/259 (0%)
Query: 132 LPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTG 191
L +ADPE+ ++ E +RQ K I LIASEN+ ++ MEA GS LTNKYSEG G RYY G
Sbjct: 14 LEMADPELHALICGEVERQKKTINLIASENYAHQSAMEACGSVLTNKYSEGRVGERYYGG 73
Query: 192 NQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPS 251
++D+IE LC +RAL+ F LD D WGVNVQPYS + ANFA+YT ++ PG RIMGLD PS
Sbjct: 74 THWVDRIELLCQKRALELFGLDPDVWGVNVQPYSGSPANFAIYTAVVPPGGRIMGLDLPS 133
Query: 252 GGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS 311
GGHL+HGY T +K+SA+S++F+S PY V G IDYE LE+ D+ P ILICG S+
Sbjct: 134 GGHLTHGYKTK-TRKISASSVYFDSRPYTVG-SNGLIDYEGLEKTFTDFLPHILICGYSA 191
Query: 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG 371
Y R+ DY R + IA + GA L D++HIS L+A+ + SPF++CDIV +TT K LRGPRG
Sbjct: 192 YSRDIDYKRLQSIAGRNGAFLFADISHISPLVASGLMNSPFEHCDIVMTTTQKGLRGPRG 251
Query: 372 GIIFFRRGKKPRKQGIPLN 390
+IF+RR + + L+
Sbjct: 252 ALIFYRRAVTKNGETVDLD 270
>sp|Q8A9S7|GLYA_BACTN Serine hydroxymethyltransferase OS=Bacteroides thetaiotaomicron
(strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 /
VPI-5482) GN=glyA PE=3 SV=1
Length = 426
Score = 266 bits (681), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/260 (52%), Positives = 174/260 (66%), Gaps = 16/260 (6%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
D IFDI+EKE QRQ KGIELIASENFV VM+A+GS LTNKY+EGYPG RYY G + +
Sbjct: 4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVV 63
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
DQ E + +R + F + W NVQP+S AN AV+ +L PGD+ MGL+ GGHL
Sbjct: 64 DQSEQIAIDRLKEIFGAE---WA-NVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHL 119
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
SHG V+ + I + Y +N +TG +DY+++EE A+ +PK++I GGS+Y RE
Sbjct: 120 SHG------SLVNTSGIIYTPCEYNLNQETGRVDYDQMEEVALREKPKMIIGGGSAYSRE 173
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
WDY R R+IADK GA+LM DMAH +GLIAA L +P Y IVTSTTHK+LRGPRGG+I
Sbjct: 174 WDYKRMREIADKVGAILMIDMAHPAGLIAAGLLENPVKYAHIVTSTTHKTLRGPRGGVIM 233
Query: 376 FRR------GKKPRKQGIPL 389
+ GKK K I +
Sbjct: 234 MGKDFPNPWGKKTPKGEIKM 253
>sp|A6L5K3|GLYA_BACV8 Serine hydroxymethyltransferase OS=Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154) GN=glyA PE=3 SV=1
Length = 426
Score = 266 bits (679), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/260 (52%), Positives = 174/260 (66%), Gaps = 16/260 (6%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
D IFDI+EKE QRQ KGIELIASENFV VM+A+GS LTNKY+EGYPG RYY G + +
Sbjct: 4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVV 63
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
DQ E + +R + F + W NVQP+S AN AV+ +L PGD+ MGL+ GGHL
Sbjct: 64 DQSEQIAIDRLKQIFGAE---WA-NVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHL 119
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
SHG V+ + I + Y +N +TG +DY+++EE A+ +PK++I GGS+Y RE
Sbjct: 120 SHG------SLVNTSGIIYTPCEYNLNKETGRVDYDQMEEIALREKPKMIIGGGSAYSRE 173
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
WDY R R+IADK GA+LM DMAH +GLIAA L +P Y IVTSTTHK+LRGPRGG+I
Sbjct: 174 WDYKRMREIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGVIM 233
Query: 376 FRR------GKKPRKQGIPL 389
+ GKK K I +
Sbjct: 234 MGKDFPNPWGKKTPKGEIKM 253
>sp|A6LBG7|GLYA_PARD8 Serine hydroxymethyltransferase OS=Parabacteroides distasonis
(strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=glyA PE=3
SV=1
Length = 426
Score = 265 bits (677), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 132/243 (54%), Positives = 171/243 (70%), Gaps = 10/243 (4%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
D IFDI+EKE QRQ KGIELIASENFV VM+A+GS LTNKY+EGYPG RYY G + +
Sbjct: 4 DNIIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVV 63
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
DQ E + ER K F+ + W NVQP+S AN AV+ +L PGD +GL+ GGHL
Sbjct: 64 DQSETIAIERLKKLFNAE---WA-NVQPHSGAQANAAVFFAVLNPGDTFLGLNLSHGGHL 119
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
SHG +P V+++ + + + Y V TG +DY+++EE A+ +PK+++ GGS+Y R+
Sbjct: 120 SHG--SP----VNSSGVLYHATEYNVKEDTGRVDYDQMEEVALREKPKLIVGGGSAYSRD 173
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
WDY R R+IADK GA+LM DMAH +GLIAA L +P +Y IVTSTTHK+LRGPRGGII
Sbjct: 174 WDYKRMREIADKVGALLMIDMAHPAGLIAAGLLNNPLEYAHIVTSTTHKTLRGPRGGIIL 233
Query: 376 FRR 378
+
Sbjct: 234 LGK 236
>sp|Q64U78|GLYA_BACFR Serine hydroxymethyltransferase OS=Bacteroides fragilis (strain
YCH46) GN=glyA PE=3 SV=1
Length = 426
Score = 265 bits (676), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/260 (52%), Positives = 173/260 (66%), Gaps = 16/260 (6%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
D IFDI+EKE QRQ KGIELIASENFV VMEA+GS LTNKY+EGYPG RYY G + +
Sbjct: 4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMEAMGSCLTNKYAEGYPGKRYYGGCEVV 63
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
DQ E + +R + F + W NVQP+S AN AV+ +L PGD+ MGL+ GGHL
Sbjct: 64 DQSEQIAIDRLKEIFGAE---WA-NVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHL 119
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
SHG V+ + I + Y + +TG +DY+++EE A+ +PK++I GGS+Y RE
Sbjct: 120 SHG------SLVNTSGIIYTPCEYNLKQETGRVDYDQMEEVALREKPKMIIGGGSAYSRE 173
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
WDY R R+IADK GA+LM DMAH +GLIAA L +P Y IVTSTTHK+LRGPRGG+I
Sbjct: 174 WDYKRMREIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGVIM 233
Query: 376 FRR------GKKPRKQGIPL 389
+ GKK K I +
Sbjct: 234 MGKDFPNPWGKKTPKGEIKM 253
>sp|Q5LD58|GLYA_BACFN Serine hydroxymethyltransferase OS=Bacteroides fragilis (strain
ATCC 25285 / NCTC 9343) GN=glyA PE=3 SV=1
Length = 426
Score = 265 bits (676), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/260 (52%), Positives = 173/260 (66%), Gaps = 16/260 (6%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
D IFDI+EKE QRQ KGIELIASENFV VMEA+GS LTNKY+EGYPG RYY G + +
Sbjct: 4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMEAMGSCLTNKYAEGYPGKRYYGGCEVV 63
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
DQ E + +R + F + W NVQP+S AN AV+ +L PGD+ MGL+ GGHL
Sbjct: 64 DQSEQIAIDRLKEIFGAE---WA-NVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHL 119
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
SHG V+ + I + Y + +TG +DY+++EE A+ +PK++I GGS+Y RE
Sbjct: 120 SHG------SLVNTSGIIYTPCEYNLKQETGRVDYDQMEEVALREKPKMIIGGGSAYSRE 173
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
WDY R R+IADK GA+LM DMAH +GLIAA L +P Y IVTSTTHK+LRGPRGG+I
Sbjct: 174 WDYKRMREIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGVIM 233
Query: 376 FRR------GKKPRKQGIPL 389
+ GKK K I +
Sbjct: 234 MGKDFPNPWGKKTPKGEIKM 253
>sp|Q3A934|GLYA_CARHZ Serine hydroxymethyltransferase OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=glyA PE=3
SV=1
Length = 421
Score = 262 bits (669), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/271 (50%), Positives = 175/271 (64%), Gaps = 18/271 (6%)
Query: 129 NQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARY 188
N L DPEIF+ MEKE RQ + IELIASENFV RAVMEA+GSHLTNKY+EG PG RY
Sbjct: 5 NLRLKDVDPEIFEAMEKELSRQREKIELIASENFVSRAVMEAMGSHLTNKYAEGLPGKRY 64
Query: 189 YTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLD 248
Y G +Y+D +ENL ERA K F + VNVQP+S AN A Y L PGD ++G++
Sbjct: 65 YGGCEYVDVVENLARERAKKLFGAEH----VNVQPHSGAQANMAAYMAFLEPGDTVLGMN 120
Query: 249 SPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308
GGHL+HG +P V+ + + Y V P T I+YEK+ E A ++PK+++ G
Sbjct: 121 LAHGGHLTHG--SP----VNFSGKLYNFVSYGVEPDTEKINYEKVFELAYKHKPKMIVAG 174
Query: 309 GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRG 368
S+YPR D+ ++IAD+ GA LM DMAHI+GL+AA SP Y D+VT+TTHK+LRG
Sbjct: 175 ASAYPRVIDFKHLKEIADEVGAYLMVDMAHIAGLVAAGLHPSPIPYADVVTTTTHKTLRG 234
Query: 369 PRGGIIFFR--------RGKKPRKQGIPLNH 391
PRGG+IF + + P QG PL H
Sbjct: 235 PRGGVIFCKAEHAAKIDKTVFPGVQGGPLMH 265
>sp|Q6AM21|GLYA_DESPS Serine hydroxymethyltransferase OS=Desulfotalea psychrophila
(strain LSv54 / DSM 12343) GN=glyA PE=3 SV=1
Length = 425
Score = 262 bits (669), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/251 (52%), Positives = 169/251 (67%), Gaps = 11/251 (4%)
Query: 125 RAWGNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYP 184
R +L DPEIF ++++E+ RQ I LIASEN+V AV+EA GS LTNKYSEGYP
Sbjct: 6 RGDAMTALQQQDPEIFSLIQQEEVRQHNKIRLIASENYVSSAVLEATGSILTNKYSEGYP 65
Query: 185 GARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRI 244
G RYY G Q IDQIE++ +RA F + VNVQPYS + AN AVY L PGD I
Sbjct: 66 GKRYYEGQQLIDQIESIAIDRAKAVFGAEH----VNVQPYSGSPANMAVYLAFLKPGDTI 121
Query: 245 MGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKI 304
+G+ P GGHL+HG KVS + +F + Y +N + G +DYE++ KA++ +PKI
Sbjct: 122 LGMALPHGGHLTHG------SKVSISGKYFNAVSYALN-EEGILDYEEIRNKALECKPKI 174
Query: 305 LICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHK 364
LI G S+YPR D+ +FR+IAD+ GA+LM DMAH +GL+A SPF Y D+VT+TTHK
Sbjct: 175 LIAGHSAYPRILDFAKFREIADEVGALLMVDMAHFAGLVAGGVHPSPFPYADVVTTTTHK 234
Query: 365 SLRGPRGGIIF 375
SLRGPRG +I
Sbjct: 235 SLRGPRGAMIM 245
>sp|A6Q478|GLYA_NITSB Serine hydroxymethyltransferase OS=Nitratiruptor sp. (strain
SB155-2) GN=glyA PE=3 SV=1
Length = 415
Score = 259 bits (662), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/265 (50%), Positives = 178/265 (67%), Gaps = 20/265 (7%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
DP +++I EKE QRQ +E+IASENF AVMEA+GS TNKY+EGYPG RYY G +Y
Sbjct: 8 DPAVYEIFEKELQRQTDHLEMIASENFTSPAVMEAMGSVFTNKYAEGYPGKRYYGGCEYA 67
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
D IE L +RA + F + VNVQP+S + AN VY LL P D+I+G+D GGHL
Sbjct: 68 DAIEELAIQRAKELFGCEF----VNVQPHSGSQANQGVYLALLKPYDKILGMDLSHGGHL 123
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
+HG KV+A+ ++SF Y VN + G+IDY+++ + A +PK+++CG S+YPR
Sbjct: 124 THG------AKVNASGKIYQSFFYGVNDE-GWIDYDRVLDIAKIVKPKLIVCGASAYPRV 176
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
D+ +FR+IAD+ GA+LM D+AHI+GL+AA E SPF YCD+VT+TTHK+LRGPRGG+I
Sbjct: 177 IDFKKFREIADEVGALLMADIAHIAGLVAAGEHPSPFPYCDVVTTTTHKTLRGPRGGMIM 236
Query: 376 FRRGKKPRK---------QGIPLNH 391
+K QG PL H
Sbjct: 237 TNDADIAKKINSAIFPGIQGGPLVH 261
>sp|Q3AW18|GLYA_SYNS9 Serine hydroxymethyltransferase OS=Synechococcus sp. (strain
CC9902) GN=glyA PE=3 SV=1
Length = 429
Score = 259 bits (661), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/272 (48%), Positives = 174/272 (63%), Gaps = 19/272 (6%)
Query: 129 NQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARY 188
N L ADPEI ++++E+ RQ +ELIASENF +AVM+A GS LTNKY+EG P RY
Sbjct: 10 NAGLASADPEISRLIDQERHRQETHLELIASENFASQAVMQAQGSVLTNKYAEGLPAKRY 69
Query: 189 YTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLD 248
Y G +++D IE L ERA + FD W NVQP+S ANFAV+ LL PGD IMGLD
Sbjct: 70 YGGCEHVDAIETLAIERAKQLFDA---AWA-NVQPHSGAQANFAVFLALLKPGDTIMGLD 125
Query: 249 SPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308
GGHL+HG V+ + +F Y V+P T +D E + + A++++PK+++CG
Sbjct: 126 LSHGGHLTHG------SPVNVSGKWFNVVQYGVDPTTQRLDMEAIRKLALEHKPKLIVCG 179
Query: 309 GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRG 368
S+YPR D+ FR IAD+ GA L+ DMAHI+GL+AA SP +CD+VT+TTHK+LRG
Sbjct: 180 YSAYPRTIDFAAFRSIADEVGAFLLADMAHIAGLVAAGVHPSPVPHCDVVTTTTHKTLRG 239
Query: 369 PRGGIIF---------FRRGKKPRKQGIPLNH 391
PRGG+I F + P QG PL H
Sbjct: 240 PRGGLILCRDAEFAKKFDKAVFPGTQGGPLEH 271
>sp|Q7MXW0|GLYA_PORGI Serine hydroxymethyltransferase OS=Porphyromonas gingivalis (strain
ATCC BAA-308 / W83) GN=glyA PE=3 SV=1
Length = 426
Score = 258 bits (660), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 166/243 (68%), Gaps = 10/243 (4%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
D IFD++EKE QRQ KGIELIASENFV VM+A+GS +TNKY+EGYPG RYY G + +
Sbjct: 4 DSVIFDLIEKEHQRQLKGIELIASENFVSEQVMQAMGSCMTNKYAEGYPGKRYYGGCEVV 63
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
DQ E + +R + + + W NVQP+S AN AV L GD MGL+ GGHL
Sbjct: 64 DQSEQIAIDRIKQLYGAE---WA-NVQPHSGAQANMAVLLACLEAGDTFMGLNLEHGGHL 119
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
SHG V+++ I + Y ++ +TG +DY+ +E+ A++++PK++I GGS+Y RE
Sbjct: 120 SHG------SLVNSSGILYRPIGYNLSEETGMVDYDHMEKMAIEHKPKLIIGGGSAYSRE 173
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
WDY R R+IADK GA+LM DMAH +GLIAA L +P Y IVTSTTHK+LRGPRGGII
Sbjct: 174 WDYKRMREIADKVGALLMIDMAHPAGLIAAGLLENPVKYAHIVTSTTHKTLRGPRGGIIL 233
Query: 376 FRR 378
+
Sbjct: 234 MGK 236
>sp|B2RGR2|GLYA_PORG3 Serine hydroxymethyltransferase OS=Porphyromonas gingivalis (strain
ATCC 33277 / DSM 20709 / JCM 12257) GN=glyA PE=3 SV=1
Length = 426
Score = 258 bits (660), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 166/243 (68%), Gaps = 10/243 (4%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
D IFD++EKE QRQ KGIELIASENFV VM+A+GS +TNKY+EGYPG RYY G + +
Sbjct: 4 DSVIFDLIEKEHQRQLKGIELIASENFVSEQVMQAMGSCMTNKYAEGYPGKRYYGGCEVV 63
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
DQ E + +R + + + W NVQP+S AN AV L GD MGL+ GGHL
Sbjct: 64 DQSEQIAIDRIKQLYGAE---WA-NVQPHSGAQANMAVLLACLEAGDTFMGLNLEHGGHL 119
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
SHG V+++ I + Y ++ +TG +DY+ +E+ A++++PK++I GGS+Y RE
Sbjct: 120 SHG------SLVNSSGILYRPIGYNLSEETGMVDYDHMEKMAIEHKPKLIIGGGSAYSRE 173
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
WDY R R+IADK GA+LM DMAH +GLIAA L +P Y IVTSTTHK+LRGPRGGII
Sbjct: 174 WDYKRMREIADKVGALLMIDMAHPAGLIAAGLLENPVKYAHIVTSTTHKTLRGPRGGIIL 233
Query: 376 FRR 378
+
Sbjct: 234 MGK 236
>sp|B0S1N3|GLYA_FINM2 Serine hydroxymethyltransferase OS=Finegoldia magna (strain ATCC
29328) GN=glyA PE=3 SV=1
Length = 412
Score = 255 bits (652), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 128/270 (47%), Positives = 174/270 (64%), Gaps = 18/270 (6%)
Query: 130 QSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYY 189
Q+L DPE+F + E +RQ + IELIASENFV +AV+E +G+ LTNKY+EGYPG RYY
Sbjct: 6 QNLENFDPEVFGYLNDEIKRQEEHIELIASENFVSKAVLETMGTELTNKYAEGYPGKRYY 65
Query: 190 TGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDS 249
G +++D+IE L +R K F+ D NVQP+ +AN AVY +L PGD ++G+
Sbjct: 66 GGCEHVDKIEQLAIDRLKKLFNADH----ANVQPHCGANANIAVYVAVLKPGDTVLGMRL 121
Query: 250 PSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309
GGHL+HG V+ + F+ Y V+P+TG IDYE + E A+ ++PK+++ G
Sbjct: 122 TEGGHLTHG------SPVNMSGKFYNFVDYGVDPETGTIDYENVRELALKHKPKLIVAGA 175
Query: 310 SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP 369
S+YPR D+ +FR+IAD+ GA LM DMAHI+GL+A + SP Y D VT+TTHK+LRGP
Sbjct: 176 SAYPRIIDFKKFREIADEVGAYLMVDMAHIAGLVATGDHPSPVPYADFVTTTTHKTLRGP 235
Query: 370 RGGIIFFRRGKK--------PRKQGIPLNH 391
RGG I + K P QG PL H
Sbjct: 236 RGGAILCKEEHKKLLDKSVFPGFQGGPLEH 265
>sp|B1I6M4|GLYA_DESAP Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain
MP104C) GN=glyA PE=3 SV=1
Length = 415
Score = 254 bits (650), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/273 (49%), Positives = 170/273 (62%), Gaps = 19/273 (6%)
Query: 127 WGNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGA 186
W N+SL DPEI + E RQ +ELIASENFV RAV+EA GS LTNKY+EGYPGA
Sbjct: 3 W-NRSLAETDPEIARAIALEITRQGAKLELIASENFVSRAVLEAQGSVLTNKYAEGYPGA 61
Query: 187 RYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMG 246
RYY G +Y+D +E++ RA + F NVQP+S AN A Y L PGD IMG
Sbjct: 62 RYYGGCEYVDIVESVAIRRAKEIFGAGH----ANVQPHSGAQANMAAYFAFLEPGDTIMG 117
Query: 247 LDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILI 306
+ GGHL+HG K++ + +F PY V +TG IDY+++ A ++RPK+++
Sbjct: 118 MRLAHGGHLTHG------AKINFSGRYFRYVPYGVEEETGRIDYDRMHAIAREHRPKLIV 171
Query: 307 CGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL 366
G S+YPRE D+ R R IAD GA+LM DMAHI+GLIAA SP Y D+VT+TTHK+L
Sbjct: 172 GGASAYPRELDFARMRAIADDVGALLMIDMAHIAGLIAAGLHMSPVPYADVVTTTTHKTL 231
Query: 367 RGPRGGIIF--------FRRGKKPRKQGIPLNH 391
RGPRGG+I + P QG PL H
Sbjct: 232 RGPRGGMILCPEEYAAAIDKAVFPGIQGGPLMH 264
>sp|P77962|GLYA_SYNY3 Serine hydroxymethyltransferase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=glyA PE=3 SV=1
Length = 427
Score = 254 bits (649), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 132/269 (49%), Positives = 173/269 (64%), Gaps = 19/269 (7%)
Query: 132 LPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTG 191
L +DP + I+++E QRQ IELIASENF AVM A GS LTNKY+EG PG RYY G
Sbjct: 9 LATSDPALAAIIDRELQRQRTHIELIASENFTSAAVMAAQGSVLTNKYAEGLPGKRYYGG 68
Query: 192 NQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPS 251
+++DQ E L R + F NVQP+S ANFAV+ LL PGD IMG+D
Sbjct: 69 CEFVDQAETLAISRVKELFGAAH----ANVQPHSGAQANFAVFLTLLQPGDTIMGMDLSH 124
Query: 252 GGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS 311
GGHL+HG V+ + +FE Y V +TG +DY+K+ ++A++ +PK+LICG S+
Sbjct: 125 GGHLTHG------SPVNVSGKWFEVAHYGVEKETGRLDYDKIRQQALEVKPKLLICGYSA 178
Query: 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG 371
YPR+ ++ +FR IAD+ GA LM D+AHI+GL+A+ SP YCD+VT+TTHK+LRGPRG
Sbjct: 179 YPRQIEFDKFRAIADEVGAYLMADIAHIAGLVASGHHPSPLPYCDVVTTTTHKTLRGPRG 238
Query: 372 GIIFFRR---GKK------PRKQGIPLNH 391
G+I GKK P QG PL H
Sbjct: 239 GLIMTNNEELGKKFDKSVFPGTQGGPLEH 267
>sp|A4ITJ9|GLYA_GEOTN Serine hydroxymethyltransferase OS=Geobacillus thermodenitrificans
(strain NG80-2) GN=glyA PE=3 SV=1
Length = 412
Score = 254 bits (648), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 131/268 (48%), Positives = 177/268 (66%), Gaps = 18/268 (6%)
Query: 132 LPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTG 191
LP DP++F +E+E++RQ IELIASENFV RAVMEA GS +TNKY+EGYPG RYY G
Sbjct: 4 LPQQDPQVFATIEQERKRQHAKIELIASENFVSRAVMEAQGSVMTNKYAEGYPGRRYYGG 63
Query: 192 NQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPS 251
+Y+D +E+L ERA + F + NVQP+S AN AVY +L PGD ++G++
Sbjct: 64 CEYVDVVEDLARERAKQLFGAEH----ANVQPHSGAQANMAVYFTVLKPGDTVLGMNLSH 119
Query: 252 GGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS 311
GGHL+HG V+ + + + Y V+P+T IDY+ + EKA +RPK+++ G S+
Sbjct: 120 GGHLTHG------SPVNFSGVQYNFVEYGVDPETHVIDYDDVREKARLHRPKLIVAGASA 173
Query: 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG 371
YPR D+ +FR+IAD+ GA LM DMAHI+GL+AA +P Y VT+TTHK+LRGPRG
Sbjct: 174 YPRVIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG 233
Query: 372 GII-----FFRRGKK---PRKQGIPLNH 391
G+I F ++ K P QG PL H
Sbjct: 234 GMILCQEQFAKQIDKSIFPGIQGGPLMH 261
>sp|Q8R887|GLYA_THETN Serine hydroxymethyltransferase OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=glyA PE=3 SV=1
Length = 413
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/264 (49%), Positives = 169/264 (64%), Gaps = 18/264 (6%)
Query: 136 DPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195
DPEI +++ KE RQ IELIASENFV RAVMEA+G+ LTNKY+EGYPG RYY G +Y+
Sbjct: 10 DPEIAEVILKELNRQRNKIELIASENFVSRAVMEAMGTPLTNKYAEGYPGRRYYGGCEYV 69
Query: 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHL 255
D E L ER K F + NVQP+S AN A Y LL PGD ++G+D GGHL
Sbjct: 70 DMAEELARERLKKLFGAEH----ANVQPHSGAQANMAAYFALLKPGDTVLGMDLAHGGHL 125
Query: 256 SHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPRE 315
+HG KV+ + + Y V TGYIDY+++E+ A ++PK+++ G S+YPR
Sbjct: 126 THG------SKVNFSGQIYNFVSYGVREDTGYIDYDQVEDLAKKHKPKLIVAGASAYPRI 179
Query: 316 WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIF 375
D+ +FR+IADK GA LM DMAHI+GL+AA +P Y D+VT+TTHK+LRGPRGG I
Sbjct: 180 IDFKKFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGAIL 239
Query: 376 FR--------RGKKPRKQGIPLNH 391
+ + P QG PL H
Sbjct: 240 CKQEHAKAIDKALFPGTQGGPLMH 263
>sp|A3PAX9|GLYA_PROM0 Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain
MIT 9301) GN=glyA PE=3 SV=1
Length = 423
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/271 (49%), Positives = 178/271 (65%), Gaps = 19/271 (7%)
Query: 130 QSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYY 189
Q+L +DP I + ++ EK RQ +ELIASENF AVMEA GS LTNKY+EG P RYY
Sbjct: 5 QNLKESDPVISNFIKSEKNRQETHLELIASENFASIAVMEAQGSVLTNKYAEGLPQKRYY 64
Query: 190 TGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDS 249
G +++DQIE L +RA K F+ NW NVQP+S AN AV+ LL PGD IMG+D
Sbjct: 65 GGCEFVDQIEELAIQRAKKLFNA---NWA-NVQPHSGAQANAAVFLSLLKPGDTIMGMDL 120
Query: 250 PSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309
GGHL+HG V+ + +F + Y VN +T ++++++ E A++ +PK++ICG
Sbjct: 121 SHGGHLTHG------SPVNMSGKWFNAVHYGVNKETSELNFDEIREIALETKPKLIICGY 174
Query: 310 SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP 369
S+YPR D+ FR IAD+ GA LM D+AHI+GL+A+K +P YCD+VT+TTHK+LRGP
Sbjct: 175 SAYPRTIDFESFRNIADEVGAFLMADIAHIAGLVASKLHPNPIPYCDVVTTTTHKTLRGP 234
Query: 370 RGGIIFFRR---GKK------PRKQGIPLNH 391
RGG+I + GKK P QG PL H
Sbjct: 235 RGGLILCKDAEFGKKFDKSVFPGTQGGPLEH 265
>sp|Q0IDD8|GLYA_SYNS3 Serine hydroxymethyltransferase OS=Synechococcus sp. (strain
CC9311) GN=glyA PE=3 SV=1
Length = 429
Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/272 (48%), Positives = 175/272 (64%), Gaps = 19/272 (6%)
Query: 129 NQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARY 188
N SL ADP I ++++E+ RQ +ELIASENF +AVMEA GS LTNKY+EG P RY
Sbjct: 10 NASLKAADPAIAGLIDQEQMRQETHLELIASENFTSKAVMEAQGSVLTNKYAEGLPHKRY 69
Query: 189 YTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLD 248
Y G +++D IE L RA + F W NVQP+S ANFAV+ LL PGD I+G+D
Sbjct: 70 YGGCEHVDAIEELAITRAKQLF---GAAWA-NVQPHSGAQANFAVFLALLQPGDTILGMD 125
Query: 249 SPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308
GGHL+HG V+ + +F Y V+ +T +D E + + A++++PK++ICG
Sbjct: 126 LSHGGHLTHG------SPVNVSGKWFNVVQYGVDKETQRLDMEAIRKLALEHKPKLIICG 179
Query: 309 GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRG 368
S+YPR D+ FR IAD+ GA L+ DMAHI+GL+AA ASP +CD+VT+TTHK+LRG
Sbjct: 180 YSAYPRSIDFAAFRSIADEVGAYLLADMAHIAGLVAAGVHASPVPHCDVVTTTTHKTLRG 239
Query: 369 PRGGII------FFRRGKK---PRKQGIPLNH 391
PRGG+I F RR K P QG PL H
Sbjct: 240 PRGGLILCRDAEFARRFDKAVFPGSQGGPLEH 271
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,713,476
Number of Sequences: 539616
Number of extensions: 7409755
Number of successful extensions: 22970
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 20248
Number of HSP's gapped (non-prelim): 884
length of query: 403
length of database: 191,569,459
effective HSP length: 120
effective length of query: 283
effective length of database: 126,815,539
effective search space: 35888797537
effective search space used: 35888797537
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)