Query 015609
Match_columns 403
No_of_seqs 330 out of 2530
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 07:54:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015609.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015609hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02271 serine hydroxymethylt 100.0 1.3E-85 2.9E-90 683.7 29.5 387 3-395 1-414 (586)
2 KOG2467 Glycine/serine hydroxy 100.0 6.8E-70 1.5E-74 532.2 20.4 283 116-399 5-304 (477)
3 COG0112 GlyA Glycine/serine hy 100.0 7.5E-66 1.6E-70 510.4 20.2 256 130-395 5-263 (413)
4 PF00464 SHMT: Serine hydroxym 100.0 5.6E-61 1.2E-65 486.9 14.0 263 132-395 1-279 (399)
5 PRK13580 serine hydroxymethylt 100.0 8.5E-51 1.8E-55 420.9 21.6 255 130-395 28-318 (493)
6 PLN03226 serine hydroxymethylt 100.0 3E-50 6.4E-55 419.4 24.6 254 125-379 8-261 (475)
7 PTZ00094 serine hydroxymethylt 100.0 4.3E-45 9.4E-50 378.3 24.8 264 130-395 13-282 (452)
8 PRK13034 serine hydroxymethylt 100.0 3.3E-40 7.1E-45 338.7 23.1 256 127-392 4-262 (416)
9 PRK00011 glyA serine hydroxyme 100.0 3.5E-34 7.6E-39 292.2 24.6 240 130-379 4-243 (416)
10 cd00378 SHMT Serine-glycine hy 100.0 1.1E-33 2.5E-38 286.4 24.5 238 134-379 2-239 (402)
11 COG1104 NifS Cysteine sulfinat 100.0 1.9E-28 4.1E-33 246.3 18.3 214 157-392 7-231 (386)
12 COG0520 csdA Selenocysteine ly 99.9 8.1E-26 1.8E-30 231.7 21.6 224 158-401 29-260 (405)
13 KOG1549 Cysteine desulfurase N 99.9 4.2E-25 9.1E-30 223.4 18.6 216 157-395 49-273 (428)
14 PLN02651 cysteine desulfurase 99.9 3E-21 6.5E-26 194.0 20.7 203 157-379 5-215 (364)
15 TIGR03402 FeS_nifS cysteine de 99.9 1.3E-20 2.8E-25 189.8 20.1 206 157-382 5-216 (379)
16 PF00266 Aminotran_5: Aminotra 99.9 9.3E-21 2E-25 190.5 18.3 202 157-379 5-216 (371)
17 PRK02769 histidine decarboxyla 99.9 5.7E-20 1.2E-24 187.2 22.1 200 163-379 34-247 (380)
18 PLN03032 serine decarboxylase; 99.8 9.8E-20 2.1E-24 185.1 22.6 200 163-379 35-250 (374)
19 PRK09295 bifunctional cysteine 99.8 9.8E-20 2.1E-24 185.6 20.1 203 157-379 29-241 (406)
20 TIGR03235 DNA_S_dndA cysteine 99.8 1.4E-19 2.9E-24 180.7 20.4 202 157-379 4-215 (353)
21 TIGR02006 IscS cysteine desulf 99.8 1.6E-19 3.6E-24 184.0 20.5 202 157-379 9-219 (402)
22 cd06451 AGAT_like Alanine-glyo 99.8 1.1E-19 2.3E-24 181.1 18.1 199 154-379 1-202 (356)
23 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 1.6E-19 3.5E-24 183.4 19.0 199 157-379 26-236 (387)
24 PRK10874 cysteine sulfinate de 99.8 3.2E-19 6.9E-24 181.2 20.9 203 157-379 25-237 (401)
25 PLN02409 serine--glyoxylate am 99.8 1.4E-19 3E-24 185.0 18.0 199 152-379 9-217 (401)
26 TIGR01977 am_tr_V_EF2568 cyste 99.8 6.2E-19 1.3E-23 176.6 21.7 201 162-380 11-216 (376)
27 PRK14012 cysteine desulfurase; 99.8 4E-19 8.7E-24 181.1 20.5 203 157-379 9-221 (404)
28 TIGR01788 Glu-decarb-GAD gluta 99.8 2.9E-19 6.2E-24 184.8 19.6 201 160-380 50-278 (431)
29 TIGR03392 FeS_syn_CsdA cystein 99.8 4.3E-19 9.2E-24 180.1 20.5 203 157-379 22-234 (398)
30 PRK02948 cysteine desulfurase; 99.8 4.9E-19 1.1E-23 178.5 20.5 203 157-380 6-216 (381)
31 PLN02855 Bifunctional selenocy 99.8 1.3E-18 2.8E-23 178.4 21.7 204 154-379 36-250 (424)
32 TIGR02326 transamin_PhnW 2-ami 99.8 5E-19 1.1E-23 177.3 18.1 200 152-379 3-207 (363)
33 TIGR03403 nifS_epsilon cystein 99.8 1.2E-18 2.6E-23 175.9 20.9 205 157-382 5-220 (382)
34 cd06453 SufS_like Cysteine des 99.8 1.4E-18 3.1E-23 174.1 20.2 204 157-379 5-216 (373)
35 TIGR01979 sufS cysteine desulf 99.8 2E-18 4.3E-23 175.1 20.6 203 157-379 24-236 (403)
36 TIGR01822 2am3keto_CoA 2-amino 99.8 1.7E-18 3.6E-23 174.9 19.0 199 154-379 40-255 (393)
37 COG0399 WecE Predicted pyridox 99.8 1.1E-18 2.3E-23 176.7 16.1 186 163-381 13-201 (374)
38 TIGR01976 am_tr_V_VC1184 cyste 99.8 2.9E-18 6.3E-23 173.4 19.2 202 157-379 23-232 (397)
39 COG0075 Serine-pyruvate aminot 99.8 3.6E-18 7.7E-23 173.0 17.9 198 153-379 6-209 (383)
40 PF01041 DegT_DnrJ_EryC1: DegT 99.8 4.8E-18 1E-22 171.3 18.7 184 165-380 5-191 (363)
41 PRK05613 O-acetylhomoserine am 99.8 3.6E-18 7.8E-23 177.0 17.0 194 154-378 34-233 (437)
42 PLN02724 Molybdenum cofactor s 99.8 4.4E-18 9.6E-23 188.2 18.2 206 158-379 41-278 (805)
43 COG0156 BioF 7-keto-8-aminopel 99.8 8.2E-18 1.8E-22 171.2 17.7 200 152-379 39-256 (388)
44 cd00615 Orn_deC_like Ornithine 99.8 1.8E-18 3.8E-23 169.6 12.4 165 202-379 64-236 (294)
45 TIGR03588 PseC UDP-4-keto-6-de 99.8 2.2E-17 4.8E-22 167.0 20.6 187 163-379 8-200 (380)
46 PRK11658 UDP-4-amino-4-deoxy-L 99.8 2.5E-17 5.4E-22 167.3 20.1 185 163-379 12-197 (379)
47 PRK08134 O-acetylhomoserine am 99.8 1.2E-17 2.7E-22 172.8 17.8 191 154-376 29-225 (433)
48 TIGR01814 kynureninase kynuren 99.8 1.4E-17 3E-22 170.1 16.9 208 153-378 28-247 (406)
49 TIGR01437 selA_rel uncharacter 99.7 4.4E-17 9.5E-22 164.8 18.8 184 159-378 21-223 (363)
50 PRK08114 cystathionine beta-ly 99.7 2.2E-17 4.7E-22 169.1 16.5 166 183-378 54-227 (395)
51 PRK13479 2-aminoethylphosphona 99.7 5.3E-17 1.2E-21 162.8 18.4 196 154-379 7-209 (368)
52 PRK07179 hypothetical protein; 99.7 7.6E-17 1.6E-21 164.6 19.5 199 152-379 54-265 (407)
53 cd00616 AHBA_syn 3-amino-5-hyd 99.7 1.3E-16 2.9E-21 157.9 18.8 156 203-379 24-183 (352)
54 TIGR00474 selA seryl-tRNA(sec) 99.7 1.5E-16 3.2E-21 165.6 19.7 196 159-379 89-303 (454)
55 cd06452 SepCysS Sep-tRNA:Cys-t 99.7 1.3E-16 2.8E-21 160.0 18.7 197 156-379 6-217 (361)
56 PRK08133 O-succinylhomoserine 99.7 6.2E-17 1.3E-21 165.3 16.2 193 155-379 27-225 (390)
57 PRK04311 selenocysteine syntha 99.7 5.3E-16 1.1E-20 161.9 22.7 196 159-379 94-308 (464)
58 PLN03227 serine palmitoyltrans 99.7 1.1E-16 2.5E-21 163.4 17.2 195 157-379 3-224 (392)
59 PRK13520 L-tyrosine decarboxyl 99.7 3.4E-16 7.3E-21 156.4 20.0 220 136-379 4-236 (371)
60 cd01494 AAT_I Aspartate aminot 99.7 2.4E-16 5.1E-21 138.2 16.5 162 202-377 5-170 (170)
61 TIGR02379 ECA_wecE TDP-4-keto- 99.7 2E-16 4.3E-21 160.9 18.0 185 162-379 8-197 (376)
62 PRK03080 phosphoserine aminotr 99.7 3.8E-17 8.3E-22 165.9 12.8 191 153-379 13-210 (378)
63 PRK05939 hypothetical protein; 99.7 1.9E-16 4.1E-21 162.3 17.8 188 155-375 13-206 (397)
64 cd06454 KBL_like KBL_like; thi 99.7 2.2E-16 4.8E-21 156.0 17.7 195 157-379 6-216 (349)
65 PRK08861 cystathionine gamma-s 99.7 1.3E-16 2.7E-21 163.2 16.4 168 182-379 44-217 (388)
66 TIGR03301 PhnW-AepZ 2-aminoeth 99.7 3.9E-16 8.4E-21 154.4 18.9 195 154-379 1-203 (355)
67 TIGR01329 cysta_beta_ly_E cyst 99.7 5.6E-17 1.2E-21 165.0 13.0 166 183-379 39-210 (378)
68 TIGR02539 SepCysS Sep-tRNA:Cys 99.7 2.4E-16 5.2E-21 159.2 17.4 195 160-379 17-224 (370)
69 PRK07812 O-acetylhomoserine am 99.7 3.1E-16 6.8E-21 162.5 18.0 194 154-378 34-233 (436)
70 TIGR01324 cysta_beta_ly_B cyst 99.7 1.9E-16 4E-21 161.3 15.6 167 183-379 42-214 (377)
71 PRK08574 cystathionine gamma-s 99.7 2E-16 4.4E-21 161.3 15.8 159 191-379 51-216 (385)
72 cd00614 CGS_like CGS_like: Cys 99.7 4.3E-16 9.2E-21 157.6 17.7 160 191-378 38-203 (369)
73 TIGR01328 met_gam_lyase methio 99.7 4E-16 8.8E-21 159.4 17.1 168 182-379 50-223 (391)
74 PRK07810 O-succinylhomoserine 99.7 4.1E-16 9E-21 160.0 17.0 168 182-379 61-234 (403)
75 COG2873 MET17 O-acetylhomoseri 99.7 2.9E-16 6.4E-21 156.0 15.0 208 152-391 25-239 (426)
76 PLN02414 glycine dehydrogenase 99.7 4.8E-16 1E-20 173.6 18.0 164 196-379 568-750 (993)
77 PRK09028 cystathionine beta-ly 99.7 4.5E-16 9.7E-21 159.4 16.4 160 191-378 59-224 (394)
78 TIGR03799 NOD_PanD_pyr putativ 99.7 1.4E-15 3.1E-20 160.8 20.2 177 191-379 123-349 (522)
79 TIGR01325 O_suc_HS_sulf O-succ 99.7 5.3E-16 1.2E-20 157.8 16.1 192 156-379 21-218 (380)
80 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 5.7E-16 1.2E-20 158.2 16.2 192 154-378 21-219 (386)
81 PLN02955 8-amino-7-oxononanoat 99.7 5.8E-16 1.2E-20 161.2 16.3 204 150-379 100-333 (476)
82 TIGR03812 tyr_de_CO2_Arch tyro 99.7 1.7E-15 3.6E-20 151.7 18.6 197 160-378 29-240 (373)
83 PRK07504 O-succinylhomoserine 99.7 6E-16 1.3E-20 158.5 15.7 168 182-379 56-229 (398)
84 PRK06767 methionine gamma-lyas 99.7 7.9E-16 1.7E-20 156.8 16.4 165 183-379 53-225 (386)
85 PRK05968 hypothetical protein; 99.7 8.4E-16 1.8E-20 156.9 16.4 193 154-379 28-226 (389)
86 PRK05937 8-amino-7-oxononanoat 99.7 1.8E-15 4E-20 152.8 18.7 200 153-379 5-226 (370)
87 COG0076 GadB Glutamate decarbo 99.7 1.4E-15 3.1E-20 158.3 18.1 231 130-380 38-293 (460)
88 PRK06176 cystathionine gamma-s 99.7 1.1E-15 2.4E-20 155.8 16.6 167 182-379 41-213 (380)
89 PRK07811 cystathionine gamma-s 99.7 1.2E-15 2.6E-20 155.8 16.8 160 191-379 59-225 (388)
90 PRK05994 O-acetylhomoserine am 99.7 1.5E-15 3.2E-20 157.1 17.7 158 191-376 61-224 (427)
91 PRK07503 methionine gamma-lyas 99.7 1.2E-15 2.6E-20 156.6 16.6 166 183-378 57-228 (403)
92 PRK08248 O-acetylhomoserine am 99.7 1.5E-15 3.3E-20 157.2 17.5 193 154-378 29-227 (431)
93 PRK06702 O-acetylhomoserine am 99.7 8.8E-16 1.9E-20 158.9 15.6 160 191-377 59-224 (432)
94 PRK05355 3-phosphoserine/phosp 99.7 7.2E-16 1.6E-20 156.0 13.5 201 153-379 4-211 (360)
95 PRK13238 tnaA tryptophanase/L- 99.7 2.2E-15 4.9E-20 157.2 17.5 169 190-379 75-275 (460)
96 cd00611 PSAT_like Phosphoserin 99.7 4.5E-16 9.8E-21 156.7 11.8 195 154-379 1-208 (355)
97 PRK15407 lipopolysaccharide bi 99.7 8.1E-15 1.7E-19 152.1 21.1 163 194-380 64-237 (438)
98 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 7E-15 1.5E-19 149.0 20.1 162 193-379 31-196 (375)
99 PRK07269 cystathionine gamma-s 99.7 1.5E-15 3.1E-20 154.1 15.1 166 182-380 45-216 (364)
100 cd06502 TA_like Low-specificit 99.7 2.6E-15 5.6E-20 148.0 16.4 194 158-378 3-210 (338)
101 PLN02483 serine palmitoyltrans 99.7 3.9E-15 8.5E-20 156.4 18.5 198 153-379 102-325 (489)
102 PRK08249 cystathionine gamma-s 99.7 2.2E-15 4.8E-20 154.4 16.2 160 191-378 62-227 (398)
103 PLN02880 tyrosine decarboxylas 99.7 2E-15 4.3E-20 158.7 16.2 179 192-379 117-323 (490)
104 PRK06939 2-amino-3-ketobutyrat 99.7 4.9E-15 1.1E-19 149.2 18.4 199 153-379 44-259 (397)
105 PRK06234 methionine gamma-lyas 99.6 2.7E-15 5.9E-20 153.7 16.5 168 182-379 55-230 (400)
106 PRK08776 cystathionine gamma-s 99.6 2.9E-15 6.3E-20 153.9 16.5 161 191-379 58-224 (405)
107 PRK08064 cystathionine beta-ly 99.6 3E-15 6.6E-20 152.9 16.1 160 191-379 52-217 (390)
108 PRK06084 O-acetylhomoserine am 99.6 4.5E-15 9.7E-20 153.5 17.4 192 154-378 23-221 (425)
109 PRK06434 cystathionine gamma-l 99.6 1.9E-15 4.2E-20 154.3 14.5 165 182-379 55-225 (384)
110 cd06450 DOPA_deC_like DOPA dec 99.6 8.8E-16 1.9E-20 151.9 11.4 170 192-375 33-228 (345)
111 COG0626 MetC Cystathionine bet 99.6 3.5E-15 7.6E-20 152.1 16.0 170 182-380 54-229 (396)
112 PRK07050 cystathionine beta-ly 99.6 4E-15 8.7E-20 152.3 16.5 194 154-379 30-229 (394)
113 TIGR01821 5aminolev_synth 5-am 99.6 6.2E-15 1.3E-19 150.1 17.6 200 152-379 45-261 (402)
114 TIGR01326 OAH_OAS_sulfhy OAH/O 99.6 4.9E-15 1.1E-19 152.7 16.7 165 183-377 49-219 (418)
115 PRK09064 5-aminolevulinate syn 99.6 9.6E-15 2.1E-19 148.8 18.5 200 152-379 46-262 (407)
116 PRK08045 cystathionine gamma-s 99.6 4.1E-15 9E-20 151.9 15.6 166 183-379 44-216 (386)
117 PRK13393 5-aminolevulinate syn 99.6 1.3E-14 2.7E-19 148.3 18.6 200 152-379 45-261 (406)
118 PLN02263 serine decarboxylase 99.6 3.1E-14 6.7E-19 148.1 21.7 172 194-379 130-317 (470)
119 PLN02509 cystathionine beta-ly 99.6 7.1E-15 1.5E-19 153.5 16.9 160 191-379 131-296 (464)
120 PLN02242 methionine gamma-lyas 99.6 5.3E-15 1.1E-19 152.6 15.0 162 191-379 74-241 (418)
121 TIGR00858 bioF 8-amino-7-oxono 99.6 2.3E-14 5E-19 141.8 18.8 198 153-379 18-231 (360)
122 PRK07671 cystathionine beta-ly 99.6 1.3E-14 2.9E-19 147.6 17.3 166 183-379 42-213 (377)
123 KOG2862 Alanine-glyoxylate ami 99.6 1.2E-14 2.6E-19 141.7 14.9 195 154-378 19-220 (385)
124 PRK13392 5-aminolevulinate syn 99.6 1.7E-14 3.7E-19 147.4 16.8 198 154-379 48-262 (410)
125 PRK08247 cystathionine gamma-s 99.6 1.4E-14 3E-19 146.7 16.0 167 182-379 43-215 (366)
126 TIGR02080 O_succ_thio_ly O-suc 99.6 1.6E-14 3.6E-19 147.2 16.4 164 185-379 45-215 (382)
127 PRK05967 cystathionine beta-ly 99.6 1.4E-14 3E-19 148.5 15.6 160 191-378 62-227 (395)
128 PRK13237 tyrosine phenol-lyase 99.6 1E-14 2.3E-19 150.8 14.4 173 188-380 73-276 (460)
129 PLN02590 probable tyrosine dec 99.6 4.6E-14 1E-18 149.6 19.7 180 191-379 164-371 (539)
130 cd00613 GDC-P Glycine cleavage 99.6 6.8E-14 1.5E-18 141.4 20.1 165 198-379 65-241 (398)
131 PLN02721 threonine aldolase 99.6 3.3E-14 7.2E-19 140.9 17.2 191 162-378 17-222 (353)
132 PRK05958 8-amino-7-oxononanoat 99.6 7.9E-14 1.7E-18 139.6 19.5 202 151-379 39-253 (385)
133 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 5.5E-15 1.2E-19 151.7 11.1 164 201-380 70-257 (417)
134 PRK04366 glycine dehydrogenase 99.6 4.3E-14 9.3E-19 148.2 17.4 195 160-379 79-292 (481)
135 TIGR01364 serC_1 phosphoserine 99.6 1.8E-14 3.9E-19 145.3 13.6 191 162-379 2-200 (349)
136 KOG1360 5-aminolevulinate synt 99.6 1.4E-14 3.1E-19 144.9 11.8 201 150-378 169-386 (570)
137 TIGR01366 serC_3 phosphoserine 99.6 1.1E-14 2.3E-19 147.4 11.0 192 153-378 4-200 (361)
138 cd00617 Tnase_like Tryptophana 99.6 5.9E-14 1.3E-18 145.4 16.5 164 195-379 55-250 (431)
139 PF01212 Beta_elim_lyase: Beta 99.6 2E-14 4.3E-19 141.7 12.3 195 158-379 3-210 (290)
140 PLN02822 serine palmitoyltrans 99.6 1.3E-13 2.7E-18 144.8 19.0 198 153-379 111-330 (481)
141 TIGR01825 gly_Cac_T_rel pyrido 99.6 1.5E-13 3.3E-18 138.3 18.4 202 151-379 33-247 (385)
142 TIGR00461 gcvP glycine dehydro 99.5 2.7E-13 5.9E-18 150.3 20.7 164 197-379 530-712 (939)
143 PRK06460 hypothetical protein; 99.5 9.1E-14 2E-18 141.4 15.5 161 191-379 43-209 (376)
144 TIGR02618 tyr_phenol_ly tyrosi 99.5 2.4E-14 5.1E-19 147.8 11.2 170 188-379 66-268 (450)
145 PRK05367 glycine dehydrogenase 99.5 3E-13 6.4E-18 151.6 20.6 163 197-378 542-723 (954)
146 PF00282 Pyridoxal_deC: Pyrido 99.5 2E-13 4.3E-18 139.0 17.3 179 190-380 72-279 (373)
147 PRK12566 glycine dehydrogenase 99.5 1.4E-13 3.1E-18 152.0 17.3 150 203-371 549-711 (954)
148 KOG0053 Cystathionine beta-lya 99.5 7.3E-14 1.6E-18 141.7 13.5 167 183-379 69-241 (409)
149 TIGR03531 selenium_SpcS O-phos 99.5 2.6E-13 5.5E-18 140.9 17.6 177 191-380 99-290 (444)
150 TIGR03576 pyridox_MJ0158 pyrid 99.5 4E-13 8.7E-18 135.4 18.4 183 160-379 27-219 (346)
151 PRK07582 cystathionine gamma-l 99.5 2.1E-13 4.5E-18 138.3 14.5 157 191-379 49-211 (366)
152 PRK15029 arginine decarboxylas 99.5 1.2E-13 2.7E-18 150.8 13.4 164 201-379 209-402 (755)
153 KOG1359 Glycine C-acetyltransf 99.5 1.6E-13 3.4E-18 133.1 9.6 198 151-379 66-278 (417)
154 COG2008 GLY1 Threonine aldolas 99.5 1.8E-12 3.9E-17 129.0 16.2 197 157-379 4-215 (342)
155 PRK07049 methionine gamma-lyas 99.4 2.7E-12 5.8E-17 132.9 16.4 167 185-379 77-259 (427)
156 PRK10534 L-threonine aldolase; 99.4 2.2E-12 4.9E-17 127.6 14.8 191 163-379 12-212 (333)
157 PRK12414 putative aminotransfe 99.4 3.4E-11 7.4E-16 122.2 20.8 220 138-379 17-252 (384)
158 cd00609 AAT_like Aspartate ami 99.4 1.2E-11 2.6E-16 120.9 16.8 146 221-379 63-221 (350)
159 PLN02452 phosphoserine transam 99.4 3.7E-12 8E-17 129.4 13.5 206 150-379 5-215 (365)
160 TIGR01141 hisC histidinol-phos 99.4 6.4E-12 1.4E-16 124.9 14.4 196 153-379 21-227 (346)
161 PRK06225 aspartate aminotransf 99.4 4.4E-11 9.6E-16 120.9 20.7 203 151-379 28-242 (380)
162 PF06838 Met_gamma_lyase: Meth 99.4 5.6E-12 1.2E-16 126.0 13.5 224 143-392 7-256 (403)
163 PRK06108 aspartate aminotransf 99.4 4.1E-11 8.8E-16 120.6 20.0 205 152-379 25-249 (382)
164 PRK13578 ornithine decarboxyla 99.3 5.5E-12 1.2E-16 137.0 12.4 163 201-378 178-370 (720)
165 PRK08361 aspartate aminotransf 99.3 4.7E-11 1E-15 121.3 18.1 205 152-379 34-254 (391)
166 PRK05957 aspartate aminotransf 99.3 1.6E-10 3.6E-15 117.4 21.8 204 152-379 28-250 (389)
167 PRK08960 hypothetical protein; 99.3 1.4E-10 3E-15 117.6 21.2 201 151-379 32-251 (387)
168 PRK00451 glycine dehydrogenase 99.3 1.1E-11 2.5E-16 128.0 12.8 156 202-379 117-285 (447)
169 PRK09082 methionine aminotrans 99.3 8.3E-11 1.8E-15 119.4 18.0 208 152-379 31-253 (386)
170 COG0436 Aspartate/tyrosine/aro 99.3 2.2E-10 4.7E-15 117.6 21.0 204 152-378 29-252 (393)
171 TIGR03811 tyr_de_CO2_Ent tyros 99.3 1.2E-10 2.7E-15 125.0 19.6 176 191-379 117-399 (608)
172 PRK14807 histidinol-phosphate 99.3 9.9E-11 2.1E-15 117.3 17.7 198 153-379 24-230 (351)
173 PRK07324 transaminase; Validat 99.3 8E-11 1.7E-15 119.3 15.5 159 203-378 68-238 (373)
174 PRK07550 hypothetical protein; 99.3 8.3E-10 1.8E-14 111.8 22.6 205 152-379 30-253 (386)
175 PRK07309 aromatic amino acid a 99.3 6.5E-10 1.4E-14 113.1 21.4 205 153-379 32-254 (391)
176 KOG1368 Threonine aldolase [Am 99.3 1.3E-11 2.8E-16 120.0 8.4 187 164-379 35-240 (384)
177 TIGR01365 serC_2 phosphoserine 99.3 3.4E-11 7.3E-16 122.8 11.6 192 155-379 6-201 (374)
178 COG1103 Archaea-specific pyrid 99.3 2.2E-10 4.8E-15 110.4 16.3 202 148-379 14-234 (382)
179 PRK07337 aminotransferase; Val 99.3 4.7E-10 1E-14 113.7 19.8 205 151-379 30-249 (388)
180 PRK07777 aminotransferase; Val 99.2 6.7E-10 1.5E-14 112.6 20.8 206 152-379 25-249 (387)
181 PRK05942 aspartate aminotransf 99.2 1E-09 2.2E-14 111.7 21.6 146 221-379 100-260 (394)
182 PRK07681 aspartate aminotransf 99.2 9.6E-10 2.1E-14 112.1 21.1 203 151-379 32-256 (399)
183 PRK15400 lysine decarboxylase 99.2 5.9E-11 1.3E-15 128.9 12.9 160 201-377 199-381 (714)
184 PRK00950 histidinol-phosphate 99.2 1.3E-10 2.9E-15 116.1 14.5 196 152-379 35-240 (361)
185 PRK15399 lysine decarboxylase 99.2 8.1E-11 1.8E-15 127.9 13.6 160 201-378 199-382 (713)
186 TIGR03540 DapC_direct LL-diami 99.2 1.7E-09 3.7E-14 109.3 22.5 208 151-379 29-254 (383)
187 COG1003 GcvP Glycine cleavage 99.2 1.2E-10 2.7E-15 118.1 14.0 150 202-371 114-274 (496)
188 TIGR01265 tyr_nico_aTase tyros 99.2 1.2E-09 2.6E-14 111.6 21.4 214 138-378 18-257 (403)
189 PRK05764 aspartate aminotransf 99.2 1.5E-09 3.3E-14 109.8 21.2 205 151-379 31-255 (393)
190 COG1982 LdcC Arginine/lysine/o 99.2 9.2E-11 2E-15 123.5 12.5 163 201-378 74-247 (557)
191 PRK08363 alanine aminotransfer 99.2 1.4E-09 3.1E-14 110.7 20.9 197 152-376 31-251 (398)
192 PRK09265 aminotransferase AlaT 99.2 1.9E-09 4.1E-14 110.1 21.6 198 151-377 33-255 (404)
193 KOG1357 Serine palmitoyltransf 99.2 8.5E-11 1.8E-15 119.6 11.0 191 157-379 141-361 (519)
194 PRK08912 hypothetical protein; 99.2 1.6E-09 3.5E-14 109.8 20.2 206 152-379 27-249 (387)
195 PLN00145 tyrosine/nicotianamin 99.2 1.6E-09 3.4E-14 112.2 20.3 189 163-378 70-278 (430)
196 PRK04870 histidinol-phosphate 99.2 3.7E-10 8E-15 113.1 14.8 201 151-379 26-234 (356)
197 PRK06207 aspartate aminotransf 99.2 2.6E-09 5.7E-14 109.5 21.3 207 151-379 39-268 (405)
198 TIGR02617 tnaA_trp_ase tryptop 99.2 3E-10 6.4E-15 117.2 14.2 193 162-379 54-281 (467)
199 PLN00175 aminotransferase fami 99.2 1.6E-09 3.5E-14 111.4 19.7 206 151-379 54-276 (413)
200 PRK02731 histidinol-phosphate 99.2 3.3E-10 7.1E-15 113.7 14.2 197 151-379 32-242 (367)
201 TIGR01264 tyr_amTase_E tyrosin 99.2 2.6E-09 5.6E-14 108.9 20.7 213 139-378 16-256 (401)
202 PRK13355 bifunctional HTH-doma 99.2 1.8E-09 4E-14 114.2 20.2 197 152-377 147-368 (517)
203 PRK12462 phosphoserine aminotr 99.2 4.2E-10 9.2E-15 114.3 14.5 205 150-379 2-213 (364)
204 COG1168 MalY Bifunctional PLP- 99.2 3.9E-10 8.5E-15 113.1 14.0 225 152-398 26-271 (388)
205 PRK07505 hypothetical protein; 99.2 1.9E-09 4.2E-14 110.0 19.4 197 153-378 48-264 (402)
206 PLN02656 tyrosine transaminase 99.2 1.8E-09 3.8E-14 110.8 18.9 201 150-377 30-256 (409)
207 TIGR03537 DapC succinyldiamino 99.2 2E-09 4.4E-14 107.8 18.5 146 220-378 62-222 (350)
208 PRK07683 aminotransferase A; V 99.1 4.4E-09 9.5E-14 106.9 21.0 204 152-379 29-250 (387)
209 PRK07568 aspartate aminotransf 99.1 5.4E-09 1.2E-13 106.0 21.6 197 153-378 32-251 (397)
210 PRK03317 histidinol-phosphate 99.1 8.2E-10 1.8E-14 111.2 15.0 198 153-379 28-245 (368)
211 PRK09276 LL-diaminopimelate am 99.1 9E-09 2E-13 104.2 22.6 207 152-379 32-256 (385)
212 PLN02414 glycine dehydrogenase 99.1 9E-10 2E-14 123.8 16.5 213 138-379 89-315 (993)
213 PRK07682 hypothetical protein; 99.1 4.4E-09 9.6E-14 106.2 19.9 205 152-379 21-243 (378)
214 COG1921 SelA Selenocysteine sy 99.1 1.9E-09 4.1E-14 109.4 16.7 197 159-379 35-238 (395)
215 PTZ00433 tyrosine aminotransfe 99.1 4.8E-09 1E-13 107.6 19.7 213 135-376 19-263 (412)
216 PLN02187 rooty/superroot1 99.1 3.7E-09 8.1E-14 110.5 19.1 201 151-378 66-292 (462)
217 PRK06290 aspartate aminotransf 99.1 1.7E-08 3.6E-13 104.0 23.4 204 153-379 46-268 (410)
218 PRK03321 putative aminotransfe 99.1 9.6E-10 2.1E-14 109.8 13.8 196 153-379 24-233 (352)
219 PLN00143 tyrosine/nicotianamin 99.1 6.2E-09 1.3E-13 106.8 19.9 201 150-377 31-257 (409)
220 PRK05387 histidinol-phosphate 99.1 2.3E-09 4.9E-14 106.9 15.1 193 152-379 25-227 (353)
221 PRK00854 rocD ornithine--oxo-a 99.1 4.7E-09 1E-13 106.9 17.5 191 164-379 59-273 (401)
222 PRK08068 transaminase; Reviewe 99.1 2.2E-08 4.9E-13 101.6 21.9 207 151-379 32-257 (389)
223 PRK06836 aspartate aminotransf 99.1 1E-08 2.2E-13 104.5 19.5 147 220-379 98-261 (394)
224 COG3844 Kynureninase [Amino ac 99.1 2.9E-09 6.3E-14 105.0 14.7 194 164-378 44-244 (407)
225 PLN03026 histidinol-phosphate 99.1 5.4E-09 1.2E-13 106.3 16.9 195 152-379 53-257 (380)
226 KOG0257 Kynurenine aminotransf 99.0 1.3E-08 2.8E-13 103.2 18.7 227 131-378 11-261 (420)
227 PRK07366 succinyldiaminopimela 99.0 2.4E-08 5.3E-13 101.2 21.0 208 150-379 29-256 (388)
228 cd00610 OAT_like Acetyl ornith 99.0 5.9E-09 1.3E-13 105.8 16.5 192 163-379 53-276 (413)
229 PRK03158 histidinol-phosphate 99.0 4.3E-09 9.3E-14 105.4 15.2 196 152-379 30-239 (359)
230 PRK06107 aspartate aminotransf 99.0 1.3E-08 2.8E-13 104.0 19.0 220 138-379 20-258 (402)
231 PTZ00125 ornithine aminotransf 99.0 6.5E-09 1.4E-13 105.6 16.5 192 163-379 48-264 (400)
232 PRK06348 aspartate aminotransf 99.0 2.1E-08 4.6E-13 101.7 19.9 147 220-379 91-251 (384)
233 PF00155 Aminotran_1_2: Aminot 99.0 5.9E-09 1.3E-13 103.9 15.3 162 203-378 50-237 (363)
234 PRK08153 histidinol-phosphate 99.0 1.3E-08 2.8E-13 103.0 17.8 194 154-379 35-240 (369)
235 PRK01533 histidinol-phosphate 99.0 5E-09 1.1E-13 106.2 14.7 196 152-379 30-239 (366)
236 PRK05166 histidinol-phosphate 99.0 8E-09 1.7E-13 104.4 15.8 196 152-378 37-247 (371)
237 PRK09147 succinyldiaminopimela 99.0 2.2E-08 4.7E-13 102.0 18.9 205 151-379 29-262 (396)
238 PF03841 SelA: L-seryl-tRNA se 99.0 3.4E-10 7.3E-15 114.0 5.5 189 159-379 14-228 (367)
239 PTZ00377 alanine aminotransfer 99.0 2.3E-08 5E-13 104.8 19.5 145 220-376 140-314 (481)
240 PRK09105 putative aminotransfe 99.0 1.3E-08 2.8E-13 103.2 16.2 193 152-379 44-250 (370)
241 PRK06855 aminotransferase; Val 99.0 5.3E-08 1.2E-12 100.8 20.7 146 220-377 98-258 (433)
242 PRK14809 histidinol-phosphate 99.0 2.2E-08 4.7E-13 100.4 17.2 198 151-379 30-239 (357)
243 PRK08636 aspartate aminotransf 99.0 8.1E-08 1.8E-12 98.2 21.6 148 220-379 97-265 (403)
244 PRK08056 threonine-phosphate d 99.0 2E-08 4.4E-13 100.8 16.9 194 152-378 21-228 (356)
245 PRK08175 aminotransferase; Val 99.0 7.1E-08 1.5E-12 98.3 20.9 146 220-379 93-254 (395)
246 PRK01278 argD acetylornithine 99.0 3.7E-08 8E-13 100.1 18.4 190 164-379 49-260 (389)
247 TIGR03538 DapC_gpp succinyldia 99.0 7.2E-08 1.6E-12 98.1 20.4 206 151-379 28-261 (393)
248 PLN02376 1-aminocyclopropane-1 98.9 2.4E-08 5.1E-13 105.5 16.7 152 212-378 117-295 (496)
249 PRK05367 glycine dehydrogenase 98.9 1.6E-08 3.4E-13 114.0 15.7 151 202-379 126-287 (954)
250 PLN02231 alanine transaminase 98.9 7.2E-08 1.6E-12 102.8 19.8 206 152-376 130-366 (534)
251 PRK04073 rocD ornithine--oxo-a 98.9 5.9E-08 1.3E-12 99.1 17.6 184 164-379 58-272 (396)
252 TIGR01140 L_thr_O3P_dcar L-thr 98.9 1.2E-08 2.6E-13 101.6 12.2 150 202-379 52-211 (330)
253 PRK09148 aminotransferase; Val 98.9 2.8E-07 6E-12 94.5 22.4 206 152-379 31-255 (405)
254 PRK04781 histidinol-phosphate 98.9 1.9E-08 4E-13 101.7 13.3 162 202-379 64-237 (364)
255 PRK07590 L,L-diaminopimelate a 98.9 1.1E-07 2.4E-12 97.4 18.3 210 138-379 19-266 (409)
256 COG1167 ARO8 Transcriptional r 98.9 8.5E-08 1.8E-12 100.4 17.2 146 220-379 157-315 (459)
257 PLN02450 1-aminocyclopropane-1 98.9 9.5E-08 2.1E-12 100.2 17.4 148 220-379 113-289 (468)
258 TIGR03539 DapC_actino succinyl 98.8 1.1E-07 2.4E-12 95.6 17.1 204 139-379 9-234 (357)
259 PRK15481 transcriptional regul 98.8 6.2E-08 1.3E-12 99.9 15.1 143 220-379 143-298 (431)
260 TIGR00707 argD acetylornithine 98.8 9.8E-08 2.1E-12 96.0 16.2 190 164-379 45-255 (379)
261 TIGR01885 Orn_aminotrans ornit 98.8 2.3E-07 5.1E-12 94.8 18.9 185 164-379 55-272 (401)
262 COG4100 Cystathionine beta-lya 98.8 5.2E-08 1.1E-12 95.4 12.7 183 195-392 67-267 (416)
263 PRK02610 histidinol-phosphate 98.8 2.1E-07 4.5E-12 94.3 17.5 199 153-379 30-251 (374)
264 PRK03244 argD acetylornithine 98.8 2.5E-07 5.5E-12 94.1 17.6 186 164-379 61-268 (398)
265 PRK03967 histidinol-phosphate 98.8 1.4E-07 3.1E-12 94.2 15.4 193 153-379 20-221 (337)
266 PRK07908 hypothetical protein; 98.8 4.3E-07 9.2E-12 90.9 18.1 191 150-379 21-221 (349)
267 PRK03715 argD acetylornithine 98.8 2.5E-07 5.3E-12 95.0 16.6 148 220-379 96-264 (395)
268 PLN02607 1-aminocyclopropane-1 98.7 5.9E-07 1.3E-11 93.8 19.0 148 220-377 122-294 (447)
269 TIGR03542 DAPAT_plant LL-diami 98.7 7.4E-07 1.6E-11 91.1 19.3 199 152-379 34-263 (402)
270 KOG0259 Tyrosine aminotransfer 98.7 6.8E-07 1.5E-11 90.0 17.7 195 163-380 79-289 (447)
271 TIGR03246 arg_catab_astC succi 98.7 4.5E-07 9.7E-12 92.9 16.9 184 164-379 53-264 (397)
272 TIGR03801 asp_4_decarbox aspar 98.7 4.2E-07 9.1E-12 96.6 17.0 147 220-379 157-327 (521)
273 PRK06358 threonine-phosphate d 98.7 5.8E-07 1.3E-11 90.4 17.3 192 154-378 22-229 (354)
274 PRK07865 N-succinyldiaminopime 98.7 9.9E-07 2.1E-11 88.7 18.7 211 132-379 7-240 (364)
275 PLN02368 alanine transaminase 98.7 1.2E-06 2.7E-11 90.3 19.2 145 220-376 132-306 (407)
276 PRK08354 putative aminotransfe 98.7 7.2E-07 1.6E-11 88.1 16.6 178 153-376 10-196 (311)
277 PRK09275 aspartate aminotransf 98.7 5.7E-07 1.2E-11 95.7 16.9 147 220-379 163-328 (527)
278 PRK09257 aromatic amino acid a 98.7 7.4E-07 1.6E-11 90.8 17.2 143 222-376 98-260 (396)
279 PRK04635 histidinol-phosphate 98.7 8.1E-08 1.8E-12 96.4 9.9 157 203-379 66-231 (354)
280 COG4992 ArgD Ornithine/acetylo 98.7 5E-07 1.1E-11 92.1 15.5 211 152-392 43-280 (404)
281 PRK05839 hypothetical protein; 98.6 1.6E-06 3.4E-11 88.0 18.2 155 205-379 72-249 (374)
282 PRK07392 threonine-phosphate d 98.6 8.7E-07 1.9E-11 89.1 16.1 195 152-379 23-233 (360)
283 PRK02627 acetylornithine amino 98.6 1.1E-06 2.4E-11 89.0 16.8 190 164-379 57-267 (396)
284 PRK01688 histidinol-phosphate 98.6 1E-07 2.3E-12 95.7 8.9 158 202-379 62-230 (351)
285 PRK02936 argD acetylornithine 98.6 9.6E-07 2.1E-11 89.2 15.6 191 163-379 46-252 (377)
286 COG0001 HemL Glutamate-1-semia 98.6 2.5E-06 5.4E-11 87.9 16.9 191 164-379 71-284 (432)
287 COG0079 HisC Histidinol-phosph 98.6 1.7E-06 3.8E-11 87.8 15.7 202 153-389 24-241 (356)
288 KOG1358 Serine palmitoyltransf 98.5 6.8E-07 1.5E-11 90.2 12.1 196 153-376 95-315 (467)
289 PRK04013 argD acetylornithine/ 98.5 2.9E-06 6.3E-11 86.5 16.8 193 164-379 42-246 (364)
290 KOG0629 Glutamate decarboxylas 98.5 3.1E-07 6.8E-12 93.4 9.2 171 197-378 141-336 (510)
291 PTZ00376 aspartate aminotransf 98.5 7.5E-07 1.6E-11 91.2 12.3 141 223-375 103-264 (404)
292 PLN02624 ornithine-delta-amino 98.5 3.8E-06 8.2E-11 88.4 17.5 191 164-379 93-310 (474)
293 PRK12403 putative aminotransfe 98.5 3.1E-06 6.8E-11 88.7 16.5 85 291-378 209-307 (460)
294 PRK04260 acetylornithine amino 98.5 4.2E-06 9.1E-11 84.7 16.6 146 221-379 88-250 (375)
295 PRK05093 argD bifunctional N-s 98.5 6.2E-06 1.3E-10 84.4 17.7 153 204-379 89-269 (403)
296 KOG1383 Glutamate decarboxylas 98.5 3E-06 6.5E-11 87.2 14.9 222 137-379 64-305 (491)
297 PRK08117 4-aminobutyrate amino 98.4 7.2E-06 1.6E-10 85.0 16.8 203 163-379 60-292 (433)
298 PLN02760 4-aminobutyrate:pyruv 98.4 6.2E-06 1.3E-10 87.5 16.2 86 291-379 247-346 (504)
299 PRK12381 bifunctional succinyl 98.4 8.4E-06 1.8E-10 83.8 16.8 189 164-379 57-268 (406)
300 TIGR00713 hemL glutamate-1-sem 98.4 6.1E-06 1.3E-10 84.9 15.7 196 162-379 64-279 (423)
301 PRK11522 putrescine--2-oxoglut 98.4 5.7E-06 1.2E-10 86.8 15.1 192 163-377 99-316 (459)
302 PLN02672 methionine S-methyltr 98.4 1E-05 2.3E-10 92.0 17.5 204 152-379 698-927 (1082)
303 PRK05964 adenosylmethionine--8 98.4 6E-06 1.3E-10 85.4 14.1 168 204-379 92-286 (423)
304 COG0160 GabT 4-aminobutyrate a 98.4 2.3E-05 5E-10 81.6 18.4 213 163-394 73-319 (447)
305 PLN02397 aspartate transaminas 98.4 2.6E-06 5.7E-11 88.1 11.4 138 226-375 127-282 (423)
306 TIGR03372 putres_am_tran putre 98.4 1.4E-05 3.1E-10 83.4 16.8 193 163-379 92-310 (442)
307 PRK08637 hypothetical protein; 98.4 1E-05 2.2E-10 82.4 15.3 145 221-377 72-242 (388)
308 PRK09440 avtA valine--pyruvate 98.3 2.1E-05 4.5E-10 80.6 16.8 151 220-379 99-265 (416)
309 PF02347 GDC-P: Glycine cleava 98.3 3.4E-05 7.4E-10 80.0 18.0 211 138-379 51-278 (429)
310 PRK13360 omega amino acid--pyr 98.3 2.1E-05 4.6E-10 82.1 16.2 86 290-378 201-300 (442)
311 PRK05664 threonine-phosphate d 98.3 1.5E-05 3.3E-10 79.4 14.2 145 203-379 55-209 (330)
312 PRK09264 diaminobutyrate--2-ox 98.3 2.8E-05 6.2E-10 80.5 16.6 152 224-379 110-284 (425)
313 PRK06541 hypothetical protein; 98.3 1.7E-05 3.6E-10 83.3 15.0 84 291-376 208-305 (460)
314 PRK00062 glutamate-1-semialdeh 98.3 1.3E-05 2.9E-10 83.0 14.1 193 162-379 66-281 (426)
315 PRK14808 histidinol-phosphate 98.2 2.4E-05 5.3E-10 78.2 14.7 189 151-379 19-219 (335)
316 TIGR02407 ectoine_ectB diamino 98.2 5.3E-05 1.1E-09 78.3 17.6 146 224-379 106-280 (412)
317 PLN00144 acetylornithine trans 98.2 2.8E-05 6.1E-10 79.5 15.3 192 163-379 32-252 (382)
318 PRK00615 glutamate-1-semialdeh 98.2 4.2E-05 9.2E-10 79.7 16.8 164 204-379 100-285 (433)
319 PRK07046 aminotransferase; Val 98.2 5.3E-05 1.1E-09 79.4 17.0 164 203-379 121-301 (453)
320 PRK04612 argD acetylornithine 98.2 2.7E-05 5.8E-10 80.5 14.5 146 221-378 102-271 (408)
321 PRK06105 aminotransferase; Pro 98.2 6.9E-05 1.5E-09 78.7 17.3 88 290-379 204-304 (460)
322 PRK06062 hypothetical protein; 98.2 5.4E-05 1.2E-09 79.2 16.5 86 290-377 200-299 (451)
323 KOG2040 Glycine dehydrogenase 98.2 1.1E-05 2.3E-10 85.9 10.9 157 203-378 588-763 (1001)
324 TIGR00461 gcvP glycine dehydro 98.2 4.8E-05 1E-09 85.5 16.7 151 202-379 114-275 (939)
325 KOG0628 Aromatic-L-amino-acid/ 98.2 5.1E-06 1.1E-10 85.5 8.2 179 190-379 106-319 (511)
326 PRK06425 histidinol-phosphate 98.2 1.9E-05 4.1E-10 78.7 11.9 153 202-379 45-210 (332)
327 PRK05769 4-aminobutyrate amino 98.1 0.00011 2.4E-09 76.7 17.4 76 301-379 221-306 (441)
328 COG0403 GcvP Glycine cleavage 98.1 0.00016 3.6E-09 74.1 16.8 167 203-394 126-304 (450)
329 PLN02482 glutamate-1-semialdeh 98.1 0.00015 3.2E-09 76.6 17.1 161 204-379 146-330 (474)
330 PRK08360 4-aminobutyrate amino 98.1 0.00023 4.9E-09 74.4 18.2 194 164-379 59-289 (443)
331 PRK06058 4-aminobutyrate amino 98.0 8.8E-05 1.9E-09 77.4 14.8 84 293-379 211-304 (443)
332 PRK07480 putative aminotransfe 98.0 0.00018 4E-09 75.4 16.9 83 291-375 206-302 (456)
333 PRK09792 4-aminobutyrate trans 98.0 0.00019 4E-09 74.4 16.7 154 220-379 104-283 (421)
334 PRK07495 4-aminobutyrate amino 98.0 0.00029 6.3E-09 73.2 18.1 170 203-379 89-283 (425)
335 PRK12389 glutamate-1-semialdeh 98.0 0.00041 8.9E-09 72.1 18.5 155 204-379 100-284 (428)
336 PRK09221 beta alanine--pyruvat 98.0 0.00014 3.1E-09 76.0 14.8 88 290-379 204-304 (445)
337 PRK08593 4-aminobutyrate amino 97.9 0.00015 3.3E-09 75.7 14.1 87 291-379 193-292 (445)
338 PRK07678 aminotransferase; Val 97.9 0.0003 6.5E-09 73.7 15.6 85 292-379 201-299 (451)
339 PF05889 SLA_LP_auto_ag: Solub 97.9 2.8E-05 6.1E-10 79.3 7.4 163 206-378 65-237 (389)
340 TIGR00508 bioA adenosylmethion 97.9 0.00035 7.6E-09 72.6 15.6 196 162-379 61-294 (427)
341 PRK06082 4-aminobutyrate amino 97.9 0.00059 1.3E-08 71.7 17.2 194 163-379 88-314 (459)
342 PRK07482 hypothetical protein; 97.9 0.00031 6.7E-09 73.8 15.0 85 289-375 205-303 (461)
343 PF00202 Aminotran_3: Aminotra 97.9 0.00024 5.1E-09 71.6 13.4 189 164-379 34-262 (339)
344 PRK05965 hypothetical protein; 97.8 0.0006 1.3E-08 71.6 16.8 87 291-379 202-301 (459)
345 PRK06149 hypothetical protein; 97.8 0.00059 1.3E-08 78.0 17.8 199 164-379 601-830 (972)
346 PRK08088 4-aminobutyrate amino 97.8 0.00092 2E-08 69.2 17.9 167 205-379 92-284 (425)
347 PRK06943 adenosylmethionine--8 97.8 0.00045 9.7E-09 72.5 15.6 163 204-379 104-308 (453)
348 KOG0256 1-aminocyclopropane-1- 97.8 0.00048 1E-08 70.4 14.6 148 220-379 149-320 (471)
349 PRK07986 adenosylmethionine--8 97.8 0.00027 5.9E-09 73.6 13.3 169 204-379 93-291 (428)
350 PRK06209 glutamate-1-semialdeh 97.8 0.00063 1.4E-08 70.8 16.0 88 288-379 172-267 (431)
351 PRK06777 4-aminobutyrate amino 97.8 0.0016 3.5E-08 67.5 18.5 163 204-379 90-283 (421)
352 PRK06959 putative threonine-ph 97.8 0.00048 1E-08 69.1 13.9 149 202-379 58-215 (339)
353 PRK06173 adenosylmethionine--8 97.8 0.00047 1E-08 71.8 14.1 169 204-379 94-293 (429)
354 TIGR00709 dat 2,4-diaminobutyr 97.7 0.0013 2.7E-08 68.8 17.2 60 318-379 229-291 (442)
355 PRK05630 adenosylmethionine--8 97.7 0.00032 7E-09 72.8 12.6 85 291-379 191-287 (422)
356 PRK07481 hypothetical protein; 97.7 0.0012 2.5E-08 69.2 16.8 74 302-378 214-298 (449)
357 PRK06938 diaminobutyrate--2-ox 97.7 0.0007 1.5E-08 71.3 14.7 154 222-379 131-316 (464)
358 TIGR00700 GABAtrnsam 4-aminobu 97.7 0.0013 2.9E-08 68.0 16.3 87 290-379 182-282 (420)
359 PRK06916 adenosylmethionine--8 97.7 0.00076 1.6E-08 70.9 14.7 163 203-379 105-310 (460)
360 PRK06917 hypothetical protein; 97.7 0.0011 2.5E-08 69.3 16.0 87 290-379 185-286 (447)
361 PRK07036 hypothetical protein; 97.7 0.0013 2.9E-08 69.2 15.8 86 291-379 207-307 (466)
362 TIGR03251 LAT_fam L-lysine 6-t 97.6 0.0011 2.5E-08 68.9 15.0 85 290-378 205-299 (431)
363 PRK07030 adenosylmethionine--8 97.6 0.0012 2.7E-08 69.4 14.7 88 290-379 201-301 (466)
364 PRK07483 hypothetical protein; 97.6 0.0013 2.8E-08 68.8 14.7 87 291-379 186-286 (443)
365 PRK05639 4-aminobutyrate amino 97.6 0.0013 2.9E-08 69.0 14.8 75 302-379 223-307 (457)
366 PRK08742 adenosylmethionine--8 97.5 0.0016 3.5E-08 68.7 14.7 86 290-378 223-322 (472)
367 PRK06148 hypothetical protein; 97.5 0.004 8.8E-08 71.5 18.3 198 164-379 640-870 (1013)
368 PRK06931 diaminobutyrate--2-ox 97.5 0.0023 4.9E-08 67.3 14.8 60 318-379 248-310 (459)
369 COG1932 SerC Phosphoserine ami 97.5 0.00065 1.4E-08 68.6 10.1 200 153-379 6-215 (365)
370 TIGR00699 GABAtrns_euk 4-amino 97.5 0.0028 6.1E-08 66.8 15.4 76 289-367 237-325 (464)
371 PRK06918 4-aminobutyrate amino 97.4 0.0045 9.8E-08 64.7 16.3 59 318-379 242-304 (451)
372 COG3033 TnaA Tryptophanase [Am 97.4 0.00058 1.3E-08 68.9 8.2 192 158-379 55-283 (471)
373 KOG1401 Acetylornithine aminot 97.3 0.0026 5.6E-08 65.2 12.5 153 220-378 118-290 (433)
374 KOG1402 Ornithine aminotransfe 97.3 0.0033 7.2E-08 62.9 12.9 201 164-392 77-304 (427)
375 PRK08297 L-lysine aminotransfe 97.3 0.0056 1.2E-07 64.0 14.7 85 290-378 212-306 (443)
376 PRK12566 glycine dehydrogenase 97.1 0.0081 1.8E-07 67.9 14.9 147 203-379 130-289 (954)
377 PLN02974 adenosylmethionine-8- 96.9 0.031 6.7E-07 62.9 17.2 85 291-378 567-670 (817)
378 KOG0634 Aromatic amino acid am 96.9 0.0051 1.1E-07 63.5 9.8 112 214-339 122-247 (472)
379 COG0161 BioA Adenosylmethionin 96.9 0.0083 1.8E-07 62.7 11.6 83 290-378 200-301 (449)
380 COG3977 Alanine-alpha-ketoisov 96.3 0.1 2.2E-06 52.1 14.0 89 286-379 167-265 (417)
381 COG1448 TyrB Aspartate/tyrosin 96.2 0.098 2.1E-06 53.5 13.8 211 139-376 13-261 (396)
382 KOG0258 Alanine aminotransfera 94.9 0.47 1E-05 48.9 13.0 108 220-338 138-257 (475)
383 KOG3846 L-kynurenine hydrolase 94.9 0.06 1.3E-06 53.8 6.4 165 202-378 116-293 (465)
384 KOG0633 Histidinol phosphate a 93.6 0.33 7.1E-06 47.7 8.3 146 220-378 88-243 (375)
385 KOG1404 Alanine-glyoxylate ami 92.9 1.1 2.3E-05 46.4 11.1 57 318-379 235-297 (442)
386 KOG2790 Phosphoserine aminotra 92.5 1.3 2.8E-05 44.1 10.7 197 152-379 7-220 (370)
387 KOG1405 4-aminobutyrate aminot 91.6 0.34 7.4E-06 49.4 5.7 71 290-361 255-341 (484)
388 PLN02994 1-aminocyclopropane-1 91.0 0.62 1.3E-05 41.9 6.3 45 204-252 103-152 (153)
389 PF12897 Aminotran_MocR: Alani 89.6 7.2 0.00016 40.5 13.2 206 150-378 21-269 (425)
390 KOG3843 Predicted serine hydro 87.8 0.23 4.9E-06 48.9 1.0 88 286-376 139-237 (432)
391 KOG1403 Predicted alanine-glyo 87.1 1.5 3.3E-05 44.0 6.3 211 148-379 47-295 (452)
392 KOG1411 Aspartate aminotransfe 84.5 9.5 0.00021 39.1 10.5 218 139-379 39-292 (427)
393 KOG2040 Glycine dehydrogenase 81.6 5.9 0.00013 43.6 8.2 150 204-379 170-328 (1001)
394 KOG1412 Aspartate aminotransfe 77.9 15 0.00033 37.2 9.2 144 220-374 102-265 (410)
395 PF02310 B12-binding: B12 bind 73.4 13 0.00029 30.8 6.7 63 273-340 28-92 (121)
396 cd02067 B12-binding B12 bindin 65.5 25 0.00054 29.4 6.7 63 272-339 26-91 (119)
397 PRK13396 3-deoxy-7-phosphohept 64.9 14 0.00031 37.8 6.0 58 285-342 215-284 (352)
398 PRK12595 bifunctional 3-deoxy- 63.5 16 0.00036 37.4 6.1 57 285-341 232-299 (360)
399 TIGR01361 DAHP_synth_Bsub phos 61.6 22 0.00048 34.7 6.4 57 285-341 139-206 (260)
400 PRK13397 3-deoxy-7-phosphohept 60.5 21 0.00045 34.9 5.9 58 285-342 129-197 (250)
401 PRK02261 methylaspartate mutas 58.9 32 0.0007 30.2 6.4 60 272-336 30-92 (137)
402 PRK00945 acetyl-CoA decarbonyl 58.7 46 0.00099 30.7 7.6 64 286-349 20-83 (171)
403 cd02072 Glm_B12_BD B12 binding 56.1 29 0.00063 30.4 5.6 60 272-336 26-88 (128)
404 TIGR02370 pyl_corrinoid methyl 55.5 34 0.00073 31.9 6.3 61 272-337 111-175 (197)
405 COG1504 Uncharacterized conser 54.8 28 0.00062 29.9 5.0 49 286-335 47-95 (121)
406 COG2877 KdsA 3-deoxy-D-manno-o 52.9 27 0.00058 34.1 5.1 41 300-341 158-202 (279)
407 TIGR01501 MthylAspMutase methy 51.7 36 0.00078 30.1 5.5 55 271-330 27-81 (134)
408 cd05126 Mth938 Mth938 domain. 51.1 37 0.0008 29.2 5.3 52 287-339 45-96 (117)
409 TIGR01362 KDO8P_synth 3-deoxy- 50.4 34 0.00074 33.6 5.6 54 286-340 125-186 (258)
410 cd02065 B12-binding_like B12 b 49.4 55 0.0012 27.1 6.2 64 273-341 27-92 (125)
411 cd02070 corrinoid_protein_B12- 49.1 49 0.0011 30.7 6.3 61 272-337 109-173 (201)
412 cd02071 MM_CoA_mut_B12_BD meth 47.9 53 0.0012 27.9 5.9 60 272-336 26-88 (122)
413 COG1105 FruK Fructose-1-phosph 45.1 79 0.0017 31.9 7.4 60 281-340 104-170 (310)
414 PRK13398 3-deoxy-7-phosphohept 45.1 43 0.00094 32.9 5.5 57 285-341 141-208 (266)
415 cd02069 methionine_synthase_B1 44.9 57 0.0012 30.8 6.1 61 271-336 114-176 (213)
416 PF00128 Alpha-amylase: Alpha 44.3 18 0.0004 34.3 2.7 28 310-337 46-73 (316)
417 COG2870 RfaE ADP-heptose synth 43.1 64 0.0014 33.9 6.5 34 303-336 145-178 (467)
418 TIGR03275 methan_mark_8 putati 41.5 8.9 0.00019 37.3 0.1 83 281-368 142-225 (259)
419 PRK12457 2-dehydro-3-deoxyphos 41.2 65 0.0014 32.1 5.9 55 286-340 139-202 (281)
420 KOG0630 Predicted pyridoxal-de 41.1 49 0.0011 35.6 5.3 92 286-378 272-375 (838)
421 smart00642 Aamy Alpha-amylase 40.7 26 0.00056 31.8 3.0 27 311-337 65-91 (166)
422 PRK05198 2-dehydro-3-deoxyphos 39.6 61 0.0013 32.0 5.4 54 286-340 133-194 (264)
423 TIGR02026 BchE magnesium-proto 39.4 65 0.0014 34.3 6.2 56 285-341 47-104 (497)
424 PLN03033 2-dehydro-3-deoxyphos 37.4 72 0.0016 31.8 5.6 54 285-339 138-199 (290)
425 PRK09441 cytoplasmic alpha-amy 37.2 29 0.00062 36.7 3.1 28 310-337 75-102 (479)
426 PF13378 MR_MLE_C: Enolase C-t 36.8 55 0.0012 26.9 4.2 51 287-337 4-54 (111)
427 PRK08057 cobalt-precorrin-6x r 36.1 69 0.0015 31.1 5.3 25 317-341 53-77 (248)
428 PF04131 NanE: Putative N-acet 36.0 1.2E+02 0.0025 28.6 6.5 72 288-365 52-123 (192)
429 COG3010 NanE Putative N-acetyl 34.9 89 0.0019 30.0 5.5 71 289-365 87-158 (229)
430 cd00984 DnaB_C DnaB helicase C 34.9 87 0.0019 29.2 5.7 49 286-334 104-168 (242)
431 cd05560 Xcc1710_like Xcc1710_l 34.7 1.3E+02 0.0027 25.4 6.1 50 286-337 38-87 (109)
432 COG0373 HemA Glutamyl-tRNA red 33.5 4.2E+02 0.0091 27.9 10.8 109 200-337 163-274 (414)
433 PF02571 CbiJ: Precorrin-6x re 32.3 45 0.00098 32.4 3.3 46 286-333 50-97 (249)
434 COG2099 CobK Precorrin-6x redu 32.1 92 0.002 30.6 5.3 26 315-340 52-77 (257)
435 TIGR00640 acid_CoA_mut_C methy 31.8 1.3E+02 0.0029 26.1 5.9 58 272-334 29-89 (132)
436 COG2876 AroA 3-deoxy-D-arabino 31.5 1.1E+02 0.0023 30.4 5.7 65 297-364 176-252 (286)
437 COG1091 RfbD dTDP-4-dehydrorha 31.1 94 0.002 30.9 5.4 48 287-334 36-97 (281)
438 PRK08673 3-deoxy-7-phosphohept 29.7 1.2E+02 0.0026 31.0 5.9 58 285-342 207-275 (335)
439 PF09872 DUF2099: Uncharacteri 29.2 13 0.00028 36.2 -1.0 83 281-368 142-225 (258)
440 cd00248 Mth938-like Mth938-lik 28.8 1.5E+02 0.0033 24.9 5.6 52 286-338 37-88 (109)
441 smart00481 POLIIIAc DNA polyme 28.3 2.4E+02 0.0052 20.8 6.2 46 286-334 13-59 (67)
442 TIGR03586 PseI pseudaminic aci 28.0 1.5E+02 0.0032 30.2 6.2 83 285-371 141-234 (327)
443 cd03315 MLE_like Muconate lact 27.2 1.3E+02 0.0029 28.8 5.6 51 286-336 188-238 (265)
444 PF14639 YqgF: Holliday-juncti 27.0 60 0.0013 29.1 2.9 43 287-329 49-91 (150)
445 PF01248 Ribosomal_L7Ae: Ribos 24.3 2E+02 0.0043 23.0 5.3 51 290-342 20-72 (95)
446 PLN00196 alpha-amylase; Provis 23.1 69 0.0015 33.7 3.0 28 310-337 86-113 (428)
447 PRK10785 maltodextrin glucosid 22.7 69 0.0015 35.1 3.0 27 311-337 221-247 (598)
448 cd03319 L-Ala-DL-Glu_epimerase 22.6 1.7E+02 0.0036 28.9 5.5 51 286-336 236-286 (316)
449 COG0296 GlgB 1,4-alpha-glucan 22.6 89 0.0019 34.6 3.8 32 306-337 204-235 (628)
450 PF02603 Hpr_kinase_N: HPr Ser 21.9 1.3E+02 0.0029 25.8 4.1 40 292-336 73-112 (127)
451 cd05565 PTS_IIB_lactose PTS_II 21.5 1.4E+02 0.003 24.9 3.9 43 315-363 14-56 (99)
452 PRK13601 putative L7Ae-like ri 21.4 2.2E+02 0.0048 22.9 4.9 45 291-337 14-58 (82)
453 PRK12313 glycogen branching en 21.2 81 0.0017 34.7 3.1 27 311-337 215-241 (633)
454 PRK13602 putative ribosomal pr 20.8 2.1E+02 0.0045 22.9 4.7 45 290-336 16-60 (82)
455 PRK10933 trehalose-6-phosphate 20.8 83 0.0018 34.1 3.1 27 311-337 76-102 (551)
456 TIGR01306 GMP_reduct_2 guanosi 20.2 1.6E+02 0.0035 29.9 4.8 6 355-360 159-164 (321)
No 1
>PLN02271 serine hydroxymethyltransferase
Probab=100.00 E-value=1.3e-85 Score=683.74 Aligned_cols=387 Identities=77% Similarity=1.227 Sum_probs=351.0
Q ss_pred CCccccCCcceeeccCCCCCCCCCCCCCcccCCcceeecccCCCCCCCCCCCCCcccchhhhhhccCCCCCCcCCCcccc
Q 015609 3 LSSHTQSGLSLSFHSTNSSPPSPTPPKTMIADDSISLQIDSSYCHSPNPMPSKPLQLLEERTEKLHSGNNDERVDKDDEQ 82 (403)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (403)
||+.+||+||||||++.++.| .+||||||+||||+|||.+++|+||+|||||+|+.|+....-....+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (586)
T PLN02271 1 LSRIAQSDLSLGFHSHPSPSP------APIADDSITLQIDSSFRSSSNPMPPIPLQLLEQKEEKEEDAGEEGDEDEEEQG 74 (586)
T ss_pred CCcccccCccceeccCCCCCC------CcccccchheeccccccccCCCCCCCcchhcccchhhhhhhcccccccccccc
Confidence 678899999999988877433 78999999999999999999999999999999999985422222346677788
Q ss_pred cceEEEEcCCcceeccccCCCCCCcc-----cccccccchhhhhhhhhhhcCCCCCCCChHHHHHHHHHHHhhhccccee
Q 015609 83 EEVEFSILGHPMCLKRQRDCQSLPFT-----KRFAVEPGLESRRAGVRAWGNQSLPLADPEIFDIMEKEKQRQFKGIELI 157 (403)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ei~~li~~e~~rq~~~l~Li 157 (403)
++++|++|+|+||+||+|.+....++ ++..+++.+++|+..++.|++++|++.||||+++|++|+.||+++|+||
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Dpei~~li~~E~~rQ~~~l~LI 154 (586)
T PLN02271 75 EDEHFSILGHPMCLKRPRDGDSSSSSSSSSSKRAAVDSGLESRRAAVRAWGNQPLPEADPDIHELMEKEKQRQFKGIELI 154 (586)
T ss_pred CccCchhhhhhhhhcccccccccccccccccccccccccchhHHHHHHHHHhccHhhhCHHHHHHHHHHHHHHhcCeeec
Confidence 88999999999999999877643322 2345567899999999999999999999999999999999999999999
Q ss_pred ccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh
Q 015609 158 ASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL 237 (403)
Q Consensus 158 aSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al 237 (403)
||||++|++|++++++.|+|+|+||+||.|||+|+++++++|.+|++|++++||+++++||+||++.||+.||.+++.++
T Consensus 155 ASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~AL 234 (586)
T PLN02271 155 ASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGL 234 (586)
T ss_pred cccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCcccc
Q 015609 238 LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWD 317 (403)
Q Consensus 238 l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~D 317 (403)
++|||+||+++++||||++|+++.+.+++++..|.+|++++|++|++++.|||+++++++..++||||+++.++|++.+|
T Consensus 235 l~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Saypr~~D 314 (586)
T PLN02271 235 LLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYPREWD 314 (586)
T ss_pred cCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhccCcCC
Confidence 99999999999999999999987655556777888899999999888999999999998878899999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCceEEEEEeCC------------------
Q 015609 318 YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIFFRRG------------------ 379 (403)
Q Consensus 318 i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~GG~I~~~~~------------------ 379 (403)
+++|++||+++|++|++|+||++|+++.+.+++|+.+||++++|+||||+||+||+|+++++
T Consensus 315 ~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLrGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~ 394 (586)
T PLN02271 315 YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRGPRGGIIFYRKGPKLRKQGMLLSHGDDNSH 394 (586)
T ss_pred HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCCCCCceEEEecccccccccCCcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999863
Q ss_pred ----CCCcccCCCcccCCcc
Q 015609 380 ----KKPRKQGIPLNHGDVV 395 (403)
Q Consensus 380 ----~~~~~~~~p~~qGg~~ 395 (403)
++++..+||+.|||.-
T Consensus 395 ~d~~~kI~~aVfPglqgGph 414 (586)
T PLN02271 395 YDFEEKINFAVFPSLQGGPH 414 (586)
T ss_pred HHHHHHhhcccCCccccChh
Confidence 2356677899998864
No 2
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.8e-70 Score=532.25 Aligned_cols=283 Identities=67% Similarity=1.060 Sum_probs=269.3
Q ss_pred chhhhhhhhhhhcCCCCCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHH
Q 015609 116 GLESRRAGVRAWGNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYI 195 (403)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~ 195 (403)
.++.++..+..|.+.+|.+.||||++||++|+.||+++|+|||||||++.+|++|++++|+|+|+||+||.|||+|++++
T Consensus 5 ~~~~~~~~~~~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~I 84 (477)
T KOG2467|consen 5 RMESLDAAVIKLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYI 84 (477)
T ss_pred cccchhhhhhhhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHH
Confidence 44556777889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceE
Q 015609 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFE 275 (403)
Q Consensus 196 ~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~ 275 (403)
|++|.+|++|+.++|+++++.||||||+.||+.||++++.++++|+|+||.+++++|||++|||+++. ++++..+.+|+
T Consensus 85 D~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~-kkISa~SiyFe 163 (477)
T KOG2467|consen 85 DQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPT-KKISATSIYFE 163 (477)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCC-ceeeeeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999987 88888889999
Q ss_pred EeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcc
Q 015609 276 SFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYC 355 (403)
Q Consensus 276 vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~a 355 (403)
.+||.||+.+|.||||.||+.+..++||+||++.|.|++.+|++++++||+++||+|++|+||++|++++++.++||++|
T Consensus 164 SmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~ 243 (477)
T KOG2467|consen 164 SMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYC 243 (477)
T ss_pred cCceeeCCCCCceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCcCCCcCCceEEEEEeCCC-----------------CCcccCCCcccCCcceeee
Q 015609 356 DIVTSTTHKSLRGPRGGIIFFRRGK-----------------KPRKQGIPLNHGDVVVIMI 399 (403)
Q Consensus 356 Divt~StHKtL~GP~GG~I~~~~~~-----------------~~~~~~~p~~qGg~~~~s~ 399 (403)
||||+||||+|+||+||+|+++++. ++.-.+||+.|||.-.+.|
T Consensus 244 DiVTTTTHKsLRGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtI 304 (477)
T KOG2467|consen 244 DIVTTTTHKSLRGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTI 304 (477)
T ss_pred ceeeccccccccCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchH
Confidence 9999999999999999999999842 3455789999999765543
No 3
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.5e-66 Score=510.43 Aligned_cols=256 Identities=53% Similarity=0.844 Sum_probs=246.9
Q ss_pred CCCCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHH
Q 015609 130 QSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKA 209 (403)
Q Consensus 130 ~~l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~l 209 (403)
.+|...||+|+++|++|..||+..|+||||||++|++|++|+++.|+|+|+||+||.|||+||+++|++|.+|.+|+++|
T Consensus 5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCC
Q 015609 210 FDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYID 289 (403)
Q Consensus 210 fg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID 289 (403)
||+++ +||||+||++||.+++.+|++|||+||.+++.||||++|++ ++++.|.+|++++|++|++++.||
T Consensus 85 Fga~~----anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~------~v~~sG~~~~~v~Y~vd~et~~ID 154 (413)
T COG0112 85 FGAEY----ANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS------PVNFSGKLFNVVSYGVDPETGLID 154 (413)
T ss_pred hCCCc----cccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC------CCCccceeEEeEecccccccCccC
Confidence 99998 69999999999999999999999999999999999999983 578889999999999999999999
Q ss_pred HHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCC
Q 015609 290 YEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP 369 (403)
Q Consensus 290 ~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP 369 (403)
||++++++++++||+||++.|.|++.+|++++++||+++|++|++|+||.+|||++|++++|+.+||+||+||||||+||
T Consensus 155 yD~~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGP 234 (413)
T COG0112 155 YDEVEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGP 234 (413)
T ss_pred HHHHHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEeCC---CCCcccCCCcccCCcc
Q 015609 370 RGGIIFFRRG---KKPRKQGIPLNHGDVV 395 (403)
Q Consensus 370 ~GG~I~~~~~---~~~~~~~~p~~qGg~~ 395 (403)
|||+|+++++ +++++.+||+.|||--
T Consensus 235 rGG~Il~~~eel~kkin~aVFPg~qggpl 263 (413)
T COG0112 235 RGGIILTNDEELAKKINSAVFPGLQGGPL 263 (413)
T ss_pred CceEEEeccHHHHHHhhhhcCCccCCChH
Confidence 9999999984 5788899999999864
No 4
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=100.00 E-value=5.6e-61 Score=486.85 Aligned_cols=263 Identities=54% Similarity=0.913 Sum_probs=216.3
Q ss_pred CCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC
Q 015609 132 LPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD 211 (403)
Q Consensus 132 l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg 211 (403)
|++.||||+++|++|++||+++|+||||||++||.|++++++.|.|+|++|+||.|||.|+++++++|.+|+++++++||
T Consensus 1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~ 80 (399)
T PF00464_consen 1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG 80 (399)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHH
Q 015609 212 LDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYE 291 (403)
Q Consensus 212 ~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d 291 (403)
+++++|+++|++.||+.||.+++.+|++|||+||.+++.+|||++|++.... +++...+.+|++++|++|++++.||++
T Consensus 81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~-~~~~~~~~~~~~~~y~~d~~~~~ID~d 159 (399)
T PF00464_consen 81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNF-KKISASGLYFESVPYPVDPDTGLIDYD 159 (399)
T ss_dssp -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSH-SBSSHHHHHSEEEEEEB-TTTSSB-HH
T ss_pred CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccc-cccccccceEEEEeeeeecCCCeECHH
Confidence 9999999999999999999999999999999999999999999999975422 334457778999999999989999999
Q ss_pred HHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce
Q 015609 292 KLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG 371 (403)
Q Consensus 292 ~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G 371 (403)
++++++++++||||+++.|+|++.+|+++|++||+++|++|++|+||.+|+|++|.+++||++||+|++||||+|+||+|
T Consensus 160 ~l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrg 239 (399)
T PF00464_consen 160 ELEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRG 239 (399)
T ss_dssp HHHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-
T ss_pred HHHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEe-------------CC---CCCcccCCCcccCCcc
Q 015609 372 GIIFFR-------------RG---KKPRKQGIPLNHGDVV 395 (403)
Q Consensus 372 G~I~~~-------------~~---~~~~~~~~p~~qGg~~ 395 (403)
|+|+++ +. +++++.+||+.|||--
T Consensus 240 giI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h 279 (399)
T PF00464_consen 240 GIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPH 279 (399)
T ss_dssp EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--
T ss_pred eEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcc
Confidence 999999 11 4578889999998754
No 5
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=8.5e-51 Score=420.92 Aligned_cols=255 Identities=40% Similarity=0.700 Sum_probs=233.0
Q ss_pred CCCCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHH
Q 015609 130 QSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKA 209 (403)
Q Consensus 130 ~~l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~l 209 (403)
..|++.||||+++|++|..||+++|+||||||++|+.|++++++.|+++|+||+||.|||+|+++++++|.+|.++++++
T Consensus 28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l 107 (493)
T PRK13580 28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL 107 (493)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceEEeCChHHHHHHHHhhhccC-------------------------------CCeEEecCCCCCcccccc
Q 015609 210 FDLDSDNWGVNVQPYSCTSANFAVYTGLLLP-------------------------------GDRIMGLDSPSGGHLSHG 258 (403)
Q Consensus 210 fg~~~~~~~v~V~~~SGT~An~aal~all~p-------------------------------GD~VL~~~~ehgghlsh~ 258 (403)
||+++ +||++.||+.||.+++.++++| ||+||.+++.+|||++|+
T Consensus 108 f~a~~----anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg 183 (493)
T PRK13580 108 FGAEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG 183 (493)
T ss_pred hCCCc----ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC
Confidence 99998 6999999999999999999987 899999999999999998
Q ss_pred ccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccc
Q 015609 259 YHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAH 338 (403)
Q Consensus 259 ~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh 338 (403)
+ +.++.+..+.+++|+++++++.+|++++++++++.+|++++++.++|++.+|+++|++||+++|++|++|+||
T Consensus 184 ~------~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH 257 (493)
T PRK13580 184 F------RPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAH 257 (493)
T ss_pred c------ccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECch
Confidence 4 3466777788999999988899999999999998888999999999999999999999999999999999999
Q ss_pred ccccccccccc---CCCCcccEEEEcCcCCCcCCceEEEEEeCC--CCCcccCCCcccCCcc
Q 015609 339 ISGLIAAKELA---SPFDYCDIVTSTTHKSLRGPRGGIIFFRRG--KKPRKQGIPLNHGDVV 395 (403)
Q Consensus 339 ~~Glia~g~~~---~p~~~aDivt~StHKtL~GP~GG~I~~~~~--~~~~~~~~p~~qGg~~ 395 (403)
++|+++.+..+ +++.++||+++|+||+|+||+||+|++++. +.+... .|+.+|+.-
T Consensus 258 ~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~~l~~~L~~a-~P~i~gg~l 318 (493)
T PRK13580 258 FAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKKEYADAVDKG-CPLVLGGPL 318 (493)
T ss_pred hhceeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecHHHHHHHhhC-CCcccCCCc
Confidence 99999876654 566689999999999999999999999875 223333 477887643
No 6
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=3e-50 Score=419.35 Aligned_cols=254 Identities=72% Similarity=1.235 Sum_probs=233.9
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHH
Q 015609 125 RAWGNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFE 204 (403)
Q Consensus 125 ~~~~~~~l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~are 204 (403)
..|....|++.||||+++|++|.+||+++|+||||||++|+.|++++++.++++|++|+||+|||+|++.++++|++|++
T Consensus 8 ~~~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~ 87 (475)
T PLN03226 8 PKWGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQK 87 (475)
T ss_pred hhcchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHH
Confidence 35666779899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC
Q 015609 205 RALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ 284 (403)
Q Consensus 205 rla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~ 284 (403)
+++++|+++++.|.++++++||+.||.+++.++++|||+||+++..+|||++|++... +..++..+..++.++|.++++
T Consensus 88 ~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~-g~~~s~~~~~~~~~~y~~~~~ 166 (475)
T PLN03226 88 RALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTD-GKKISATSIYFESMPYRLDES 166 (475)
T ss_pred HHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhc-ccccccceEEEEeeeeeecCC
Confidence 9999999999889889999999999999999999999999999999999999987542 223344455567778999888
Q ss_pred CCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcC
Q 015609 285 TGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHK 364 (403)
Q Consensus 285 ~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHK 364 (403)
++.||+++|++++.+++||+|+++.++|++..|+++|++||+++|++|++|+||++|+++.+..++|++++|++++|+||
T Consensus 167 ~g~iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK 246 (475)
T PLN03226 167 TGLIDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHK 246 (475)
T ss_pred CCCcCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcc
Confidence 89999999999998778999888888999999999999999999999999999999999988888888899999999999
Q ss_pred CCcCCceEEEEEeCC
Q 015609 365 SLRGPRGGIIFFRRG 379 (403)
Q Consensus 365 tL~GP~GG~I~~~~~ 379 (403)
||+||+||+|+++++
T Consensus 247 ~L~GP~Gg~I~~~~~ 261 (475)
T PLN03226 247 SLRGPRGGMIFFRKG 261 (475)
T ss_pred cccCCCceEEEEchh
Confidence 999999999999764
No 7
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=4.3e-45 Score=378.27 Aligned_cols=264 Identities=63% Similarity=1.047 Sum_probs=229.7
Q ss_pred CCCCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHH
Q 015609 130 QSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKA 209 (403)
Q Consensus 130 ~~l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~l 209 (403)
..|+++||||+++|.+|.+||+++|+|+||||++||.|++++.+.+.++|++|+|+++|+.|++..+.+|+.||++++++
T Consensus 13 ~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~l 92 (452)
T PTZ00094 13 QSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEA 92 (452)
T ss_pred hhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 34888999999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred cCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCC
Q 015609 210 FDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYID 289 (403)
Q Consensus 210 fg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID 289 (403)
||+++++|.++++++|||+||++++.+++++||+|+++..+|++|++++..... ..+...+..+++.+|++++ +|.+|
T Consensus 93 f~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~-~~~~~~~~~~~~~~~~~~~-~g~id 170 (452)
T PTZ00094 93 FGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAK-KKVSATSIYFESLPYQVNE-KGLID 170 (452)
T ss_pred hCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccc-cccccceeeeeeeecccCC-CCCcC
Confidence 999988777788889999999999999999999999999999999987642210 1122234456677788876 48999
Q ss_pred HHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCC
Q 015609 290 YEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP 369 (403)
Q Consensus 290 ~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP 369 (403)
+++|++++++.+|++|+++.+++|+.+|+++|++||+++|++|++|++|++|+++.+..+.++.++|++++|+||||+||
T Consensus 171 ~~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP 250 (452)
T PTZ00094 171 YDKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGP 250 (452)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCC
Confidence 99999999776789988877889999999999999999999999999999999988877777778999999999999999
Q ss_pred ceEEEEEeCCC------CCcccCCCcccCCcc
Q 015609 370 RGGIIFFRRGK------KPRKQGIPLNHGDVV 395 (403)
Q Consensus 370 ~GG~I~~~~~~------~~~~~~~p~~qGg~~ 395 (403)
+||+++++++. .+.+.++|..+|+..
T Consensus 251 ~Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~ 282 (452)
T PTZ00094 251 RSGLIFYRKKVKPDIENKINEAVFPGLQGGPH 282 (452)
T ss_pred CceEEEEecccchHHHHhhccccCCCCCCCch
Confidence 99999997642 123356777766544
No 8
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=3.3e-40 Score=338.75 Aligned_cols=256 Identities=51% Similarity=0.815 Sum_probs=221.1
Q ss_pred hcCCCCCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHH
Q 015609 127 WGNQSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERA 206 (403)
Q Consensus 127 ~~~~~l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerl 206 (403)
++.++|++.||||+++|++|..||++.|+|+|||||++|+|++++.+.+.++|+.|++|+|++.|++.++++|++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~l 83 (416)
T PRK13034 4 FFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERA 83 (416)
T ss_pred hhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999988999999999999999999999999899999
Q ss_pred HHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCC
Q 015609 207 LKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTG 286 (403)
Q Consensus 207 a~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g 286 (403)
+++||.++ +.+++.|||.||.+++.++++|||+|++....|++++.++. .....+..+....+++++.++
T Consensus 84 a~l~g~~~----alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~ 153 (416)
T PRK13034 84 KQLFGCDY----ANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGA------KVSLSGKWYNAVQYGVDRLTG 153 (416)
T ss_pred HHHhCCCc----eEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCC------cceeccceeeeEEcccccccC
Confidence 99999987 45667899999999999999999999999999988766552 122233334445777776678
Q ss_pred CCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCC
Q 015609 287 YIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL 366 (403)
Q Consensus 287 ~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL 366 (403)
.+|+++++++++..++|+|+++.+.||+..|+++|.++|+++|++|++|+||++|.++.|....++.++|++++|+||+|
T Consensus 154 ~~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l 233 (416)
T PRK13034 154 LIDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTL 233 (416)
T ss_pred CcCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccC
Confidence 89999999998766789998877789999999999999999999999999999999988776667667999999999999
Q ss_pred cCCceEEEEEeCCC---CCcccCCCcccC
Q 015609 367 RGPRGGIIFFRRGK---KPRKQGIPLNHG 392 (403)
Q Consensus 367 ~GP~GG~I~~~~~~---~~~~~~~p~~qG 392 (403)
.||.||+|+++++. .++..+++++++
T Consensus 234 ~g~~GG~v~~~~~~~~~~~~~~~~~~~~~ 262 (416)
T PRK13034 234 RGPRGGMILTNDEEIAKKINSAVFPGLQG 262 (416)
T ss_pred CCCCCeEEEECcHHHHHHHHhhcCCcccC
Confidence 99999999987653 233345555443
No 9
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=3.5e-34 Score=292.17 Aligned_cols=240 Identities=53% Similarity=0.847 Sum_probs=207.1
Q ss_pred CCCCCCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHH
Q 015609 130 QSLPLADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKA 209 (403)
Q Consensus 130 ~~l~~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~l 209 (403)
..|++.|||++++|+++.+++++.|+|++++|++++.|++++..++.++|..|+++++++.|.+..+++|+.+++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~ 83 (416)
T PRK00011 4 DNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKEL 83 (416)
T ss_pred hhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999998888888889999999999999999999899999999
Q ss_pred cCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCC
Q 015609 210 FDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYID 289 (403)
Q Consensus 210 fg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID 289 (403)
+|++.. .|+++|||+|+.+++.++++|||+|+++.++|+++++++.. ....+.+.+++.++++++++.+|
T Consensus 84 ~g~~~~----~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~~~~~~~~~d 153 (416)
T PRK00011 84 FGAEYA----NVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSP------VNFSGKLYNVVSYGVDEETGLID 153 (416)
T ss_pred hCCCce----eeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccc------cccccceeeEeecCcCcccCCcC
Confidence 999873 57778999999999999999999999999999887765421 12223345666777765568899
Q ss_pred HHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCC
Q 015609 290 YEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP 369 (403)
Q Consensus 290 ~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP 369 (403)
++++++++++.+|++|++..+++|...|+++|.++|+++|+++++|+||++|++..+..+.++.++|++++|+||+|.||
T Consensus 154 ~~~l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g~ 233 (416)
T PRK00011 154 YDEVEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRGP 233 (416)
T ss_pred HHHHHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCCC
Confidence 99999999766789988877788988899999999999999999999999998765544555557899999999999999
Q ss_pred ceEEEEEeCC
Q 015609 370 RGGIIFFRRG 379 (403)
Q Consensus 370 ~GG~I~~~~~ 379 (403)
+||+++++++
T Consensus 234 ~gg~i~~~~~ 243 (416)
T PRK00011 234 RGGLILTNDE 243 (416)
T ss_pred CceEEEeCCH
Confidence 9999999753
No 10
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=1.1e-33 Score=286.38 Aligned_cols=238 Identities=57% Similarity=0.970 Sum_probs=203.6
Q ss_pred CCChHHHHHHHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC
Q 015609 134 LADPEIFDIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD 213 (403)
Q Consensus 134 ~~d~ei~~li~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~ 213 (403)
++|+|++++|.+|.++|+++|+|+|++|+++|.|++++..++..+|+.|+++++++.|.+..+++|+.++++++++||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~ 81 (402)
T cd00378 2 DVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE 81 (402)
T ss_pred CcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 57999999999999999999999999999999999999988888899999999999999999999988899999999998
Q ss_pred CCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHH
Q 015609 214 SDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKL 293 (403)
Q Consensus 214 ~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~L 293 (403)
. ..|+++|||+|+.+++.++++|||+|++....|+++++++... .+...|..+..++++.+++++.+|++++
T Consensus 82 ~----~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~id~~~l 153 (402)
T cd00378 82 Y----ANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFT----KVSASGKLFESVPYGVDPETGLIDYDAL 153 (402)
T ss_pred c----eeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccc----cccccceeEEEecCCcCcccCCcCHHHH
Confidence 6 3577788999999999999999999999999999887765321 1233343344455555433688999999
Q ss_pred HHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCceEE
Q 015609 294 EEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGI 373 (403)
Q Consensus 294 e~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~GG~ 373 (403)
++++.+.++++|++..+++|...|+++|.++|+++|+++++|++|+.|++..+..+.++..+|++++|+||+|.||+||+
T Consensus 154 ~~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~ 233 (402)
T cd00378 154 EKMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGL 233 (402)
T ss_pred HHHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceE
Confidence 99997667999988777889888999999999999999999999999987655444455568999999999999999999
Q ss_pred EEEeCC
Q 015609 374 IFFRRG 379 (403)
Q Consensus 374 I~~~~~ 379 (403)
++++++
T Consensus 234 i~~~~~ 239 (402)
T cd00378 234 ILTRKG 239 (402)
T ss_pred EEeccH
Confidence 999773
No 11
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.96 E-value=1.9e-28 Score=246.32 Aligned_cols=214 Identities=21% Similarity=0.220 Sum_probs=175.7
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC-hHHHHHHHHh
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYS-CTSANFAVYT 235 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~S-GT~An~aal~ 235 (403)
.++++++.|+|+++|..++...| |||.+-|..|.+....+|+ ||+++++++|+++. .|+||| ||++|++++.
T Consensus 7 ~~ATTp~~~~v~~~m~~~~~~~f--gNPsS~H~~G~~A~~~ve~-AR~~iA~llga~~~----eIiFTSG~TEsnNlaI~ 79 (386)
T COG1104 7 NAATTPVDPEVLEAMLPYLTEVF--GNPSSLHSFGREARKAVEE-AREQIAKLLGADPE----EIIFTSGATESNNLAIK 79 (386)
T ss_pred ccccCCCCHHHHHHHHHHHHhhc--CCccchhHhHHHHHHHHHH-HHHHHHHHhCCCCC----eEEEecCCcHHHHHHHH
Confidence 35689999999999999998876 8999988889998888886 89999999999985 566665 7999999998
Q ss_pred hh--cc----CCCeEEecCCCCCccccccccCCccchhhhc-ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe
Q 015609 236 GL--LL----PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA-SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308 (403)
Q Consensus 236 al--l~----pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~-g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~ 308 (403)
+. .. .|.+|+++..||.+.+. .+... ..+|++.+++|+. +|.||+++|++++++ ++.||.+.
T Consensus 80 g~~~a~~~~~~~~HIIts~iEH~aVl~---------~~~~Le~~g~~Vtyl~V~~-~G~v~~e~L~~al~~-~T~LVSim 148 (386)
T COG1104 80 GAALAYRNAQKGKHIITSAIEHPAVLN---------TCRYLERQGFEVTYLPVDS-NGLVDLEQLEEALRP-DTILVSIM 148 (386)
T ss_pred hhHHhhhcccCCCeEEEcccccHHHHH---------HHHHHHhcCCeEEEeCCCC-CCeEcHHHHHHhcCC-CceEEEEE
Confidence 84 22 47799999999866652 23333 2357888888985 899999999999985 46676554
Q ss_pred C--CCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCCCCCccc
Q 015609 309 G--SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRGKKPRKQ 385 (403)
Q Consensus 309 ~--s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~~~~~~~ 385 (403)
. +..|.++|+++|.+||+++|++||+|++|++|.++.+.... .+|++++|.|| |+||+| |+++.++..++.++
T Consensus 149 ~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~---~vD~ls~SaHK-~~GpkGiGaLyv~~~~~~~p~ 224 (386)
T COG1104 149 HANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEEL---GVDLLSFSAHK-FGGPKGIGALYVRPGVRLEPL 224 (386)
T ss_pred ecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceecccccc---CcceEEeehhh-ccCCCceEEEEECCCCccCce
Confidence 3 34799999999999999999999999999999986432211 39999999999 899999 99999888888777
Q ss_pred CCCcccC
Q 015609 386 GIPLNHG 392 (403)
Q Consensus 386 ~~p~~qG 392 (403)
+.+|.|=
T Consensus 225 i~GGgQE 231 (386)
T COG1104 225 IHGGGQE 231 (386)
T ss_pred eccCcCC
Confidence 7777763
No 12
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=8.1e-26 Score=231.67 Aligned_cols=224 Identities=21% Similarity=0.252 Sum_probs=170.5
Q ss_pred ccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCC-CCCcceEEeC-ChHHHHHHHHh
Q 015609 158 ASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDS-DNWGVNVQPY-SCTSANFAVYT 235 (403)
Q Consensus 158 aSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~-~~~~v~V~~~-SGT~An~aal~ 235 (403)
+..+..+..|++++..++.+.+ +++++..+.-.....+.++.+|+.+++++|+++ + +|+|+ +.|+|++.+..
T Consensus 29 aa~~~~p~~V~~a~~~~~~~~~--an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~----eIvft~~tT~aln~va~ 102 (405)
T COG0520 29 AATSQKPQAVLDAVAEYYRRYN--ANVHRGAHTLAEEATDLYEAAREAVARFLNADSSD----EIVFTRGTTEALNLVAR 102 (405)
T ss_pred cccccCCHHHHHHHHHHHHhhc--CCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCC----eEEEeCChhHHHHHHHH
Confidence 4456689999999998876655 355543333344444444569999999999995 4 56666 56789999999
Q ss_pred hh---ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC-C-
Q 015609 236 GL---LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG-S- 310 (403)
Q Consensus 236 al---l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~-s- 310 (403)
++ +++||+|+++..+|.+++. ||.......| .++.+++++ +++.+|.+++++++.+ ++|+|.+.. |
T Consensus 103 ~l~~~~~~gdeIv~s~~EH~sn~~-----pw~~~~~~~G--a~v~~i~~~-~~g~~~~~~~~~~i~~-~Tklvais~vSn 173 (405)
T COG0520 103 GLGRSLKPGDEIVVSDLEHHSNIV-----PWQELAKRTG--AKVRVIPLD-DDGLLDLDALEKLITP-KTKLVALSHVSN 173 (405)
T ss_pred HhhhhhcCCCEEEEccCcchhhHH-----HHHHHHHhcC--cEEEEEecC-CCCCcCHHHHHHhcCC-CceEEEEECccc
Confidence 88 7999999999999866653 3321222223 456666776 5799999999998764 789998764 3
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCCCCCcccCCCc
Q 015609 311 SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRGKKPRKQGIPL 389 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~~~~~~~~~p~ 389 (403)
..|.+.|+++|.++||++|++++||++|++|+++.++... +||++++|+||||+||.| |+++.+++. + ..+.|.
T Consensus 174 ~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l---~~Df~afsgHKwl~gP~GiGvLy~r~~~-l-~~l~P~ 248 (405)
T COG0520 174 VTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQEL---GCDFLAFSGHKWLLGPTGIGVLYVRKEL-L-EELEPF 248 (405)
T ss_pred cccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhc---CCCEEEEcccccccCCCceEEEEEchHH-H-hhcCCc
Confidence 3588999999999999999999999999999875432111 499999999999999998 888887763 2 335888
Q ss_pred ccCCcceeeeec
Q 015609 390 NHGDVVVIMISR 401 (403)
Q Consensus 390 ~qGg~~~~s~~~ 401 (403)
..||+++..+++
T Consensus 249 ~~gg~~~~~~~~ 260 (405)
T COG0520 249 LGGGGMIEYVSR 260 (405)
T ss_pred ccCCCceeeecc
Confidence 899999998887
No 13
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.93 E-value=4.2e-25 Score=223.39 Aligned_cols=216 Identities=22% Similarity=0.259 Sum_probs=168.1
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-ChHHHHHHHHh
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPY-SCTSANFAVYT 235 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~-SGT~An~aal~ 235 (403)
..+.++++++|++||..++.+.| |||.++ +.|.+..+.+|. ||+.+|+|+|+++. +|+|+ ++|++|++++.
T Consensus 49 ~~at~p~~~~Vldam~~~~~~~~--~nPh~~-~y~w~~~~~~E~-aR~~VAklInAd~~----dIiFts~ATEs~Nlvl~ 120 (428)
T KOG1549|consen 49 NQATGPMDPRVLDAMLPYLLEYL--GNPHSR-SYGWKAEDAVEA-AREQVAKLINADPS----DIVFTSGATESNNLVLK 120 (428)
T ss_pred cCcCCCCCHHHHHHHHHHHHHhh--cCCCcc-ccchhhhHHHHH-HHHHHHHHhCCCCC----cEEEeCCchHHHHHHHH
Confidence 34688899999999999988766 899998 447777778886 89999999999996 46666 47899999999
Q ss_pred hh-ccCCC----eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC
Q 015609 236 GL-LLPGD----RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310 (403)
Q Consensus 236 al-l~pGD----~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s 310 (403)
++ +.++| +|+++..+|.+++- +.+ .+...++++.+++++ +.+.+|.+.+++.|+. +|++|.+...
T Consensus 121 ~v~~~~~~~~~k~iitl~~eH~~v~~------s~~--~l~~~g~~Vt~lpv~-~~~~~d~~~~~~~i~~-~T~lv~I~~V 190 (428)
T KOG1549|consen 121 GVARFFGDKTKKHIITLQTEHPCVLD------SCR--ALQEEGLEVTYLPVE-DSGLVDISKLREAIRS-KTRLVSIMHV 190 (428)
T ss_pred HhhccccccccceEEEecccCcchhH------HHH--HHHhcCeEEEEeccC-ccccccHHHHHHhcCC-CceEEEEEec
Confidence 98 56777 89999999776642 111 222334778888887 6899999999999985 7899877643
Q ss_pred --CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCCCCCcccCC
Q 015609 311 --SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRGKKPRKQGI 387 (403)
Q Consensus 311 --~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~~~~~~~~~ 387 (403)
..|..+|+++|.+||++.|+.+++|+||+.|+++.++... .+|++++++|||+ ||+| |++++++. ..+....
T Consensus 191 nn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~el---n~D~~s~s~HK~y-gp~~iGaLYvr~~-~~~~~~~ 265 (428)
T KOG1549|consen 191 NNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQEL---NADFLSISAHKIY-GPPGIGALYVRRK-RPRLRVE 265 (428)
T ss_pred ccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHc---Cchheeeeccccc-CCCcceEEEEccC-CCccccc
Confidence 3478899999999999999999999999999986443211 3999999999975 7886 99999872 2222334
Q ss_pred CcccCCcc
Q 015609 388 PLNHGDVV 395 (403)
Q Consensus 388 p~~qGg~~ 395 (403)
|-..||+.
T Consensus 266 p~~~GGgq 273 (428)
T KOG1549|consen 266 PPLSGGGQ 273 (428)
T ss_pred CcccCCcc
Confidence 44445544
No 14
>PLN02651 cysteine desulfurase
Probab=99.88 E-value=3e-21 Score=193.97 Aligned_cols=203 Identities=16% Similarity=0.209 Sum_probs=147.5
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCC-ccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHh
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGA-RYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYT 235 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgs-r~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~ 235 (403)
.++.+++++.|++++..++...+ ++|++ .+..+....+.+++ +|++++++||+++. ..++..++|+|+++++.
T Consensus 5 ~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~g~~~~---~v~~t~~~t~a~~~~l~ 78 (364)
T PLN02651 5 MQATTPIDPRVLDAMLPFLIEHF--GNPHSRTHLYGWESEDAVEK-ARAQVAALIGADPK---EIIFTSGATESNNLAIK 78 (364)
T ss_pred CcCCCCCCHHHHHHHHHHHHhCC--CCCChhhhHHHHHHHHHHHH-HHHHHHHHhCCCCC---eEEEeCCHHHHHHHHHH
Confidence 46788999999999998876544 56665 33333444455554 79999999999864 22344467889888776
Q ss_pred hh----ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC-
Q 015609 236 GL----LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS- 310 (403)
Q Consensus 236 al----l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s- 310 (403)
++ +++||+|++...+|.+...- + ..+... +++++.+++++ ++.+|++++++++++ ++++|++...
T Consensus 79 ~~~~~~~~~g~~vl~~~~~h~s~~~~-----~-~~~~~~--g~~v~~v~~~~-~~~~d~~~l~~~i~~-~t~lv~v~~~~ 148 (364)
T PLN02651 79 GVMHFYKDKKKHVITTQTEHKCVLDS-----C-RHLQQE--GFEVTYLPVKS-DGLVDLDELAAAIRP-DTALVSVMAVN 148 (364)
T ss_pred HHHHhccCCCCEEEEcccccHHHHHH-----H-HHHHhc--CCEEEEEccCC-CCcCCHHHHHHhcCC-CcEEEEEECCC
Confidence 54 47899999998887553210 0 111222 34555566653 678999999999975 5788877543
Q ss_pred -CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 311 -SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 311 -~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+|..+|+++|.++||++|+++++|++|++|.++.... .+ .+|++++++||| +||.| |+++.+++
T Consensus 149 n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~--~~-~~D~~~~s~hK~-~gp~G~g~l~v~~~ 215 (364)
T PLN02651 149 NEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVD--DL-GVDLMSISGHKI-YGPKGVGALYVRRR 215 (364)
T ss_pred CCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcc--cC-CCCEEEechhhh-CCCCceEEEEEcCC
Confidence 45788999999999999999999999999997653321 11 389999999996 79998 88888764
No 15
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.86 E-value=1.3e-20 Score=189.82 Aligned_cols=206 Identities=19% Similarity=0.239 Sum_probs=150.6
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhh
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTG 236 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~a 236 (403)
.++.+++++.|++++..++... .++|++.+..+....+.+++ +|++++++||++++ ..++..++|+++++++.+
T Consensus 5 ~aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~g~~~~---~i~~t~~~t~a~~~al~~ 78 (379)
T TIGR03402 5 NNATTRVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVEE-AREQVAKLLGAEPD---EIIFTSGGTESDNTAIKS 78 (379)
T ss_pred CcCCCCCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHHH-HHHHHHHHhCCCCC---eEEEeCcHHHHHHHHHHH
Confidence 4678899999999999887653 37777655444555565654 79999999999864 123444789999998887
Q ss_pred hc---cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC--C
Q 015609 237 LL---LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS--S 311 (403)
Q Consensus 237 ll---~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s--~ 311 (403)
++ .+||+|++...+|.+..... +.+...| ++++.+++++ ++.+|++++++++++ ++++|++... .
T Consensus 79 ~~~~~~~~~~vv~~~~~~~s~~~~~------~~~~~~G--~~v~~v~~~~-~g~~~~~~l~~~i~~-~~~lv~i~~~~n~ 148 (379)
T TIGR03402 79 ALAAQPEKRHIITTAVEHPAVLSLC------QHLEKQG--YKVTYLPVDE-EGRLDLEELRAAITD-DTALVSVMWANNE 148 (379)
T ss_pred HHHhcCCCCeEEEcccccHHHHHHH------HHHHHcC--CEEEEEccCC-CCcCCHHHHHHhcCC-CcEEEEEEcccCC
Confidence 64 46789999888875543211 1112223 4555556653 578999999999975 6788776533 3
Q ss_pred CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCCCCC
Q 015609 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRGKKP 382 (403)
Q Consensus 312 ~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~~~~ 382 (403)
+|..+|+++|.++|+++|+++++|++|++|.++..... ..+|++++|+|| ++||.| |+++.++...+
T Consensus 149 tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~---~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~~ 216 (379)
T TIGR03402 149 TGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKE---MNIDMLSLSGHK-LHGPKGVGALYIRKGTRF 216 (379)
T ss_pred eeecccHHHHHHHHHHcCCEEEEECcccccccccCccc---CCCCEEEEcHHH-cCCCCceEEEEECCCCCC
Confidence 57899999999999999999999999999876432211 149999999999 789998 88888765433
No 16
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.86 E-value=9.3e-21 Score=190.50 Aligned_cols=202 Identities=24% Similarity=0.306 Sum_probs=151.3
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCC-ccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEE-eCChHHHHHHHH
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGA-RYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQ-PYSCTSANFAVY 234 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgs-r~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~-~~SGT~An~aal 234 (403)
.++..++++.|++++..++.+.+ ++|.+ .++.+.+..+.+++ +|+.+++++|+++.+ .|+ ..++|.|+++++
T Consensus 5 ~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~lg~~~~~---~v~~~~~~t~a~~~~~ 78 (371)
T PF00266_consen 5 NAGTGPMPKSVLEAISDYLRNFY--ANPHSGVSHRSREFAEILEE-AREALAKLLGAPPDE---EVVFTSNGTEALNAVA 78 (371)
T ss_dssp TSSS-B-BHHHHHHHHHHHHHSG--SSTSTSSSTTSHHHHHHHHH-HHHHHHHHHTSSTTE---EEEEESSHHHHHHHHH
T ss_pred CCCccCCCHHHHHHHHHHHHHhh--hcCcccccchhhhhhHHHHH-HHHHHHHhcCCcccc---ccccccccchhhhhhh
Confidence 57888999999999998887766 44422 33345566666665 899999999999831 344 557888999999
Q ss_pred hhh---ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC-
Q 015609 235 TGL---LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS- 310 (403)
Q Consensus 235 ~al---l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s- 310 (403)
.++ +++||+|+++..+|.+...- +.......| +++..++.+. ++.+|++++++++. .++++|++...
T Consensus 79 ~~l~~~~~~g~~vl~~~~~~~s~~~~-----~~~~~~~~g--~~v~~i~~~~-~~~~~~~~~~~~l~-~~~~lv~~~~~~ 149 (371)
T PF00266_consen 79 SSLLNPLKPGDEVLVTSNEHPSNRYP-----WEEIAKRKG--AEVRVIPADP-GGSLDLEDLEEALN-PDTRLVSISHVE 149 (371)
T ss_dssp HHHHHHGTTTCEEEEEESSHHHHHHH-----HHHHHHHTT--EEEEEEEEGT-TSSCSHHHHHHHHH-TTESEEEEESBE
T ss_pred hccccccccccccccccccccccccc-----cccccccch--hhhccccccc-cchhhhhhhhhhhc-cccceEEeeccc
Confidence 999 79999999999887655310 101111223 4555556653 57899999999997 57898877643
Q ss_pred -CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 311 -SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 311 -~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
..|...|+++|.++||++|+++++|++|++|.++.. ++ ++|++++|+|| |.||+| |+++.++.
T Consensus 150 ~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id-----~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~ 216 (371)
T PF00266_consen 150 NSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPID-----LDELGADFLVFSSHK-LGGPPGLGFLYVRPE 216 (371)
T ss_dssp TTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS-------TTTTTESEEEEESTS-TTSSSTEEEEEEEHH
T ss_pred ccccEEeeeceehhhhhccCCceeEechhcccccccc-----ccccccceeeecccc-cCCCCchhhheehhh
Confidence 568899999999999999999999999999987532 33 49999999999 999998 88888874
No 17
>PRK02769 histidine decarboxylase; Provisional
Probab=99.85 E-value=5.7e-20 Score=187.21 Aligned_cols=200 Identities=18% Similarity=0.184 Sum_probs=144.4
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCC-CcceEEeCChHHHHHHHHhhh--cc
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDN-WGVNVQPYSCTSANFAVYTGL--LL 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~-~~v~V~~~SGT~An~aal~al--l~ 239 (403)
.....++.+...+.+.+ |+|++.+..|... .++|+.+++.++++||+++.+ || +++++||+||+.++.+. +.
T Consensus 34 ~~~~~~~~~~~~~~~n~--gnp~~~~~~g~~~-~~~e~~~~~~~a~l~g~~~~~~~G--~~TsGgTean~~a~~~ar~~~ 108 (380)
T PRK02769 34 FDYSALKRFFSFSINNC--GDPYSKSNYPLNS-FDFERDVMNFFAELFKIPFNESWG--YITNGGTEGNLYGCYLARELF 108 (380)
T ss_pred cCHHHHHHHHHhhhccC--CCccccCCCCCCh-HHHHHHHHHHHHHHhCCCCCCCCE--EEecChHHHHHHHHHHHHHhC
Confidence 44455666655655554 7787766545443 457778999999999997543 43 45567899998776554 46
Q ss_pred CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC--CCcEEEEe--CCCCCcc
Q 015609 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY--RPKILICG--GSSYPRE 315 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~--~pklViv~--~s~~g~~ 315 (403)
++++|+++..+|.+.. +.....+..... +++++ ++.+|+++|++++.+. +|.+|++. .+.+|.+
T Consensus 109 ~~~~ii~s~~~H~Sv~---------ka~~~lg~~~~~--V~~~~-~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~i 176 (380)
T PRK02769 109 PDGTLYYSKDTHYSVS---------KIARLLRIKSRV--ITSLP-NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAI 176 (380)
T ss_pred CCcEEEeCCCceehHH---------HHHHHcCCCCce--eccCC-CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCccc
Confidence 7899999998865542 334445544333 34453 6889999999999764 37776654 3457899
Q ss_pred ccHHHHHHHHHHcC---CEEEEeccccccccccccccCCCC---cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 316 WDYGRFRQIADKCG---AVLMCDMAHISGLIAAKELASPFD---YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 316 ~Di~~I~~Iake~G---a~LivDaAh~~Glia~g~~~~p~~---~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.|+++|+++|+++| +++|||+||+.|.++......+++ .+|.+++++||++++|.| |+++++++
T Consensus 177 dpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~ 247 (380)
T PRK02769 177 DNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKK 247 (380)
T ss_pred CCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehh
Confidence 99999999999998 699999999999875321111232 499999999999888998 99988875
No 18
>PLN03032 serine decarboxylase; Provisional
Probab=99.85 E-value=9.8e-20 Score=185.08 Aligned_cols=200 Identities=21% Similarity=0.212 Sum_probs=148.8
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCC-CcceEEeCChHHHHHHHHhhhc--c
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDN-WGVNVQPYSCTSANFAVYTGLL--L 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~-~~v~V~~~SGT~An~aal~all--~ 239 (403)
..+.++++|..++.+.+ |+|++.+..|.. ..++|+.+++.++++||++++. || +++++||+||+.++.+.. .
T Consensus 35 ~~~~~~~~~~~~~~~~~--gnP~s~~~~g~~-a~~~e~~v~~~ia~llg~~~~~~~G--~fTsGGTEaNl~al~~ar~~~ 109 (374)
T PLN03032 35 FDYGELSQLMKYSINNL--GDPFIESNYGVH-SRQFEVGVLDWFARLWELEKDEYWG--YITTCGTEGNLHGILVGREVF 109 (374)
T ss_pred cChHHHHHHHHhcccCC--CCCcccCCCCcc-HHHHHHHHHHHHHHHhCCCCccCCE--EEeCchHHHHHHHHHHHHHhC
Confidence 56678999888877665 899887655554 4567778999999999998754 44 566779999998887653 3
Q ss_pred CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC--CCcEEEE--eCCCCCcc
Q 015609 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY--RPKILIC--GGSSYPRE 315 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~--~pklViv--~~s~~g~~ 315 (403)
++.+|+++..+|.+.. +.+...+..+ ..+++++ +|.+|+++|++++.+. +|.+|++ +.+.+|.+
T Consensus 110 ~~~~vi~s~~~H~Sv~---------kaa~~lg~~~--~~V~~d~-~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~i 177 (374)
T PLN03032 110 PDGILYASRESHYSVF---------KAARMYRMEA--VKVPTLP-SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAV 177 (374)
T ss_pred CCcEEEeCCCceeHHH---------HHHHHcCCCC--eEeeeCC-CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccC
Confidence 5568999888754432 3445555443 4455664 6899999999999753 4666655 44567999
Q ss_pred ccHHHHHHHHHHcC-----CEEEEeccccccccccccccCCCC---cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 316 WDYGRFRQIADKCG-----AVLMCDMAHISGLIAAKELASPFD---YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 316 ~Di~~I~~Iake~G-----a~LivDaAh~~Glia~g~~~~p~~---~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.|+++|++||+++| +++|||+||+.+.++......+++ .+|.+++++||+++.|.| |++++++.
T Consensus 178 dpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~ 250 (374)
T PLN03032 178 DDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKK 250 (374)
T ss_pred CCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEch
Confidence 99999999999997 589999999998876321111122 499999999997755998 99998874
No 19
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.84 E-value=9.8e-20 Score=185.55 Aligned_cols=203 Identities=19% Similarity=0.188 Sum_probs=147.6
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCC-ccccchHHHHHHHHHHHHHHHHHcCC-CCCCCcceEEeC-ChHHHHHHH
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGA-RYYTGNQYIDQIENLCFERALKAFDL-DSDNWGVNVQPY-SCTSANFAV 233 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgs-r~~~G~~~~~~lE~~arerla~lfg~-~~~~~~v~V~~~-SGT~An~aa 233 (403)
.++.+++++.|++++..++...+ +++.+ .+..+....+.+++ +|+.+++++|+ ++. .|+++ ++|++++.+
T Consensus 29 ~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~----~v~~t~g~t~~l~~~ 101 (406)
T PRK09295 29 SAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKMEN-VRKQAALFINARSAE----ELVFVRGTTEGINLV 101 (406)
T ss_pred CcccccCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHHH-HHHHHHHHcCcCCCC----eEEEeCCHHHHHHHH
Confidence 56778899999999988876544 34432 34345556666765 79999999998 443 35555 567899988
Q ss_pred Hhh----hccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015609 234 YTG----LLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 234 l~a----ll~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
+.+ ++++||+|+++..+|.+.+. ++.......| ++++.+++++ ++.+|+++|++++.+ ++++|++..
T Consensus 102 ~~~~~~~~~~~gd~vl~~~~~~~s~~~-----~~~~~~~~~g--~~v~~v~~~~-~~~~d~~~l~~~i~~-~t~lv~l~~ 172 (406)
T PRK09295 102 ANSWGNSNVRAGDNIIISEMEHHANIV-----PWQMLCARVG--AELRVIPLNP-DGTLQLETLPALFDE-RTRLLAITH 172 (406)
T ss_pred HHHhhhhcCCCcCEEEECcchhhHHHH-----HHHHHHHHcC--cEEEEEecCC-CCCCCHHHHHHhcCC-CcEEEEEec
Confidence 876 46899999999988754321 1101112223 4556666664 578999999999864 688887764
Q ss_pred C--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 310 S--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 310 s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
. .+|..+|+++|.++|+++|+++++|++|+.|..+.... . ..+|++++|+|| +.||.| |+++.+++
T Consensus 173 ~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~--~-~~~D~~~~s~~K-~~gp~G~G~l~~~~~ 241 (406)
T PRK09295 173 VSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQ--A-LDCDFYVFSGHK-LYGPTGIGILYVKEA 241 (406)
T ss_pred chhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCch--h-cCCCEEEeehhh-ccCCCCcEEEEEchH
Confidence 3 35789999999999999999999999999987543211 0 148999999999 678998 88887765
No 20
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.84 E-value=1.4e-19 Score=180.71 Aligned_cols=202 Identities=20% Similarity=0.250 Sum_probs=147.0
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCCccc-cchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-ChHHHHHHHH
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGARYY-TGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPY-SCTSANFAVY 234 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~-~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~-SGT~An~aal 234 (403)
.++..++++.|++++..++...+ ++|+++.+ .+....+.+++ +|+++++++|++++ +|.++ ++|+|+++++
T Consensus 4 ~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l 76 (353)
T TIGR03235 4 HNATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAVER-ARKQVAEALGADTE----EVIFTSGATESNNLAI 76 (353)
T ss_pred CCCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHHH-HHHHHHHHhCCCCC----eEEEeCCHHHHHHHHH
Confidence 35678899999999998876544 57776533 24444444554 79999999999874 35555 5678999998
Q ss_pred hhhc----cCC-CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015609 235 TGLL----LPG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 235 ~all----~pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
.++. ++| ++|++...+|.+..... +.+... +++++.+++++ ++.+|+++|++++++ ++++|++..
T Consensus 77 ~~l~~~~~~~g~~~vi~~~~~~~s~~~~~------~~~~~~--G~~v~~v~~~~-~~~~d~~~l~~~l~~-~~~lv~~~~ 146 (353)
T TIGR03235 77 LGLARAGEQKGKKHIITSAIEHPAVLEPI------RALERN--GFTVTYLPVDE-SGRIDVDELADAIRP-DTLLVSIMH 146 (353)
T ss_pred HHHHHhcccCCCCeeeEcccccHHHHHHH------HHHHhc--CCEEEEEccCC-CCcCCHHHHHHhCCC-CCEEEEEEc
Confidence 8875 356 78998888765543111 111222 34566666663 578999999999864 678887654
Q ss_pred C--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 310 S--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 310 s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
. .+|...|+++|.++|+++|+++++|++|+.|.++.+... ..+|++++++||+ .||.| |+++.++.
T Consensus 147 ~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~---~~~D~~~~s~~K~-~gp~g~g~l~~~~~ 215 (353)
T TIGR03235 147 VNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSA---DRIDLISCSGHKI-YGPKGIGALVIRKR 215 (353)
T ss_pred ccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccc---cCCCEEEeehhhc-CCCCceEEEEEccC
Confidence 3 357889999999999999999999999999987533211 1499999999997 58987 88888765
No 21
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.84 E-value=1.6e-19 Score=183.97 Aligned_cols=202 Identities=21% Similarity=0.248 Sum_probs=144.5
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCCccc-cchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CChHHHHHHHH
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGARYY-TGNQYIDQIENLCFERALKAFDLDSDNWGVNVQP-YSCTSANFAVY 234 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~-~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~-~SGT~An~aal 234 (403)
.++..++++.|++++..++...+ ++++++.+ .+....+.++ .+|+.+++++|++++ .|++ .++|+++++++
T Consensus 9 ~aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l 81 (402)
T TIGR02006 9 YAATTPVDPRVAEKMMPYLTEKF--GNPASRSHSFGWEAEEAVE-NARNQVAELIGADSR----EIVFTSGATESNNLAI 81 (402)
T ss_pred CCcCCCCCHHHHHHHHHHHHhcC--CCCChhhhHHHHHHHHHHH-HHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHH
Confidence 46778899999999988876554 56664322 2223333444 478999999999874 3444 46788999888
Q ss_pred hhhc----cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC
Q 015609 235 TGLL----LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310 (403)
Q Consensus 235 ~all----~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s 310 (403)
.++. ++||+|++...+|.+..... ..+...| ++++.+++++ ++.+|++++++++.+ ++++|++...
T Consensus 82 ~~l~~~~~~~g~~Vi~~~~~h~s~~~~~------~~~~~~g--~~v~~v~~~~-~~~~d~~~l~~~l~~-~~~lv~v~~~ 151 (402)
T TIGR02006 82 KGIAHFYKSKGNHIITSKTEHKAVLDTC------RYLEREG--FEVTYLPPKS-NGLIDLEELKAAIRD-DTILVSIMHV 151 (402)
T ss_pred HHHHHhhcCCCCEEEECCCccHHHHHHH------HHHHhcC--CEEEEEccCC-CCcCCHHHHHHhcCC-CCEEEEEECC
Confidence 7653 68999999988765432110 1111223 4556666663 678999999999865 5788776543
Q ss_pred --CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 311 --SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 311 --~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+|...|+++|.++|+++|+++++|++|++|.++..... ..+|++++++||+ .||.| |+++.++.
T Consensus 152 ~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~---~~~D~~~~s~~K~-~gp~G~G~l~~~~~ 219 (402)
T TIGR02006 152 NNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNE---LKVDLMSISGHKI-YGPKGIGALYVRRK 219 (402)
T ss_pred CcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccc---cCCCEEEEehhhh-cCCCceEEEEEccC
Confidence 357889999999999999999999999999976532211 1499999999995 58987 77777764
No 22
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.83 E-value=1.1e-19 Score=181.07 Aligned_cols=199 Identities=18% Similarity=0.119 Sum_probs=142.6
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015609 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
++++|++..++++|++++...+.. .++ .. ..++.+.+++.++++||++..+ +.+.+.|||+|+.++
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~--------~~~---~~-~~~~~~~~~~~la~~~g~~~~~--~~~~~~~~t~al~~~ 66 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPMLG--------HRS---PE-FLALMDEILEGLRYVFQTENGL--TFLLSGSGTGAMEAA 66 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCccC--------CCC---HH-HHHHHHHHHHHHHHHhcCCCCC--EEEEecCcHHHHHHH
Confidence 578999999999999999643211 111 11 2233334678899999995432 234556789999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC--C
Q 015609 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS--S 311 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s--~ 311 (403)
+.+++++||+|++....|.++ .+. ..+...| .+++.+++++ ++.+|++++++.+++++|++|++... .
T Consensus 67 ~~~~~~~g~~vl~~~~~~~~~---~~~----~~~~~~g--~~~~~v~~~~-~~~~~~~~l~~~i~~~~~~~v~i~~~~~~ 136 (356)
T cd06451 67 LSNLLEPGDKVLVGVNGVFGD---RWA----DMAERYG--ADVDVVEKPW-GEAVSPEEIAEALEQHDIKAVTLTHNETS 136 (356)
T ss_pred HHHhCCCCCEEEEecCCchhH---HHH----HHHHHhC--CCeEEeecCC-CCCCCHHHHHHHHhccCCCEEEEeccCCC
Confidence 999999999999987554331 110 1123334 3455556654 46899999999997657888876543 3
Q ss_pred CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 312 ~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+|...|+++|.++|+++|+++++|++|++|..+.... .+ .+|++++++||+|++|.| |+++.+++
T Consensus 137 ~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~--~~-~~d~~~~s~~K~l~~p~g~G~l~~~~~ 202 (356)
T cd06451 137 TGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMD--EW-GVDVAYTGSQKALGAPPGLGPIAFSER 202 (356)
T ss_pred cccccCHHHHHHHHHhcCCEEEEeeehhccCcccccc--cc-CccEEEecCchhccCCCCcceeEECHH
Confidence 6788999999999999999999999999886432111 11 489999999999999987 88877654
No 23
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.83 E-value=1.6e-19 Score=183.43 Aligned_cols=199 Identities=16% Similarity=0.108 Sum_probs=143.1
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCC-ccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHh
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGA-RYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYT 235 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgs-r~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~ 235 (403)
|---.+++++|++|+..+.. .+ ++|.+ .+..+......+++ +++.+++++|+++ + ++++++|+||.+++.
T Consensus 26 ~~~~~p~~~~~~~a~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~-l~~~lA~~~g~~~----~-~~~~g~t~a~~~al~ 96 (387)
T PRK09331 26 IQRGGILTPEARKALIEYGD-GY--SVCDYCPGRLDQIKKPPIAD-FHEDLAEFLGMDE----A-RVTHGAREGKFAVMH 96 (387)
T ss_pred hhcCCCCCHHHHHHHHHHHh-cc--CCCcccccccccccChHHHH-HHHHHHHHhCCCc----E-EEeCCHHHHHHHHHH
Confidence 33467889999999998763 22 45433 22223222223443 6778999999976 2 456788999999999
Q ss_pred hhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec--CCCCCCCCHHHHHHHhccC------CCcEEEE
Q 015609 236 GLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV--NPQTGYIDYEKLEEKAMDY------RPKILIC 307 (403)
Q Consensus 236 all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v--d~~~g~ID~d~Le~~i~~~------~pklViv 307 (403)
+++++||+|++....|.+.+ ..+...| .+++.+++ ++ ++.+|++++++++++. ++++|++
T Consensus 97 ~l~~~gd~Vlv~~~~h~s~~---------~~~~~~G--~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~~lV~l 164 (387)
T PRK09331 97 SLCKKGDYVVLDGLAHYTSY---------VAAERAG--LNVREVPKTGYP-EYKITPEAYAEKIEEVKEETGKPPALALL 164 (387)
T ss_pred HhcCCCCEEEECCCchHHHH---------HHHHHcC--CEEEEEeCccCc-CCCcCHHHHHHHHHHhhhccCCCCEEEEE
Confidence 99999999999876543332 1233344 35555555 43 5779999999998743 5788877
Q ss_pred eCC--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 308 GGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 308 ~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
... .+|...|+++|.++|+++|++|++|++|+.|.++.... . ..+|++++|+||+|++|.| |+++++++
T Consensus 165 ~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~--~-~g~D~~~~s~~K~l~~~~~~G~l~~~~~ 236 (387)
T PRK09331 165 THVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGK--K-LGADFIVGSGHKSMAASAPSGVLATTEE 236 (387)
T ss_pred ECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHH--H-cCCCEEEeeCcccccCCCCEEEEEECHH
Confidence 643 36788999999999999999999999999986542211 0 1389999999999987754 88887764
No 24
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.83 E-value=3.2e-19 Score=181.18 Aligned_cols=203 Identities=21% Similarity=0.208 Sum_probs=148.2
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCC-ccccchHHHHHHHHHHHHHHHHHcCC-CCCCCcceEEe-CChHHHHHHH
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGA-RYYTGNQYIDQIENLCFERALKAFDL-DSDNWGVNVQP-YSCTSANFAV 233 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgs-r~~~G~~~~~~lE~~arerla~lfg~-~~~~~~v~V~~-~SGT~An~aa 233 (403)
.++.+++++.|++++..++...+ +++.+ .+..+....+.+++ +|+++++++|+ +++ +|.+ .|+|++++++
T Consensus 25 ~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~g~~~~~----~i~~~~~~t~~i~~~ 97 (401)
T PRK10874 25 SAATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYEA-AREQVAQLLNAPDAK----NIVWTRGTTESINLV 97 (401)
T ss_pred CCcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHHH-HHHHHHHHcCCCCCC----EEEEECCHHHHHHHH
Confidence 46677889999999998876544 56543 33344555666665 79999999999 453 4554 4678899999
Q ss_pred Hhhh----ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015609 234 YTGL----LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 234 l~al----l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
+.++ +++||+|++++.+|.+.+.. +.+.....| .+++.++++. ++.+|++++++++.+ ++++|++..
T Consensus 98 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~-----~~~~~~~~g--~~v~~v~~~~-~~~~d~~~l~~~i~~-~t~lv~i~~ 168 (401)
T PRK10874 98 AQSYARPRLQPGDEIIVSEAEHHANLVP-----WLMVAQQTG--AKVVKLPLGA-DRLPDVDLLPELITP-RTRILALGQ 168 (401)
T ss_pred HHHhhhccCCCcCEEEECCcchHHHHHH-----HHHHHHHhC--CEEEEEecCC-CCcCCHHHHHHhcCc-CcEEEEEeC
Confidence 8887 47999999999887654311 101112234 4555666653 578999999999964 689887764
Q ss_pred C--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 310 S--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 310 s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
. .+|..+|+++|.++|+++|+++++|++|+.|.++.... .+ .+|++++|+|| +.||.| |+++.+++
T Consensus 169 ~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~--~~-~~d~~~~s~~K-~~gp~G~G~l~~~~~ 237 (401)
T PRK10874 169 MSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQ--AL-DIDFYAFSGHK-LYGPTGIGVLYGKSE 237 (401)
T ss_pred CcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCch--hc-CCCEEEEeccc-ccCCCccEEEEEchH
Confidence 3 35788999999999999999999999999887653221 11 38999999999 568998 88877654
No 25
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.83 E-value=1.4e-19 Score=184.96 Aligned_cols=199 Identities=17% Similarity=0.150 Sum_probs=146.8
Q ss_pred cccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015609 152 KGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 152 ~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
..+.+.|++..++++|+++|...+..+ ......+.++ .++++++++||++..+ +.+++++||.++.
T Consensus 9 ~~~l~~pGP~~~~~~V~~a~~~~~~~~-----------~~~~~~~~~~-~~~~~l~~~~g~~~~~--~vi~~~~gt~a~~ 74 (401)
T PLN02409 9 RNHLFVPGPVNIPERVLRAMNRPNEDH-----------RSPAFPALTK-ELLEDVKYIFKTKSGT--PFIFPTTGTGAWE 74 (401)
T ss_pred CceeccCCCCCCCHHHHHHhcCCCCCC-----------CCHHHHHHHH-HHHHHHHHHhCCCCCC--EEEEeCCcHHHHH
Confidence 346789999999999999997544221 1233344444 4789999999997532 4466678999999
Q ss_pred HHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc---CCCcEEEEe
Q 015609 232 AVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD---YRPKILICG 308 (403)
Q Consensus 232 aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~---~~pklViv~ 308 (403)
+++.+++++||+|++....|.+. .+ ...+...| .+++.+++++ ++.+|+++|++++++ .++|+|++.
T Consensus 75 ~a~~~~~~~Gd~Vlv~~~~~~~~---~~----~~~~~~~g--~~v~~v~~~~-~~~~~~~~l~~~l~~~~~~~~k~v~~~ 144 (401)
T PLN02409 75 SALTNTLSPGDKVVSFRIGQFSL---LW----IDQMQRLN--FDVDVVESPW-GQGADLDILKSKLRQDTNHKIKAVCVV 144 (401)
T ss_pred HHHHhcCCCCCEEEEeCCCchhH---HH----HHHHHHcC--CceEEEECCC-CCCCCHHHHHHHHhhCcCCCccEEEEE
Confidence 99999999999999998554322 11 01122234 3455555554 345899999999986 368888775
Q ss_pred CC--CCCccccHHHHHHH--HHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 309 GS--SYPREWDYGRFRQI--ADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 309 ~s--~~g~~~Di~~I~~I--ake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+. .+|...|+++|.++ |+++|+++++|++|++|.++. .++ .+|++++++||||+||.| |+++.++.
T Consensus 145 ~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~i-----d~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~ 217 (401)
T PLN02409 145 HNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDF-----RMDEWGVDVALTGSQKALSLPTGLGIVCASPK 217 (401)
T ss_pred eecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccc-----cccccCccEEEEcCccccCcCCCcceeEECHH
Confidence 43 46889999999999 999999999999999886542 222 389999999999999998 88887654
No 26
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.83 E-value=6.2e-19 Score=176.63 Aligned_cols=201 Identities=21% Similarity=0.241 Sum_probs=140.5
Q ss_pred cCcHHHHHHHHHHhhhcCCCCCCCCccc-cchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CChHHHHHHHHhhhcc
Q 015609 162 FVCRAVMEALGSHLTNKYSEGYPGARYY-TGNQYIDQIENLCFERALKAFDLDSDNWGVNVQP-YSCTSANFAVYTGLLL 239 (403)
Q Consensus 162 ~~~p~V~eA~~s~l~~~y~eG~pgsr~~-~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~-~SGT~An~aal~all~ 239 (403)
..++.|++++...+.... ++++...| .+......++ .+++.+++++|++..+ +|++ .++|+|+.+++.++++
T Consensus 11 ~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~la~~~~~~~~~---~v~~~~g~t~al~~~~~~~~~ 84 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYG--GSPGRGRYRLALRASREVE-ETRQLLAKLFNAPSSA---HVVFTNNATTALNIALKGLLK 84 (376)
T ss_pred CCCHHHHHHHHHHHHhcC--CCCCcccchHHHHHHHHHH-HHHHHHHHHhCcCCCC---eEEEeCCHHHHHHHHHHhccC
Confidence 467899999987765421 23332222 1222223344 4688899999987531 4555 4788999999999999
Q ss_pred CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC--CCCcccc
Q 015609 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS--SYPREWD 317 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s--~~g~~~D 317 (403)
+||+|++...+|+++..- +.......| .+++.+++++ ++.+|++++++++.+ ++++|++... .+|...|
T Consensus 85 ~gd~vl~~~~~~~~~~~~-----~~~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~ 155 (376)
T TIGR01977 85 EGDHVITTPMEHNSVARP-----LECLKEQIG--VEITIVKCDN-EGLISPERIKRAIKT-NTKLIVVSHASNVTGTILP 155 (376)
T ss_pred CCCEEEECcchhhHHHHH-----HHHHHHHcC--cEEEEEecCC-CCCcCHHHHHHhcCC-CCeEEEEECCCCCccccCC
Confidence 999999988776554210 000111123 4556666664 578999999999864 6888876543 3678999
Q ss_pred HHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCCC
Q 015609 318 YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRGK 380 (403)
Q Consensus 318 i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~~ 380 (403)
+++|.++|+++|+++++|++|++|..+.+... ..+|++++++||||.||.| |+++.++..
T Consensus 156 ~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~---~~~D~~~~s~~K~l~~p~g~g~l~~~~~~ 216 (376)
T TIGR01977 156 IEEIGELAQENGIFFILDAAQTAGVIPIDMTE---LAIDMLAFTGHKGLLGPQGTGGLYIREGI 216 (376)
T ss_pred HHHHHHHHHHcCCEEEEEhhhccCccCCCchh---cCCCEEEecccccccCCCCceEEEEcCCc
Confidence 99999999999999999999999976533211 1499999999999999997 666666553
No 27
>PRK14012 cysteine desulfurase; Provisional
Probab=99.83 E-value=4e-19 Score=181.10 Aligned_cols=203 Identities=21% Similarity=0.261 Sum_probs=144.0
Q ss_pred eccCccCcHHHHHHHHHHhh--hcCCCCCCCCcccc-chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015609 157 IASENFVCRAVMEALGSHLT--NKYSEGYPGARYYT-GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~--~~y~eG~pgsr~~~-G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
.++.+++++.|++++..++. +.+ ++++++.+. +....+.+++ +|+++++++|++++. .++.+|||+|++++
T Consensus 9 ~a~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~ia~~~g~~~~~---v~~~~g~t~al~~~ 82 (404)
T PRK14012 9 YSATTPVDPRVAEKMMPYLTMDGTF--GNPASRSHRFGWQAEEAVDI-ARNQIADLIGADPRE---IVFTSGATESDNLA 82 (404)
T ss_pred CcCCCCCCHHHHHHHHHHHHhcccC--cCCCchhhHHHHHHHHHHHH-HHHHHHHHcCcCcCe---EEEeCCHHHHHHHH
Confidence 46677899999999988876 444 455543221 2222234443 688899999998752 34455788999988
Q ss_pred Hhhh----ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015609 234 YTGL----LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 234 l~al----l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
+.++ +++||+|++...+|.+..... +.+...| ++++.+++++ ++.+|+++|++++.+ ++++|++..
T Consensus 83 l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~------~~~~~~g--~~~~~v~~~~-~g~~d~~~l~~~i~~-~t~lv~~~~ 152 (404)
T PRK14012 83 IKGAAHFYQKKGKHIITSKTEHKAVLDTC------RQLEREG--FEVTYLDPQS-NGIIDLEKLEAAMRD-DTILVSIMH 152 (404)
T ss_pred HHHHHHhhcCCCCEEEEecCccHHHHHHH------HHHHhCC--CEEEEEccCC-CCcCCHHHHHHhcCC-CCEEEEEEC
Confidence 8776 378999999988765543211 1111123 4556666664 688999999999975 678887654
Q ss_pred C--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 310 S--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 310 s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
. .+|...|+++|.++|+++|+++++|++|++|..+.... . ..+|++++|+|| +.||.| |+++.++.
T Consensus 153 ~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~--~-~~~D~~~~s~~K-~~gp~g~G~l~~~~~ 221 (404)
T PRK14012 153 VNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLS--K-LKVDLMSFSAHK-IYGPKGIGALYVRRK 221 (404)
T ss_pred cCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcc--c-CCCCEEEEehhh-ccCCCceEEEEEecC
Confidence 3 36788999999999999999999999999987643211 1 148999999999 558877 77777664
No 28
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.83 E-value=2.9e-19 Score=184.83 Aligned_cols=201 Identities=13% Similarity=0.069 Sum_probs=144.3
Q ss_pred CccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC-C-CCCcceEEeCChHHHHHHHHhhh
Q 015609 160 ENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD-S-DNWGVNVQPYSCTSANFAVYTGL 237 (403)
Q Consensus 160 en~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~-~-~~~~v~V~~~SGT~An~aal~al 237 (403)
++++.|.+.++|.+.+...+ ++|.+ .|.. . ++|+.+++++++++|++ . .+. ..+++++||+||+.++.+.
T Consensus 50 tt~~~p~~~~~~~~~l~~~~--~np~s---~~~~-~-~le~~~~~~la~llg~~~~~~~~-~g~~TsGgTEAn~~al~~a 121 (431)
T TIGR01788 50 TTWMEPEARKLMDETINKNM--IDKDE---YPQT-A-EIENRCVNMLADLWHAPAKDAEA-VGTSTIGSSEAIMLGGLAM 121 (431)
T ss_pred CCCCCHHHHHHHHHHHhcCC--CCccc---CccH-H-HHHHHHHHHHHHHhCCCCCCCCC-eEEEechHHHHHHHHHHHH
Confidence 67889999999988875443 56654 2333 3 78888999999999998 2 221 1133567999999988665
Q ss_pred cc--------CC-----CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcE
Q 015609 238 LL--------PG-----DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 238 l~--------pG-----D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pkl 304 (403)
.. .| -+|+++..+|.+.. +.+...| +++..+++++.++.+|+++|++++.+ ++.+
T Consensus 122 r~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~---------ka~~~lg--~~v~~i~~d~~~~~vd~~~L~~~i~~-~t~l 189 (431)
T TIGR01788 122 KWRWRKRMEAAGKPTDKPNLVMGSNVQVCWE---------KFARYFD--VELREVPMDPGRYVIDPEQVVEAVDE-NTIG 189 (431)
T ss_pred HHHHHHHHHhcCCCCCCcEEEEcCcchHHHH---------HHHHHcC--ceeEEEecCCCceeeCHHHHHHHHhh-CCeE
Confidence 31 11 36888887753322 2333444 45666777763468999999999975 4677
Q ss_pred EEEe--CCCCCccccHHHHHHHHHHc------CCEEEEecccccccccc--ccccCCC--CcccEEEEcCcCCCcCCce-
Q 015609 305 LICG--GSSYPREWDYGRFRQIADKC------GAVLMCDMAHISGLIAA--KELASPF--DYCDIVTSTTHKSLRGPRG- 371 (403)
Q Consensus 305 Viv~--~s~~g~~~Di~~I~~Iake~------Ga~LivDaAh~~Glia~--g~~~~p~--~~aDivt~StHKtL~GP~G- 371 (403)
|++. .+.+|.++|+++|+++|+++ |+++|+|+||+.+..+. +..+..+ ..+|.+++++||++.||.|
T Consensus 190 V~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~ 269 (431)
T TIGR01788 190 VVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGV 269 (431)
T ss_pred EEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCc
Confidence 6554 44578999999999999999 99999999999776432 2222222 3599999999999889998
Q ss_pred EEEEEeCCC
Q 015609 372 GIIFFRRGK 380 (403)
Q Consensus 372 G~I~~~~~~ 380 (403)
|++++++..
T Consensus 270 G~l~~r~~~ 278 (431)
T TIGR01788 270 GWVIWRDEE 278 (431)
T ss_pred EEEEEeChH
Confidence 999888763
No 29
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.83 E-value=4.3e-19 Score=180.08 Aligned_cols=203 Identities=19% Similarity=0.157 Sum_probs=146.1
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCC-ccccchHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEe-CChHHHHHHH
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGA-RYYTGNQYIDQIENLCFERALKAFDLD-SDNWGVNVQP-YSCTSANFAV 233 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgs-r~~~G~~~~~~lE~~arerla~lfg~~-~~~~~v~V~~-~SGT~An~aa 233 (403)
.++.+++++.|++++..++...+ ++++. .+..+....+.+++ +|+.+++++|++ ++ +|++ .++|++++++
T Consensus 22 ~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~g~~~~~----~i~~t~g~t~~l~~~ 94 (398)
T TIGR03392 22 SAATALKPQAVIDATQQFYRLSS--GTVHRSQHQQAQSLTARYEL-ARQQVARFLNAPDAE----NIVWTRGTTESINLV 94 (398)
T ss_pred CccccCCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHHH-HHHHHHHHhCCCCCC----eEEEeCChHHHHHHH
Confidence 45677889999999988775443 55543 33334444555665 799999999995 43 3554 4678899999
Q ss_pred Hhhh----ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015609 234 YTGL----LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 234 l~al----l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
+.++ +++||+|++.+.+|.+.+.. +.......| .+++.+++++ ++.+|++++++++.+ ++++|++..
T Consensus 95 ~~~~~~~~~~~gd~Vl~~~~~~~s~~~~-----~~~~~~~~g--~~v~~v~~~~-~~~~~~~~l~~~i~~-~t~lv~i~~ 165 (398)
T TIGR03392 95 AQSYARPRLQPGDEIIVSEAEHHANLIP-----WLMVAQQTG--AKVVKLPIGA-DLLPDIRQLPELLTP-RTRILALGQ 165 (398)
T ss_pred HHHhhhccCCCCCEEEECCcchhHHHHH-----HHHHHHHcC--cEEEEEecCC-CCCcCHHHHHHHhcc-CceEEEEEC
Confidence 9887 58999999999887554211 101112233 4566666664 467999999999865 688887764
Q ss_pred C--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 310 S--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 310 s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
. .+|..+|+++|.++|+++|+++++|++|+.|..+.... .+ .+|++++|+|| +.||.| |+++.+++
T Consensus 166 ~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~--~~-~~d~~~~s~~K-~~gp~G~G~l~~~~~ 234 (398)
T TIGR03392 166 MSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQ--AL-DIDFYAFSGHK-LYGPTGIGVLYGKTE 234 (398)
T ss_pred ccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChh--hc-CCCEEEEeccc-ccCCCceEEEEEcHH
Confidence 3 35788999999999999999999999999886542211 11 38999999999 568988 88877654
No 30
>PRK02948 cysteine desulfurase; Provisional
Probab=99.82 E-value=4.9e-19 Score=178.45 Aligned_cols=203 Identities=12% Similarity=0.164 Sum_probs=148.6
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-ChHHHHHHHHh
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPY-SCTSANFAVYT 235 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~-SGT~An~aal~ 235 (403)
.++.+++++.|++++..++...+ +++++.+..+....+.+|+ +|+.+++++|++++ +|+++ ++|++|+.++.
T Consensus 6 ~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~r~~la~~~g~~~~----~i~~~~g~t~a~~~~~~ 78 (381)
T PRK02948 6 YAATTPMSKEALQTYQKAASQYF--GNESSLHDIGGTASSLLQV-CRKTFAEMIGGEEQ----GIYFTSGGTESNYLAIQ 78 (381)
T ss_pred CCCCCCCCHHHHHHHHHHHHhcC--CCCccccHHHHHHHHHHHH-HHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHH
Confidence 46778899999999988776543 5666666556555555654 79999999998864 45555 46889998888
Q ss_pred hhc----cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC-
Q 015609 236 GLL----LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS- 310 (403)
Q Consensus 236 all----~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s- 310 (403)
+++ ++||+|++...+|.+..... +.+...| .++..+++++ ++.+|+++|++++++ ++++|++...
T Consensus 79 ~~~~~~~~~g~~vv~~~~~h~s~~~~~------~~~~~~g--~~v~~v~~~~-~~~~d~~~l~~~l~~-~~~lv~~~~~~ 148 (381)
T PRK02948 79 SLLNALPQNKKHIITTPMEHASIHSYF------QSLESQG--YTVTEIPVDK-SGLIRLVDLERAITP-DTVLASIQHAN 148 (381)
T ss_pred HHHHhccCCCCEEEECCcccHHHHHHH------HHHHhCC--CEEEEEeeCC-CCCCCHHHHHHhcCC-CCEEEEEECCc
Confidence 775 57899999988765432110 1122233 4555566653 578999999999864 5788877643
Q ss_pred -CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCCC
Q 015609 311 -SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRGK 380 (403)
Q Consensus 311 -~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~~ 380 (403)
.+|..+|+++|.++|+++|+++++|++|.+|.++.... .+ .+|++++|+||+ .||.| |+++.+++.
T Consensus 149 n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~--~~-~~d~~~~s~~K~-~gp~G~G~l~~~~~~ 216 (381)
T PRK02948 149 SEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVF--EM-GIDSLSVSAHKI-YGPKGVGAVYINPQV 216 (381)
T ss_pred CCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcc--cC-CCCEEEecHHhc-CCCCcEEEEEEcCCC
Confidence 35789999999999999999999999999986543211 11 389999999995 58988 888877654
No 31
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.81 E-value=1.3e-18 Score=178.39 Aligned_cols=204 Identities=15% Similarity=0.132 Sum_probs=146.3
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCC-ccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-ChHHHHH
Q 015609 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGA-RYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPY-SCTSANF 231 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgs-r~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~-SGT~An~ 231 (403)
++ .++..++++.|++++..++...+ +++.+ .++.+....+.+++ +|+.+++++|++..+ +|+++ ++|++++
T Consensus 36 Ld-~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~---~v~~t~g~t~al~ 108 (424)
T PLN02855 36 LD-NAATSQKPAAVLDALQDYYEEYN--SNVHRGIHALSAKATDAYEL-ARKKVAAFINASTSR---EIVFTRNATEAIN 108 (424)
T ss_pred ee-CccccCCCHHHHHHHHHHHHhcC--CCCCCccchHHHHHHHHHHH-HHHHHHHHcCCCCCC---EEEEeCCHHHHHH
Confidence 44 36677889999999988775543 34433 23334444555654 799999999995321 35554 6788988
Q ss_pred HHHhh----hccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE
Q 015609 232 AVYTG----LLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 232 aal~a----ll~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv 307 (403)
.++.+ .+++||+|+++..+|.+.+... .......| ++++.+++++ .+.+|++++++.+.+ ++++|++
T Consensus 109 ~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~-----~~~a~~~g--~~v~~v~~~~-~~~~~~~~l~~~i~~-~t~lv~i 179 (424)
T PLN02855 109 LVAYTWGLANLKPGDEVILSVAEHHSNIVPW-----QLVAQKTG--AVLKFVGLTP-DEVLDVEQLKELLSE-KTKLVAT 179 (424)
T ss_pred HHHHHhhhhcCCCcCEEEECCCccHHHHHHH-----HHHHHHcC--CEEEEEecCC-CCCcCHHHHHHHhcc-CceEEEE
Confidence 88876 3689999999998876543111 01112223 4556666654 356999999999975 7898877
Q ss_pred eCC--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 308 GGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 308 ~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
... .+|..+|+++|.++|+++|+++++|++|+.|.++.+ +. .+|++++|+|| +.||.| |+++.+++
T Consensus 180 ~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~-----~~~~~~d~~~~s~~K-~~gp~G~G~l~~~~~ 250 (424)
T PLN02855 180 HHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVD-----VQTLGADFLVASSHK-MCGPTGIGFLWGKSD 250 (424)
T ss_pred eCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCC-----chhcCCCEEEeeccc-ccCCCccEEEEEchh
Confidence 643 357899999999999999999999999998865422 22 38999999999 678998 88887764
No 32
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.81 E-value=5e-19 Score=177.28 Aligned_cols=200 Identities=15% Similarity=0.064 Sum_probs=141.8
Q ss_pred cccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015609 152 KGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 152 ~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
+.+.|.|++..++++|+++|...+ .. .+.++.+.+|+ +|+.++++||+++.+. ..+++.|||.|++
T Consensus 3 ~~~l~~pgp~~~~~~v~~~~~~~~-~~-----------~~~~~~~~~~~-~r~~la~l~~~~~~~~-~i~~t~~~t~al~ 68 (363)
T TIGR02326 3 NYLLLTPGPLTTSRTVKEAMLFDW-CT-----------WDSDYNIVVEQ-IRQQLLALATAEEGYT-SVLLQGSGTFAVE 68 (363)
T ss_pred ceeEecCCCCCCCHHHHHHhCCCC-CC-----------CChHHHHHHHH-HHHHHHHHhCCCCCce-EEEEcCCCHHHHH
Confidence 356799999999999999987543 11 12355666665 7999999999975310 1234557899999
Q ss_pred HHHhhhccCCCeEEecCC-CCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC-CCcEEEEe-
Q 015609 232 AVYTGLLLPGDRIMGLDS-PSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY-RPKILICG- 308 (403)
Q Consensus 232 aal~all~pGD~VL~~~~-ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~-~pklViv~- 308 (403)
+++.+++.+||+|++... .++..+. ......| ++++.+++++ ++.+|++++++++++. ++++|++.
T Consensus 69 ~~~~~l~~~~~~vlv~~~~~~~~~~~--------~~a~~~g--~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~ 137 (363)
T TIGR02326 69 AVIGSAVPKDGKLLVVINGAYGARIV--------QIAEYLG--IPHHVVDTGE-VEPPDVVEVEAILAADPAITHIALVH 137 (363)
T ss_pred HHHHhcCCCCCeEEEEeCChhhHHHH--------HHHHHcC--CceEEEeCCC-CCCCCHHHHHHHHhhCCCccEEEEEe
Confidence 999999989988766442 2211110 1112233 3445555553 5789999999998753 34655443
Q ss_pred -CCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 309 -GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 309 -~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+.+|..+|+++|.++|+++|+++++|++|++|..+..... + .+|++++|+||+|+||.| |+++.+++
T Consensus 138 ~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~--~-~~D~~~~s~~K~l~~p~G~G~l~~~~~ 207 (363)
T TIGR02326 138 CETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAE--L-HIDYLISSANKCIQGVPGFGFVIARQA 207 (363)
T ss_pred ecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhh--c-CccEEEecCccccccCCcceEEEECHH
Confidence 34578899999999999999999999999998875432111 1 389999999999999998 88888764
No 33
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.81 E-value=1.2e-18 Score=175.89 Aligned_cols=205 Identities=17% Similarity=0.242 Sum_probs=149.2
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC-CCCCCcceEEeC-ChHHHHHHHH
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL-DSDNWGVNVQPY-SCTSANFAVY 234 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~-~~~~~~v~V~~~-SGT~An~aal 234 (403)
.++.+++++.|++++..++.+.| ++|++.+..+......+++ +++++++.+++ +++ +|.++ ++|++++.++
T Consensus 5 ~aa~~~~~~~v~~~~~~~~~~~~--~n~~~~~~~~~~~~~~l~~-a~~~~~~~~~~~~~~----~i~~t~g~teal~~~~ 77 (382)
T TIGR03403 5 NNATTMLDPKVKELMDPFFCDIY--GNPNSLHQFGTATHPAIAE-ALDKLYKGINARDLD----DIIITSCATESNNWVL 77 (382)
T ss_pred CcCCCCCCHHHHHHHHHHHHhcC--cCCccccHHHHHHHHHHHH-HHHHHHHHcCcCCCC----eEEEeCCHHHHHHHHH
Confidence 36788899999999998887655 5777655555555666765 78888888987 443 45555 5788999988
Q ss_pred hhhc-----cC-CCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe
Q 015609 235 TGLL-----LP-GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308 (403)
Q Consensus 235 ~all-----~p-GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~ 308 (403)
.++. ++ +|+|+++..+|.+..... ..+...| .+++.+++++ ++.+|++++++++.+ ++++|++.
T Consensus 78 ~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~------~~~~~~G--~~v~~v~~~~-~g~~d~~~l~~~i~~-~t~lv~~~ 147 (382)
T TIGR03403 78 KGVYFDEILKGGKNHIITTEVEHPAVRATC------AFLESLG--VEVTYLPINE-QGTITAEQVREAITE-KTALVSVM 147 (382)
T ss_pred HHHHHhhcccCCCCEEEEcCCccHHHHHHH------HHHHHCC--CEEEEEecCC-CCCCCHHHHHHhccc-CCeEEEEE
Confidence 8762 55 478999988876543211 1112223 4566666664 578999999999874 57887765
Q ss_pred CC--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCCCCC
Q 015609 309 GS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRGKKP 382 (403)
Q Consensus 309 ~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~~~~ 382 (403)
.. .+|..+|+++|.++|+++|+++++|++|++|.++..... .++|++++|+||+ .||+| |+++.+++..+
T Consensus 148 ~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~---~~~D~~~~s~~K~-~gp~G~g~l~vr~~~~~ 220 (382)
T TIGR03403 148 WANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQK---AGVDFLSFSAHKF-HGPKGVGGLYIRKGVEL 220 (382)
T ss_pred cccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccc---cCCCEEEEcchhh-CCCCceEEEEECCCCCC
Confidence 33 357889999999999999999999999999876432111 1499999999996 68998 88888876543
No 34
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.81 E-value=1.4e-18 Score=174.06 Aligned_cols=204 Identities=18% Similarity=0.158 Sum_probs=147.0
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCCcc-ccchHHHHHHHHHHHHHHHHHcCCC-CCCCcceEE-eCChHHHHHHH
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGARY-YTGNQYIDQIENLCFERALKAFDLD-SDNWGVNVQ-PYSCTSANFAV 233 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~-~~G~~~~~~lE~~arerla~lfg~~-~~~~~v~V~-~~SGT~An~aa 233 (403)
.++..++++.+++++...+...+ ++|.+.. ..+....+.++ .+++.++++||++ +. +|+ .+|+|+|++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~la~~~~~~~~~----~v~~~~g~t~a~~~~ 77 (373)
T cd06453 5 NAATSQKPQPVIDAIVDYYRHYN--ANVHRGVHELSARATDAYE-AAREKVARFINAPSPD----EIIFTRNTTEAINLV 77 (373)
T ss_pred CccccCCCHHHHHHHHHHHHhcC--CCCCCCccHHHHHHHHHHH-HHHHHHHHHhCCCCCC----eEEEeCCHHHHHHHH
Confidence 46788899999999988876543 4665533 23334444444 4788999999998 43 344 45678899999
Q ss_pred Hhhhcc---CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC
Q 015609 234 YTGLLL---PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310 (403)
Q Consensus 234 l~all~---pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s 310 (403)
+.++.. +||+|+++..+|.++..... ......| .+++.++++ +++.+|++++++++.+ ++++|++...
T Consensus 78 ~~~l~~~~~~g~~vl~~~~~~~~~~~~~~-----~~~~~~g--~~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~ 148 (373)
T cd06453 78 AYGLGRANKPGDEIVTSVMEHHSNIVPWQ-----QLAERTG--AKLKVVPVD-DDGQLDLEALEKLLTE-RTKLVAVTHV 148 (373)
T ss_pred HHHhhhcCCCCCEEEECcchhHHHHHHHH-----HHHhhcC--cEEEEeecC-CCCCcCHHHHHHHhcC-CceEEEEeCc
Confidence 999877 89999999988765431110 0112233 345555665 4678999999999975 6888877644
Q ss_pred C--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 311 S--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 311 ~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
+ +|...|+++|.++|+++|++|++|++|+.|..+..... ..+|++++|+||++.++..|+++.+++
T Consensus 149 ~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~---~~~d~~~~s~~K~~~~~g~g~~~~~~~ 216 (373)
T cd06453 149 SNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQD---LGCDFLAFSGHKMLGPTGIGVLYGKEE 216 (373)
T ss_pred ccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccc---cCCCEEEeccccccCCCCcEEEEEchH
Confidence 3 57889999999999999999999999998875422111 148999999999987754588887764
No 35
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.81 E-value=2e-18 Score=175.10 Aligned_cols=203 Identities=16% Similarity=0.161 Sum_probs=145.5
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCCc-cccchHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEe-CChHHHHHHH
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGAR-YYTGNQYIDQIENLCFERALKAFDLD-SDNWGVNVQP-YSCTSANFAV 233 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgsr-~~~G~~~~~~lE~~arerla~lfg~~-~~~~~v~V~~-~SGT~An~aa 233 (403)
.++.+.+++.|++++...+...+ +++... ++.+....+.+++ +|+.+++++|++ ++ +|++ .++|++++++
T Consensus 24 ~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~ia~~~~~~~~~----~v~~~~g~t~~l~~~ 96 (403)
T TIGR01979 24 SAATSQKPQQVIDAVAEYYRNSN--ANVHRGIHTLSVRATEAYEA-VREKVAKFINAASDE----EIVFTRGTTESINLV 96 (403)
T ss_pred CccccCCCHHHHHHHHHHHHhCC--CCCCCCccHHHHHHHHHHHH-HHHHHHHHhCcCCCC----eEEEeCCHHHHHHHH
Confidence 56677889999999988776654 455432 2223344445654 799999999998 33 3444 4677888888
Q ss_pred Hhhh----ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015609 234 YTGL----LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 234 l~al----l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
+.++ +++||+|++.+.+|.++.... .......| .+++.++++ +++.+|++++++.+.+ ++++|++..
T Consensus 97 ~~~~~~~~~~~g~~vl~~~~~~~s~~~~~-----~~~~~~~g--~~~~~v~~~-~~~~~~~~~l~~~i~~-~~~lv~~~~ 167 (403)
T TIGR01979 97 AYSWGDSNLKAGDEIVISEMEHHANIVPW-----QLLAERTG--ATLKFIPLD-DDGTLDLDDLEKLLTE-KTKLVAITH 167 (403)
T ss_pred HHHhhhhcCCCCCEEEECcchhhHHHHHH-----HHHHHhcC--cEEEEEecC-CCCCCCHHHHHHHhcc-CCeEEEEEc
Confidence 7764 689999999998876643211 01112233 455566666 4688999999999864 688887764
Q ss_pred CC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 310 SS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 310 s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+ +|...|+++|.++|+++|+++++|++|+.|..+.... .+ .+|++++|+||++ ||.| |+++.+++
T Consensus 168 ~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~--~~-~~d~~~~s~~K~~-gp~G~g~l~~~~~ 236 (403)
T TIGR01979 168 VSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQ--AL-DCDFYVFSGHKMY-GPTGIGVLYGKEE 236 (403)
T ss_pred ccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCcc--cc-CCCEEEEeccccc-CCCCceEEEEchH
Confidence 33 5788999999999999999999999999987543211 11 4899999999965 8988 88877754
No 36
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.80 E-value=1.7e-18 Score=174.91 Aligned_cols=199 Identities=20% Similarity=0.292 Sum_probs=145.7
Q ss_pred cceeccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccch-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHH
Q 015609 154 IELIASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTGN-QYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTS 228 (403)
Q Consensus 154 l~LiaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G~-~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~ 228 (403)
+..+++.+|+ +|+|++++...+.. |..+++++++..|. +...++ ++.+++++|.+. .+.++||++
T Consensus 40 ~i~~~~~~~lg~~~~~~v~~~~~~~~~~-~~~~~~~s~~~~G~~~~~~~l----e~~ia~~~g~~~-----~ii~~~~~~ 109 (393)
T TIGR01822 40 VLNFCANNYLGLSSHPDLIQAAKDALDE-HGFGMSSVRFICGTQDIHKEL----EAKIAAFLGTED-----TILYASCFD 109 (393)
T ss_pred EEEeeCCCccccCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHHH----HHHHHHHhCCCc-----EEEECchHH
Confidence 4445677774 88999998877654 44588899988885 334444 456999999875 467789999
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC-----CCc
Q 015609 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY-----RPK 303 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~-----~pk 303 (403)
||.+++.+++++||+|++....|.+... .+.+.+. ..+.+ ..+|++++++++++. +++
T Consensus 110 a~~~~~~~l~~~gd~vi~~~~~~~s~~~---------~~~~~~~--~~~~~------~~~d~~~l~~~i~~~~~~~~~~~ 172 (393)
T TIGR01822 110 ANGGLFETLLGAEDAIISDALNHASIID---------GVRLCKA--KRYRY------ANNDMADLEAQLKEARAAGARHR 172 (393)
T ss_pred HHHHHHHHhCCCCCEEEEeccccHHHHH---------HHHhcCC--ceEEe------CCCCHHHHHHHHHhhhhcCCCce
Confidence 9999999999999999999887654321 1222222 11221 248999999988742 567
Q ss_pred EEEEeC--CCCCccccHHHHHHHHHHcCCEEEEecccccccccccc---cc-CCC-CcccEEEEcCcCCCcCCceEEEEE
Q 015609 304 ILICGG--SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKE---LA-SPF-DYCDIVTSTTHKSLRGPRGGIIFF 376 (403)
Q Consensus 304 lViv~~--s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~---~~-~p~-~~aDivt~StHKtL~GP~GG~I~~ 376 (403)
+|+++. +.+|.+.|+++|.++|+++|++|++|++|..|...... .. ..+ +.+|++++|+||+|.|++||+++.
T Consensus 173 ~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~ 252 (393)
T TIGR01822 173 LIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTA 252 (393)
T ss_pred EEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEe
Confidence 777664 34577899999999999999999999999988754211 00 111 148999999999999999999988
Q ss_pred eCC
Q 015609 377 RRG 379 (403)
Q Consensus 377 ~~~ 379 (403)
+++
T Consensus 253 ~~~ 255 (393)
T TIGR01822 253 RKE 255 (393)
T ss_pred CHH
Confidence 654
No 37
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.80 E-value=1.1e-18 Score=176.68 Aligned_cols=186 Identities=19% Similarity=0.208 Sum_probs=146.7
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh-ccCC
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL-LLPG 241 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al-l~pG 241 (403)
+....++++...+.+.+- ...+++.++|+. +++++|+++ .|.++|||.|++++++++ +.||
T Consensus 13 i~~~e~~~v~~vl~sg~i---------~~G~~v~~FE~~----~ae~~G~k~-----ava~~sgT~AL~laL~al~ig~G 74 (374)
T COG0399 13 IGEEELAAVQEVLKSGWL---------TGGPFVRRFEQA----FAEYLGVKY-----AVAVSSGTAALHLALLALAIGPG 74 (374)
T ss_pred cchHHHHHHHHHHHcCCe---------ecChHHHHHHHH----HHHHhCCCe-----EEEecChHHHHHHHHHhcCCCCC
Confidence 566777888877766541 124567788874 899999998 377889999999999976 7999
Q ss_pred CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHH
Q 015609 242 DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRF 321 (403)
Q Consensus 242 D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I 321 (403)
|+||++++.+-+.. +.+...| .+.+.+++|+++..||++.||++|.+ ++|.|+.. +.+|...|++.|
T Consensus 75 DeVI~ps~TfvATa---------n~i~~~G--a~PVFvDid~~T~nid~~~ie~aIt~-~tKAIipV-hl~G~~~dm~~i 141 (374)
T COG0399 75 DEVIVPSFTFVATA---------NAVLLVG--AKPVFVDIDPDTLNIDPDLIEAAITP-RTKAIIPV-HLAGQPCDMDAI 141 (374)
T ss_pred CEEEecCCchHHHH---------HHHHHcC--CeEEEEecCCcccCCCHHHHHHHccc-CCeEEEEe-hhccCCCCHHHH
Confidence 99999997643221 2333444 57888999999999999999999986 58877654 478999999999
Q ss_pred HHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCc--CCCcCCceEEEEEeCCCC
Q 015609 322 RQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTH--KSLRGPRGGIIFFRRGKK 381 (403)
Q Consensus 322 ~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StH--KtL~GP~GG~I~~~~~~~ 381 (403)
.+||++||++|+.|+||+.|....|.....+ .|+.++|+| |.|..-.||+|++++++.
T Consensus 142 ~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~--Gd~~~fSF~~~K~ittgEGGav~tnd~el 201 (374)
T COG0399 142 MALAKRHGLPVIEDAAQAHGATYKGKKVGSF--GDIGAFSFHATKNLTTGEGGAVVTNDEEL 201 (374)
T ss_pred HHHHHHcCCeEEEEcchhccCeecCcccccc--cceEEEEecCCCCccccCceEEEeCCHHH
Confidence 9999999999999999999988766433333 566666665 988666899999999753
No 38
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.79 E-value=2.9e-18 Score=173.38 Aligned_cols=202 Identities=17% Similarity=0.203 Sum_probs=141.9
Q ss_pred eccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CChHHHHHHHHh
Q 015609 157 IASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQP-YSCTSANFAVYT 235 (403)
Q Consensus 157 iaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~-~SGT~An~aal~ 235 (403)
.++...+++.|++++...+.... .+++..|.......+.++ .+|+.+++++|+++. +|.+ .++++++..++.
T Consensus 23 ~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~l~~~ia~~~~~~~~----~v~~~~~~t~~l~~~~~ 95 (397)
T TIGR01976 23 NPAGTQIPQSVADAVSAALTRSN--ANRGGAYESSRRADQVVD-DAREAVADLLNADPP----EVVFGANATSLTFLLSR 95 (397)
T ss_pred CCccCCCCHHHHHHHHHHHHhcC--CCCCCCchHHHHHHHHHH-HHHHHHHHHcCCCCC----eEEEeCCHHHHHHHHHH
Confidence 57788899999999988775432 234333322222223344 468889999999864 3444 457778777666
Q ss_pred hh---ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC--
Q 015609 236 GL---LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS-- 310 (403)
Q Consensus 236 al---l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s-- 310 (403)
++ ++|||+|++...+|.+++... .......| .+++.++++++++.+|++++++++.+ ++++|++...
T Consensus 96 ~~~~~~~~gd~vl~~~~~~~s~~~~~-----~~~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~i~~-~~~lv~i~~~~n 167 (397)
T TIGR01976 96 AISRRWGPGDEVIVTRLDHEANISPW-----LQAAERAG--AKVKWARVDEATGELHPDDLASLLSP-RTRLVAVTAASN 167 (397)
T ss_pred HHHhcCCCCCEEEEcCCchHhHHHHH-----HHHHHhcC--CEEEEEeccccCCCcCHHHHHHhcCC-CceEEEEeCCCC
Confidence 64 689999999988765543111 01112233 45556666654678999999999864 5788776543
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 311 SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
.+|...|+++|.++|+++|+++++|++|+.|.... .+. .+|++++|+||++ ||+.|+++.+++
T Consensus 168 ~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~-----~~~~~~~d~~~~s~~K~~-g~~~G~l~~~~~ 232 (397)
T TIGR01976 168 TLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLI-----DVQATGADFLTCSAYKFF-GPHMGILWGRPE 232 (397)
T ss_pred CCCccCCHHHHHHHHHHcCCEEEEehhhhccccCC-----CHHHcCCCEEEEechhhc-CCceEEEEEcHH
Confidence 35788999999999999999999999998774321 222 4899999999987 788899888764
No 39
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=3.6e-18 Score=172.97 Aligned_cols=198 Identities=19% Similarity=0.201 Sum_probs=150.1
Q ss_pred ccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHH
Q 015609 153 GIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFA 232 (403)
Q Consensus 153 ~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~a 232 (403)
.+.|+|+++.++++|+++|.....+++ ..++.+.+. .+++.++.+|+++... +.+...|||.|+.+
T Consensus 6 ~~Ll~PGP~~v~~~V~~am~~~~~~h~-----------s~~F~~~~~-~~~~~L~~v~~t~~~~--~~ll~gsGt~amEA 71 (383)
T COG0075 6 RLLLTPGPVPVPPRVLLAMARPMVGHR-----------SPDFVGIMK-EVLEKLRKVFGTENGD--VVLLSGSGTLAMEA 71 (383)
T ss_pred ceeeeCCCCCCCHHHHHHhcCCCCCCC-----------CHHHHHHHH-HHHHHHHHHhcCCCCc--EEEEcCCcHHHHHH
Confidence 578999999999999999987655433 234445444 4788999999998421 55666789999999
Q ss_pred HHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC-CCcEEEE--eC
Q 015609 233 VYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY-RPKILIC--GG 309 (403)
Q Consensus 233 al~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~-~pklViv--~~ 309 (403)
++.++++|||+|++.. +|.+++++ ...+...| .++..+.+. ++..+|++++++.+++. ..++|.+ +.
T Consensus 72 av~sl~~pgdkVLv~~---nG~FG~R~----~~ia~~~g--~~v~~~~~~-wg~~v~p~~v~~~L~~~~~~~~V~~vH~E 141 (383)
T COG0075 72 AVASLVEPGDKVLVVV---NGKFGERF----AEIAERYG--AEVVVLEVE-WGEAVDPEEVEEALDKDPDIKAVAVVHNE 141 (383)
T ss_pred HHHhccCCCCeEEEEe---CChHHHHH----HHHHHHhC--CceEEEeCC-CCCCCCHHHHHHHHhcCCCccEEEEEecc
Confidence 9999999999999987 45554442 11223333 345555555 36789999999999854 3456544 35
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 310 SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+++|..+|+++|+++|+++|++++||+.-++|... ..++ .+|+++++.+|+|.+|+| |++..++.
T Consensus 142 TSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~-----~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~ 209 (383)
T COG0075 142 TSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEP-----LKVDEWGIDVAITGSQKALGAPPGLAFVAVSER 209 (383)
T ss_pred CcccccCcHHHHHHHHHHcCCEEEEEecccCCCcc-----cchhhcCccEEEecCchhccCCCccceeEECHH
Confidence 67888999999999999999999999998888653 2333 399999999999999999 77776653
No 40
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.79 E-value=4.8e-18 Score=171.35 Aligned_cols=184 Identities=23% Similarity=0.228 Sum_probs=131.3
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh-ccCCCe
Q 015609 165 RAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL-LLPGDR 243 (403)
Q Consensus 165 p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al-l~pGD~ 243 (403)
.+.++++...+.+.+. ......++++|+ +++++||.++ .|.++|||.|+.+++.++ +++||+
T Consensus 5 ~e~~~~v~~~l~s~~~--------~~~g~~~~~fE~----~~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~gde 67 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWL--------STYGPYVEEFEK----EFAEYFGVKY-----AVAVSSGTSALHLALRALGLGPGDE 67 (363)
T ss_dssp HHHHHHHHHHHHHTCC--------SSSSHHHHHHHH----HHHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTTSE
T ss_pred HHHHHHHHHHHHhCCc--------cCCCHHHHHHHH----HHHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcCce
Confidence 3445566666655431 111456778886 4899999887 478899999999999998 789999
Q ss_pred EEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHH
Q 015609 244 IMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQ 323 (403)
Q Consensus 244 VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~ 323 (403)
|+++.+.+.+.. .++... +++++.++++++++.||++++++++.+ ++|.|++. +.+|...|+++|.+
T Consensus 68 Vi~p~~t~~~~~---------~ai~~~--G~~pv~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~-h~~G~~~d~~~i~~ 134 (363)
T PF01041_consen 68 VIVPAYTFPATA---------SAILWA--GAEPVFVDIDPETLNIDPEALEKAITP-KTKAILVV-HLFGNPADMDAIRA 134 (363)
T ss_dssp EEEESSS-THHH---------HHHHHT--T-EEEEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE--GGGB---HHHHHH
T ss_pred EecCCCcchHHH---------HHHHHh--ccEEEEEeccCCcCCcCHHHHHHHhcc-CccEEEEe-cCCCCcccHHHHHH
Confidence 999987653322 123333 467899999999999999999999985 56777664 47788889999999
Q ss_pred HHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCc--CCCcCCceEEEEEeCCC
Q 015609 324 IADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTH--KSLRGPRGGIIFFRRGK 380 (403)
Q Consensus 324 Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StH--KtL~GP~GG~I~~~~~~ 380 (403)
+|+++|++||.|+||+.|....|..... ..|+.++|+| |.+....||+|+++++.
T Consensus 135 ~~~~~~i~lIeD~a~a~g~~~~g~~~G~--~gd~~~fSf~~~K~i~~geGG~v~~~~~~ 191 (363)
T PF01041_consen 135 IARKHGIPLIEDAAQAFGARYKGRPVGS--FGDIAIFSFHPTKIITTGEGGAVVTNDPE 191 (363)
T ss_dssp HHHHTT-EEEEE-TTTTT-EETTEETTS--SSSEEEEESSTTSSS-SSS-EEEEESTHH
T ss_pred HHHHcCCcEEEccccccCceeCCEeccC--CCCceEecCCCCCCCcCCCCeeEEecHHH
Confidence 9999999999999999997554422222 4799999887 98988889999999863
No 41
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=3.6e-18 Score=176.96 Aligned_cols=194 Identities=18% Similarity=0.153 Sum_probs=140.3
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015609 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
-.+..+.+|..+.+.+++... .... .++-++|+ +++..+.+|+ ++++++|++. .|.++||++|+.++
T Consensus 34 ~Pi~~sstf~~~~~~~~~~~~-~~~~-~~~~Y~r~--~~pt~~~le~----~la~l~g~~~-----~v~fsSG~~Ai~~a 100 (437)
T PRK05613 34 LPIYQTTSYVFDSAEHAKQRF-ALED-LGPIYSRL--TNPTVEALEN----RIASLEGGVH-----AVAFASGQAAETAA 100 (437)
T ss_pred CCEeCCCCcccCCHHHHHHhh-cccc-CCceeeCc--cChHHHHHHH----HHHHHhCCCe-----EEEeCCHHHHHHHH
Confidence 457778888888777765522 1111 23334444 5677777775 5999999975 58899999999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--
Q 015609 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS-- 311 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~-- 311 (403)
+.+++++||+||++..+|+++..... ..+.. .++++..++ ++ .|++++++++.+ ++|+|++....
T Consensus 101 l~~ll~~Gd~VI~~~~~y~~t~~~~~-----~~l~~--~Gi~v~~vd-~~----~d~e~l~~~l~~-~tk~V~~e~~~Np 167 (437)
T PRK05613 101 ILNLAGAGDHIVTSPRLYGGTETLFL-----VTLNR--LGIEVTFVE-NP----DDPESWQAAVQP-NTKAFFGETFANP 167 (437)
T ss_pred HHHhcCCCCEEEECCCccHHHHHHHH-----HHHHh--cCeEEEEEC-CC----CCHHHHHHhCCc-cCeEEEEECCCCC
Confidence 99999999999999999887632100 11122 235555554 22 389999999875 58888775443
Q ss_pred CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeC
Q 015609 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRR 378 (403)
Q Consensus 312 ~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~ 378 (403)
.+.++|+++|+++|+++|+++++|++|+.|... .|++ ++|++++|+||++.|+. ||+++.++
T Consensus 168 ~~~v~di~~I~~la~~~gi~livD~t~a~g~~~-----~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~ 233 (437)
T PRK05613 168 QADVLDIPAVAEVAHRNQVPLIVDNTIATAALV-----RPLELGADVVVASLTKFYTGNGSGLGGVLIDGG 233 (437)
T ss_pred CCcccCHHHHHHHHHHcCCeEEEECCCcccccc-----ChHHhCCCEEEeeccceecCCCcceeEEEEecC
Confidence 357899999999999999999999999887542 3444 49999999999987763 67777544
No 42
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.78 E-value=4.4e-18 Score=188.20 Aligned_cols=206 Identities=15% Similarity=0.124 Sum_probs=136.9
Q ss_pred ccCccCcHHH-HHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-ChHHHHHHHHh
Q 015609 158 ASENFVCRAV-MEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPY-SCTSANFAVYT 235 (403)
Q Consensus 158 aSen~~~p~V-~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~-SGT~An~aal~ 235 (403)
|+.+++++.+ .+++..++.+.+ +||++.+..+....+.+|+ ||++++++||+++.+ ..|+|+ ++|+|++++..
T Consensus 41 Aatt~~~~~~V~~~~~~~~~~~~--~np~s~~~~s~~~~~~~e~-aR~~ia~~lga~~~~--~~VvFtsnaT~alnlva~ 115 (805)
T PLN02724 41 AGATLYSESQLEAALADFSSNVY--GNPHSQSDSSMRSSDTIES-ARQQVLEYFNAPPSD--YACVFTSGATAALKLVGE 115 (805)
T ss_pred CCCCCCCHHHHHHHHHHHHhhcc--CCCCcCcchhhhHHHHHHH-HHHHHHHHhCCCccc--eEEEEeCChHHHHHHHHH
Confidence 4456666644 444444444433 6777655555556666765 899999999997643 235666 57889999988
Q ss_pred hh-ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-------CCCCCCH--HHHHHHhc-------
Q 015609 236 GL-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-------QTGYIDY--EKLEEKAM------- 298 (403)
Q Consensus 236 al-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-------~~g~ID~--d~Le~~i~------- 298 (403)
++ +++||+|+++..+|.+.+. +.......| +++..++++. +.+.+|+ ++|+++++
T Consensus 116 ~l~~~~gd~Iv~t~~eH~svl~------~~~~a~~~G--~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~ 187 (805)
T PLN02724 116 TFPWSSESHFCYTLENHNSVLG------IREYALEKG--AAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKRE 187 (805)
T ss_pred HCCCCCCCeEEEeeccccchHH------HHHHHHHcC--CeEEeccchhccccccccccccccchhhhhhhhhhhhcccc
Confidence 88 7899999998888765441 111111223 4455545441 1344544 66776542
Q ss_pred --cCCCcEEEEeC-C-CCCccccHHHHHHHHHHc--------CCEEEEeccccccccccccccCCCCcccEEEEcCcCCC
Q 015609 299 --DYRPKILICGG-S-SYPREWDYGRFRQIADKC--------GAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL 366 (403)
Q Consensus 299 --~~~pklViv~~-s-~~g~~~Di~~I~~Iake~--------Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL 366 (403)
..+++||++.+ + .+|.++|++.|..+++.. ++++++|+||++|.++..+... .+|++++|+||++
T Consensus 188 ~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~---~~Dfl~~S~HK~~ 264 (805)
T PLN02724 188 DDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRY---PADFVVVSFYKIF 264 (805)
T ss_pred ccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhc---CCCEEEEecceec
Confidence 12457887653 3 468999999876666543 3689999999999876432211 3999999999998
Q ss_pred cCCce-EEEEEeCC
Q 015609 367 RGPRG-GIIFFRRG 379 (403)
Q Consensus 367 ~GP~G-G~I~~~~~ 379 (403)
+||.| |+++.+++
T Consensus 265 GgP~G~G~L~vr~~ 278 (805)
T PLN02724 265 GYPTGLGALLVRRD 278 (805)
T ss_pred cCCCCceEEEEehh
Confidence 77998 88888875
No 43
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.77 E-value=8.2e-18 Score=171.19 Aligned_cols=200 Identities=22% Similarity=0.293 Sum_probs=153.4
Q ss_pred cccceeccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccchH-HHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCh
Q 015609 152 KGIELIASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTGNQ-YIDQIENLCFERALKAFDLDSDNWGVNVQPYSC 226 (403)
Q Consensus 152 ~~l~LiaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~-~~~~lE~~arerla~lfg~~~~~~~v~V~~~SG 226 (403)
+.+..++|+||+ +|.+++++...+. +|+.|..|+|...|+. ...+||+ ++++++|.+. .+.|+||
T Consensus 39 ~~~~nf~SNdYLGLa~~~~~~~a~~~~~~-~~g~g~~gsR~i~G~~~~h~~LE~----~lA~f~g~e~-----al~f~SG 108 (388)
T COG0156 39 RKVLNFCSNDYLGLASHPELIEAAKAAIR-RYGVGAGGSRLISGTSDLHVELEE----ELADFLGAEA-----ALLFSSG 108 (388)
T ss_pred ceeEeeeccCcccccCCHHHHHHHHHHHH-HhCCCCCCcCcccCCcHHHHHHHH----HHHHHhCCCc-----EEEEccc
Confidence 456667899998 8999999988764 5677888999888885 4567776 4999999997 4789999
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC-----C
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY-----R 301 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~-----~ 301 (403)
..||.+++.++++++|.|+...+.| .++. ..+.+.+. +++.|. +.|+++||+++++. +
T Consensus 109 y~AN~~~i~~l~~~~dli~~D~lnH------ASii---dG~rls~a--~~~~f~------HnD~~~Le~~l~~~~~~~~~ 171 (388)
T COG0156 109 FVANLGLLSALLKKGDLIFSDELNH------ASII---DGIRLSRA--EVRRFK------HNDLDHLEALLEEARENGAR 171 (388)
T ss_pred chhHHHHHHHhcCCCcEEEEechhh------hhHH---HHHHhCCC--cEEEec------CCCHHHHHHHHHhhhccCCC
Confidence 9999999999999999999988764 3332 12344432 445554 37899999999763 1
Q ss_pred CcEEEEeC--CCCCccccHHHHHHHHHHcCCEEEEeccccccccccc---ccc-CCC--CcccEEEEcCcCCCcCCceEE
Q 015609 302 PKILICGG--SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAK---ELA-SPF--DYCDIVTSTTHKSLRGPRGGI 373 (403)
Q Consensus 302 pklViv~~--s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g---~~~-~p~--~~aDivt~StHKtL~GP~GG~ 373 (403)
+++|+++. |..|.+.|+++|.++|++||++|+||.||+.|++... ... .-+ ..+|++++|+.|+| |-.||+
T Consensus 172 ~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAl-Gs~Gg~ 250 (388)
T COG0156 172 RKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKAL-GSSGGY 250 (388)
T ss_pred ceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhh-cccCce
Confidence 45666652 4456778999999999999999999999999998732 211 111 13699999999998 567899
Q ss_pred EEEeCC
Q 015609 374 IFFRRG 379 (403)
Q Consensus 374 I~~~~~ 379 (403)
+.+...
T Consensus 251 v~g~~~ 256 (388)
T COG0156 251 IAGSAA 256 (388)
T ss_pred eeCcHH
Confidence 988764
No 44
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.77 E-value=1.8e-18 Score=169.60 Aligned_cols=165 Identities=21% Similarity=0.189 Sum_probs=118.5
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec
Q 015609 202 CFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV 281 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v 281 (403)
++++++++||++. +.+.++++|.||.+++.++++|||+|++....|.++. ..+...|.....++...
T Consensus 64 ~~~~~A~~~ga~~----~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~---------~~~~~~g~~~~~v~~~~ 130 (294)
T cd00615 64 AQELAARAFGAKH----TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVI---------NGLVLSGAVPVYLKPER 130 (294)
T ss_pred HHHHHHHHhCCCC----EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHH---------HHHHHCCCEEEEecCcc
Confidence 5677999999986 3344556678999999999999999999987754432 12344454333333222
Q ss_pred CCC---CCCCCHHHHHHHhcc-CCCcEEEEeCCC-CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCC-C-c
Q 015609 282 NPQ---TGYIDYEKLEEKAMD-YRPKILICGGSS-YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF-D-Y 354 (403)
Q Consensus 282 d~~---~g~ID~d~Le~~i~~-~~pklViv~~s~-~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~-~-~ 354 (403)
+.+ .+.+|++++++++++ .++++|++..++ +|...|+++|.++|+++|+++++|+||+.++...+..+... . .
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~ 210 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAG 210 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcC
Confidence 221 147999999999975 357877765444 57889999999999999999999999997654333222222 1 4
Q ss_pred ccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 355 CDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 355 aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+|++++|+||+|+||++ |++..++.
T Consensus 211 ~div~~S~hK~l~g~~~~~~l~~~~~ 236 (294)
T cd00615 211 ADIVVQSTHKTLPALTQGSMIHVKGD 236 (294)
T ss_pred CcEEEEchhcccchHhHHHHHHhCCC
Confidence 89999999999999875 66666554
No 45
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.77 E-value=2.2e-17 Score=167.02 Aligned_cols=187 Identities=20% Similarity=0.188 Sum_probs=135.4
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh-ccCC
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL-LLPG 241 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al-l~pG 241 (403)
+.+..++++...+...+ +.. .....++| +.+++++|+++ .|.++|||+|+.+++.++ +++|
T Consensus 8 ~~~~~~~~v~~~~~~~~--------~~~-g~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~G 69 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDF--------LTQ-GPTVPAFE----EALAEYVGAKY-----AVAFNSATSALHIACLALGVGPG 69 (380)
T ss_pred CCHHHHHHHHHHHhcCC--------ccC-ChhHHHHH----HHHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCCC
Confidence 34455666665554321 111 23344554 46999999976 367789999999999998 8999
Q ss_pred CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc---CCCcEEEEeCCCCCccccH
Q 015609 242 DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD---YRPKILICGGSSYPREWDY 318 (403)
Q Consensus 242 D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~---~~pklViv~~s~~g~~~Di 318 (403)
|+|+++...|.+.. ..+...| .+++.++++++++.+|++++++++++ .++++|++.. .+|...|+
T Consensus 70 d~Viv~~~~~~~~~---------~~~~~~G--~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~-~~G~~~~~ 137 (380)
T TIGR03588 70 DRVWTTPITFVATA---------NCALYCG--AKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD-FAGKSVDM 137 (380)
T ss_pred CEEEeCCcchHHHH---------HHHHHcC--CEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC-CCCccCCH
Confidence 99999987754332 1223334 46777788766788999999999973 3678777543 46888999
Q ss_pred HHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCc--CCCcCCceEEEEEeCC
Q 015609 319 GRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTH--KSLRGPRGGIIFFRRG 379 (403)
Q Consensus 319 ~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StH--KtL~GP~GG~I~~~~~ 379 (403)
++|.++|+++|+++++|++|+.|....+.......++|++++|+| |++.++.||+++++++
T Consensus 138 ~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~ 200 (380)
T TIGR03588 138 QAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDE 200 (380)
T ss_pred HHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEEecCCCCcccccCceEEEECCH
Confidence 999999999999999999999996532211011124699999998 8998889999999765
No 46
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.77 E-value=2.5e-17 Score=167.29 Aligned_cols=185 Identities=16% Similarity=0.139 Sum_probs=137.7
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh-ccCC
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL-LLPG 241 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al-l~pG 241 (403)
+.+..++++...+...+ ++. .+...++|+ ++++++|+++ .|.++|||+|+.+++.++ +++|
T Consensus 12 ~~~~e~~~~~~~l~~~~--------~~~-g~~~~~le~----~la~~~g~~~-----~v~~~sgt~al~lal~al~~~~G 73 (379)
T PRK11658 12 MGDEELAAVKEVLRSGW--------ITT-GPKNQALEQ----AFCQLTGNQH-----AIAVSSATAGMHITLMALGIGPG 73 (379)
T ss_pred CCHHHHHHHHHHHHcCC--------ccC-CHhHHHHHH----HHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCC
Confidence 45566777766664322 111 234566665 5899999976 367789999999999999 8999
Q ss_pred CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHH
Q 015609 242 DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRF 321 (403)
Q Consensus 242 D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I 321 (403)
|+|+++...|.+.. ..+...| .+++.+++++++..+|++++++++.+ ++|+|+... .+|...|+++|
T Consensus 74 d~Viv~~~~~~~~~---------~~~~~~G--~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~~~~-~~G~~~d~~~i 140 (379)
T PRK11658 74 DEVITPSLTWVSTL---------NMIVLLG--ATPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIPVH-YAGAPADLDAI 140 (379)
T ss_pred CEEEECCCcHHHHH---------HHHHHcC--CEEEEEecCCCcCCcCHHHHHHhccc-CCeEEEEeC-CCCCcCCHHHH
Confidence 99999987765432 1233334 46677777766677999999999874 688877543 47888999999
Q ss_pred HHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 322 RQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 322 ~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
.++|+++|+++++|+||+.|....+.....+ .+++++++.+|.|.++.||+++++++
T Consensus 141 ~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~-g~~~~Sf~~~K~l~~g~GG~v~~~~~ 197 (379)
T PRK11658 141 RAIGERYGIPVIEDAAHAVGTYYKGRHIGAR-GTAIFSFHAIKNITCAEGGLVVTDDD 197 (379)
T ss_pred HHHHHHcCCeEEEECCCccCCeECCeecCCC-CCEEEeCCCCCcCcccCceEEEECCH
Confidence 9999999999999999999976544222222 25778888889999999999998764
No 47
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=1.2e-17 Score=172.81 Aligned_cols=191 Identities=18% Similarity=0.194 Sum_probs=134.6
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015609 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
..+..+.+|..+..-+ +...+..+ ..++.++|+ +++.++++|+ ++++++|+++ .+.+.|||+|++++
T Consensus 29 ~pi~~sst~~~~~~~~-~~~~~~~~-~~~~~y~R~--~~p~~~~le~----~lA~l~g~~~-----av~~sSGt~Al~~a 95 (433)
T PRK08134 29 VPIHLTTSFVFRDSDH-AAALFNLE-RAGHVYSRI--SNPTVAVLEE----RVAALEGGVG-----AIATASGQAALHLA 95 (433)
T ss_pred CCccCCCccccCCHHH-HHHhhccc-ccCceeecC--cChHHHHHHH----HHHHHhCCCc-----EEEeCCHHHHHHHH
Confidence 3455666665444322 22222111 123444454 5677777775 5899999987 37788999999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC-
Q 015609 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY- 312 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~- 312 (403)
+.+++++||+|+++..+|++... .+ ...+...++++..++++ |++++++++.+ ++|+|++...++
T Consensus 96 l~~ll~~Gd~Vi~~~~~y~~t~~--~~-----~~~l~~~Gi~v~~vd~~------d~~~l~~~i~~-~TklV~~e~~~np 161 (433)
T PRK08134 96 IATLMGAGSHIVASSALYGGSHN--LL-----HYTLRRFGIETTFVKPG------DIDGWRAAIRP-NTRLLFGETLGNP 161 (433)
T ss_pred HHHHhCCCCEEEEeCCccHHHHH--HH-----HHHHhhCCeEEEEECCC------CHHHHHHhcCC-CCeEEEEECCCcc
Confidence 99999999999999988876531 00 00011223556665542 79999999975 689988875444
Q ss_pred -CccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEE
Q 015609 313 -PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFF 376 (403)
Q Consensus 313 -g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~ 376 (403)
+.++|+++|+++|+++|+++++|++|+.|... .|++ ++|++++|+||+++|+. ||+++.
T Consensus 162 ~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~-----~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~ 225 (433)
T PRK08134 162 GLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLL-----RPFEHGADLVYHSATKFLGGHGTAIGGVLVD 225 (433)
T ss_pred cCcccCHHHHHHHHHHcCCEEEEECCCcccccC-----CchhcCCCEEEeccccccCCCCCceEEEEEe
Confidence 47899999999999999999999999988652 4555 49999999999987765 466553
No 48
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.76 E-value=1.4e-17 Score=170.05 Aligned_cols=208 Identities=15% Similarity=0.125 Sum_probs=133.5
Q ss_pred cccee-ccCccCcHHHHHHHHHHhhhcCCCCCCCCccccch-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CChHHH
Q 015609 153 GIELI-ASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGN-QYIDQIENLCFERALKAFDLDSDNWGVNVQP-YSCTSA 229 (403)
Q Consensus 153 ~l~Li-aSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~-~~~~~lE~~arerla~lfg~~~~~~~v~V~~-~SGT~A 229 (403)
.+.|- ++..++++.|.+++..++.. +..+..++ ++.|. .+.. +++ .++++ +++|++++ +|.+ .|+|++
T Consensus 28 ~iyld~~a~g~~p~~v~~a~~~~~~~-~~~~~~~~-~~~~~~~~~~-~~~-~~~~~-~l~g~~~~----~v~~~~~~t~~ 98 (406)
T TIGR01814 28 VIYLDGNSLGLMPKAARNALKEELDK-WAKIAIRG-HNTGKAPWFT-LDE-SLLKL-RLVGAKED----EVVVMNTLTIN 98 (406)
T ss_pred cEEecCCCcCcCcHHHHHHHHHHHHH-HHHhhhcc-CccCCCChhh-hhh-hhccc-cccCCCCC----cEEEeCCchHH
Confidence 35555 56667899999999876643 32211112 22221 1222 222 23345 89999875 3444 467889
Q ss_pred HHHHHhhhccCCC---eEEecCCCCCccccccccCCccchhhhcccceE--EeeeecCCCCCCCCHHHHHHHhcc--CCC
Q 015609 230 NFAVYTGLLLPGD---RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFE--SFPYKVNPQTGYIDYEKLEEKAMD--YRP 302 (403)
Q Consensus 230 n~aal~all~pGD---~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~--vv~~~vd~~~g~ID~d~Le~~i~~--~~p 302 (403)
+++++.+++++|+ .|++...+|.+.+.. +...+...|..+. .+.+..+ +.+.+|+++++++++. .++
T Consensus 99 l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~-----~~~~~~~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~t 172 (406)
T TIGR01814 99 LHLLLASFYKPTPKRYKILLEAKAFPSDHYA-----IESQLQLHGLTVEESMVQIEPR-EEETLRLEDILDTIEKNGDDI 172 (406)
T ss_pred HHHHHHHhcCCcCCccEEEecCCCCChHHHH-----HHHHHHhcCCCcccceEEeccC-CCCccCHHHHHHHHHhcCCCe
Confidence 9999999877653 577777776553210 0001122233221 1334443 2578899999998853 357
Q ss_pred cEEEEeCC--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCceEEEEEeC
Q 015609 303 KILICGGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGGIIFFRR 378 (403)
Q Consensus 303 klViv~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~GG~I~~~~ 378 (403)
++|++... ..|..+|+++|.++|+++|+++++|++|++|.++.++.. ..+|++++|+||||+||+||+++..+
T Consensus 173 ~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~---~gvD~~~~s~hK~l~g~pG~~l~v~~ 247 (406)
T TIGR01814 173 AVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHD---WGVDFACWCTYKYLNAGPGAGAFVHE 247 (406)
T ss_pred EEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCccccccc---CCCCEEEEcCccccCCCCCeEEEEeh
Confidence 88876543 358899999999999999999999999999987543211 14999999999999877776655544
No 49
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.75 E-value=4.4e-17 Score=164.77 Aligned_cols=184 Identities=15% Similarity=0.170 Sum_probs=127.5
Q ss_pred cCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc
Q 015609 159 SENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL 238 (403)
Q Consensus 159 Sen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all 238 (403)
+-++++++|+++|...+.+ | + + .+.+.+.++++++++||++. .+++.++|+|+++++.+++
T Consensus 21 g~s~~~~~v~~a~~~~~~~-~---------~-~---~~~~~~~~~~~~a~~~g~~~-----~~~~~g~t~al~~al~al~ 81 (363)
T TIGR01437 21 GVSTVSDEVADAQKRGAQN-Y---------F-E---IKELVNKTGEYIANLLGVED-----AVIVSSASAGIAQSVAAVI 81 (363)
T ss_pred CCCCCCHHHHHHHHHHHhc-C---------C-C---HHHHHHHHHHHHHHhhCCCe-----EEEEcCHHHHHHHHHHHHh
Confidence 4567899999999876533 2 1 1 12333346778999999875 3667789999999999999
Q ss_pred cCCC---------------eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCc
Q 015609 239 LPGD---------------RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPK 303 (403)
Q Consensus 239 ~pGD---------------~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pk 303 (403)
++|| +|+++. +|.-++. .++...+.+.| .++++++++ +.+|++++++++.+ +++
T Consensus 82 ~~Gd~~~~~~~~~s~~~~~eVi~~~-~~~~~~~----~~~~~~~~~~g--~~~v~v~~~---~~~d~~~le~ai~~-~t~ 150 (363)
T TIGR01437 82 TRGNRYLVENLHDSKIEVNEVVLPK-GHNVDYG----APVETMVRLGG--GKVVEAGYA---NECSAEQLEAAITE-KTA 150 (363)
T ss_pred cCCCcchhhcccccccccceEEEEC-ccchhcC----CchHHHHHhcC--CeEEEEcCC---CCCCHHHHHHhcCh-hce
Confidence 9999 555543 2211110 00001122233 345555543 46999999999975 678
Q ss_pred EEEE-e-CCC-CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCceEEEEEeC
Q 015609 304 ILIC-G-GSS-YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPRGGIIFFRR 378 (403)
Q Consensus 304 lViv-~-~s~-~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~GG~I~~~~ 378 (403)
+|++ . .++ +|.++|+++|.++|+++|+++++|++|...+ ..... .+|++++|+||+|+||++|+++.++
T Consensus 151 ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g~D~~~~S~~K~l~gp~~G~l~~~~ 223 (363)
T TIGR01437 151 AILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLGADLVIYSGAKAIEGPTSGLVLGKK 223 (363)
T ss_pred EEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch------HHHHHcCCCEEEEeCCcccCCCceEEEEEcH
Confidence 6653 3 233 5678999999999999999999999997321 11111 3899999999999999999988754
No 50
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=2.2e-17 Score=169.05 Aligned_cols=166 Identities=12% Similarity=0.047 Sum_probs=126.6
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCC
Q 015609 183 YPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTP 262 (403)
Q Consensus 183 ~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~ 262 (403)
+-++|+ |+++.+.||+ +++++.|++. .+.+.||+.|+.+++.+++++||+|++....|++...- +
T Consensus 54 ~~YsR~--~nPt~~~le~----~la~LEg~~~-----a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l--~-- 118 (395)
T PRK08114 54 LFYGRR--GTLTHFSLQE----AMCELEGGAG-----CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDF--C-- 118 (395)
T ss_pred ccccCC--CChhHHHHHH----HHHHHhCCCe-----EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHH--H--
Confidence 445555 7899999987 4889999886 47788999999999999999999999988777665321 0
Q ss_pred ccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcC--CEEEEeccc
Q 015609 263 GGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCG--AVLMCDMAH 338 (403)
Q Consensus 263 ~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~G--a~LivDaAh 338 (403)
+. .+...++++..++ ..|++++++++++ ++|+|+++..++ +.+.|+++|+++||++| ++++||++|
T Consensus 119 --~~-~l~~~Gi~v~~vd------~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~ 188 (395)
T PRK08114 119 --SK-ILSKLGVTTTWFD------PLIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTW 188 (395)
T ss_pred --HH-HHHhcCcEEEEEC------CCCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCC
Confidence 00 0111234455543 2578999999875 689999886554 57899999999999985 999999999
Q ss_pred cccccccccccCCCCc-ccEEEEcCcCCCcCCc---eEEEEEeC
Q 015609 339 ISGLIAAKELASPFDY-CDIVTSTTHKSLRGPR---GGIIFFRR 378 (403)
Q Consensus 339 ~~Glia~g~~~~p~~~-aDivt~StHKtL~GP~---GG~I~~~~ 378 (403)
+.|.. ..|+++ ||++++|+||+|.||. +|+++.++
T Consensus 189 a~p~~-----~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~ 227 (395)
T PRK08114 189 AAGVL-----FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANA 227 (395)
T ss_pred ccccc-----cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCH
Confidence 98864 356664 9999999999999995 57666554
No 51
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.74 E-value=5.3e-17 Score=162.75 Aligned_cols=196 Identities=15% Similarity=0.091 Sum_probs=139.9
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceE-EeCChHHHHHH
Q 015609 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNV-QPYSCTSANFA 232 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V-~~~SGT~An~a 232 (403)
+.|+|++..+++.|+++|...+ .. ...++.+.+++ +++.+++++|+++.. ..| ++.|||.++.+
T Consensus 7 ~~~~pgP~~~~~~~~~a~~~~~-~~-----------~~~~~~~~~~~-~~~~l~~l~~~~~~~--~~i~~~~~gt~~l~~ 71 (368)
T PRK13479 7 LLLTPGPLTTSRTVREAMLRDW-GS-----------WDDDFNALTAS-VRAKLVAIATGEEGY--TCVPLQGSGTFSVEA 71 (368)
T ss_pred eeecCCCCCCCHHHHHHhCCCC-CC-----------CChHHHHHHHH-HHHHHHHHhCCCCCc--eEEEEcCCcHHHHHH
Confidence 4589999999999999987543 11 12334455554 789999999996421 224 45689999999
Q ss_pred HHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC-CCcEEEEeCC-
Q 015609 233 VYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY-RPKILICGGS- 310 (403)
Q Consensus 233 al~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~-~pklViv~~s- 310 (403)
++.+++.+||+|++....+.+. .. ...+...| .+++.+++++ ++.+|++++++++++. ++++|++...
T Consensus 72 ~~~~l~~~~~~vlv~~~~~~~~---~~----~~~~~~~g--~~~~~i~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 141 (368)
T PRK13479 72 AIGSLVPRDGKVLVPDNGAYGA---RI----AQIAEYLG--IAHVVLDTGE-DEPPDAAEVEAALAADPRITHVALVHCE 141 (368)
T ss_pred HHHhccCCCCeEEEEeCCchHH---HH----HHHHHHcC--CcEEEEECCC-CCCCCHHHHHHHHHhCCCCcEEEEEccc
Confidence 9999999999998876432221 00 01122234 3444555543 4679999999998643 3456655443
Q ss_pred -CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 311 -SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 311 -~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+|...|+++|.++|+++|+++++|++|..|..+. ++. .+|++++++||+|+||.| |+++.+++
T Consensus 142 ~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~-----~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~ 209 (368)
T PRK13479 142 TTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPI-----DIAELGIDALISSANKCIEGVPGFGFVIARRS 209 (368)
T ss_pred CccccccCHHHHHHHHHHcCCEEEEEcccccCCccc-----cccccCceEEEecCccccccCCCceEEEECHH
Confidence 35788999999999999999999999998886432 222 389999999999999998 88888764
No 52
>PRK07179 hypothetical protein; Provisional
Probab=99.74 E-value=7.6e-17 Score=164.55 Aligned_cols=199 Identities=17% Similarity=0.182 Sum_probs=143.3
Q ss_pred cccceeccCccC----cHHHHHHHHHHhhhcCCCCCC--CCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC
Q 015609 152 KGIELIASENFV----CRAVMEALGSHLTNKYSEGYP--GARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYS 225 (403)
Q Consensus 152 ~~l~LiaSen~~----~p~V~eA~~s~l~~~y~eG~p--gsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~S 225 (403)
..+..+.|++|+ .|+|++++...+.. |. +++ ++.+..|.+...++|+ ++++++|.+. .++++|
T Consensus 54 ~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~-~~-~~~~~s~~~~~~~~~~~~le~----~la~~~g~~~-----~~~~~s 122 (407)
T PRK07179 54 PDAIILQSNDYLNLSGHPDIIKAQIAALQE-EG-DSLVMSAVFLHDDSPKPQFEK----KLAAFTGFES-----CLLCQS 122 (407)
T ss_pred CcEEEeecCCccCCCCCHHHHHHHHHHHHH-hC-CCCCccccccCCchHHHHHHH----HHHHHhCCCc-----EEEECC
Confidence 446667889998 79999999988754 42 222 3455556566667764 5999999976 367889
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEE
Q 015609 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklV 305 (403)
|++||.+++.++..+||+|++....|.+.. ..+...+ .++.+++ .+|+++|++++++.++++|
T Consensus 123 G~~An~~~l~~l~~~g~~v~~~~~~h~s~~---------~~~~~~g--~~~~~~~------~~d~~~l~~~l~~~~~~lV 185 (407)
T PRK07179 123 GWAANVGLLQTIADPNTPVYIDFFAHMSLW---------EGVRAAG--AQAHPFR------HNDVDHLRRQIERHGPGII 185 (407)
T ss_pred HHHHHHHHHHHhCCCCCEEEEECCcCHHHH---------HHHHHCC--CeEEEec------CCCHHHHHHHHHhcCCeEE
Confidence 999999999999999999998776543221 1122223 2334432 3699999999976557888
Q ss_pred EEeCC--CCCccccHHHHHHHHHHcCCEEEEeccccccccccc---cc-cCCCC-cccEEEEcCcCCCcCCceEEEEEeC
Q 015609 306 ICGGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAK---EL-ASPFD-YCDIVTSTTHKSLRGPRGGIIFFRR 378 (403)
Q Consensus 306 iv~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g---~~-~~p~~-~aDivt~StHKtL~GP~GG~I~~~~ 378 (403)
++... ..|.++|+++|.++|+++|++|++|++|+.|..... .. ..++. .+|++++|+||+++ +++|++++++
T Consensus 186 ~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~~~G~l~~~~ 264 (407)
T PRK07179 186 VVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-GRAGIITCPR 264 (407)
T ss_pred EECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-ccCeEEEeCH
Confidence 77643 357899999999999999999999999998764321 11 11111 37999999999985 5689998875
Q ss_pred C
Q 015609 379 G 379 (403)
Q Consensus 379 ~ 379 (403)
+
T Consensus 265 ~ 265 (407)
T PRK07179 265 E 265 (407)
T ss_pred H
Confidence 4
No 53
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.73 E-value=1.3e-16 Score=157.95 Aligned_cols=156 Identities=20% Similarity=0.162 Sum_probs=120.4
Q ss_pred HHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh-ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec
Q 015609 203 FERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV 281 (403)
Q Consensus 203 rerla~lfg~~~~~~~v~V~~~SGT~An~aal~al-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v 281 (403)
++.++++||.+. .++++|||+|+.+++.++ +++||+|+++...|.+.. ..+...| ++++.+++
T Consensus 24 ~~~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~---------~~~~~~g--~~~~~~~~ 87 (352)
T cd00616 24 EKAFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATA---------NAILLLG--ATPVFVDI 87 (352)
T ss_pred HHHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH---------HHHHHcC--CeEEEEec
Confidence 346999999864 466779999999999998 689999999987764332 1223333 56677777
Q ss_pred CCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEE
Q 015609 282 NPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTS 360 (403)
Q Consensus 282 d~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~ 360 (403)
+++++.+|++++++++. .++++|++.. .+|...|+++|.++|+++|+++++|++|+.|....+. ++. .+|+.++
T Consensus 88 ~~~~~~~d~~~l~~~i~-~~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~---~~~~~~d~~~~ 162 (352)
T cd00616 88 DPDTYNIDPELIEAAIT-PRTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGR---KVGTFGDAGAF 162 (352)
T ss_pred CCCcCCcCHHHHHHhcC-cCCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCE---EcccCcceeEE
Confidence 75568899999999885 4688887753 5788899999999999999999999999999764332 122 3688888
Q ss_pred cCc--CCCcCCceEEEEEeCC
Q 015609 361 TTH--KSLRGPRGGIIFFRRG 379 (403)
Q Consensus 361 StH--KtL~GP~GG~I~~~~~ 379 (403)
|+| |+|+++.||+++++++
T Consensus 163 S~~~~K~~~~~~gg~~~~~~~ 183 (352)
T cd00616 163 SFHPTKNLTTGEGGAVVTNDE 183 (352)
T ss_pred cCCCCCCCcccCceEEEECCH
Confidence 866 9998888999988764
No 54
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.73 E-value=1.5e-16 Score=165.59 Aligned_cols=196 Identities=16% Similarity=0.194 Sum_probs=130.6
Q ss_pred cCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc
Q 015609 159 SENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL 238 (403)
Q Consensus 159 Sen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all 238 (403)
+..+++++|++++...+.+ |. +....+..|. ....++ .+++++++++|+++ .+.++||+.|+++++. .+
T Consensus 89 g~s~l~~~vieAv~~~~~~-y~--~l~~~l~~g~-~g~r~~-~le~~lA~l~gae~-----alvv~sg~aAi~l~l~-~l 157 (454)
T TIGR00474 89 GRAPLAEEAIEAVTDAARG-YS--NLEYDLETGK-RGSRYS-HVEGLLCELTGAED-----ALVVNNNAAAVLLALN-TL 157 (454)
T ss_pred CCCCCCHHHHHHHHHHHhc-cc--chhccccccc-cchHHH-HHHHHHHHHhCCCc-----EEEECCHHHHHHHHHH-Hh
Confidence 3456799999999877754 42 2110010011 011122 24567999999987 3668899999998884 47
Q ss_pred cCCCeEEecCCCC---CccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe-CCCC--
Q 015609 239 LPGDRIMGLDSPS---GGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG-GSSY-- 312 (403)
Q Consensus 239 ~pGD~VL~~~~eh---gghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~-~s~~-- 312 (403)
.+||+|++++.+| ||.+.. ++ .+...| .+++.++.+ ...|++++++++.+ ++++|++. .+++
T Consensus 158 ~~GdeVIvs~~e~v~~ggs~~i----~~--~~~~~G--~~~~~v~~~---~~~~l~dle~aI~~-~T~lv~~~h~sN~~~ 225 (454)
T TIGR00474 158 AKGKEVIVSRGELVEIGGSFRI----PD--VMEQSG--AKLVEVGTT---NRTHLKDYEDAITE-NTALLLKVHTSNYRI 225 (454)
T ss_pred CCcCEEEECCChhhhhcchhhH----HH--HHHHcC--CEEEEeCCC---CCCCHHHHHHhcCc-CCEEEEEEccCcccc
Confidence 8999999998763 443221 11 122233 455555543 34689999999875 57887654 4454
Q ss_pred -C--ccccHHHHHHHHHHcCCEEEEeccccccccc---------cccccCCCC-cccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 313 -P--REWDYGRFRQIADKCGAVLMCDMAHISGLIA---------AKELASPFD-YCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 313 -g--~~~Di~~I~~Iake~Ga~LivDaAh~~Glia---------~g~~~~p~~-~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
| ...|+++|+++||++|+++++|++ +|.+. .+....+.+ ++|++++|+||+|+||.+|+|+++++
T Consensus 226 ~G~~~~~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~~ 303 (454)
T TIGR00474 226 VGFTEEVSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKKE 303 (454)
T ss_pred cCCCCCCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECHH
Confidence 3 378999999999999999999975 44331 111112333 49999999999999999999998874
No 55
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.73 E-value=1.3e-16 Score=160.04 Aligned_cols=197 Identities=15% Similarity=0.095 Sum_probs=136.6
Q ss_pred eeccCccCcHHHHHHHHHHhhhcCCCCCCCC-cccc---chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015609 156 LIASENFVCRAVMEALGSHLTNKYSEGYPGA-RYYT---GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 156 LiaSen~~~p~V~eA~~s~l~~~y~eG~pgs-r~~~---G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
-|-...++.+++++++..+.. .+ +++.. .+.. +.+...+ +++++++++|++. .+++.++++|+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~----l~~~la~~~g~~~-----i~~~~g~t~al~ 73 (361)
T cd06452 6 PIQRGGRLTPEARKALIEWGD-GY--SVCDFCRGRLDEIEKPPIKD----FHHDLAEFLGMDE-----ARVTPGAREGKF 73 (361)
T ss_pred hhhcCCCCCHHHHHHHHHHhc-cc--CCccccccccccccCchHHH----HHHHHHHHcCCce-----EEEeCCHHHHHH
Confidence 355678899999999987652 22 33322 1111 1233333 4557999999943 345556888999
Q ss_pred HHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhcc------CCCcE
Q 015609 232 AVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMD------YRPKI 304 (403)
Q Consensus 232 aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~------~~pkl 304 (403)
+++.+++++||+|++....|.+.. ..+...| .+++.++++++ ++.+|++++++++.+ .++++
T Consensus 74 ~~l~~~~~~gd~Vl~~~~~~~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~l 142 (361)
T cd06452 74 AVMHSLCEKGDWVVVDGLAHYTSY---------VAAERAG--LNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPAL 142 (361)
T ss_pred HHHHHhcCCCCEEEEcCCcchHHH---------HHHHhcC--CEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceE
Confidence 999999999999999876654332 1123334 45555666542 247999999998863 25788
Q ss_pred EEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc-eEEEEEeCC
Q 015609 305 LICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR-GGIIFFRRG 379 (403)
Q Consensus 305 Viv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~-GG~I~~~~~ 379 (403)
|++...+ +|...|+++|.++|+++|+++++|+||+.|..+.. ..+ .+|++++|+||+|++|. +|+++++++
T Consensus 143 v~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~----~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~ 217 (361)
T cd06452 143 ALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVS----GKELGADFIVGSGHKSMAASAPIGVLATTEE 217 (361)
T ss_pred EEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCC----HHHcCCCEEEecCCccccCCCCeEEEEECHH
Confidence 8776543 56789999999999999999999999998764311 111 38999999999997554 588887754
No 56
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.73 E-value=6.2e-17 Score=165.29 Aligned_cols=193 Identities=21% Similarity=0.248 Sum_probs=138.7
Q ss_pred ceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHH
Q 015609 155 ELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVY 234 (403)
Q Consensus 155 ~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal 234 (403)
.+..+.+|..+.+.+++..+.... .++.++|+ +++..+++|+ ++++++|++. .+.++||++|+.+++
T Consensus 27 pi~~~~~~~~~~~~~~~~~~~~~~--~~~~y~r~--~~p~~~~le~----~la~l~g~~~-----~v~~ssG~~Ai~~al 93 (390)
T PRK08133 27 ALFLTSSFVFESAAEAAARFAGEE--PGNIYSRF--TNPTVTMFQE----RLAALEGAEA-----CVATASGMAAILAVV 93 (390)
T ss_pred CccCCCCcccCCHHHHHHhhcCCc--CCceeECC--CChHHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHH
Confidence 355667777777777665432221 24556665 4566666654 5899999986 367889999999999
Q ss_pred hhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--C
Q 015609 235 TGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--Y 312 (403)
Q Consensus 235 ~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~ 312 (403)
.+++++||+|++....|++...... ..+...| ++++.+++ .|++++++++++ ++|+|++...+ +
T Consensus 94 ~al~~~Gd~Vi~~~~~y~~t~~~~~-----~~~~~~G--~~v~~vd~------~d~~~l~~~i~~-~tklV~ie~p~Npt 159 (390)
T PRK08133 94 MALLQAGDHVVSSRSLFGSTVSLFE-----KIFARFG--IETTFVDL------TDLDAWRAAVRP-NTKLFFLETPSNPL 159 (390)
T ss_pred HHHhCCCCEEEEccCcchhHHHHHH-----HHHHHcC--cEEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCC
Confidence 9999999999999888776542100 0112223 45555543 278999998864 68998886443 5
Q ss_pred CccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCC---ceEEEEEeCC
Q 015609 313 PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGP---RGGIIFFRRG 379 (403)
Q Consensus 313 g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP---~GG~I~~~~~ 379 (403)
|.+.|+++|.++|+++|+++++|++++.+.. ..|+. .+|++++|+||++.|+ .||+|+.+++
T Consensus 160 G~v~dl~~I~~la~~~gi~livD~t~~~~~~-----~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~ 225 (390)
T PRK08133 160 TELADIAALAEIAHAAGALLVVDNCFCTPAL-----QQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKE 225 (390)
T ss_pred CCcCCHHHHHHHHHHcCCEEEEECCCccccc-----CCchhhCCcEEEeecceeecCCcceEeEEEEcCHH
Confidence 6789999999999999999999999877643 23444 4899999999999765 3688887654
No 57
>PRK04311 selenocysteine synthase; Provisional
Probab=99.72 E-value=5.3e-16 Score=161.88 Aligned_cols=196 Identities=16% Similarity=0.195 Sum_probs=130.3
Q ss_pred cCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc
Q 015609 159 SENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL 238 (403)
Q Consensus 159 Sen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all 238 (403)
+..+++++|++++..++.+ |. +.......|. ....++ .+++.+++++|++. .+.++||+.|+++++.+ +
T Consensus 94 g~s~l~~~v~eav~~~~~~-~~--~le~~l~~g~-~g~r~~-~~e~~lA~l~Gae~-----a~vv~sgtaAl~l~l~~-l 162 (464)
T PRK04311 94 GRALLSEAAIEAVTEAARG-YS--NLEYDLATGK-RGSRDR-ALAALLCALTGAED-----ALVVNNNAAAVLLALNA-L 162 (464)
T ss_pred CCCCCCHHHHHHHHHHHhc-cc--ccccchhhcc-cchHHH-HHHHHHHHHhCCCe-----EEEECCHHHHHHHHHHH-h
Confidence 4466799999999877654 42 1110010011 011222 24567999999986 36788999999998865 6
Q ss_pred cCCCeEEecCCCCC---ccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe-CCCC--
Q 015609 239 LPGDRIMGLDSPSG---GHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG-GSSY-- 312 (403)
Q Consensus 239 ~pGD~VL~~~~ehg---ghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~-~s~~-- 312 (403)
.+||+|++++.++. |.+. .+ ..+...| ++++.++.+ ...+++++++++.+ ++++|++. .+++
T Consensus 163 ~~GdeVIvs~~e~~~~ggs~~----i~--~~~~~~G--~~l~~v~~~---~~t~~~dle~aI~~-~TklV~~vh~sN~~i 230 (464)
T PRK04311 163 AAGKEVIVSRGELVEIGGAFR----IP--DVMRQAG--ARLVEVGTT---NRTHLRDYEQAINE-NTALLLKVHTSNYRI 230 (464)
T ss_pred CCCCEEEEcchhhhhcCcchh----hH--HHHHHCC--cEEEEECCC---CCCCHHHHHHhcCc-cCeEEEEEcCCCccc
Confidence 89999999986542 2211 11 1122233 455555543 35689999999975 58887654 4453
Q ss_pred ---CccccHHHHHHHHHHcCCEEEEeccccccccc---------cccccCCCC-cccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 313 ---PREWDYGRFRQIADKCGAVLMCDMAHISGLIA---------AKELASPFD-YCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 313 ---g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia---------~g~~~~p~~-~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
+...|+++|+++||++|+++++|+++ |.+. .+....+++ ++|++++|+||+|+||.+|+|+++++
T Consensus 231 ~G~~~~~dl~eI~~lak~~gi~vivD~gs--G~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~ 308 (464)
T PRK04311 231 EGFTKEVSLAELAALGKEHGLPVVYDLGS--GSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKE 308 (464)
T ss_pred cccCCcCCHHHHHHHHHHcCCeEEEECCC--cccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHH
Confidence 34689999999999999999999953 3221 111123333 49999999999999999999998764
No 58
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.72 E-value=1.1e-16 Score=163.38 Aligned_cols=195 Identities=16% Similarity=0.190 Sum_probs=140.5
Q ss_pred eccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccch-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015609 157 IASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTGN-QYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 157 iaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G~-~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
++|++|+ +|+++++....+ .+|+.|+.++|.+.|+ ....++|+ ++++++|.+. .+.++||+.|+.
T Consensus 3 f~s~dyLgl~~~~~~~~~~~~a~-~~~g~~~~~sr~~yg~~~~~~~LE~----~lA~~~g~e~-----al~~~sG~~a~~ 72 (392)
T PLN03227 3 FATHDFLSTSSSPTLRQTALESL-SHYGCGSCGPRGFYGTIDAHLELEQ----CMAEFLGTES-----AILYSDGASTTS 72 (392)
T ss_pred CcCcCccCCCCCHHHHHHHHHHH-HHhCCCCcccccccCChHHHHHHHH----HHHHHhCCCc-----EEEecCcHHHHH
Confidence 5788897 889999988776 4687888887776565 34455554 6999999986 488899999999
Q ss_pred HHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHH---Hhcc---------
Q 015609 232 AVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEE---KAMD--------- 299 (403)
Q Consensus 232 aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~---~i~~--------- 299 (403)
+++.+++++||+|++.+..|++.+. .+.+.+ +.+.+++.+ |++++++ .+..
T Consensus 73 ~~i~~l~~~GD~Vl~~~~~h~s~~~---------~~~l~~--~~~~~~~~~------d~~~l~~~~~~i~~~~~a~~~~~ 135 (392)
T PLN03227 73 STVAAFAKRGDLLVVDRGVNEALLV---------GVSLSR--ANVRWFRHN------DMKDLRRVLEQVRAQDVALKRKP 135 (392)
T ss_pred HHHHHhCCCCCEEEEeccccHHHHH---------HHHHcC--CeEEEeCCC------CHHHHHHHHHHhhhhcccccccc
Confidence 9999999999999999977655421 122222 344555432 3444444 3321
Q ss_pred -CCCcEEEEeCC--CCCccccHHHHHHHHHHcCCEEEEecccccccccc---cccc----CCCCcccEEEEcCcCCCcCC
Q 015609 300 -YRPKILICGGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA---KELA----SPFDYCDIVTSTTHKSLRGP 369 (403)
Q Consensus 300 -~~pklViv~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~---g~~~----~p~~~aDivt~StHKtL~GP 369 (403)
.++++|+++.. ..|.+.|+++|.++|+++|+++++|.+|++|.... +... .|...+|++++|.+|++ ||
T Consensus 136 ~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~ 214 (392)
T PLN03227 136 TDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GS 214 (392)
T ss_pred CCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hc
Confidence 24677777643 35778999999999999999999999999775532 1111 23335899999999985 79
Q ss_pred ceEEEEEeCC
Q 015609 370 RGGIIFFRRG 379 (403)
Q Consensus 370 ~GG~I~~~~~ 379 (403)
.||+++++++
T Consensus 215 ~gg~v~~~~~ 224 (392)
T PLN03227 215 VGGMTVGSEE 224 (392)
T ss_pred cCcEEecCHH
Confidence 9999887754
No 59
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.72 E-value=3.4e-16 Score=156.39 Aligned_cols=220 Identities=19% Similarity=0.162 Sum_probs=144.2
Q ss_pred ChHHHHHHHHHHHhhh--cccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC
Q 015609 136 DPEIFDIMEKEKQRQF--KGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD 213 (403)
Q Consensus 136 d~ei~~li~~e~~rq~--~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~ 213 (403)
+.||.+++++-.++.. ..+ |-...++..|.+++++...+...+ +++.. +.+. ..+++.+++.+++++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~--~~~~---~~~~~~~~~~la~~~g~~ 75 (371)
T PRK13520 4 EEEILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETNL--GDPGL--FPGT---AKLEEEAVEMLGELLHLP 75 (371)
T ss_pred HHHHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcCC--CCccc--CccH---HHHHHHHHHHHHHHhCCC
Confidence 4577777765433321 122 444478889999999987765432 34322 2332 334456788999999987
Q ss_pred CCCCcceEEeCChHHHHHHHHhhhcc----CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCC
Q 015609 214 SDNWGVNVQPYSCTSANFAVYTGLLL----PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYID 289 (403)
Q Consensus 214 ~~~~~v~V~~~SGT~An~aal~all~----pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID 289 (403)
.. ..+++.+||+||..++.++.. +||+|+++...|.++ . +.+...|. +++.++++ +++.+|
T Consensus 76 ~~---~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~---~------~~~~~~g~--~~~~v~~~-~~~~~d 140 (371)
T PRK13520 76 DA---YGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSF---D------KAADMLGV--ELRRAPLD-DDYRVD 140 (371)
T ss_pred CC---CeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHH---H------HHHHHcCc--eEEEecCC-CCCcCC
Confidence 64 235566799999998877643 589999988654321 1 22233343 44445555 357899
Q ss_pred HHHHHHHhccCCCcEEE-EeC-CCCCccccHHHHHHHHHHcCCEEEEecccccccccccccc--CCC--CcccEEEEcCc
Q 015609 290 YEKLEEKAMDYRPKILI-CGG-SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPF--DYCDIVTSTTH 363 (403)
Q Consensus 290 ~d~Le~~i~~~~pklVi-v~~-s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~--~~aDivt~StH 363 (403)
+++|++++.+ ++++|+ +.. +.+|...|+++|.++|+++|++|++|++|+.|.++..... ..+ ..+|++++++|
T Consensus 141 ~~~l~~~i~~-~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~ 219 (371)
T PRK13520 141 VKAVEDLIDD-NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPH 219 (371)
T ss_pred HHHHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCc
Confidence 9999999975 455554 333 3568899999999999999999999999987754321111 111 24899999999
Q ss_pred CCCcCCc-eEEEEEeCC
Q 015609 364 KSLRGPR-GGIIFFRRG 379 (403)
Q Consensus 364 KtL~GP~-GG~I~~~~~ 379 (403)
|++.+|. +|+++++++
T Consensus 220 K~~~a~~~~G~~~~~~~ 236 (371)
T PRK13520 220 KMGLAPIPAGGILFRDE 236 (371)
T ss_pred cccCccCCceEEEEcCH
Confidence 9876553 355555443
No 60
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.72 E-value=2.4e-16 Score=138.24 Aligned_cols=162 Identities=26% Similarity=0.291 Sum_probs=115.1
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec
Q 015609 202 CFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV 281 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v 281 (403)
++++++++|+.+.. + + ++..+||.|+.+++.++.++|++|++....|.++.. . .....+ .++..++.
T Consensus 5 ~~~~l~~~~~~~~~-~-~-~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-~-------~~~~~g--~~~~~v~~ 71 (170)
T cd01494 5 LEEKLARLLQPGND-K-A-VFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW-V-------AAELAG--AKPVPVPV 71 (170)
T ss_pred HHHHHHHHcCCCCC-c-E-EEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh-h-------HHHhcC--CEEEEecc
Confidence 56789999954332 1 3 445589999999999999899999999988766641 0 112233 34555665
Q ss_pred CCCCCCC--CHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccE
Q 015609 282 NPQTGYI--DYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDI 357 (403)
Q Consensus 282 d~~~g~I--D~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDi 357 (403)
+. ++.. |.+.+++.+...+++++++..+++ +...|+++|.++|+++|+++++|++|..+.............+|+
T Consensus 72 ~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~ 150 (170)
T cd01494 72 DD-AGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADV 150 (170)
T ss_pred CC-CCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCE
Confidence 53 2333 333665555556788888775543 567789999999999999999999999987654221122235999
Q ss_pred EEEcCcCCCcCCceEEEEEe
Q 015609 358 VTSTTHKSLRGPRGGIIFFR 377 (403)
Q Consensus 358 vt~StHKtL~GP~GG~I~~~ 377 (403)
++.|+||+|++|++|+|++|
T Consensus 151 ~~~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 151 VTFSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred EEEEcccccCCCceEEEEeC
Confidence 99999999998888998864
No 61
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.72 E-value=2e-16 Score=160.93 Aligned_cols=185 Identities=15% Similarity=0.106 Sum_probs=135.6
Q ss_pred cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh-ccC
Q 015609 162 FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL-LLP 240 (403)
Q Consensus 162 ~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al-l~p 240 (403)
.+.++.++++...+...+ +++..+.+.++|+ ++++++|.++ .+.+.|||+|+.+++.++ ++|
T Consensus 8 ~~~~~e~~a~~~~~~~~~--------~~~~g~~~~~~e~----~la~~~g~~~-----~v~~~sgt~aL~~~l~al~~~p 70 (376)
T TIGR02379 8 PVTGQELEYIAEAISEGK--------LSGDGPFSRRCET----WLENRTGTKK-----ALLTPSCTAALEMAALLLDIQP 70 (376)
T ss_pred CCCHHHHHHHHHHHHcCC--------ccCCcHHHHHHHH----HHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCC
Confidence 356666777777665432 1111344566665 4788899876 366778999999998887 899
Q ss_pred CCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHH
Q 015609 241 GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGR 320 (403)
Q Consensus 241 GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~ 320 (403)
||+|+++...|.+.. ..+...| .+++.+++++++..+|+++++++++. ++|+|+... .+|...|+++
T Consensus 71 Gd~Viv~~~t~~~~~---------~~~~~~G--~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~-~~G~~~d~~~ 137 (376)
T TIGR02379 71 GDEVIMPSYTFVSTA---------NAFVLRG--AKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVH-YAGVACDMDT 137 (376)
T ss_pred cCEEEECCCCcHHHH---------HHHHHcC--CEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeC-CCCCccCHHH
Confidence 999999987764432 1233333 56777888876678999999999874 688887543 5688899999
Q ss_pred HHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCC---CcCCceEEEEEeCC
Q 015609 321 FRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKS---LRGPRGGIIFFRRG 379 (403)
Q Consensus 321 I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKt---L~GP~GG~I~~~~~ 379 (403)
|.++|+++|+++++|++|+.|....+. ++. ..|+.++|+|++ ..|++||+|+++++
T Consensus 138 I~~la~~~~i~vIeDaa~~~g~~~~~~---~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~ 197 (376)
T TIGR02379 138 IMALANKHQLFVIEDAAQGVMSTYKGR---ALGSIGHLGTFSFHETKNYTSGGEGGALLINDQ 197 (376)
T ss_pred HHHHHHHCCCEEEEECccccCCccCCc---ccCCCCCEEEEeCCCCCcCcccCCceEEEECCH
Confidence 999999999999999999998643222 222 368888888753 35778999999865
No 62
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.72 E-value=3.8e-17 Score=165.86 Aligned_cols=191 Identities=13% Similarity=0.078 Sum_probs=131.1
Q ss_pred ccceeccCccCcHH-HHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-ChHHHH
Q 015609 153 GIELIASENFVCRA-VMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPY-SCTSAN 230 (403)
Q Consensus 153 ~l~LiaSen~~~p~-V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~-SGT~An 230 (403)
.+.|.++++.++|. |++++...+.. . .+.+.++.+.+++ +|+.++++||++.. + -.++++ |||.++
T Consensus 13 ~~~f~~Gp~~~~~~~v~~a~~~~~~~-----~----~hr~~~f~~~~~~-~r~~l~~l~~~~~~-~-~v~~~~gs~T~~~ 80 (378)
T PRK03080 13 DPRFSSGPCKKRPGWQLEALADALLG-----R----SHRQKPVKALLKR-VIEGTRELLSLPEG-Y-EVGIVPGSDTGAW 80 (378)
T ss_pred CCCcCCCCcCCChHHHHHHHHhhhcc-----c----CcCCHHHHHHHHH-HHHHHHHHhCCCCC-c-eEEEECCchHHHH
Confidence 47789999999999 99999854321 1 1223466666654 89999999998532 1 123344 799999
Q ss_pred HHHHhhhccC-CCeEEecCCCCCccccccccCCccchh-hhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe
Q 015609 231 FAVYTGLLLP-GDRIMGLDSPSGGHLSHGYHTPGGKKV-SAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308 (403)
Q Consensus 231 ~aal~all~p-GD~VL~~~~ehgghlsh~~~~~~~~~v-~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~ 308 (403)
++++.+++++ ++.|++ ..+|+..+. ..+ +..|. .++..++++ +++.+|+++++. +++|.+.
T Consensus 81 ~~~~~~l~~~~~~~vi~-~g~f~~~~~--------~~~~~~~g~-~~v~~~~~~-~g~~~d~~~i~~------~~~V~~~ 143 (378)
T PRK03080 81 EMALWSLLGARRVDHLA-WESFGSKWA--------TDVVKQLKL-EDPRVLEAD-YGSLPDLSAVDF------DRDVVFT 143 (378)
T ss_pred HHHHHhcCCCCcceEEE-eCHHHHHHH--------HHHHhhcCC-CCceEeccC-CCCCCCHhhcCC------CCCEEEE
Confidence 9999999875 455554 455543221 001 12232 034444444 356788887432 3445443
Q ss_pred --CCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 309 --GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 309 --~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+++|..+|+++|++ +++|++++||++|++|.++. .++.+|++++++||||+||.| |+++.+++
T Consensus 144 h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pi-----dv~~iD~~~~s~~K~l~~P~G~g~l~v~~~ 210 (378)
T PRK03080 144 WNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPL-----DWSKLDVYTFSWQKVLGGEGGHGMAILSPR 210 (378)
T ss_pred ecCCccceeccchhhcc--ccCCCeEEEecccccccCCC-----CHHHCcEEEEehhhhCCCCCceEEEEECHH
Confidence 345689999999998 88999999999999998653 233489999999999999998 77777764
No 63
>PRK05939 hypothetical protein; Provisional
Probab=99.72 E-value=1.9e-16 Score=162.25 Aligned_cols=188 Identities=17% Similarity=0.153 Sum_probs=133.5
Q ss_pred ceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHH
Q 015609 155 ELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVY 234 (403)
Q Consensus 155 ~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal 234 (403)
.+..+.+|..+.. +.+...+... ..++.++|+ |++..+.+|+ +++++.|+++ .|.++||+.|+.+++
T Consensus 13 pi~~~~t~~~~~~-~~~~~~~~~~-~~~~~Y~r~--g~p~~~~lE~----~la~leg~~~-----~v~~ssG~~Ai~~~l 79 (397)
T PRK05939 13 PIHTSVTYGYEDA-RDLIDVFQGK-KPGFTYARQ--GTPTTAALEA----KITKMEGGVG-----TVCFATGMAAIAAVF 79 (397)
T ss_pred CccCCCCeecCCH-HHHHHhhcCC-cCCCCcCCC--CCHHHHHHHH----HHHHHhCCCe-----EEEeCCHHHHHHHHH
Confidence 3455566654443 2222222221 123434443 8898988887 4899999987 478889999999999
Q ss_pred hhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--C
Q 015609 235 TGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--Y 312 (403)
Q Consensus 235 ~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~ 312 (403)
.++++|||+|++....|+++.... ..+...| +++..+++ .|++++++++.+ ++|+|++...+ +
T Consensus 80 ~all~~Gd~Vv~~~~~y~~t~~~~------~~l~~~G--~~v~~v~~------~d~e~l~~~l~~-~tklV~vesp~Npt 144 (397)
T PRK05939 80 LTLLRAGDHLVSSQFLFGNTNSLF------GTLRGLG--VEVTMVDA------TDVQNVAAAIRP-NTRMVFVETIANPG 144 (397)
T ss_pred HHHcCCCCEEEECCCccccHHHHH------HHHHhcC--CEEEEECC------CCHHHHHHhCCC-CCeEEEEECCCCCC
Confidence 999999999999998887764211 1122223 44555443 489999999864 68998886543 4
Q ss_pred CccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEE
Q 015609 313 PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIF 375 (403)
Q Consensus 313 g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~ 375 (403)
|.+.|+++|+++|+++|+++++|++|+.+.. ..|.. ++|+++.|+||++.|+. ||+++
T Consensus 145 G~v~dl~~I~~la~~~gi~livD~t~a~~~~-----~~~~~~gaDivv~S~sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 145 TQVADLAGIGALCRERGLLYVVDNTMTSPWL-----FRPKDVGASLVINSLSKYIAGHGNALGGAVT 206 (397)
T ss_pred CCHHhHHHHHHHHHHcCCEEEEECCcccccc-----cCccccCCEEEEecCeecccCCCCeEEEEEe
Confidence 6789999999999999999999999988743 13444 49999999999998764 35444
No 64
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.72 E-value=2.2e-16 Score=156.01 Aligned_cols=195 Identities=23% Similarity=0.272 Sum_probs=135.3
Q ss_pred eccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccc-hHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015609 157 IASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTG-NQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 157 iaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G-~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
+.++.|+ +|+|++++...+.+ |..+..+.+++.| ++...+ .++.+++++|++. .+++++|++++.
T Consensus 6 ~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~----l~~~la~~~~~~~-----~iv~~sg~~a~~ 75 (349)
T cd06454 6 FCSNDYLGLANHPEVIEAAKEALDK-YGVGAGGSRLISGTSDLHEE----LEEELAEFHGKEA-----ALVFSSGYAAND 75 (349)
T ss_pred cccCCccccCCCHHHHHHHHHHHHH-hCCCCCCcCeecCCchHHHH----HHHHHHHHhCCCC-----EEEeccHHHHHH
Confidence 4566675 79999999998864 5433333334434 333333 4557999999875 477889999999
Q ss_pred HHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc----CCCcEEEE
Q 015609 232 AVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD----YRPKILIC 307 (403)
Q Consensus 232 aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~----~~pklViv 307 (403)
+++.+++++||+|++....|.+... .....|. ++++++ .+|++++++++++ .++++|++
T Consensus 76 ~~~~~~~~~gd~Vl~~~~~~~~~~~---------~~~~~g~--~~~~~~------~~~~~~le~~i~~~~~~~~~~~v~~ 138 (349)
T cd06454 76 GVLSTLAGKGDLIISDSLNHASIID---------GIRLSGA--KKRIFK------HNDMEDLEKLLREARRPYGKKLIVT 138 (349)
T ss_pred HHHHHhcCCCCEEEEehhhhHHHHH---------HHHHcCC--ceEEec------CCCHHHHHHHHHHhhccCCCeEEEE
Confidence 9999999999999998876544221 1222332 333332 3688999998875 34677776
Q ss_pred eCC--CCCccccHHHHHHHHHHcCCEEEEeccccccccccc-c----ccCCCCcccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 308 GGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAK-E----LASPFDYCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 308 ~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g-~----~~~p~~~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
... ..|...|+++|.++|+++|+++++|++|+.|..... . .......+|++++|+||+++ ++||+++.+++
T Consensus 139 ~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~gG~i~~~~~ 216 (349)
T cd06454 139 EGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFG-AVGGYIAGSKE 216 (349)
T ss_pred eccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhc-ccCCEEECCHH
Confidence 543 357789999999999999999999999998865321 1 11111247999999999874 57888887654
No 65
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.72 E-value=1.3e-16 Score=163.16 Aligned_cols=168 Identities=23% Similarity=0.236 Sum_probs=127.5
Q ss_pred CCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccC
Q 015609 182 GYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHT 261 (403)
Q Consensus 182 G~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~ 261 (403)
++.++|| |++..+.||+ ++++++|.+. .+++.||++|+.+++.+++++||+|++....|++.....
T Consensus 44 ~~~Y~R~--~npt~~~Le~----~lA~leg~e~-----ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~--- 109 (388)
T PRK08861 44 KYDYTRS--GNPNRGLLEQ----TLSELESGKG-----AVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLF--- 109 (388)
T ss_pred CccccCC--CCchHHHHHH----HHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHH---
Confidence 3445555 6777888876 4899999765 467788999999999999999999999988776643210
Q ss_pred CccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEecccc
Q 015609 262 PGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 262 ~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
.......++++..++ ..|++++++++.+ ++++|+++.+++ |.+.|+++|.++|+++|+++++|++++
T Consensus 110 ----~~~~~~~gi~v~~vd------~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~ 178 (388)
T PRK08861 110 ----NTRANKGDFKVQFVD------QSDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFL 178 (388)
T ss_pred ----HHHHhcCCeEEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcc
Confidence 001111234555543 2589999998875 689998875554 578999999999999999999999998
Q ss_pred ccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 340 SGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 340 ~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.|+. ..|++ ++|++++|+||+++||. ||+++++++
T Consensus 179 ~~~~-----~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~ 217 (388)
T PRK08861 179 TPVL-----QKPLELGADFVIHSTTKYINGHSDVIGGVLITKTK 217 (388)
T ss_pred cccc-----CCCcccCCCEEEeecceeccCCCcceeEEEEecHH
Confidence 8753 34565 49999999999999986 688887654
No 66
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.71 E-value=3.9e-16 Score=154.41 Aligned_cols=195 Identities=19% Similarity=0.162 Sum_probs=137.0
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceE-EeCChHHHHHH
Q 015609 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNV-QPYSCTSANFA 232 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V-~~~SGT~An~a 232 (403)
+.|.|++..+++.|++++...+ +++ ...+.+.+++ .|+++++++|+++.. ..| +..+||+++.+
T Consensus 1 ~~~~p~p~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~-~~~~la~~~~~~~~~--~~i~~~~~gt~~l~~ 65 (355)
T TIGR03301 1 ILLTPGPLSTSATVRDAMLVDW-CHW-----------DSEFNDVTDQ-VRDRLLALAGGDDNH--TCVLLQGSGTFAVEA 65 (355)
T ss_pred CcCcCCCCCCCHHHHHHhhhhc-cCC-----------CHHHHHHHHH-HHHHHHHHhcCCCCC--cEEEEeCCcHHHHHH
Confidence 3578999999999999998632 211 1223344544 688999999998632 234 45689999999
Q ss_pred HHhhhccCCCeEEecCCCCCcc-ccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC-CCcEEEEeC-
Q 015609 233 VYTGLLLPGDRIMGLDSPSGGH-LSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY-RPKILICGG- 309 (403)
Q Consensus 233 al~all~pGD~VL~~~~ehggh-lsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~-~pklViv~~- 309 (403)
++.+++++||+|++....+.+. +. ......| .+++.+++++ ++.+|+++++++++++ +.++|++..
T Consensus 66 ~~~~~~~~~~~vi~~~~~~~~~~~~--------~~a~~~g--~~~~~i~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~ 134 (355)
T TIGR03301 66 TIGSLVPRDGKLLVLINGAYGERLA--------KICEYLG--IPHTDLNFSE-YEPPDLNRIEEALAADPDITHVATVHH 134 (355)
T ss_pred HHHhccCCCCeEEEECCCchhhHHH--------HHHHHcC--CceEEEecCC-CCCCCHHHHHHHHHhCCCceEEEEEec
Confidence 9999999999877655332111 10 1122233 3445555543 4679999999998753 334554432
Q ss_pred -CCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 310 -SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 310 -s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+.+|...|+++|.++|+++|+++++|++|+.|..+. ++. .+|++++|+||+|.||.| |+++.+++
T Consensus 135 ~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~-----~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~ 203 (355)
T TIGR03301 135 ETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPI-----DIEELDVDALIASANKCLEGVPGFGFVIARRD 203 (355)
T ss_pred CCcccchhHHHHHHHHHHHcCCEEEEEeccccCCccc-----chhhcCccEEEecCCcccccCCceeEEEECHH
Confidence 346788999999999999999999999999885431 222 389999999999988887 88887764
No 67
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.71 E-value=5.6e-17 Score=164.97 Aligned_cols=166 Identities=21% Similarity=0.235 Sum_probs=122.1
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCC
Q 015609 183 YPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTP 262 (403)
Q Consensus 183 ~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~ 262 (403)
+.++|+ |++..+++|+ ++++++|++. .+.++||+.|+.+++. ++++||+|++....|++.....
T Consensus 39 ~~Y~r~--~~p~~~~le~----~la~l~g~~~-----~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~---- 102 (378)
T TIGR01329 39 YDYTRS--GNPTRTALES----LLAKLDKADR-----AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLL---- 102 (378)
T ss_pred CccCCC--CChHHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHH----
Confidence 334444 6677777775 5899999965 4778899999888775 7899999999988876543100
Q ss_pred ccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccc
Q 015609 263 GGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHIS 340 (403)
Q Consensus 263 ~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~ 340 (403)
...+...| +++..+++ .|+++++++++ .++|+|+++..+ .+.+.|+++|+++|+++|+++++|++|+.
T Consensus 103 -~~~~~~~G--~~v~~vd~------~d~~~le~~i~-~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~ 172 (378)
T TIGR01329 103 -TQVVPRSG--VVVVHVDT------TDLDKVKAALG-PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMS 172 (378)
T ss_pred -HHHHHHcC--cEEEEeCC------CCHHHHHHhcC-cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcc
Confidence 00111123 44555442 38999999987 468998887544 46789999999999999999999999987
Q ss_pred cccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 341 GLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 341 Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
+.. ..|++ .+|++++|+||+|.||. ||+++++++
T Consensus 173 ~~~-----~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~ 210 (378)
T TIGR01329 173 PLL-----CNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGE 210 (378)
T ss_pred ccc-----CChhhcCCcEEEEecceeccCCccceeEEEEeCcH
Confidence 753 23444 49999999999999975 688888664
No 68
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.71 E-value=2.4e-16 Score=159.21 Aligned_cols=195 Identities=16% Similarity=0.180 Sum_probs=134.0
Q ss_pred CccCcHHHHHHHHHHhhhcCCCCCCCCccccchH---HHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhh
Q 015609 160 ENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQ---YIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTG 236 (403)
Q Consensus 160 en~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~---~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~a 236 (403)
-..+..++.+++.. |..|+.++|...|.. +...+++ .++.+++++|++. + +++++|++||.+++.+
T Consensus 17 ~g~~~~~~~~a~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~-~~e~lA~~~g~~~----~-~i~~g~~~a~~~~~~~ 85 (370)
T TIGR02539 17 GGVLTEAARKALVE-----FGDGYSVCDFCGGRLDQITKPPIHD-FLEDLAEFLGMDE----A-RVTHGAREGKFAVMHA 85 (370)
T ss_pred CCCCcHHHHHHHHH-----HhhccccccccccccccccchHHHH-HHHHHHHHhCCCc----e-EEECChHHHHHHHHHH
Confidence 34456666666654 444566666554432 1112332 3556999999987 3 4577899999999999
Q ss_pred hccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHHHHHhcc------CCCcEEEEeC
Q 015609 237 LLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKLEEKAMD------YRPKILICGG 309 (403)
Q Consensus 237 ll~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~Le~~i~~------~~pklViv~~ 309 (403)
++++||+|++....|.+.+ ..+...| .+++.++.+. .++.+|+++|++++++ .++++|++..
T Consensus 86 l~~~gd~Vl~~~~~h~s~~---------~~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~ 154 (370)
T TIGR02539 86 LCKEGDWVVLDGLAHYTSY---------VAAERAG--LNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTH 154 (370)
T ss_pred hhCCCCEEEECCcccHHHH---------HHHHHcC--CEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEEC
Confidence 9999999999887653322 1233344 3455555542 2467999999999863 2567887654
Q ss_pred C--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCc-eEEEEEeCC
Q 015609 310 S--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPR-GGIIFFRRG 379 (403)
Q Consensus 310 s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~-GG~I~~~~~ 379 (403)
. .+|...|+++|.++|+++|++|++|+||+.|.++.... . .++|+++.|+||+++++. .|+++++++
T Consensus 155 p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~--~-~~~di~v~s~sK~~~~~g~~G~l~~~~~ 224 (370)
T TIGR02539 155 VDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAK--E-IGADFIVGSGHKSMAASGPCGVLGMSEE 224 (370)
T ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHH--H-cCCCEEEeeCcccccCCCCEEEEEECHH
Confidence 3 36788999999999999999999999999985432111 1 138999999999985322 388888764
No 69
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=3.1e-16 Score=162.50 Aligned_cols=194 Identities=18% Similarity=0.151 Sum_probs=133.2
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015609 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
..+..+.+|..+..-+... .+... ..++.++|+ +++..+.||+ ++++++|++. .+.++||+.|+.++
T Consensus 34 ~pi~~sst~~~~~~~~~~~-~~~~~-~~~~~Ysr~--~~p~~~~Le~----~lA~l~g~~~-----av~~sSG~aAi~~a 100 (436)
T PRK07812 34 LPIYQTTSYTFDDTDHAAA-LFGLA-EPGNIYTRI--MNPTQDVVEQ----RIAALEGGVA-----ALLLASGQAAETFA 100 (436)
T ss_pred CCCcCCCCcccCCHHHHHH-hhcCC-cCCccccCC--CCchHHHHHH----HHHHHhCCCe-----EEEEccHHHHHHHH
Confidence 4566667776444332221 11111 112333443 5666777776 5999999987 47888999999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--
Q 015609 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS-- 311 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~-- 311 (403)
+.+++++||+|++....|++... .+ .. .+...++++..++ ++ .|++++++++++ ++++|++...+
T Consensus 101 l~all~~Gd~Vv~~~~~y~~t~~--~~----~~-~l~~~Gi~v~~vd-d~----~d~e~l~~ai~~-~tklV~ie~~sNp 167 (436)
T PRK07812 101 ILNLAGAGDHIVSSPRLYGGTYN--LF----HY-TLPKLGIEVSFVE-DP----DDLDAWRAAVRP-NTKAFFAETISNP 167 (436)
T ss_pred HHHHhCCCCEEEEeCCcchHHHH--HH----HH-HhhcCeEEEEEEC-CC----CCHHHHHHhCCC-CCeEEEEECCCCC
Confidence 99999999999999888766431 00 00 0111234444443 22 389999998874 68888877544
Q ss_pred CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeC
Q 015609 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRR 378 (403)
Q Consensus 312 ~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~ 378 (403)
+|.+.|+++|+++||++|++++||++|+.|.. ..|++ ++|+++.|+||+++|+. ||+++.+.
T Consensus 168 ~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-----~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~ 233 (436)
T PRK07812 168 QIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-----IRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGG 233 (436)
T ss_pred CCeecCHHHHHHHHHHcCCEEEEECCCccccc-----CCchhcCCCEEEEecccccCCCCCeEEEEEEcCC
Confidence 47889999999999999999999999988754 34555 49999999999997764 36555443
No 70
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.70 E-value=1.9e-16 Score=161.31 Aligned_cols=167 Identities=17% Similarity=0.095 Sum_probs=122.4
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCC
Q 015609 183 YPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTP 262 (403)
Q Consensus 183 ~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~ 262 (403)
+.++| .|++....+|+. +++++|++. .+.++||++|+.+++.+++++||+|++++..+++... .+.
T Consensus 42 ~~Y~r--~gnPt~~~lE~~----lA~l~g~~~-----~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~--~~~- 107 (377)
T TIGR01324 42 LTYGR--RGTLTHFALQDA----MCELEGGAG-----CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRY--FCD- 107 (377)
T ss_pred CcccC--CCCccHHHHHHH----HHHHhCCCc-----EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHH--HHH-
Confidence 33445 378888888864 889999876 4678899999999999999999999998877654321 000
Q ss_pred ccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccc
Q 015609 263 GGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHIS 340 (403)
Q Consensus 263 ~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~ 340 (403)
..+...+ +++..++.+ +.+++++++.+ ++|+|+++..+ .+...|+++|+++|+++|+++++|++|+.
T Consensus 108 --~~~~~~g--i~v~~~d~~------~~e~l~~~i~~-~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~ 176 (377)
T TIGR01324 108 --IVLKRMG--VDITYYDPL------IGEDIATLIQP-NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAA 176 (377)
T ss_pred --HHHHhcC--cEEEEECCC------CHHHHHHhcCC-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc
Confidence 0011122 334443321 23788888864 68999887544 45688999999999999999999999999
Q ss_pred cccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 341 GLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 341 Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
|... .|++ .+|++++|+||+|+|+. ||+++.+++
T Consensus 177 g~~~-----~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~ 214 (377)
T TIGR01324 177 GLLF-----KPLEHGVDISIQAGTKYLVGHSDIMIGTVVANAR 214 (377)
T ss_pred cccc-----CccccCceEEEecCceeccCCCCceEEEEEeCHH
Confidence 8653 3555 49999999999999875 588877653
No 71
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.70 E-value=2e-16 Score=161.34 Aligned_cols=159 Identities=20% Similarity=0.211 Sum_probs=120.7
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
+++...++|+ ++++++|.+. .+.++||++|+.+++.+++++||+|++....|++... .+...
T Consensus 51 ~np~~~~lE~----~lA~l~g~~~-----~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~---------~~~~~ 112 (385)
T PRK08574 51 ENPTLRPLEE----ALAKLEGGVD-----ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLR---------LLKSL 112 (385)
T ss_pred CCccHHHHHH----HHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHH---------HHHHh
Confidence 5677777876 4999999876 3678899999999999999999999999888766431 11111
Q ss_pred -ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEecccccccccccc
Q 015609 271 -SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKE 347 (403)
Q Consensus 271 -g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~ 347 (403)
..+.++..+ .+|++++++++++.++|+|+++..++ +.+.|+++|.++|+++|+++++|++|+.|+..
T Consensus 113 ~~~g~~v~~~-------~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~--- 182 (385)
T PRK08574 113 EKFGVKVVLA-------YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY--- 182 (385)
T ss_pred hccCcEEEEE-------CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC---
Confidence 112233322 24689999998765789998875544 56889999999999999999999999888542
Q ss_pred ccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 348 LASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 348 ~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.++. ++|++++|+||+|.||. ||+++++++
T Consensus 183 --~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~ 216 (385)
T PRK08574 183 --RPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSG 216 (385)
T ss_pred --ChhhhCCcEEEeeCceeecCCCCceeEEEEECcH
Confidence 2343 48999999999999874 786777554
No 72
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.70 E-value=4.3e-16 Score=157.65 Aligned_cols=160 Identities=21% Similarity=0.243 Sum_probs=122.0
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
+++...++|+ ++++++|.+. .+.++||++|+.+++.+++++||+|++....|++..... . ......
T Consensus 38 ~~p~~~~le~----~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~--~---~~~~~~ 103 (369)
T cd00614 38 GNPTVDALEK----KLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLF--E---RLLPKL 103 (369)
T ss_pred CChhHHHHHH----HHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHH--H---HHHhhc
Confidence 5677788876 4899999876 477889999999999999999999999988776643100 0 001112
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccc
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL 348 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~ 348 (403)
| +++..++. -|++++++++++ ++++|+++..+ .+.+.|+++|.++|+++|+++++|++|+.|..
T Consensus 104 g--~~~~~v~~------~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~----- 169 (369)
T cd00614 104 G--IEVTFVDP------DDPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL----- 169 (369)
T ss_pred C--eEEEEeCC------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc-----
Confidence 2 34455443 268999999865 68998887544 46788999999999999999999999988753
Q ss_pred cCCCC-cccEEEEcCcCCCcCCc---eEEEEEeC
Q 015609 349 ASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRR 378 (403)
Q Consensus 349 ~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~ 378 (403)
..+++ .+|++++|++|+|.|+. ||++++++
T Consensus 170 ~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~ 203 (369)
T cd00614 170 QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSG 203 (369)
T ss_pred CChhhhCCcEEEeccceeccCCCCceEEEEEeCc
Confidence 24455 48999999999998754 89999876
No 73
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.70 E-value=4e-16 Score=159.42 Aligned_cols=168 Identities=18% Similarity=0.192 Sum_probs=125.5
Q ss_pred CCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccC
Q 015609 182 GYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHT 261 (403)
Q Consensus 182 G~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~ 261 (403)
++.++|| +++..+++|+ ++++++|+++ .+.++||++|+.+++.+++++||+|++....|++.+....
T Consensus 50 ~~~y~r~--~~p~~~~le~----~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~-- 116 (391)
T TIGR01328 50 GYIYSRL--GNPTVSNLEG----RIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLE-- 116 (391)
T ss_pred CCceeCC--CCchHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHH--
Confidence 4545555 6677788876 4999999987 4778899999999999999999999999887766532100
Q ss_pred CccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEecccc
Q 015609 262 PGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 262 ~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
..+... ++++..++++ |++++++++.+ ++++|+++..+ .|.+.|+++|.++|+++|+++++|++|+
T Consensus 117 ---~~~~~~--G~~~~~vd~~------d~e~l~~~i~~-~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a 184 (391)
T TIGR01328 117 ---HALTKF--GIQVDFINMA------IPEEVKAHIKD-NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFA 184 (391)
T ss_pred ---HHHhcC--CeEEEEECCC------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCc
Confidence 011112 2445554432 78999998864 68898876544 4678899999999999999999999998
Q ss_pred ccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 340 SGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 340 ~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.+... .++. ++|++++|++|+++|+. ||+++.+++
T Consensus 185 ~~~~~-----~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~ 223 (391)
T TIGR01328 185 TPMLT-----NPVALGVDVVVHSATKYIGGHGDVVAGLICGKAE 223 (391)
T ss_pred hhccC-----CchhcCCCEEEccccccccCCCCceEEEEEcCHH
Confidence 77542 3444 59999999999998764 688877654
No 74
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.69 E-value=4.1e-16 Score=160.03 Aligned_cols=168 Identities=21% Similarity=0.224 Sum_probs=126.4
Q ss_pred CCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccC
Q 015609 182 GYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHT 261 (403)
Q Consensus 182 G~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~ 261 (403)
++.++|| +++..+++|+ ++++++|.+. .+.+.||+.|+.+++.+++++||+|++....|++.+... .
T Consensus 61 ~~~Y~r~--~~p~~~~le~----~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~--~ 127 (403)
T PRK07810 61 RFVYSRY--GNPTVSMFEE----RLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVC--N 127 (403)
T ss_pred CcceeCC--CCchHHHHHH----HHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHH--H
Confidence 3445554 6677777876 4899999886 478899999999999999999999999887776643210 0
Q ss_pred CccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEecccc
Q 015609 262 PGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 262 ~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
..+...| .++..++. .|++++++++++ ++++|+++.++ ++.+.|+++|+++|+++|++|++|++|+
T Consensus 128 ---~~~~~~G--~~v~~vd~------~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a 195 (403)
T PRK07810 128 ---EILPRWG--VETVFVDG------EDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFA 195 (403)
T ss_pred ---HHHHHcC--cEEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCC
Confidence 1112223 44555442 489999999875 68998886544 4678899999999999999999999998
Q ss_pred ccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 340 SGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 340 ~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.+... .++. ++|++++|++|++.|+. ||+|+++++
T Consensus 196 ~~~~~-----~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~ 234 (403)
T PRK07810 196 TPLLQ-----RGLPLGADVVVYSGTKHIDGQGRVLGGAILGDRE 234 (403)
T ss_pred ccccC-----ChhhcCCcEEEccCCceecCCcCceeEEEEeChH
Confidence 87542 3344 49999999999998754 788888765
No 75
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.69 E-value=2.9e-16 Score=156.01 Aligned_cols=208 Identities=19% Similarity=0.153 Sum_probs=153.2
Q ss_pred cccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015609 152 KGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 152 ~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
+...+..+++|+......+...+ . --..||.++|. +++..+.+|+ |++.|-|.-.+ +.+.||+.|+.
T Consensus 25 ra~PIyqtTsy~F~d~~haa~lF-~-l~~~G~iYsRi--~NPT~~vlE~----RiAaLEGG~aa-----~a~aSG~AA~~ 91 (426)
T COG2873 25 RAVPIYQTTSYVFDDTDHAAALF-G-LKEPGNIYTRI--MNPTTDVLEE----RIAALEGGVAA-----LAVASGQAAIT 91 (426)
T ss_pred eecceeeeeeeecCCHHHHHHHh-C-CCcCCceeeec--cCchHHHHHH----HHHHhhcchhh-----hhhccchHHHH
Confidence 45778888999876666654422 1 12347877776 6888898886 69999987653 66789999999
Q ss_pred HHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC
Q 015609 232 AVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS 311 (403)
Q Consensus 232 aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~ 311 (403)
.++..++++||+|+....-|||... .+. ..+...++++.+++ ..|++.+++++.+ ++|+|+++.-.
T Consensus 92 ~ai~~la~aGD~iVss~~LYGGT~~--lf~-----~tl~~~Gi~v~fvd------~~d~~~~~~aI~~-nTkavf~Etig 157 (426)
T COG2873 92 YAILNLAGAGDNIVSSSKLYGGTYN--LFS-----HTLKRLGIEVRFVD------PDDPENFEAAIDE-NTKAVFAETIG 157 (426)
T ss_pred HHHHHhccCCCeeEeeccccCchHH--HHH-----HHHHhcCcEEEEeC------CCCHHHHHHHhCc-ccceEEEEecc
Confidence 9999999999999999999999642 111 11122335566544 2579999999986 68999988666
Q ss_pred CC--ccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCc-ccEEEEcCcCCCcCCc---eEEEEEeCCCCCc-c
Q 015609 312 YP--REWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDY-CDIVTSTTHKSLRGPR---GGIIFFRRGKKPR-K 384 (403)
Q Consensus 312 ~g--~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~-aDivt~StHKtL~GP~---GG~I~~~~~~~~~-~ 384 (403)
+| .+.|+++|++|||++|++|+||.+-+ .+.+-.|+++ +|+|+.|+.||++|.- ||+|+-.....+. .
T Consensus 158 NP~~~v~Die~ia~iAh~~gvpliVDNT~a-----tpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~ 232 (426)
T COG2873 158 NPGLDVLDIEAIAEIAHRHGVPLIVDNTFA-----TPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTAN 232 (426)
T ss_pred CCCccccCHHHHHHHHHHcCCcEEEecCCC-----cceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccC
Confidence 65 57899999999999999999999833 3455678885 9999999999998864 5777654432222 3
Q ss_pred cCCCccc
Q 015609 385 QGIPLNH 391 (403)
Q Consensus 385 ~~~p~~q 391 (403)
-.||...
T Consensus 233 ~rfP~~~ 239 (426)
T COG2873 233 GRFPEFT 239 (426)
T ss_pred CCCcccC
Confidence 3555543
No 76
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.69 E-value=4.8e-16 Score=173.57 Aligned_cols=164 Identities=21% Similarity=0.201 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEeCChH---HHHHHHHhhhccC-CC----eEEecCCCCCccccccccCCccchh
Q 015609 196 DQIENLCFERALKAFDLDSDNWGVNVQPYSCT---SANFAVYTGLLLP-GD----RIMGLDSPSGGHLSHGYHTPGGKKV 267 (403)
Q Consensus 196 ~~lE~~arerla~lfg~~~~~~~v~V~~~SGT---~An~aal~all~p-GD----~VL~~~~ehgghlsh~~~~~~~~~v 267 (403)
+.++ .+|+.++++||++. +.+++++|. .|++.++.+++++ || +|+++..+|+.+.. +.
T Consensus 568 ~~~~-~~r~~la~i~g~~~----v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a---------~a 633 (993)
T PLN02414 568 EMFE-DLGDLLCEITGFDS----FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPA---------SA 633 (993)
T ss_pred HHHH-HHHHHHHHHhCCCe----EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHH---------HH
Confidence 3444 57999999999965 555555543 5999999999876 88 89999999876542 23
Q ss_pred hhcccceEEeeeecCCCCCCCCHHHHHHHhccC--CCcEEEEe-CCCCC-ccccHHHHHHHHHHcCCEEEEecccccccc
Q 015609 268 SAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY--RPKILICG-GSSYP-REWDYGRFRQIADKCGAVLMCDMAHISGLI 343 (403)
Q Consensus 268 ~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~--~pklViv~-~s~~g-~~~Di~~I~~Iake~Ga~LivDaAh~~Gli 343 (403)
...| ++++.++++ ++|.+|+++|++++.++ ++++|++. .++++ .+.|+++|+++||++|+++++|+||..|++
T Consensus 634 ~~~G--~~vv~v~~d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~ 710 (993)
T PLN02414 634 AMCG--MKIVVVGTD-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQV 710 (993)
T ss_pred HHCC--CEEEEeccC-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhcc
Confidence 3334 566666666 47899999999999853 45677665 45554 567899999999999999999999998874
Q ss_pred ccccccCCCC-cccEEEEcCcCCCcCCce------EEEEEeCC
Q 015609 344 AAKELASPFD-YCDIVTSTTHKSLRGPRG------GIIFFRRG 379 (403)
Q Consensus 344 a~g~~~~p~~-~aDivt~StHKtL~GP~G------G~I~~~~~ 379 (403)
. ...|.+ ++|+++++.||+|+||.| |++.+++.
T Consensus 711 ~---l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~ 750 (993)
T PLN02414 711 G---LTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH 750 (993)
T ss_pred C---cCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchh
Confidence 3 123333 499999999999987773 88877764
No 77
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=4.5e-16 Score=159.42 Aligned_cols=160 Identities=18% Similarity=0.124 Sum_probs=117.2
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
|++....+|+ +++++.+.+. .+.+.||++|+.+++.+++++||+|++.+..|++..... . ..+...
T Consensus 59 ~npt~~~Le~----~iA~le~~~~-----~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~--~---~~l~~~ 124 (394)
T PRK09028 59 GTPTHFAFQA----AIVELEGGAG-----TALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLC--D---KILKGF 124 (394)
T ss_pred CCchHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH--H---Hhhhhc
Confidence 4555566664 5888888765 367889999999999999999999999988776543110 0 011112
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEeccccccccccccc
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL 348 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~ 348 (403)
| +++..++. .|.+.+++++.+ ++|+|+++..++ +...|+++|+++||++|+++++|++|+.+..
T Consensus 125 G--i~v~~v~~------~~~e~l~~~l~~-~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~----- 190 (394)
T PRK09028 125 G--IETTYYDP------MIGEGIRELIRP-NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN----- 190 (394)
T ss_pred c--eEEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-----
Confidence 2 33333332 256788888864 689999886655 4578999999999999999999999988742
Q ss_pred cCCCCc-ccEEEEcCcCCCcCCc---eEEEEEeC
Q 015609 349 ASPFDY-CDIVTSTTHKSLRGPR---GGIIFFRR 378 (403)
Q Consensus 349 ~~p~~~-aDivt~StHKtL~GP~---GG~I~~~~ 378 (403)
..|+++ ||+++.|+||||.||. ||+++.++
T Consensus 191 ~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~ 224 (394)
T PRK09028 191 SRPFEMGVDISIQAATKYIVGHSDVMLGTATANE 224 (394)
T ss_pred CCccccCceEEEEeCCeEecCCCCEEEEEEECCH
Confidence 356664 9999999999999985 57665443
No 78
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.69 E-value=1.4e-15 Score=160.76 Aligned_cols=177 Identities=19% Similarity=0.149 Sum_probs=124.7
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCC------------CCCcceEEeCChHHHHHHHHhhh----cc---------------
Q 015609 191 GNQYIDQIENLCFERALKAFDLDS------------DNWGVNVQPYSCTSANFAVYTGL----LL--------------- 239 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~------------~~~~v~V~~~SGT~An~aal~al----l~--------------- 239 (403)
..+...++|+.+.++++++++..+ ..| .++.++||.||..++.+. +.
T Consensus 123 ~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~--G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~ 200 (522)
T TIGR03799 123 TSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSL--GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFA 200 (522)
T ss_pred cCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCC--eEEcCchHHHHHHHHHHHHHHhccccccccccccccchh
Confidence 355677899999999999985321 122 355678999999887553 11
Q ss_pred -------CCCeEEecCCCCCccccccccCCccchhhhcccc-eEEeeeecCCCCCCCCHHHHHHHhcc---CCCcEE-EE
Q 015609 240 -------PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-FESFPYKVNPQTGYIDYEKLEEKAMD---YRPKIL-IC 307 (403)
Q Consensus 240 -------pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-~~vv~~~vd~~~g~ID~d~Le~~i~~---~~pklV-iv 307 (403)
++..|+++..+|.+.. +.+...|.+ .+++.+++|. ++.+|+++|++++++ .+.+++ |+
T Consensus 201 ~~~~~~~~~~~v~~S~~~H~S~~---------kaa~~lglg~~~v~~vp~d~-~g~~d~~~L~~~i~~~~~~g~~~~~vv 270 (522)
T TIGR03799 201 ALKHYGYDGLAILVSERGHYSLG---------KAADVLGIGRDNLIAIKTDA-NNRIDVDALRDKCAELAEQNIKPLAIV 270 (522)
T ss_pred hhhhccCCceEEEECCCchHHHH---------HHHHHcCCCcccEEEEEeCC-CCcCCHHHHHHHHHHHHHCCCCcEEEE
Confidence 1346777776653321 344455543 2456667774 689999999999863 233333 22
Q ss_pred ---eCCCCCccccHHHHHHHHHHcCCEEEEecccccccccccccc---CCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 308 ---GGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELA---SPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 308 ---~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~---~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+.+.+|.+.|+++|+++|+++|++||||+||+.+.+....+. ..++.+|.+++++||||++|.| |++++++.
T Consensus 271 ataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~ 349 (522)
T TIGR03799 271 GVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDP 349 (522)
T ss_pred EEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCH
Confidence 244678999999999999999999999999988765433221 1223599999999999999998 99988875
No 79
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.68 E-value=5.3e-16 Score=157.80 Aligned_cols=192 Identities=20% Similarity=0.249 Sum_probs=132.6
Q ss_pred eeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHh
Q 015609 156 LIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYT 235 (403)
Q Consensus 156 LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~ 235 (403)
+..+.+|..+...++..... .+. .++.++|| +++...++|+ ++++++|++. .+.+.||++|+.+++.
T Consensus 21 i~~~~~~~~~~~~~~~~~~~-~~~-~~~~y~r~--~~p~~~~le~----~la~l~g~~~-----~~~~~sG~~Ai~~al~ 87 (380)
T TIGR01325 21 LFLTSSFVYDSAAHAADRFA-GEI-PGFVYSRY--ANPTVAAFEE----RIAALEGAER-----AVATATGMSAIQAALM 87 (380)
T ss_pred eeCCcceecCCHHHHHHhhc-ccc-CCcceecC--CCchHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHH
Confidence 44555665444444433221 111 23445555 4566666765 5899999975 3678899999999999
Q ss_pred hhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CC
Q 015609 236 GLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YP 313 (403)
Q Consensus 236 all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g 313 (403)
+++++||+|++....|++...... ..+...| +++..++. .|++++++++++ ++|+|++..++ ++
T Consensus 88 al~~~Gd~Vl~~~~~~~~t~~~~~-----~~~~~~g--~~v~~v~~------~d~~~l~~~i~~-~tklV~le~p~np~g 153 (380)
T TIGR01325 88 TLLQAGDHVVASRSLFGSTVGFIS-----EILPRFG--IEVSFVDP------TDLNAWEAAVKP-NTKLVFVETPSNPLG 153 (380)
T ss_pred HHhCCCCEEEEecCCcchHHHHHH-----HHHHHhC--CEEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCC
Confidence 999999999998877765432100 0112223 34444432 278999988864 68998887554 46
Q ss_pred ccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 314 REWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 314 ~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
...|+++|.++|+++|++|++|++|+.+.. ..|++ .+|++++|++|+++|+. ||+++.+++
T Consensus 154 ~~~dl~~I~~la~~~gi~livD~a~~~~~~-----~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~ 218 (380)
T TIGR01325 154 ELVDIAALAELAHAIGALLVVDNVFATPVL-----QQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEE 218 (380)
T ss_pred eeeCHHHHHHHHHHcCCEEEEECCCccccc-----CCchhhCCCEEEeeccceecCCCCeEEEEEEeCHH
Confidence 788999999999999999999999876542 23454 48999999999998863 688887764
No 80
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.68 E-value=5.7e-16 Score=158.20 Aligned_cols=192 Identities=23% Similarity=0.290 Sum_probs=131.9
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015609 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
-.+..+.+|..+..-+. ...... ..++.++|+ |++..+.+|+ +++++.|++. .+.+.||+.|+.++
T Consensus 21 ~pi~~sstf~~~~~~~~--~~~~~~-~~~~~Y~R~--gnPt~~~le~----~la~Le~g~~-----a~~~~SGmaAi~~~ 86 (386)
T PF01053_consen 21 PPIYQSSTFVFDSAEEL--DAFAGE-EKGYIYSRY--GNPTVRALEQ----RLAALEGGED-----ALLFSSGMAAISAA 86 (386)
T ss_dssp --B---SBBBBSSHHHH--HHHTTS-SSSCSBTTT--C-HHHHHHHH----HHHHHHT-SE-----EEEESSHHHHHHHH
T ss_pred CCccccccCcccchHHH--HhhcCC-CCCcceecc--ccccHHHHHH----HHHHhhcccc-----eeeccchHHHHHHH
Confidence 34555667765544443 222222 335666666 7899998887 4899999976 46788999999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCC
Q 015609 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYP 313 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g 313 (403)
+.+++++||+|++....|++.... + +. .+...++++..++. -|+++|++++++ ++++|+++...++
T Consensus 87 l~~ll~~Gd~iv~~~~~Y~~t~~~--~----~~-~l~~~gv~v~~~d~------~d~~~l~~~l~~-~t~~v~~EspsNP 152 (386)
T PF01053_consen 87 LLALLKPGDHIVASDDLYGGTYRL--L----EE-LLPRFGVEVTFVDP------TDLEALEAALRP-NTKLVFLESPSNP 152 (386)
T ss_dssp HHHHS-TTBEEEEESSSSHHHHHH--H----HH-CHHHTTSEEEEEST------TSHHHHHHHHCT-TEEEEEEESSBTT
T ss_pred HHhhcccCCceEecCCccCcchhh--h----hh-hhcccCcEEEEeCc------hhHHHHHhhccc-cceEEEEEcCCCc
Confidence 999999999999999888775321 1 00 01122345555432 589999999986 7899999877665
Q ss_pred --ccccHHHHHHHHHHcC-CEEEEeccccccccccccccCCCCc-ccEEEEcCcCCCcCCc---eEEEEEeC
Q 015609 314 --REWDYGRFRQIADKCG-AVLMCDMAHISGLIAAKELASPFDY-CDIVTSTTHKSLRGPR---GGIIFFRR 378 (403)
Q Consensus 314 --~~~Di~~I~~Iake~G-a~LivDaAh~~Glia~g~~~~p~~~-aDivt~StHKtL~GP~---GG~I~~~~ 378 (403)
.+.|+++|+++||++| ++++||.+-+.+ ...+|+.+ ||+++.|+.|++.|.. ||++++++
T Consensus 153 ~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp-----~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~ 219 (386)
T PF01053_consen 153 TLEVPDLEAIAKLAKEHGDILVVVDNTFATP-----YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNG 219 (386)
T ss_dssp TTB---HHHHHHHHHHTTT-EEEEECTTTHT-----TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESS
T ss_pred ccccccHHHHHHHHHHhCCceEEeeccccce-----eeeccCcCCceEEEeeccccccCCcceeeEEEEECc
Confidence 5789999999999999 999999985554 34567775 9999999999999887 79999876
No 81
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.68 E-value=5.8e-16 Score=161.23 Aligned_cols=204 Identities=18% Similarity=0.175 Sum_probs=149.5
Q ss_pred hhcccceeccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccch-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC
Q 015609 150 QFKGIELIASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTGN-QYIDQIENLCFERALKAFDLDSDNWGVNVQPY 224 (403)
Q Consensus 150 q~~~l~LiaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G~-~~~~~lE~~arerla~lfg~~~~~~~v~V~~~ 224 (403)
..+.+..++|++|+ +|+++++....+ .+|+.|..|+|...|+ ....++|+ ++++++|.+. .+.++
T Consensus 100 ~~r~~l~FsSndYLGL~~~p~v~~a~~~ai-~~yG~g~~gSrl~~G~~~~h~~LE~----~LA~f~g~e~-----all~s 169 (476)
T PLN02955 100 RFKKLLLFSGNDYLGLSSHPTISNAAANAA-KEYGMGPKGSALICGYTTYHRLLES----SLADLKKKED-----CLVCP 169 (476)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHH-HHcCCCCCCcCccccChHHHHHHHH----HHHHHHCCCc-----EEEEC
Confidence 44567779999998 899999988765 6788888899988887 44466776 5999999987 47889
Q ss_pred ChHHHHHHHHhhhc--------------cCCCeEEecCCCCCccccccccCCccchhhhccc--ceEEeeeecCCCCCCC
Q 015609 225 SCTSANFAVYTGLL--------------LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI--FFESFPYKVNPQTGYI 288 (403)
Q Consensus 225 SGT~An~aal~all--------------~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~--~~~vv~~~vd~~~g~I 288 (403)
||+.||.+++.++. .++|.|+.....|.+ +. ..+.+... ..+++.|+ +.
T Consensus 170 SGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaS------I~---dG~~ls~~~~~a~~~~f~------HN 234 (476)
T PLN02955 170 TGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHAS------II---DGVRLAERQGNVEVFVYR------HC 234 (476)
T ss_pred ChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHH------HH---HHHHhccccCCceEEEeC------CC
Confidence 99999999998872 456677777765433 22 11222211 23455555 46
Q ss_pred CHHHHHHHhccCC--CcEEEEeC--CCCCccccHHHHHHHHHHcCCEEEEecccccccccc---cccc-CCC-CcccEEE
Q 015609 289 DYEKLEEKAMDYR--PKILICGG--SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA---KELA-SPF-DYCDIVT 359 (403)
Q Consensus 289 D~d~Le~~i~~~~--pklViv~~--s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~---g~~~-~p~-~~aDivt 359 (403)
|+++|+++++..+ .++|+++. +..|.+.|+++|.++|+++|++|++|.||+.|.+.. |... ..+ +..|+++
T Consensus 235 D~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~ 314 (476)
T PLN02955 235 DMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCV 314 (476)
T ss_pred CHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEE
Confidence 8999999987543 34566553 345678899999999999999999999999998764 2111 111 2489999
Q ss_pred EcCcCCCcCCceEEEEEeCC
Q 015609 360 STTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 360 ~StHKtL~GP~GG~I~~~~~ 379 (403)
+|+.|.| |-.||+|++++.
T Consensus 315 ~TLsKA~-G~~GGfi~gs~~ 333 (476)
T PLN02955 315 GTLSKAA-GCHGGFIACSKK 333 (476)
T ss_pred EeCccch-hccCceeecHHH
Confidence 9999987 678999999874
No 82
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.68 E-value=1.7e-15 Score=151.71 Aligned_cols=197 Identities=20% Similarity=0.140 Sum_probs=128.9
Q ss_pred CccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-
Q 015609 160 ENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL- 238 (403)
Q Consensus 160 en~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all- 238 (403)
.....+.+++++..++... .|+++ .+.+. ..+++.+++.+++++|++++. .+++.+|++++..++.++.
T Consensus 29 ~~~~~~~~~~a~~~~~~~~--~~~~~--~~~~~---~~~~~~~~~~la~~~g~~~~~---~~~~~g~~~~~~~~~~~~~~ 98 (373)
T TIGR03812 29 CTNPHPIAVKAYDMFIETN--LGDPG--LFPGT---KKIEEEVVGSLGNLLHLPDAY---GYIVSGGTEANIQAVRAAKN 98 (373)
T ss_pred eCCchHHHHHHHHHHhhcC--CCCcc--cCccH---HHHHHHHHHHHHHHhCCCCCC---eEEeccHHHHHHHHHHHHHH
Confidence 3345666788877654332 34443 23343 244556788999999998642 3556788999888776653
Q ss_pred -----cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC-CCC
Q 015609 239 -----LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG-SSY 312 (403)
Q Consensus 239 -----~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~-s~~ 312 (403)
++||+|+++...|.+.. +.+...| ++++.+++++ ++.+|++++++++.+...+++++.+ +.+
T Consensus 99 ~~~~~~~g~~vl~~~~~h~~~~---------~~~~~~G--~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~vv~~~~~~~t 166 (373)
T TIGR03812 99 LAREEKRTPNIIVPESAHFSFE---------KAAEMLG--LELRYAPLDE-DYTVDVKDVEDLIDDNTIGIVGIAGTTEL 166 (373)
T ss_pred HHhccCCCcEEEECCcchHHHH---------HHHHHcC--CeEEEEeeCC-CCCcCHHHHHHHHhhCcEEEEEECCCCCC
Confidence 47799999886543211 2233444 3455556653 6789999999998753224554443 346
Q ss_pred CccccHHHHHHHHHHcCCEEEEeccccccccccc---cccCCCC----cccEEEEcCcCCCcCCc-eEEEEEeC
Q 015609 313 PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAK---ELASPFD----YCDIVTSTTHKSLRGPR-GGIIFFRR 378 (403)
Q Consensus 313 g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g---~~~~p~~----~aDivt~StHKtL~GP~-GG~I~~~~ 378 (403)
|...|+++|.++|+++|+++++|+||+.+.++.. ....+++ .+|++++++||++.+|. +|++++.+
T Consensus 167 G~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~ 240 (373)
T TIGR03812 167 GQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRS 240 (373)
T ss_pred CccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeC
Confidence 7889999999999999999999999987654311 1111222 58999999999866553 34444433
No 83
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.68 E-value=6e-16 Score=158.49 Aligned_cols=168 Identities=20% Similarity=0.247 Sum_probs=124.5
Q ss_pred CCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccC
Q 015609 182 GYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHT 261 (403)
Q Consensus 182 G~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~ 261 (403)
++.++|| +++...++|+ ++++++|++++ +.+.||+.|+.+++.+++++||+|++....++++....
T Consensus 56 ~~~y~r~--~~p~~~~Le~----~lA~l~G~~~~-----~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~--- 121 (398)
T PRK07504 56 GFIYSRY--SNPTVDMFEK----RMCALEGAEDA-----RATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVV--- 121 (398)
T ss_pred CceeecC--CCchHHHHHH----HHHHHhCCCee-----eEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHH---
Confidence 3444554 5566677775 58999999873 45779999999988889999999999988777653210
Q ss_pred CccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEecccc
Q 015609 262 PGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 262 ~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
... ....++++..++ .+|++++++++.+ ++|+|+++.+++ |.+.|+++|.++|+++|+++++|++|+
T Consensus 122 ---~~~-~~~~G~~v~~vd------~~d~e~l~~ai~~-~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a 190 (398)
T PRK07504 122 ---ETL-LPRYGIESTLVD------GLDLDNWEKAVRP-NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFA 190 (398)
T ss_pred ---HHH-HhhcCeEEEEEC------CCCHHHHHHhcCc-CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCcc
Confidence 000 011223444432 3799999999864 689998876554 678999999999999999999999998
Q ss_pred ccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 340 SGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 340 ~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.|... .+++ ++|++++|+||++.|+. ||+++++++
T Consensus 191 ~~~~~-----~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~ 229 (398)
T PRK07504 191 TPLFQ-----KPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKA 229 (398)
T ss_pred ccccC-----CchhhCCCEEEeeccccccCCccceEEEEEeCcH
Confidence 87542 3444 48999999999998753 688887764
No 84
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.68 E-value=7.9e-16 Score=156.84 Aligned_cols=165 Identities=18% Similarity=0.232 Sum_probs=123.0
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCC
Q 015609 183 YPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTP 262 (403)
Q Consensus 183 ~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~ 262 (403)
+.++|| +++...+||+ ++++++|.+. .+.+.||+.|+.+++.+++++||+|++....|++...-
T Consensus 53 ~~y~r~--~~pt~~~Le~----~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~----- 116 (386)
T PRK06767 53 YIYSRL--GNPTVKLFEE----RMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGF----- 116 (386)
T ss_pred ccccCC--CCcchHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHH-----
Confidence 344455 5666777776 4899999875 47788999999999999999999999998877655321
Q ss_pred ccchhhhcc--cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccc
Q 015609 263 GGKKVSAAS--IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAH 338 (403)
Q Consensus 263 ~~~~v~~~g--~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh 338 (403)
+.... ..+++..+ ...|++++++++.+ ++|+|+++.++ .|.+.|+++|.++|+++|+++++|+||
T Consensus 117 ----~~~~~~~~gi~~~~~------~~~d~~~l~~~i~~-~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~ 185 (386)
T PRK06767 117 ----LEVLEEKFMITHSFC------DMETEADIENKIRP-NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTF 185 (386)
T ss_pred ----HHHHHhhcCeEEEEe------CCCCHHHHHHhhCc-CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCC
Confidence 11111 11222222 12588999998864 68999887554 457889999999999999999999999
Q ss_pred cccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 339 ISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 339 ~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
+.+... .|+. ++|++++|++|++.|+. ||+++++++
T Consensus 186 a~~~~~-----~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~ 225 (386)
T PRK06767 186 CSPYLQ-----RPLELGCDAVVHSATKYIGGHGDVVAGVTICKTR 225 (386)
T ss_pred cccccC-----CchhcCCcEEEecCcceecCCCCceeEEEEeChH
Confidence 765432 3444 48999999999998875 799988775
No 85
>PRK05968 hypothetical protein; Provisional
Probab=99.68 E-value=8.4e-16 Score=156.95 Aligned_cols=193 Identities=16% Similarity=0.113 Sum_probs=133.6
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015609 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
..+..+.+|..+.+ +.+...+... ..++.++|+ +++...++|+ ++++++|+++ .+.++||+.|+.++
T Consensus 28 ~pi~~~~~~~~~~~-~~~~~~~~~~-~~~~~Y~r~--~~p~~~~le~----~lA~l~g~~~-----av~~~sG~~Ai~~a 94 (389)
T PRK05968 28 PPIFQTSLFTFDSY-DEMEDVYAGE-KVRPIYSRG--DNPTVRAFEE----MLAKLEGAED-----ARGFASGMAAISST 94 (389)
T ss_pred CCccCCcceecCCH-HHHHHhhcCC-CCCccccCC--CChhHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHH
Confidence 45666777776554 3333333221 112334444 4566777775 5899999986 36788999999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--
Q 015609 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS-- 311 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~-- 311 (403)
+.++++|||+|++....|++.+.-. ...+...| +++..++. .|++++++++. ++|+|++..+.
T Consensus 95 l~al~~~Gd~Vl~~~~~y~~t~~~~-----~~~~~~~G--~~v~~vd~------~d~~~l~~~i~--~tklV~ie~pt~~ 159 (389)
T PRK05968 95 VLSFVEPGDRIVAVRHVYPDAFRLF-----ETILKRMG--VEVDYVDG------RDEEAVAKALP--GAKLLYLESPTSW 159 (389)
T ss_pred HHHHhCCCCEEEEeCCCchHHHHHH-----HHHHHHcC--ceEEEeCC------CCHHHHHHhcc--cCCEEEEECCCCC
Confidence 9999999999999988876653210 01112223 34444432 38899998873 57998876543
Q ss_pred CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCC---ceEEEEEeCC
Q 015609 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGP---RGGIIFFRRG 379 (403)
Q Consensus 312 ~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP---~GG~I~~~~~ 379 (403)
.+...|+++|.++|+++|+++++|++|+.+... .|+. ++|++++|++|+|.|| .||+++.+++
T Consensus 160 ~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~-----~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~ 226 (389)
T PRK05968 160 VFELQDVAALAALAKRHGVVTMIDNSWASPVFQ-----RPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKE 226 (389)
T ss_pred CCcHHHHHHHHHHHHHcCCEEEEECCCcchhcc-----CchhcCCcEEEeeccccccCCCCeEEEEEEECHH
Confidence 345689999999999999999999999877532 2343 4899999999999986 4688776653
No 86
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.68 E-value=1.8e-15 Score=152.76 Aligned_cols=200 Identities=16% Similarity=0.129 Sum_probs=134.3
Q ss_pred ccceeccCccC----cHHHHHHHHHHhhhcC-------CCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceE
Q 015609 153 GIELIASENFV----CRAVMEALGSHLTNKY-------SEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNV 221 (403)
Q Consensus 153 ~l~LiaSen~~----~p~V~eA~~s~l~~~y-------~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V 221 (403)
.+..++|++|+ +|.+.+++...+.. | +.|..|+|...|.. +.+++ ++++++++||++. .+
T Consensus 5 ~~~~~~s~~YL~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~gs~~~~g~~--~~~~~-~e~~la~~~~~~~-----~l 75 (370)
T PRK05937 5 LSIDFVTNDFLGFSRSDTLVHEVEKRYRL-YCRQFPHAQLGYGGSRAILGPS--SLLDD-LEHKIAHFHGAPE-----AF 75 (370)
T ss_pred ceEEeECCCccCCCCCHHHHHHHHHHHHH-hccccCCCCCCCCCcCcccCCh--HHHHH-HHHHHHHHhCCCe-----EE
Confidence 35567899998 77777777666544 3 24455666555543 22333 4667999999975 37
Q ss_pred EeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC-
Q 015609 222 QPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY- 300 (403)
Q Consensus 222 ~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~- 300 (403)
+++||+.||..++..+.++||.|+....+|++.+. .+.... .. .+.| ..+|+++|+++++..
T Consensus 76 ~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~---------~~~~~~-~~-~~~~------~~~d~~~l~~~l~~~~ 138 (370)
T PRK05937 76 IVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVY---------SLSVIS-GW-HQSF------RHNDLDHLESLLESCR 138 (370)
T ss_pred EECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHH---------HHHHcC-Cc-eEEe------cCCCHHHHHHHHHhhh
Confidence 88999999988777766789999888888655432 122221 11 1223 257899999998742
Q ss_pred ----CCcEEEEeC--CCCCccccHHHHHHHHHHcCCEEEEeccccccccccccc----cCCCCcccEEEEcCcCCCcCCc
Q 015609 301 ----RPKILICGG--SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL----ASPFDYCDIVTSTTHKSLRGPR 370 (403)
Q Consensus 301 ----~pklViv~~--s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~----~~p~~~aDivt~StHKtL~GP~ 370 (403)
++++|++.. +..|.++|+++|.++|+++|++|++|+||+.|.++.... ...+...++++.|++|.+ ||.
T Consensus 139 ~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~ 217 (370)
T PRK05937 139 QRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSM 217 (370)
T ss_pred ccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcC
Confidence 234555543 235789999999999999999999999999997653221 011112346678889965 788
Q ss_pred eEEEEEeCC
Q 015609 371 GGIIFFRRG 379 (403)
Q Consensus 371 GG~I~~~~~ 379 (403)
|+.+++.++
T Consensus 218 G~~vl~~~~ 226 (370)
T PRK05937 218 GAALLSSSE 226 (370)
T ss_pred ceEEEcCHH
Confidence 876777543
No 87
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.67 E-value=1.4e-15 Score=158.34 Aligned_cols=231 Identities=19% Similarity=0.173 Sum_probs=158.2
Q ss_pred CCCCCCChHHHHHHHHHHHh---hhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHH
Q 015609 130 QSLPLADPEIFDIMEKEKQR---QFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERA 206 (403)
Q Consensus 130 ~~l~~~d~ei~~li~~e~~r---q~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerl 206 (403)
.+.+.+.+++..++.+.... +........+++.+++.+.+++...+.... +.++. .+...++|+.+...+
T Consensus 38 ~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl--~d~~~-----~p~a~~~E~~~v~~l 110 (460)
T COG0076 38 EPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSALNKNL--GDPDE-----SPAAAELEERVVNML 110 (460)
T ss_pred CchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHHHhhcC--CCccc-----ChhHHHHHHHHHHHH
Confidence 45667777777773332222 233345555677788888888887765432 33221 234568999999999
Q ss_pred HHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc-----C---CC------eEEecCCCCCccccccccCCccchhhhccc
Q 015609 207 LKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL-----P---GD------RIMGLDSPSGGHLSHGYHTPGGKKVSAASI 272 (403)
Q Consensus 207 a~lfg~~~~~~~v~V~~~SGT~An~aal~all~-----p---GD------~VL~~~~ehgghlsh~~~~~~~~~v~~~g~ 272 (403)
+++++++...+ .+++++||+||+.++.+.-. . +. +|+++.. +|++.. +.+.+.|.
T Consensus 111 ~~l~~~~~~~~--G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~---aH~s~~------Kaa~~lG~ 179 (460)
T COG0076 111 SDLLGAPEEAS--GTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSET---AHFSFE------KAARYLGL 179 (460)
T ss_pred HHHhCCCCCCc--eEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCc---chhHHH------HHHHHhCC
Confidence 99999965433 46677899999988765411 1 11 4777664 344321 55667776
Q ss_pred ceEEeeeecCCCCCCCCHHHHHHHhccCCCc--EE-EEeCCCCCccccHHHHHHHHHHcCCEEEEecccccccccccccc
Q 015609 273 FFESFPYKVNPQTGYIDYEKLEEKAMDYRPK--IL-ICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELA 349 (403)
Q Consensus 273 ~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pk--lV-iv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~ 349 (403)
..+.++.. +.+..+|+++|++++.+.... +| +++.+.+|.+-|+++|++||+++++++|||+|-+..+++.....
T Consensus 180 ~~~~v~~~--~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~ 257 (460)
T COG0076 180 GLRRVPTV--PTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPD 257 (460)
T ss_pred CceeEEec--cCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCcc
Confidence 65555543 325789999999999987655 54 34566788999999999999999999999998544444322222
Q ss_pred CC----CCcccEEEEcCcCCCcCCce-EEEEEeCCC
Q 015609 350 SP----FDYCDIVTSTTHKSLRGPRG-GIIFFRRGK 380 (403)
Q Consensus 350 ~p----~~~aDivt~StHKtL~GP~G-G~I~~~~~~ 380 (403)
.. ++.+|.++.++||++..|.| |+|++++++
T Consensus 258 ~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e 293 (460)
T COG0076 258 GRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEE 293 (460)
T ss_pred chhhcCCCCceEEEECcccccCCCCCceEEEEECHH
Confidence 22 23599999999999999987 999999874
No 88
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.67 E-value=1.1e-15 Score=155.75 Aligned_cols=167 Identities=19% Similarity=0.158 Sum_probs=123.2
Q ss_pred CCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccC
Q 015609 182 GYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHT 261 (403)
Q Consensus 182 G~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~ 261 (403)
++.++|+ +++....||+ ++++++|++. .+.++||+.|+.+++ ++++|||+|++.+..|++.+....
T Consensus 41 ~~~y~r~--~~p~~~~Le~----~la~l~g~~~-----al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~-- 106 (380)
T PRK06176 41 GYEYSRS--GNPTRFALEE----LIADLEGGVK-----GFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFD-- 106 (380)
T ss_pred CCcccCC--CChhHHHHHH----HHHHHhCCCC-----EEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHH--
Confidence 3445554 6777888876 4899999887 377899999998766 578999999999887766542110
Q ss_pred CccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEecccc
Q 015609 262 PGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 262 ~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
..+.. .++++..++ ..|++++++++++ ++++|++..++ ++...|+++|.++|+++|+++++|++++
T Consensus 107 ---~~~~~--~gi~v~~vd------~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a 174 (380)
T PRK06176 107 ---KVLVK--NGLSCTIID------TSDLSQIKKAIKP-NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFA 174 (380)
T ss_pred ---HHHHh--cCeEEEEcC------CCCHHHHHHhcCc-CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCcc
Confidence 01111 223444433 2489999998875 68998886554 3578899999999999999999999988
Q ss_pred ccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 340 SGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 340 ~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.+.. ..|++ ++|++++|+||+|.||. ||++++++.
T Consensus 175 ~~~~-----~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~ 213 (380)
T PRK06176 175 TPYY-----QNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNE 213 (380)
T ss_pred cccc-----CCccccCCCEEEecCceeccCCccceeeEEEecHH
Confidence 7543 23444 49999999999998875 788888654
No 89
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.67 E-value=1.2e-15 Score=155.80 Aligned_cols=160 Identities=19% Similarity=0.209 Sum_probs=120.6
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
+++...++|+ ++++++|.+. .+.++||++|+.+++.+++++||+|++....|++..... ....
T Consensus 59 ~~p~~~~Le~----~lA~~~g~~~-----~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~--------~~~~ 121 (388)
T PRK07811 59 GNPTRTALEE----QLAALEGGAY-----GRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLI--------DKVF 121 (388)
T ss_pred CCccHHHHHH----HHHHHhCCCc-----eEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHH--------HHhC
Confidence 3455566665 5899999987 367789999999999999999999999988876643110 0111
Q ss_pred c-cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEecccccccccccc
Q 015609 271 S-IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKE 347 (403)
Q Consensus 271 g-~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~ 347 (403)
. .++++..++ ..|++++++++.+ ++|+|+++.+++ +...|+++|.++|+++|+++++|++++.+...
T Consensus 122 ~~~gi~~~~~d------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~--- 191 (388)
T PRK07811 122 TRWGVEYTPVD------LSDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQ--- 191 (388)
T ss_pred cCCCeEEEEeC------CCCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccC---
Confidence 1 123334332 2589999999875 689998875544 56889999999999999999999999877532
Q ss_pred ccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 348 LASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 348 ~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.|+. ++|++++|++|+|.||. ||+|+++++
T Consensus 192 --~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~ 225 (388)
T PRK07811 192 --QPLALGADVVVHSTTKYIGGHSDVVGGALVTNDE 225 (388)
T ss_pred --CchhhCCcEEEecCceeecCCCCcEEEEEEECCH
Confidence 3444 59999999999999884 788888764
No 90
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=1.5e-15 Score=157.08 Aligned_cols=158 Identities=22% Similarity=0.252 Sum_probs=119.4
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
+++....+|+ ++++++|.+. .+.++||++|+.+++.++++|||+|++....|++...- +. ..+...
T Consensus 61 ~~p~~~~le~----~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~--~~---~~~~~~ 126 (427)
T PRK05994 61 TNPTNAVLEE----RVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQ--FG---HAFKSF 126 (427)
T ss_pred CCccHHHHHH----HHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHH--HH---HHHHhc
Confidence 4455666765 5899999986 47788999999999999999999999999888765311 00 011222
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccc
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL 348 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~ 348 (403)
| ++++++++ .|++++++++.+ ++|+|++...+ .|.+.|+++|.++|+++|+++++|++|+.+..
T Consensus 127 G--~~v~~vd~------~d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~----- 192 (427)
T PRK05994 127 G--WQVRWADA------DDPASFERAITP-RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL----- 192 (427)
T ss_pred C--cEEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc-----
Confidence 2 44555442 378999999875 68988886543 46789999999999999999999999987753
Q ss_pred cCCCC-cccEEEEcCcCCCcCCc---eEEEEE
Q 015609 349 ASPFD-YCDIVTSTTHKSLRGPR---GGIIFF 376 (403)
Q Consensus 349 ~~p~~-~aDivt~StHKtL~GP~---GG~I~~ 376 (403)
..|++ .+|+++.|+||+++||. ||+++.
T Consensus 193 ~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 193 IRPIEHGADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred CCccccCCcEEEEcCccccCCCCCcEEEEEEe
Confidence 24555 49999999999998775 566664
No 91
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.67 E-value=1.2e-15 Score=156.56 Aligned_cols=166 Identities=19% Similarity=0.180 Sum_probs=121.7
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCC
Q 015609 183 YPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTP 262 (403)
Q Consensus 183 ~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~ 262 (403)
+.++|| +++..+++|+ ++++++|+++ .|.++||+.|+.+++.++++|||+|++....|++.+... .
T Consensus 57 ~~y~r~--~~p~~~~le~----~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~--~- 122 (403)
T PRK07503 57 HFYSRI--SNPTLALLEQ----RMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFL--H- 122 (403)
T ss_pred ceeeCC--CCchHHHHHH----HHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHH--H-
Confidence 334444 4566677765 5899999976 477889999999999999999999999887765543100 0
Q ss_pred ccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccc
Q 015609 263 GGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHIS 340 (403)
Q Consensus 263 ~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~ 340 (403)
..+.. .++++..+++ .|++++++++++ ++|+|++...+ +|...|+++|.++|+++|+++++|++|+.
T Consensus 123 --~~~~~--~G~~v~~vd~------~d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~ 191 (403)
T PRK07503 123 --HGLGE--FGVTVRHVDL------TDPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCT 191 (403)
T ss_pred --HHHhh--CCEEEEEeCC------CCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc
Confidence 01111 2344554443 378999998875 68998886444 46788999999999999999999999987
Q ss_pred cccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeC
Q 015609 341 GLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRR 378 (403)
Q Consensus 341 Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~ 378 (403)
+.. ..|+. ++|++++|++|+|+|+. ||+++.++
T Consensus 192 ~~~-----~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~ 228 (403)
T PRK07503 192 PYL-----QRPLELGADLVVHSATKYLGGHGDITAGLVVGGK 228 (403)
T ss_pred ccc-----CCchhhCCCEEEccccccccCCCceeEEEEEcCH
Confidence 643 23444 48999999999998764 78887544
No 92
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=1.5e-15 Score=157.20 Aligned_cols=193 Identities=20% Similarity=0.152 Sum_probs=133.7
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015609 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
..+..+.+|..+..-+ +...+.... .++.++|+ +++....+|+ +++++.|.+. .+.++||+.|+.++
T Consensus 29 ~pi~~~st~~~~~~~~-~~~~~~~~~-~~~~y~r~--~~p~~~~Le~----~lA~leg~~~-----al~~~sG~~Ai~~a 95 (431)
T PRK08248 29 VPIYQTTSYGFRDSEH-AANLFSLKE-FGNIYTRI--MNPTTDVFEK----RIAALEGGIG-----ALAVSSGQAAITYS 95 (431)
T ss_pred CCeeCCCccccCCHHH-HHhhhcccc-CCceeECC--CCchHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHH
Confidence 3456666665444322 222221111 13334444 5677777876 4899999876 47889999999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--
Q 015609 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS-- 311 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~-- 311 (403)
+.+++++||+|++....|++.+.-. ...+.. .+++++.+++ .|++++++++++ ++++|++...+
T Consensus 96 l~~ll~~GD~Vlv~~~~y~~t~~~~-----~~~~~~--~Gv~v~~vd~------~d~e~l~~ai~~-~tklV~l~sp~NP 161 (431)
T PRK08248 96 ILNIASAGDEIVSSSSLYGGTYNLF-----AHTLPK--LGITVKFVDP------SDPENFEAAITD-KTKALFAETIGNP 161 (431)
T ss_pred HHHHhCCCCEEEEccCchhhHHHHH-----HHHHHh--CCEEEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCC
Confidence 9999999999999988776643100 001112 2345555543 489999999875 68888876443
Q ss_pred CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeC
Q 015609 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRR 378 (403)
Q Consensus 312 ~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~ 378 (403)
+|.+.|+++|.++|+++|+++++|++++.+.. ..|++ ++|+++.|+||+++||. ||+++.+.
T Consensus 162 tG~v~di~~I~~la~~~gi~vIvD~t~a~~~~-----~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~ 227 (431)
T PRK08248 162 KGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL-----LRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSG 227 (431)
T ss_pred CCcccCHHHHHHHHHHcCCEEEEeCCCCcccc-----CChhHcCCCEEEEcCccccCCCCCceEEEEEeCC
Confidence 46789999999999999999999999876542 34444 49999999999998874 57666543
No 93
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=8.8e-16 Score=158.89 Aligned_cols=160 Identities=16% Similarity=0.236 Sum_probs=122.7
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
|++.++.+|+. ++++.|.++ .|.+.||+.|+.+++.+++++||+||++...|++... .+. ..+...
T Consensus 59 ~nPtv~~lE~~----la~leg~~~-----av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~--~~~---~~l~~~ 124 (432)
T PRK06702 59 GNPTLAAFEQK----LAELEGGVG-----AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFN--LFG---VSLRKL 124 (432)
T ss_pred CCcHHHHHHHH----HHHHhCCCc-----EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHH--HHH---HHHHHC
Confidence 67888888874 899999987 3778999999999999999999999999988876532 100 011222
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCC--ccccHHHHHHHHHHcCCEEEEeccccccccccccc
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYP--REWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL 348 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g--~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~ 348 (403)
| +++.+++ ..+|++++++++++ ++|+|+++...++ .+.|+++|+++|+++|+++++|++.+. +..
T Consensus 125 G--i~v~~vd-----~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~t-----P~~ 191 (432)
T PRK06702 125 G--IDVTFFN-----PNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLAT-----PYL 191 (432)
T ss_pred C--CEEEEEC-----CCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCc-----hhh
Confidence 3 4555543 24799999999975 6899988755444 578999999999999999999998643 334
Q ss_pred cCCCCc-ccEEEEcCcCCCcCCc---eEEEEEe
Q 015609 349 ASPFDY-CDIVTSTTHKSLRGPR---GGIIFFR 377 (403)
Q Consensus 349 ~~p~~~-aDivt~StHKtL~GP~---GG~I~~~ 377 (403)
..|+++ ||+++.|+.|++.|+. ||+++..
T Consensus 192 ~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~ 224 (432)
T PRK06702 192 CQAFEHGANIIVHSTTKYIDGHASSLGGIVIDG 224 (432)
T ss_pred CChhhcCCCEEEEccccccCCCcceeceEEEeC
Confidence 467764 9999999999999986 3766643
No 94
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.66 E-value=7.2e-16 Score=155.97 Aligned_cols=201 Identities=14% Similarity=0.101 Sum_probs=134.8
Q ss_pred ccceeccCccCcHHHHHHHHHHhhhcCC--CCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHH
Q 015609 153 GIELIASENFVCRAVMEALGSHLTNKYS--EGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSAN 230 (403)
Q Consensus 153 ~l~LiaSen~~~p~V~eA~~s~l~~~y~--eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An 230 (403)
.+.|.|+++.+++.|++||...+.+... .|.+. ..+...++.+.+++ ++++++++|+++.. |.+.+...|||.|+
T Consensus 4 ~~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~-~~hr~~~f~~~~~~-~~~~l~~l~~~~~~-~~v~~~~gsgt~~~ 80 (360)
T PRK05355 4 VYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVME-ISHRSKEFEAVAEE-AEADLRELLNIPDN-YKVLFLQGGASLQF 80 (360)
T ss_pred eeeccCCCCCCCHHHHHHHHHHhhccccCCccccc-cCCCCHHHHHHHHH-HHHHHHHHhCCCCC-cEEEEEcCCchHHH
Confidence 4678999999999999999987643211 11111 22334566666665 89999999998322 22434446789999
Q ss_pred HHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHH-HhccCCCcEEEEeC
Q 015609 231 FAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEE-KAMDYRPKILICGG 309 (403)
Q Consensus 231 ~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~-~i~~~~pklViv~~ 309 (403)
.+++.+++.+||++++.. .|.++|.+. +.+...|.. ..+.++++.+..+..++++ .+++ ++++|.+.+
T Consensus 81 Ea~~~nl~~~g~~~l~i~---~G~fg~r~~----~~a~~~g~~---~~~~~~~~~g~~~~~~~~~~~l~~-~~~~V~~th 149 (360)
T PRK05355 81 AMVPMNLLGGGKKADYVD---TGSWSKKAI----KEAKKYGEV---NVAASSEDDGFTYIPPLDEWQLSD-DAAYVHYTS 149 (360)
T ss_pred HHHHHhcCCCCCeEEEEE---CCHHHHHHH----HHHHHhCCc---eEEecccccCCCCCCChhhccCCC-CCCEEEEcc
Confidence 999999999999988876 344444421 122223321 2223333245556555555 5654 688886643
Q ss_pred --CCCCccc-cHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 310 --SSYPREW-DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 310 --s~~g~~~-Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+++|..+ |+++| +|++++||++|++|..+. +++..|++++|+||+| ||+| |+++.+++
T Consensus 150 ~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~i-----dv~~~d~~~~ssqK~l-gP~Glg~l~~s~~ 211 (360)
T PRK05355 150 NETIDGTEFHELPDT------GDVPLVADMSSDILSRPI-----DVSKFGLIYAGAQKNI-GPAGLTIVIVRED 211 (360)
T ss_pred CCCcceEecCccccc------CCCcEEEEcCccccCccC-----CHHHccEEEEeccccc-cCCceEEEEECHH
Confidence 4567776 66665 899999999999997642 3334689999999987 7999 77777764
No 95
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.66 E-value=2.2e-15 Score=157.15 Aligned_cols=169 Identities=17% Similarity=0.233 Sum_probs=115.4
Q ss_pred cchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhh
Q 015609 190 TGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSA 269 (403)
Q Consensus 190 ~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~ 269 (403)
.+.....+++ +.++++|+.++ .+.+++|++|+.+++.++++||| |++...-+..+. ..+.+
T Consensus 75 ~~~~g~~~Lr----eaia~~~~~~~-----vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~---------~~i~~ 135 (460)
T PRK13238 75 AGSRSYYRLE----DAVKDIFGYPY-----TIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTR---------AHIEL 135 (460)
T ss_pred CCCCCHHHHH----HHHHHHhCCCc-----EEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchH---------HHHHH
Confidence 3343344554 46899999875 36677899999999999999999 776543211111 11333
Q ss_pred cccceEEeeeecC---------CCCCCCCHHHHHHHhccC---CCcEEEEeCCCC--C-ccc---cHHHHHHHHHHcCCE
Q 015609 270 ASIFFESFPYKVN---------PQTGYIDYEKLEEKAMDY---RPKILICGGSSY--P-REW---DYGRFRQIADKCGAV 331 (403)
Q Consensus 270 ~g~~~~vv~~~vd---------~~~g~ID~d~Le~~i~~~---~pklViv~~s~~--g-~~~---Di~~I~~Iake~Ga~ 331 (403)
.|. +++.++++ +..+.+|+++|++++.+. ++++|+++.+++ | .+. ++++|+++|+++|++
T Consensus 136 ~G~--~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~ 213 (460)
T PRK13238 136 NGA--TAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIP 213 (460)
T ss_pred cCC--EEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 443 34444443 224569999999999753 578888765443 3 344 578999999999999
Q ss_pred EEEecccccc-cccc-----ccccCC--------CCcccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 332 LMCDMAHISG-LIAA-----KELASP--------FDYCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 332 LivDaAh~~G-lia~-----g~~~~p--------~~~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
|+.|+||..+ ++.. +..... ..++|++++|+||.+.||.||+|+++++
T Consensus 214 li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~ 275 (460)
T PRK13238 214 VVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIGGLLCFRDE 275 (460)
T ss_pred EEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcceeEEEcChH
Confidence 9999999764 2111 111111 1359999999999999999999999864
No 96
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.66 E-value=4.5e-16 Score=156.69 Aligned_cols=195 Identities=14% Similarity=0.122 Sum_probs=122.9
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCcccc-c---hHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe--CChH
Q 015609 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYT-G---NQYIDQIENLCFERALKAFDLDSDNWGVNVQP--YSCT 227 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~-G---~~~~~~lE~~arerla~lfg~~~~~~~v~V~~--~SGT 227 (403)
++|.|+++.+++.|+++|..++.+ |. ++|+..+. + .++.+.+++ +|++++++||++..+ .|+| .|||
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~~-~r~~l~~l~~~~~~~---~vvf~~gs~T 73 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVNE-AESDLRELLNIPDNY---KVLFLQGGAT 73 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHHH-HHHHHHHHhCCCCCc---eEEEEcCCch
Confidence 468999999999999999988754 32 55543322 2 355566664 899999999984321 3444 3599
Q ss_pred HHHHHHHhhhcc---CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHH-HHHHhccCCCc
Q 015609 228 SANFAVYTGLLL---PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEK-LEEKAMDYRPK 303 (403)
Q Consensus 228 ~An~aal~all~---pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~-Le~~i~~~~pk 303 (403)
.|+++++.++++ +||.|++.. +.|.+. ......| +++..++++++....++.+ .+..+. .++|
T Consensus 74 ~a~~~~~~~l~~~~~~~~~i~~g~------~~~~~~----~~a~~~g--~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~ 140 (355)
T cd00611 74 GQFAAVPLNLLGDKGTADYVVTGA------WSAKAA----KEAKRYG--GVVVIVAAKEEGKYTKIPDVETWDLA-PDAA 140 (355)
T ss_pred HHHHHHHHhcCCCCCeEEEEECCH------HHHHHH----HHHHhcC--CCcEEEecccccCCCCCCCHhhcCCC-CCCC
Confidence 999999999987 555565432 222210 0112223 3344444442212224222 223333 4688
Q ss_pred EEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 304 ILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 304 lViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+|.+.+.+ +|..+ .++++.+|++++||++|++|.++. +++..|+++++.||+| ||+| |+++.++.
T Consensus 141 lV~~~h~~t~tG~~~-----~~i~~~~g~~~~VDa~qs~g~~~i-----dv~~~~~~~ss~~K~l-GP~G~g~l~~~~~ 208 (355)
T cd00611 141 YVHYCSNETIHGVEF-----DEVPDTGGVPLVADMSSNILSRPI-----DVSKFGVIYAGAQKNL-GPAGVTVVIVRKD 208 (355)
T ss_pred EEEEeCCcccccEEc-----ceecccCCCeEEEEccccccCCCC-----CHHHhCEEEeeccccc-CCCceEEEEECHH
Confidence 88765443 45542 245666999999999999998642 3334677777799965 8998 88887764
No 97
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.66 E-value=8.1e-15 Score=152.10 Aligned_cols=163 Identities=18% Similarity=0.242 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh---------ccCCCeEEecCCCCCccccccccCCcc
Q 015609 194 YIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL---------LLPGDRIMGLDSPSGGHLSHGYHTPGG 264 (403)
Q Consensus 194 ~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al---------l~pGD~VL~~~~ehgghlsh~~~~~~~ 264 (403)
...++|+ ++++++|++. .+.++|||+|+.+++.++ ++|||+|+++...|.+..
T Consensus 64 ~~~~fe~----~lA~~~g~~~-----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~--------- 125 (438)
T PRK15407 64 FNDAFEK----KLAEFLGVRY-----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTV--------- 125 (438)
T ss_pred hHHHHHH----HHHHHhCCCe-----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHH---------
Confidence 3556664 5899999875 367788999999998876 489999999998764432
Q ss_pred chhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccc
Q 015609 265 KKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIA 344 (403)
Q Consensus 265 ~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia 344 (403)
..+...| +++++++++++++.+|++.+++++.. ++|+|++.. .+|...|+++|.++|+++|++|++|++|+.|...
T Consensus 126 ~~v~~~G--~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~-~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~ 201 (438)
T PRK15407 126 NPIIQNG--LVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAH-TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTY 201 (438)
T ss_pred HHHHHcC--CEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeC-CCCChhhHHHHHHHHHHCCCEEEEECccchhhhc
Confidence 1233333 46677777766788999999999864 688887764 4677789999999999999999999999999866
Q ss_pred cccccCCCCcccEEEEcCc--CCCcCCceEEEEEeCCC
Q 015609 345 AKELASPFDYCDIVTSTTH--KSLRGPRGGIIFFRRGK 380 (403)
Q Consensus 345 ~g~~~~p~~~aDivt~StH--KtL~GP~GG~I~~~~~~ 380 (403)
.+..... ..|+.++|+| |.+..-.||+|++++++
T Consensus 202 ~g~~~G~--~gd~~~fSf~~~k~~~~geGG~l~t~d~~ 237 (438)
T PRK15407 202 DGRMTGT--FGDIATLSFYPAHHITMGEGGAVFTNDPL 237 (438)
T ss_pred CCeeeec--cCceEEEeCCCCCCccccCceEEEECCHH
Confidence 5432222 2688888887 65665568999998863
No 98
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.65 E-value=7e-15 Score=149.00 Aligned_cols=162 Identities=14% Similarity=0.100 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh-ccCCCeEEecCCCCCccccccccCCccchhhhcc
Q 015609 193 QYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAAS 271 (403)
Q Consensus 193 ~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g 271 (403)
+..+++|+ ++++++|.++ .+.++|||+|+.+++.++ +++||+|+++...|.+.. ..+...|
T Consensus 31 ~~~~~~e~----~la~~~g~~~-----~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~---------~~~~~~G 92 (375)
T PRK11706 31 GFTRRCQQ----WLEQRFGSAK-----VLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTA---------NAFVLRG 92 (375)
T ss_pred HHHHHHHH----HHHHHhCCCe-----EEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHH---------HHHHHcC
Confidence 44566664 4788899875 366778999998887766 799999999987764432 1233334
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCC
Q 015609 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASP 351 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p 351 (403)
.+++.+++++++..+|++++++++.+ ++|+|++.. .+|...|+++|.++|+++|+++++|++|+.|....+. +
T Consensus 93 --~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~~-~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~---~ 165 (375)
T PRK11706 93 --AKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPVH-YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGR---A 165 (375)
T ss_pred --CEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEeC-CCCCccCHHHHHHHHHHcCCEEEEECccccccccCCe---e
Confidence 56778888876678999999999875 688887653 4788899999999999999999999999998632221 2
Q ss_pred CC-cccEEEEcCc--CCCcCCceEEEEEeCC
Q 015609 352 FD-YCDIVTSTTH--KSLRGPRGGIIFFRRG 379 (403)
Q Consensus 352 ~~-~aDivt~StH--KtL~GP~GG~I~~~~~ 379 (403)
+. ..|+.++|+| |.+....||+++++++
T Consensus 166 ~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~ 196 (375)
T PRK11706 166 LGTIGHIGCFSFHETKNYTAGEGGALLINDP 196 (375)
T ss_pred eecCcCEEEEeCCCCccccccCCeEEEECCH
Confidence 22 3688889988 9986666788888764
No 99
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.65 E-value=1.5e-15 Score=154.06 Aligned_cols=166 Identities=17% Similarity=0.208 Sum_probs=122.2
Q ss_pred CCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccC
Q 015609 182 GYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHT 261 (403)
Q Consensus 182 G~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~ 261 (403)
++.++|+ +++...++|+ ++++++|.++ .+.++||++|+.+++ .++++||+|++....+|+....
T Consensus 45 ~~~Y~R~--~~p~~~~le~----~lA~leg~~~-----~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~---- 108 (364)
T PRK07269 45 GFDYTRT--KNPTRAKLEE----TLAAIESADY-----ALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRW---- 108 (364)
T ss_pred CcceeCC--CCccHHHHHH----HHHHHhCCCe-----EEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHH----
Confidence 3445555 5677788876 4889999876 477889999999988 4679999999998777654310
Q ss_pred CccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEecccc
Q 015609 262 PGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 262 ~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
+....... .+.++ ...|++++++++.+ ++|+|+++..++ +...|+++|+++|+++|+++++|+|++
T Consensus 109 -----~~~~~~~~---~~~~~---~~~d~~~l~~~i~~-~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~ 176 (364)
T PRK07269 109 -----FNQQEKEG---RFHFT---YANTEEELIAAIEE-DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFY 176 (364)
T ss_pred -----HHHHHhcC---cEEEE---ecCCHHHHHHhcCc-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCc
Confidence 11100000 11111 23689999999874 689998876655 567899999999999999999999977
Q ss_pred ccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCCC
Q 015609 340 SGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRGK 380 (403)
Q Consensus 340 ~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~~ 380 (403)
.+.. ..|++ .+|++++|+||++.|+. ||+|++++++
T Consensus 177 ~~~~-----~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~ 216 (364)
T PRK07269 177 SPIY-----QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLE 216 (364)
T ss_pred cccc-----CCchhhCCcEEEecCceeccCCCcccceEEEeCcHH
Confidence 6542 34565 49999999999998865 7988887653
No 100
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.65 E-value=2.6e-15 Score=147.96 Aligned_cols=194 Identities=16% Similarity=0.138 Sum_probs=127.1
Q ss_pred ccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHh
Q 015609 158 ASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYT 235 (403)
Q Consensus 158 aSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~ 235 (403)
.|+|+. +|.|++++...+.. .. +| .......++ ++.+++++| +.. .+++.+||+|+.+++.
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~-----~~--~~-~~~~~~~~l----~~~~a~~~g-~~~----~~~~~~gt~a~~~~~~ 65 (338)
T cd06502 3 RSDTVTGPTPEMLEAMAAANVG-----DD--VY-GEDPTTAKL----EARAAELFG-KEA----ALFVPSGTAANQLALA 65 (338)
T ss_pred ccccCCCCCHHHHHHHHhcccC-----Cc--cc-CCCHHHHHH----HHHHHHHhC-CCe----EEEecCchHHHHHHHH
Confidence 466664 88999998764321 11 22 122333444 456889999 332 5677789999999999
Q ss_pred hhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc------CCCcEEEEeC
Q 015609 236 GLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD------YRPKILICGG 309 (403)
Q Consensus 236 all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~------~~pklViv~~ 309 (403)
+++++||+|++.+..|.++.... ......| .+++.++.+ .+.+|+++|++++.+ .++++|++..
T Consensus 66 ~l~~~gd~v~~~~~~~~~~~~~~------~~~~~~g--~~~~~v~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~ 135 (338)
T cd06502 66 AHTQPGGSVICHETAHIYTDEAG------APEFLSG--VKLLPVPGE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLEN 135 (338)
T ss_pred HhcCCCCeEEEecCcceeeecCC------cHHHHcC--ceEEeecCC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEe
Confidence 99999999999887764432110 0112233 344555554 367999999999874 2578877653
Q ss_pred -CCCCc---cccHHHHHHHHHHcCCEEEEeccccccccc-cccccCCC-CcccEEEEcCcCCCcCCceEEEEEeC
Q 015609 310 -SSYPR---EWDYGRFRQIADKCGAVLMCDMAHISGLIA-AKELASPF-DYCDIVTSTTHKSLRGPRGGIIFFRR 378 (403)
Q Consensus 310 -s~~g~---~~Di~~I~~Iake~Ga~LivDaAh~~Glia-~g~~~~p~-~~aDivt~StHKtL~GP~GG~I~~~~ 378 (403)
++.|. ..|+++|.++|+++|+++++|+||..+... .+...... ..+|+++.|+||++++|.|++++.++
T Consensus 136 p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~ 210 (338)
T cd06502 136 TTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNR 210 (338)
T ss_pred ecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCH
Confidence 34443 356788999999999999999998765321 12110111 24899999999999777666555544
No 101
>PLN02483 serine palmitoyltransferase
Probab=99.65 E-value=3.9e-15 Score=156.40 Aligned_cols=198 Identities=18% Similarity=0.150 Sum_probs=132.5
Q ss_pred ccceeccCccC-----cHHHHHHHHHHhhhcCCCCCCCCccccc-hHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCh
Q 015609 153 GIELIASENFV-----CRAVMEALGSHLTNKYSEGYPGARYYTG-NQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSC 226 (403)
Q Consensus 153 ~l~LiaSen~~-----~p~V~eA~~s~l~~~y~eG~pgsr~~~G-~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SG 226 (403)
.|+ ++|.||+ ++.+.++....+ .+|..+..++|...| .....++| +++++++|.+. .|.+++|
T Consensus 102 ~~n-~~s~~YLgl~~~~~~~~~~~~~ai-~~~g~~~~~sr~~~g~~~~~~ele----~~lA~~~g~~~-----ai~~~~G 170 (489)
T PLN02483 102 CLN-LGSYNYLGFAAADEYCTPRVIESL-KKYSASTCSSRVDGGTTKLHRELE----ELVARFVGKPA-----AIVFGMG 170 (489)
T ss_pred EEE-eecCCccCcCCCCHHHHHHHHHHH-HHhCCCCCccccccCCcHHHHHHH----HHHHHHhCCCc-----EEEECCH
Confidence 454 6799997 233444444333 335555667776555 34445555 46999999865 4778899
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc------C
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD------Y 300 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~------~ 300 (403)
+.+|.+++.+++++||.|++..+.|.+.. ..+...| .+++.++. .|++++++++++ .
T Consensus 171 ~~an~~~i~al~~~Gd~Vi~d~~~h~s~~---------~~~~~~G--a~v~~~~~------~d~~~le~~l~~~i~~~~p 233 (489)
T PLN02483 171 YATNSTIIPALIGKGGLIISDSLNHNSIV---------NGARGSG--ATIRVFQH------NTPSHLEEVLREQIAEGQP 233 (489)
T ss_pred HHHHHHHHHHhCCCCCEEEEcchhhHHHH---------HHHHHcC--CeEEEEeC------CCHHHHHHHHHhhhhcccc
Confidence 99999999999999999999988765432 1233344 34555553 256777666542 1
Q ss_pred C---C--cEEEEeCC---CCCccccHHHHHHHHHHcCCEEEEecccccccccc-c--ccc-CCC--CcccEEEEcCcCCC
Q 015609 301 R---P--KILICGGS---SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA-K--ELA-SPF--DYCDIVTSTTHKSL 366 (403)
Q Consensus 301 ~---p--klViv~~s---~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~-g--~~~-~p~--~~aDivt~StHKtL 366 (403)
+ | +++++..+ ..|...++++|.++|+++|++|++|.+|+.|.... | ... ..+ ..+|++++|++|+|
T Consensus 234 ~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~ 313 (489)
T PLN02483 234 RTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSF 313 (489)
T ss_pred ccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhc
Confidence 1 1 54444333 34667899999999999999999999999875431 1 110 111 24799999999987
Q ss_pred cCCceEEEEEeCC
Q 015609 367 RGPRGGIIFFRRG 379 (403)
Q Consensus 367 ~GP~GG~I~~~~~ 379 (403)
|+.||+|+.+++
T Consensus 314 -g~~GG~i~~~~~ 325 (489)
T PLN02483 314 -GSCGGYIAGSKE 325 (489)
T ss_pred -ccCceEEEcCHH
Confidence 667899987654
No 102
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=2.2e-15 Score=154.44 Aligned_cols=160 Identities=18% Similarity=0.214 Sum_probs=119.8
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
+++..+++|+ ++++++|++. .+.++||++|+.+++.+++++||+|++....|++...... ..+...
T Consensus 62 ~~p~~~~le~----~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~-----~~~~~~ 127 (398)
T PRK08249 62 TNPTVQAFEE----KVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFT-----EFLPRM 127 (398)
T ss_pred CChHHHHHHH----HHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHH-----HHHhhC
Confidence 6677777775 5899999876 4788999999999999999999999999988765421100 001112
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccc
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL 348 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~ 348 (403)
| +++..++ ..|++++++++++ ++|+|+++..+ +|.+.|+++|.++|+++|+++++|++|+.+...
T Consensus 128 G--i~v~~vd------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~---- 194 (398)
T PRK08249 128 G--VDVTLCE------TGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQ---- 194 (398)
T ss_pred C--eEEEEcC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccC----
Confidence 2 3444332 3689999999975 68999886544 467899999999999999999999999876432
Q ss_pred cCCCC-cccEEEEcCcCCCcCCc---eEEEEEeC
Q 015609 349 ASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRR 378 (403)
Q Consensus 349 ~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~ 378 (403)
.++. .+|+++.|++|+++|+. ||+++.++
T Consensus 195 -~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~ 227 (398)
T PRK08249 195 -NPLALGADLVIHSATKFLSGHADALGGVVCGSK 227 (398)
T ss_pred -CchhhCCCEEeccCceecCCCCCceEEEEECCH
Confidence 2333 49999999999998764 57777644
No 103
>PLN02880 tyrosine decarboxylase
Probab=99.65 E-value=2e-15 Score=158.70 Aligned_cols=179 Identities=16% Similarity=0.108 Sum_probs=124.9
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCC----cceEEeCChHHHHHHHHhhhcc-----C-----CC-eEEecCCCCCcccc
Q 015609 192 NQYIDQIENLCFERALKAFDLDSDNW----GVNVQPYSCTSANFAVYTGLLL-----P-----GD-RIMGLDSPSGGHLS 256 (403)
Q Consensus 192 ~~~~~~lE~~arerla~lfg~~~~~~----~v~V~~~SGT~An~aal~all~-----p-----GD-~VL~~~~ehgghls 256 (403)
.+...++|+.+.+++++++|.+...| +..++.++||+||+.++.+.-. . .. .|+++... |.|
T Consensus 117 sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~a---H~S 193 (490)
T PLN02880 117 SPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQT---HSA 193 (490)
T ss_pred CcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCc---hHH
Confidence 34567899999999999999986432 2245566789999888765421 1 12 34444433 333
Q ss_pred ccccCCccchhhhcccce-EEeeeecCC-CCCCCCHHHHHHHhccC-----CCcEEEE--eCCCCCccccHHHHHHHHHH
Q 015609 257 HGYHTPGGKKVSAASIFF-ESFPYKVNP-QTGYIDYEKLEEKAMDY-----RPKILIC--GGSSYPREWDYGRFRQIADK 327 (403)
Q Consensus 257 h~~~~~~~~~v~~~g~~~-~vv~~~vd~-~~g~ID~d~Le~~i~~~-----~pklViv--~~s~~g~~~Di~~I~~Iake 327 (403)
+. |.+.+.|.+. .++.+++|. +++.+|+++|+++|.+. .|-+|+. +.+.+|.+.|+++|+++|++
T Consensus 194 ---v~---Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~ 267 (490)
T PLN02880 194 ---LQ---KACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKS 267 (490)
T ss_pred ---HH---HHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHH
Confidence 22 4556667542 234455653 25689999999998642 2555544 34567889999999999999
Q ss_pred cCCEEEEecccccccccccccc---CCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 328 CGAVLMCDMAHISGLIAAKELA---SPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 328 ~Ga~LivDaAh~~Glia~g~~~---~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+|+++|||+||+.+....+.+. ..++.||.++.++||||+.|.+ |++++++.
T Consensus 268 ~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~ 323 (490)
T PLN02880 268 NGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDR 323 (490)
T ss_pred cCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCH
Confidence 9999999999998866443221 1233599999999999999998 88888763
No 104
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.65 E-value=4.9e-15 Score=149.15 Aligned_cols=199 Identities=24% Similarity=0.293 Sum_probs=137.5
Q ss_pred ccceeccCcc----CcHHHHHHHHHHhhhcCCCCCCCCccccchH-HHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015609 153 GIELIASENF----VCRAVMEALGSHLTNKYSEGYPGARYYTGNQ-YIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 153 ~l~LiaSen~----~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~-~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
-|+|..+ ++ .+|.+++++...+.. +..++++.++..|.. ..++ .++.+++++|.+. .|.+++|+
T Consensus 44 ~i~l~~~-~~~~~~~~~~i~~a~~~~~~~-~~~~~~~~~~~~G~~~l~~~----l~~~la~~~g~~~-----~i~~tsG~ 112 (397)
T PRK06939 44 VINFCAN-NYLGLANHPELIAAAKAALDS-HGFGMASVRFICGTQDLHKE----LEEKLAKFLGTED-----AILYSSCF 112 (397)
T ss_pred EEEeecc-CccccCCCHHHHHHHHHHHHH-cCCCCcccccccCCcHHHHH----HHHHHHHHhCCCc-----EEEEcChH
Confidence 3665533 33 588899988877644 333455555555653 3333 3456889999764 57888999
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc---C--CC
Q 015609 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD---Y--RP 302 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~---~--~p 302 (403)
+++.+++.++++|||+|++.+..|.+.. ..+...+. +++.++ .+|++++++++++ . ++
T Consensus 113 ~a~~~~~~~l~~~gd~vi~~~~~~~~~~---------~~~~~~~~--~~~~~~------~~d~~~l~~~i~~~~~~~~~~ 175 (397)
T PRK06939 113 DANGGLFETLLGKEDAIISDALNHASII---------DGVRLCKA--KRYRYA------NNDMADLEAQLKEAKEAGARH 175 (397)
T ss_pred HHHHHHHHHhCCCCCEEEEEhhhhHHHH---------HHHHhcCC--ceEEeC------CCCHHHHHHHHHhhhccCCCC
Confidence 9999999999999999999987764432 11233332 233332 2689999988864 2 56
Q ss_pred cEEEEeC--CCCCccccHHHHHHHHHHcCCEEEEecccccccccc-cc--cc-CCC-CcccEEEEcCcCCCcCCceEEEE
Q 015609 303 KILICGG--SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA-KE--LA-SPF-DYCDIVTSTTHKSLRGPRGGIIF 375 (403)
Q Consensus 303 klViv~~--s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~-g~--~~-~p~-~~aDivt~StHKtL~GP~GG~I~ 375 (403)
++|+++. +..|...++++|.++|+++|+++++|++|..|.... +. .. ..+ +.+|++++|+||+|.|++||+++
T Consensus 176 ~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~ 255 (397)
T PRK06939 176 KLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTA 255 (397)
T ss_pred eEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEE
Confidence 7777653 335677899999999999999999999998775432 11 00 011 13789999999999888999998
Q ss_pred EeCC
Q 015609 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
.+++
T Consensus 256 ~~~~ 259 (397)
T PRK06939 256 GRKE 259 (397)
T ss_pred eCHH
Confidence 8754
No 105
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.65 E-value=2.7e-15 Score=153.75 Aligned_cols=168 Identities=18% Similarity=0.191 Sum_probs=124.2
Q ss_pred CCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccC
Q 015609 182 GYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHT 261 (403)
Q Consensus 182 G~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~ 261 (403)
|+.++|| +++...+||+ ++++++|.+. .+.++||+.|+.+++.+++++||+|++....|++.+.-..
T Consensus 55 ~~~Y~r~--~~p~~~~Le~----~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~-- 121 (400)
T PRK06234 55 GYIYSRL--GNPTSTEVEN----KLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLN-- 121 (400)
T ss_pred CCcccCC--CCccHHHHHH----HHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHH--
Confidence 3334444 4556667765 5899999875 4778899999999999999999999999877765432100
Q ss_pred CccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHc--CCEEEEecc
Q 015609 262 PGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKC--GAVLMCDMA 337 (403)
Q Consensus 262 ~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~--Ga~LivDaA 337 (403)
..+...| .++..++. .|++++++++.+ ++|+|+++..+ +|.+.|+++|.++|+++ |+++++|++
T Consensus 122 ---~~~~~~G--~~v~~vd~------~d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea 189 (400)
T PRK06234 122 ---HGLTRYG--VEVTFVDT------SNLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNT 189 (400)
T ss_pred ---HHHhhCC--eEEEEECC------CCHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECC
Confidence 0112223 44555443 389999999874 68998887554 46789999999999997 999999999
Q ss_pred ccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 338 HISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 338 h~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
++.+... .++. .+|++++|++|++.|+. ||+++++++
T Consensus 190 ~~~~~~~-----~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~ 230 (400)
T PRK06234 190 FCTPYIQ-----RPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEE 230 (400)
T ss_pred CCchhcC-----CchhhCCcEEEeeccccccCCCCceeEEEEecHH
Confidence 9887532 3444 48999999999998865 699888764
No 106
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=2.9e-15 Score=153.91 Aligned_cols=161 Identities=23% Similarity=0.263 Sum_probs=119.7
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
+++..++||+ ++++++|++. .+.++||++|+.+++.+++++||+|++....|++..... +.. ..
T Consensus 58 ~~p~~~~Le~----~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~------~~~-~~ 121 (405)
T PRK08776 58 GNPTRDLLGE----ALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLF------NAL-AK 121 (405)
T ss_pred CChHHHHHHH----HHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHH------HHH-HH
Confidence 4566677765 5889999865 478889999999999999999999999887776532100 011 11
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccc
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL 348 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~ 348 (403)
..+.+++.++ ..|++++++++++ ++|+|++..++ +|.+.|+++|.++|+++|+++++|++|+.+..
T Consensus 122 ~~g~~v~~v~------~~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~----- 189 (405)
T PRK08776 122 KGHFALITAD------LTDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL----- 189 (405)
T ss_pred hcCcEEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 1123344332 2589999998864 68998876554 45789999999999999999999999987642
Q ss_pred cCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 349 ASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 349 ~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
..|+. ++|++++|+||+|.||. ||+++++++
T Consensus 190 ~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~ 224 (405)
T PRK08776 190 QKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDA 224 (405)
T ss_pred CCcccccCCEEEecCceeecCCCCceEEEEEeCCH
Confidence 24555 48999999999999885 688877654
No 107
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.64 E-value=3e-15 Score=152.89 Aligned_cols=160 Identities=18% Similarity=0.217 Sum_probs=120.0
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
+++..+++|+ ++++++|++. .+.++||+.|+.+++. ++++||+|+++...|++.+... .+.+...
T Consensus 52 ~~p~~~~le~----~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~-----~~~~~~~ 116 (390)
T PRK08064 52 GNPTREALED----IIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMI-----TEVLSRF 116 (390)
T ss_pred CChhHHHHHH----HHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHH-----HHHHHHc
Confidence 5666777765 5999999986 4778999999988886 7899999999998887654211 0111222
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccc
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL 348 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~ 348 (403)
| .++..+++ .|++++++++.+ ++++|+++.++ +|.+.|+++|.++|+++|+++++|++++.+...
T Consensus 117 G--~~v~~v~~------~d~~~l~~~l~~-~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~---- 183 (390)
T PRK08064 117 G--IEHTFVDM------TNLEEVAQNIKP-NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQ---- 183 (390)
T ss_pred C--CEEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCccccc----
Confidence 3 34444443 378999988864 68998887554 467899999999999999999999998876432
Q ss_pred cCCCC-cccEEEEcCcCCCcCCce---EEEEEeCC
Q 015609 349 ASPFD-YCDIVTSTTHKSLRGPRG---GIIFFRRG 379 (403)
Q Consensus 349 ~~p~~-~aDivt~StHKtL~GP~G---G~I~~~~~ 379 (403)
.+++ .+|+++.|+||++.||.| |+++++++
T Consensus 184 -~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~ 217 (390)
T PRK08064 184 -KPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDE 217 (390)
T ss_pred -CchhhCCcEEEeecceeccCCccceeEEEEeCCH
Confidence 3333 489999999999998864 88887654
No 108
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.64 E-value=4.5e-15 Score=153.46 Aligned_cols=192 Identities=19% Similarity=0.191 Sum_probs=132.9
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015609 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
..+..+.+|..+..-+. ...+..+. .++.++|+ +++...++|+ ++++++|.+. .+.++||++|+.++
T Consensus 23 ~pi~~~~~~~~~~~~~~-~~~~~~~~-~~~~y~r~--~~pt~~~Le~----~lA~l~g~~~-----~l~~ssG~~Ai~~a 89 (425)
T PRK06084 23 VPIYQTTSYAFDDTQHG-ADLFDLKV-PGNIYTRI--MNPTNDVLEQ----RVAALEGGVG-----ALAVASGMAAITYA 89 (425)
T ss_pred CCEeCCCCcccCCHHHH-HHhhcccc-CCccccCC--CCchHHHHHH----HHHHHhCCCc-----eeEehhHHHHHHHH
Confidence 35566667764443222 21221111 13445554 5666777775 5899999876 36788999999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcc-cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC-
Q 015609 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAAS-IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS- 311 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g-~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~- 311 (403)
+.+++++||+|++....|++... .+ ..... .++++.+++ ..|++++++++++ ++++|++...+
T Consensus 90 l~al~~~Gd~Vl~~~~~Y~~t~~--~~------~~~l~~~gi~v~~~d------~~d~e~le~ai~~-~tklV~lesp~N 154 (425)
T PRK06084 90 IQTIAEAGDNIVSVAKLYGGTYN--LL------AHTLPRIGIETRFAA------HDDIAALEALIDE-RTKAVFCESIGN 154 (425)
T ss_pred HHHHhCCCCEEEEeCCCcchHHH--HH------HHhcccceeEEEEEC------CCCHHHHHHHhcc-CCcEEEEeCCCC
Confidence 99999999999999877765431 10 01111 123333332 2589999999875 68988886443
Q ss_pred -CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeC
Q 015609 312 -YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRR 378 (403)
Q Consensus 312 -~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~ 378 (403)
+|.+.|+++|.++|+++|+++++|++|+.+.. ..|++ ++|++++|+||++.|+. ||+++.+.
T Consensus 155 PtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~-----~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~ 221 (425)
T PRK06084 155 PAGNIIDIQALADAAHRHGVPLIVDNTVATPVL-----CRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSG 221 (425)
T ss_pred CCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----CChhhcCCCEEEECchhcccccccceeEEEEeCC
Confidence 46789999999999999999999999987753 24555 49999999999998875 67777543
No 109
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.64 E-value=1.9e-15 Score=154.28 Aligned_cols=165 Identities=15% Similarity=0.118 Sum_probs=119.8
Q ss_pred CCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccC
Q 015609 182 GYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHT 261 (403)
Q Consensus 182 G~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~ 261 (403)
++.++|+ |++.++++|+. +++++|.++ .|.++|||.|+++++.+++++||+|+++...+++.+... .
T Consensus 55 ~~~Y~r~--~~P~~~~lE~~----la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~--~ 121 (384)
T PRK06434 55 PYIYTRW--GNPTVQAFEEK----YAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFF--N 121 (384)
T ss_pred CcceeCC--CChhHHHHHHH----HHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHH--H
Confidence 3445555 78899999974 899999987 488999999999999999999999999877666654210 0
Q ss_pred CccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEecccc
Q 015609 262 PGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 262 ~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
..+... ++++..+++++. ..++ +...++|+|++...++ +.+.|+++|+++||++| +++|++|+
T Consensus 122 ---~~~~~~--Gi~v~fvd~~~~-~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~ 186 (384)
T PRK06434 122 ---KVLKTL--GIHVDYIDTDRL-NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFA 186 (384)
T ss_pred ---HHHHhc--CcEEEEECCCCh-hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCC
Confidence 111222 345666665431 1122 2223578888875543 47899999999999998 56799986
Q ss_pred ccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 340 SGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 340 ~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.+. ...|++ ++|++++|+||+|.|+. ||+|+++++
T Consensus 187 s~~-----~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~ 225 (384)
T PRK06434 187 SPY-----NQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNK 225 (384)
T ss_pred Ccc-----cCCchhcCCCEEEeecccccCCCCCceEEEEecCcH
Confidence 553 335666 59999999999999876 788888765
No 110
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.64 E-value=8.8e-16 Score=151.91 Aligned_cols=170 Identities=18% Similarity=0.103 Sum_probs=120.0
Q ss_pred hHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCChHHHHHHHHhhhcc------------CCC--eEEecCCCCCcccc
Q 015609 192 NQYIDQIENLCFERALKAFDLD-SDNWGVNVQPYSCTSANFAVYTGLLL------------PGD--RIMGLDSPSGGHLS 256 (403)
Q Consensus 192 ~~~~~~lE~~arerla~lfg~~-~~~~~v~V~~~SGT~An~aal~all~------------pGD--~VL~~~~ehgghls 256 (403)
.+...++|+.++++++++||.+ ... ..+++++||+||+.++.++.. +++ .|+++...|.+..
T Consensus 33 ~~~~~~le~~~~~~~~~~~g~~~~~~--~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~- 109 (345)
T cd06450 33 SPAATEMEAEVVNWLAKLFGLPSEDA--DGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVE- 109 (345)
T ss_pred CchhHHHHHHHHHHHHHHhCCCCCCC--CEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHH-
Confidence 4456788888999999999986 222 135666899999999988742 333 6777776654321
Q ss_pred ccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC-----CCcEEEEeC--CCCCccccHHHHHHHHHHcC
Q 015609 257 HGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY-----RPKILICGG--SSYPREWDYGRFRQIADKCG 329 (403)
Q Consensus 257 h~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~-----~pklViv~~--s~~g~~~Di~~I~~Iake~G 329 (403)
+.+...| .+++.+++++ ++.+|+++|++++.+. ++++|++.. +.+|...|+++|+++|+++|
T Consensus 110 --------~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~ 178 (345)
T cd06450 110 --------KAAAYLD--VKVRLVPVDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYD 178 (345)
T ss_pred --------HHHHHHh--cCeEEeeeCC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhC
Confidence 1223334 3455666664 4689999999998751 466665543 34678899999999999999
Q ss_pred CEEEEecccccccccccccc---CCCCcccEEEEcCcCCCcCCce-EEEE
Q 015609 330 AVLMCDMAHISGLIAAKELA---SPFDYCDIVTSTTHKSLRGPRG-GIIF 375 (403)
Q Consensus 330 a~LivDaAh~~Glia~g~~~---~p~~~aDivt~StHKtL~GP~G-G~I~ 375 (403)
+++++|+||+.|..+..... ..+..+|++++++||++++|.| |+++
T Consensus 179 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~ 228 (345)
T cd06450 179 LWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVL 228 (345)
T ss_pred CeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHH
Confidence 99999999998876422111 1123589999999999988876 6554
No 111
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.64 E-value=3.5e-15 Score=152.11 Aligned_cols=170 Identities=24% Similarity=0.266 Sum_probs=129.5
Q ss_pred CCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccC
Q 015609 182 GYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHT 261 (403)
Q Consensus 182 G~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~ 261 (403)
++.++|+ |+++.+.+|+ ++++|-|++. .+.|.||+.|+.+++.+++++||+|+.....|||.+.. +
T Consensus 54 ~~~Y~R~--~nPT~~~lE~----~~a~LEg~~~-----~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~--~- 119 (396)
T COG0626 54 GYDYSRT--GNPTRDALEE----ALAELEGGED-----AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRL--F- 119 (396)
T ss_pred CcccccC--CCccHHHHHH----HHHHhhCCCc-----EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHH--H-
Confidence 4555555 6888999987 4889999887 47889999999999999999999999999888876421 1
Q ss_pred CccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCC--ccccHHHHHHHHHHcCCEEEEecccc
Q 015609 262 PGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYP--REWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 262 ~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g--~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
..+ +...++++.+++. -|.+++++++.+.++|+|+++.+++| .+.||++|+++||++|++++||.+-+
T Consensus 120 ---~~~-l~~~gi~~~~~d~------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfa 189 (396)
T COG0626 120 ---EKI-LQKFGVEVTFVDP------GDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFA 189 (396)
T ss_pred ---HHH-HHhcCeEEEEECC------CChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcc
Confidence 011 1112245554431 34556666666457899999977766 58999999999999999999999844
Q ss_pred ccccccccccCCCCc-ccEEEEcCcCCCcCCc---eEEEEEeCCC
Q 015609 340 SGLIAAKELASPFDY-CDIVTSTTHKSLRGPR---GGIIFFRRGK 380 (403)
Q Consensus 340 ~Glia~g~~~~p~~~-aDivt~StHKtL~GP~---GG~I~~~~~~ 380 (403)
.++++.|++. |||++.|+.|+|.|+. ||+++++++.
T Consensus 190 -----tP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~ 229 (396)
T COG0626 190 -----TPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEE 229 (396)
T ss_pred -----cccccChhhcCCCEEEEeccccccCCcceeeeEEecChHH
Confidence 4556788885 9999999999999986 6877766653
No 112
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.64 E-value=4e-15 Score=152.29 Aligned_cols=194 Identities=15% Similarity=0.078 Sum_probs=133.9
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015609 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
..+..+.+|..+..-+ +...+..+ ..++.++|| +++..+++|+ ++++++|.+. .+.+.|||+|+.++
T Consensus 30 ~pi~~~s~~~~~~~~~-~~~~~~~~-~~~~~Y~r~--~~pt~~~Le~----~lA~l~g~~~-----~l~~~sgt~Ai~~~ 96 (394)
T PRK07050 30 TPVARASTVVFPDLAT-MRALDWRQ-DVQWRYGLH--ATPTSLALAQ----RLAEIEGGRH-----ALLQPSGLAAISLV 96 (394)
T ss_pred CCeeCCcceecCCHHH-HHhhcccc-cCCcccCCC--CCHHHHHHHH----HHHHHhCCCe-----EEEeccHHHHHHHH
Confidence 3455566665444322 22111111 124445665 7787888876 4889999875 36678999999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC-
Q 015609 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY- 312 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~- 312 (403)
+.++++|||+|++....|++...... ......| +++..++. .+.+++++++++ ++|+|+++..++
T Consensus 97 l~al~~~GD~Vl~~~~~y~~~~~~~~-----~~~~~~G--i~v~~vd~------~~~~~l~~~i~~-~tklV~le~p~Np 162 (394)
T PRK07050 97 YFGLVKAGDDVLIPDNAYGPNRDHGE-----WLARDFG--ITVRFYDP------LIGAGIADLIQP-NTRLIWLEAPGSV 162 (394)
T ss_pred HHHHhCCCCEEEEecCCcccHHHHHH-----HHHHhcC--eEEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCC
Confidence 99999999999999988765431100 0111222 44555442 145788888864 689998875544
Q ss_pred -CccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 313 -PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 313 -g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
+...|+++|+++|+++|+++++|++|+.|.. ..|++ ++|+++.|++|++.|.. ||+++++++
T Consensus 163 ~~~~~di~~I~~ia~~~gi~livD~a~a~~~~-----~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~ 229 (394)
T PRK07050 163 TMEVPDVPAITAAARARGVVTAIDNTYSAGLA-----FKPFEHGVDISVQALTKYQSGGSDVLMGATITADA 229 (394)
T ss_pred CccHhhHHHHHHHHHHcCCEEEEECCcccccc-----cCHHHcCCeEEEEECCceecCCCCeeEEEEEECCH
Confidence 4678999999999999999999999998754 23444 48999999999997653 788888664
No 113
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.64 E-value=6.2e-15 Score=150.12 Aligned_cols=200 Identities=24% Similarity=0.269 Sum_probs=138.4
Q ss_pred cccceeccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccch-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCh
Q 015609 152 KGIELIASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTGN-QYIDQIENLCFERALKAFDLDSDNWGVNVQPYSC 226 (403)
Q Consensus 152 ~~l~LiaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G~-~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SG 226 (403)
+.+..+.|++|+ +|+|++++...+ .+|..+..++|...|. +...++| +++++++|.+. .++++||
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~-~~~~~~~~~s~~~~g~~~~~~~Le----~~la~~~g~~~-----~l~~~sG 114 (402)
T TIGR01821 45 KDVTVWCSNDYLGMGQHPEVLQAMHETL-DKYGAGAGGTRNISGTNIPHVELE----AELADLHGKES-----ALVFTSG 114 (402)
T ss_pred eeEEEeEccCcCCCCCCHHHHHHHHHHH-HHcCCCCcchhhhhCCcHHHHHHH----HHHHHHhCCCe-----EEEECch
Confidence 346678999998 899999998776 4565566666655443 3444555 46899999764 4788999
Q ss_pred HHHHHHHHhhhcc--CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC---C
Q 015609 227 TSANFAVYTGLLL--PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY---R 301 (403)
Q Consensus 227 T~An~aal~all~--pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~---~ 301 (403)
++||..++..+.. +++.|+.....|+..+. .+...+. .+..++ ..|+++++++++.. +
T Consensus 115 ~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~---------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~ 177 (402)
T TIGR01821 115 YVANDATLATLAKIIPGCVIFSDELNHASMIE---------GIRHSGA--EKFIFR------HNDVAHLEKLLQSVDPNR 177 (402)
T ss_pred HHHHHHHHHHhhCCCCCCEEEEcchHhHHHHH---------HHHHcCC--eEEEEC------CCCHHHHHHHHHhccCCC
Confidence 9999999988765 78888777655433221 1222332 223332 24788888888632 4
Q ss_pred CcEEEEeCC--CCCccccHHHHHHHHHHcCCEEEEecccccccccc---cccc-CCC-CcccEEEEcCcCCCcCCceEEE
Q 015609 302 PKILICGGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA---KELA-SPF-DYCDIVTSTTHKSLRGPRGGII 374 (403)
Q Consensus 302 pklViv~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~---g~~~-~p~-~~aDivt~StHKtL~GP~GG~I 374 (403)
+++|+++.. ..|.+.|+++|.++|+++|++|++|++|+.|.... +... ..+ +..|+++.|+.|+|+ ..||++
T Consensus 178 ~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g-~~GG~i 256 (402)
T TIGR01821 178 PKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFG-VVGGYI 256 (402)
T ss_pred CeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhc-cCCcee
Confidence 678877643 35788999999999999999999999999886532 1111 111 136899999999984 567888
Q ss_pred EEeCC
Q 015609 375 FFRRG 379 (403)
Q Consensus 375 ~~~~~ 379 (403)
+++++
T Consensus 257 ~~~~~ 261 (402)
T TIGR01821 257 AASRK 261 (402)
T ss_pred ecCHH
Confidence 77653
No 114
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.63 E-value=4.9e-15 Score=152.65 Aligned_cols=165 Identities=20% Similarity=0.152 Sum_probs=120.2
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCC
Q 015609 183 YPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTP 262 (403)
Q Consensus 183 ~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~ 262 (403)
+.++|+ +++...++|+ ++++++|.+. .++++||+.|+.+++.+++++||+|++....|++..... .
T Consensus 49 ~~ysr~--~~p~~~~le~----~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~--~- 114 (418)
T TIGR01326 49 NIYSRL--MNPTTDVLEQ----RIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLF--K- 114 (418)
T ss_pred ceeECC--CChhHHHHHH----HHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH--H-
Confidence 334555 5566666665 5999999865 477889999999999999999999999988776643210 0
Q ss_pred ccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEeccccc
Q 015609 263 GGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHIS 340 (403)
Q Consensus 263 ~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~~ 340 (403)
..+...| ++++.++. .|++++++++.+ ++++|++...++ +.+.|+++|+++|+++|+++++|++|+.
T Consensus 115 --~~~~~~G--~~v~~v~~------~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~ 183 (418)
T TIGR01326 115 --HTLKRLG--IEVRFVDP------DDPEEFEKAIDE-NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFAT 183 (418)
T ss_pred --HHHHHcC--cEEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCch
Confidence 1112223 34555442 289999999874 688888875544 4678999999999999999999999987
Q ss_pred cccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEe
Q 015609 341 GLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFR 377 (403)
Q Consensus 341 Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~ 377 (403)
|.. ..+++ ++|++++|++|++.|+. ||+++.+
T Consensus 184 ~~~-----~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 184 PYL-----CRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred hhc-----CCchhcCCeEEEECccccccCCccceEEEEEec
Confidence 632 23444 49999999999997653 4555533
No 115
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.63 E-value=9.6e-15 Score=148.82 Aligned_cols=200 Identities=21% Similarity=0.247 Sum_probs=136.4
Q ss_pred cccceeccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccc-hHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCh
Q 015609 152 KGIELIASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTG-NQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSC 226 (403)
Q Consensus 152 ~~l~LiaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G-~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SG 226 (403)
+.+..++|+||+ +|.|++++...+. +|..+..++|.+.| .+...++| +++++++|.+. .++++||
T Consensus 46 ~~~~~~~s~dylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~l~----~~la~~~g~~~-----~~~~~sG 115 (407)
T PRK09064 46 REVTVWCSNDYLGMGQHPKVIEAMIEALD-RCGAGAGGTRNISGTNHYHVELE----RELADLHGKEA-----ALVFTSG 115 (407)
T ss_pred ceEEEEECCCCcCCCCCHHHHHHHHHHHH-HcCCCCCCcCcCccCHHHHHHHH----HHHHHHhCCCc-----EEEECcH
Confidence 346678899997 8999999987764 45545555555444 34445555 45889999654 5788999
Q ss_pred HHHHHHHHhhhcc--CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc---CC
Q 015609 227 TSANFAVYTGLLL--PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD---YR 301 (403)
Q Consensus 227 T~An~aal~all~--pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~---~~ 301 (403)
++||..++..+.. +++.|+.....|.+.+ ..+...+. .+..++ ..|+++++++++. .+
T Consensus 116 ~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~---------~~~~~~~~--~~~~~~------~~d~~~le~~l~~~~~~~ 178 (407)
T PRK09064 116 YVSNDATLSTLAKLIPDCVIFSDELNHASMI---------EGIRRSRC--EKHIFR------HNDVAHLEELLAAADPDR 178 (407)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCcchHHHH---------HHHHHcCC--cEEEEC------CCCHHHHHHHHHhccCCC
Confidence 9999999988754 7777776655443221 11222222 223332 2478899888863 35
Q ss_pred CcEEEEeCC--CCCccccHHHHHHHHHHcCCEEEEecccccccccc-c--ccc-CCC-CcccEEEEcCcCCCcCCceEEE
Q 015609 302 PKILICGGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA-K--ELA-SPF-DYCDIVTSTTHKSLRGPRGGII 374 (403)
Q Consensus 302 pklViv~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~-g--~~~-~p~-~~aDivt~StHKtL~GP~GG~I 374 (403)
+++|+++.. ..|...|+++|.++|+++|++|++|++|+.|.... | ... ..+ +..|+++.|++|+| |..||++
T Consensus 179 ~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~~ 257 (407)
T PRK09064 179 PKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMGGYI 257 (407)
T ss_pred CeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhh-hccCceE
Confidence 678877643 34678899999999999999999999999886431 1 110 111 23689999999987 5678888
Q ss_pred EEeCC
Q 015609 375 FFRRG 379 (403)
Q Consensus 375 ~~~~~ 379 (403)
+++++
T Consensus 258 ~~~~~ 262 (407)
T PRK09064 258 AGSAA 262 (407)
T ss_pred ecCHH
Confidence 87654
No 116
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.63 E-value=4.1e-15 Score=151.85 Aligned_cols=166 Identities=22% Similarity=0.238 Sum_probs=123.5
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCC
Q 015609 183 YPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTP 262 (403)
Q Consensus 183 ~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~ 262 (403)
+.++|| +++..+.||+ ++++++|.+. .+.+.||++|+.+++.++++|||+|++....|++.....
T Consensus 44 ~~Y~R~--~~pt~~~L~~----~lA~l~g~~~-----~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~---- 108 (386)
T PRK08045 44 HDYSRR--GNPTRDVVQR----ALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLF---- 108 (386)
T ss_pred ceeeCC--CCccHHHHHH----HHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHH----
Confidence 344555 5666777765 5899999753 467889999999999999999999999998876643210
Q ss_pred ccchhhhcccc-eEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEecccc
Q 015609 263 GGKKVSAASIF-FESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 263 ~~~~v~~~g~~-~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
..+.... +++..+ + ..|++++++++++ ++|+|+++.+++ |.+.|+++|.++|+++|+++++|+++.
T Consensus 109 ----~~~~~~~gi~v~~v--d----~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~ 177 (386)
T PRK08045 109 ----DSLAKRGCYRVLFV--D----QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFL 177 (386)
T ss_pred ----HHHHhhCCeEEEEe--C----CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCC
Confidence 0111111 233332 2 3689999998865 689998876554 578999999999999999999999988
Q ss_pred ccccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 340 SGLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 340 ~Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.+.. ..|+. .+|+++.|+||++.|+. +|+++++++
T Consensus 178 ~~~~-----~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~ 216 (386)
T PRK08045 178 SPAL-----QNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDP 216 (386)
T ss_pred cccc-----CCchhhCCCEEEeecceeccCCCCceeEEEEeCcH
Confidence 7643 34555 49999999999999987 588877654
No 117
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.63 E-value=1.3e-14 Score=148.33 Aligned_cols=200 Identities=21% Similarity=0.246 Sum_probs=139.2
Q ss_pred cccceeccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccch-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCh
Q 015609 152 KGIELIASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTGN-QYIDQIENLCFERALKAFDLDSDNWGVNVQPYSC 226 (403)
Q Consensus 152 ~~l~LiaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G~-~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SG 226 (403)
+.+.+++|++|+ +|+|++++...+. +|..+..+++...|. +...++| +++++++|.+. .++++||
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~SG 114 (406)
T PRK13393 45 REVTVWCSNDYLGMGQHPAVLAAMHEALD-TCGAGAGGTRNISGTNHYHVLLE----AELADLHGKEA-----ALLFTSG 114 (406)
T ss_pred ccEEEeecccccCCCCCHHHHHHHHHHHH-HcCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCc
Confidence 446778899997 8999999988764 565555555554443 3344555 46999999865 4888999
Q ss_pred HHHHHHHHhhhcc--CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC---C
Q 015609 227 TSANFAVYTGLLL--PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY---R 301 (403)
Q Consensus 227 T~An~aal~all~--pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~---~ 301 (403)
++||.+++.++.. +||.|+.....|+..+. .+...+. ++..++ ..|++.++++++.. +
T Consensus 115 ~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~---------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~ 177 (406)
T PRK13393 115 YVSNWAALSTLGSRLPGCVILSDELNHASMIE---------GIRHSRA--EKRIFR------HNDPADLERKLSDLDPHR 177 (406)
T ss_pred HHHHHHHHHHhhcCCCCCEEEEccchhHHHHH---------HHHHcCC--eEEEeC------CCCHHHHHHHHHhccCCC
Confidence 9999999998765 78888887777654331 1223332 233333 25788888877642 4
Q ss_pred CcEEEEeCC--CCCccccHHHHHHHHHHcCCEEEEecccccccccc-c--ccc-CCC-CcccEEEEcCcCCCcCCceEEE
Q 015609 302 PKILICGGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA-K--ELA-SPF-DYCDIVTSTTHKSLRGPRGGII 374 (403)
Q Consensus 302 pklViv~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~-g--~~~-~p~-~~aDivt~StHKtL~GP~GG~I 374 (403)
+++|+++.. ..|.+.|+++|.++|+++|+++++|++|+.|+... | ... ..+ +..|+++.|+.|+++ ..||++
T Consensus 178 ~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g-~~GG~~ 256 (406)
T PRK13393 178 PKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFG-VMGGYI 256 (406)
T ss_pred CEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhc-ccCcee
Confidence 577777543 45788999999999999999999999999887532 2 111 011 126899999999975 467888
Q ss_pred EEeCC
Q 015609 375 FFRRG 379 (403)
Q Consensus 375 ~~~~~ 379 (403)
+++++
T Consensus 257 ~~~~~ 261 (406)
T PRK13393 257 TGSAA 261 (406)
T ss_pred eCCHH
Confidence 76543
No 118
>PLN02263 serine decarboxylase
Probab=99.63 E-value=3.1e-14 Score=148.15 Aligned_cols=172 Identities=17% Similarity=0.191 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCC-CCCcceEEeCChHHHHHHHHhhhcc--CCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 194 YIDQIENLCFERALKAFDLDS-DNWGVNVQPYSCTSANFAVYTGLLL--PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 194 ~~~~lE~~arerla~lfg~~~-~~~~v~V~~~SGT~An~aal~all~--pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
...++|+...++++++||.++ ..|| +++++||+||+.++.+.-+ +...|+++... |.++. |.+.+.
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G--~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~a------H~Sv~---KAa~ll 198 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWG--YITNCGTEGNLHGILVGREVFPDGILYASRES------HYSVF---KAARMY 198 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeE--EEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCc------cHHHH---HHHHhc
Confidence 356899999999999999976 4465 5567899999998876532 33356666544 33322 555666
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCC--CcEEEE--eCCCCCccccHHHHHHHHHHcCC-----EEEEecccccc
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYR--PKILIC--GGSSYPREWDYGRFRQIADKCGA-----VLMCDMAHISG 341 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~--pklViv--~~s~~g~~~Di~~I~~Iake~Ga-----~LivDaAh~~G 341 (403)
|.. ++.++++ +++.+|+++|+++|.+.+ |-+|++ +.+.+|.+-|+++|++||+++|+ +||||+|.+..
T Consensus 199 gi~--~~~Vp~d-~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~ 275 (470)
T PLN02263 199 RME--CVKVDTL-VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGL 275 (470)
T ss_pred CCc--ceEeccC-CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhh
Confidence 654 4555566 478999999999987654 555543 45567889999999999999997 99999996554
Q ss_pred ccccccccCCCCc---ccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 342 LIAAKELASPFDY---CDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 342 lia~g~~~~p~~~---aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.++.-....+++. +|.++.++|||++.|.+ |++++++.
T Consensus 276 ~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~ 317 (470)
T PLN02263 276 MMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRME 317 (470)
T ss_pred HhhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehh
Confidence 4432111122332 99999999999999987 88888864
No 119
>PLN02509 cystathionine beta-lyase
Probab=99.63 E-value=7.1e-15 Score=153.45 Aligned_cols=160 Identities=19% Similarity=0.215 Sum_probs=118.3
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
|++..+.+|+ ++++++|.+. .+.++||++|+.+++ .++++||+|++....|++..... . ..+...
T Consensus 131 gnpt~~aLE~----~lA~leg~e~-----ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll--~---~~l~~~ 195 (464)
T PLN02509 131 GNPTRDALES----LLAKLDKADR-----AFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLL--S---QVVPRS 195 (464)
T ss_pred CCHHHHHHHH----HHHHHhCCCE-----EEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHH--H---HHHHHC
Confidence 7787888876 4888998776 477889998876555 57899999999988876642100 0 001122
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccc
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL 348 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~ 348 (403)
| .++..++ ..|++++++++.+ ++|+|+++..+ .|.+.|+++|+++|+++|+++++|+||+.|...
T Consensus 196 G--~~v~~vd------~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~---- 262 (464)
T PLN02509 196 G--VVVKRVN------TTNLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLS---- 262 (464)
T ss_pred C--eEEEEeC------CCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccC----
Confidence 3 3444433 2478999998864 67888887554 467899999999999999999999999887642
Q ss_pred cCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 349 ASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 349 ~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.|+. ++|++++|++|+|.||. ||+++++++
T Consensus 263 -~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~ 296 (464)
T PLN02509 263 -RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 296 (464)
T ss_pred -ChhhcCCcEEEecCcccccCCCccceeEEEeccH
Confidence 3444 49999999999999875 688887654
No 120
>PLN02242 methionine gamma-lyase
Probab=99.62 E-value=5.3e-15 Score=152.62 Aligned_cols=162 Identities=16% Similarity=0.121 Sum_probs=118.7
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
+++...++|+ ++++++|.+. .+.+.||++|+.+++.+++++||+|++....|+++.. .+.. ......
T Consensus 74 ~~Pt~~~LE~----~lA~l~g~~~-----~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~--~~~~--~~~~~~ 140 (418)
T PLN02242 74 FNPTVLNLGR----QMAALEGTEA-----AYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHA--LLAH--FLPRKC 140 (418)
T ss_pred CChhHHHHHH----HHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHH--HHHH--hhhhcc
Confidence 6788888886 4899999987 3678899999999999999999999998877665421 0000 000112
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccc
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL 348 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~ 348 (403)
| .++..++ ..|++++++++++.++|+|++...+ +|.+.|+++|+++|+++|+++++|.+|..+..
T Consensus 141 G--~~~~~~d------~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~----- 207 (418)
T PLN02242 141 N--ITTTFVD------ITDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVL----- 207 (418)
T ss_pred C--ceEEEcC------CCCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCC-----
Confidence 2 2333332 2489999999875458998887544 45688999999999999999999999864322
Q ss_pred cCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 349 ASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 349 ~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.+.. .+|++++|++|++.|+. ||+++.+++
T Consensus 208 -~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~ 241 (418)
T PLN02242 208 -SPARLGADVVVHSISKFISGGADIIAGAVCGPAE 241 (418)
T ss_pred -CHHHcCCcEEEEeCccccCCCCCceEEEEEcCHH
Confidence 2222 38999999999997763 788887654
No 121
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.62 E-value=2.3e-14 Score=141.78 Aligned_cols=198 Identities=21% Similarity=0.236 Sum_probs=133.8
Q ss_pred ccceeccCcc----CcHHHHHHHHHHhhhcCCCCCCCCccccch-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015609 153 GIELIASENF----VCRAVMEALGSHLTNKYSEGYPGARYYTGN-QYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 153 ~l~LiaSen~----~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~-~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
-|.|..+ ++ .+|.|++++...+. +|..++.+.++..|. +...+ .++.++++++.+. .|++++|+
T Consensus 18 ~id~~~~-~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~~~~~-----~i~~~~G~ 86 (360)
T TIGR00858 18 LLNFSSN-DYLGLASHPEVIQAAQQGAE-QYGAGSTASRLVSGNSPLHEE----LEEELAEWKGTEA-----ALLFSSGY 86 (360)
T ss_pred EEecccC-CcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCcHHHHH----HHHHHHHHhCCCC-----EEEECchH
Confidence 3556554 43 35899999987764 454444444443443 32333 4567889998654 57888999
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC---CCcE
Q 015609 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY---RPKI 304 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~---~pkl 304 (403)
+++..++.+++++||+|++....|.... ..+...+. +++.++ .+|++.+++++++. ++++
T Consensus 87 ~~~~~~l~~~~~~gd~v~~~~~~~~~~~---------~~~~~~g~--~~~~~~------~~d~~~l~~~~~~~~~~~~~~ 149 (360)
T TIGR00858 87 LANVGVISALVGKGDLILSDALNHASLI---------DGCRLSGA--RVRRYR------HNDVEHLERLLEKNRGERRKL 149 (360)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHH---------HHHHhcCC--ceEEec------CCCHHHHHHHHHHcccCCCeE
Confidence 9998888888999999999876654332 11233332 233322 36899999998753 3577
Q ss_pred EEEeCC--CCCccccHHHHHHHHHHcCCEEEEeccccccccccc-c--cc-CCC--CcccEEEEcCcCCCcCCceEEEEE
Q 015609 305 LICGGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAK-E--LA-SPF--DYCDIVTSTTHKSLRGPRGGIIFF 376 (403)
Q Consensus 305 Viv~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g-~--~~-~p~--~~aDivt~StHKtL~GP~GG~I~~ 376 (403)
|+++.. ..|...|+++|.++|+++|+++++|++|+.|..... . .. ..+ +..|+++.|++|+| |+.||+++.
T Consensus 150 v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~gG~~~~ 228 (360)
T TIGR00858 150 IVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKAL-GSYGAYVAG 228 (360)
T ss_pred EEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhh-hccCcEEEc
Confidence 776643 245678999999999999999999999988765321 0 10 111 13789999999987 567888887
Q ss_pred eCC
Q 015609 377 RRG 379 (403)
Q Consensus 377 ~~~ 379 (403)
+++
T Consensus 229 ~~~ 231 (360)
T TIGR00858 229 SQA 231 (360)
T ss_pred CHH
Confidence 653
No 122
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.62 E-value=1.3e-14 Score=147.62 Aligned_cols=166 Identities=21% Similarity=0.183 Sum_probs=121.0
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCC
Q 015609 183 YPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTP 262 (403)
Q Consensus 183 ~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~ 262 (403)
+.++|+ +++....+|+ ++++++|++. .+.+.||+.|+.+++ ++++|||+|++....|++......
T Consensus 42 ~~y~r~--~~p~~~~Le~----~lA~l~g~~~-----~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~--- 106 (377)
T PRK07671 42 YEYSRT--GNPTRAALEE----LIAVLEGGHA-----GFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMT--- 106 (377)
T ss_pred CCcCCC--CChHHHHHHH----HHHHHhCCCc-----eEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHH---
Confidence 444454 6677777776 4899999876 377889998887765 578999999999988765431100
Q ss_pred ccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEeccccc
Q 015609 263 GGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHIS 340 (403)
Q Consensus 263 ~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~~ 340 (403)
+.+.. .+.++..++ ..|++++++++++ ++|+|+++.+++ +...|+++|.++|+++|+++++|+++..
T Consensus 107 --~~~~~--~G~~v~~v~------~~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~ 175 (377)
T PRK07671 107 --KVLNR--FGIEHTFVD------TSNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMT 175 (377)
T ss_pred --HHHhc--CCeEEEEEC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCc
Confidence 01111 224445443 2489999999874 689988875544 5688999999999999999999999876
Q ss_pred cccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 341 GLIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 341 Glia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
+.. ..|+. ++|++++|++|+|.||. ||+++++++
T Consensus 176 ~~~-----~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~ 213 (377)
T PRK07671 176 PYW-----QSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSP 213 (377)
T ss_pred ccc-----CChhhhCCeEEEecCcccccCCccceeEEEEeCcH
Confidence 532 23444 48999999999999885 588877654
No 123
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.61 E-value=1.2e-14 Score=141.65 Aligned_cols=195 Identities=22% Similarity=0.183 Sum_probs=144.2
Q ss_pred cceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015609 154 IELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 154 l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
..|.|++.-++++|++||..... |+.. +..-+|.+..++-++..|.+.++. .-++.+||+.++.++
T Consensus 19 ~L~gPGPsnl~~~V~~A~~~~~l-----gh~s-------Pe~~qIm~~v~egikyVFkT~n~~--tf~isgsGh~g~E~a 84 (385)
T KOG2862|consen 19 TLLGPGPSNLSGRVQEAMSRPSL-----GHMS-------PEFVQIMDEVLEGIKYVFKTANAQ--TFVISGSGHSGWEAA 84 (385)
T ss_pred eeecCCCcCCCHHHHHhhcCCcc-----ccCC-------HHHHHHHHHHHHHHHHHhccCCCc--eEEEecCCcchHHHH
Confidence 47899999999999999975432 3211 223345555678899999988753 346677899999999
Q ss_pred HhhhccCCCeEEecCCCCCccccccccCCccchhhhcc-cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe--CC
Q 015609 234 YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAAS-IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG--GS 310 (403)
Q Consensus 234 l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g-~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~--~s 310 (403)
+..++.|||+|++... |.+++. .+.... .++++..+..++ ++.+.++++++.+.+++|++|.+. .+
T Consensus 85 l~N~lePgd~vLv~~~---G~wg~r-------a~D~~~r~ga~V~~v~~~~-G~~~~le~i~~~lsqh~p~~vfv~hgds 153 (385)
T KOG2862|consen 85 LVNLLEPGDNVLVVST---GTWGQR-------AADCARRYGAEVDVVEADI-GQAVPLEEITEKLSQHKPKAVFVTHGDS 153 (385)
T ss_pred HHhhcCCCCeEEEEEe---chHHHH-------HHHHHHhhCceeeEEecCc-ccCccHHHHHHHHHhcCCceEEEEecCc
Confidence 9999999999998763 333332 222221 124444444443 678999999999999999988654 56
Q ss_pred CCCcccc-HHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEEEEeC
Q 015609 311 SYPREWD-YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GIIFFRR 378 (403)
Q Consensus 311 ~~g~~~D-i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I~~~~ 378 (403)
++|..+| ++.+.++|++++++|+||..-++|... -.++ .+|+..+.++|.|.+|.| +.|...+
T Consensus 154 STgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~-----F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ 220 (385)
T KOG2862|consen 154 STGVLQDLLAISGELCHKHEALLLVDTVASLGGTE-----FEMDEWGVDVAYTGSQKALGAPAGLSIISFSD 220 (385)
T ss_pred cccccchHHHHHHHHhhcCCeEEEEechhhcCCcc-----ceehhhcccEEEecchhhcCCCCCcceeecCH
Confidence 8899999 677789999999999999988877532 1223 399999999999999999 6555443
No 124
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.60 E-value=1.7e-14 Score=147.42 Aligned_cols=198 Identities=21% Similarity=0.240 Sum_probs=135.3
Q ss_pred cceeccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccchH-HHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHH
Q 015609 154 IELIASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTGNQ-YIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTS 228 (403)
Q Consensus 154 l~LiaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~-~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~ 228 (403)
..+++|++|+ +|.|++++...+ .+|..+..++|.+.|.. ...++| +++++++|.+. .|+++||++
T Consensus 48 ~~~~~sn~yl~l~~~p~v~~a~~~~~-~~~~~~~~~s~~~~~~~~~~~~Le----~~la~~~g~~~-----~i~~~sG~~ 117 (410)
T PRK13392 48 VTIWCSNDYLGMGQHPDVIGAMVDAL-DRYGAGAGGTRNISGTSHPHVLLE----RELADLHGKES-----ALLFTSGYV 117 (410)
T ss_pred EEEEECCCccCCCCCHHHHHHHHHHH-HHcCCCCchhhhcccChHHHHHHH----HHHHHHhCCCC-----EEEECcHHH
Confidence 5567889997 889999998766 45655555566555542 344555 46999999764 588899999
Q ss_pred HHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc---CCCc
Q 015609 229 ANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD---YRPK 303 (403)
Q Consensus 229 An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~---~~pk 303 (403)
||..++.++. .+||.|++....|++.. ..+...|. ++..+.. .|++.+++.++. .+++
T Consensus 118 a~~~~i~~l~~~~~g~~vi~~~~~h~s~~---------~~~~~~g~--~~~~~~~------~d~~~l~~~l~~~~~~~t~ 180 (410)
T PRK13392 118 SNDAALSTLGKLLPGCVILSDALNHASMI---------EGIRRSGA--EKQVFRH------NDLADLEEQLASVDPDRPK 180 (410)
T ss_pred HHHHHHHHHhcCCCCCEEEEehhhhHHHH---------HHHHHcCC--eEEEEeC------CCHHHHHHHHHhccCCCCE
Confidence 9999998775 48998888766654322 11233343 2333322 256666666642 3578
Q ss_pred EEEEeCCC--CCccccHHHHHHHHHHcCCEEEEecccccccccc---ccc--cCCCCcccEEEEcCcCCCcCCceEEEEE
Q 015609 304 ILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA---KEL--ASPFDYCDIVTSTTHKSLRGPRGGIIFF 376 (403)
Q Consensus 304 lViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~---g~~--~~p~~~aDivt~StHKtL~GP~GG~I~~ 376 (403)
+|+++..+ .|.+.|+++|.++|+++|+++++|.+|+.|.... +.. ....+.+|+++.|++|+|++ .||+++.
T Consensus 181 ~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~-~GG~~~~ 259 (410)
T PRK13392 181 LIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGC-LGGYIAA 259 (410)
T ss_pred EEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhc-ccchhhc
Confidence 88776443 4678999999999999999999999999887532 111 11122478999999999865 4688876
Q ss_pred eCC
Q 015609 377 RRG 379 (403)
Q Consensus 377 ~~~ 379 (403)
+++
T Consensus 260 ~~~ 262 (410)
T PRK13392 260 SAD 262 (410)
T ss_pred CHH
Confidence 543
No 125
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.60 E-value=1.4e-14 Score=146.65 Aligned_cols=167 Identities=20% Similarity=0.231 Sum_probs=122.8
Q ss_pred CCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccC
Q 015609 182 GYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHT 261 (403)
Q Consensus 182 G~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~ 261 (403)
|+.++|| +++...++|+ ++++++|++. .+.++||++|+.+++ +++++||+|++....|++..... .
T Consensus 43 ~~~y~r~--~~pt~~~le~----~la~l~g~~~-----~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~--~ 108 (366)
T PRK08247 43 GFDYSRT--GNPTRGVLEQ----AIADLEGGDQ-----GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLF--E 108 (366)
T ss_pred CccccCC--CCchHHHHHH----HHHHHhCCCc-----EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHH--H
Confidence 4445555 6677788876 4999999987 377889999998876 67899999999988877643210 0
Q ss_pred CccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCC--ccccHHHHHHHHHHcCCEEEEecccc
Q 015609 262 PGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYP--REWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 262 ~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g--~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
..+...| .++..++. .|++++++++.+ ++|+|+++.++++ ...|+++|.++|+++|+++++|.++.
T Consensus 109 ---~~~~~~G--~~v~~vd~------~d~~~l~~~i~~-~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~ 176 (366)
T PRK08247 109 ---EHWKKWN--VRFVYVNT------ASLKAIEQAITP-NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFY 176 (366)
T ss_pred ---HHhhccC--ceEEEECC------CCHHHHHHhccc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 0111223 34444432 489999999875 6899988765554 56899999999999999999999986
Q ss_pred ccccccccccCCCC-cccEEEEcCcCCCcCC---ceEEEEEeCC
Q 015609 340 SGLIAAKELASPFD-YCDIVTSTTHKSLRGP---RGGIIFFRRG 379 (403)
Q Consensus 340 ~Glia~g~~~~p~~-~aDivt~StHKtL~GP---~GG~I~~~~~ 379 (403)
.+.. ..|+. ++|+++.|++|++.|+ .+|+++.+++
T Consensus 177 ~~~~-----~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~ 215 (366)
T PRK08247 177 TPVL-----QRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQ 215 (366)
T ss_pred cccc-----cCchhcCCcEEEeecceeccCCCceeeeEEecChH
Confidence 6543 23444 4899999999999887 4788887643
No 126
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.60 E-value=1.6e-14 Score=147.23 Aligned_cols=164 Identities=23% Similarity=0.243 Sum_probs=121.4
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCcc
Q 015609 185 GARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGG 264 (403)
Q Consensus 185 gsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~ 264 (403)
++|| +++..+++|+ ++++++|.+. .+.+.||++|+.+++.+++++||+|++....|++.....
T Consensus 45 Y~R~--~~p~~~~le~----~lA~l~g~~~-----v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~------ 107 (382)
T TIGR02080 45 YSRS--GNPTRDLLQQ----ALAELEGGAG-----AVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLL------ 107 (382)
T ss_pred ccCC--CCchHHHHHH----HHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHH------
Confidence 3444 5677777775 4889999654 366778999999999999999999999998877643211
Q ss_pred chhhhccc-ceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEecccccc
Q 015609 265 KKVSAASI-FFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 265 ~~v~~~g~-~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
..+.+. .+++..+ + ..|++++++++++ ++|+|+++..++ |...|+++|.++|+++|+++++|++|+.+
T Consensus 108 --~~~~~~~~~~v~~~--d----~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~ 178 (382)
T TIGR02080 108 --NALAKKGCFRVLFV--D----QGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSP 178 (382)
T ss_pred --HHHHhhcCeEEEEE--C----CCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCccc
Confidence 011121 1233322 2 2489999999874 689988875554 67899999999999999999999999877
Q ss_pred ccccccccCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 342 LIAAKELASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 342 lia~g~~~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
... .|+. ++|+++.|++|++.|+. +|++++++.
T Consensus 179 ~~~-----~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~ 215 (382)
T TIGR02080 179 ALQ-----NPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDP 215 (382)
T ss_pred ccC-----CchhhCCCEEEeecceeccCCCCceeEEEEeCCH
Confidence 532 3444 48999999999998875 688877654
No 127
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.60 E-value=1.4e-14 Score=148.54 Aligned_cols=160 Identities=18% Similarity=0.135 Sum_probs=119.6
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
|++..+.||+ +++.+.+.+. .+.++||++|+.+++.+++++||+|+++...|++...-. . ..+...
T Consensus 62 gnPt~~~Le~----~la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~--~---~~l~~~ 127 (395)
T PRK05967 62 GTPTTDALCK----AIDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFC--D---TMLKRL 127 (395)
T ss_pred CChHHHHHHH----HHHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHH--H---HHHHhc
Confidence 7888888876 4778887765 478889999999999999999999999988877653100 0 011222
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEeccccccccccccc
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL 348 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~ 348 (403)
| +++..++.+ +.+.+++++++ ++|+|+++.+++ +...|+++|+++|+++|+++++|++++.+. .
T Consensus 128 G--i~v~~vd~~------~~e~l~~al~~-~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~-----~ 193 (395)
T PRK05967 128 G--VEVEYYDPE------IGAGIAKLMRP-NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPL-----Y 193 (395)
T ss_pred C--eEEEEeCCC------CHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCce-----e
Confidence 3 344444321 35789998875 689999885544 568899999999999999999999976653 3
Q ss_pred cCCCCc-ccEEEEcCcCCCcCCc---eEEEEEeC
Q 015609 349 ASPFDY-CDIVTSTTHKSLRGPR---GGIIFFRR 378 (403)
Q Consensus 349 ~~p~~~-aDivt~StHKtL~GP~---GG~I~~~~ 378 (403)
..|+++ +|+++.|+.|+++|.. +|+++.++
T Consensus 194 ~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~ 227 (395)
T PRK05967 194 FRPLDFGVDISIHAATKYPSGHSDILLGTVSANE 227 (395)
T ss_pred cChhHcCCCEEEEecccccCCCCCeeEEEEEcCH
Confidence 467774 9999999999998865 57666554
No 128
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.60 E-value=1e-14 Score=150.81 Aligned_cols=173 Identities=14% Similarity=0.176 Sum_probs=116.5
Q ss_pred cccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccch-
Q 015609 188 YYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKK- 266 (403)
Q Consensus 188 ~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~- 266 (403)
.|.|.+...++|+. ++++||.++ .|.++|||.|+++++...++|||.| +... |+... +.
T Consensus 73 ~Yagd~s~~~LE~~----vAe~lG~e~-----aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~---~f~Tt------~ah 132 (460)
T PRK13237 73 AYAGSRNFYHLEET----VQEYYGFKH-----VVPTHQGRGAENLLSRIAIKPGQYV--PGNM---YFTTT------RYH 132 (460)
T ss_pred hhcCCCcHHHHHHH----HHHHHCCCe-----EEEeCCHHHHHHHHHHhCCCCcCEE--CCcc---chHhh------HHH
Confidence 34566667788864 889999987 3777899999998766668999976 3322 22110 11
Q ss_pred hhhcccc-eEEe------eeecCCCCCCCCHHHHHHHhccCCC---cEEE--EeCCCC-Cccc---cHHHHHHHHHHcCC
Q 015609 267 VSAASIF-FESF------PYKVNPQTGYIDYEKLEEKAMDYRP---KILI--CGGSSY-PREW---DYGRFRQIADKCGA 330 (403)
Q Consensus 267 v~~~g~~-~~vv------~~~vd~~~g~ID~d~Le~~i~~~~p---klVi--v~~s~~-g~~~---Di~~I~~Iake~Ga 330 (403)
+...|.. +++. +-..++.++.+|+++|+++|++..+ .+|. +..+.+ |... ++++|.++|+++|+
T Consensus 133 I~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl 212 (460)
T PRK13237 133 QELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGI 212 (460)
T ss_pred HHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCC
Confidence 2223321 1111 0012355789999999999986432 2332 223334 4443 78999999999999
Q ss_pred EEEEecccccc---ccc---cccccCC--------CCcccEEEEcCcCCCcCCceEEEEEeCCC
Q 015609 331 VLMCDMAHISG---LIA---AKELASP--------FDYCDIVTSTTHKSLRGPRGGIIFFRRGK 380 (403)
Q Consensus 331 ~LivDaAh~~G---lia---~g~~~~p--------~~~aDivt~StHKtL~GP~GG~I~~~~~~ 380 (403)
+||.|+||++| +|- .+....+ +.++|.+++|+||.+.+|.||+|++++++
T Consensus 213 ~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~e 276 (460)
T PRK13237 213 KVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDEE 276 (460)
T ss_pred EEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCHH
Confidence 99999999999 331 1222222 23699999999999999999999999873
No 129
>PLN02590 probable tyrosine decarboxylase
Probab=99.60 E-value=4.6e-14 Score=149.60 Aligned_cols=180 Identities=18% Similarity=0.114 Sum_probs=125.3
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCC----cceEEeCChHHHHHHHHhhhcc----C------CC-eEEecCCCCCccc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNW----GVNVQPYSCTSANFAVYTGLLL----P------GD-RIMGLDSPSGGHL 255 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~----~v~V~~~SGT~An~aal~all~----p------GD-~VL~~~~ehgghl 255 (403)
-.+...++|+.+.++++++||.+...| +..++.++||+||+.++.+.-. . .. .|+++...
T Consensus 164 ~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~a----- 238 (539)
T PLN02590 164 TSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQT----- 238 (539)
T ss_pred cCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCc-----
Confidence 345667899999999999999986422 2245667899999888765411 0 11 23334432
Q ss_pred cccccCCccchhhhcccce-EEeeeecCC-CCCCCCHHHHHHHhccC-----CCcEEEE--eCCCCCccccHHHHHHHHH
Q 015609 256 SHGYHTPGGKKVSAASIFF-ESFPYKVNP-QTGYIDYEKLEEKAMDY-----RPKILIC--GGSSYPREWDYGRFRQIAD 326 (403)
Q Consensus 256 sh~~~~~~~~~v~~~g~~~-~vv~~~vd~-~~g~ID~d~Le~~i~~~-----~pklViv--~~s~~g~~~Di~~I~~Iak 326 (403)
|.++. |.+.+.|.+- .++.+++|. +++.+|+++|+++|.+. .|-+|+. +.+++|.+-|+++|++||+
T Consensus 239 -H~Sv~---KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~ 314 (539)
T PLN02590 239 -HSSFR---KACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAK 314 (539)
T ss_pred -hHHHH---HHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHH
Confidence 33322 4556666542 345555653 25789999999999653 2555543 4556788999999999999
Q ss_pred HcCCEEEEecccccccccccccc---CCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 327 KCGAVLMCDMAHISGLIAAKELA---SPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 327 e~Ga~LivDaAh~~Glia~g~~~---~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
++|++||||+|.+.......... ..++.||.++..+||||..|.+ |++++++.
T Consensus 315 ~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~ 371 (539)
T PLN02590 315 KYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDR 371 (539)
T ss_pred HhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCH
Confidence 99999999999776654443222 2234599999999999999986 88888874
No 130
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.60 E-value=6.8e-14 Score=141.41 Aligned_cols=165 Identities=16% Similarity=0.135 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCcceEEeCChH-HHHHHHHhhhccC--CCeEEecCCCCCccccccccCCccchhhhcc--c
Q 015609 198 IENLCFERALKAFDLDSDNWGVNVQPYSCT-SANFAVYTGLLLP--GDRIMGLDSPSGGHLSHGYHTPGGKKVSAAS--I 272 (403)
Q Consensus 198 lE~~arerla~lfg~~~~~~~v~V~~~SGT-~An~aal~all~p--GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g--~ 272 (403)
+.+..++++++++|++.+. + +++.+|+ +++.+++.+++.+ ||+|++....|+++.. .+...+ .
T Consensus 65 ~~~~~~~~la~~~g~~~~~--v-~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~---------~~~~~~~~~ 132 (398)
T cd00613 65 ALFELQTMLCELTGMDVAN--A-SLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPA---------VARTRGEPL 132 (398)
T ss_pred HHHHHHHHHHHHHCCCccc--e-eccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHH---------HHHHhcccC
Confidence 3344677899999987532 3 3344455 4555556666676 9999999888766532 122222 1
Q ss_pred ceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC-CCCCccccH-HHHHHHHHHcCCEEEEeccccccccccccccC
Q 015609 273 FFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG-SSYPREWDY-GRFRQIADKCGAVLMCDMAHISGLIAAKELAS 350 (403)
Q Consensus 273 ~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~-s~~g~~~Di-~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~ 350 (403)
..+++.+++++ .+.+|++++++++.+ ++++|++.. +..|.+.|+ ++|+++|+++|+++++|++|+.|..... +.
T Consensus 133 g~~~~~v~~~~-~~~~d~~~l~~~i~~-~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~--~~ 208 (398)
T cd00613 133 GIEVVEVPSDE-GGTVDLEALKEEVSE-EVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKP--PG 208 (398)
T ss_pred CcEEEEeccCC-CCCcCHHHHHHhcCC-CeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCCC--hH
Confidence 13455566653 467999999998864 578777654 345677785 9999999999999999999987653211 11
Q ss_pred CCCcccEEEEcCcCCC-----cCCceEEEEEeCC
Q 015609 351 PFDYCDIVTSTTHKSL-----RGPRGGIIFFRRG 379 (403)
Q Consensus 351 p~~~aDivt~StHKtL-----~GP~GG~I~~~~~ 379 (403)
.+ .+|++++++||++ +||.+|+++.++.
T Consensus 209 ~~-~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~ 241 (398)
T cd00613 209 EY-GADIVVGNLQKTGVPHGGGGPGAGFFAVKKE 241 (398)
T ss_pred Hc-CCCEEEeeccccCCCCCCCCCceeEEEEhhh
Confidence 11 4899999999997 1356688887654
No 131
>PLN02721 threonine aldolase
Probab=99.59 E-value=3.3e-14 Score=140.91 Aligned_cols=191 Identities=17% Similarity=0.111 Sum_probs=124.3
Q ss_pred cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc-C
Q 015609 162 FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL-P 240 (403)
Q Consensus 162 ~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~-p 240 (403)
+.++.+++++... . ......|+ .+...++| +.+++++|.+. .+++++||+++.+++.++++ +
T Consensus 17 ~~~~~~~~a~~~~---~---~~~~~~~~--~~~~~~l~----~~la~~~~~~~-----~~~~~~Gs~a~~~~l~~~~~~~ 79 (353)
T PLN02721 17 KPTDAMRAAMANA---E---VDDDVLGY--DPTALRLE----EEMAKIFGKEA-----ALFVPSGTMGNLISVLVHCDVR 79 (353)
T ss_pred CCCHHHHHHHHhc---c---CCCcccCC--CHHHHHHH----HHHHHHhCCce-----eEEecCccHHHHHHHHHHccCC
Confidence 3577888887532 0 01112222 22244444 46999999875 36677899999988888887 9
Q ss_pred CCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc------CCCcEEEEeC-CC--
Q 015609 241 GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD------YRPKILICGG-SS-- 311 (403)
Q Consensus 241 GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~------~~pklViv~~-s~-- 311 (403)
||+|++....|.+....+ ......| .+++.++.++ ++.+|++++++++++ .++++|++.. ++
T Consensus 80 gd~Vl~~~~~~~~~~~~~------~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np 150 (353)
T PLN02721 80 GSEVILGDNSHIHLYENG------GISTLGG--VHPRTVKNNE-DGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANC 150 (353)
T ss_pred CCeEEEcCccceehhccc------chhhhcC--ceeEecCCCc-CCCcCHHHHHHHHHhccCCCCCcceEEEEecccccc
Confidence 999999886642211000 0122233 4555566553 577999999999974 2678887754 33
Q ss_pred CCcccc---HHHHHHHHHHcCCEEEEeccccccccc-cccccCC-CCcccEEEEcCcCCCcCCceEEEEEeC
Q 015609 312 YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIA-AKELASP-FDYCDIVTSTTHKSLRGPRGGIIFFRR 378 (403)
Q Consensus 312 ~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia-~g~~~~p-~~~aDivt~StHKtL~GP~GG~I~~~~ 378 (403)
.|...| +++|.++|+++|+++++|++|..+... .+..+.. ..++|.++.++||+|++|.|++++.++
T Consensus 151 ~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~ 222 (353)
T PLN02721 151 GGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSK 222 (353)
T ss_pred CCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCH
Confidence 345555 789999999999999999999766421 1211111 125899999999999888776565544
No 132
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.59 E-value=7.9e-14 Score=139.62 Aligned_cols=202 Identities=19% Similarity=0.197 Sum_probs=134.0
Q ss_pred hcccceeccCc--c-CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015609 151 FKGIELIASEN--F-VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 151 ~~~l~LiaSen--~-~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
++-|.|..+++ + .+|.|++++...+. +|..+++..++..|... .. ...+++++++++.+. .+++++|+
T Consensus 39 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~--~~-~~l~~~la~~~~~~~-----~i~~~~g~ 109 (385)
T PRK05958 39 RRMLNFASNDYLGLARHPRLIAAAQQAAR-RYGAGSGGSRLVTGNSP--AH-EALEEELAEWFGAER-----ALLFSSGY 109 (385)
T ss_pred ceEEEeeCCCcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCcH--HH-HHHHHHHHHHhCCCc-----EEEECcHH
Confidence 44577766654 2 46899999988774 45434444444333321 12 224567899999643 57788899
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC--CCcEE
Q 015609 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY--RPKIL 305 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~--~pklV 305 (403)
+++..++.+++++||+|++....|++... .....+. .++.++ ..|++.++++++.. +++++
T Consensus 110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~---------~~~~~g~--~~~~~~------~~d~~~l~~~i~~~~~~~~lv 172 (385)
T PRK05958 110 AANLAVLTALAGKGDLIVSDKLNHASLID---------GARLSRA--RVRRYP------HNDVDALEALLAKWRAGRALI 172 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEeCccCHHHHH---------HHHhcCC--ceEEeC------CCCHHHHHHHHHhccCCCeEE
Confidence 99988888889999999998877654431 1233333 233332 25899999998753 24556
Q ss_pred EEeCC--CCCccccHHHHHHHHHHcCCEEEEecccccccccc-cc--cc-CCCC-c-ccEEEEcCcCCCcCCceEEEEEe
Q 015609 306 ICGGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA-KE--LA-SPFD-Y-CDIVTSTTHKSLRGPRGGIIFFR 377 (403)
Q Consensus 306 iv~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~-g~--~~-~p~~-~-aDivt~StHKtL~GP~GG~I~~~ 377 (403)
+++.. ..|...++++|.++|+++|+++++|++|+.|.... +. .. ..++ . .++++.|+||+| |+.||+++.+
T Consensus 173 i~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Gg~~~~~ 251 (385)
T PRK05958 173 VTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSGAAVLGS 251 (385)
T ss_pred EEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCCcEEEcC
Confidence 66533 34667899999999999999999999998876531 11 11 0122 2 347789999998 6678888776
Q ss_pred CC
Q 015609 378 RG 379 (403)
Q Consensus 378 ~~ 379 (403)
++
T Consensus 252 ~~ 253 (385)
T PRK05958 252 ET 253 (385)
T ss_pred HH
Confidence 53
No 133
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.59 E-value=5.5e-15 Score=151.71 Aligned_cols=164 Identities=21% Similarity=0.222 Sum_probs=110.9
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCCh-HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeee
Q 015609 201 LCFERALKAFDLDSDNWGVNVQPYSC-TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPY 279 (403)
Q Consensus 201 ~arerla~lfg~~~~~~~v~V~~~SG-T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~ 279 (403)
+|++.+|++||++.. .+.++| |.+|.+++.++++|||+|++.+..|.+.+ | .+.+.|.. .+++
T Consensus 70 eAe~~aA~~fGAd~t-----~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~-~--------alil~ga~--Pvyi 133 (417)
T PF01276_consen 70 EAEELAARAFGADKT-----FFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVY-N--------ALILSGAI--PVYI 133 (417)
T ss_dssp HHHHHHHHHHTESEE-----EEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHH-H--------HHHHHTEE--EEEE
T ss_pred HHHHHHHHhcCCCeE-----EEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHH-H--------HHHHcCCe--EEEe
Confidence 366779999999983 444555 56999999999999999999997654433 1 24445543 3333
Q ss_pred ec-CCCC---CCCCH-----HHHHHHhccCCC----cEEEE-eCCCCCccccHHHHHHHHHHcCCEEEEecccccccccc
Q 015609 280 KV-NPQT---GYIDY-----EKLEEKAMDYRP----KILIC-GGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA 345 (403)
Q Consensus 280 ~v-d~~~---g~ID~-----d~Le~~i~~~~p----klViv-~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~ 345 (403)
.. +.+. +.|++ +.|+++++++.. ++|++ .++.+|...|+++|.++|+++|++|+||.||++.+...
T Consensus 134 ~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~ 213 (417)
T PF01276_consen 134 PPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFH 213 (417)
T ss_dssp EEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCS
T ss_pred cCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCC
Confidence 22 2112 23666 999999987532 23544 55567999999999999999999999999999876544
Q ss_pred ccccCCCC-ccc-------EEEEcCcCCCcCCc-eEEEEEeCCC
Q 015609 346 KELASPFD-YCD-------IVTSTTHKSLRGPR-GGIIFFRRGK 380 (403)
Q Consensus 346 g~~~~p~~-~aD-------ivt~StHKtL~GP~-GG~I~~~~~~ 380 (403)
......+. ++| +++.|+||+|.+.. +++|..++..
T Consensus 214 ~lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~ 257 (417)
T PF01276_consen 214 PLPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDR 257 (417)
T ss_dssp GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCC
T ss_pred CCccchhhccCccccccceeeeechhhcccccccceEEEecCCC
Confidence 32223333 488 99999999998875 5777777653
No 134
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.58 E-value=4.3e-14 Score=148.24 Aligned_cols=195 Identities=18% Similarity=0.205 Sum_probs=128.4
Q ss_pred CccCcHHHHHHHHHHhhhcCCCCCCCCc--cccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHh--
Q 015609 160 ENFVCRAVMEALGSHLTNKYSEGYPGAR--YYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYT-- 235 (403)
Q Consensus 160 en~~~p~V~eA~~s~l~~~y~eG~pgsr--~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~-- 235 (403)
.+.++|.+.+++.+.. .+..-+|+.. ...|. -++....++.+++++|++. +.+..++|+.+...++.
T Consensus 79 ~~~~~p~i~~~~~~~~--~~~~~tpYq~e~~sqG~---lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l~~~ 149 (481)
T PRK04366 79 TMKYNPKINEKVARLP--GFAELHPLQPEETVQGA---LELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGLLMI 149 (481)
T ss_pred CCCCCHHHHHHHHhCc--chhcCCCCCChhhhhHH---HHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHHHHH
Confidence 4556888888887541 1111122210 11222 2333446788999999985 46777777665554322
Q ss_pred --hhccCCC----eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015609 236 --GLLLPGD----RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 236 --all~pGD----~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
.++++|| +|+++...|..+.. .+...| ++++.++++ +++.+|+++|++++.+ ++++|++..
T Consensus 150 r~~~~~~Gd~~~~~Vlv~~~~hp~~~~---------~~~~~G--~~vv~v~~~-~~~~~D~e~L~~~i~~-~t~~V~v~~ 216 (481)
T PRK04366 150 RAYHEARGDTKRTEVIVPDSAHGTNPA---------SAAMAG--FKVVEIPSN-EDGLVDLEALKAAVGE-DTAALMLTN 216 (481)
T ss_pred HHHhhccCcCCCCEEEEcCCccHhHHH---------HHHHcC--CEEEEeecC-CCCCcCHHHHHhhccc-CCeEEEEeC
Confidence 3357777 89999877654431 233344 455666665 3578999999999864 577776654
Q ss_pred CC-CCcc-ccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCc------eEEEEEeCC
Q 015609 310 SS-YPRE-WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPR------GGIIFFRRG 379 (403)
Q Consensus 310 s~-~g~~-~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~------GG~I~~~~~ 379 (403)
++ +|.. .|+++|+++|+++|++++||+||.+++++ .. .+-+ ++|++++++||+|++|. +|++++++.
T Consensus 217 Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g--~~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~ 292 (481)
T PRK04366 217 PNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILG--KA-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE 292 (481)
T ss_pred CCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcc--cC-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh
Confidence 43 5655 58999999999999999999999877543 11 2323 49999999999997664 267777654
No 135
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.58 E-value=1.8e-14 Score=145.31 Aligned_cols=191 Identities=15% Similarity=0.107 Sum_probs=125.9
Q ss_pred cCcHHHHHHHHHHhhhcCCCCCCCC----ccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh
Q 015609 162 FVCRAVMEALGSHLTNKYSEGYPGA----RYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL 237 (403)
Q Consensus 162 ~~~p~V~eA~~s~l~~~y~eG~pgs----r~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al 237 (403)
.+|..|++++..++.+.. +.+. ..+...++.+.+++ ++++++++|+++.. |.+.++..|||.|+.+++.++
T Consensus 2 ~~p~~v~~~~~~~~~~~~---~~~~~~~~~~hr~~~f~~~~~~-~~~~l~~l~~~~~~-~~v~~~~gsgT~a~ea~~~nl 76 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFN---GTGMSVMEISHRSKEFEAVANE-AESDLRELLNIPDN-YEVLFLQGGATGQFAAVPLNL 76 (349)
T ss_pred CCCHHHHHHHHHHHhCcc---CCCccccccCCCchHHHHHHHH-HHHHHHHHhCCCCC-ceEEEEcCCchHHHHHHHHhc
Confidence 468899999998876422 2221 22345566666665 79999999997432 223333456999999999999
Q ss_pred ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec-CCCCCCCCHHHHHHHhccCCCcEEEEe--CCCCCc
Q 015609 238 LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV-NPQTGYIDYEKLEEKAMDYRPKILICG--GSSYPR 314 (403)
Q Consensus 238 l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v-d~~~g~ID~d~Le~~i~~~~pklViv~--~s~~g~ 314 (403)
+++||++++... |.++|.+. .-....|. +.++..+- -++...+|+++++. ..++++|.+. .+++|.
T Consensus 77 ~~~~~~~l~i~~---G~fg~r~~----~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~th~ETstGv 145 (349)
T TIGR01364 77 LAEGKVADYIVT---GAWSKKAA----KEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI---SEDAAYVHYCANETIHGV 145 (349)
T ss_pred CCCCCeEEEEEC---CHHHHHHH----HHHHHhCC-cEEEeccccCCCCCCCCHHhcCC---CCCCCEEEEcCCCCcccE
Confidence 999999988763 44444421 11222343 33333210 01234567776652 2357887654 345677
Q ss_pred cccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 315 EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 315 ~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.++ ++++.++++++||++|++|..+. .++..|++++|+||+| ||+| |+++.++.
T Consensus 146 ~~~-----~l~~~~~~l~iVDavss~g~~~i-----d~~~~d~~~~ssqK~l-gP~Glg~l~~s~~ 200 (349)
T TIGR01364 146 EFR-----ELPDVKNAPLVADMSSNILSRPI-----DVSKFGLIYAGAQKNI-GPAGLTVVIVRKD 200 (349)
T ss_pred ecc-----eecccCCCeEEEEccccccCccC-----CHHHccEEEEeccccc-CCCceEEEEECHH
Confidence 655 67777899999999999997642 3334789999999987 6998 77777664
No 136
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.57 E-value=1.4e-14 Score=144.85 Aligned_cols=201 Identities=22% Similarity=0.277 Sum_probs=150.8
Q ss_pred hhcccceeccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccch-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC
Q 015609 150 QFKGIELIASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTGN-QYIDQIENLCFERALKAFDLDSDNWGVNVQPY 224 (403)
Q Consensus 150 q~~~l~LiaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G~-~~~~~lE~~arerla~lfg~~~~~~~v~V~~~ 224 (403)
..+.+....|+.|+ +|.|++||...+ ++|+.|.-|.|...|. .+...||.+ +++|.+.+.+ +.|+
T Consensus 169 t~k~VtVWCSNDYLgms~Hp~V~~A~~~tl-~~hG~GAGGTRNIsG~s~~hv~LE~e----LA~LHqK~aA-----LlFs 238 (570)
T KOG1360|consen 169 TEKKVTVWCSNDYLGMSRHPEVLDAMHDTL-DRHGAGAGGTRNISGHSKHHVRLEAE----LADLHQKEAA-----LLFS 238 (570)
T ss_pred ccCceEEEecCccccccCChHHHHHHHHHH-HHcCCCcCCccccCCCCchhhhHHHH----HHHHhcCcce-----eeee
Confidence 34678899999998 899999999887 5677788888888777 455677764 8999998873 7789
Q ss_pred ChHHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC--
Q 015609 225 SCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY-- 300 (403)
Q Consensus 225 SGT~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~-- 300 (403)
|+.-||.+.+..|. -||-+|...... |.+++ .-++-.+ +...-|+ ..|+++|+++++..
T Consensus 239 SCfVANDstLftLak~lpgcei~SD~gN------HASMI---~GIrns~--v~K~IFr------HND~~hL~~lL~~~~~ 301 (570)
T KOG1360|consen 239 SCFVANDSTLFTLAKKLPGCEIFSDEGN------HASMI---QGIRNSR--VPKHIFR------HNDLDHLEQLLQSSPK 301 (570)
T ss_pred eeeeccchHHHHHHHHCCCcEEeccccc------hHHHH---HHhhhcC--Ccceeec------cCCHHHHHHHHHhCCC
Confidence 99999999998884 589888877655 34332 1122122 1122233 46899999999764
Q ss_pred -CCcEEEEe--CCCCCccccHHHHHHHHHHcCCEEEEecccccccccc---cccc--CCCCcccEEEEcCcCCCcCCceE
Q 015609 301 -RPKILICG--GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA---KELA--SPFDYCDIVTSTTHKSLRGPRGG 372 (403)
Q Consensus 301 -~pklViv~--~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~---g~~~--~p~~~aDivt~StHKtL~GP~GG 372 (403)
.||+|.++ .|..|.+.|+++|+++|++||++.++|..|+.|+... |+-. ..+..+|++++|.-|.| |--||
T Consensus 302 svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVGG 380 (570)
T KOG1360|consen 302 SVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVGG 380 (570)
T ss_pred CCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhc-ccccc
Confidence 47888775 3456889999999999999999999999999999763 2211 22234899999999987 56788
Q ss_pred EEEEeC
Q 015609 373 IIFFRR 378 (403)
Q Consensus 373 ~I~~~~ 378 (403)
+|....
T Consensus 381 YIAat~ 386 (570)
T KOG1360|consen 381 YIAATR 386 (570)
T ss_pred eehhhh
Confidence 887654
No 137
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.57 E-value=1.1e-14 Score=147.40 Aligned_cols=192 Identities=13% Similarity=0.030 Sum_probs=121.2
Q ss_pred ccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe--CChHHHH
Q 015609 153 GIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQP--YSCTSAN 230 (403)
Q Consensus 153 ~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~--~SGT~An 230 (403)
.-.++|+++.++++|+++|..... +... ..+.+.++.+.+++ +|++++++|+++.. | .|++ .|||.|+
T Consensus 4 ~~~f~pGP~~~~~~v~~a~~~~~~-----~~~~-~~hr~~~f~~~~~~-~r~~l~~l~~~~~~-~--~v~f~~gs~T~a~ 73 (361)
T TIGR01366 4 DGRFGSGPSKVRLEQLQALTTTAA-----SLFG-TSHRQAPVKNLVGR-VREGLAELFSLPDG-Y--EVILGNGGATAFW 73 (361)
T ss_pred CCcccCCCcCCCHHHHHHHHhcCc-----cccc-cCcCChHHHHHHHH-HHHHHHHHhCCCCC-c--eEEEECCchhHHH
Confidence 345899999999999999874310 1111 11334667777775 89999999999542 1 3443 4689999
Q ss_pred HHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC-
Q 015609 231 FAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG- 309 (403)
Q Consensus 231 ~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~- 309 (403)
++++.+++.+ +.+++..-+++..+.|.. .......++..+++++ +..++.+ +. .++|+|++.+
T Consensus 74 ~~~~~~l~~~-~~l~i~~G~~~~~~~~~a--------~~~~~~~~~~~~~~~~-~~~~~~~-----~~-~~~~lV~~~h~ 137 (361)
T TIGR01366 74 DAATFGLIEK-KSLHLSFGEFSSKFAKAV--------KLAPWLGEPIIVTADP-GSAPEPQ-----AD-PGVDVIAWAHN 137 (361)
T ss_pred HHHHHhcccc-cccEEecCHHHHHHHHHH--------HhhhccCCceEEecCC-CCCCCCc-----cC-CCCCEEEEccc
Confidence 9999999753 233333334433332221 1110000122333332 3444442 22 3678886653
Q ss_pred -CCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCceE-EEEEeC
Q 015609 310 -SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRGG-IIFFRR 378 (403)
Q Consensus 310 -s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~GG-~I~~~~ 378 (403)
+++|..+|+++| +|++|++++||++|++|..+. +++.+|++++|+||+|++|.|. +++.++
T Consensus 138 et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~i-----dv~~~D~~~~s~~K~lg~~~Gl~~~~~s~ 200 (361)
T TIGR01366 138 ETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPV-----DIAETDVYYFAPQKNFASDGGLWLAIMSP 200 (361)
T ss_pred CCccceecccccc---cccCCCeEEEEcCccccCCCC-----CHHHCCEEEEEchhhcCCCCceEEEEECH
Confidence 457889999887 589999999999999998643 2334899999999998777663 333344
No 138
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.56 E-value=5.9e-14 Score=145.36 Aligned_cols=164 Identities=18% Similarity=0.214 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccce
Q 015609 195 IDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFF 274 (403)
Q Consensus 195 ~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~ 274 (403)
..+||+ .++++||.++ .|.+++|++|+++++.++++|||.|+ +.. |+.+. ...+.+.| .
T Consensus 55 ~~~Lee----aia~~~g~~~-----vv~t~~Gt~Al~la~~al~~pGD~V~-~~~----~f~~~-----~~~i~~~G--a 113 (431)
T cd00617 55 FYDLED----AVQDLFGFKH-----IIPTHQGRGAENILFSILLKPGRTVP-SNM----HFDTT-----RGHIEANG--A 113 (431)
T ss_pred HHHHHH----HHHHHHCCCe-----EEEcCCHHHHHHHHHHHhCCCCCEEc-cCC----cccch-----HHHHHhCC--C
Confidence 445554 5889999986 36677999999999999999999874 321 22110 01233344 3
Q ss_pred EEeeeecCC---------CCCCCCHHHHHHHhccC---CCcEEEEeCCCC---Cccc---cHHHHHHHHHHcCCEEEEec
Q 015609 275 ESFPYKVNP---------QTGYIDYEKLEEKAMDY---RPKILICGGSSY---PREW---DYGRFRQIADKCGAVLMCDM 336 (403)
Q Consensus 275 ~vv~~~vd~---------~~g~ID~d~Le~~i~~~---~pklViv~~s~~---g~~~---Di~~I~~Iake~Ga~LivDa 336 (403)
+.+.+++++ .++.+|+++|++++.+. ++++|+++.+++ |.+. ++++|+++|+++|++|+.|+
T Consensus 114 ~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~Da 193 (431)
T cd00617 114 VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDA 193 (431)
T ss_pred EeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 445555542 24669999999999854 367777654432 5555 46678999999999999999
Q ss_pred cccccccc------cccccCC--------CCcccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 337 AHISGLIA------AKELASP--------FDYCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 337 Ah~~Glia------~g~~~~p--------~~~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
||..+-.. .+....+ +.++|.+++|+||.+.+|.||+|+++++
T Consensus 194 Ar~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~ 250 (431)
T cd00617 194 ARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDD 250 (431)
T ss_pred hhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcH
Confidence 99875211 1211112 1259999999999998999999999885
No 139
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.56 E-value=2e-14 Score=141.74 Aligned_cols=195 Identities=18% Similarity=0.227 Sum_probs=130.9
Q ss_pred ccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh
Q 015609 158 ASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL 237 (403)
Q Consensus 158 aSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al 237 (403)
.|.| .+|+++++|..... |. ..|++.++..++|+ +++++||.+. .+++.|||.||.++++++
T Consensus 3 ~SD~-~~~~m~~a~~~a~~-----gd---~~Yg~D~~~~~l~~----~i~~l~g~e~-----a~f~~sGT~An~~al~~~ 64 (290)
T PF01212_consen 3 RSDT-PTPAMLEAMAAANV-----GD---DAYGEDPTTARLEE----RIAELFGKEA-----ALFVPSGTMANQLALRAH 64 (290)
T ss_dssp S-SS-S-HHEEHHHHHTTS-----B----CCTTSSHHHHHHHH----HHHHHHTSSE-----EEEESSHHHHHHHHHHHH
T ss_pred CccC-CCHHHHHHHHcccc-----CC---cccCCChhHHHHHH----HHHHHcCCCE-----EEEeCCCChHHHHHHHHH
Confidence 3556 88999999954321 22 23566777777776 5899999986 367789999999999999
Q ss_pred ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc-----CCCcEEEEeCC-C
Q 015609 238 LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD-----YRPKILICGGS-S 311 (403)
Q Consensus 238 l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~-----~~pklViv~~s-~ 311 (403)
++|++.|++... +|+. ....+....+.| .++++++.+ +.|.+|+++|++.+.. .+|++|++..+ +
T Consensus 65 ~~~~~~vi~~~~---aHi~---~~E~ga~~~~~G--~~~~~l~~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~ 135 (290)
T PF01212_consen 65 LRPGESVICADT---AHIH---FDETGAIEELSG--AKLIPLPSD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTE 135 (290)
T ss_dssp HHTTEEEEEETT---EHHH---HSSTTHHHHHTT--CEEEEEBEC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBT
T ss_pred HhcCCceecccc---ceee---eeccchhhHhcC--cEEEECCCc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCc
Confidence 999999998764 3432 111111113334 455655543 1389999999999987 34688888755 4
Q ss_pred C--Cccc---cHHHHHHHHHHcCCEEEEeccccccccc-cccccCC-CCcccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 312 Y--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIA-AKELASP-FDYCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 312 ~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia-~g~~~~p-~~~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
+ |.+. .+++|+++||++|++|+.|+|-.+-... .+..... ..++|+++++++|.++.|-|++++.+++
T Consensus 136 ~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~ 210 (290)
T PF01212_consen 136 LAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKE 210 (290)
T ss_dssp TTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESHH
T ss_pred CCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEechH
Confidence 4 6665 4667778899999999999996533221 1111111 1359999999999999999999999876
No 140
>PLN02822 serine palmitoyltransferase
Probab=99.56 E-value=1.3e-13 Score=144.80 Aligned_cols=198 Identities=17% Similarity=0.159 Sum_probs=135.9
Q ss_pred ccceeccCcc----CcHHHHHHHHHHhhhcCCCCCCCCccccchH-HHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015609 153 GIELIASENF----VCRAVMEALGSHLTNKYSEGYPGARYYTGNQ-YIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 153 ~l~LiaSen~----~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~-~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
.|+ +++.+| .+|.+++++...+. +|+.|+.|+|.+.|.. ...++ +++++++++.+. .|++++|.
T Consensus 111 ~id-~~s~~~lgl~~~~~i~ea~~~al~-~~G~g~~g~r~~yg~~~~~~~L----ee~La~~~~~~~-----~i~~s~G~ 179 (481)
T PLN02822 111 VVN-FASANYLGLIGNEKIKESCTSALE-KYGVGSCGPRGFYGTIDVHLDC----ETKIAKFLGTPD-----SILYSYGL 179 (481)
T ss_pred EEE-eECCCcCCCCCCHHHHHHHHHHHH-HhCCCCcccCccccCHHHHHHH----HHHHHHHhCCCC-----EEEECCHH
Confidence 354 456666 38999999988764 5666777777654543 33334 557999999875 47778888
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc--------
Q 015609 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD-------- 299 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~-------- 299 (403)
.++.+++.+++++||.|++....|.... ..+.+.+. ++++++.+ |+++++..+++
T Consensus 180 ~a~~sai~a~~~~gd~Ii~d~~~H~s~~---------~~~~ls~~--~~~~~~~n------d~~~l~~~l~~~~~~~~~~ 242 (481)
T PLN02822 180 STIFSVIPAFCKKGDIIVADEGVHWGIQ---------NGLYLSRS--TIVYFKHN------DMESLRNTLEKLTAENKRK 242 (481)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCccHHHH---------HHHHHcCC--eEEEECCC------CHHHHHHHHHHHhhhhccc
Confidence 8999999999999999997765432221 12333332 45555543 45555554432
Q ss_pred CCC-cEEEEeC--CCCCccccHHHHHHHHHHcCCEEEEecccccccccc-c--ccc-CCC--CcccEEEEcCcCCCcCCc
Q 015609 300 YRP-KILICGG--SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA-K--ELA-SPF--DYCDIVTSTTHKSLRGPR 370 (403)
Q Consensus 300 ~~p-klViv~~--s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~-g--~~~-~p~--~~aDivt~StHKtL~GP~ 370 (403)
.++ ++|+++. ++.|.+.|+++|+++|++||++|++|.+|+.|.+.. | ... ..+ ...|++++|+.|++ |..
T Consensus 243 ~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKal-g~~ 321 (481)
T PLN02822 243 KKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHAL-ATE 321 (481)
T ss_pred CCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhh-hhC
Confidence 123 5777753 356889999999999999999999999999887642 1 111 111 24799999999997 577
Q ss_pred eEEEEEeCC
Q 015609 371 GGIIFFRRG 379 (403)
Q Consensus 371 GG~I~~~~~ 379 (403)
||+++++++
T Consensus 322 GG~i~g~~~ 330 (481)
T PLN02822 322 GGFCTGSAR 330 (481)
T ss_pred CeEEEcCHH
Confidence 899987664
No 141
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.56 E-value=1.5e-13 Score=138.30 Aligned_cols=202 Identities=20% Similarity=0.216 Sum_probs=133.3
Q ss_pred hcccceeccC--cc-CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015609 151 FKGIELIASE--NF-VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 151 ~~~l~LiaSe--n~-~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
++-|+|..+. .+ .+|.+++++...+. ++...+.+.++..|... +-+..++++++++|.+. .++++||+
T Consensus 33 ~~~id~~~~~~~g~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~g~~~---l~~~l~~~l~~~~g~~~-----~i~~~sG~ 103 (385)
T TIGR01825 33 KEVINLSSNNYLGFADHPRLKEAAAQAIQ-QYGVGAGAVRTIAGTLR---LHEELEEKLAKFKKTEA-----ALVFQSGF 103 (385)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHH-HcCCCCCccCcccCCcH---HHHHHHHHHHHHhCCCc-----EEEECcHH
Confidence 3446666432 34 68888888877653 34322223334445422 22234556888999764 47788999
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC---CCcE
Q 015609 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY---RPKI 304 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~---~pkl 304 (403)
+|+.+++.+++++||.|++....|++.+. .+...+. ++..+ ..+|++++++.+++. ++++
T Consensus 104 ~a~~~a~~~~~~~gd~vi~~~~~~~~~~~---------~~~~~g~--~~~~~------~~~d~~~l~~~l~~~~~~~~~~ 166 (385)
T TIGR01825 104 NTNQGVLSALLRKGDIVLSDELNHASIID---------GLRLTKA--TKKIY------KHADMDDLDRVLRENPSYGKKL 166 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHH---------HHHhcCC--ceEEe------CCCCHHHHHHHHHhhccCCCeE
Confidence 99999999999999999988766544321 1222232 22222 248899999887653 4677
Q ss_pred EEEeC--CCCCccccHHHHHHHHHHcCCEEEEecccccccccc-cc--c-cCCCC-cccEEEEcCcCCCcCCceEEEEEe
Q 015609 305 LICGG--SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA-KE--L-ASPFD-YCDIVTSTTHKSLRGPRGGIIFFR 377 (403)
Q Consensus 305 Viv~~--s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~-g~--~-~~p~~-~aDivt~StHKtL~GP~GG~I~~~ 377 (403)
|+++. +..|.+.|+++|.++|+++|+++++|++|..|.... +. . ...+. ..|+++.|++|+| |..||+++.+
T Consensus 167 v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~gG~~~~~ 245 (385)
T TIGR01825 167 IVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAI-GVVGGYAAGH 245 (385)
T ss_pred EEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHh-hcCCCEEecC
Confidence 77764 335678899999999999999999999998775431 10 0 01122 4789999999998 5567888776
Q ss_pred CC
Q 015609 378 RG 379 (403)
Q Consensus 378 ~~ 379 (403)
++
T Consensus 246 ~~ 247 (385)
T TIGR01825 246 KE 247 (385)
T ss_pred HH
Confidence 53
No 142
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.55 E-value=2.7e-13 Score=150.34 Aligned_cols=164 Identities=19% Similarity=0.174 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc--------CCCeEEecCCCCCccccccccCCccchhh
Q 015609 197 QIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL--------PGDRIMGLDSPSGGHLSHGYHTPGGKKVS 268 (403)
Q Consensus 197 ~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~--------pGD~VL~~~~ehgghlsh~~~~~~~~~v~ 268 (403)
+++.+.+.++++++|.+. +.+++.+|+.|+.++++++-. ..++|+++...||.+. ....
T Consensus 530 q~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP---------asa~ 596 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP---------ASAA 596 (939)
T ss_pred HHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH---------HHHH
Confidence 444456778999999996 578899999988876666532 2356888877655432 1223
Q ss_pred hcccceEEeeeecCCCCCCCCHHHHHHHhcc--CCCcEEEEe-CCCCCcccc-HHHHHHHHHHcCCEEEEeccccccccc
Q 015609 269 AASIFFESFPYKVNPQTGYIDYEKLEEKAMD--YRPKILICG-GSSYPREWD-YGRFRQIADKCGAVLMCDMAHISGLIA 344 (403)
Q Consensus 269 ~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~--~~pklViv~-~s~~g~~~D-i~~I~~Iake~Ga~LivDaAh~~Glia 344 (403)
..| ++++.++++ ++|.+|+++|++++++ .++++|++. .+++|...| +++|+++||++|+++++|+||..++..
T Consensus 597 ~~G--~~Vv~V~~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~ 673 (939)
T TIGR00461 597 MAG--MQVVPVNCD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVG 673 (939)
T ss_pred HCC--CEEEEeccC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCC
Confidence 334 566667776 4799999999999975 356777664 556777655 999999999999999999999876543
Q ss_pred cccccCCCC-cccEEEEcCcCCCcCCc-----e-EEEEEeCC
Q 015609 345 AKELASPFD-YCDIVTSTTHKSLRGPR-----G-GIIFFRRG 379 (403)
Q Consensus 345 ~g~~~~p~~-~aDivt~StHKtL~GP~-----G-G~I~~~~~ 379 (403)
. ..|-+ .+|+++++.||+|++|. | |+|.+++.
T Consensus 674 l---~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~ 712 (939)
T TIGR00461 674 L---TSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH 712 (939)
T ss_pred C---CCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh
Confidence 1 23333 49999999999998554 4 88888764
No 143
>PRK06460 hypothetical protein; Provisional
Probab=99.54 E-value=9.1e-14 Score=141.41 Aligned_cols=161 Identities=16% Similarity=0.163 Sum_probs=112.8
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
+++..+++|+ ++++++|++. .+.++||++|+.+++.+++++||+|++....+++.+... . ..+...
T Consensus 43 ~~p~~~~L~~----~lA~l~g~~~-----~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~--~---~~~~~~ 108 (376)
T PRK06460 43 ANPTVLELTK----KIVELENAEM-----GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFF--T---DYLKNW 108 (376)
T ss_pred CCccHHHHHH----HHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHH--H---HHHHhh
Confidence 4455565554 5999999976 467889999999999999999999999876554432110 0 112223
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccc
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL 348 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~ 348 (403)
| .++..++.+ +.+.+++++ +.++|+|+++..+ .|.++|+++|.++|+++|+++++|++|+.+..
T Consensus 109 G--~~v~~~~~~------~~~~l~~~~-~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~----- 174 (376)
T PRK06460 109 G--VNVDASNPG------SDNIIEKAK-SKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN----- 174 (376)
T ss_pred C--cEEEEECCC------CHHHHHHhc-CCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc-----
Confidence 3 334444332 234455544 3468998887655 46799999999999999999999999876531
Q ss_pred cCCCC-cccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 349 ASPFD-YCDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 349 ~~p~~-~aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
..++. .+|+++.|++|+|.|++ +|+++.+++
T Consensus 175 ~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~ 209 (376)
T PRK06460 175 QKPLELGADIVVHSASKFLAGHNDVIAGLAAGYGK 209 (376)
T ss_pred CChhhcCCCEEEeecceeccCCCCceEEEEecCHH
Confidence 12333 48999999999998875 788887654
No 144
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.54 E-value=2.4e-14 Score=147.84 Aligned_cols=170 Identities=13% Similarity=0.137 Sum_probs=116.3
Q ss_pred cccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccch-
Q 015609 188 YYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKK- 266 (403)
Q Consensus 188 ~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~- 266 (403)
.|.|.+...++|+ +++++||.++ .|.++|||.|+++++...++|||.| +... |+... +.
T Consensus 66 ~yag~~s~~~lE~----~va~~~G~~~-----av~v~sGT~Al~ll~~l~l~pGDeV--psn~---~f~Tt------~ah 125 (450)
T TIGR02618 66 AYAGSRNFYHLER----TVRELYGFKY-----VVPTHQGRGAENLLSQIAIKPGDYV--PGNM---YFTTT------RYH 125 (450)
T ss_pred hhcCCCcHHHHHH----HHHHHHCCCe-----EEEcCCHHHHHHHHHHhCCCCcCEE--CCce---eHHHH------HHH
Confidence 3566676778886 4889999997 3677899999887776678999987 3322 22110 11
Q ss_pred hhhcccceEEeeeec---------CCCCCCCCHHHHHHHhccCC---CcEEEEe-CCC-C-Ccc---ccHHHHHHHHHHc
Q 015609 267 VSAASIFFESFPYKV---------NPQTGYIDYEKLEEKAMDYR---PKILICG-GSS-Y-PRE---WDYGRFRQIADKC 328 (403)
Q Consensus 267 v~~~g~~~~vv~~~v---------d~~~g~ID~d~Le~~i~~~~---pklViv~-~s~-~-g~~---~Di~~I~~Iake~ 328 (403)
+...|. .++.+.. ++.++.+|+++|+++|++.. .++|.+. ..+ + |.+ .++++|.++|+++
T Consensus 126 Ie~~Ga--v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~ 203 (450)
T TIGR02618 126 QEKNGA--TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAH 203 (450)
T ss_pred HHhCCe--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHc
Confidence 233332 2222211 24578999999999998632 2344332 222 3 455 4689999999999
Q ss_pred CCEEEEeccccccccc------cccccCCC--------CcccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 329 GAVLMCDMAHISGLIA------AKELASPF--------DYCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 329 Ga~LivDaAh~~Glia------~g~~~~p~--------~~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
|++||.|+||++|-.. .+....++ .++|.+++|+||...+|.||+|+++++
T Consensus 204 Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~ 268 (450)
T TIGR02618 204 GIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDD 268 (450)
T ss_pred CCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCH
Confidence 9999999999996311 12222222 369999999999999999999998886
No 145
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.54 E-value=3e-13 Score=151.56 Aligned_cols=163 Identities=19% Similarity=0.205 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh----ccCCC----eEEecCCCCCccccccccCCccchhh
Q 015609 197 QIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL----LLPGD----RIMGLDSPSGGHLSHGYHTPGGKKVS 268 (403)
Q Consensus 197 ~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al----l~pGD----~VL~~~~ehgghlsh~~~~~~~~~v~ 268 (403)
+++...++.+++++|.+. +.+++.+|++|+.+++.++ .++|| +|+++...|+.+. +.+.
T Consensus 542 ~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp---------~sa~ 608 (954)
T PRK05367 542 ELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNP---------ASAV 608 (954)
T ss_pred HHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhH---------HHHH
Confidence 444556789999999986 5677777888886665444 35676 5888887765543 1233
Q ss_pred hcccceEEeeeecCCCCCCCCHHHHHHHhccCC--CcEEEEe-CCCCCc-cccHHHHHHHHHHcCCEEEEeccccccccc
Q 015609 269 AASIFFESFPYKVNPQTGYIDYEKLEEKAMDYR--PKILICG-GSSYPR-EWDYGRFRQIADKCGAVLMCDMAHISGLIA 344 (403)
Q Consensus 269 ~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~--pklViv~-~s~~g~-~~Di~~I~~Iake~Ga~LivDaAh~~Glia 344 (403)
..| ++++.++++. +|.+|+++|++++.+++ +.+|++. ++.+|. ..|+++|+++||++|+++++|+||..++++
T Consensus 609 ~~G--~~vv~v~~d~-~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~ 685 (954)
T PRK05367 609 MAG--MKVVVVACDE-NGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVG 685 (954)
T ss_pred HCC--CEEEEECCCC-CCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccC
Confidence 444 4666667763 68999999999997643 4445444 344554 368999999999999999999999877664
Q ss_pred cccccCCCC-cccEEEEcCcCCCcCCce------EEEEEeC
Q 015609 345 AKELASPFD-YCDIVTSTTHKSLRGPRG------GIIFFRR 378 (403)
Q Consensus 345 ~g~~~~p~~-~aDivt~StHKtL~GP~G------G~I~~~~ 378 (403)
. ..|.+ ++|++++++||||++|.| |++.+++
T Consensus 686 l---~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~ 723 (954)
T PRK05367 686 L---ARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKA 723 (954)
T ss_pred C---CChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecc
Confidence 2 23323 499999999999976664 5777764
No 146
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.54 E-value=2e-13 Score=139.01 Aligned_cols=179 Identities=20% Similarity=0.161 Sum_probs=120.6
Q ss_pred cchHHHHHHHHHHHHHHHHHcCCCCCCC----cceEEeCChHHHHHHHHhhhc--------cCC-----C-eEEecCCCC
Q 015609 190 TGNQYIDQIENLCFERALKAFDLDSDNW----GVNVQPYSCTSANFAVYTGLL--------LPG-----D-RIMGLDSPS 251 (403)
Q Consensus 190 ~G~~~~~~lE~~arerla~lfg~~~~~~----~v~V~~~SGT~An~aal~all--------~pG-----D-~VL~~~~eh 251 (403)
...+...++|..+.+.++++||.+...+ +..+++++||+||..++.+.- ..| . .|+++...
T Consensus 72 ~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a- 150 (373)
T PF00282_consen 72 EASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA- 150 (373)
T ss_dssp TTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-
T ss_pred ccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc-
Confidence 3457788899999999999999983211 235777889999998876541 112 2 34444433
Q ss_pred CccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCC-----CcEEEE--eCCCCCccccHHHHHHH
Q 015609 252 GGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYR-----PKILIC--GGSSYPREWDYGRFRQI 324 (403)
Q Consensus 252 gghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~-----pklViv--~~s~~g~~~Di~~I~~I 324 (403)
|.+ +. +.+.+.|.+ ++.+++++ ++.+|+++|++++.+.. |-+|++ +.+.+|.+-|+++|++|
T Consensus 151 --H~S---~~---Kaa~~lGlg--~~~I~~~~-~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i 219 (373)
T PF00282_consen 151 --HYS---IE---KAARILGLG--VRKIPTDE-DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADI 219 (373)
T ss_dssp ---TH---HH---HHHHHTTSE--EEEE-BBT-TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHH
T ss_pred --ccH---HH---HhcceeeeE--EEEecCCc-chhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhh
Confidence 332 21 556667765 55666775 68999999999886531 323333 34567889999999999
Q ss_pred HHHcCCEEEEecccccccccccccc---CCCCcccEEEEcCcCCCcCCce-EEEEEeCCC
Q 015609 325 ADKCGAVLMCDMAHISGLIAAKELA---SPFDYCDIVTSTTHKSLRGPRG-GIIFFRRGK 380 (403)
Q Consensus 325 ake~Ga~LivDaAh~~Glia~g~~~---~p~~~aDivt~StHKtL~GP~G-G~I~~~~~~ 380 (403)
|+++++++|||+|.+........+. ..++.+|.++.++||++..|.+ |++++++..
T Consensus 220 ~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~ 279 (373)
T PF00282_consen 220 CEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKS 279 (373)
T ss_dssp HHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGG
T ss_pred ccccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeeccc
Confidence 9999999999999776444333222 1223599999999999999987 888888864
No 147
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.54 E-value=1.4e-13 Score=152.03 Aligned_cols=150 Identities=19% Similarity=0.231 Sum_probs=111.7
Q ss_pred HHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc-------C-CCeEEecCCCCCccccccccCCccchhhhcccce
Q 015609 203 FERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL-------P-GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFF 274 (403)
Q Consensus 203 rerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~-------p-GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~ 274 (403)
++.+++++|.+. +.+++.||+.|++++++++-. + .++|+++...|+.+.. ..... ++
T Consensus 549 q~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa---------sa~~~--Gi 613 (954)
T PRK12566 549 EAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA---------SAQMA--GM 613 (954)
T ss_pred HHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH---------HHHHC--CC
Confidence 357999999998 578999999999888888632 2 3567888877654421 12223 35
Q ss_pred EEeeeecCCCCCCCCHHHHHHHhccCCCcE--EEEe-CCCCC-ccccHHHHHHHHHHcCCEEEEeccccccccccccccC
Q 015609 275 ESFPYKVNPQTGYIDYEKLEEKAMDYRPKI--LICG-GSSYP-REWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELAS 350 (403)
Q Consensus 275 ~vv~~~vd~~~g~ID~d~Le~~i~~~~pkl--Viv~-~s~~g-~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~ 350 (403)
+++.+++|+ +|.+|+++|++++.+.++++ |++. .+++| ...|+++|+++||++|+++++|+||..+++.. ..
T Consensus 614 eVv~Vp~D~-~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l---~~ 689 (954)
T PRK12566 614 RVVIVECDP-DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGL---AR 689 (954)
T ss_pred EEEEeccCC-CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCC---CC
Confidence 677777774 78999999999997555554 3443 33444 34679999999999999999999998776542 23
Q ss_pred CCC-cccEEEEcCcCCCcCCce
Q 015609 351 PFD-YCDIVTSTTHKSLRGPRG 371 (403)
Q Consensus 351 p~~-~aDivt~StHKtL~GP~G 371 (403)
|-+ +||++++++||||++|+|
T Consensus 690 Pg~~GADi~~~s~HKtf~~P~G 711 (954)
T PRK12566 690 PADIGADVSHMNLHKTFCIPHG 711 (954)
T ss_pred hhhcCCCEEEecCCcccCcCcc
Confidence 333 499999999999998886
No 148
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.53 E-value=7.3e-14 Score=141.70 Aligned_cols=167 Identities=22% Similarity=0.226 Sum_probs=124.1
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCC
Q 015609 183 YPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTP 262 (403)
Q Consensus 183 ~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~ 262 (403)
+-++|+ |++..+.+|. .++++.|+++ .+.+.||+.|+..++..|+++|++|+.....|+|... ++.
T Consensus 69 ~~Ysr~--~nPt~~~le~----~iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~--~l~- 134 (409)
T KOG0053|consen 69 YDYSRS--GNPTRDVLES----GIAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLR--ILR- 134 (409)
T ss_pred cccccC--CCCchHHHHH----HHHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHH--HHH-
Confidence 334444 6788888886 4889999987 3778999999999999999999999999999988642 111
Q ss_pred ccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCC--ccccHHHHHHHHHHcCCEEEEeccccc
Q 015609 263 GGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYP--REWDYGRFRQIADKCGAVLMCDMAHIS 340 (403)
Q Consensus 263 ~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g--~~~Di~~I~~Iake~Ga~LivDaAh~~ 340 (403)
+.....| .+...+++ -|++++++++++ ++++|+++.+.+| .+.||++|+++||++|++++||.+-+
T Consensus 135 --~~~~~~g--ie~~~vd~------~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~- 202 (409)
T KOG0053|consen 135 --KFLPKFG--GEGDFVDV------DDLKKILKAIKE-NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFG- 202 (409)
T ss_pred --HHHHHhC--ceeeeech------hhHHHHHHhhcc-CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcC-
Confidence 0001111 22222221 245666666665 6899999987776 57899999999999999999999833
Q ss_pred cccccccccCCCCc-ccEEEEcCcCCCcCCc---eEEEEEeCC
Q 015609 341 GLIAAKELASPFDY-CDIVTSTTHKSLRGPR---GGIIFFRRG 379 (403)
Q Consensus 341 Glia~g~~~~p~~~-aDivt~StHKtL~GP~---GG~I~~~~~ 379 (403)
.++...|+.+ ||||+.|..|+|.|.. ||+++.+..
T Consensus 203 ----~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~ 241 (409)
T KOG0053|consen 203 ----SPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSE 241 (409)
T ss_pred ----cccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcH
Confidence 3345567775 9999999999999976 688888743
No 149
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.53 E-value=2.6e-13 Score=140.92 Aligned_cols=177 Identities=16% Similarity=0.106 Sum_probs=118.2
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH-HHHHHHHhhhc--c-CCCeEEecCCCCCccccccccCCccch
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT-SANFAVYTGLL--L-PGDRIMGLDSPSGGHLSHGYHTPGGKK 266 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT-~An~aal~all--~-pGD~VL~~~~ehgghlsh~~~~~~~~~ 266 (403)
|+...-.+.+...+.+++++|.+... ..+.+.+|| .++.+++.++- + +||.|+++...|-+.. +.
T Consensus 99 gss~~~~l~~~~e~~~~~~~G~~~~~--~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~---------kA 167 (444)
T TIGR03531 99 GSSLLYKLTNKLVKDFLKLLGLRSIK--SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCI---------KA 167 (444)
T ss_pred CccHHHHHHHHHHHHHHHHcCCCCCC--EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHH---------HH
Confidence 33333445555566799999998321 135566788 57877777663 2 5899999886542221 44
Q ss_pred hhhcccceEEeeee--cCCCCCCCCHHHHHHHhccC--CCcEEEEeCCC-CC--ccccHHHHHHHHHHcCCEEEEecccc
Q 015609 267 VSAASIFFESFPYK--VNPQTGYIDYEKLEEKAMDY--RPKILICGGSS-YP--REWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 267 v~~~g~~~~vv~~~--vd~~~g~ID~d~Le~~i~~~--~pklViv~~s~-~g--~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
+.+.|.. .+.++ +++++..+|+++|+++|.+. +..++++..++ ++ ...|+++|+++|+++|+++|+|+||+
T Consensus 168 i~~~G~~--pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg 245 (444)
T TIGR03531 168 ISTAGFE--PRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYG 245 (444)
T ss_pred HHHcCCe--EEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCc
Confidence 5666653 44444 45667889999999999753 33444554333 33 57899999999999999999999999
Q ss_pred ccccccccc-cCCCC--cccEEEEcCcCCCcCCc-eEEEEEeCCC
Q 015609 340 SGLIAAKEL-ASPFD--YCDIVTSTTHKSLRGPR-GGIIFFRRGK 380 (403)
Q Consensus 340 ~Glia~g~~-~~p~~--~aDivt~StHKtL~GP~-GG~I~~~~~~ 380 (403)
.+....... ...+. .+|++++++||++..|. ||+|+++++.
T Consensus 246 ~~~~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~e 290 (444)
T TIGR03531 246 LQSNKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDEN 290 (444)
T ss_pred CcChhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHH
Confidence 765321111 11222 37999999999998765 5777786653
No 150
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.53 E-value=4e-13 Score=135.37 Aligned_cols=183 Identities=19% Similarity=0.212 Sum_probs=120.4
Q ss_pred CccC----cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHh
Q 015609 160 ENFV----CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYT 235 (403)
Q Consensus 160 en~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~ 235 (403)
+||+ +|.|+++....+ .+|. | ..+...++ ++.+++++|.+++ ..+.++||++||..++.
T Consensus 27 ~~ylgl~~~~~~~~~~~~~~-~~~~-g--------~~~~~~~L----e~~lA~~~g~~~e---~ilv~~gg~~a~~~~~~ 89 (346)
T TIGR03576 27 YDLTGLAGGFKIDEEDLELL-ETYV-G--------PAIFEEKV----QELGREHLGGPEE---KILVFNRTSSAILATIL 89 (346)
T ss_pred cccccCCCChhHHHHHHHHH-HHhc-C--------CHHHHHHH----HHHHHHHcCCCcc---eEEEECCHHHHHHHHHH
Confidence 4676 888888877654 3442 1 12333444 4569999999554 24667789999999999
Q ss_pred hhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC-CCc
Q 015609 236 GLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS-YPR 314 (403)
Q Consensus 236 all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~-~g~ 314 (403)
++++|||+|++...+...| .++. ..+.+.|. +++ .+ .|+++++. . .++++|++..++ .|.
T Consensus 90 al~~~gd~Vli~~~d~p~~---~s~~---~~~~l~ga--~~~--~~------~~l~~l~~-~--~~~~lIiitg~s~~G~ 150 (346)
T TIGR03576 90 ALEPPGRKVVHYLPEKPAH---PSIP---RSCKLAGA--EYF--ES------DELSELKK-I--DGTSLVVITGSTMDLK 150 (346)
T ss_pred HhCCCCCEEEECCCCCCCc---hhHH---HHHHHcCC--EEe--cc------CCHHHHhh-C--cCceEEEEECCCCCCc
Confidence 9999999998754333333 3221 12333342 221 11 24555432 2 357777665433 343
Q ss_pred c---ccHHHHHHHHHHcCCEEEEecccccccccc-ccccCCCC-cccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 315 E---WDYGRFRQIADKCGAVLMCDMAHISGLIAA-KELASPFD-YCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 315 ~---~Di~~I~~Iake~Ga~LivDaAh~~Glia~-g~~~~p~~-~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
+ .|+++|.++|+++|++|++|.||+.|.... +.. .... .+|+++.|++|+|.|++||+++++++
T Consensus 151 v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~-~~~~~~~divv~s~SKalaG~r~G~v~~~~~ 219 (346)
T TIGR03576 151 VVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQP-PALDLGADLVVTSTDKLMDGPRGGLLAGRKE 219 (346)
T ss_pred ccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCC-CHHHcCCcEEEeccchhccccceEEEEeCHH
Confidence 4 589999999999999999999999876421 110 1011 37899999999999999999998874
No 151
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.51 E-value=2.1e-13 Score=138.27 Aligned_cols=157 Identities=19% Similarity=0.133 Sum_probs=107.5
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhc
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA 270 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~ 270 (403)
+++...++|+ ++++++ .+. .|.++||+.|+.+++.+++++||+|++....|++..... + ..+.
T Consensus 49 ~~p~~~~Le~----~lA~l~-~~~-----~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~------~-~~l~ 111 (366)
T PRK07582 49 SNPTWRALEA----ALGELE-GAE-----ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALA------R-EYLA 111 (366)
T ss_pred CCccHHHHHH----HHHHHc-CCC-----EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHH------H-HHHh
Confidence 4555666765 478888 333 577899999999999999999999999876664431100 0 0011
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHcCCEEEEeccccccccccccc
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL 348 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~ 348 (403)
..++++..++.+.. .+ . +. .++++|+++.+++ +.+.|+++|.++|+++|+++++|++|+.+. +
T Consensus 112 ~~G~~v~~v~~~~~-----~~---~-~~-~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~---~-- 176 (366)
T PRK07582 112 PLGVTVREAPTAGM-----AE---A-AL-AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL---G-- 176 (366)
T ss_pred cCeEEEEEECCCCh-----HH---H-hc-cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc---c--
Confidence 12345555554321 11 2 22 3578888876555 357899999999999999999999986432 1
Q ss_pred cCCCC-cccEEEEcCcCCCcCCce---EEEEEeCC
Q 015609 349 ASPFD-YCDIVTSTTHKSLRGPRG---GIIFFRRG 379 (403)
Q Consensus 349 ~~p~~-~aDivt~StHKtL~GP~G---G~I~~~~~ 379 (403)
..|++ .+|++++|+||+|.||.| |+++++++
T Consensus 177 ~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~ 211 (366)
T PRK07582 177 QRPLELGADLVVASDTKALTGHSDLLLGYVAGRDP 211 (366)
T ss_pred cCchhcCCcEEEecccccccCCCCeeEEEEEcCcH
Confidence 13444 489999999999999764 88887643
No 152
>PRK15029 arginine decarboxylase; Provisional
Probab=99.50 E-value=1.2e-13 Score=150.77 Aligned_cols=164 Identities=15% Similarity=0.060 Sum_probs=115.7
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015609 201 LCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 201 ~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
+|++.++++||++.. ....++.|.+|.+++.+++++||+|++.+..|.+.+ |+ +.+.|.. .+++.
T Consensus 209 eAq~~aA~~fgA~~t----~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~-~a--------l~L~ga~--Pvyl~ 273 (755)
T PRK15029 209 ESEKYAARVFGADRS----WSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIE-QG--------LILTGAK--PVYMV 273 (755)
T ss_pred HHHHHHHHHhCCCcE----EEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-HH--------HHHcCCe--EEEec
Confidence 477889999999984 233344567999999999999999999997655443 22 4455542 33322
Q ss_pred cC-CCC---CCCC-----HHHHHHHhccCC-Cc--------EEEEe-CCCCCccccHHHHHHHHHHcCCEEEEecccccc
Q 015609 281 VN-PQT---GYID-----YEKLEEKAMDYR-PK--------ILICG-GSSYPREWDYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 281 vd-~~~---g~ID-----~d~Le~~i~~~~-pk--------lViv~-~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
.. .+. +.|+ ++.|+++++++. .| ++++. ++.+|...|+++|+++|+++|++|+||.||++.
T Consensus 274 P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah 353 (755)
T PRK15029 274 PSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_pred ccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECccccc
Confidence 11 112 2355 999999986542 23 55554 556799999999999999999999999999997
Q ss_pred cccccccc--CCC-------Cccc-EEEEcCcCCCcCCce-EEEEEeCC
Q 015609 342 LIAAKELA--SPF-------DYCD-IVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 342 lia~g~~~--~p~-------~~aD-ivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+...+.++ .++ .++| +++.|+||+|++... ++|..+..
T Consensus 354 ~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 354 ARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred cccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 65444443 333 2488 999999999988764 66666443
No 153
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.47 E-value=1.6e-13 Score=133.07 Aligned_cols=198 Identities=23% Similarity=0.316 Sum_probs=147.7
Q ss_pred hcccceeccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccchHHH-HHHHHHHHHHHHHHcCCCCCCCcceEEeCC
Q 015609 151 FKGIELIASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTGNQYI-DQIENLCFERALKAFDLDSDNWGVNVQPYS 225 (403)
Q Consensus 151 ~~~l~LiaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~-~~lE~~arerla~lfg~~~~~~~v~V~~~S 225 (403)
..+|.++.++||+ +|++.++-...+ ..|+.|..+.|+..|.+.+ ..||. .+++|.+.+. .+...|
T Consensus 66 ~k~ilnFcaNnYLGLsshPeii~a~~~al-eeyGaGlssvrfIcGtq~iHk~LE~----kiAqfh~rED-----~ilyps 135 (417)
T KOG1359|consen 66 DKKILNFCANNYLGLSSHPEIINAGQKAL-EEYGAGLSSVRFICGTQDIHKLLES----KIAQFHGRED-----TILYPS 135 (417)
T ss_pred ccceeeecccccccccCChHHHHHHHHHH-HHhCCCccceeEEecchHHHHHHHH----HHHHHhCCCc-----eEEecc
Confidence 3457778899998 899999987665 5688899999999999765 56665 5899999887 355669
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc---CCC
Q 015609 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD---YRP 302 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~---~~p 302 (403)
|..||..++-+++.|.|.|+...+.|.+.+ ++ +.++.+ -+.+|+-.++..+.+ .+-
T Consensus 136 cfdANag~feail~pedAvfSDeLNhASII-dG--------irLckr------------y~h~dv~~l~~~l~~a~k~r~ 194 (417)
T KOG1359|consen 136 CFDANAGAFEAILTPEDAVFSDELNHASII-DG--------IRLCKR------------YRHVDVFDLEHCLISACKMRL 194 (417)
T ss_pred ccccchHHHHHhcChhhhhhccccccchhh-hh--------hHHHhh------------hccchhHHHHHHHHHhhhheE
Confidence 999999999999999999999888753332 12 233321 134666666655442 344
Q ss_pred cEEEEeC--CCCCccccHHHHHHHHHHcCCEEEEecccccccccc-c--c--ccCCCCcccEEEEcCcCCCcCCceEEEE
Q 015609 303 KILICGG--SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA-K--E--LASPFDYCDIVTSTTHKSLRGPRGGIIF 375 (403)
Q Consensus 303 klViv~~--s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~-g--~--~~~p~~~aDivt~StHKtL~GP~GG~I~ 375 (403)
|+|+... |.-|-+.|+++|.+++++||++|++|.+|+.|.... | . ..+....+|++..|..|.++|-.||++.
T Consensus 195 klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGytt 274 (417)
T KOG1359|consen 195 KLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTT 274 (417)
T ss_pred EEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCcc
Confidence 6666653 334566789999999999999999999999998663 1 1 1122235899999999999999999999
Q ss_pred EeCC
Q 015609 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
+.++
T Consensus 275 gp~~ 278 (417)
T KOG1359|consen 275 GPKP 278 (417)
T ss_pred CChh
Confidence 8875
No 154
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.45 E-value=1.8e-12 Score=128.98 Aligned_cols=197 Identities=19% Similarity=0.232 Sum_probs=130.9
Q ss_pred eccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHH
Q 015609 157 IASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVY 234 (403)
Q Consensus 157 iaSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal 234 (403)
+.|.|+. +|+++++|...-. -+..-|+-.+....+|+ +++++||... .+++.|||+||..++
T Consensus 4 f~SDn~~g~~~~m~eam~~a~~-------~~~~~YG~D~~~~~~e~----~~ae~~g~~a-----~~Fv~sGT~aN~lal 67 (342)
T COG2008 4 FRSDNVAGPTPEMREALAAANA-------VGDDVYGEDPTTNALEQ----RIAELFGKEA-----ALFVPSGTQANQLAL 67 (342)
T ss_pred cccCccCCCCHHHHHHHHhccc-------cCCCCCCCCHHHHHHHH----HHHHHhCCce-----EEEecCccHHHHHHH
Confidence 3466664 8999999985321 22334555577777776 5899999843 466779999999999
Q ss_pred hhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHHHHHhccC------CCcEEEE
Q 015609 235 TGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKLEEKAMDY------RPKILIC 307 (403)
Q Consensus 235 ~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~Le~~i~~~------~pklViv 307 (403)
.+.++||+.|++-...| + +..+.|. ....+. ..++.+.+ .+|.+++++|+..++.. +|.+++.
T Consensus 68 ~~~~~~~~~vi~~~~aH---i---~~~E~Ga-~~~~~~---~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e 137 (342)
T COG2008 68 AAHCQPGESVICHETAH---I---YTDECGA-PEFFGG---GQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLE 137 (342)
T ss_pred HHhcCCCCeEEEecccc---c---eecccCc-HHHHcC---CceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEe
Confidence 99999999999977543 2 2111111 122221 12222222 57999999999988742 2344444
Q ss_pred eC-CCCCcccc---HHHHHHHHHHcCCEEEEecccccccccc-ccccCCCC-cccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 308 GG-SSYPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAA-KELASPFD-YCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 308 ~~-s~~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~-g~~~~p~~-~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
.. +.+|++.+ +++|.++||++|++||+|+|-..-.... +.....+. ++|++++++.|.++.|-|.+++.+..
T Consensus 138 ~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~ 215 (342)
T COG2008 138 NTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRD 215 (342)
T ss_pred eccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHH
Confidence 33 34677665 5667788999999999999977654332 21111111 59999999999988787777777654
No 155
>PRK07049 methionine gamma-lyase; Validated
Probab=99.43 E-value=2.7e-12 Score=132.90 Aligned_cols=167 Identities=17% Similarity=0.207 Sum_probs=117.6
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCcc
Q 015609 185 GARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGG 264 (403)
Q Consensus 185 gsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~ 264 (403)
++|| +++....+|+ ++++++|.+. .+.++||++|+.+++.+++++||+|++....|++..... .
T Consensus 77 y~R~--~~Pt~~~Le~----~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~--~--- 140 (427)
T PRK07049 77 YSRF--NHPNSEIVED----RLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLL--A--- 140 (427)
T ss_pred ccCC--CCcCHHHHHH----HHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHH--H---
Confidence 3444 4555666765 4889999875 477889999999999999999999999988877653110 0
Q ss_pred chhhhcccceEEeeeecCCCCCCCCHHHHHHHhc----cCCCcEEEEeCCCC--CccccHHHHHHHHHH------cCCEE
Q 015609 265 KKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAM----DYRPKILICGGSSY--PREWDYGRFRQIADK------CGAVL 332 (403)
Q Consensus 265 ~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~----~~~pklViv~~s~~--g~~~Di~~I~~Iake------~Ga~L 332 (403)
..+...| ++++.+. + ..|++++++.+. +.++|+|+++..++ +.+.|+++|.+||++ +++++
T Consensus 141 ~~l~~~G--i~~v~~~-~----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~v 213 (427)
T PRK07049 141 KTFRNFG--VGAVGFA-D----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPII 213 (427)
T ss_pred HHHHhcC--cEEEEEe-C----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEE
Confidence 0011123 3434443 1 267788877664 24689998876655 568999999999988 79999
Q ss_pred EEeccccccccccccccCCCC-cccEEEEcCcCCCcCC---ceEEEEEeCC
Q 015609 333 MCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGP---RGGIIFFRRG 379 (403)
Q Consensus 333 ivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP---~GG~I~~~~~ 379 (403)
++|.+-... ....|+. .+|+++.|+.|+++|+ ++|+++.+++
T Consensus 214 vvDety~~~-----~~~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~~ 259 (427)
T PRK07049 214 ACDNTLLGP-----VFQKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRKA 259 (427)
T ss_pred EEECCcccc-----ccCCccccCCCEEEEcCceeecCCCCcEEEEEECCHH
Confidence 999983322 2234554 3899999999999864 5688886653
No 156
>PRK10534 L-threonine aldolase; Provisional
Probab=99.43 E-value=2.2e-12 Score=127.63 Aligned_cols=191 Identities=16% Similarity=0.164 Sum_probs=122.2
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCC
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGD 242 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD 242 (403)
++|.+++++....... .+| .......++|+ .+++++|.++ + +++.+|++++..++.+++.+||
T Consensus 12 p~~~~~~a~~~~~~~~-------~~Y-~~~~~~~~L~~----~la~~~g~~~----~-~v~~~g~~a~~~~l~~~~~~gd 74 (333)
T PRK10534 12 PSRAMLEAMMAAPVGD-------DVY-GDDPTVNALQD----YAAELSGKEA----A-LFLPTGTQANLVALLSHCERGE 74 (333)
T ss_pred CCHHHHHHHHhccCCC-------ccc-CCCHHHHHHHH----HHHHHhCCCe----E-EEeCchHHHHHHHHHHhcCCCC
Confidence 6899999986432211 122 22344455554 5899999987 3 5677899999999998999999
Q ss_pred eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC-----CCcEEEEeCCCCCcccc
Q 015609 243 RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY-----RPKILICGGSSYPREWD 317 (403)
Q Consensus 243 ~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~-----~pklViv~~s~~g~~~D 317 (403)
+|++....|...... ......+ ..+.+.++++. ++.+|+++|++++.+. ++++|+++.+++|.+.+
T Consensus 75 ~vi~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~G~v~~ 145 (333)
T PRK10534 75 EYIVGQAAHNYLYEA-------GGAAVLG-SIQPQPIDAAA-DGTLPLDKVAAKIKPDDIHFARTRLLSLENTHNGKVLP 145 (333)
T ss_pred eeEEechhhhhHhcC-------CchHHhc-CceEEeecCCC-CCCCCHHHHHHhhcccCcCcccceEEEEecCCCCeecC
Confidence 999765443111000 0011111 13445555553 5789999999988643 57888877666788777
Q ss_pred HHH---HHHHHHHcCCEEEEecccccccccc-ccccCCC-CcccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 318 YGR---FRQIADKCGAVLMCDMAHISGLIAA-KELASPF-DYCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 318 i~~---I~~Iake~Ga~LivDaAh~~Glia~-g~~~~p~-~~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
.++ |.++|+++|++|++|.|+..+.... +.....+ .+.|.++.|++|.++.+.||+++.+++
T Consensus 146 ~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~~ 212 (333)
T PRK10534 146 REYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRD 212 (333)
T ss_pred HHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCHH
Confidence 655 5578889999999999987543211 1100011 235766778999877676767776554
No 157
>PRK12414 putative aminotransferase; Provisional
Probab=99.39 E-value=3.4e-11 Score=122.20 Aligned_cols=220 Identities=15% Similarity=0.200 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHhhhcccceeccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCC
Q 015609 138 EIFDIMEKEKQRQFKGIELIASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSD 215 (403)
Q Consensus 138 ei~~li~~e~~rq~~~l~LiaSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~ 215 (403)
.+...+.+- ..+...|.|-.+++.. ++.+.+++...+.... ..|+. ..|. ..+.+...+.+++++|.+..
T Consensus 17 ~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~---~~lr~~ia~~l~~~~g~~~~ 88 (384)
T PRK12414 17 TIFTVIGQL-AAQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-NQYAP---MAGI---AALREALAEKTERLYGARYD 88 (384)
T ss_pred cHHHHHHHH-HHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-CCcCC---CCCc---HHHHHHHHHHHHHHhCCCCC
Confidence 355544332 2345567776665443 7788888876554321 11111 1232 23333345567888897521
Q ss_pred -CCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHH
Q 015609 216 -NWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLE 294 (403)
Q Consensus 216 -~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le 294 (403)
.. -.+.++++++|+..++.+++.+||+|++....|.+.. ..+...| .+++.+++++++..+|+++|+
T Consensus 89 ~~~-~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---------~~~~~~g--~~~~~v~~~~~~~~~d~~~l~ 156 (384)
T PRK12414 89 PAS-EVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYA---------PIVRLQG--ATPVAIKLSPEDFRVNWDEVA 156 (384)
T ss_pred CCC-cEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchH---------HHHHHcC--CEEEEEecCccccccCHHHHH
Confidence 00 1344556788999999999999999999887764321 1123334 355666666545679999999
Q ss_pred HHhccCCCcEEEEeCCCC--Ccc---ccHHHHHHHHHHcCCEEEEeccccccccccccccCCC---Cc---ccEEEEcCc
Q 015609 295 EKAMDYRPKILICGGSSY--PRE---WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---DY---CDIVTSTTH 363 (403)
Q Consensus 295 ~~i~~~~pklViv~~s~~--g~~---~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~~---aDivt~StH 363 (403)
++++. ++|+|++...++ |.. .++++|.++|+++|+++++|.++.--.. .+....++ .. --+++.|+.
T Consensus 157 ~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~-~~~~~~~~~~~~~~~~~~i~~~SfS 234 (384)
T PRK12414 157 AAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVF-DGARHHSMARHRELAERSVIVSSFG 234 (384)
T ss_pred hhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccC-CCCCccCcccCcCccCcEEEEeccc
Confidence 98864 688887764444 443 4688899999999999999999764221 11111111 11 237889999
Q ss_pred CCC--cCCceEEEEEeCC
Q 015609 364 KSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 364 KtL--~GP~GG~I~~~~~ 379 (403)
|.+ .|-|-|+++..++
T Consensus 235 K~~~~pGlRiG~~v~~~~ 252 (384)
T PRK12414 235 KSYHVTGWRVGYCLAPAE 252 (384)
T ss_pred ccccCccceEEEEecCHH
Confidence 987 3455699987654
No 158
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.39 E-value=1.2e-11 Score=120.94 Aligned_cols=146 Identities=21% Similarity=0.167 Sum_probs=98.2
Q ss_pred EEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCH--HHHHHHhc
Q 015609 221 VQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDY--EKLEEKAM 298 (403)
Q Consensus 221 V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~--d~Le~~i~ 298 (403)
++..++|+|+.+++.++.++||+|++....|.++. ..+...+ ++++.++.++ .+..+. +.++.++
T Consensus 63 ~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~---------~~~~~~~--~~~~~i~~~~-~~~~~~~~~~~~~~~- 129 (350)
T cd00609 63 VVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYE---------AAARLAG--AEVVPVPLDE-EGGFLLDLELLEAAK- 129 (350)
T ss_pred EEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHH---------HHHHHCC--CEEEEEeccc-ccCCccCHHHHHhhc-
Confidence 44556789999999999999999999987765542 1233333 4455556654 344444 5555544
Q ss_pred cCCCcEEEEeCCC--CCccccHHHH---HHHHHHcCCEEEEeccccccccccccc---cCCCC-cccEEEEcCcCCCc--
Q 015609 299 DYRPKILICGGSS--YPREWDYGRF---RQIADKCGAVLMCDMAHISGLIAAKEL---ASPFD-YCDIVTSTTHKSLR-- 367 (403)
Q Consensus 299 ~~~pklViv~~s~--~g~~~Di~~I---~~Iake~Ga~LivDaAh~~Glia~g~~---~~p~~-~aDivt~StHKtL~-- 367 (403)
..++++|++.... .|...|++++ .++|+++|+++++|++|+.+....... ...-. .+|+++.|+||+++
T Consensus 130 ~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~ 209 (350)
T cd00609 130 TPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLP 209 (350)
T ss_pred CccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCc
Confidence 3468888776543 4667775555 589999999999999998765432111 11111 37899999999985
Q ss_pred CCceEEEEEeCC
Q 015609 368 GPRGGIIFFRRG 379 (403)
Q Consensus 368 GP~GG~I~~~~~ 379 (403)
|++.|+++++++
T Consensus 210 g~~~G~i~~~~~ 221 (350)
T cd00609 210 GLRIGYLIAPPE 221 (350)
T ss_pred ccceEEEecCHH
Confidence 556699988773
No 159
>PLN02452 phosphoserine transaminase
Probab=99.38 E-value=3.7e-12 Score=129.44 Aligned_cols=206 Identities=17% Similarity=0.097 Sum_probs=130.3
Q ss_pred hhcccceeccCccCcHHHHHHHHHHhhhcCCCCCC-CCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHH
Q 015609 150 QFKGIELIASENFVCRAVMEALGSHLTNKYSEGYP-GARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTS 228 (403)
Q Consensus 150 q~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~p-gsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~ 228 (403)
|.+.+++.|++..++++|++++...+.+.-..|.. -...+.+.++.+.++ .+++.++++++.+. .|.+.+...|||.
T Consensus 5 ~~~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~-~~~~~L~~l~~~p~-~y~v~~l~Gsgt~ 82 (365)
T PLN02452 5 QGRVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQ-KAEADLRELLDIPD-NYEVLFLQGGAST 82 (365)
T ss_pred CCceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHH-HHHHHHHHHhCCCC-CceEEEEeCccHH
Confidence 34468899999999999999999887653222211 012234566666555 48999999999853 3435444568999
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe
Q 015609 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~ 308 (403)
++.+++.+++.+||++++.. .|.++.... +.+...|....+........+..+|+++++. ..+.+.|.+.
T Consensus 83 ~~ea~~~nl~~~~~~~l~~~---~G~fg~r~~----~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~ 152 (365)
T PLN02452 83 QFAAIPLNLCKPGDKADFVV---TGSWSKKAA----KEAKKYCKTNVIASGKDEKYTKIPSVSEWEL---TPDAKFVHIC 152 (365)
T ss_pred HHHHHHHhcCCCCCeEEEEE---CCHHHHHHH----HHHHHhCCCcEEEecCCCCCCCCCChHHcCC---CCCCcEEEEC
Confidence 99999999999999998876 444443211 1112223211111111111112466666421 2235666554
Q ss_pred --CCCCCc-cccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 309 --GSSYPR-EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 309 --~s~~g~-~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+++|. ..|++++. +++++||+++++|..+ .+++..+++.+|.||+| ||.| |+++.++.
T Consensus 153 hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~p-----idv~~~~v~~~saqK~l-GP~Gl~~v~vr~~ 215 (365)
T PLN02452 153 ANETIHGVEFKDYPDVG------NVPLVADMSSNFLSKP-----VDVSKYGVIYAGAQKNV-GPSGVTIVIIRKD 215 (365)
T ss_pred CCCCCCcEecCcccccC------CCeEEEECCccccCcc-----cCHHHcCEEEEeccccc-CCCCeEEEEEcHH
Confidence 345677 47777664 3899999999999754 23333556668999987 7999 77777764
No 160
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.38 E-value=6.4e-12 Score=124.88 Aligned_cols=196 Identities=16% Similarity=0.125 Sum_probs=127.0
Q ss_pred ccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC-hHHH
Q 015609 153 GIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYS-CTSA 229 (403)
Q Consensus 153 ~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~S-GT~A 229 (403)
-|+|..+.+. .+|.+++++..++.... .++. .. .. ..|+.++++++++++ +|++++ ++++
T Consensus 21 ~i~l~~~~~~~~~~~~~~~a~~~~~~~~~--~y~~------~~-~~----~lr~~ia~~~~~~~~----~i~~~~G~~~~ 83 (346)
T TIGR01141 21 VIKLNSNENPFGPPPKAKEALRAEADKLH--RYPD------PD-PA----ELKQALADYYGVDPE----QILLGNGSDEI 83 (346)
T ss_pred eEEccCCCCCCCCCHHHHHHHHHhHHHhh--cCCC------CC-HH----HHHHHHHHHhCcChH----HEEEcCCHHHH
Confidence 3555544433 58889999887653221 1211 11 12 246678999998764 455655 5678
Q ss_pred HHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015609 230 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 230 n~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
+..++.+++++||+|++....+..+. ......| .+++.+++++ ++.+|++++++++. .++++|++..
T Consensus 84 l~~~~~~l~~~gd~v~~~~p~y~~~~---------~~~~~~g--~~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~v~l~~ 150 (346)
T TIGR01141 84 IELLIRAFLEPGDAVLVPPPTYSMYE---------ISAKIHG--AEVVKVPLDE-DGQLDLEDILVAID-DKPKLVFLCS 150 (346)
T ss_pred HHHHHHHhcCCCCEEEEcCCCHHHHH---------HHHHHcC--CeEEEeccCC-CCCCCHHHHHHhcC-CCCCEEEEeC
Confidence 88888999999999999886543221 0112233 4566677764 47799999999875 3678887764
Q ss_pred CC--CCccccHHHHHHHHHHc--CCEEEEeccccccccccccccCCCC-c-ccEEEEcCcCCCc--CCceEEEEEeCC
Q 015609 310 SS--YPREWDYGRFRQIADKC--GAVLMCDMAHISGLIAAKELASPFD-Y-CDIVTSTTHKSLR--GPRGGIIFFRRG 379 (403)
Q Consensus 310 s~--~g~~~Di~~I~~Iake~--Ga~LivDaAh~~Glia~g~~~~p~~-~-aDivt~StHKtL~--GP~GG~I~~~~~ 379 (403)
.+ +|...+++++.++|+.+ |+++++|.+|. .+...+.....+. . ..+++.|++|+++ |.+.|+++.++.
T Consensus 151 p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~ 227 (346)
T TIGR01141 151 PNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAE 227 (346)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHH
Confidence 43 46789999999999987 99999999987 2222110000111 1 3477889999973 445599888654
No 161
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.38 E-value=4.4e-11 Score=120.90 Aligned_cols=203 Identities=18% Similarity=0.142 Sum_probs=125.8
Q ss_pred hcccceeccCc--cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHH
Q 015609 151 FKGIELIASEN--FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTS 228 (403)
Q Consensus 151 ~~~l~LiaSen--~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~ 228 (403)
.+-|.|-..+| ..++.+++++...+.......++.. .| .. ..|+.+++++|++++. .+++.++++
T Consensus 28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~---~g------~~-~lr~~ia~~l~~~~~~---v~~~~g~t~ 94 (380)
T PRK06225 28 KEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPP---EG------FP-ELRELILKDLGLDDDE---ALITAGATE 94 (380)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCC---cc------hH-HHHHHHHHhcCCCCCc---EEEeCCHHH
Confidence 34455554555 3588999998877653211111110 11 22 2467799999998752 234456788
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC--CCCCCCHHHHHHHhccCCCcEEE
Q 015609 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP--QTGYIDYEKLEEKAMDYRPKILI 306 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~--~~g~ID~d~Le~~i~~~~pklVi 306 (403)
|+..++.+++.+||+|++.+..+..+. ..+...| .++++++++. .++.+|++++++++.. ++++|+
T Consensus 95 al~~~~~~~~~~gd~vl~~~p~y~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~v~ 162 (380)
T PRK06225 95 SLYLVMRAFLSPGDNAVTPDPGYLIID---------NFASRFG--AEVIEVPIYSEECNYKLTPELVKENMDE-NTRLIY 162 (380)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchH---------HHHHHhC--ceEEeeccccccCCccCCHHHHHhhcCC-CceEEE
Confidence 999999999999999999886543221 1122334 3455555432 1347999999998864 578876
Q ss_pred EeCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCc--CCceEEEEEeC
Q 015609 307 CGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLR--GPRGGIIFFRR 378 (403)
Q Consensus 307 v~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~--GP~GG~I~~~~ 378 (403)
+..++ +|... ++++|.++|+++|+++++|+++. .+.........++ ...+++.|++|+|+ |.+.|++++++
T Consensus 163 l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~ 241 (380)
T PRK06225 163 LIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYR-DFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATP 241 (380)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHH-HHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCH
Confidence 55443 35443 58999999999999999999863 1111000000111 24567778899883 33348998865
Q ss_pred C
Q 015609 379 G 379 (403)
Q Consensus 379 ~ 379 (403)
.
T Consensus 242 ~ 242 (380)
T PRK06225 242 D 242 (380)
T ss_pred H
Confidence 4
No 162
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.37 E-value=5.6e-12 Score=125.96 Aligned_cols=224 Identities=23% Similarity=0.292 Sum_probs=122.2
Q ss_pred HHHHHHhhhcccceeccCccCcHHHHHHHHHHhhhcC-CCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceE
Q 015609 143 MEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKY-SEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNV 221 (403)
Q Consensus 143 i~~e~~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y-~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V 221 (403)
.+++.+.+...+.-++-.|. ..|++|+...=...+ ..+..|-.| +..-++.||+. .++.||++.+. |..
T Consensus 7 ~e~~~~~~f~~id~i~~~Nq--~KVL~Af~~~~vs~~hf~~tTGYGY--~D~GRd~le~i----yA~vfgaE~AL--VRp 76 (403)
T PF06838_consen 7 AEKELQPQFKEIDEIAEYNQ--LKVLKAFQENRVSDSHFAGTTGYGY--DDIGRDKLERI----YADVFGAEDAL--VRP 76 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTT--GGGCS---TT-T--T-HHHHHHHHH----HHHHCT-SEEE--EET
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHcCCChhhcCCCCcCCC--CCccHHHHHHH----HHHHhCchhhh--hcc
Confidence 34444444444554444443 377887654211111 112222222 34456777764 78999999852 222
Q ss_pred EeCChHHHHHHHHhhhccCCCeEEecCC-CC---------CccccccccCCccchhhhcccceEEeeeecCCCCCCCCHH
Q 015609 222 QPYSCTSANFAVYTGLLLPGDRIMGLDS-PS---------GGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYE 291 (403)
Q Consensus 222 ~~~SGT~An~aal~all~pGD~VL~~~~-eh---------gghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d 291 (403)
++.|||.|+..++.++|+|||+++...- +| .|+ ..++ +.-.| +....+++.+ ++.+|++
T Consensus 77 q~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~-~~GS-------L~e~G--i~Y~~v~L~~-dg~~D~~ 145 (403)
T PF06838_consen 77 QFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGN-GPGS-------LKEFG--IKYREVPLTE-DGTIDWE 145 (403)
T ss_dssp TS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSS-SSSS-------TGGGT---EEEE--B-T-TSSB-HH
T ss_pred cccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCC-CCCC-------hHHhC--ceeEEEeecC-CCCcCHH
Confidence 4669999999999999999999986432 11 111 1121 11123 3344444543 5899999
Q ss_pred HHHHHhccCCCcEEEEeCC-CCC-----ccccHHHHHHHHHHc--CCEEEEeccccccccccccccCCCC-cccEEEEcC
Q 015609 292 KLEEKAMDYRPKILICGGS-SYP-----REWDYGRFRQIADKC--GAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTT 362 (403)
Q Consensus 292 ~Le~~i~~~~pklViv~~s-~~g-----~~~Di~~I~~Iake~--Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~St 362 (403)
.+++.++ .++|+|.+--| -|. .+.+++++.+++|+. +++++||.+-.= .. ....|.+ .||++++|.
T Consensus 146 ~i~~~~~-~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGE--Fv--E~~EP~~vGADl~aGSL 220 (403)
T PF06838_consen 146 AIKKALK-PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGE--FV--ETQEPTEVGADLMAGSL 220 (403)
T ss_dssp HHHHHHH-TTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTT--TT--SSS-GGGGT-SEEEEET
T ss_pred HHHHhhc-cCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcce--ec--cccCccccchhheeccc
Confidence 9999998 46899988644 343 234566666666664 789999997211 10 0123444 499999999
Q ss_pred cCCCcC---CceEEEEEeCC---CCCcccCCCcccC
Q 015609 363 HKSLRG---PRGGIIFFRRG---KKPRKQGIPLNHG 392 (403)
Q Consensus 363 HKtL~G---P~GG~I~~~~~---~~~~~~~~p~~qG 392 (403)
-|..+| |.||.|+.+++ ....++..||...
T Consensus 221 IKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~ 256 (403)
T PF06838_consen 221 IKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGK 256 (403)
T ss_dssp TSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGG
T ss_pred eeCCCCCccCcCCEEechHHHHHHHHhhhcCCcccc
Confidence 999876 78999999875 1223445666544
No 163
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.37 E-value=4.1e-11 Score=120.56 Aligned_cols=205 Identities=13% Similarity=0.052 Sum_probs=127.5
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEE-eCCh
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQ-PYSC 226 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~-~~SG 226 (403)
..+.|..+++. .++.+++++...+.+.. .+|+. ..|.. .+.+...+.+.+.+| .+++ +|+ +.++
T Consensus 25 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~la~~~~~~~~~~~~~~----~i~~t~g~ 93 (382)
T PRK06108 25 GVLPLWFGESDLPTPDFIRDAAAAALADGE-TFYTH---NLGIP---ELREALARYVSRLHGVATPPE----RIAVTSSG 93 (382)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCCH---HHHHHHHHHHHHHhCCCcCcc----eEEEeCCh
Confidence 45777766553 37789998877654321 11111 12332 222223345566667 5543 344 4567
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC--CCCCCCHHHHHHHhccCCCcE
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP--QTGYIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~--~~g~ID~d~Le~~i~~~~pkl 304 (403)
++|+..++.+++++||+|++....|.... ..+...| .+++.++++. .+..+|++++++++.. ++++
T Consensus 94 ~~al~~~~~~l~~~gd~vl~~~p~y~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~ 161 (382)
T PRK06108 94 VQALMLAAQALVGPGDEVVAVTPLWPNLV---------AAPKILG--ARVVCVPLDFGGGGWTLDLDRLLAAITP-RTRA 161 (382)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCccchH---------HHHHHCC--CEEEEeeCCCCCCCccCCHHHHHHhcCc-cceE
Confidence 88999999999999999999887764432 1123334 3455555543 2345999999998864 6787
Q ss_pred EEEeCCCC--Cccc---cHHHHHHHHHHcCCEEEEeccccccccc-cccccC--CCC---cccEEEEcCcCCCc--CCce
Q 015609 305 LICGGSSY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIA-AKELAS--PFD---YCDIVTSTTHKSLR--GPRG 371 (403)
Q Consensus 305 Viv~~s~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia-~g~~~~--p~~---~aDivt~StHKtL~--GP~G 371 (403)
|++...++ |... ++++|.++|+++|+++++|.++...... ....+. .+. ...+++.|++|+++ |-+-
T Consensus 162 i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~Ri 241 (382)
T PRK06108 162 LFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRL 241 (382)
T ss_pred EEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccce
Confidence 77654443 4444 5788899999999999999997754432 111111 111 13477899999863 4445
Q ss_pred EEEEEeCC
Q 015609 372 GIIFFRRG 379 (403)
Q Consensus 372 G~I~~~~~ 379 (403)
|+++++++
T Consensus 242 G~~~~~~~ 249 (382)
T PRK06108 242 GWLVAPPA 249 (382)
T ss_pred eeeeCCHH
Confidence 99988653
No 164
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.34 E-value=5.5e-12 Score=136.98 Aligned_cols=163 Identities=20% Similarity=0.223 Sum_probs=111.0
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015609 201 LCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 201 ~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
+|++.+|++||++.. ....++.|.+|.+++.+++++||+||+.+..|.+.+ |+ .+.+.|. ..+++.
T Consensus 178 eAq~~AA~~fgAd~t----yFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~-hg-------aLiLsGa--~PVYl~ 243 (720)
T PRK13578 178 DAQKHAAKVFNADKT----YFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNH-HG-------ALIQAGA--TPVYLE 243 (720)
T ss_pred HHHHHHHHHhCCCce----EEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-HH-------HHHHcCC--eEEEee
Confidence 367789999999984 233344567999999999999999999997654433 32 1334453 233332
Q ss_pred --cCCC--CCCCCHHH-----HHHHhccC--------CC-cEEEEe-CCCCCccccHHHHHHH-HHHcCCEEEEeccccc
Q 015609 281 --VNPQ--TGYIDYEK-----LEEKAMDY--------RP-KILICG-GSSYPREWDYGRFRQI-ADKCGAVLMCDMAHIS 340 (403)
Q Consensus 281 --vd~~--~g~ID~d~-----Le~~i~~~--------~p-klViv~-~s~~g~~~Di~~I~~I-ake~Ga~LivDaAh~~ 340 (403)
.++- -+.|+.+. |+++++++ +| +++++. .+.+|.+.|+++|.++ ++.++ +|++|.||++
T Consensus 244 P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhga 322 (720)
T PRK13578 244 TARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVG 322 (720)
T ss_pred ccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchh
Confidence 2210 13356544 89888765 23 666655 4556999999999998 78888 9999999998
Q ss_pred ccccccc---cc-CCCC-ccc----EEEEcCcCCCcCCce-EEEEEeC
Q 015609 341 GLIAAKE---LA-SPFD-YCD----IVTSTTHKSLRGPRG-GIIFFRR 378 (403)
Q Consensus 341 Glia~g~---~~-~p~~-~aD----ivt~StHKtL~GP~G-G~I~~~~ 378 (403)
-+...+. ++ ..++ .+| +++.|+||+|.+-.. .+|..++
T Consensus 323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~ 370 (720)
T PRK13578 323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKD 370 (720)
T ss_pred hhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCC
Confidence 7644332 11 2233 488 999999999988654 6665544
No 165
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.34 E-value=4.7e-11 Score=121.28 Aligned_cols=205 Identities=17% Similarity=0.158 Sum_probs=125.7
Q ss_pred cccceeccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEE-eCCh
Q 015609 152 KGIELIASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQ-PYSC 226 (403)
Q Consensus 152 ~~l~LiaSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~-~~SG 226 (403)
+.+.|-.+++.. ++.+++++...+.... .+|.. ..|. ..+++...+.+.+.+| .+++ +|+ +.++
T Consensus 34 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~g~---~~lr~~ia~~~~~~~g~~~~~~----~i~~t~G~ 102 (391)
T PRK08361 34 NVISLGIGEPDFDTPKNIKEAAKRALDEGW-THYTP---NAGI---PELREAIAEYYKKFYGVDVDVD----NVIVTAGA 102 (391)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCc---HHHHHHHHHHHHHHhCCCCCcc----cEEEeCCh
Confidence 346666555443 5778888776554321 11100 1222 2333322333333344 3443 344 4456
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccCCCcEE
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~~pklV 305 (403)
++|+.+++.+++++||+|++.+..|.+.. ..+...| .+++.++++++ +..+|++++++.+.. ++++|
T Consensus 103 ~~al~~~~~~l~~~g~~Vlv~~p~y~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v 170 (391)
T PRK08361 103 YEATYLAFESLLEEGDEVIIPDPAFVCYV---------EDAKIAE--AKPIRIPLREENEFQPDPDELLELITK-RTRMI 170 (391)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcccH---------HHHHHcC--CEEEEEecCCccCCCCCHHHHHHhccc-ccEEE
Confidence 88999999999999999999987764432 1223334 45666666644 346999999998875 57877
Q ss_pred EEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CCC-cccEEEEcCcCCCcCC--ceEEEE
Q 015609 306 ICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFD-YCDIVTSTTHKSLRGP--RGGIIF 375 (403)
Q Consensus 306 iv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~-~aDivt~StHKtL~GP--~GG~I~ 375 (403)
++..++ +|..+| +++|.++|+++++++++|.++.-.......... .++ ..++++.|++|+++.| +.|+++
T Consensus 171 ~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~ 250 (391)
T PRK08361 171 VINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVI 250 (391)
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhc
Confidence 766444 467778 788889999999999999997543221111111 111 2568889999987323 248998
Q ss_pred EeCC
Q 015609 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
++++
T Consensus 251 ~~~~ 254 (391)
T PRK08361 251 APEQ 254 (391)
T ss_pred cCHH
Confidence 8653
No 166
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.33 E-value=1.6e-10 Score=117.43 Aligned_cols=204 Identities=14% Similarity=0.075 Sum_probs=127.3
Q ss_pred cccceeccCc--cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC---CCCCcceEEeCC-
Q 015609 152 KGIELIASEN--FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD---SDNWGVNVQPYS- 225 (403)
Q Consensus 152 ~~l~LiaSen--~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~---~~~~~v~V~~~S- 225 (403)
..+.|-.+.+ ..++.+++++...+.+.....|+ ...|.. .+.+..++.+++++|.. +. +|++++
T Consensus 28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~---~~~G~~---~lr~~~~~~l~~~~g~~~~~~~----~i~~t~G 97 (389)
T PRK05957 28 GTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQ---AVQGIP---PLLEAITQKLQQDNGIELNNEQ----AIVVTAG 97 (389)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCC---CCCCCH---HHHHHHHHHHHHHhCCCCCCCC----eEEEeCC
Confidence 4466665544 36788899887765422111111 112332 22223456678888864 32 455554
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEE
Q 015609 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklV 305 (403)
+++++..++.+++++||+|++....+..+.. .+...| ++++.++++ +++.+|++++++++++ ++|+|
T Consensus 98 ~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~---------~~~~~g--~~~~~v~~~-~~~~~d~~~l~~~i~~-~~klv 164 (389)
T PRK05957 98 SNMAFMNAILAITDPGDEIILNTPYYFNHEM---------AITMAG--CQPILVPTD-DNYQLQPEAIEQAITP-KTRAI 164 (389)
T ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH---------HHHhcC--CEEEEeecC-CCCCcCHHHHHHhcCc-CceEE
Confidence 5678888888889999999998876654421 122333 455666665 3567999999998864 68888
Q ss_pred EEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccc-cccCC--C-C-c-ccEEEEcCcCCCc--CCceE
Q 015609 306 ICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAK-ELASP--F-D-Y-CDIVTSTTHKSLR--GPRGG 372 (403)
Q Consensus 306 iv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g-~~~~p--~-~-~-aDivt~StHKtL~--GP~GG 372 (403)
++...+ +|..++ +++|.++|+++|+++++|.++.-- ...+ ....+ + + . --+++.|+.|.++ |-|-|
T Consensus 165 ~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 243 (389)
T PRK05957 165 VTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYF-TYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIG 243 (389)
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhc-cCCCCCccChhhCCCccCcEEEEecchhhccCccceeE
Confidence 776444 456665 888999999999999999996522 2111 11111 1 1 1 2367789999862 33459
Q ss_pred EEEEeCC
Q 015609 373 IIFFRRG 379 (403)
Q Consensus 373 ~I~~~~~ 379 (403)
+++++..
T Consensus 244 ~~~~~~~ 250 (389)
T PRK05957 244 YMVIPIH 250 (389)
T ss_pred EEecCHH
Confidence 9887653
No 167
>PRK08960 hypothetical protein; Provisional
Probab=99.33 E-value=1.4e-10 Score=117.63 Aligned_cols=201 Identities=15% Similarity=0.059 Sum_probs=123.5
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHc----C--CCCCCCcceEE
Q 015609 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF----D--LDSDNWGVNVQ 222 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lf----g--~~~~~~~v~V~ 222 (403)
.+.+.|-.+++. +++.|++++...+.+.. .+|.. ..|.+ + .|+.+++++ | ++++ +|+
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~Y~~---~~g~~---~----lr~~ia~~~~~~~g~~~~~~----~i~ 96 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALAAGH-TRYTA---ARGLP---A----LREAIAGFYAQRYGVDVDPE----RIL 96 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CccCC---CCCCH---H----HHHHHHHHHHHHhCCCCChh----hEE
Confidence 345667665543 58899999988765321 11111 12222 1 233455554 3 4443 455
Q ss_pred eC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccC
Q 015609 223 PY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDY 300 (403)
Q Consensus 223 ~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~ 300 (403)
++ ++++|+..++.++++|||+|++....|.++.. .+...|. +++.++++.+ +..+|++++++++++
T Consensus 97 it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~---------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~- 164 (387)
T PRK08960 97 VTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRH---------FLRLVEG--AAQLVPVGPDSRYQLTPALVERHWNA- 164 (387)
T ss_pred EccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---------HHHhcCC--eEEEEecCcccCCCCCHHHHHHHhCc-
Confidence 55 56789999999999999999999988765531 1233343 4445555543 346999999998875
Q ss_pred CCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCCC-ccc-EEEEcCcCCC--cCCce
Q 015609 301 RPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCD-IVTSTTHKSL--RGPRG 371 (403)
Q Consensus 301 ~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aD-ivt~StHKtL--~GP~G 371 (403)
++++|++...+ +|...+ +++|+++|+++|+++++|.++.- +...+.....+. ..+ +++.|++|.+ .|-|.
T Consensus 165 ~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~-~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRi 243 (387)
T PRK08960 165 DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHG-LTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRL 243 (387)
T ss_pred cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCChhhccCCEEEEeecccccCCcccEE
Confidence 45665554333 456665 55667778999999999998642 322111111111 123 6778999987 34456
Q ss_pred EEEEEeCC
Q 015609 372 GIIFFRRG 379 (403)
Q Consensus 372 G~I~~~~~ 379 (403)
|+++.+++
T Consensus 244 G~~~~~~~ 251 (387)
T PRK08960 244 GWLVAPPA 251 (387)
T ss_pred EEEEcCHH
Confidence 99998754
No 168
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.32 E-value=1.1e-11 Score=128.04 Aligned_cols=156 Identities=17% Similarity=0.161 Sum_probs=112.1
Q ss_pred HHHHHHHHcCCCCCCCcceEEeC-ChHHHHHHHHhhh-ccCCCeEEecCCCCCccccccccCCccchhhh--cccceEEe
Q 015609 202 CFERALKAFDLDSDNWGVNVQPY-SCTSANFAVYTGL-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSA--ASIFFESF 277 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~-SGT~An~aal~al-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~--~g~~~~vv 277 (403)
.++.+++++|++.+ ++.++ +||+++.+++.++ +.+||+|+++...|+.+.. .+.. ...+.+++
T Consensus 117 ~~~~la~l~g~~~~----~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~---------~~~~~~~~~G~~~~ 183 (447)
T PRK00451 117 YQTMICELTGMDVA----NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYRE---------VLKTYLKGQGIEVV 183 (447)
T ss_pred HHHHHHHHhCCCcc----eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHH---------HHHHHHHhCCcEEE
Confidence 45678999999874 45544 5777888888887 4799999998877654421 1121 11234566
Q ss_pred eeecCCCCCCCCHHHHHHHhccCCCcEEEEeC-CCCCccccHHHHHHHHHHcCCEEEE--eccccccccccccccCCCC-
Q 015609 278 PYKVNPQTGYIDYEKLEEKAMDYRPKILICGG-SSYPREWDYGRFRQIADKCGAVLMC--DMAHISGLIAAKELASPFD- 353 (403)
Q Consensus 278 ~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~-s~~g~~~Di~~I~~Iake~Ga~Liv--DaAh~~Glia~g~~~~p~~- 353 (403)
.+++++ + .+|++++++++.+ ++++|++.. +.+|.+.|+++|+++|+++|+++++ |.. ..|.+. .+-+
T Consensus 184 ~v~~~~-~-~~d~~~l~~~i~~-~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~-----~~~~~ 254 (447)
T PRK00451 184 EVPYED-G-VTDLEALEAAVDD-DTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLK-----PPGEY 254 (447)
T ss_pred EecCCC-C-CCCHHHHHHhcCC-CeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCC-----CcccC
Confidence 667765 4 8999999999864 578877654 4467889999999999999999998 543 344331 2222
Q ss_pred cccEEEEcCcCC-----CcCCceEEEEEeCC
Q 015609 354 YCDIVTSTTHKS-----LRGPRGGIIFFRRG 379 (403)
Q Consensus 354 ~aDivt~StHKt-----L~GP~GG~I~~~~~ 379 (403)
.+|++++++||+ ++||+.|+++++++
T Consensus 255 ~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~ 285 (447)
T PRK00451 255 GADIVVGEGQPLGIPLSFGGPYLGFFATRKK 285 (447)
T ss_pred CCCEEEECCCcCCCCCCCCCCCchHHHhhHH
Confidence 489999999996 67887788887664
No 169
>PRK09082 methionine aminotransferase; Validated
Probab=99.31 E-value=8.3e-11 Score=119.38 Aligned_cols=208 Identities=16% Similarity=0.163 Sum_probs=130.1
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-ChHH
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPY-SCTS 228 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~-SGT~ 228 (403)
..++|..+... .++.+++++...+.... .+|+. ..|.. .+.+...+.+.+++|.+... .-+|.++ ++++
T Consensus 31 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~~a~~l~~~~~~~~~~-~~~i~~t~G~~~ 102 (386)
T PRK09082 31 GAINLSQGFPDFDGPPYLVEALAYAMAAGH-NQYPP---MTGVA---ALREAIAAKTARLYGRQYDA-DSEITVTAGATE 102 (386)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC---CCCcH---HHHHHHHHHHHHHhCCCCCC-CCcEEEeCCHHH
Confidence 34666554333 36788888877654321 11211 12332 23333445677778875310 0135554 5688
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe
Q 015609 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~ 308 (403)
|+..++.+++++||+|++....|.++. ..+...| .++++++++++++.+|+++++++++. ++++|++.
T Consensus 103 al~~~~~~~~~~gd~Vli~~p~y~~~~---------~~~~~~g--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~ 170 (386)
T PRK09082 103 ALFAAILALVRPGDEVIVFDPSYDSYA---------PAIELAG--GRAVRVALQPPDFRVDWQRFAAAISP-RTRLIILN 170 (386)
T ss_pred HHHHHHHHHcCCCCEEEEeCCCchhhH---------HHHHHcC--CEEEEEecCcccccCCHHHHHHhcCc-cceEEEEe
Confidence 999999999999999999987765432 1233334 45667777655678999999999864 67888775
Q ss_pred CCCC--Ccc---ccHHHHHHHHHHcCCEEEEeccccccccccccccCC--CC---cccEEEEcCcCCCc--CCceEEEEE
Q 015609 309 GSSY--PRE---WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASP--FD---YCDIVTSTTHKSLR--GPRGGIIFF 376 (403)
Q Consensus 309 ~s~~--g~~---~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p--~~---~aDivt~StHKtL~--GP~GG~I~~ 376 (403)
..++ |.. .++++|.++|+++|+++++|.++.-........+.. +. .-.+++.|+.|+++ |-|.|++++
T Consensus 171 ~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~ 250 (386)
T PRK09082 171 TPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVA 250 (386)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhC
Confidence 4433 433 578899999999999999999975432211111111 11 23477889999873 445599998
Q ss_pred eCC
Q 015609 377 RRG 379 (403)
Q Consensus 377 ~~~ 379 (403)
+++
T Consensus 251 ~~~ 253 (386)
T PRK09082 251 PAA 253 (386)
T ss_pred CHH
Confidence 653
No 170
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.31 E-value=2.2e-10 Score=117.62 Aligned_cols=204 Identities=18% Similarity=0.177 Sum_probs=134.7
Q ss_pred cccceeccCc--cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeC-Ch
Q 015609 152 KGIELIASEN--FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DSDNWGVNVQPY-SC 226 (403)
Q Consensus 152 ~~l~LiaSen--~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~~~~~v~V~~~-SG 226 (403)
+.|+|--++. ..++.+++++...+.+.. ..+. ...|... |-+...+...+.+|. +++ -+|+.+ ++
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~---~~Y~-~~~G~~~---LReaia~~~~~~~~~~~~~~---~eiivt~Ga 98 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGG---THYT-PSAGIPE---LREAIAEKYKRRYGLDVDPE---EEIIVTAGA 98 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhccc---CCCC-CCCCCHH---HHHHHHHHHHHHhCCCCCCC---CeEEEeCCH
Confidence 4677766654 467889999887665421 0111 1234432 222233445566663 332 135555 56
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC--CCCCCCHHHHHHHhccCCCcE
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP--QTGYIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~--~~g~ID~d~Le~~i~~~~pkl 304 (403)
++|+..++.++++|||+|+++++.+..+. ..+.+.|. ++++++++. .+..+|+++|++++.+ ++|+
T Consensus 99 ~~al~~~~~a~~~pGDeVlip~P~Y~~y~---------~~~~~~gg--~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~ 166 (393)
T COG0436 99 KEALFLAFLALLNPGDEVLIPDPGYPSYE---------AAVKLAGG--KPVPVPLDEEENGFKPDLEDLEAAITP-KTKA 166 (393)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCcCHH---------HHHHhcCC--EEEEEeCCcCccCCcCCHHHHHhhcCc-cceE
Confidence 78999999999999999999998765432 12344443 344444432 2578999999999987 8999
Q ss_pred EEEeCCCCC--ccc---cHHHHHHHHHHcCCEEEEecccccccccccc-ccCCCCc-----ccEEEEcCcCCC--cCCce
Q 015609 305 LICGGSSYP--REW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKE-LASPFDY-----CDIVTSTTHKSL--RGPRG 371 (403)
Q Consensus 305 Viv~~s~~g--~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~-~~~p~~~-----aDivt~StHKtL--~GP~G 371 (403)
|++..+++| .+. .+++|.++|+++|+++++|.+ ..+++..+. ..+.+.. .-+++.|+.|++ .|-|-
T Consensus 167 i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEi-Y~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRv 245 (393)
T COG0436 167 IILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEI-YEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRI 245 (393)
T ss_pred EEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehh-hhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccce
Confidence 998876654 444 578889999999999999998 666666552 3333321 236677999986 46667
Q ss_pred EEEEEeC
Q 015609 372 GIIFFRR 378 (403)
Q Consensus 372 G~I~~~~ 378 (403)
|++++++
T Consensus 246 G~~v~~~ 252 (393)
T COG0436 246 GWVVGPP 252 (393)
T ss_pred eEeecCh
Confidence 9999883
No 171
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.30 E-value=1.2e-10 Score=125.05 Aligned_cols=176 Identities=16% Similarity=0.076 Sum_probs=118.9
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc---------CCC-------------------
Q 015609 191 GNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL---------PGD------------------- 242 (403)
Q Consensus 191 G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~---------pGD------------------- 242 (403)
..+...++|+++.+.+++++|.+. .|| +++++||.||..++...-+ .+.
T Consensus 117 ~SP~~t~lE~~vi~~la~l~G~~~-~~G--~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~ 193 (608)
T TIGR03811 117 SSPATSQMEEEVGKEFATLMGYKN-GWG--HIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKE 193 (608)
T ss_pred cCchHHHHHHHHHHHHHHHhCCCC-CCe--EEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccccc
Confidence 445667899999999999999986 576 4567899999987654311 000
Q ss_pred ------------------------------eEEecCCCCCccccccccCCccchhhhcccce-EEeeeecCCCCCCCCHH
Q 015609 243 ------------------------------RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFF-ESFPYKVNPQTGYIDYE 291 (403)
Q Consensus 243 ------------------------------~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~-~vv~~~vd~~~g~ID~d 291 (403)
+|+++.. +|.| + .|.+.+.|.+. .++.+++|. ++.+|++
T Consensus 194 ~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~---aHyS---~---~KAa~ilGlG~~~vv~VpvD~-~~rmd~~ 263 (608)
T TIGR03811 194 IMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQT---KHYS---W---LKAADIIGIGLDQVIPVPVDS-NYRMDIN 263 (608)
T ss_pred ccccccccccchhhhhhhccccccccccceEEEECCC---ccHH---H---HHHHHHcCCCcccEEEeecCC-CCcCCHH
Confidence 3444432 2332 1 14556667642 456677774 6899999
Q ss_pred HHHHHhccC----CCc-EEE--EeCCCCCccccHHHHHHHH---HHcCC--EEEEeccccccc---cccc----------
Q 015609 292 KLEEKAMDY----RPK-ILI--CGGSSYPREWDYGRFRQIA---DKCGA--VLMCDMAHISGL---IAAK---------- 346 (403)
Q Consensus 292 ~Le~~i~~~----~pk-lVi--v~~s~~g~~~Di~~I~~Ia---ke~Ga--~LivDaAh~~Gl---ia~g---------- 346 (403)
+|++.|++. .|- .|| ++.+..|.+-|+++|++|| +++|+ ++|||+|.+.-. +...
T Consensus 264 ~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~ 343 (608)
T TIGR03811 264 ELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDL 343 (608)
T ss_pred HHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchh
Confidence 999988642 232 232 3456778999999999999 66888 699999966422 1100
Q ss_pred --------cc--------------cCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 347 --------EL--------------ASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 347 --------~~--------------~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+ -..++.||.++..+||+++-|.+ |++++++.
T Consensus 344 ~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~ 399 (608)
T TIGR03811 344 QEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI 399 (608)
T ss_pred hcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH
Confidence 00 00134699999999999988886 88888875
No 172
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.30 E-value=9.9e-11 Score=117.33 Aligned_cols=198 Identities=14% Similarity=0.107 Sum_probs=129.3
Q ss_pred ccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCh-HHH
Q 015609 153 GIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSC-TSA 229 (403)
Q Consensus 153 ~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SG-T~A 229 (403)
.+.|-.+++. +++.+++++...+..... .+|. .. .. + ..|+.++++++++++ +|.+++| +++
T Consensus 24 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~-----~~y~-~~-~~---~-~lr~~ia~~~~~~~~----~i~it~G~~~~ 88 (351)
T PRK14807 24 KYKMDANETPFELPEEVIKNIQEIVKSSQV-----NIYP-DP-TA---E-KLREELARYCSVVPT----NIFVGNGSDEI 88 (351)
T ss_pred eeEccCCCCCCCCCHHHHHHHHHHhhcCcc-----cCCC-Cc-cH---H-HHHHHHHHHhCCCcc----cEEEecCHHHH
Confidence 3556555554 478999998765532111 1121 11 11 2 246678899998864 4666655 567
Q ss_pred HHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015609 230 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 230 n~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
+..++.+++++||+|++....+.... ......| .+++++++++ ++.+|++++++++...++|+|++..
T Consensus 89 l~~~~~~l~~~gd~Vlv~~p~y~~~~---------~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~~~~~~~k~v~l~~ 156 (351)
T PRK14807 89 IHLIMLAFINKGDVVIYPHPSFAMYS---------VYSKIAG--AVEIPVKLKE-DYTYDVGSFIKVIEKYQPKLVFLCN 156 (351)
T ss_pred HHHHHHHhcCCCCEEEEeCCChHHHH---------HHHHHcC--CeEEEeecCC-CCCCCHHHHHHHhhccCCCEEEEeC
Confidence 88888999999999999877654321 1122333 4556666653 4679999999999766789887764
Q ss_pred CC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-c-ccEEEEcCcCCC--cCCceEEEEEeCC
Q 015609 310 SS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-Y-CDIVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 310 s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~-aDivt~StHKtL--~GP~GG~I~~~~~ 379 (403)
.+ +|...+.+++.++|++++.++++|.++. .+. .......++ . --+++.|++|++ .|-|-|+++.+++
T Consensus 157 p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~-~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~ 230 (351)
T PRK14807 157 PNNPTGSVIEREDIIKIIEKSRGIVVVDEAYF-EFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANEN 230 (351)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCEEEEeCcch-hhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHH
Confidence 44 4678999999999999899999999984 222 111111111 1 237788999987 3445599987653
No 173
>PRK07324 transaminase; Validated
Probab=99.27 E-value=8e-11 Score=119.27 Aligned_cols=159 Identities=19% Similarity=0.217 Sum_probs=107.3
Q ss_pred HHHHHHHcC-CCCCCCcceEEeC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015609 203 FERALKAFD-LDSDNWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 203 rerla~lfg-~~~~~~~v~V~~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
|+.++++++ .+++ +|+++ ++++|+.+++.+++++||+|++....+..+. ..+...| .+++.++
T Consensus 68 r~~ia~~~~~~~~~----~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~---------~~~~~~g--~~v~~v~ 132 (373)
T PRK07324 68 KEAVASLYQNVKPE----NILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLY---------DIPESLG--AEVDYWQ 132 (373)
T ss_pred HHHHHHHhcCCChh----hEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHH---------HHHHHcC--CEEEEEe
Confidence 556777774 4553 35444 5678999999999999999999876553321 1123334 3556666
Q ss_pred cCCCCC-CCCHHHHHHHhccCCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCCCc
Q 015609 281 VNPQTG-YIDYEKLEEKAMDYRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDY 354 (403)
Q Consensus 281 vd~~~g-~ID~d~Le~~i~~~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~ 354 (403)
++++++ .+|++++++++.. ++|+|++...++ |...+ +++|+++|+++|+++++|.++ .++...+..+...+.
T Consensus 133 ~~~~~~~~~d~~~l~~~~~~-~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y-~~l~~~~~~~s~~~~ 210 (373)
T PRK07324 133 LKEENGWLPDLDELRRLVRP-NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVY-RPLDEDGSTPSIADL 210 (373)
T ss_pred cccccCCCCCHHHHHHhCCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccc-cccccCCCCCChhhc
Confidence 654443 5899999988764 689888765444 56777 888999999999999999985 334332212211111
Q ss_pred --ccEEEEcCcCCCc--CCceEEEEEeC
Q 015609 355 --CDIVTSTTHKSLR--GPRGGIIFFRR 378 (403)
Q Consensus 355 --aDivt~StHKtL~--GP~GG~I~~~~ 378 (403)
-.+++.|+.|+++ |.|-|++++++
T Consensus 211 ~~~~I~~~s~SK~~~~~G~RiG~i~~~~ 238 (373)
T PRK07324 211 YEKGISTNSMSKTYSLPGIRVGWIAANE 238 (373)
T ss_pred cCCEEEEecchhhcCCccceeEEEecCH
Confidence 2377789999864 55559998854
No 174
>PRK07550 hypothetical protein; Provisional
Probab=99.27 E-value=8.3e-10 Score=111.85 Aligned_cols=205 Identities=13% Similarity=0.046 Sum_probs=124.9
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCh-
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DSDNWGVNVQPYSC- 226 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~~~~~v~V~~~SG- 226 (403)
..+.|-.++.. .++.+.+++...+.......|. ...|.+ ++.+...+++.+.+|. +++ +|++++|
T Consensus 30 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~---~~~G~~---~lr~~ia~~~~~~~g~~~~~~----~i~~t~G~ 99 (386)
T PRK07550 30 PLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYG---PVEGLP---ELREAYAAHYSRLYGAAISPE----QVHITSGC 99 (386)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCC---CCCCCH---HHHHHHHHHHHHHhCCCCCcc----eEEEecCc
Confidence 34666555433 3667788877655321100110 112332 3333334455555564 332 4666655
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccCCCcEE
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~~pklV 305 (403)
++|+..++.+++++||+|++....+.++.. .+...| .++++++.+++ +..+|++++++++++ ++++|
T Consensus 100 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---------~~~~~g--~~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v 167 (386)
T PRK07550 100 NQAFWAAMVTLAGAGDEVILPLPWYFNHKM---------WLDMLG--IRPVYLPCDEGPGLLPDPAAAEALITP-RTRAI 167 (386)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHH---------HHHhcC--CEEEEEecCCCcCCCCCHHHHHHHhcc-cCcEE
Confidence 679999999999999999999877654421 123333 45666677643 456899999999875 57776
Q ss_pred EEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEecccccccccccccc-CCCC----c-ccEEEEcCcCCCc--CCceE
Q 015609 306 ICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELA-SPFD----Y-CDIVTSTTHKSLR--GPRGG 372 (403)
Q Consensus 306 iv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~-~p~~----~-aDivt~StHKtL~--GP~GG 372 (403)
++..+++ |...+ +++|.++|+++|+++++|.++.- +...+..+ ..+. . -.+++.|++|+++ |-+.|
T Consensus 168 ~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG 246 (386)
T PRK07550 168 ALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRD-FDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVG 246 (386)
T ss_pred EEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchh-hccCCCCCcchhhCCCccccEEEEecchhhccCcccceE
Confidence 6554444 44454 78999999999999999998653 22111111 1111 1 1356889999884 55679
Q ss_pred EEEEeCC
Q 015609 373 IIFFRRG 379 (403)
Q Consensus 373 ~I~~~~~ 379 (403)
++++++.
T Consensus 247 ~i~~~~~ 253 (386)
T PRK07550 247 AVVASPA 253 (386)
T ss_pred eeecCHH
Confidence 9998653
No 175
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.26 E-value=6.5e-10 Score=113.14 Aligned_cols=205 Identities=19% Similarity=0.158 Sum_probs=123.1
Q ss_pred ccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC--CCCCcceEEe-CChH
Q 015609 153 GIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD--SDNWGVNVQP-YSCT 227 (403)
Q Consensus 153 ~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~--~~~~~v~V~~-~SGT 227 (403)
-|.|-.+++. .++.+.+++...+...+. .|+. ..|. .++.+...+.+...+|.. +. -+|++ .+++
T Consensus 32 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~---~~g~---~~lr~~ia~~~~~~~~~~~~~~---~~i~it~G~~ 101 (391)
T PRK07309 32 ILKLTLGEPDFTTPDHVKEAAKRAIDANQS-HYTG---MAGL---LELRQAAADFVKEKYNLDYAPE---NEILVTIGAT 101 (391)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-CCCC---CCCc---HHHHHHHHHHHHHHhCCCCCCC---CcEEEeCChH
Confidence 3555443333 266778887765543211 1111 1122 334333333444444542 11 13444 4568
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC--CCcEE
Q 015609 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY--RPKIL 305 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~--~pklV 305 (403)
+|+.+++.+++++||+|++....|.++.. .+...| .+++.+++++.+..+|+++|+++++.. ++++|
T Consensus 102 ~al~~~~~~~~~~gd~vl~~~p~y~~~~~---------~~~~~g--~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i 170 (391)
T PRK07309 102 EALSASLTAILEPGDKVLLPAPAYPGYEP---------IVNLVG--AEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAV 170 (391)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCCcchHH---------HHHHcC--CEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEE
Confidence 89999999999999999998877655421 223344 345666665444579999999998653 46888
Q ss_pred EEeCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccccccccCCCC----cccEEEEcCcCCC--cCCceEEE
Q 015609 306 ICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD----YCDIVTSTTHKSL--RGPRGGII 374 (403)
Q Consensus 306 iv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~----~aDivt~StHKtL--~GP~GG~I 374 (403)
++..++ +|... ++++|.++|+++++++++|.++.-- ...+....++. .--+++.|++|++ .|-+-|++
T Consensus 171 ~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~ 249 (391)
T PRK07309 171 ILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSEL-TYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLI 249 (391)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccce-eeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEE
Confidence 776433 35554 4888899999999999999997642 22111111111 1127788999987 34445999
Q ss_pred EEeCC
Q 015609 375 FFRRG 379 (403)
Q Consensus 375 ~~~~~ 379 (403)
+.+++
T Consensus 250 v~~~~ 254 (391)
T PRK07309 250 FAPAE 254 (391)
T ss_pred EeCHH
Confidence 98764
No 176
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.26 E-value=1.3e-11 Score=120.05 Aligned_cols=187 Identities=20% Similarity=0.229 Sum_probs=130.5
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-cCCC
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL-LPGD 242 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all-~pGD 242 (403)
..+++++|... .-|..-|+-.+...+||+ ++|++||.+. .++.+|||.+|+++++.-+ +||.
T Consensus 35 TdeMr~am~eA--------~vgDdVyGeD~tt~rLE~----~vA~l~GKEA-----gLFv~SGTmgNllaIm~Hc~~rg~ 97 (384)
T KOG1368|consen 35 TDEMRRAMAEA--------SVGDDVYGEDPTTNRLEQ----RVAELFGKEA-----GLFVPSGTMGNLLAIMVHCHQRGS 97 (384)
T ss_pred hHHHHHHHhhc--------ccCcccccCCccHHHHHH----HHHHHhCccc-----eeeecccccccHHHHHHHhcCCCc
Confidence 55677777643 223334444456677886 4899999887 4778899999999998876 5999
Q ss_pred eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCC-------CcEEEEeCC-C-CC
Q 015609 243 RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYR-------PKILICGGS-S-YP 313 (403)
Q Consensus 243 ~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~-------pklViv~~s-~-~g 313 (403)
.||+-+.. |+ |. ++.|.-..+.| +.+.++... +++.+|++++|+.+...+ ++||+++.+ + .|
T Consensus 98 eii~gd~~---HI-~~--~E~gg~s~l~g--v~~~tv~~e-~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~G 168 (384)
T KOG1368|consen 98 EIIVGDRA---HI-HR--YEQGGISQLAG--VHVRTVKNE-NDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCG 168 (384)
T ss_pred eEEeccch---he-ee--hhccChhhhcc--ceeEeeeeC-CCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccC
Confidence 99987754 32 22 22221112233 344555544 478999999999997432 488888754 3 34
Q ss_pred -ccccHH---HHHHHHHHcCCEEEEecccccccc-ccccccCCCC----cccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 314 -REWDYG---RFRQIADKCGAVLMCDMAHISGLI-AAKELASPFD----YCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 314 -~~~Di~---~I~~Iake~Ga~LivDaAh~~Gli-a~g~~~~p~~----~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
.+.|++ +|.++|+++|+.|++|+|-..-.. +.|+ |+. ++|.|.....|.|+.|-|.+|+.++.
T Consensus 169 g~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV---~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k~ 240 (384)
T KOG1368|consen 169 GKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGV---PVKKICSAFDSVSICLSKGLGAPVGSVIVGSKD 240 (384)
T ss_pred ceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCC---CHHHHHHhhhhhhhhhhccCCCCcccEEEccHH
Confidence 677765 567889999999999999775442 2222 332 48999999999999999999999875
No 177
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.25 E-value=3.4e-11 Score=122.81 Aligned_cols=192 Identities=14% Similarity=0.154 Sum_probs=125.5
Q ss_pred ceeccCccCcHH-HHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHH
Q 015609 155 ELIASENFVCRA-VMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAV 233 (403)
Q Consensus 155 ~LiaSen~~~p~-V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aa 233 (403)
.+.+++..+.|. ..+++.+.+ ..+.+.+.++.+.+. .+++.++++|+++.. |.+.++..|||.++.++
T Consensus 6 ~f~~gp~~~~~~~~~~~~~~~~---------~~~~HRs~~F~~i~~-e~~~~L~~l~~~~~~-~~v~~l~GsGT~a~Eaa 74 (374)
T TIGR01365 6 CFSSGPCAKRPGWSIEELKNAP---------LGRSHRSKLGKEKLA-EAIKKTREMLGVPAD-YLIGIVPASDTGAVEMA 74 (374)
T ss_pred CcCCCccCCCchhhHHHHhhhh---------cccCcCCHHHHHHHH-HHHHHHHHHhCCCCC-cEEEEECCchHHHHHHH
Confidence 356778888888 555554321 223344556665554 478999999998532 33545567899999999
Q ss_pred Hhhhc-cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE-eCCC
Q 015609 234 YTGLL-LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC-GGSS 311 (403)
Q Consensus 234 l~all-~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv-~~s~ 311 (403)
+.+++ ++||+|++. |.++..+.. ..+...|.. ++..+..+ .+..+|+++++. + ..+.++ +.++
T Consensus 75 ~~nl~~~~g~~vLv~-----g~FG~r~~~---eia~~~g~~-~v~~l~~~-~g~~~~~~~ve~--~---~~v~~vhnETS 139 (374)
T TIGR01365 75 LWSMLGCRGVDVLAW-----ESFGKGWVT---DVTKQLKLP-DVRVLEAE-YGKLPDLKKVDF--K---NDVVFTWNGTT 139 (374)
T ss_pred HHHcCCCCCCeEEEE-----CHHHHHHHH---HHHHhcCCC-CcEEEcCC-CCCCCCHHHcCC--C---CCEEEecCCCc
Confidence 99999 589999874 234332110 111223432 12333343 356799999972 1 234433 4567
Q ss_pred CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 312 YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 312 ~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+|...|+++|...+ ++++++||++-++|..+ .+++.+|+++++.+|+|.+|.| ++++.++.
T Consensus 140 TGv~npv~~i~~~~--~~~lliVDavSs~g~~~-----l~~d~iDv~~tgsQK~L~~ppGls~v~vs~~ 201 (374)
T TIGR01365 140 SGVRVPNGDFIPAD--REGLTICDATSAAFAQD-----LDYHKLDVVTFSWQKVLGGEGAHGMLILSPR 201 (374)
T ss_pred hheecccccccccc--CCCcEEEEccchhcCCC-----CChhHCcEEEEechhccCCCCceEEEEECHH
Confidence 88899987665332 48999999998887643 3344599999999999999999 67776653
No 178
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.25 E-value=2.2e-10 Score=110.42 Aligned_cols=202 Identities=19% Similarity=0.217 Sum_probs=128.1
Q ss_pred HhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCC-------CCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcce
Q 015609 148 QRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYP-------GARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVN 220 (403)
Q Consensus 148 ~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~p-------gsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~ 220 (403)
.|..-.++=|---..+++++++|+..+ +.||. |+...--.+.+..+- +.+++++|++.
T Consensus 14 ~r~~iNv~PiQrGGiLt~eArkal~E~-----gDGYSvCD~C~~Grldei~kPpI~~F~----~dlaeFlg~D~------ 78 (382)
T COG1103 14 TRGFINVNPIQRGGILTEEARKALLEW-----GDGYSVCDFCLEGRLDEITKPPIKDFL----EDLAEFLGMDE------ 78 (382)
T ss_pred hcCccccChhhccCcCCHHHHHHHHHh-----cCCcchhhhhccCccccccCCcHHHHH----HHHHHHhCCce------
Confidence 344433333444566799999998753 33432 222222223333332 23889999986
Q ss_pred EEeCC-hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec-CCCCCCCCHHHHHHHhc
Q 015609 221 VQPYS-CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV-NPQTGYIDYEKLEEKAM 298 (403)
Q Consensus 221 V~~~S-GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v-d~~~g~ID~d~Le~~i~ 298 (403)
+.++. +-+|-++++.++.++||.|++..+.| .+. |+ .....|. ++..++- .--...|+++...+.|.
T Consensus 79 ~R~t~GARe~KfavMhal~~~gd~vV~D~~aH---Ytt-yv-----AAEragl--~v~eVp~tg~Pey~i~~e~y~~vie 147 (382)
T COG1103 79 VRVTAGAREAKFAVMHALCKEGDWVVVDSLAH---YTT-YV-----AAERAGL--NVAEVPNTGYPEYKITPEGYAEVIE 147 (382)
T ss_pred eeecccchhhHHHHHHHhccCCCEEEEcCcch---HHH-HH-----HHHhcCC--eEEecCCCCCCceEecHHHHHHHHH
Confidence 45554 56899999999999999999887654 321 11 1223343 3333321 00124577777666664
Q ss_pred c------CCCcEEEEeC--CCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCc--C
Q 015609 299 D------YRPKILICGG--SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLR--G 368 (403)
Q Consensus 299 ~------~~pklViv~~--s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~--G 368 (403)
+ ..|.+.++.. .+||...|.++|++||+++|+++++.+|-..|-++...... .+||+++|+||++. |
T Consensus 148 e~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~---g~DFiVgSGHKsmAAs~ 224 (382)
T COG1103 148 EVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEI---GADFIVGSGHKSMAASA 224 (382)
T ss_pred HHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeecccccccccc---CCCEEEecCccchhccC
Confidence 3 1256665543 47999999999999999999999999999998765322111 49999999999984 3
Q ss_pred CceEEEEEeCC
Q 015609 369 PRGGIIFFRRG 379 (403)
Q Consensus 369 P~GG~I~~~~~ 379 (403)
| .|++..+.+
T Consensus 225 P-iGvl~~~eE 234 (382)
T COG1103 225 P-IGVLAMSEE 234 (382)
T ss_pred C-eeEEeehhH
Confidence 4 366666554
No 179
>PRK07337 aminotransferase; Validated
Probab=99.25 E-value=4.7e-10 Score=113.74 Aligned_cols=205 Identities=16% Similarity=0.114 Sum_probs=122.7
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeC-C
Q 015609 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DSDNWGVNVQPY-S 225 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~~~~~v~V~~~-S 225 (403)
...+.|-.+++. .++.+.+++...+.+.. ..|+. ..|. ..+.+...+.+...+|. +++ +|+.+ +
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~g~---~~lr~~ia~~~~~~~~~~~~~~----~i~~t~G 98 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALRRGV-TQYTS---ALGL---APLREAIAAWYARRFGLDVAPE----RIVVTAG 98 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCC---HHHHHHHHHHHHHHhCCCCChH----hEEEecC
Confidence 445666655543 47788888877664321 11211 1122 22222212233333453 443 34444 5
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccCCCcE
Q 015609 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~~pkl 304 (403)
+++|+..++.+++++||+|++....|.+... .+...+ .+++.++++.+ ++.+|++++++++.. ++++
T Consensus 99 ~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---------~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 166 (388)
T PRK07337 99 ASAALLLACLALVERGDEVLMPDPSYPCNRH---------FVAAAE--GRPVLVPSGPAERFQLTAADVEAAWGE-RTRG 166 (388)
T ss_pred cHHHHHHHHHHhcCCCCEEEEeCCCchhhHH---------HHHHcC--CEEEEeecCCccCCcCCHHHHHhhcCc-cceE
Confidence 6789999999999999999999888755421 122333 34555666542 457999999998864 5677
Q ss_pred EEEeCCCC--Cccc---cHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccE-EEEcCcCCCc--CCceEEEE
Q 015609 305 LICGGSSY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDI-VTSTTHKSLR--GPRGGIIF 375 (403)
Q Consensus 305 Viv~~s~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDi-vt~StHKtL~--GP~GG~I~ 375 (403)
|++...++ |... ++++|.++|+++|+++++|.+.. ++...+.....+. ..++ ++.|++|.++ |.+.|+++
T Consensus 167 v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~ 245 (388)
T PRK07337 167 VLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQ-GLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLV 245 (388)
T ss_pred EEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEecccc-ccccCCCCcChhhccCCEEEEEechhhcCCchhheeeee
Confidence 76654443 4444 57888899999999999999854 2322211111112 2344 4679999873 56679999
Q ss_pred EeCC
Q 015609 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
.++.
T Consensus 246 ~~~~ 249 (388)
T PRK07337 246 VPEA 249 (388)
T ss_pred cCHH
Confidence 8653
No 180
>PRK07777 aminotransferase; Validated
Probab=99.25 E-value=6.7e-10 Score=112.55 Aligned_cols=206 Identities=16% Similarity=0.160 Sum_probs=122.2
Q ss_pred cccceeccC--ccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCC-CCcceEE-eCChH
Q 015609 152 KGIELIASE--NFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSD-NWGVNVQ-PYSCT 227 (403)
Q Consensus 152 ~~l~LiaSe--n~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~-~~~v~V~-~~SGT 227 (403)
..++|-.+. ...++.+++++...+.... ..|+. ..|. .++.+...+.+.+.+|.+.. ++ +|+ +.+++
T Consensus 25 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~g~---~~lr~~ia~~~~~~~g~~~~~~~--~i~~t~G~~ 95 (387)
T PRK07777 25 GAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-NQYPP---GPGI---PELRAAIAAQRRRRYGLEYDPDT--EVLVTVGAT 95 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCC---HHHHHHHHHHHHHHhCCCCCCCC--cEEEeCCcH
Confidence 456665432 1235666776665543221 11111 1122 23333333445556776521 11 244 44578
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC--CCCCCHHHHHHHhccCCCcEE
Q 015609 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ--TGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~--~g~ID~d~Le~~i~~~~pklV 305 (403)
+|+.+++.+++++||+|++....|.+.. ..+...|. .+++++++++ ++.+|++++++++.+ ++++|
T Consensus 96 ~al~~~~~~~~~~gd~vli~~p~y~~~~---------~~~~~~g~--~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v 163 (387)
T PRK07777 96 EAIAAAVLGLVEPGDEVLLIEPYYDSYA---------AVIAMAGA--HRVPVPLVPDGRGFALDLDALRAAVTP-RTRAL 163 (387)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhhH---------HHHHHCCC--EEEEeecCCccCCCcCCHHHHHHhcCc-ccEEE
Confidence 8999999999999999999887654331 12233443 4455555543 346999999998864 67888
Q ss_pred EEeCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccccccccCC------CCcccEEEEcCcCCCc--CCceE
Q 015609 306 ICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASP------FDYCDIVTSTTHKSLR--GPRGG 372 (403)
Q Consensus 306 iv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p------~~~aDivt~StHKtL~--GP~GG 372 (403)
++...+ +|... ++++|.++|+++++++++|.++.-- ...+....+ ....++++.|++|+|+ |-+-|
T Consensus 164 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 242 (387)
T PRK07777 164 IVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHL-VFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIG 242 (387)
T ss_pred EEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhc-ccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeE
Confidence 776443 35444 5888999999999999999987532 211110011 1125688999999874 33448
Q ss_pred EEEEeCC
Q 015609 373 IIFFRRG 379 (403)
Q Consensus 373 ~I~~~~~ 379 (403)
+++.+++
T Consensus 243 ~~~~~~~ 249 (387)
T PRK07777 243 WACGPAP 249 (387)
T ss_pred EEecCHH
Confidence 8887653
No 181
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.24 E-value=1e-09 Score=111.72 Aligned_cols=146 Identities=17% Similarity=0.181 Sum_probs=99.4
Q ss_pred EEeC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHHHHHHHhc
Q 015609 221 VQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYEKLEEKAM 298 (403)
Q Consensus 221 V~~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d~Le~~i~ 298 (403)
|+++ ++++|+..++.++++|||+|++....|.++.. .+...| .++++++++.++ ..+|++++++.+.
T Consensus 100 i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~---------~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~~~ 168 (394)
T PRK05942 100 ALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFR---------GPLIAG--AQIYPIILKPENDWLIDLSSIPEEVA 168 (394)
T ss_pred EEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHHcC--CEEEEeecCCccCCccCHHHHHHhcc
Confidence 5544 56789999999999999999999988766431 122333 456666665433 4699999999886
Q ss_pred cCCCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCC---CC---cccEEEEcCcCCC-
Q 015609 299 DYRPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASP---FD---YCDIVTSTTHKSL- 366 (403)
Q Consensus 299 ~~~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p---~~---~aDivt~StHKtL- 366 (403)
+ ++|+|++..++ +|...+ +++|.++|+++|+++++|.++.-... .+....+ ++ ...+++.|+.|.+
T Consensus 169 ~-~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~-~~~~~~~~~~~~~~~~~~i~~~SfSK~~~ 246 (394)
T PRK05942 169 Q-QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAF-DGYQPTSLLEIPGAKDIGVEFHTLSKTYN 246 (394)
T ss_pred c-cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhcc-CCCCCCChhhCCCccccEEEEecchhccC
Confidence 4 78988876444 456665 77888899999999999999753321 1110011 11 2346778999976
Q ss_pred -cCCceEEEEEeCC
Q 015609 367 -RGPRGGIIFFRRG 379 (403)
Q Consensus 367 -~GP~GG~I~~~~~ 379 (403)
.|-+.|+++.+++
T Consensus 247 ~~GlRiG~i~~~~~ 260 (394)
T PRK05942 247 MAGWRVGFVVGNRH 260 (394)
T ss_pred ChhhheeeeecCHH
Confidence 3334599987654
No 182
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.23 E-value=9.6e-10 Score=112.10 Aligned_cols=203 Identities=19% Similarity=0.174 Sum_probs=124.0
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHc----C--CCCCCCcceEE
Q 015609 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF----D--LDSDNWGVNVQ 222 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lf----g--~~~~~~~v~V~ 222 (403)
...+.|-.+++. .++.+++++...+......+++ ..|... .|+.+++++ | +++++ +|+
T Consensus 32 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~----~~G~~~-------lr~aia~~~~~~~g~~~~~~~---~I~ 97 (399)
T PRK07681 32 HKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT----LSGIQE-------FHEAVTEYYNNTHNVILNADK---EVL 97 (399)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC----CCCcHH-------HHHHHHHHHHHHhCCCCCCCC---eEE
Confidence 344666555443 4778888887665421111221 123321 233344443 3 34311 455
Q ss_pred eCC-hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHHHHHHHhccC
Q 015609 223 PYS-CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYEKLEEKAMDY 300 (403)
Q Consensus 223 ~~S-GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d~Le~~i~~~ 300 (403)
+++ +++|+..++.+++++||+|++..+.|.+... .+...| .+++++++++++ ..+|++++++.+..
T Consensus 98 it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~---------~~~~~G--~~~~~v~~~~~~~~~~d~~~l~~~~~~- 165 (399)
T PRK07681 98 LLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYET---------GIQMAG--ATSYYMPLKKENDFLPDLELIPEEIAD- 165 (399)
T ss_pred ECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHH---------HHHhcC--CEEEEEecCCCCCCcCCHHHHHHhccc-
Confidence 555 5678989999999999999999887654321 123334 456677776543 46899999888753
Q ss_pred CCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CCC---cccEEEEcCcCCC--cC
Q 015609 301 RPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFD---YCDIVTSTTHKSL--RG 368 (403)
Q Consensus 301 ~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~---~aDivt~StHKtL--~G 368 (403)
++|+|++..+++ |.+.+ +++|.++|+++|+++++|.++.--......... .++ .-.+++.|++|++ .|
T Consensus 166 ~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 245 (399)
T PRK07681 166 KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAG 245 (399)
T ss_pred cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCcc
Confidence 688888774444 56666 677888899999999999997632211111111 111 1347788999987 34
Q ss_pred CceEEEEEeCC
Q 015609 369 PRGGIIFFRRG 379 (403)
Q Consensus 369 P~GG~I~~~~~ 379 (403)
-|-|+++.+++
T Consensus 246 lRiG~~i~~~~ 256 (399)
T PRK07681 246 SRIGYMIGNEE 256 (399)
T ss_pred ceeEEEecCHH
Confidence 45699987653
No 183
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.23 E-value=5.9e-11 Score=128.90 Aligned_cols=160 Identities=13% Similarity=0.058 Sum_probs=109.0
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015609 201 LCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 201 ~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
+|++.+|++||++.. ....++.|.+|.+++.+++++||+|++.+..|.+.+ |+ +.+.|. ..+++.
T Consensus 199 eAe~~AA~~fgAd~t----yfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~-ha--------Lilsga--~PVYl~ 263 (714)
T PRK15400 199 EAEEYIARVFNADRS----YMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLT-HL--------MMMSDV--TPIYFR 263 (714)
T ss_pred HHHHHHHHHhCCCcE----EEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHH-HH--------HHHcCC--eEEEec
Confidence 367789999999984 233334467999999999999999999997654433 22 344553 333332
Q ss_pred cCC-CC---CCCC-----HHHHHHHhccC----CCcEEEE-eCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccc
Q 015609 281 VNP-QT---GYID-----YEKLEEKAMDY----RPKILIC-GGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAK 346 (403)
Q Consensus 281 vd~-~~---g~ID-----~d~Le~~i~~~----~pklViv-~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g 346 (403)
... .. +.|+ .+.++++++++ +|+.+++ .++.+|.+.|++.|.++|+.++ +++|.||++-....+
T Consensus 264 P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p 341 (714)
T PRK15400 264 PTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSP 341 (714)
T ss_pred ccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCc
Confidence 211 11 2355 89999999764 2324444 4556699999999999999887 799999998764433
Q ss_pred ccc--CCCC-cc---c--EEEEcCcCCCcCCce-EEEEEe
Q 015609 347 ELA--SPFD-YC---D--IVTSTTHKSLRGPRG-GIIFFR 377 (403)
Q Consensus 347 ~~~--~p~~-~a---D--ivt~StHKtL~GP~G-G~I~~~ 377 (403)
.++ .++. .+ | +++.|+||+|.|... .+|..+
T Consensus 342 ~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvk 381 (714)
T PRK15400 342 IYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVK 381 (714)
T ss_pred ccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHc
Confidence 332 3332 35 5 999999999988654 555443
No 184
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.23 E-value=1.3e-10 Score=116.13 Aligned_cols=196 Identities=16% Similarity=0.099 Sum_probs=125.1
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CChH-
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQP-YSCT- 227 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~-~SGT- 227 (403)
.-|+|-.++|+ .+|.+++++...+.... +|+.. . .. ..|+.+++++|++++ +|++ ++|+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~--~y~~~------~-~~----~lr~~ia~~~~~~~~----~i~~~~~Ga~ 97 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSKIH--RYPEP------D-AP----ELREALSKYTGVPVE----NIIVGGDGMD 97 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHhhc--CCCCC------C-HH----HHHHHHHHHhCCCHH----HEEEeCCCHH
Confidence 34666656565 46788888876554211 22221 1 12 246678899998874 4555 5664
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE
Q 015609 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv 307 (403)
+++..++.+++++||+|++....+..+. ......| .+++.++.+ .++.+|++++++.+.. ++++|++
T Consensus 98 ~~i~~~~~~~~~~gd~vlv~~p~y~~~~---------~~~~~~g--~~~~~~~~~-~~~~~~~~~l~~~~~~-~~~~v~~ 164 (361)
T PRK00950 98 EVIDTLMRTFIDPGDEVIIPTPTFSYYE---------ISAKAHG--AKPVYAKRE-EDFSLDVDSVLNAITE-KTKVIFL 164 (361)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHH---------HHHHHcC--CEEEEeecC-CCCCcCHHHHHHHhcc-CCCEEEE
Confidence 5778888888899999999886543221 1122334 345555544 2457999999998864 6788776
Q ss_pred eCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCccc--EEEEcCcCCCc--CCceEEEEEeCC
Q 015609 308 GGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCD--IVTSTTHKSLR--GPRGGIIFFRRG 379 (403)
Q Consensus 308 ~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aD--ivt~StHKtL~--GP~GG~I~~~~~ 379 (403)
...+ +|...+.++|.++|+++|+++++|++|.- +.... ....++..| +++.|+.|.++ |-+-|++++++.
T Consensus 165 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~-~~~~~-~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~ 240 (361)
T PRK00950 165 CTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVE-FAEYD-YTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEW 240 (361)
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhh-hCccc-hHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHH
Confidence 5433 57889999999999999999999999853 22111 100011122 66789999874 223488887653
No 185
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.23 E-value=8.1e-11 Score=127.86 Aligned_cols=160 Identities=15% Similarity=0.055 Sum_probs=107.3
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015609 201 LCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 201 ~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
.|++.+|++||++.. ....++.|.+|.+++.+++++||+|++.+..|.+.+ |+ +.+.|. ..+++.
T Consensus 199 eAe~~aA~~fgAd~t----yfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~-~a--------Lilsga--~PVYl~ 263 (713)
T PRK15399 199 EAEEYIARTFGAEQS----YIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLA-HL--------LMMSDV--VPIWLK 263 (713)
T ss_pred HHHHHHHHHhCCCcE----EEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHH-HH--------HHHcCC--eeEEec
Confidence 367789999999984 233334467999999999999999999997654433 32 344553 233332
Q ss_pred cCC-CC---CCCCH-----HHHHHHhccC----CCcEEEEe-CCCCCccccHHHHHHHHHHcCCEE-EEecccccccccc
Q 015609 281 VNP-QT---GYIDY-----EKLEEKAMDY----RPKILICG-GSSYPREWDYGRFRQIADKCGAVL-MCDMAHISGLIAA 345 (403)
Q Consensus 281 vd~-~~---g~ID~-----d~Le~~i~~~----~pklViv~-~s~~g~~~Di~~I~~Iake~Ga~L-ivDaAh~~Glia~ 345 (403)
... .. +.|+. +.|+++++++ +|+.+++. ++.+|.+.|+++|.++| |+.+ ++|.||++-....
T Consensus 264 P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~ 340 (713)
T PRK15399 264 PTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFH 340 (713)
T ss_pred ccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcC
Confidence 111 11 23555 9999998764 24555554 45569999999999998 6776 6999999765333
Q ss_pred cccc--CCCC---cccEE---EEcCcCCCcCCce-EEEEEeC
Q 015609 346 KELA--SPFD---YCDIV---TSTTHKSLRGPRG-GIIFFRR 378 (403)
Q Consensus 346 g~~~--~p~~---~aDiv---t~StHKtL~GP~G-G~I~~~~ 378 (403)
+.++ .++. .+|.+ +.|+||+|.|... .+|..+.
T Consensus 341 p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~ 382 (713)
T PRK15399 341 PIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKG 382 (713)
T ss_pred cccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecC
Confidence 3222 2231 25766 9999999988764 6666544
No 186
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.23 E-value=1.7e-09 Score=109.30 Aligned_cols=208 Identities=15% Similarity=0.135 Sum_probs=124.2
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC--CCCCcceEEeCC-
Q 015609 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD--SDNWGVNVQPYS- 225 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~--~~~~~v~V~~~S- 225 (403)
.+.+.|-.+++. .++.+.+++...+.+.....|+. ..|.. ++.+...+.+.+.+|.+ .+ -+|++++
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~~ia~~~~~~~~~~~~~~---~~vi~t~G 99 (383)
T TIGR03540 29 VDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPS---YEGML---AYRQAVADWYKRRFGVELDPE---TEVLSLIG 99 (383)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCCH---HHHHHHHHHHHHhhCCCCCCC---CeEEECCC
Confidence 444666554433 47778888887654321111211 12321 22222223344444542 22 1365554
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHHHHHHHhccCCCcE
Q 015609 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d~Le~~i~~~~pkl 304 (403)
+++++..++.+++++||+|++..+.+..... .....| .+++++++++++ ..+|++++++.+.+ ++|+
T Consensus 100 ~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~---------~~~~~G--~~v~~v~~~~~~g~~~d~~~l~~~~~~-~~~~ 167 (383)
T TIGR03540 100 SKEGIAHIPLAFVNPGDIVLVPDPGYPVYRI---------GTLFAG--GEPYEMPLKEENGFLPDFDAIPEDIAK-KAKL 167 (383)
T ss_pred cHHHHHHHHHHhCCCCCEEEEeCCCCcchHH---------HHHhcC--CEEEEEecCcccCCccCHHHHHhhccc-cceE
Confidence 5789999999999999999999887654321 122334 456666666443 45899999988864 6898
Q ss_pred EEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CCC---cccEEEEcCcCCCc--CCceE
Q 015609 305 LICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFD---YCDIVTSTTHKSLR--GPRGG 372 (403)
Q Consensus 305 Viv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~---~aDivt~StHKtL~--GP~GG 372 (403)
|++..+++ |...+ +++|.++|+++|+++++|.++.--.......+. .++ ...+++.|+.|+|+ |-|-|
T Consensus 168 v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG 247 (383)
T TIGR03540 168 MFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIG 247 (383)
T ss_pred EEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceee
Confidence 87764444 55666 688889999999999999998632211101111 111 13367789999873 33449
Q ss_pred EEEEeCC
Q 015609 373 IIFFRRG 379 (403)
Q Consensus 373 ~I~~~~~ 379 (403)
+++.+++
T Consensus 248 ~~i~~~~ 254 (383)
T TIGR03540 248 MAVGNAD 254 (383)
T ss_pred EEeCCHH
Confidence 9887653
No 187
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.23 E-value=1.2e-10 Score=118.10 Aligned_cols=150 Identities=25% Similarity=0.300 Sum_probs=110.5
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh----ccCC----CeEEecCCCCCccccccccCCccchhhhcccc
Q 015609 202 CFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL----LLPG----DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF 273 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al----l~pG----D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~ 273 (403)
.+++++++-|.+. +.+|+.+|.++-.+-+..+ -..| +.||+++..||-+ +.+..=.+
T Consensus 114 Lq~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN-----------PASAam~G 178 (496)
T COG1003 114 LQEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN-----------PASAAMAG 178 (496)
T ss_pred HHHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC-----------hhhHhhcC
Confidence 4668999999998 7899999987555544433 2234 4688888766543 23322234
Q ss_pred eEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE-eCCCCC-ccccHHHHHHHHHHcCCEEEEeccccccccccccccCC
Q 015609 274 FESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC-GGSSYP-REWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASP 351 (403)
Q Consensus 274 ~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv-~~s~~g-~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p 351 (403)
++++.+++++ +|.+|+++|++++.+ +...+++ .++..| ...+|.+|++|.|++|..|.+|+|..-++++. ..|
T Consensus 179 ~~VV~V~~~~-~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~---~rP 253 (496)
T COG1003 179 FKVVVVKCDE-NGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGL---ARP 253 (496)
T ss_pred ceEEEEecCC-CCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhcc---ccc
Confidence 7888888884 799999999999985 4554544 455555 46799999999999999999999988776642 233
Q ss_pred CC-cccEEEEcCcCCCcCCce
Q 015609 352 FD-YCDIVTSTTHKSLRGPRG 371 (403)
Q Consensus 352 ~~-~aDivt~StHKtL~GP~G 371 (403)
-+ ++|++-...||||+.|+|
T Consensus 254 Gd~G~DV~HlNLHKTF~iPHG 274 (496)
T COG1003 254 GDMGFDVVHLNLHKTFCIPHG 274 (496)
T ss_pred cccccceEEeecccccccCCC
Confidence 33 499999999999988875
No 188
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.22 E-value=1.2e-09 Score=111.56 Aligned_cols=214 Identities=18% Similarity=0.161 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHhhhcccceeccCc------cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC
Q 015609 138 EIFDIMEKEKQRQFKGIELIASEN------FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD 211 (403)
Q Consensus 138 ei~~li~~e~~rq~~~l~LiaSen------~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg 211 (403)
++.+.+.+......+.+.|-.+.. ++++.+++++...+......+|+. ..|. . ..|+.++++++
T Consensus 18 ~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~---~~g~------~-~lr~~ia~~l~ 87 (403)
T TIGR01265 18 AIVDNLKVKPNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAP---SVGA------L-AAREAVAEYLS 87 (403)
T ss_pred HHHHHHHHHHhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCCC------H-HHHHHHHHHHH
Confidence 444444444344556777776642 457889999887765432112211 1221 1 24556777777
Q ss_pred C------CCCCCcceEE-eCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC
Q 015609 212 L------DSDNWGVNVQ-PYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ 284 (403)
Q Consensus 212 ~------~~~~~~v~V~-~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~ 284 (403)
. ++. +|+ ++++|+|+.+++.+++.+||+|++....+.... ......| ++++.++++++
T Consensus 88 ~~~~~~~~~~----~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~---------~~~~~~g--~~~~~~~~~~~ 152 (403)
T TIGR01265 88 SDLPGKLTAD----DVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYD---------TRAAFSG--LEVRLYDLLPE 152 (403)
T ss_pred hhcCCCCCHH----HEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHH---------HHHHHcC--CEEEEecCCcc
Confidence 4 232 344 445789999999999999999999987654321 1122233 34555555432
Q ss_pred -CCCCCHHHHHHHhccCCCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC---C-c
Q 015609 285 -TGYIDYEKLEEKAMDYRPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---D-Y 354 (403)
Q Consensus 285 -~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~-~ 354 (403)
++.+|++++++++.. ++++|++..++ +|...+ +++|.++|+++|+++++|.++.- +...+....++ + .
T Consensus 153 ~~~~~d~~~l~~~~~~-~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~ 230 (403)
T TIGR01265 153 KDWEIDLDGLEALADE-KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGH-MVFGDAPFIPMASFASI 230 (403)
T ss_pred cCCccCHHHHHHHhCc-CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccc-cccCCCCccchhhhccC
Confidence 457999999998864 56777665443 455654 88899999999999999998652 22211100111 1 1
Q ss_pred cc-EEEEcCcCCC--cCCceEEEEEeC
Q 015609 355 CD-IVTSTTHKSL--RGPRGGIIFFRR 378 (403)
Q Consensus 355 aD-ivt~StHKtL--~GP~GG~I~~~~ 378 (403)
.. +++.|+.|++ .|-|-|+++..+
T Consensus 231 ~~vi~~~S~SK~~~~pGlRiG~~v~~~ 257 (403)
T TIGR01265 231 VPVLSLGGISKRWVVPGWRLGWIIIHD 257 (403)
T ss_pred CcEEEEeecccccCCCcceEEEEEEeC
Confidence 22 5678999985 444558888754
No 189
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.21 E-value=1.5e-09 Score=109.85 Aligned_cols=205 Identities=17% Similarity=0.077 Sum_probs=122.4
Q ss_pred hcccceeccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeC-C
Q 015609 151 FKGIELIASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPY-S 225 (403)
Q Consensus 151 ~~~l~LiaSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~-S 225 (403)
..-+.|-.+++.. ++.+.+++...+.+.. ..|+.. .| ...+++...+.+.+.+| .+++ +|.++ +
T Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~---~g---~~~lr~~ia~~~~~~~~~~~~~~----~i~~~~g 99 (393)
T PRK05764 31 RDVISLGAGEPDFDTPEHIKEAAIEALDDGK-TKYTPA---AG---IPELREAIAAKLKRDNGLDYDPS----QVIVTTG 99 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCCC---CC---hHHHHHHHHHHHHHHhCCCCCHH----HEEEeCC
Confidence 3445555444433 5788888876664321 112111 12 22333322222333333 3332 34444 5
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccCCCcE
Q 015609 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~~pkl 304 (403)
+++|+.+++.+++++||+|++....|.++.. .+...| .++++++++++ +..+|++++++++.. ++++
T Consensus 100 ~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~---------~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~ 167 (393)
T PRK05764 100 AKQALYNAFMALLDPGDEVIIPAPYWVSYPE---------MVKLAG--GVPVFVPTGEENGFKLTVEQLEAAITP-KTKA 167 (393)
T ss_pred cHHHHHHHHHHhcCCCCEEEecCCCCcchHH---------HHHHcC--CEEEEEecCcccCCcCCHHHHHHhhCc-cceE
Confidence 6789999999999999999999877654321 123334 35566666533 356899999998864 6787
Q ss_pred EEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccccccccCC-----CC--cccEEEEcCcCCCc--CCc
Q 015609 305 LICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASP-----FD--YCDIVTSTTHKSLR--GPR 370 (403)
Q Consensus 305 Viv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p-----~~--~aDivt~StHKtL~--GP~ 370 (403)
|++...+ .|.+. ++++|.++|+++|+++++|.++... ...+....+ .+ ..++++.|+.|+++ |.+
T Consensus 168 v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R 246 (393)
T PRK05764 168 LILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKL-VYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWR 246 (393)
T ss_pred EEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccce-eeCCCCcccHHHcCCCCcCCEEEEecCcccccCccce
Confidence 7665444 34444 5888999999999999999997642 211110001 11 25688899999863 334
Q ss_pred eEEEEEeCC
Q 015609 371 GGIIFFRRG 379 (403)
Q Consensus 371 GG~I~~~~~ 379 (403)
.|+++.+++
T Consensus 247 iG~i~~~~~ 255 (393)
T PRK05764 247 LGYAAGPKE 255 (393)
T ss_pred eEEEecCHH
Confidence 588886643
No 190
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.21 E-value=9.2e-11 Score=123.46 Aligned_cols=163 Identities=22% Similarity=0.249 Sum_probs=117.4
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeee-
Q 015609 201 LCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPY- 279 (403)
Q Consensus 201 ~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~- 279 (403)
+|++.+|++||+++. ..+.++.|.||.+++.+++.+||+||+....|.++. |+ +-++|.. .+++
T Consensus 74 eAqe~aA~~fgAd~t----yFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~-~g--------lilaGa~--Pvyl~ 138 (557)
T COG1982 74 EAQELAARVFGADHT----YFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIH-HG--------LILAGAT--PVYLE 138 (557)
T ss_pred HHHHHHHHHhCCCce----EEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHH-HH--------HHHcCCc--eEEec
Confidence 366789999999985 233444557999999999999999999998776554 44 2344432 2222
Q ss_pred -ecCCC---CCCCCHHHHHHHhccCCC--cEEEE-eCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCC-
Q 015609 280 -KVNPQ---TGYIDYEKLEEKAMDYRP--KILIC-GGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASP- 351 (403)
Q Consensus 280 -~vd~~---~g~ID~d~Le~~i~~~~p--klViv-~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p- 351 (403)
..|+. -+.|+.+.+++.+.+++- |++++ .++.+|...|+++|.+.++++++++.+|.+|.+-....+..+..
T Consensus 139 p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~ 218 (557)
T COG1982 139 PSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESA 218 (557)
T ss_pred CCCCccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchh
Confidence 22221 246999999998876532 55544 45567999999999999999999999999999876554444432
Q ss_pred C-CcccEEEEcCcCCCcCCc-eEEEEEeC
Q 015609 352 F-DYCDIVTSTTHKSLRGPR-GGIIFFRR 378 (403)
Q Consensus 352 ~-~~aDivt~StHKtL~GP~-GG~I~~~~ 378 (403)
. ..+|+++.|+||.+++-. +.+|-.++
T Consensus 219 ~~~~~~~~tqS~HK~l~alSQaS~iHv~~ 247 (557)
T COG1982 219 LNGGADFVTQSTHKLLAALSQASMIHVKD 247 (557)
T ss_pred hhcCceEEEechhhhhhhhhhhHHHhhCC
Confidence 2 249999999999987754 46666554
No 191
>PRK08363 alanine aminotransferase; Validated
Probab=99.21 E-value=1.4e-09 Score=110.73 Aligned_cols=197 Identities=18% Similarity=0.144 Sum_probs=120.6
Q ss_pred cccceeccCc-----cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHc----C--CCCCCCcce
Q 015609 152 KGIELIASEN-----FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF----D--LDSDNWGVN 220 (403)
Q Consensus 152 ~~l~LiaSen-----~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lf----g--~~~~~~~v~ 220 (403)
.-|.|..+.- ..++.+.+++...+.... ..|+. ..|. .++ |+.+++++ | .+++ +
T Consensus 31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~-~~Y~~---~~g~---~~l----r~~ia~~~~~~~g~~~~~~----~ 95 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGH-NYYGP---SEGL---PEL----REAIVKREKRKNGVDITPD----D 95 (398)
T ss_pred CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCC-CCCCC---CCCc---HHH----HHHHHHHHHHhcCCCCChh----h
Confidence 4477765543 368888998887664321 01110 1122 223 33455554 3 3443 3
Q ss_pred EEeC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeee-ecCCCCCCCCHHHHHHHhc
Q 015609 221 VQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPY-KVNPQTGYIDYEKLEEKAM 298 (403)
Q Consensus 221 V~~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~-~vd~~~g~ID~d~Le~~i~ 298 (403)
|+++ ++++|+.+++.+++++||+|++....|.+... .+...|. ..+.+ ..++++..+|++++++++.
T Consensus 96 i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~---------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~ 164 (398)
T PRK08363 96 VRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTG---------LVKFYGG--VPVEYRTIEEEGWQPDIDDIRKKIT 164 (398)
T ss_pred EEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHHcCC--EEEEeccccccCCcCCHHHHHhhCC
Confidence 5555 56789999999999999999999877654421 1233332 34444 3444455699999999886
Q ss_pred cCCCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CCCc-cc-EEEEcCcCCC--c
Q 015609 299 DYRPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFDY-CD-IVTSTTHKSL--R 367 (403)
Q Consensus 299 ~~~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~~-aD-ivt~StHKtL--~ 367 (403)
+ ++++|++...+ +|...+ +++|.++|+++|+++++|.++.-- ...+.... .+.. .. +++.|++|++ .
T Consensus 165 ~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~-~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~ 242 (398)
T PRK08363 165 E-KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLM-TYEGKHVSPGSLTKDVPVIVMNGLSKVYFAT 242 (398)
T ss_pred c-ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhh-ccCCcccCHHHcCcCCcEEEEecchhccCCc
Confidence 4 57877765444 455555 888999999999999999997642 21111111 1111 22 5578999985 4
Q ss_pred CCceEEEEE
Q 015609 368 GPRGGIIFF 376 (403)
Q Consensus 368 GP~GG~I~~ 376 (403)
|.+-|+++.
T Consensus 243 GlRiG~~~~ 251 (398)
T PRK08363 243 GWRLGYIYF 251 (398)
T ss_pred cceEEEEEE
Confidence 455589887
No 192
>PRK09265 aminotransferase AlaT; Validated
Probab=99.20 E-value=1.9e-09 Score=110.10 Aligned_cols=198 Identities=14% Similarity=0.151 Sum_probs=119.9
Q ss_pred hcccceecc-Cc----cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHc------CCCCCCCcc
Q 015609 151 FKGIELIAS-EN----FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF------DLDSDNWGV 219 (403)
Q Consensus 151 ~~~l~LiaS-en----~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lf------g~~~~~~~v 219 (403)
...+.|-.+ ++ ..++.+.+++...+... .+|+.. .|.. . .|+.+++++ +++++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~--~~Y~~~---~G~~---~----lr~~ia~~~~~~~~~~~~~~---- 96 (404)
T PRK09265 33 HKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA--QGYSDS---KGLF---S----ARKAIMQYYQQKGIPDVDVD---- 96 (404)
T ss_pred CCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC--CCCCCC---CCcH---H----HHHHHHHHHhccCCCCCCcc----
Confidence 455666553 21 15778888877654321 122221 2321 1 244455555 56654
Q ss_pred eEEeCCh-HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHh
Q 015609 220 NVQPYSC-TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKA 297 (403)
Q Consensus 220 ~V~~~SG-T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i 297 (403)
+|++++| ++++..++.+++++||+|++....|.... ..+...| ..++.+.++.+ ++.+|++++++++
T Consensus 97 ~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~---------~~~~~~g--~~~v~~~~~~~~~~~~d~~~l~~~~ 165 (404)
T PRK09265 97 DIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWT---------AAVSLSG--GKPVHYLCDEEAGWFPDLDDIRSKI 165 (404)
T ss_pred cEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChH---------HHHHHcC--CEEEEEecccccCCCCCHHHHHHhc
Confidence 4666655 56788899999999999999988765432 1122333 33444444432 4569999999988
Q ss_pred ccCCCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC---C-ccc-EEEEcCcCCC-
Q 015609 298 MDYRPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---D-YCD-IVTSTTHKSL- 366 (403)
Q Consensus 298 ~~~~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~-~aD-ivt~StHKtL- 366 (403)
.. ++++|++..++ +|..++ +++|.++|+++|+++++|.++.- +...+....++ . ... +++.|+.|++
T Consensus 166 ~~-~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 243 (404)
T PRK09265 166 TP-RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDK-ILYDGAVHISIASLAPDLLCVTFNGLSKAYR 243 (404)
T ss_pred cc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhh-ccCCCCCcCCHHHcCCCceEEEEecchhhcc
Confidence 64 67877665444 466777 88899999999999999998652 22111100111 1 122 4467889987
Q ss_pred -cCCceEEEEEe
Q 015609 367 -RGPRGGIIFFR 377 (403)
Q Consensus 367 -~GP~GG~I~~~ 377 (403)
.|-|-|+++..
T Consensus 244 ~pGlRiG~~v~~ 255 (404)
T PRK09265 244 VAGFRVGWMVLS 255 (404)
T ss_pred CcccceEEEEEe
Confidence 35566888864
No 193
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.20 E-value=8.5e-11 Score=119.60 Aligned_cols=191 Identities=23% Similarity=0.247 Sum_probs=134.9
Q ss_pred eccCccC---------cHHHHHHHHHHhhhcCCCCCCCCccccchH-HHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCh
Q 015609 157 IASENFV---------CRAVMEALGSHLTNKYSEGYPGARYYTGNQ-YIDQIENLCFERALKAFDLDSDNWGVNVQPYSC 226 (403)
Q Consensus 157 iaSen~~---------~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~-~~~~lE~~arerla~lfg~~~~~~~v~V~~~SG 226 (403)
+.|-||+ .+.+.+++. +|....-++|+..|+. ...++|++ .|+++|.+++ +.|.-|
T Consensus 141 lgSYNYLGFa~~~g~ca~~~~~~~~-----kygl~~css~~e~G~~~~hkelE~l----~A~f~g~e~a-----~vF~mG 206 (519)
T KOG1357|consen 141 LGSYNYLGFAQSVGPCAEASLKSFD-----KYGLSRCSSRHEAGTTEEHKELEEL----VARFLGVEDA-----IVFSMG 206 (519)
T ss_pred ecccccccccccCCcCChHHHHHHH-----HhcccccccchhcccHHHHHHHHHH----HHHhcCCcce-----EEEecc
Confidence 4566665 666777664 3444455667776764 44667764 8999999983 677788
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc-------
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD------- 299 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~------- 299 (403)
...|.+.+.+++.||.-|+...+.|..... .+.+.|. .+.-|+. .|+..||+++++
T Consensus 207 f~TNs~~~p~l~~~gsLIiSDelNHaSi~~---------GaRLSgA--tiRVfkH------Ndm~~LEr~Lrd~I~~gqP 269 (519)
T KOG1357|consen 207 FATNSMNIPSLLGKGSLIISDELNHASLIT---------GARLSGA--TTRVFRH------NDMQGLERLLRDAIVYGQP 269 (519)
T ss_pred ccccccCcceeecCCcceeeccccchheec---------cccccCc--eEEEEec------CCHHHHHHHHHHHHhcCCC
Confidence 889999999999999999999887644321 1344453 3344443 467777777764
Q ss_pred --CCC--cEEEEeCC---CCCccccHHHHHHHHHHcCCEEEEecccccccccc-c--ccc--C-CCCcccEEEEcCcCCC
Q 015609 300 --YRP--KILICGGS---SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA-K--ELA--S-PFDYCDIVTSTTHKSL 366 (403)
Q Consensus 300 --~~p--klViv~~s---~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~-g--~~~--~-p~~~aDivt~StHKtL 366 (403)
++| |++++... .-+.+.++.++.+++|++.++|+.|+||+.|.++. | +.. . ....+|++.+++.|++
T Consensus 270 ~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSf 349 (519)
T KOG1357|consen 270 KTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSF 349 (519)
T ss_pred CcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhc
Confidence 233 45555433 33678999999999999999999999999999853 2 211 1 1124999999999986
Q ss_pred cCCceEEEEEeCC
Q 015609 367 RGPRGGIIFFRRG 379 (403)
Q Consensus 367 ~GP~GG~I~~~~~ 379 (403)
|-.||.|.+++.
T Consensus 350 -ga~GGyiagsk~ 361 (519)
T KOG1357|consen 350 -GAAGGYIAGSKE 361 (519)
T ss_pred -ccccceecCcHH
Confidence 567899988774
No 194
>PRK08912 hypothetical protein; Provisional
Probab=99.19 E-value=1.6e-09 Score=109.75 Aligned_cols=206 Identities=15% Similarity=0.133 Sum_probs=122.3
Q ss_pred cccceeccCc--cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeC-Ch
Q 015609 152 KGIELIASEN--FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DSDNWGVNVQPY-SC 226 (403)
Q Consensus 152 ~~l~LiaSen--~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~~~~~v~V~~~-SG 226 (403)
..++|-.+.. ..++.+.+++...+.... .+|+. ..|.. ++.+...+.+.+.+|. +++ .+|+++ ++
T Consensus 27 ~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~ia~~~~~~~g~~~~~~---~~i~~t~G~ 96 (387)
T PRK08912 27 GAINLGQGFPDDPGPEDVRRAAADALLDGS-NQYPP---MMGLP---ELRQAVAAHYARFQGLDLDPE---TEVMVTSGA 96 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCcH---HHHHHHHHHHHHHhCCCCCCc---ccEEEeCCc
Confidence 3455553321 235677777665543221 11221 12322 2222223334444554 332 135444 56
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEE
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILI 306 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklVi 306 (403)
++|+.+++.+++++||+|++....|.+.. ..+...| .+++.++++++++.+|++++++++.. ++|+|+
T Consensus 97 ~~al~~~~~~~~~~gd~Vlv~~p~y~~~~---------~~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~ 164 (387)
T PRK08912 97 TEALAAALLALVEPGDEVVLFQPLYDAYL---------PLIRRAG--GVPRLVRLEPPHWRLPRAALAAAFSP-RTKAVL 164 (387)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhhH---------HHHHHcC--CEEEEEecCcccCcCCHHHHHHHhCc-cceEEE
Confidence 88999999999999999999987764432 1123333 45566666544568999999998864 678777
Q ss_pred EeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CC---CcccEEEEcCcCCC--cCCceEEE
Q 015609 307 CGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PF---DYCDIVTSTTHKSL--RGPRGGII 374 (403)
Q Consensus 307 v~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~---~~aDivt~StHKtL--~GP~GG~I 374 (403)
+...+ +|...+ +++|.++|+++++++++|.++.-.......... .+ ...++++.|++|.+ .|-|-|++
T Consensus 165 l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~ 244 (387)
T PRK08912 165 LNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFV 244 (387)
T ss_pred EeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEE
Confidence 66444 355555 677889999999999999997542221101110 11 12468899999986 23344999
Q ss_pred EEeCC
Q 015609 375 FFRRG 379 (403)
Q Consensus 375 ~~~~~ 379 (403)
+++.+
T Consensus 245 ~~~~~ 249 (387)
T PRK08912 245 CAAPP 249 (387)
T ss_pred ecCHH
Confidence 88654
No 195
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.19 E-value=1.6e-09 Score=112.18 Aligned_cols=189 Identities=15% Similarity=0.140 Sum_probs=116.7
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC------CCCCCcceEEe-CChHHHHHHHHh
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL------DSDNWGVNVQP-YSCTSANFAVYT 235 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~------~~~~~~v~V~~-~SGT~An~aal~ 235 (403)
.++.+.+++...+......+|+.. .|.. + +|+.++++++. +++ +|+. .++++|+.+++.
T Consensus 70 ~~~~~~~a~~~al~~~~~~~Y~~~---~G~~---~----lr~aia~~~~~~~~~~~~~~----~v~it~G~~~al~l~~~ 135 (430)
T PLN00145 70 TAPEAEDAVAAALRSGKYNSYSTC---VGLL---P----ARRAIAEYLSRDLPYELSTD----DIYLTAGCAQAIEIIMS 135 (430)
T ss_pred CCHHHHHHHHHHHHcCcCCCCCCC---ccCH---H----HHHHHHHHHhhccCCCCChh----hEEEeCCHHHHHHHHHH
Confidence 368899998877654221122211 1221 1 34456666542 333 3444 457889999999
Q ss_pred hhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccCCCcEEEEeCCCC--
Q 015609 236 GLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDYRPKILICGGSSY-- 312 (403)
Q Consensus 236 all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~~pklViv~~s~~-- 312 (403)
++++|||+|++....+..+.. .....+ .+++.+++.++ +..+|++++++++.+ +++++++..+++
T Consensus 136 ~l~~~Gd~Vlv~~P~y~~y~~---------~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~P~NPt 203 (430)
T PLN00145 136 VLAQPGANILLPRPGYPLYEA---------RAVFSG--LEVRHFDLLPERGWEVDLEGVEALADE-NTVAMVIINPNNPC 203 (430)
T ss_pred HhcCCCCEEEEcCCCCccHHH---------HHHHcC--CEEEEeeCCcccCCcCCHHHHHHHhCc-CceEEEEeCCCCCC
Confidence 999999999999876544321 122334 34455554332 457999999998875 466666554444
Q ss_pred Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC---Cc-cc-EEEEcCcCCC--cCCceEEEEEeC
Q 015609 313 PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---DY-CD-IVTSTTHKSL--RGPRGGIIFFRR 378 (403)
Q Consensus 313 g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~~-aD-ivt~StHKtL--~GP~GG~I~~~~ 378 (403)
|.+.+ +++|.++|+++|+++++|.+..- ++..+....++ .. .. +++.|+.|.+ .|-|-|+++...
T Consensus 204 G~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~ 278 (430)
T PLN00145 204 GSVYSYEHLAKIAETARKLGILVIADEVYDH-LTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCD 278 (430)
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEeccchh-hccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEec
Confidence 56666 77888889999999999998643 32221111121 11 12 6678999984 455669998743
No 196
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.18 E-value=3.7e-10 Score=113.10 Aligned_cols=201 Identities=15% Similarity=0.100 Sum_probs=130.5
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH-
Q 015609 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT- 227 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT- 227 (403)
.+-+.|-.++|. +++.+++++...+......+|+.. | .+ ..|+.+++++|.+.. .+|.+++|+
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----~------~~-~lr~~ia~~~~~~~~---~~I~~t~G~~ 91 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDP----R------AA-ALKAALRAAMGVPAG---ADVLLGNGSD 91 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCC----C------HH-HHHHHHHHHhCcCCC---CcEEEcCCHH
Confidence 345777667774 588999998876643111122221 1 11 246678899998643 146666665
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE
Q 015609 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv 307 (403)
+++..++.+++++||+|++....+.+.. ......| .+++++++++ ++.+|++++++++...++|+|++
T Consensus 92 ~~i~~~~~~~~~~gd~vlv~~P~y~~~~---------~~~~~~g--~~~~~i~~~~-~~~~d~~~l~~~~~~~~~~~v~l 159 (356)
T PRK04870 92 ELIQLLALACAKPGATVLAPEPGFVMYR---------MSAKLAG--LEFVGVPLTA-DFTLDLPAMLAAIAEHRPALVFL 159 (356)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCHHHHH---------HHHHHcC--CEEEEecCCC-CCCCCHHHHHHHhhcCCCCEEEE
Confidence 5777888888999999999886654321 1223334 4566667663 56899999999987667898877
Q ss_pred eCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-c-ccEEEEcCcCC-CcCCceEEEEEeCC
Q 015609 308 GGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-Y-CDIVTSTTHKS-LRGPRGGIIFFRRG 379 (403)
Q Consensus 308 ~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~-aDivt~StHKt-L~GP~GG~I~~~~~ 379 (403)
...+ +|...+.+++.+|++.+++++++|.+... +......+ .+. + --+++.|++|+ +.|.|-|+++.+++
T Consensus 160 ~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~-~~~~~~~~-~~~~~~~vi~~~S~SK~~~~GlRiG~~i~~~~ 234 (356)
T PRK04870 160 AYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQP-FAGDSWLP-RLARFPNLLVMRTVSKLGLAGLRLGYLAGHPA 234 (356)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchh-hcCcchHH-HHhhCCCEEEEecchhhhhHHHhhhhhhCCHH
Confidence 6444 46788999999998887999999998642 21111111 111 1 23678899993 23445588887653
No 197
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.18 E-value=2.6e-09 Score=109.45 Aligned_cols=207 Identities=14% Similarity=0.163 Sum_probs=124.7
Q ss_pred hcccceecc-Cc--cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC--C-CCCcceEEe-
Q 015609 151 FKGIELIAS-EN--FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD--S-DNWGVNVQP- 223 (403)
Q Consensus 151 ~~~l~LiaS-en--~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~--~-~~~~v~V~~- 223 (403)
.+.+.|..+ ++ ..++.+++++...+......+|+. ..|... +-+...+.+++.+|.+ + + +|+.
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~---LR~aia~~l~~~~g~~~~~~~----~I~it 108 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTE---YRGDAD---IRELLAARLAAFTGAPVDAAD----ELIIT 108 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCC---CCCCHH---HHHHHHHHHHHHhCCCCCCCC----CEEEe
Confidence 333455433 33 256788888876654321112221 123322 2222344567777853 3 2 3444
Q ss_pred CChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecC---C-CCCCCCHHHHHHHhcc
Q 015609 224 YSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVN---P-QTGYIDYEKLEEKAMD 299 (403)
Q Consensus 224 ~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd---~-~~g~ID~d~Le~~i~~ 299 (403)
.++++|+..++.+++++||+|++....|.+... .+...|. ++++++++ + ++..+|+++|++++++
T Consensus 109 ~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~---------~~~~~g~--~v~~v~~~~~~~~~~~~~d~~~l~~~~~~ 177 (405)
T PRK06207 109 PGTQGALFLAVAATVARGDKVAIVQPDYFANRK---------LVEFFEG--EMVPVQLDYLSADKRAGLDLDQLEEAFKA 177 (405)
T ss_pred CCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHH---------HHHHcCC--EEEEEeccccCcccCCCcCHHHHHHhhhh
Confidence 456789999999999999999999887654321 1233343 44555543 1 1356999999998865
Q ss_pred CCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CCCc-cc--EEEEcCcCCCc--
Q 015609 300 YRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFDY-CD--IVTSTTHKSLR-- 367 (403)
Q Consensus 300 ~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~~-aD--ivt~StHKtL~-- 367 (403)
++++|++..+++ |.+.+ +++|.++|+++|+++++|.+..--.......+. .+.. .| +++.|+.|+++
T Consensus 178 -~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lp 256 (405)
T PRK06207 178 -GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLS 256 (405)
T ss_pred -cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCc
Confidence 578776655454 55665 777888899999999999986532111111111 1111 12 67889999974
Q ss_pred CCceEEEEEeCC
Q 015609 368 GPRGGIIFFRRG 379 (403)
Q Consensus 368 GP~GG~I~~~~~ 379 (403)
|-|.|+++.+++
T Consensus 257 GlRiG~ii~~~~ 268 (405)
T PRK06207 257 GYRLGVAFGSPA 268 (405)
T ss_pred ccceEEEEcCHH
Confidence 666799987653
No 198
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.18 E-value=3e-10 Score=117.22 Aligned_cols=193 Identities=16% Similarity=0.146 Sum_probs=125.2
Q ss_pred cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc-C
Q 015609 162 FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL-P 240 (403)
Q Consensus 162 ~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~-p 240 (403)
.++++.++||.. |...|.|.+...+||+ .++++||.++ .+.+++|+.|+++++..+++ |
T Consensus 54 apS~~m~aAM~~-----------GDD~Y~gdpSv~~Lee----~vael~G~E~-----alpthqGRgaE~Il~~~~~~~~ 113 (467)
T TIGR02617 54 AVTQSMQAAMMR-----------GDEAYSGSRSYYALAE----SVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKR 113 (467)
T ss_pred CCCHHHHHHHHc-----------CCcccccCchHHHHHH----HHHHHhCCce-----EEECCCCchHHHHHHHhhcccc
Confidence 478999999873 2223556666777876 4889999987 36667999999999999998 7
Q ss_pred CCeEEecCC----CCCccccccccCCccchhhhcccceEEeee------ec-CCCCCCCCHHHHHHHhccCCC---cEEE
Q 015609 241 GDRIMGLDS----PSGGHLSHGYHTPGGKKVSAASIFFESFPY------KV-NPQTGYIDYEKLEEKAMDYRP---KILI 306 (403)
Q Consensus 241 GD~VL~~~~----ehgghlsh~~~~~~~~~v~~~g~~~~vv~~------~v-d~~~g~ID~d~Le~~i~~~~p---klVi 306 (403)
||+|++... .|.-|+.. ++..+.+.|.....+.. .+ .+..|.+|+++|+++|+++.+ -.+.
T Consensus 114 g~e~g~~~~~~~v~hn~~fet-----t~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~ 188 (467)
T TIGR02617 114 EQEKGLDRSKMVAFSNYFFDT-----TQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIV 188 (467)
T ss_pred cccccccccccccceEEEEec-----chHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeee
Confidence 888875442 33333221 11122334432211110 01 122589999999999986322 2222
Q ss_pred ---EeCCCCCcccc---HHHHHHHHHHcCCEEEEecccccc-cc--------ccccccCC-----CCcccEEEEcCcCCC
Q 015609 307 ---CGGSSYPREWD---YGRFRQIADKCGAVLMCDMAHISG-LI--------AAKELASP-----FDYCDIVTSTTHKSL 366 (403)
Q Consensus 307 ---v~~s~~g~~~D---i~~I~~Iake~Ga~LivDaAh~~G-li--------a~g~~~~p-----~~~aDivt~StHKtL 366 (403)
++.+..|.+++ +++++++|+++|+.++.|+|-.+- .. +.+.-... +.++|.+++|+.|.+
T Consensus 189 ~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKgl 268 (467)
T TIGR02617 189 ATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDA 268 (467)
T ss_pred eeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCC
Confidence 22222355554 667788999999999999986552 21 11211111 246999999999999
Q ss_pred cCCceEEEEEeCC
Q 015609 367 RGPRGGIIFFRRG 379 (403)
Q Consensus 367 ~GP~GG~I~~~~~ 379 (403)
+.|-||+|+.+++
T Consensus 269 gApvGg~Lag~d~ 281 (467)
T TIGR02617 269 MVPMGGLLCFKDD 281 (467)
T ss_pred CCcccceEEecch
Confidence 9999999999987
No 199
>PLN00175 aminotransferase family protein; Provisional
Probab=99.18 E-value=1.6e-09 Score=111.40 Aligned_cols=206 Identities=16% Similarity=0.113 Sum_probs=126.3
Q ss_pred hcccceeccCc--cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCC-
Q 015609 151 FKGIELIASEN--FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DSDNWGVNVQPYS- 225 (403)
Q Consensus 151 ~~~l~LiaSen--~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~~~~~v~V~~~S- 225 (403)
.+.|+|-.+.- ..++.+++++...+.... ..|+. ..|.. ++.+...+.+.+.+|. +++ -+|++++
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~Lr~aia~~~~~~~g~~~~~~---~~I~vt~G 123 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRDGK-NQYAR---GFGVP---ELNSAIAERFKKDTGLVVDPE---KEVTVTSG 123 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCC---CCCCH---HHHHHHHHHHHHHhCCCCCCC---CCEEEeCC
Confidence 34566654432 247788888877664311 11111 12332 2322223344455554 332 1355554
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEE
Q 015609 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklV 305 (403)
+++|+..++.++++|||+|++....|..+. ..+...| .++++++++++++.+|+++|++++.. ++|+|
T Consensus 124 ~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~~~~l~~~~~~-~~k~i 191 (413)
T PLN00175 124 CTEAIAATILGLINPGDEVILFAPFYDSYE---------ATLSMAG--AKIKTVTLRPPDFAVPEDELKAAFTS-KTRAI 191 (413)
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCCchhHH---------HHHHHcC--CEEEEEECCcccCCCCHHHHHHhcCc-CceEE
Confidence 678999999999999999999987654432 1233344 35566666544578999999999864 67888
Q ss_pred EEeCCCC--Cccc---cHHHHHHHHHHcCCEEEEeccccccccccccccC--CCC---cccEEEEcCcCCCc--CCceEE
Q 015609 306 ICGGSSY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFD---YCDIVTSTTHKSLR--GPRGGI 373 (403)
Q Consensus 306 iv~~s~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~---~aDivt~StHKtL~--GP~GG~ 373 (403)
++...++ |.+. ++++|.++|+++++++++|.++.-.... +.... .+. .--+++.|+.|+++ |-|-|+
T Consensus 192 ~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~-~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~ 270 (413)
T PLN00175 192 LINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFE-GDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGW 270 (413)
T ss_pred EecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccC-CcccChhhCCCCcCcEEEEecchhhccCcchheee
Confidence 7765444 4454 5778889999999999999997543221 11111 111 13477889999873 445599
Q ss_pred EEEeCC
Q 015609 374 IFFRRG 379 (403)
Q Consensus 374 I~~~~~ 379 (403)
++.++.
T Consensus 271 ~v~~~~ 276 (413)
T PLN00175 271 AIAPPH 276 (413)
T ss_pred eEeCHH
Confidence 988753
No 200
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.18 E-value=3.3e-10 Score=113.69 Aligned_cols=197 Identities=14% Similarity=0.090 Sum_probs=126.2
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH-
Q 015609 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT- 227 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT- 227 (403)
...+.|-.++++ .++.+++++...+.. + ..|+.. . ..+ .|+.++++++++++ +|.+++|+
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~-----~--~~~----lr~~ia~~~~~~~~----~i~~t~G~~ 94 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADE-L-HRYPDG-----S--GFE----LKAALAEKFGVDPE----RIILGNGSD 94 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC-----c--HHH----HHHHHHHHhCcCHH----HEEEcCCHH
Confidence 345666655555 477888888765532 2 122211 1 122 45668899998764 46666654
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE
Q 015609 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv 307 (403)
+++..++.+++++||+|++....+.... ......| .+++.++.+ ++.+|++++++++.+ ++++|++
T Consensus 95 ~~l~~~~~~l~~~gd~vl~~~p~y~~~~---------~~~~~~g--~~~~~~~~~--~~~~~~~~l~~~~~~-~~~~v~l 160 (367)
T PRK02731 95 EILELLARAYLGPGDEVIYSEHGFAVYP---------IAAQAVG--AKPVEVPAK--DYGHDLDAMLAAVTP-RTRLVFI 160 (367)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCHHHHH---------HHHHHcC--CeEEEeccc--CCCCCHHHHHHHhCC-CCcEEEE
Confidence 5677788888999999999876643211 1122233 345555553 567999999999864 6888877
Q ss_pred eCCC--CCccccHHHHHHHHHHc--CCEEEEeccccccccccccccCCC---C-c-ccEEEEcCcCCC--cCCceEEEEE
Q 015609 308 GGSS--YPREWDYGRFRQIADKC--GAVLMCDMAHISGLIAAKELASPF---D-Y-CDIVTSTTHKSL--RGPRGGIIFF 376 (403)
Q Consensus 308 ~~s~--~g~~~Di~~I~~Iake~--Ga~LivDaAh~~Glia~g~~~~p~---~-~-aDivt~StHKtL--~GP~GG~I~~ 376 (403)
...+ +|...+.++|.++|+.+ |+++++|.++...... +....++ + . -.+++.|+.|.+ .|.+-|++++
T Consensus 161 ~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~ 239 (367)
T PRK02731 161 ANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRR-KDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIA 239 (367)
T ss_pred eCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccC-cCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeC
Confidence 6444 46789999999999875 9999999997643321 1111111 1 1 236677999975 3455599988
Q ss_pred eCC
Q 015609 377 RRG 379 (403)
Q Consensus 377 ~~~ 379 (403)
+++
T Consensus 240 ~~~ 242 (367)
T PRK02731 240 PPE 242 (367)
T ss_pred CHH
Confidence 754
No 201
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.17 E-value=2.6e-09 Score=108.93 Aligned_cols=213 Identities=18% Similarity=0.180 Sum_probs=128.1
Q ss_pred HHHHHHHHHHh---hhcccceeccCc------cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHH
Q 015609 139 IFDIMEKEKQR---QFKGIELIASEN------FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKA 209 (403)
Q Consensus 139 i~~li~~e~~r---q~~~l~LiaSen------~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~l 209 (403)
+.+++...+.. .++.++|-.++. ..++.+++++...+......+|.- ..|.. + .|+.++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~---~----lr~aia~~ 85 (401)
T TIGR01264 16 IRAIVDNMKVKPNPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAP---TVGAL---S----AREAIASY 85 (401)
T ss_pred HHHHHHHHHhhhhcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCC---CCCCH---H----HHHHHHHH
Confidence 55555433322 234466665432 357888998877654321111210 11221 1 24456666
Q ss_pred cC-----CCCCCCcceEEeC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC
Q 015609 210 FD-----LDSDNWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP 283 (403)
Q Consensus 210 fg-----~~~~~~~v~V~~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~ 283 (403)
++ ++.+ +|..+ ++++|+.+++.+++++||+|++....+.... ......| .++++++++.
T Consensus 86 ~~~~~~~~~~~----~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~---------~~~~~~g--~~v~~~~~~~ 150 (401)
T TIGR01264 86 YHNPDGPIEAD----DVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYE---------TLAESMG--IEVKLYNLLP 150 (401)
T ss_pred HhhcCCCCCHH----HEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHH---------HHHHHcC--CEEEEeecCC
Confidence 65 4443 34444 5788999999999999999999886653321 1123334 4555555543
Q ss_pred C-CCCCCHHHHHHHhccCCCcEEEEeCCCC--Cccc---cHHHHHHHHHHcCCEEEEeccccccccccccccCCC---C-
Q 015609 284 Q-TGYIDYEKLEEKAMDYRPKILICGGSSY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---D- 353 (403)
Q Consensus 284 ~-~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~- 353 (403)
+ +..+|++.+++++++ ++++|++..+++ |... ++++|.++|+++|+++++|.+.. .+...+....++ .
T Consensus 151 ~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~ 228 (401)
T TIGR01264 151 DKSWEIDLKQLESLIDE-KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYG-DMVFSGATFEPLASLSS 228 (401)
T ss_pred ccCCCCCHHHHHHHhcc-CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhh-hhccCCcccccHHHcCC
Confidence 3 457999999998864 578887765444 4454 58888999999999999999854 232222111111 1
Q ss_pred ccc-EEEEcCcCCC--cCCceEEEEEeC
Q 015609 354 YCD-IVTSTTHKSL--RGPRGGIIFFRR 378 (403)
Q Consensus 354 ~aD-ivt~StHKtL--~GP~GG~I~~~~ 378 (403)
... +++.|+.|++ .|-|-|++++.+
T Consensus 229 ~~~vi~~~SfSK~~~~~GlRiG~iv~~~ 256 (401)
T TIGR01264 229 TVPILSCGGLAKRWLVPGWRLGWIIIHD 256 (401)
T ss_pred CCcEEEEccCcccCCCccceEEEEEecC
Confidence 112 6678999974 555669999864
No 202
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.17 E-value=1.8e-09 Score=114.17 Aligned_cols=197 Identities=18% Similarity=0.157 Sum_probs=121.9
Q ss_pred cccceeccCc-----cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHc------CCCCCCCcce
Q 015609 152 KGIELIASEN-----FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF------DLDSDNWGVN 220 (403)
Q Consensus 152 ~~l~LiaSen-----~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lf------g~~~~~~~v~ 220 (403)
+-|.|-.++- ..++.+++++...+... .+|+.. .|.. ..|+.+++++ +.+++ +
T Consensus 147 ~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~--~~Y~~~---~G~~-------~lReaia~~~~~~~~~~~~~~----~ 210 (517)
T PRK13355 147 HILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT--EGYSDS---KGLF-------SARKAIMQYAQLKGLPNVDVD----D 210 (517)
T ss_pred CeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC--CCCCCC---cChH-------HHHHHHHHHHHhcCCCCCChh----H
Confidence 4466655332 23888899887665321 123221 2221 1344455555 45553 4
Q ss_pred EEeCC-hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhc
Q 015609 221 VQPYS-CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAM 298 (403)
Q Consensus 221 V~~~S-GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~ 298 (403)
|+.++ +++++..++.+++++||+|++....|.... ..+...| .+++.++++++ +..+|++++++++.
T Consensus 211 I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~---------~~~~~~g--~~~v~~~~~~~~~~~~d~~~l~~~~~ 279 (517)
T PRK13355 211 IYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWT---------ACVNLAG--GTAVHYRCDEQSEWYPDIDDIRSKIT 279 (517)
T ss_pred EEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHH---------HHHHHCC--CEEEEeecCcccCCCCCHHHHHHhcC
Confidence 66655 567899999999999999999987764432 1223334 35566666544 35699999999886
Q ss_pred cCCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEecccccccccccc-ccCCCC-ccc--EE-EEcCcCCC--
Q 015609 299 DYRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKE-LASPFD-YCD--IV-TSTTHKSL-- 366 (403)
Q Consensus 299 ~~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~-~~~p~~-~aD--iv-t~StHKtL-- 366 (403)
. ++|+|++..+++ |.+.+ +++|.++|++++++|++|.+..- ++..+. ...... .-| ++ +.|+.|++
T Consensus 280 ~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~-~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~ 357 (517)
T PRK13355 280 S-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDR-LVMDGLEHTSIASLAPDLFCVTFSGLSKSHMI 357 (517)
T ss_pred c-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhh-hcCCCCCcccHHHhCCCCeEEEEecchhhccC
Confidence 4 688876665554 55666 78889999999999999998642 221111 111111 112 33 47889985
Q ss_pred cCCceEEEEEe
Q 015609 367 RGPRGGIIFFR 377 (403)
Q Consensus 367 ~GP~GG~I~~~ 377 (403)
.|-|-|+++..
T Consensus 358 ~G~RiG~~i~~ 368 (517)
T PRK13355 358 AGYRIGWMILS 368 (517)
T ss_pred cccceEEEEee
Confidence 56677998864
No 203
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.17 E-value=4.2e-10 Score=114.27 Aligned_cols=205 Identities=11% Similarity=0.045 Sum_probs=128.7
Q ss_pred hhcccceeccCccCcHHHHHHHHHHhhhcCCCCC-CCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHH
Q 015609 150 QFKGIELIASENFVCRAVMEALGSHLTNKYSEGY-PGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTS 228 (403)
Q Consensus 150 q~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~-pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~ 228 (403)
|.+..++.|++..+|++|++++...+.+....|. .-...+.+.++.+.++ .+++.++++|+.+.. |.+.+...|||.
T Consensus 2 ~~~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~-~~~~~Lr~Ll~~P~~-y~Vlfl~GggT~ 79 (364)
T PRK12462 2 HRNQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLA-QAEADLRDLLGIPDE-YGVVFLQGGSSL 79 (364)
T ss_pred CcccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHH-HHHHHHHHHhCCCCC-CeEEEEeccHHH
Confidence 3457899999999999999999988877443222 1123445566666555 489999999999532 224444557999
Q ss_pred HHHHHHhhhccCCCeEE-ecCCCCCccccccccCCccchhhhcccceEEeee--ecCCCCCCCCHHHHHHHhccCCCcEE
Q 015609 229 ANFAVYTGLLLPGDRIM-GLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPY--KVNPQTGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 229 An~aal~all~pGD~VL-~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~--~vd~~~g~ID~d~Le~~i~~~~pklV 305 (403)
++.++...++.+||+++ +.. .|++++.+. +.....| .++++.. ..+ .+..+++++++ +. .+.+.|
T Consensus 80 ~~ea~~~Nll~~g~~~~~~~~---tG~fg~r~~----~ea~~~g-~v~~~~~~~~~~-~~~~p~~~~~~--~~-~d~~~v 147 (364)
T PRK12462 80 QFSMIPMNFSRPGAAAPEYVT---TGYWSRKAI----GEASRVA-AMRVVWDGAASG-YRTLPSLAELD--WD-ARAPFR 147 (364)
T ss_pred HHHHHHHHcCCCCCcEEEEEe---CCHHHHHHH----HHHHhcC-CceEecCcCCCC-CCcCCCHHHhc--cC-CCCcEE
Confidence 99999999999999765 333 455554321 1111122 1222221 111 12356666652 11 135666
Q ss_pred EEe--CCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 306 ICG--GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 306 iv~--~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
.+. .+++|...+ ++.+.++++++||++-.+|.. +.+++..|+++++.+|+|+ |.| ++++.++.
T Consensus 148 ~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~-----pid~~~~dvi~agsQKnlg-P~Gltvvivs~~ 213 (364)
T PRK12462 148 HYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSR-----PFDVEAYGMVYAHAQKNLG-PAGVTVAIIRRA 213 (364)
T ss_pred EEccCCCCceEecC-----cccccCCCeEEEEcCchhhCC-----CCChHHccEEEeeccccCC-CCceEEEEECHH
Confidence 544 345676664 333346899999998777643 2334446999999999995 999 65555553
No 204
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.17 E-value=3.9e-10 Score=113.09 Aligned_cols=225 Identities=16% Similarity=0.222 Sum_probs=136.2
Q ss_pred cccceeccC-c-cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeC-ChH
Q 015609 152 KGIELIASE-N-FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD-SDNWGVNVQPY-SCT 227 (403)
Q Consensus 152 ~~l~LiaSe-n-~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~-~~~~~v~V~~~-SGT 227 (403)
+-|.|.-++ . .++|.|++|+...+... -.|||.. ...+.+.+ .+..++-.+.+ ..+| |+++ +-.
T Consensus 26 DvlPmWVADMDf~~pp~i~~Al~~rvdhG-vfGY~~~----~~~~~~ai----~~w~~~r~~~~i~~e~---i~~~p~VV 93 (388)
T COG1168 26 DVLPMWVADMDFPTPPEIIEALRERVDHG-VFGYPYG----SDELYAAI----AHWFKQRHQWEIKPEW---IVFVPGVV 93 (388)
T ss_pred CcceeeeecccCCCCHHHHHHHHHHHhcC-CCCCCCC----CHHHHHHH----HHHHHHhcCCCCCcce---EEEcCcch
Confidence 345554442 2 35899999999887653 2466632 11233333 33444544432 1233 4444 557
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE
Q 015609 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv 307 (403)
.++..++.++.+|||.|++..+.|.... +.+...++.+...++.-+.....||+++||+.+.+.++|+.++
T Consensus 94 pgi~~~I~~~T~~gd~Vvi~tPvY~PF~---------~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iL 164 (388)
T COG1168 94 PGISLAIRALTKPGDGVVIQTPVYPPFY---------NAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFIL 164 (388)
T ss_pred HhHHHHHHHhCcCCCeeEecCCCchHHH---------HHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEE
Confidence 8999999999999999999887663321 3455556543333333232234589999999998877787665
Q ss_pred eCC-C-CCccc---cHHHHHHHHHHcCCEEEEeccccccccccccccCCC---C--ccc--EEEEcCcCCC--cCCceEE
Q 015609 308 GGS-S-YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---D--YCD--IVTSTTHKSL--RGPRGGI 373 (403)
Q Consensus 308 ~~s-~-~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~--~aD--ivt~StHKtL--~GP~GG~ 373 (403)
+.+ | .|+++ .+.+|.+||.+||+.+|.|..|+- ++..|....|+ . .+| +.+++..|+| .|-+.+.
T Consensus 165 CnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaD-lv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~ 243 (388)
T COG1168 165 CNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHAD-LVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAY 243 (388)
T ss_pred eCCCCCCCccccHHHHHHHHHHHHHcCCEEEeeccccc-ccccCCCccchhhcChhhhcceEEEeeccccccchhhhhee
Confidence 543 3 56666 577888999999999999999975 33333111222 1 245 5567889997 5666666
Q ss_pred EEEeCCC---CCcccCCCcccCCcceee
Q 015609 374 IFFRRGK---KPRKQGIPLNHGDVVVIM 398 (403)
Q Consensus 374 I~~~~~~---~~~~~~~p~~qGg~~~~s 398 (403)
++..+++ +..+.+.-..+++-+.++
T Consensus 244 ~Ii~n~~lr~~~~~~l~~~~~~~~n~lg 271 (388)
T COG1168 244 IIISNRELRAKFLKRLKRNGLHGPSALG 271 (388)
T ss_pred EEecCHHHHHHHHHHHHHhcCCCCchHH
Confidence 6655432 222333334445555443
No 205
>PRK07505 hypothetical protein; Provisional
Probab=99.16 E-value=1.9e-09 Score=110.05 Aligned_cols=197 Identities=17% Similarity=0.167 Sum_probs=115.0
Q ss_pred ccceeccCccC----cHHHHHHHHHHhhhcCC-CCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015609 153 GIELIASENFV----CRAVMEALGSHLTNKYS-EGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 153 ~l~LiaSen~~----~p~V~eA~~s~l~~~y~-eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
.|.+.. .+++ +|+|++|+...+. ++. .+..+++.....+ ..+ ..+++++++++. . .++++||+
T Consensus 48 ~ld~~s-~~~lgl~~~p~v~~A~~~~l~-~~g~~~~~~~~~~~~~~---~~~-~l~~~la~~~~~-~-----~~~~~sG~ 115 (402)
T PRK07505 48 FVNFVS-CSYLGLDTHPAIIEGAVDALK-RTGSLHLSSSRTRVRSQ---ILK-DLEEALSELFGA-S-----VLTFTSCS 115 (402)
T ss_pred EEEeec-CCccCCCCCHHHHHHHHHHHH-HhCCCCCCccchhhhhH---HHH-HHHHHHHHHhCC-C-----EEEECChH
Confidence 355543 4565 8999999998775 342 1111121111222 233 345679999987 3 36788999
Q ss_pred HHHHHHHhhhc----cCCC-eEEecC-CCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCC
Q 015609 228 SANFAVYTGLL----LPGD-RIMGLD-SPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYR 301 (403)
Q Consensus 228 ~An~aal~all----~pGD-~VL~~~-~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~ 301 (403)
+|+..++..+. .+|+ .|++.+ ..|++.... ...... ...++.++. .|++++++++.+ +
T Consensus 116 ~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~-------~~~~~~--~~~v~~~~~------~d~~~l~~~~~~-~ 179 (402)
T PRK07505 116 AAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNIL-------KGICAD--ETEVETIDH------NDLDALEDICKT-N 179 (402)
T ss_pred HHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhh-------hhhhhc--CCeEEEeCC------CCHHHHHHHHhc-C
Confidence 99998875432 2233 244443 333321100 011111 123444432 589999998864 3
Q ss_pred CcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccc-ccc--cc--CC--CCcccEEEEcCcCCCcCCceE
Q 015609 302 PKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIA-AKE--LA--SP--FDYCDIVTSTTHKSLRGPRGG 372 (403)
Q Consensus 302 pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia-~g~--~~--~p--~~~aDivt~StHKtL~GP~GG 372 (403)
++++++..++ .|.+.++++|.++|+++|++|++|.+|+.+... .+. .. .. .....+++.|+.|.+.++ ||
T Consensus 180 ~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-Gg 258 (402)
T PRK07505 180 KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-GG 258 (402)
T ss_pred CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-Ce
Confidence 5655544333 467889999999999999999999999764322 111 10 11 112457778999998654 78
Q ss_pred EEEEeC
Q 015609 373 IIFFRR 378 (403)
Q Consensus 373 ~I~~~~ 378 (403)
+++..+
T Consensus 259 ~~~~~~ 264 (402)
T PRK07505 259 VIMLGD 264 (402)
T ss_pred EEEeCC
Confidence 877543
No 206
>PLN02656 tyrosine transaminase
Probab=99.16 E-value=1.8e-09 Score=110.80 Aligned_cols=201 Identities=17% Similarity=0.082 Sum_probs=122.7
Q ss_pred hhcccceeccCc------cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHc----C--CCCCCC
Q 015609 150 QFKGIELIASEN------FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF----D--LDSDNW 217 (403)
Q Consensus 150 q~~~l~LiaSen------~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lf----g--~~~~~~ 217 (403)
.++-|+|-.++. .+++.+++++...+......+|.. ..|.+ + .|+.+++++ | ++++
T Consensus 30 ~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~----lr~~ia~~~~~~~g~~~~~~-- 97 (409)
T PLN02656 30 GKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAP---TVGLP---Q----ARRAIAEYLSRDLPYKLSLD-- 97 (409)
T ss_pred CCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCCCH---H----HHHHHHHHHHHhcCCCCCcc--
Confidence 345677766654 347889999887665422112211 11222 2 233444554 3 3343
Q ss_pred cceEEe-CChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHH
Q 015609 218 GVNVQP-YSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEE 295 (403)
Q Consensus 218 ~v~V~~-~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~ 295 (403)
+|++ +++++|+..++.+++++||+|++....|.... ......| ++++.++++++ +..+|++++++
T Consensus 98 --~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---------~~~~~~g--~~~~~i~~~~~~~~~~d~~~l~~ 164 (409)
T PLN02656 98 --DVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYE---------LCAAFRH--LEVRYVDLLPEKGWEVDLDAVEA 164 (409)
T ss_pred --cEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHH---------HHHHHcC--CEEEEEeCCCcCCCCCCHHHHHH
Confidence 3444 45788999999999999999999987764321 1122333 44556666433 45699999999
Q ss_pred HhccCCCcEEEEeCCCC--Ccc---ccHHHHHHHHHHcCCEEEEeccccccccccccccCCC---Ccc--cEEEEcCcCC
Q 015609 296 KAMDYRPKILICGGSSY--PRE---WDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---DYC--DIVTSTTHKS 365 (403)
Q Consensus 296 ~i~~~~pklViv~~s~~--g~~---~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~~a--Divt~StHKt 365 (403)
++++ ++++|++..+++ |.. .++++|.++|+++|+++++|.++. .+...+....++ +.. =+++.|+.|+
T Consensus 165 ~~~~-~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~ 242 (409)
T PLN02656 165 LADQ-NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYG-HLAFGSNPFVPMGVFGSIVPVLTLGSLSKR 242 (409)
T ss_pred Hhcc-CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhh-hcccCCCCcccHHHhcccCcEEEEcccchh
Confidence 8865 466666554443 444 368899999999999999999965 333222111111 111 1567899998
Q ss_pred C--cCCceEEEEEe
Q 015609 366 L--RGPRGGIIFFR 377 (403)
Q Consensus 366 L--~GP~GG~I~~~ 377 (403)
+ .|-|-|+++..
T Consensus 243 f~~pGlRiG~~i~~ 256 (409)
T PLN02656 243 WIVPGWRLGWFVTT 256 (409)
T ss_pred ccCcceeEEEEEEe
Confidence 5 44556999984
No 207
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.15 E-value=2e-09 Score=107.75 Aligned_cols=146 Identities=15% Similarity=0.063 Sum_probs=97.6
Q ss_pred eEEeCCh-HHHHHHHHhhhccCC---CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHH
Q 015609 220 NVQPYSC-TSANFAVYTGLLLPG---DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLE 294 (403)
Q Consensus 220 ~V~~~SG-T~An~aal~all~pG---D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le 294 (403)
+|++++| ++|+..++.+++++| |+|++..+.|.+.. ..+...| .++++++++++ +..+|+++++
T Consensus 62 ~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~d~~~l~ 130 (350)
T TIGR03537 62 QVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYE---------RGALFAG--GEPTAVKLKKEDGFLLRLEKVE 130 (350)
T ss_pred cEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchH---------HHHHhcC--CEEEEcccCcccCCccCHHHHH
Confidence 4666665 579999999999887 69999887664432 1233334 45666666533 3458999999
Q ss_pred HHhccCCCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCC--CCc-ccEEEEcCcCCC
Q 015609 295 EKAMDYRPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASP--FDY-CDIVTSTTHKSL 366 (403)
Q Consensus 295 ~~i~~~~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p--~~~-aDivt~StHKtL 366 (403)
+++.+ ++|+|++...+ +|...+ +++|.++|+++|+++++|.++...... +..... ++. -.+++.|++|++
T Consensus 131 ~~~~~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~i~~~s~SK~~ 208 (350)
T TIGR03537 131 KSILE-ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFG-EPPHSALEVGIENVLAFHSLSKRS 208 (350)
T ss_pred Hhhhh-ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccC-CCCCchhhcCcCCEEEEeeccccc
Confidence 98865 68888776544 455666 888889999999999999997643221 111110 111 236777999986
Q ss_pred c--CCceEEEEEeC
Q 015609 367 R--GPRGGIIFFRR 378 (403)
Q Consensus 367 ~--GP~GG~I~~~~ 378 (403)
+ |-+.|+++.++
T Consensus 209 g~~GlRiG~~~~~~ 222 (350)
T TIGR03537 209 GMTGYRSGFVAGDE 222 (350)
T ss_pred CCccccceeeecCH
Confidence 3 44558888654
No 208
>PRK07683 aminotransferase A; Validated
Probab=99.15 E-value=4.4e-09 Score=106.92 Aligned_cols=204 Identities=14% Similarity=0.116 Sum_probs=123.8
Q ss_pred cccceeccCc--cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeC-Ch
Q 015609 152 KGIELIASEN--FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DSDNWGVNVQPY-SC 226 (403)
Q Consensus 152 ~~l~LiaSen--~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~~~~~v~V~~~-SG 226 (403)
+.+.|-.+.. +.++.+++++...+.+.+ .+|+.. .|. .++++...+.+.+.+|. +++ .+|+++ ++
T Consensus 29 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-~~Y~~~---~g~---~~lr~~ia~~l~~~~g~~~~~~---~~I~~t~G~ 98 (387)
T PRK07683 29 NLISLTIGQPDFPTPSHVKEAAKRAITENY-TSYTHN---AGL---LELRKAACNFVKDKYDLHYSPE---SEIIVTIGA 98 (387)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CCC---HHHHHHHHHHHHHHhCCCCCCC---CcEEEeCCh
Confidence 3466554432 235778888887765432 122110 122 22332222223222243 332 134444 56
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEE
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILI 306 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklVi 306 (403)
++|+.+++.+++++||+|++....+.++. ..+...| +++++++++.++..+|.+++++.+.+ ++++|+
T Consensus 99 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---------~~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~i~ 166 (387)
T PRK07683 99 SEAIDIAFRTILEPGTEVILPAPIYPGYE---------PIIRLCG--AKPVFIDTRSTGFRLTAEALENAITE-KTRCVV 166 (387)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCccchH---------HHHHHcC--CEEEEeecCcccCCCCHHHHHHhcCc-CceEEE
Confidence 88999999999999999999887654432 1223334 45667777655566899999998864 678887
Q ss_pred EeCCCC--Cccc---cHHHHHHHHHHcCCEEEEeccccccccccccccCCCC------cccEEEEcCcCCCc--CCceEE
Q 015609 307 CGGSSY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD------YCDIVTSTTHKSLR--GPRGGI 373 (403)
Q Consensus 307 v~~s~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~------~aDivt~StHKtL~--GP~GG~ 373 (403)
+...++ |... ++++|.++|+++|+++++|.++...... +.. .++. .-.+++.|+.|.++ |-|-|+
T Consensus 167 i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-~~~-~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~ 244 (387)
T PRK07683 167 LPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYE-QPH-TSIAHFPEMREKTIVINGLSKSHSMTGWRIGF 244 (387)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeC-CCc-CChhhccCCcCCeEEEeeccccccCccceeEE
Confidence 664443 4444 4888899999999999999997753221 111 1111 12477889999873 445599
Q ss_pred EEEeCC
Q 015609 374 IFFRRG 379 (403)
Q Consensus 374 I~~~~~ 379 (403)
++..+.
T Consensus 245 i~~~~~ 250 (387)
T PRK07683 245 LFAPSY 250 (387)
T ss_pred EEcCHH
Confidence 988764
No 209
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.15 E-value=5.4e-09 Score=105.97 Aligned_cols=197 Identities=16% Similarity=0.178 Sum_probs=117.3
Q ss_pred ccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHc-----CCCCCCCcceEEeC-
Q 015609 153 GIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF-----DLDSDNWGVNVQPY- 224 (403)
Q Consensus 153 ~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lf-----g~~~~~~~v~V~~~- 224 (403)
.+.|-.+.+. +++.+.+++....... .+|+. ..|.. + .|+.+++++ +++++ +|+++
T Consensus 32 ~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~Y~~---~~g~~---~----lr~~ia~~~~~~~~~~~~~----~i~~t~ 95 (397)
T PRK07568 32 VYHLNIGQPDIKTPEVFFEAIKNYDEEV--LAYSH---SQGIP---E----LREAFAKYYKKWGIDVEPD----EILITN 95 (397)
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCC--cCcCC---CCCCH---H----HHHHHHHHHHHhCCCCCcc----eEEEcC
Confidence 3555444442 4778888876543211 12211 11221 1 244455555 34553 35444
Q ss_pred ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCC--CCHHHHHHHhccCCC
Q 015609 225 SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGY--IDYEKLEEKAMDYRP 302 (403)
Q Consensus 225 SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~--ID~d~Le~~i~~~~p 302 (403)
++++|+.+++.+++++||+|++....+.... ......| .++++++++.+++. .|++++++++.+ ++
T Consensus 96 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---------~~~~~~g--~~~~~v~~~~~~g~~~~~~~~l~~~~~~-~~ 163 (397)
T PRK07568 96 GGSEAILFAMMAICDPGDEILVPEPFYANYN---------GFATSAG--VKIVPVTTKIEEGFHLPSKEEIEKLITP-KT 163 (397)
T ss_pred ChHHHHHHHHHHhcCCCCEEEEecCCCccHH---------HHHHHcC--CEEEEeecCcccCCCCCCHHHHHHhcCc-cc
Confidence 5788999999999999999999886543221 1122334 34555555433343 368999998864 57
Q ss_pred cEEEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEecccccccccccc-ccCC--CCc-cc--EEEEcCcCCCc--CC
Q 015609 303 KILICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKE-LASP--FDY-CD--IVTSTTHKSLR--GP 369 (403)
Q Consensus 303 klViv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~-~~~p--~~~-aD--ivt~StHKtL~--GP 369 (403)
++|++...+ +|... ++++|.++|+++|+++++|.+..- +...+. .+.. +.. .+ +++.|++|+++ |-
T Consensus 164 ~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~-~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~ 242 (397)
T PRK07568 164 KAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYRE-FVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGA 242 (397)
T ss_pred eEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchh-cccCCCCccChhhcCCCcCCEEEEecchhhccCCCc
Confidence 877665444 35555 588999999999999999998652 322111 1111 111 12 67889999874 55
Q ss_pred ceEEEEEeC
Q 015609 370 RGGIIFFRR 378 (403)
Q Consensus 370 ~GG~I~~~~ 378 (403)
+.|++++.+
T Consensus 243 R~G~~~~~~ 251 (397)
T PRK07568 243 RIGCLISKN 251 (397)
T ss_pred ceEEEecCC
Confidence 669988754
No 210
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.14 E-value=8.2e-10 Score=111.21 Aligned_cols=198 Identities=15% Similarity=0.134 Sum_probs=125.3
Q ss_pred ccceeccCcc--CcHHHHHHHHHHhhhcC--CCCCCCCccccchHHHHHHHHHHHHHHHHHc----C--CCCCCCcceEE
Q 015609 153 GIELIASENF--VCRAVMEALGSHLTNKY--SEGYPGARYYTGNQYIDQIENLCFERALKAF----D--LDSDNWGVNVQ 222 (403)
Q Consensus 153 ~l~LiaSen~--~~p~V~eA~~s~l~~~y--~eG~pgsr~~~G~~~~~~lE~~arerla~lf----g--~~~~~~~v~V~ 222 (403)
.+.|-.+++. .++.+++++...+.... ..+||. .|. .. .|+.+++++ | ++++ +|+
T Consensus 28 ~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~----~g~---~~----lr~aia~~~~~~~~~~~~~~----~I~ 92 (368)
T PRK03317 28 PVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPD----RDA---VA----LRADLAAYLTAQTGVGLTVE----NVW 92 (368)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCC----Cch---HH----HHHHHHHHhhhhccCCCChh----hEE
Confidence 4666666655 47888999877653210 112221 121 12 234455555 3 4553 466
Q ss_pred eCCh-HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCC
Q 015609 223 PYSC-TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYR 301 (403)
Q Consensus 223 ~~SG-T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~ 301 (403)
+++| ++++..++.+++++||.|++..+.|.++.. .....| .+++.++.+ ++..+|++++++++.+.+
T Consensus 93 it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~---------~~~~~g--~~~~~~~~~-~~~~~d~~~l~~~~~~~~ 160 (368)
T PRK03317 93 AANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPI---------IARGTH--TEWVEGPRA-ADFTLDVDAAVAAIAEHR 160 (368)
T ss_pred ECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH---------HHHhcC--CeeEEcccC-CCCCCCHHHHHHHHhccC
Confidence 6655 678999999999999999998876644321 122223 345555444 245799999999997667
Q ss_pred CcEEEEeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC----ccc-EEEEcCcCCCc--CCceE
Q 015609 302 PKILICGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD----YCD-IVTSTTHKSLR--GPRGG 372 (403)
Q Consensus 302 pklViv~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~----~aD-ivt~StHKtL~--GP~GG 372 (403)
+|+|++...+ +|...+.+++.++|+.+++++++|.+|.- +...+. +..+. +-+ +++.|+.|+++ |-+-|
T Consensus 161 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~-~~~~~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG 238 (368)
T PRK03317 161 PDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAE-FRRSGT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLG 238 (368)
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchh-hcccCC-cCHHHHHHhCCCEEEEEechhhhccchhhhh
Confidence 8887766544 46789999999999999999999999873 221111 11111 123 56779999874 33448
Q ss_pred EEEEeCC
Q 015609 373 IIFFRRG 379 (403)
Q Consensus 373 ~I~~~~~ 379 (403)
+++.+++
T Consensus 239 ~~~~~~~ 245 (368)
T PRK03317 239 YLAAAPA 245 (368)
T ss_pred hhhCCHH
Confidence 8887654
No 211
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.14 E-value=9e-09 Score=104.15 Aligned_cols=207 Identities=15% Similarity=0.124 Sum_probs=121.0
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCC-h
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DSDNWGVNVQPYS-C 226 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~~~~~v~V~~~S-G 226 (403)
+.+.|-.+++. .++.+.+++...+.......|+. ..|.. ++-+...+.+.+.+|. +++ -+|++++ +
T Consensus 32 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~aia~~~~~~~g~~~~~~---~~ii~t~G~ 102 (385)
T PRK09276 32 DVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPS---YEGML---EFRKAVADWYKRRFGVELDPE---TEVISLIGS 102 (385)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCcH---HHHHHHHHHHHHHhCCCCCCC---CcEEEccCc
Confidence 34666655543 46788888876654211111211 12321 1211112223333353 332 1366654 5
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHHHHHHHhccCCCcEE
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d~Le~~i~~~~pklV 305 (403)
++|+..++.+++++||+|++....+.... ......| .+++.++.+.++ ..+|++++++.+.. ++++|
T Consensus 103 ~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~---------~~~~~~g--~~~~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v 170 (385)
T PRK09276 103 KEGIAHIPLAFVNPGDVVLVPDPGYPVYK---------IGTIFAG--GEPYFMPLKEENGFLPDLDAIPEDVAK-KAKLM 170 (385)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcChH---------HHHHHcC--CEEEEEecCCCCCCcCCHHHHHHhccc-cceEE
Confidence 68999999999999999999987764432 1122334 345555665433 45899999888764 68888
Q ss_pred EEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CCC---cccEEEEcCcCCCc--CCceEE
Q 015609 306 ICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFD---YCDIVTSTTHKSLR--GPRGGI 373 (403)
Q Consensus 306 iv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~---~aDivt~StHKtL~--GP~GG~ 373 (403)
++..+++ |...+ +++|.++|+++|+++++|.++.-........+. .++ ...+++.|+.|.++ |-|-|+
T Consensus 171 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 250 (385)
T PRK09276 171 FINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGF 250 (385)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhhee
Confidence 7764444 55666 578888899999999999997643221111111 111 13477889999863 333499
Q ss_pred EEEeCC
Q 015609 374 IFFRRG 379 (403)
Q Consensus 374 I~~~~~ 379 (403)
++.++.
T Consensus 251 ~i~~~~ 256 (385)
T PRK09276 251 AVGNAD 256 (385)
T ss_pred eeCCHH
Confidence 987653
No 212
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.13 E-value=9e-10 Score=123.78 Aligned_cols=213 Identities=14% Similarity=0.107 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHhhhcccceecc---CccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCC
Q 015609 138 EIFDIMEKEKQRQFKGIELIAS---ENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDS 214 (403)
Q Consensus 138 ei~~li~~e~~rq~~~l~LiaS---en~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~ 214 (403)
|+...+++=..+++...+++.. ..++++.|++++.+.... |..-.|+..-. ..-..+.|.+ .+..+++|.|++.
T Consensus 89 e~~~~~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~-~TaytPYqaEi-sQG~lqal~~-~Qt~ia~LtG~~~ 165 (993)
T PLN02414 89 QMLEHMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGW-YTQYTPYQAEI-AQGRLESLLN-YQTMITDLTGLPM 165 (993)
T ss_pred HHHHHHHHHHhcCCccccccCCCCCCccCCHHHHHHHHhChHH-HhhcCCCchHH-HHHHHHHHHH-HHHHHHHHhCCCh
Confidence 5555444433333333444432 223788887887765431 21112222110 0112334444 5888999999998
Q ss_pred CCCcceEEeC-ChHHHHHHHHhhh-ccCC--CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCH
Q 015609 215 DNWGVNVQPY-SCTSANFAVYTGL-LLPG--DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDY 290 (403)
Q Consensus 215 ~~~~v~V~~~-SGT~An~aal~al-l~pG--D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~ 290 (403)
+ ++.++ ++|.+..++++++ +++| |+|++++.+|++.+... +. ...+.+++++.++++. .|
T Consensus 166 a----naSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~------~t-~a~~~GieV~~v~~~~----~~- 229 (993)
T PLN02414 166 S----NASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVC------QT-RADGLGLEVVVADEKD----FD- 229 (993)
T ss_pred h----hEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHH------HH-hhhhcCCEEEEecchh----hc-
Confidence 5 56655 6788888888777 5544 78999998876654211 01 1112334555444321 11
Q ss_pred HHHHHHhccCCCcEEEEe-CCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCC--
Q 015609 291 EKLEEKAMDYRPKILICG-GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSL-- 366 (403)
Q Consensus 291 d~Le~~i~~~~pklViv~-~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL-- 366 (403)
...+ ....+++. .+.+|.+.|+++|+++||++|+++++ ++|.+|+.... .|-+ +|||+++++|||+
T Consensus 230 -----~~~~-~v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~---~pge~GADi~vgsgqKwg~P 299 (993)
T PLN02414 230 -----YSSG-DVCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLK---PPGEWGADIVVGSAQRFGVP 299 (993)
T ss_pred -----cccC-ceEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCC---CHhhccCcEEEECCCccccC
Confidence 0111 12123333 45678899999999999999999999 99988876421 1222 4999999999998
Q ss_pred ---cCCceEEEEEeCC
Q 015609 367 ---RGPRGGIIFFRRG 379 (403)
Q Consensus 367 ---~GP~GG~I~~~~~ 379 (403)
+||..|++++++.
T Consensus 300 ~G~GGP~aGflavr~~ 315 (993)
T PLN02414 300 MGYGGPHAAFLATSQE 315 (993)
T ss_pred CCCCCCCeeEEEECHH
Confidence 6777799999875
No 213
>PRK07682 hypothetical protein; Validated
Probab=99.13 E-value=4.4e-09 Score=106.15 Aligned_cols=205 Identities=16% Similarity=0.115 Sum_probs=122.6
Q ss_pred cccceeccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeC-Ch
Q 015609 152 KGIELIASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DSDNWGVNVQPY-SC 226 (403)
Q Consensus 152 ~~l~LiaSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~~~~~v~V~~~-SG 226 (403)
..|.|-.+++.. ++.+.+++...+...+ .+|+.. .|.. .+.+...+++.+.+|. ++++ +|.++ ++
T Consensus 21 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~---~g~~---~lr~~ia~~~~~~~g~~~~~~~---~i~~t~G~ 90 (378)
T PRK07682 21 GVISLGVGEPDFVTPWNVREASIRSLEQGY-TSYTAN---AGLL---ELRQEIAKYLKKRFAVSYDPND---EIIVTVGA 90 (378)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CCcH---HHHHHHHHHHHHHhCCCCCCCC---cEEEeCCh
Confidence 457777666543 5566777766544221 122111 1222 2222222334444444 2221 35555 46
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHHHHHhccCCCcEE
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~Le~~i~~~~pklV 305 (403)
++|+.+++.++++|||+|++....|.... ..+...|. .++.++++. ++..+|++++++++.+ ++++|
T Consensus 91 ~~al~~~~~~l~~~gd~vl~~~p~y~~~~---------~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v 158 (378)
T PRK07682 91 SQALDVAMRAIINPGDEVLIVEPSFVSYA---------PLVTLAGG--VPVPVATTLENEFKVQPAQIEAAITA-KTKAI 158 (378)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCchhhH---------HHHHHcCC--EEEEeecCCccCCCCCHHHHHhhcCc-ccEEE
Confidence 88999999999999999999987764321 12233343 445555543 2457999999998864 67877
Q ss_pred EEeCCCC--Cccc---cHHHHHHHHHHcCCEEEEecccccccccccccc-----CCCCcccEEEEcCcCCCc--CCceEE
Q 015609 306 ICGGSSY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELA-----SPFDYCDIVTSTTHKSLR--GPRGGI 373 (403)
Q Consensus 306 iv~~s~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~-----~p~~~aDivt~StHKtL~--GP~GG~ 373 (403)
++...++ |..+ ++++|.++|+++++++++|.++...... +... .+...-.+++.|+.|+|+ |-|-|+
T Consensus 159 ~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ 237 (378)
T PRK07682 159 LLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYD-EAYTSFASIKGMRERTILISGFSKGFAMTGWRLGF 237 (378)
T ss_pred EEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccC-CCCCChhhcccccCCEEEEecCcccccChhhhhhh
Confidence 6654443 4444 5888999999999999999997643321 1110 011123478889999874 333499
Q ss_pred EEEeCC
Q 015609 374 IFFRRG 379 (403)
Q Consensus 374 I~~~~~ 379 (403)
++.+++
T Consensus 238 ~~~~~~ 243 (378)
T PRK07682 238 IAAPVY 243 (378)
T ss_pred hhcCHH
Confidence 988664
No 214
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.12 E-value=1.9e-09 Score=109.37 Aligned_cols=197 Identities=15% Similarity=0.121 Sum_probs=120.6
Q ss_pred cCccCcHHHHHHHHHHhhhcCCCCCCCCccc-cchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh
Q 015609 159 SENFVCRAVMEALGSHLTNKYSEGYPGARYY-TGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL 237 (403)
Q Consensus 159 Sen~~~p~V~eA~~s~l~~~y~eG~pgsr~~-~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al 237 (403)
+-+..++++++++...+. .|.+ - .++ ........+-. ..+.++.+++++. .++++..+.|..+++.++
T Consensus 35 G~s~~~~e~iea~~~~~~-~~v~--L--e~~l~~g~~~~R~~~-~~~~~~~~~~aea-----~~ivnnn~aAVll~~~al 103 (395)
T COG1921 35 GRSLYSPEAIEAMKEAMR-APVE--L--ETDLKTGKRGARLTE-LAELLCGLTGAEA-----AAIVNNNAAAVLLTLNAL 103 (395)
T ss_pred CCccCCHHHHHHHHHHhc-ccce--e--eeecccchhhHHHHH-HHHHHhcccchhh-----eeeECCcHHHHHHHHhhh
Confidence 566779999999886654 3321 1 111 11122222222 2334556666665 345667788888888888
Q ss_pred ccCCCeEEec--CCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEE-EEeCCCCCc
Q 015609 238 LLPGDRIMGL--DSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKIL-ICGGSSYPR 314 (403)
Q Consensus 238 l~pGD~VL~~--~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklV-iv~~s~~g~ 314 (403)
..++..|+.. ..+ |||+... ..+...|. +++.++ .+..-...+++.+|.++ ++++ -+..++|+.
T Consensus 104 ~~~~EvVis~g~lV~-gg~~~v~------d~~~~aG~--~l~EvG---~tn~t~~~d~~~AIne~-ta~llkV~s~~~~f 170 (395)
T COG1921 104 AEGKEVVVSRGELVE-GGAFRVP------DIIRLAGA--KLVEVG---TTNRTHLKDYELAINEN-TALLLKVHSSNYGF 170 (395)
T ss_pred ccCCeEEEEcccccc-CCCCChh------HHHHHcCC--EEEEec---ccCcCCHHHHHHHhccC-CeeEEEEeeccccc
Confidence 7755444432 122 5655322 22344554 334433 24556788888899874 5554 455667764
Q ss_pred --cccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcCCceEEEEEeCC
Q 015609 315 --EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 315 --~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~GP~GG~I~~~~~ 379 (403)
..+.+++.+|||++|+++++|.+-..-.-.....+.-+. ++|+|++|++|.|.||++|+|+.+++
T Consensus 171 ~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkKe 238 (395)
T COG1921 171 TGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKKE 238 (395)
T ss_pred cccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCccceEechHH
Confidence 457888999999999999999963221000000111112 49999999999999999999999986
No 215
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.11 E-value=4.8e-09 Score=107.59 Aligned_cols=213 Identities=19% Similarity=0.200 Sum_probs=128.0
Q ss_pred CChHHHHHHHHHHHhhhcccceeccCc------cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHH
Q 015609 135 ADPEIFDIMEKEKQRQFKGIELIASEN------FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALK 208 (403)
Q Consensus 135 ~d~ei~~li~~e~~rq~~~l~LiaSen------~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~ 208 (403)
+.+.+.++++. ......|.|..+.- +.++.+++++...+......+|+.. .|.. + .|+.+++
T Consensus 19 ~~~~~~~~~~~--~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~---~G~~---~----Lr~aia~ 86 (412)
T PTZ00433 19 LRTVTDNAKPS--PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPT---VGSP---E----AREAVAT 86 (412)
T ss_pred HHHHHHhhccC--CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCC---CCcH---H----HHHHHHH
Confidence 33445554432 23445567665432 3578889988776543111122211 1221 1 2334555
Q ss_pred HcC------------CCCCCCcceEEeC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceE
Q 015609 209 AFD------------LDSDNWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFE 275 (403)
Q Consensus 209 lfg------------~~~~~~~v~V~~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~ 275 (403)
+++ ++++ +|+.+ ++++|+..++.+++++||+|++..+.|.... ......| .+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~----~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~---------~~~~~~g--~~ 151 (412)
T PTZ00433 87 YWRNSFVHKESLKSTIKKD----NVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYE---------TVCKAYG--IE 151 (412)
T ss_pred HHHhhccccccccCCCChh----hEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHH---------HHHHHcC--CE
Confidence 543 3343 35555 5678999999999999999999987764432 1223334 34
Q ss_pred EeeeecCCC-CCCCCHHHHHHHhccCCCcEEEEeCCCC--Cccc---cHHHHHHHHHHcCCEEEEecccccccccccc-c
Q 015609 276 SFPYKVNPQ-TGYIDYEKLEEKAMDYRPKILICGGSSY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKE-L 348 (403)
Q Consensus 276 vv~~~vd~~-~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~-~ 348 (403)
++.++++++ ++.+|+++|++++.. ++++|++...++ |... ++++|.++|+++|+++++|.++. .++..+. .
T Consensus 152 ~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~ 229 (412)
T PTZ00433 152 MRFYNCRPEKDWEADLDEIRRLVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYA-GMVFNGATF 229 (412)
T ss_pred EEEEecCccccCcCCHHHHHHHhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccc-ccccCCCCc
Confidence 555555432 457999999988865 678887755444 4444 57888899999999999999975 3332221 1
Q ss_pred cC--CCC-c-ccEEEEcCcCCC--cCCceEEEEE
Q 015609 349 AS--PFD-Y-CDIVTSTTHKSL--RGPRGGIIFF 376 (403)
Q Consensus 349 ~~--p~~-~-aDivt~StHKtL--~GP~GG~I~~ 376 (403)
+. .+. . .-+++.|+.|++ .|-|-|+++.
T Consensus 230 ~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~ 263 (412)
T PTZ00433 230 TSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLL 263 (412)
T ss_pred cchhhccCCCceEEEccchhhcCCCCeeEEEEEE
Confidence 11 111 1 126678999986 4556699987
No 216
>PLN02187 rooty/superroot1
Probab=99.11 E-value=3.7e-09 Score=110.53 Aligned_cols=201 Identities=14% Similarity=0.143 Sum_probs=120.0
Q ss_pred hcccceeccCc-----c-CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC------CCCCCCc
Q 015609 151 FKGIELIASEN-----F-VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD------LDSDNWG 218 (403)
Q Consensus 151 ~~~l~LiaSen-----~-~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg------~~~~~~~ 218 (403)
+.-|.|--++. + .++.+.+++...+.... ++.+.. ..|.. . .|+.++++++ ++++
T Consensus 66 ~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~--~~~Y~~-~~G~~---~----lR~aiA~~~~~~~~~~~~~~--- 132 (462)
T PLN02187 66 KTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGK--GNSYGP-GAGIL---P----ARRAVADYMNRDLPHKLTPE--- 132 (462)
T ss_pred CCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCC--CCCCCC-CCChH---H----HHHHHHHHHHHhcCCCCCcc---
Confidence 34466554422 2 35678888776654321 111111 12321 1 3445555553 4554
Q ss_pred ceEEeC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHHHHH
Q 015609 219 VNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKLEEK 296 (403)
Q Consensus 219 v~V~~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~Le~~ 296 (403)
+|+++ ++++|+..++.++++|||+|++..+.+.+.. ..+...|. +++.++..+ ++..+|+++|+++
T Consensus 133 -~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~---------~~~~~~g~--~~~~~~l~~~~~~~~d~~~l~~~ 200 (462)
T PLN02187 133 -DIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYD---------ARAAYSGL--EVRKFDLLPEKEWEIDLEGIEAI 200 (462)
T ss_pred -cEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHH---------HHHHHcCC--EEEEEeCccccCCccCHHHHHHh
Confidence 45555 5678999999999999999999988765432 11233343 445554432 2467999999998
Q ss_pred hccCCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCCC-c---cc-EEEEcCcCCC
Q 015609 297 AMDYRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-Y---CD-IVTSTTHKSL 366 (403)
Q Consensus 297 i~~~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~---aD-ivt~StHKtL 366 (403)
++. ++++|++..+++ |.+++ +++|.++|+++|+++++|.++.- ++..+....++. . .. +++.|+.|++
T Consensus 201 ~~~-~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~-l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f 278 (462)
T PLN02187 201 ADE-NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDR-TIFGDNPFVSMGKFASIVPVLTLAGISKGW 278 (462)
T ss_pred cCC-CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccc-cccCCCCceeHHHhccCCcEEEEecchhhc
Confidence 864 466665554444 55555 78888899999999999998653 222111111121 1 11 5667999985
Q ss_pred --cCCceEEEEEeC
Q 015609 367 --RGPRGGIIFFRR 378 (403)
Q Consensus 367 --~GP~GG~I~~~~ 378 (403)
.|-|-|+++..+
T Consensus 279 ~~pGlRiG~~v~~~ 292 (462)
T PLN02187 279 VVPGWKIGWIALND 292 (462)
T ss_pred CCccceeEEEEecC
Confidence 455669999854
No 217
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.11 E-value=1.7e-08 Score=103.97 Aligned_cols=204 Identities=14% Similarity=0.076 Sum_probs=124.7
Q ss_pred ccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC---CCCCCcceEEeCCh-
Q 015609 153 GIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL---DSDNWGVNVQPYSC- 226 (403)
Q Consensus 153 ~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~---~~~~~~v~V~~~SG- 226 (403)
.+.|..+++. .++.+++++...+......+|+. .|.. .+-+...+.+.+.+|. +++ -+|+.++|
T Consensus 46 ~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~----~G~~---~lr~aia~~~~~~~g~~~~~~~---~~I~it~Gs 115 (410)
T PRK06290 46 LIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD----NGIQ---EFKEAAARYMEKVFGVKDIDPV---TEVIHSIGS 115 (410)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC----CCcH---HHHHHHHHHHHHHcCCCcCCCc---ceEEEccCH
Confidence 4667666555 47778887765443211112221 2332 2222222233333453 332 14666665
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccCCCcEE
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~~pklV 305 (403)
++|+..++.+++++||+|++..+.|.+... .+...| .+++.++++++ +..+|++++++.+.. ++|+|
T Consensus 116 ~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~---------~~~~~g--~~v~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i 183 (410)
T PRK06290 116 KPALAMLPSCFINPGDVTLMTVPGYPVTGT---------HTKYYG--GEVYNLPLLEENNFLPDLDSIPKDIKE-KAKLL 183 (410)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCCccHHH---------HHHHcC--CEEEEEecCCCcCCcCCHHHHHHhhcc-cceEE
Confidence 578889999999999999999877644321 123333 45666677643 346799999988864 68988
Q ss_pred EEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CCC---cccEEEEcCcCCC--cCCceEE
Q 015609 306 ICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFD---YCDIVTSTTHKSL--RGPRGGI 373 (403)
Q Consensus 306 iv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~---~aDivt~StHKtL--~GP~GG~ 373 (403)
++..+++ |.+.+ +++|.++|+++|++|++|.++.-... .+.... .+. ..++++.|+.|++ .|-|-|+
T Consensus 184 ~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~-~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ 262 (410)
T PRK06290 184 YLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTF-DGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAF 262 (410)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhcee-CCCCcChhcCCCccccEEEEeechhhcCCchhheEe
Confidence 8774454 56666 56777889999999999999774322 111111 111 2468899999997 3445599
Q ss_pred EEEeCC
Q 015609 374 IFFRRG 379 (403)
Q Consensus 374 I~~~~~ 379 (403)
++.+++
T Consensus 263 ii~~~~ 268 (410)
T PRK06290 263 VVGNEL 268 (410)
T ss_pred EEeCHH
Confidence 987653
No 218
>PRK03321 putative aminotransferase; Provisional
Probab=99.11 E-value=9.6e-10 Score=109.81 Aligned_cols=196 Identities=14% Similarity=0.129 Sum_probs=124.6
Q ss_pred ccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH-HH
Q 015609 153 GIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT-SA 229 (403)
Q Consensus 153 ~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT-~A 229 (403)
.|.|-.+++. .++.|++++...+.. . ..||. .| .+ ..|+.++++++++++ +|++++|+ ++
T Consensus 24 ~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~----~g------~~-~lr~~ia~~~~~~~~----~I~~~~G~~~~ 86 (352)
T PRK03321 24 AIKLSSNETPFGPLPSVRAAIARAAAG-V-NRYPD----MG------AV-ELRAALAEHLGVPPE----HVAVGCGSVAL 86 (352)
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHh-c-CcCCC----Cc------HH-HHHHHHHHHhCcCHH----HEEECCCHHHH
Confidence 3555555443 467899998876542 1 12321 12 12 246678999998764 46666665 56
Q ss_pred HHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015609 230 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 230 n~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
+..++.++++|||+|++....+.... ..+...| .+++.++.++ ++.+|+++++++++. ++++|++..
T Consensus 87 l~~~~~~~~~~gd~Vli~~p~y~~~~---------~~~~~~g--~~~~~v~~~~-~~~~~~~~l~~~~~~-~~~~v~l~~ 153 (352)
T PRK03321 87 CQQLVQATAGPGDEVIFAWRSFEAYP---------ILVQVAG--ATPVQVPLTP-DHTHDLDAMAAAITD-RTRLIFVCN 153 (352)
T ss_pred HHHHHHHhcCCCCEEEeCCCCHHHHH---------HHHHHcC--CEEEEccCCC-CCCCCHHHHHHhhcc-CCCEEEEeC
Confidence 77777888999999998765432210 0122333 3556666654 367999999998864 688887754
Q ss_pred CC--CCccccHHHHHHHHHH--cCCEEEEeccccccccccccccCCCC----ccc-EEEEcCcCCCc--CCceEEEEEeC
Q 015609 310 SS--YPREWDYGRFRQIADK--CGAVLMCDMAHISGLIAAKELASPFD----YCD-IVTSTTHKSLR--GPRGGIIFFRR 378 (403)
Q Consensus 310 s~--~g~~~Di~~I~~Iake--~Ga~LivDaAh~~Glia~g~~~~p~~----~aD-ivt~StHKtL~--GP~GG~I~~~~ 378 (403)
.+ +|...|.++|.++|+. +++++++|.++.-- ...+..+.++. .-+ +++.|+.|.|+ |-|.|++++++
T Consensus 154 p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 232 (352)
T PRK03321 154 PNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEY-VRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP 232 (352)
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHh-ccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH
Confidence 44 4678899999999987 59999999997632 22111111111 123 55679999874 44459998865
Q ss_pred C
Q 015609 379 G 379 (403)
Q Consensus 379 ~ 379 (403)
.
T Consensus 233 ~ 233 (352)
T PRK03321 233 E 233 (352)
T ss_pred H
Confidence 3
No 219
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.10 E-value=6.2e-09 Score=106.83 Aligned_cols=201 Identities=13% Similarity=0.080 Sum_probs=120.6
Q ss_pred hhcccceeccCc------cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHc------CCCCCCC
Q 015609 150 QFKGIELIASEN------FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF------DLDSDNW 217 (403)
Q Consensus 150 q~~~l~LiaSen------~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lf------g~~~~~~ 217 (403)
+++.|.|--++- ..++.+++++...+......+|.. ..|... .|+.+++++ +++++
T Consensus 31 ~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~---~~G~~~-------lr~aia~~~~~~~g~~~~~~-- 98 (409)
T PLN00143 31 HRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAP---TGGILP-------ARRAIADYLSNDLPYQLSPD-- 98 (409)
T ss_pred CCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCC---CCCCHH-------HHHHHHHHHHhhcCCCCCHh--
Confidence 445566655433 468888888877654321111210 123321 233344444 34443
Q ss_pred cceEEeC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHHHH
Q 015609 218 GVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKLEE 295 (403)
Q Consensus 218 ~v~V~~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~Le~ 295 (403)
+|+++ ++++|+..++.+++++||+|++....+.+... .....| .+++.++.++ ++..+|+++|++
T Consensus 99 --~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~---------~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~ 165 (409)
T PLN00143 99 --DVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVET---------YAIFHH--LEIRHFDLLPEKGWEVDLDAVEA 165 (409)
T ss_pred --hEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHH---------HHHHcC--CEEEEEeccCCCCCcCCHHHHHH
Confidence 35555 56789999999999999999999877654321 123334 3455555532 234699999998
Q ss_pred HhccCCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC---Ccc-c-EEEEcCcCC
Q 015609 296 KAMDYRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---DYC-D-IVTSTTHKS 365 (403)
Q Consensus 296 ~i~~~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~~a-D-ivt~StHKt 365 (403)
++.. +++++++..+++ |...+ +++|.++|+++++++++|.++. .+...+....++ ... . +++.|+.|+
T Consensus 166 ~~~~-~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~ 243 (409)
T PLN00143 166 IADE-NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYG-HIVFGSKPFVPMGLFASIVPVITLGSISKR 243 (409)
T ss_pred hccc-CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEcccc-ccccCCCCCcchhhhcccCcEEEEccchhh
Confidence 8864 456555543444 56665 6777888999999999999865 232222111121 111 1 677899998
Q ss_pred C--cCCceEEEEEe
Q 015609 366 L--RGPRGGIIFFR 377 (403)
Q Consensus 366 L--~GP~GG~I~~~ 377 (403)
+ .|-|-|++++.
T Consensus 244 f~~pGlRvG~~v~~ 257 (409)
T PLN00143 244 WMIPGWGLGWLVTC 257 (409)
T ss_pred cCCCccceEEEEee
Confidence 4 55566999984
No 220
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.08 E-value=2.3e-09 Score=106.90 Aligned_cols=193 Identities=16% Similarity=0.085 Sum_probs=124.6
Q ss_pred cccceeccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC-hHH
Q 015609 152 KGIELIASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYS-CTS 228 (403)
Q Consensus 152 ~~l~LiaSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~S-GT~ 228 (403)
+.|.|-.+++.. ++.+++++...+.... ..||.. | .+ ..|+.++++++++++ +|++++ +++
T Consensus 25 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~~----~------~~-~lr~aia~~~~~~~~----~I~it~G~~~ 88 (353)
T PRK05387 25 KLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPDP----N------AD-ALRQAIAAYYGLDPE----QVFVGNGSDE 88 (353)
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCCC----c------HH-HHHHHHHHHhCCCHH----HEEEcCCHHH
Confidence 457777766654 6788998876554211 122211 1 11 256779999998875 455554 667
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe
Q 015609 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~ 308 (403)
|+..++.+++++||+|++..+.|.... ......| .+++.+++++ ++.+|++++++ ..++|++.
T Consensus 89 al~~~~~~l~~~gd~vlv~~P~y~~~~---------~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~-----~~~~v~~~ 151 (353)
T PRK05387 89 VLAHAFLAFFNHDRPLLFPDITYSFYP---------VYAGLYG--IPYEEIPLDD-DFSIDVEDYLR-----PNGGIIFP 151 (353)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCHHHHH---------HHHHHcC--CEEEEeecCC-CCCCCHHHHHh-----cCCEEEEe
Confidence 999999999999999999887653221 1123334 3455666653 56799998863 23555554
Q ss_pred CCC--CCccccHHHHHHHHHHc-CCEEEEeccccccccccccccCCCC--cccEEEEcCcCCC--cCCceEEEEEeCC
Q 015609 309 GSS--YPREWDYGRFRQIADKC-GAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 309 ~s~--~g~~~Di~~I~~Iake~-Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL--~GP~GG~I~~~~~ 379 (403)
..+ +|...+.+++.+|++.+ ++++++|.++.- + ........++ .-.+++.|++|++ .|.+-|+++.+++
T Consensus 152 ~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~-~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~ 227 (353)
T PRK05387 152 NPNAPTGIALPLAEIERILAANPDSVVVIDEAYVD-F-GGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPE 227 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccc-c-CCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHH
Confidence 444 56789999999999876 999999999742 1 1110000011 1358899999986 4666699987653
No 221
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.08 E-value=4.7e-09 Score=106.92 Aligned_cols=191 Identities=12% Similarity=0.033 Sum_probs=112.5
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc----
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL---- 239 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~---- 239 (403)
.|.|.+++...+.. +..+. +.+. .+...++|+ +++++++.+. .++++|||+|+.+++..+..
T Consensus 59 ~~~i~~a~~~~~~~-~~~~~---~~~~-~~~~~~l~~----~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~~ 124 (401)
T PRK00854 59 HPKILAAMVEQAGR-LTLTS---RAFR-NDQLAPLYE----ELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGYE 124 (401)
T ss_pred CHHHHHHHHHHHhh-ccccc---cccC-CHHHHHHHH----HHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHHh
Confidence 78888887776643 32111 1111 233444443 5888888754 46788999999999988742
Q ss_pred -----CC-CeEEecCCCCCccccccccCCccchhhh--cc-cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC
Q 015609 240 -----PG-DRIMGLDSPSGGHLSHGYHTPGGKKVSA--AS-IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310 (403)
Q Consensus 240 -----pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~--~g-~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s 310 (403)
+| ++|++....+.|... +.+.-.+.+... .+ ....+..++ ..|++++++++.+ ++++|+++..
T Consensus 125 ~~g~~~~~~~vi~~~~~~HG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~i~~-~~~aii~e~~ 196 (401)
T PRK00854 125 VKGVPEGQAEIIVCADNFHGRTL-SIVGFSTDPDARGGFGPFTPGFRVVP------FGDAEALEAAITP-NTVAFLVEPI 196 (401)
T ss_pred ccCCCCCCceEEEECCCcCCccH-HHHhccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCC-CeEEEEEccc
Confidence 23 678877655433211 000000000000 00 000111111 3589999999864 6788888754
Q ss_pred C--CCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCCCcCC--ceEEEEEeCC
Q 015609 311 S--YPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 311 ~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKtL~GP--~GG~I~~~~~ 379 (403)
. .|.+.+ +++|+++|+++|+++++|.+|. |+...|.. ....+ ..|+++++ |+|.|- +.|+++++++
T Consensus 197 ~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~~ 273 (401)
T PRK00854 197 QGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNSE 273 (401)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcHH
Confidence 3 355554 9999999999999999999997 43222211 01111 26888875 998653 4678888765
No 222
>PRK08068 transaminase; Reviewed
Probab=99.07 E-value=2.2e-08 Score=101.62 Aligned_cols=207 Identities=17% Similarity=0.119 Sum_probs=120.3
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeC-C
Q 015609 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPY-S 225 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~-S 225 (403)
.+-|.|-.++.. .++.+.+++...+.......|+. ..|. .++.+...+.+.+-+| ++++ -+|..+ +
T Consensus 32 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~---~~lr~aia~~~~~~~g~~~~~~---~~i~it~G 102 (389)
T PRK08068 32 HDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSP---FRGY---PFLKEAAADFYKREYGVTLDPE---TEVAILFG 102 (389)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCC---HHHHHHHHHHHHHHhCCCCCCC---ccEEEcCC
Confidence 344666554322 25678888776554321111211 1222 2222222222333335 3332 134444 5
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccCCCcE
Q 015609 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~~pkl 304 (403)
+++++..++.+++++||+|++..+.+..... .+...| .+++.++++++ +..+|++++++.+.. ++++
T Consensus 103 ~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~---------~~~~~g--~~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~ 170 (389)
T PRK08068 103 GKAGLVELPQCLMNPGDTILVPDPGYPDYLS---------GVALAR--AQFETMPLIAENNFLPDYTKIPEEVAE-KAKL 170 (389)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHhcC--CEEEEeecccccCCCCCHHHHHHhccc-cceE
Confidence 6688888889999999999999887654321 223344 45566666644 346899999988864 6888
Q ss_pred EEEeCCCC--CccccH---HHHHHHHHHcCCEEEEeccccccccccccccCC-C---C--cccEEEEcCcCCC--cCCce
Q 015609 305 LICGGSSY--PREWDY---GRFRQIADKCGAVLMCDMAHISGLIAAKELASP-F---D--YCDIVTSTTHKSL--RGPRG 371 (403)
Q Consensus 305 Viv~~s~~--g~~~Di---~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p-~---~--~aDivt~StHKtL--~GP~G 371 (403)
|++..+++ |...+. ++|.++|+++++++++|.++.- +...+..+.+ + + ...+++.|+.|+| .|-|-
T Consensus 171 v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~-~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRi 249 (389)
T PRK08068 171 MYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGA-IGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRV 249 (389)
T ss_pred EEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhh-hccCCCCCcChhhCCCccCCEEEEecchhccCCcccee
Confidence 87764444 566665 5777789999999999999642 1111111111 1 1 1337788999987 34445
Q ss_pred EEEEEeCC
Q 015609 372 GIIFFRRG 379 (403)
Q Consensus 372 G~I~~~~~ 379 (403)
|+++.++.
T Consensus 250 G~~~~~~~ 257 (389)
T PRK08068 250 AFAVGNES 257 (389)
T ss_pred EeEecCHH
Confidence 99987653
No 223
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.07 E-value=1e-08 Score=104.47 Aligned_cols=147 Identities=17% Similarity=0.127 Sum_probs=99.0
Q ss_pred eEEeC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhc
Q 015609 220 NVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAM 298 (403)
Q Consensus 220 ~V~~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~ 298 (403)
+|.++ ++++++..++.+++.+||.|++....+.++.. .....| .++++++++++++.+|++++++++.
T Consensus 98 ~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~---------~~~~~g--~~v~~v~~~~~~~~~d~~~l~~~~~ 166 (394)
T PRK06836 98 HIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRF---------YVDNHG--GKLVVVPTDTDTFQPDLDALEAAIT 166 (394)
T ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHH---------HHHHcC--CEEEEEecCCccCcCCHHHHHhhcC
Confidence 34444 56789999999999999999998876554321 122233 4667777776556899999999986
Q ss_pred cCCCcEEEEeCCCC--Ccccc---HHHHHHHHHH------cCCEEEEeccccccccccc-cccCCCC--cccEEEEcCcC
Q 015609 299 DYRPKILICGGSSY--PREWD---YGRFRQIADK------CGAVLMCDMAHISGLIAAK-ELASPFD--YCDIVTSTTHK 364 (403)
Q Consensus 299 ~~~pklViv~~s~~--g~~~D---i~~I~~Iake------~Ga~LivDaAh~~Glia~g-~~~~p~~--~aDivt~StHK 364 (403)
. ++++|++...++ |...+ +++|.++|++ +|+++++|.+..- +...+ ..+..+. .-.+++.|+.|
T Consensus 167 ~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~i~~~S~SK 244 (394)
T PRK06836 167 P-KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYRE-IVYDGAEVPYIFKYYDNSIVVYSFSK 244 (394)
T ss_pred c-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccc-cccCCCCCCChHHccCcEEEEecchh
Confidence 4 688887765444 55665 5666777888 8999999998643 22211 1111111 13577899999
Q ss_pred CCc--CCceEEEEEeCC
Q 015609 365 SLR--GPRGGIIFFRRG 379 (403)
Q Consensus 365 tL~--GP~GG~I~~~~~ 379 (403)
.|+ |-+-|+++.++.
T Consensus 245 ~~~~pGlRiG~~~~~~~ 261 (394)
T PRK06836 245 SLSLPGERIGYIAVNPE 261 (394)
T ss_pred hccCcceeeEEEecCHH
Confidence 874 445588888654
No 224
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.06 E-value=2.9e-09 Score=105.03 Aligned_cols=194 Identities=22% Similarity=0.282 Sum_probs=121.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH-HHHhhhc--cC
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF-AVYTGLL--LP 240 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~-aal~all--~p 240 (403)
++++.+...+.....++++--.++.-.-..+.+.=|. .-.+++-++|+... +|..+.+|+.|. -++.+.+ .+
T Consensus 44 p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~-lgdklApLiGA~~~----Evvv~dtts~nl~k~L~aalr~~~ 118 (407)
T COG3844 44 PRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPER-LGDKLAPLIGARAG----EVVVTDTTSINLFKVLAAALRPQE 118 (407)
T ss_pred chHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhH-HHHHhhhhhcCCCC----ceEEeCCcchHHHHHHHHHhccCC
Confidence 4455555555555555554433332212233443333 35679999999885 345555565554 4454544 46
Q ss_pred CCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccH
Q 015609 241 GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDY 318 (403)
Q Consensus 241 GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di 318 (403)
|++||++. ++.+-..++...+ .+.+.+. .|++ .+.+.++++++.+.+ ...+|++...+| |...|+
T Consensus 119 ~r~vIv~E---~~~fpTdly~a~g-~~~~~~~-----~~~~---~~~~~P~~~~~~~~d-d~AvV~L~~V~y~TGql~dm 185 (407)
T COG3844 119 GRRVIVSE---GDNFPTDLYIAEG-LADLLGI-----GYDL---EGVIAPRALEEAITD-DVAVVLLSHVNYKTGQLLDM 185 (407)
T ss_pred CceEEeec---CCCCCcchhhhcc-hhhhhcc-----cccc---eeeeChHHHHHhhcc-ceEEEEeccccccccceeeH
Confidence 89999876 3333333222111 1122222 1333 257889999998875 467777766554 788999
Q ss_pred HHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce--EEEEEeC
Q 015609 319 GRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG--GIIFFRR 378 (403)
Q Consensus 319 ~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G--G~I~~~~ 378 (403)
.+|.++||++|+++..|-||++|.++...... .+|+.+.++||+|.|-+| ++++..+
T Consensus 186 ~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~---gaDfaigcsyKYLNgGPGapa~l~v~~ 244 (407)
T COG3844 186 RAITALAHQHGALVGWDLAHSAGAVPVDLHAA---GADFAIGCSYKYLNGGPGAPAGLFVAP 244 (407)
T ss_pred HHHHHHHHhcCceEEeehhcccCCcceeeccc---CCCeeeeeeceeccCCCCCceeEEecc
Confidence 99999999999999999999999876432221 499999999999965444 5555443
No 225
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.06 E-value=5.4e-09 Score=106.29 Aligned_cols=195 Identities=21% Similarity=0.140 Sum_probs=126.2
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhh-hcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCh-H
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLT-NKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSC-T 227 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~-~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SG-T 227 (403)
.-|.|-.++|. .+|.|++++..... +.| |. . ... ..|+.+++++|++++ +|++++| +
T Consensus 53 ~~i~l~~n~~p~~~~~~v~~a~~~~~~~~~Y----p~------~-~~~----~lr~~ia~~~~~~~~----~I~~t~Ga~ 113 (380)
T PLN03026 53 DIVKLDANENPYGPPPEVLEALGNMKFPYVY----PD------P-ESR----RLRAALAEDSGLESE----NILVGCGAD 113 (380)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHhhHhhccC----CC------C-CHH----HHHHHHHHHhCcChh----hEEEcCCHH
Confidence 45777777665 47889888754211 112 11 1 111 246679999998875 4666654 6
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE
Q 015609 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv 307 (403)
+++..++.+++++||+|++....++... ......| .+++.++.+. ++.+|++++++++...++++|++
T Consensus 114 ~~i~~~~~~~~~~gd~Vlv~~P~y~~y~---------~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~~~~~~~~~v~l 181 (380)
T PLN03026 114 ELIDLLMRCVLDPGDKIIDCPPTFGMYV---------FDAAVNG--AEVIKVPRTP-DFSLDVPRIVEAVETHKPKLLFL 181 (380)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHH---------HHHHHcC--CEEEEeecCC-CCCcCHHHHHHHHhccCCcEEEE
Confidence 7888888889999999999887653211 1122334 3455555543 46799999999885457898887
Q ss_pred eCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-c-ccEEEEcCcCCC--cCCceEEEEEeCC
Q 015609 308 GGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-Y-CDIVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 308 ~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~-aDivt~StHKtL--~GP~GG~I~~~~~ 379 (403)
...+ +|..++.+++.+|++.. +++++|.++.- +...+.....++ + -.+++.|+.|.+ .|-|-|+++.+.+
T Consensus 182 ~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~-~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~ 257 (380)
T PLN03026 182 TSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIE-FSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLS 257 (380)
T ss_pred eCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchh-hcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHH
Confidence 6555 46789999999999865 99999999742 221110001111 1 347789999986 2334499987653
No 226
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.04 E-value=1.3e-08 Score=103.21 Aligned_cols=227 Identities=20% Similarity=0.194 Sum_probs=130.5
Q ss_pred CCCCCChHHHHHHHHHHHhhhcccceecc-Ccc-CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHH
Q 015609 131 SLPLADPEIFDIMEKEKQRQFKGIELIAS-ENF-VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALK 208 (403)
Q Consensus 131 ~l~~~d~ei~~li~~e~~rq~~~l~LiaS-en~-~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~ 208 (403)
.|....|.|+..+.+-.......-.|-.+ +++ .|+-|.+++....... .-+-+.|-|+-.+-++. .++++++
T Consensus 11 ~l~~~~~~vw~e~~~la~e~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~--~~~qYt~~~G~p~L~~a----L~k~~se 84 (420)
T KOG0257|consen 11 NLSTSKPYVWTEINRLAAEHKVPNPLGQGFPDFPPPKFVTEAAKNAAKEP--STNQYTRGYGLPQLRKA----LAKAYSE 84 (420)
T ss_pred cccccCCcHHHHHHHHHHhcCCCCcccCCCCCCCCcHHHHHHHHHHhccc--hhccccccCCchHHHHH----HHHHHHH
Confidence 34555555555554422222211113222 333 4666777776554321 01222233322222232 3445677
Q ss_pred HcCCC--CCCCcceEEeC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee-----
Q 015609 209 AFDLD--SDNWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK----- 280 (403)
Q Consensus 209 lfg~~--~~~~~v~V~~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~----- 280 (403)
++|.. +. -.|..| ++.+|+..++.+++.+||+|++...-+-+-. + .+.+.|....+++..
T Consensus 85 ~~~~~~~~~---~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~------~---~~~maG~tpv~v~~~~~~g~ 152 (420)
T KOG0257|consen 85 FYGGLLDPD---DEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYI------P---QVVMAGGTPVFVPLKPKEGN 152 (420)
T ss_pred HhccccCCc---ccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhh------h---HHhhcCCcceeecccccccc
Confidence 66643 11 135544 5688999999999999999999887543221 1 234445332233322
Q ss_pred cCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCC--ccc---cHHHHHHHHHHcCCEEEEecccccccccccc-cc----C
Q 015609 281 VNPQTGYIDYEKLEEKAMDYRPKILICGGSSYP--REW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKE-LA----S 350 (403)
Q Consensus 281 vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g--~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~-~~----~ 350 (403)
+-..+..+|.+++|.++.+ +||+|+++.+++| .+. -+++|++||+++|.+++.|.+--. ++..+. +. .
T Consensus 153 ~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~-~v~d~~~h~r~asl 230 (420)
T KOG0257|consen 153 VSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEW-LVYDGNKHIRIASL 230 (420)
T ss_pred ccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHH-HhhCCCcceeeecC
Confidence 1123567999999999985 7999988766553 343 589999999999999999997333 333221 11 1
Q ss_pred CCCc-ccEEEEcCcCCCcCCce---EEEEEeC
Q 015609 351 PFDY-CDIVTSTTHKSLRGPRG---GIIFFRR 378 (403)
Q Consensus 351 p~~~-aDivt~StHKtL~GP~G---G~I~~~~ 378 (403)
|=-+ .-+-++|+.|++ |-.| |+++..+
T Consensus 231 Pgm~ertitvgS~gKtf-~~TGWrlGW~igp~ 261 (420)
T KOG0257|consen 231 PGMYERTITVGSFGKTF-GVTGWRLGWAIGPK 261 (420)
T ss_pred CchhheEEEecccccee-eeeeeeeeeeechH
Confidence 1012 446678999997 4444 9999844
No 227
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.04 E-value=2.4e-08 Score=101.23 Aligned_cols=208 Identities=17% Similarity=0.184 Sum_probs=122.9
Q ss_pred hhcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCC
Q 015609 150 QFKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPYS 225 (403)
Q Consensus 150 q~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~S 225 (403)
..+-+.|-.+++. .++.+.+++...+......+|+. ..|.. .+-+...+.+.+..| ++++. +|+.++
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~aia~~~~~~~g~~~~~~~---~I~it~ 99 (388)
T PRK07366 29 GKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLL---FHGTL---DFREAAAQWYEQRFGLAVDPET---EVLPLI 99 (388)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCC---CCCCH---HHHHHHHHHHHHhhCCcCCCcC---eEEECC
Confidence 3445777666654 37788888876553221111211 12332 121111222333334 44421 366665
Q ss_pred -hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHHHHHHHhccCCCc
Q 015609 226 -CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYEKLEEKAMDYRPK 303 (403)
Q Consensus 226 -GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d~Le~~i~~~~pk 303 (403)
+++|+..++.+++++||+|++..+.+.+... .+...| .+++++++++++ ..+|++++++.+.. ++|
T Consensus 100 Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---------~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k 167 (388)
T PRK07366 100 GSQEGTAHLPLAVLNPGDFALLLDPGYPSHAG---------GVYLAG--GQIYPMPLRAENDFLPVFADIPTEVLA-QAR 167 (388)
T ss_pred CcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHhcC--CEEEEEECCCccCCCCCHHHHHHhhcc-cce
Confidence 4679999999999999999999887655431 223334 455666666443 45888999877753 588
Q ss_pred EEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEecccccccccccc--ccC--CCC-ccc--EEEEcCcCCC--cCC
Q 015609 304 ILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKE--LAS--PFD-YCD--IVTSTTHKSL--RGP 369 (403)
Q Consensus 304 lViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~--~~~--p~~-~aD--ivt~StHKtL--~GP 369 (403)
+|++...++ |...+ +++|.++|+++|+++++|.+..- +...+. .+. .++ .-+ +++.|+.|++ .|-
T Consensus 168 ~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~-~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~Gl 246 (388)
T PRK07366 168 LMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVD-LVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGF 246 (388)
T ss_pred EEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhh-cccCCCCCCCChhhCCCCcccEEEEeecccccCCcch
Confidence 887765555 44554 56677789999999999998543 221111 111 111 112 5678999987 455
Q ss_pred ceEEEEEeCC
Q 015609 370 RGGIIFFRRG 379 (403)
Q Consensus 370 ~GG~I~~~~~ 379 (403)
|-|+++.+++
T Consensus 247 RiG~~v~~~~ 256 (388)
T PRK07366 247 RIGFAIGNAQ 256 (388)
T ss_pred hheehcCCHH
Confidence 6699987654
No 228
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.04 E-value=5.9e-09 Score=105.84 Aligned_cols=192 Identities=20% Similarity=0.093 Sum_probs=112.9
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccc---hHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTG---NQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL- 238 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G---~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all- 238 (403)
.+|.|++++...+... .++..+ .+... .+.++++++++.+.+ ..++++||++||.+++..+.
T Consensus 53 ~~p~v~~a~~~~~~~~-------~~~~~~~~~~~~~~----~l~~~l~~~~~~~~~---~v~~~~sgsea~~~al~~~~~ 118 (413)
T cd00610 53 NHPEVVEALKEQLAKL-------THFSLGFFYNEPAV----ELAELLLALTPEGLD---KVFFVNSGTEAVEAALKLARA 118 (413)
T ss_pred CCHHHHHHHHHHHHhC-------cCccCcccCCHHHH----HHHHHHHHhCCCCCC---EEEEcCcHHHHHHHHHHHHHH
Confidence 4788888887766321 111111 22223 345568899985443 23556789999999998773
Q ss_pred -cCCCeEEecCCCCCccccccccCCccchhhhccc----------ceEEeeeecCC-----CCCCCCHHHHHHHhccC--
Q 015609 239 -LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI----------FFESFPYKVNP-----QTGYIDYEKLEEKAMDY-- 300 (403)
Q Consensus 239 -~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~----------~~~vv~~~vd~-----~~g~ID~d~Le~~i~~~-- 300 (403)
.++|+|++.+..+.|.... .+...+. ...++.++.+. +....|+++|+++++++
T Consensus 119 ~~~~~~ii~~~~~yhg~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 190 (413)
T cd00610 119 YTGRKKIISFEGAYHGRTLG--------ALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPE 190 (413)
T ss_pred HcCCCeEEEECCCcCCccHH--------HHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCC
Confidence 6789999988665443210 0111110 01223333321 01234899999998763
Q ss_pred CCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEecccccccccccc--ccCCCC-cccEEEEcCcCCCcCC-c
Q 015609 301 RPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKE--LASPFD-YCDIVTSTTHKSLRGP-R 370 (403)
Q Consensus 301 ~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~--~~~p~~-~aDivt~StHKtL~GP-~ 370 (403)
++++|++.+. ..|...+ +++|.++|+++|+++++|.+|. |+...+. ....++ ..|++++| |+|.+. +
T Consensus 191 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~~~~d~~t~s--K~l~~g~~ 267 (413)
T cd00610 191 EVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFGVEPDIVTLG--KGLGGGLP 267 (413)
T ss_pred CEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcCCCCCeEEEc--ccccCccc
Confidence 4566777643 2355566 9999999999999999999987 3311111 111111 25777554 998653 2
Q ss_pred eEEEEEeCC
Q 015609 371 GGIIFFRRG 379 (403)
Q Consensus 371 GG~I~~~~~ 379 (403)
.|+++.+++
T Consensus 268 ~g~~~~~~~ 276 (413)
T cd00610 268 LGAVLGREE 276 (413)
T ss_pred cEEEEEcHH
Confidence 366776653
No 229
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.04 E-value=4.3e-09 Score=105.42 Aligned_cols=196 Identities=16% Similarity=0.117 Sum_probs=125.5
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC-hHH
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYS-CTS 228 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~S-GT~ 228 (403)
..+.|-.+++. .++.|++++...+.. .. .+|.. | .+ ..|+.++++++++++ +|++++ +++
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~~-~~p~~----g------~~-~lr~~ia~~~~~~~~----~i~~t~G~~~ 92 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE-LA-LYPDG----Y------AP-ELRTKVAKHLGVDEE----QLLFGAGLDE 92 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH-hh-cCCCC----c------HH-HHHHHHHHHhCCCHH----HEEECCCHHH
Confidence 34556555443 478888888765432 11 11111 1 11 245678889998764 466665 567
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe
Q 015609 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~ 308 (403)
++..++.+++++||+|++....+.+.. ......|. ++..++++ ++.+|++++++++.+ ++++|++.
T Consensus 93 ~l~~~~~~~~~~gd~v~~~~p~y~~~~---------~~~~~~g~--~~~~~~~~--~~~~d~~~l~~~~~~-~~~~v~i~ 158 (359)
T PRK03158 93 VIQMISRALLNPGTNTVMAEPTFSQYR---------HNAIIEGA--EVREVPLK--DGGHDLEAMLKAIDE-QTKIVWIC 158 (359)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCHHHHH---------HHHHHcCC--eEEEEecC--CCCcCHHHHHHhcCC-CCCEEEEe
Confidence 888888889999999999887664421 11223343 45555554 357899999988764 67887765
Q ss_pred CCC--CCccccHHHHHHHHHH--cCCEEEEeccccccccccccccCCC---C--cccEEEEcCcCCCc--CCceEEEEEe
Q 015609 309 GSS--YPREWDYGRFRQIADK--CGAVLMCDMAHISGLIAAKELASPF---D--YCDIVTSTTHKSLR--GPRGGIIFFR 377 (403)
Q Consensus 309 ~s~--~g~~~Di~~I~~Iake--~Ga~LivDaAh~~Glia~g~~~~p~---~--~aDivt~StHKtL~--GP~GG~I~~~ 377 (403)
..+ +|...+.++|.++++. +|+++++|.++...... +..+..+ + .-.+++.|+.|+++ |-|-|+++.+
T Consensus 159 ~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~ 237 (359)
T PRK03158 159 NPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTA-EDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS 237 (359)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCC-cccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC
Confidence 444 4678899999999887 49999999997653221 1111111 1 13477789999873 4455999876
Q ss_pred CC
Q 015609 378 RG 379 (403)
Q Consensus 378 ~~ 379 (403)
++
T Consensus 238 ~~ 239 (359)
T PRK03158 238 EE 239 (359)
T ss_pred HH
Confidence 54
No 230
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.04 E-value=1.3e-08 Score=104.00 Aligned_cols=220 Identities=12% Similarity=0.012 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHhhhcccceeccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCC
Q 015609 138 EIFDIMEKEKQRQFKGIELIASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSD 215 (403)
Q Consensus 138 ei~~li~~e~~rq~~~l~LiaSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~ 215 (403)
.+..++.+.......-+.|-.+.... ++.+.+++...+.... .+|+. ..|.. ++.+...+.+++.+|.+..
T Consensus 20 ~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~ia~~l~~~~g~~~~ 92 (402)
T PRK06107 20 AAAARARELRAAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERGE-TKYTL---VNGTP---ALRKAIIAKLERRNGLHYA 92 (402)
T ss_pred HHHHHHHHHHhccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC---CCCCH---HHHHHHHHHHHHhcCCCCC
Confidence 33344433322233446666554443 5888888887664311 11111 12332 2222233456667776421
Q ss_pred CCcceEEeCCh-HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHH
Q 015609 216 NWGVNVQPYSC-TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKL 293 (403)
Q Consensus 216 ~~~v~V~~~SG-T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~L 293 (403)
. -+|.+++| ++|+..++.+++++||+|++.+..+.++.. .+...+ ...+.++++.+ +..+|++++
T Consensus 93 ~--~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~---------~~~~~~--~~~~~v~~~~~~~~~~~~~~l 159 (402)
T PRK06107 93 D--NEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPD---------MVLAND--GTPVIVACPEEQGFKLTPEAL 159 (402)
T ss_pred h--hhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHH---------HHHHcC--CEEEEecCCcccCCCCCHHHH
Confidence 1 24666665 689999999999999999999876544321 122222 23444454422 346899999
Q ss_pred HHHhccCCCcEEEEeCCC--CCcccc---HHHHHHHHHHc-CCEEEEeccccccccccc-cccCCC---Cc---ccEEEE
Q 015609 294 EEKAMDYRPKILICGGSS--YPREWD---YGRFRQIADKC-GAVLMCDMAHISGLIAAK-ELASPF---DY---CDIVTS 360 (403)
Q Consensus 294 e~~i~~~~pklViv~~s~--~g~~~D---i~~I~~Iake~-Ga~LivDaAh~~Glia~g-~~~~p~---~~---aDivt~ 360 (403)
++++.. ++++|++...+ +|...+ +++|+++|+++ |+++++|.+..- +...+ ..+... .. --+++.
T Consensus 160 ~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~-l~~~~~~~~~~~~~~~~~~~~vi~~~ 237 (402)
T PRK06107 160 EAAITP-RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDH-IRFDDEPTPHLLAAAPELRDRVLVTN 237 (402)
T ss_pred HhhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccc-cccCCCCCCCHHHhCcCccCCEEEEe
Confidence 998864 57766655333 455554 57778888998 999999998652 11111 111100 11 126677
Q ss_pred cCcCCCc--CCceEEEEEeCC
Q 015609 361 TTHKSLR--GPRGGIIFFRRG 379 (403)
Q Consensus 361 StHKtL~--GP~GG~I~~~~~ 379 (403)
|++|+|+ |-|-|+++.+++
T Consensus 238 S~SK~~~~pGlRiG~~~~~~~ 258 (402)
T PRK06107 238 GVSKTYAMTGWRIGYAAGPAD 258 (402)
T ss_pred ccchhhcCcccceeeeecCHH
Confidence 8999973 334499887654
No 231
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.03 E-value=6.5e-09 Score=105.61 Aligned_cols=192 Identities=18% Similarity=0.101 Sum_probs=111.7
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc---
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL--- 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~--- 239 (403)
.+|.|++++...+.. +. ..+ +.+ ..+... ++++.++++++.+. .++++|||+||.+++..+..
T Consensus 48 ~~p~v~~a~~~~~~~-~~--~~~-~~~-~~~~~~----~~~~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~ 113 (400)
T PTZ00125 48 CHPKILAALINQAQK-LT--LTS-RAF-YNDVLG----LAEKYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY 113 (400)
T ss_pred CCHHHHHHHHHHHHh-cc--ccc-ccc-cCHHHH----HHHHHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 478888888776532 32 111 211 122223 34556888888653 46678999999999986631
Q ss_pred -------CCCeEEecCCCCCccccccccCCccchhhhcccc-eEEeeeecCC---CCCCCCHHHHHHHhccCCCcEEEEe
Q 015609 240 -------PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-FESFPYKVNP---QTGYIDYEKLEEKAMDYRPKILICG 308 (403)
Q Consensus 240 -------pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-~~vv~~~vd~---~~g~ID~d~Le~~i~~~~pklViv~ 308 (403)
.+++|++.+..+.|.. . ..+...+.. +.....+..+ .-...|+++|++.++..++++|++.
T Consensus 114 ~~~~~~~~~~~vl~~~~~~Hg~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~e 185 (400)
T PTZ00125 114 EVKGIPENQAKIIFCNGNFSGRT-----I---GACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVE 185 (400)
T ss_pred hccCCCCCCCeEEEECCCcCCcc-----H---HHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEc
Confidence 3577888775543321 1 011111110 0000000000 0012489999999864467888876
Q ss_pred CC--CCCcccc----HHHHHHHHHHcCCEEEEecccccccccccc-ccCCCC--cccEEEEcCcCCCcCC--ceEEEEEe
Q 015609 309 GS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKE-LASPFD--YCDIVTSTTHKSLRGP--RGGIIFFR 377 (403)
Q Consensus 309 ~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~-~~~p~~--~aDivt~StHKtL~GP--~GG~I~~~ 377 (403)
+. ..|...+ +++|.++|+++|+++++|.+|. |+...|. ...... ..|+++++ |+|.|+ +-|+++.+
T Consensus 186 p~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~-g~g~~G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~ 262 (400)
T PTZ00125 186 PIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT-GLGRTGKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLAN 262 (400)
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEc
Confidence 43 3466666 9999999999999999999985 3321221 111111 25888765 999653 34777776
Q ss_pred CC
Q 015609 378 RG 379 (403)
Q Consensus 378 ~~ 379 (403)
++
T Consensus 263 ~~ 264 (400)
T PTZ00125 263 DD 264 (400)
T ss_pred HH
Confidence 64
No 232
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.03 E-value=2.1e-08 Score=101.72 Aligned_cols=147 Identities=12% Similarity=0.114 Sum_probs=97.9
Q ss_pred eEEeC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHHHHHh
Q 015609 220 NVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKLEEKA 297 (403)
Q Consensus 220 ~V~~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~Le~~i 297 (403)
+|..+ ++++|+..++.+++++||+|++....+.+... .+...|. ++++++.++ ++..+|+++|++++
T Consensus 91 ~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~---------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~ 159 (384)
T PRK06348 91 EIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKD---------QIEMVGG--KPIILETYEEDGFQINVKKLEALI 159 (384)
T ss_pred hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH---------HHHHcCC--EEEEecCCcCcCCcCCHHHHHHhh
Confidence 35544 56779999999999999999999887655431 2233343 445555432 24569999999988
Q ss_pred ccCCCcEEEEeCCCC--Cccc---cHHHHHHHHHHcCCEEEEeccccccccccccccC--CCC---cccEEEEcCcCCCc
Q 015609 298 MDYRPKILICGGSSY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFD---YCDIVTSTTHKSLR 367 (403)
Q Consensus 298 ~~~~pklViv~~s~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~---~aDivt~StHKtL~ 367 (403)
.. ++++|++...++ |... ++++|.++|+++|+++++|.++.- +...+.... .+. .-.+++.|+.|+++
T Consensus 160 ~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~ 237 (384)
T PRK06348 160 TS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDG-FSFYEDFVPMATLAGMPERTITFGSFSKDFA 237 (384)
T ss_pred Cc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEeccccc-ceeCCCccchhhcCCCcCcEEEEecchhccC
Confidence 64 678887664444 4455 477888889999999999998653 222111110 111 12377789999874
Q ss_pred --CCceEEEEEeCC
Q 015609 368 --GPRGGIIFFRRG 379 (403)
Q Consensus 368 --GP~GG~I~~~~~ 379 (403)
|-|.|++++.+.
T Consensus 238 l~GlRiG~~v~~~~ 251 (384)
T PRK06348 238 MTGWRIGYVIAPDY 251 (384)
T ss_pred CccccceeeecCHH
Confidence 556799998654
No 233
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.02 E-value=5.9e-09 Score=103.90 Aligned_cols=162 Identities=20% Similarity=0.237 Sum_probs=102.6
Q ss_pred HHHHHHHcC------CCCCCCcceEEeCChHHHHHHHH-hhh-ccCCCeEEecCCCCCccccccccCCccchhhhcccce
Q 015609 203 FERALKAFD------LDSDNWGVNVQPYSCTSANFAVY-TGL-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFF 274 (403)
Q Consensus 203 rerla~lfg------~~~~~~~v~V~~~SGT~An~aal-~al-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~ 274 (403)
|+.++++++ .+.+ .+|++++|+.++..++ ..+ .++||+|++..+.|.+.. ..+...|.
T Consensus 50 r~~ia~~~~~~~~~~~~~~---~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~---------~~~~~~g~-- 115 (363)
T PF00155_consen 50 REAIADFLGRRYGVPVDPE---ANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYI---------EAARLLGA-- 115 (363)
T ss_dssp HHHHHHHHHHHHTHHTTGG---EGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHH---------HHHHHTTS--
T ss_pred HHHHHHHhhhccCcccccc---eEEEEecccccchhhhhhcccccccccceecCCcccccc---------ccccccCc--
Confidence 455777777 4442 2577888877655554 444 569999999987765432 12334443
Q ss_pred EEeeeecC-CCCCCCCHHHHHHHhccC-----CCcEEEEeCCC--CCccccHH---HHHHHHHHcCCEEEEecccccccc
Q 015609 275 ESFPYKVN-PQTGYIDYEKLEEKAMDY-----RPKILICGGSS--YPREWDYG---RFRQIADKCGAVLMCDMAHISGLI 343 (403)
Q Consensus 275 ~vv~~~vd-~~~g~ID~d~Le~~i~~~-----~pklViv~~s~--~g~~~Di~---~I~~Iake~Ga~LivDaAh~~Gli 343 (403)
++++++++ ...+.+|+++|++.+++. ++++|++...+ +|...+.+ +|.++|+++|+++++|.+|.....
T Consensus 116 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~ 195 (363)
T PF00155_consen 116 EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIF 195 (363)
T ss_dssp EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBS
T ss_pred eeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceecccc
Confidence 45555533 135689999999999874 45677766444 45566555 555559999999999999887654
Q ss_pred ccccc---cCCCC-ccc-EEEEcCcCCCc--CCceEEEEEeC
Q 015609 344 AAKEL---ASPFD-YCD-IVTSTTHKSLR--GPRGGIIFFRR 378 (403)
Q Consensus 344 a~g~~---~~p~~-~aD-ivt~StHKtL~--GP~GG~I~~~~ 378 (403)
..... ...++ +.+ +++.|+.|+++ |-+-|++++++
T Consensus 196 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~ 237 (363)
T PF00155_consen 196 GDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP 237 (363)
T ss_dssp SSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH
T ss_pred CCCccCcccccccccccceeeeeccccccccccccccccchh
Confidence 32210 01111 234 78899999863 33349999865
No 234
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.02 E-value=1.3e-08 Score=102.98 Aligned_cols=194 Identities=13% Similarity=0.047 Sum_probs=123.6
Q ss_pred cceeccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH-HHH
Q 015609 154 IELIASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT-SAN 230 (403)
Q Consensus 154 l~LiaSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT-~An 230 (403)
+.|-.+++.. ++.+++++...+...+ +|+.. + ... .|+.++++++++++ +|++++|+ +++
T Consensus 35 ~~l~~~~~~~~~~~~~~~a~~~~~~~~~--~Y~~~----~---~~~----Lr~~ia~~~~~~~~----~I~it~G~~~~l 97 (369)
T PRK08153 35 ARIGANESGFGPSPSVIAAMREAAAEIW--KYGDP----E---NHD----LRHALAAHHGVAPE----NIMVGEGIDGLL 97 (369)
T ss_pred eEecCCCCCCCCCHHHHHHHHHHHHHhh--cCCCC----c---cHH----HHHHHHHHhCCCHH----HEEEcCCHHHHH
Confidence 5666666554 8889999876543211 22211 1 122 35678889998774 57777665 567
Q ss_pred HHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC
Q 015609 231 FAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310 (403)
Q Consensus 231 ~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s 310 (403)
..++.+++++||.|++....|.+... .+...|. +++.++++. ..+|++++++.+...++|+|++..+
T Consensus 98 ~~~~~~~~~~gd~vlv~~p~y~~~~~---------~~~~~g~--~~~~vp~~~--~~~~~~~l~~~~~~~~~~~i~l~~P 164 (369)
T PRK08153 98 GLIVRLYVEPGDPVVTSLGAYPTFNY---------HVAGFGG--RLVTVPYRD--DREDLDALLDAARRENAPLVYLANP 164 (369)
T ss_pred HHHHHHhcCCCCEEEECCCcchHHHH---------HHHHcCC--eEEEeeCCC--CCCCHHHHHHHhcccCCcEEEEeCC
Confidence 77778889999999998876543321 1223333 445555543 3589999988776567888877544
Q ss_pred C--CCccccHHHHHHHHHHc--CCEEEEeccccccccccccccCCCC--c-ccEEEEcCcCCCc--CCceEEEEEeCC
Q 015609 311 S--YPREWDYGRFRQIADKC--GAVLMCDMAHISGLIAAKELASPFD--Y-CDIVTSTTHKSLR--GPRGGIIFFRRG 379 (403)
Q Consensus 311 ~--~g~~~Di~~I~~Iake~--Ga~LivDaAh~~Glia~g~~~~p~~--~-aDivt~StHKtL~--GP~GG~I~~~~~ 379 (403)
+ +|...+.+++.++++.+ +++|++|.++.- +...+.. .++. . --+++.|+.|+++ |-|-|+++++.+
T Consensus 165 ~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~-~~~~~~~-~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~ 240 (369)
T PRK08153 165 DNPMGSWHPAADIVAFIEALPETTLLVLDEAYCE-TAPAGAA-PPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPG 240 (369)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhh-hcCcccc-hhhhhcCCCEEEEecchHhccCcchheeeeecCHH
Confidence 4 46788888887777654 899999999652 2222211 1121 1 2267889999973 555699998653
No 235
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.01 E-value=5e-09 Score=106.17 Aligned_cols=196 Identities=15% Similarity=0.138 Sum_probs=124.6
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC-hHH
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYS-CTS 228 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~S-GT~ 228 (403)
..|.|-.++|. +++.+++++...+.... .||. .|. + ..|+.++++++++++ +|.+++ +++
T Consensus 30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~~~--~Yp~----~g~------~-~Lr~aia~~~~~~~~----~I~vt~Gs~e 92 (366)
T PRK01533 30 SFVKLASNENPFGCSPRVLDELQKSWLDHA--LYPD----GGA------T-TLRQTIANKLHVKME----QVLCGSGLDE 92 (366)
T ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHHHhcC--cCCC----CCH------H-HHHHHHHHHhCCCcc----eEEECCCHHH
Confidence 45777777777 48889999876654321 1221 121 1 146678889999875 466665 567
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe
Q 015609 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~ 308 (403)
++..++.+++++||+|++..+.+.+.. ......| .+++.++.+ .+.+|++++++++++ ++++|++.
T Consensus 93 ~i~~~~~~l~~~gd~vlv~~P~y~~~~---------~~~~~~g--~~v~~v~~~--~~~~d~~~l~~~~~~-~~~~v~i~ 158 (366)
T PRK01533 93 VIQIISRAVLKAGDNIVTAGATFPQYR---------HHAIIEG--CEVKEVALN--NGVYDLDEISSVVDN-DTKIVWIC 158 (366)
T ss_pred HHHHHHHHhcCCCCEEEEcCCcHHHHH---------HHHHHcC--CEEEEeecC--CCCcCHHHHHHHhCc-CCcEEEEe
Confidence 899999999999999999887654332 1123334 345555554 356999999998864 67888776
Q ss_pred CCCC--CccccHHHHHHHHHHc--CCEEEEeccccccccccccccCCC---C-c-ccEEEEcCcCCCc--CCceEEEEEe
Q 015609 309 GSSY--PREWDYGRFRQIADKC--GAVLMCDMAHISGLIAAKELASPF---D-Y-CDIVTSTTHKSLR--GPRGGIIFFR 377 (403)
Q Consensus 309 ~s~~--g~~~Di~~I~~Iake~--Ga~LivDaAh~~Glia~g~~~~p~---~-~-aDivt~StHKtL~--GP~GG~I~~~ 377 (403)
..++ |..++.+++.+|++.+ +.++++|.++. .+...+..+..+ + + --+++.|+.|+++ |-+-|+++..
T Consensus 159 ~P~NPTG~~~~~~~l~~l~~~~~~~~~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~ 237 (366)
T PRK01533 159 NPNNPTGTYVNDRKLTQFIEGISENTLIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH 237 (366)
T ss_pred CCCCCCCCCcCHHHHHHHHHhCCCCCEEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC
Confidence 5554 6777877776666532 34678899875 333211111111 1 1 2377889999863 4455888876
Q ss_pred CC
Q 015609 378 RG 379 (403)
Q Consensus 378 ~~ 379 (403)
++
T Consensus 238 ~~ 239 (366)
T PRK01533 238 EE 239 (366)
T ss_pred HH
Confidence 43
No 236
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.01 E-value=8e-09 Score=104.36 Aligned_cols=196 Identities=19% Similarity=0.137 Sum_probs=123.9
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCh-HH
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSC-TS 228 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SG-T~ 228 (403)
+.+.|-.++|. .++.+++++.......+ .|+.. .| .. .|+.+++++|++.+ +|++++| ++
T Consensus 37 ~~i~l~~~~~~~~~~~~~~~al~~~~~~~~--~Y~~~---~g----~~----lr~~ia~~~~~~~~----~i~~t~G~~~ 99 (371)
T PRK05166 37 RIAKLGSNENPLGPSPAVRRAFADIAELLR--LYPDP---QG----RA----LREAIAARTGVPAD----RIILGNGSED 99 (371)
T ss_pred ceEEcCCCCCCCCCCHHHHHHHHHHHHHhh--cCCCC---cH----HH----HHHHHHHHhCcCHH----HEEEcCCHHH
Confidence 34666655554 57788888765332211 12211 11 11 35668889998764 5666665 66
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe
Q 015609 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~ 308 (403)
++..++.+++++||+|++....+..+. ..+...| .++++++.++ ++.+|++++++++.+ ++|+|++.
T Consensus 100 ~l~~~~~~~~~~gd~vli~~P~y~~~~---------~~~~~~g--~~~~~v~~~~-~~~~~~~~l~~~~~~-~~~~v~l~ 166 (371)
T PRK05166 100 LIAVICRAVLRPGDRVVTLYPSFPLHE---------DYPTMMG--ARVERVTVTP-DLGFDLDALCAAVAR-APRMLMFS 166 (371)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHH---------HHHHHcC--CeEEEeecCC-CCCCCHHHHHHhhhc-CCCEEEEe
Confidence 888888889999999999877654332 1123334 4556666653 467999999998865 67888775
Q ss_pred CCC--CCccccHHHHHHHHHH--cCCEEEEeccccccccccccccCCC---C--c-ccEEEEcCcCCC--cCCceEEEEE
Q 015609 309 GSS--YPREWDYGRFRQIADK--CGAVLMCDMAHISGLIAAKELASPF---D--Y-CDIVTSTTHKSL--RGPRGGIIFF 376 (403)
Q Consensus 309 ~s~--~g~~~Di~~I~~Iake--~Ga~LivDaAh~~Glia~g~~~~p~---~--~-aDivt~StHKtL--~GP~GG~I~~ 376 (403)
..+ +|..++.+++.+|++. .++++++|.++.- +...+..+..+ . . --+++.|+.|.+ .|.|-|+++.
T Consensus 167 ~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~ 245 (371)
T PRK05166 167 NPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAE-YAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLV 245 (371)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHH-hcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeec
Confidence 444 4678888888777764 3789999999653 22211111111 1 1 126788999986 4566699776
Q ss_pred eC
Q 015609 377 RR 378 (403)
Q Consensus 377 ~~ 378 (403)
.+
T Consensus 246 ~~ 247 (371)
T PRK05166 246 SD 247 (371)
T ss_pred CC
Confidence 44
No 237
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.00 E-value=2.2e-08 Score=101.99 Aligned_cols=205 Identities=16% Similarity=0.179 Sum_probs=122.4
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC---CCCCCcceEEeC-
Q 015609 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL---DSDNWGVNVQPY- 224 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~---~~~~~~v~V~~~- 224 (403)
+..|.|-.+++. .++.+++++...+.... .|+. ..|... +-+...+.+.+.+|. ++++ +|+.+
T Consensus 29 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~--~Y~~---~~G~~~---lr~~ia~~~~~~~g~~~~~~~~---~i~it~ 97 (396)
T PRK09147 29 LPPISLSIGEPKHPTPAFIKDALAANLDGLA--SYPT---TAGLPA---LREAIAAWLERRYGLPALDPAT---QVLPVN 97 (396)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHhhhhc--CCCC---CCCCHH---HHHHHHHHHHHHhCCCcCCccc---eEEECC
Confidence 455666655543 37778888776543211 1211 123221 111122234444463 3321 45555
Q ss_pred ChHHHHHHHHhhhccC---CCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHHHHHHHhccC
Q 015609 225 SCTSANFAVYTGLLLP---GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYEKLEEKAMDY 300 (403)
Q Consensus 225 SGT~An~aal~all~p---GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d~Le~~i~~~ 300 (403)
++++|+..++.++++| ||+|++..+.+.+.. ..+...| .+++++++++++ ..+|++++++.+.+
T Consensus 98 G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~---------~~~~~~g--~~~~~vp~~~~~~~~~d~~~l~~~~~~- 165 (396)
T PRK09147 98 GSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYE---------GAALLAG--AEPYFLNCDPANNFAPDFDAVPAEVWA- 165 (396)
T ss_pred ChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchH---------HHHHhcC--CEEEEeccCccccCccCHHHHHHHHhh-
Confidence 5578999999999999 999999887664432 1123334 355666665443 36999999887754
Q ss_pred CCcEEEEeCCCC--Cccc---cHHHHHHHHHHcCCEEEEecccccccccccccc--CC------CC--ccc--EEEEcCc
Q 015609 301 RPKILICGGSSY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SP------FD--YCD--IVTSTTH 363 (403)
Q Consensus 301 ~pklViv~~s~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p------~~--~aD--ivt~StH 363 (403)
++|+|++...++ |... .+++|.++|+++++++++|.++.--.. .+..+ .. .+ ..+ +++.|+.
T Consensus 166 ~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 244 (396)
T PRK09147 166 RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYF-DEAAPPLGLLEAAAELGRDDFKRLVVFHSLS 244 (396)
T ss_pred ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeecccccccc-CCCCCCchhhhhccccCccccccEEEEeccc
Confidence 688887765554 4555 577778889999999999999764221 11100 00 00 012 7788999
Q ss_pred CC--CcCCceEEEEEeCC
Q 015609 364 KS--LRGPRGGIIFFRRG 379 (403)
Q Consensus 364 Kt--L~GP~GG~I~~~~~ 379 (403)
|. +.|-|-|++++++.
T Consensus 245 K~~~~~GlRiG~~~~~~~ 262 (396)
T PRK09147 245 KRSNVPGLRSGFVAGDAA 262 (396)
T ss_pred cccCCccceeeeecCCHH
Confidence 96 45556699987653
No 238
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.00 E-value=3.4e-10 Score=113.96 Aligned_cols=189 Identities=19% Similarity=0.277 Sum_probs=38.3
Q ss_pred cCccCcHHHHHHHHHHhhhcCC-------CCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015609 159 SENFVCRAVMEALGSHLTNKYS-------EGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 159 Sen~~~p~V~eA~~s~l~~~y~-------eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
+-.++++++.+++.....+ |. .|..|+|| +.+++ .++.++|++.+ ++.++...|+.
T Consensus 14 GRs~l~~~a~~a~~~~a~~-Y~nLE~dl~~G~Rg~R~-------~~v~~----ll~~ltgAeaA-----~VvNnnaAAv~ 76 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVASG-YSNLEYDLETGKRGSRY-------AHVEE----LLCELTGAEAA-----LVVNNNAAAVL 76 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccc-ccccccccccccccccc-------ccccc----ccccccccccc-----ccccccccccc
Confidence 3456678888877654332 22 23444444 23443 47889999974 45567778888
Q ss_pred HHHhhhccCCCeEEecCC---CCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEE-EE
Q 015609 232 AVYTGLLLPGDRIMGLDS---PSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKIL-IC 307 (403)
Q Consensus 232 aal~all~pGD~VL~~~~---ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklV-iv 307 (403)
.++.++. +|.+|+++.- +.||.|--. ..+...|. ..+.+.. +..-.+++.+++|.+ ++.+| .+
T Consensus 77 L~l~~la-~~~EvIvsRGelVeiGgsFRip------~vm~~sGa--~lvEVGt---tN~t~~~Dye~AI~e-~Ta~ll~V 143 (367)
T PF03841_consen 77 LALNTLA-KGKEVIVSRGELVEIGGSFRIP------DVMRQSGA--RLVEVGT---TNRTHLSDYEKAITE-NTAALLKV 143 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccc-cccccccccccccccccccccc------cccccccc--ccccccc---ccccccccccccccc-cccccccc
Confidence 8887775 4667777654 234443211 11223332 3343332 223446677788875 45554 56
Q ss_pred eCCCC---C--ccccHHHHHHHHHHcCCEEEEeccccccccc---------cccccCCCC-cccEEEEcCcCCCcCCceE
Q 015609 308 GGSSY---P--REWDYGRFRQIADKCGAVLMCDMAHISGLIA---------AKELASPFD-YCDIVTSTTHKSLRGPRGG 372 (403)
Q Consensus 308 ~~s~~---g--~~~Di~~I~~Iake~Ga~LivDaAh~~Glia---------~g~~~~p~~-~aDivt~StHKtL~GP~GG 372 (403)
..|+| | ...+++++.++|+++++++++|.+ +|... .+....-+. ++|+|+||+.|.|+||+.|
T Consensus 144 h~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~Dlg--sG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaG 221 (367)
T PF03841_consen 144 HTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLG--SGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAG 221 (367)
T ss_dssp -----------------HHHHHHHHHT--EEEE-T--THHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-E
T ss_pred cccccccccccccccHHHHHHHHhhcCCcEEEECC--CCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeE
Confidence 66776 2 356899999999999999999996 43321 111111122 4999999999999999999
Q ss_pred EEEEeCC
Q 015609 373 IIFFRRG 379 (403)
Q Consensus 373 ~I~~~~~ 379 (403)
+|+.+++
T Consensus 222 iI~Gkk~ 228 (367)
T PF03841_consen 222 IIVGKKE 228 (367)
T ss_dssp EEEEEHH
T ss_pred EEEeCHH
Confidence 9999985
No 239
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.00 E-value=2.3e-08 Score=104.84 Aligned_cols=145 Identities=19% Similarity=0.177 Sum_probs=96.1
Q ss_pred eEEeCC-hHHHHHHHHhhhc-cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHHHHHHH
Q 015609 220 NVQPYS-CTSANFAVYTGLL-LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYEKLEEK 296 (403)
Q Consensus 220 ~V~~~S-GT~An~aal~all-~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d~Le~~ 296 (403)
+|+.++ +++|+..++.+++ ++||.|++..+.|.+.. ..+...| .+++.+++++++ ..+|+++|+++
T Consensus 140 ~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~---------~~~~~~g--~~~v~v~~~~~~~~~~d~~~l~~~ 208 (481)
T PTZ00377 140 DIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYS---------AAITLLG--GKQVPYYLDEEKGWSLDQEELEEA 208 (481)
T ss_pred hEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHH---------HHHHHcC--CEEEEEEeccccCCCCCHHHHHHH
Confidence 455554 5789999999998 79999999988765432 1223344 345666666443 46999999999
Q ss_pred hccC-----CCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccc-cc-cccC------CCCc----
Q 015609 297 AMDY-----RPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIA-AK-ELAS------PFDY---- 354 (403)
Q Consensus 297 i~~~-----~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia-~g-~~~~------p~~~---- 354 (403)
+... ++|+|++...+ +|.+.+ +++|.++|+++++++++|.+..- ++. .+ .+.. .+..
T Consensus 209 l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~-l~~~~~~~~~s~~~~~~~l~~~~~~ 287 (481)
T PTZ00377 209 YEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQE-NIYDGEKPFISFRKVLLELPAEYNT 287 (481)
T ss_pred HHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHh-hccCCCCCcccHHHHHHhhcccccC
Confidence 8642 67876555444 456666 78888999999999999998653 221 11 1111 0110
Q ss_pred -cc-EEEEcCcCCCc---CCceEEEEE
Q 015609 355 -CD-IVTSTTHKSLR---GPRGGIIFF 376 (403)
Q Consensus 355 -aD-ivt~StHKtL~---GP~GG~I~~ 376 (403)
.. +++.|+.|++. |-|.|++++
T Consensus 288 ~~~vi~~~S~SK~~~~~~GlRiG~~~~ 314 (481)
T PTZ00377 288 DVELVSFHSTSKGIIGECGRRGGYFEL 314 (481)
T ss_pred CeEEEEEecCCcccccCCcCceEEEEE
Confidence 01 45679999853 667799886
No 240
>PRK09105 putative aminotransferase; Provisional
Probab=98.98 E-value=1.3e-08 Score=103.19 Aligned_cols=193 Identities=17% Similarity=0.087 Sum_probs=123.5
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-ChHH
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPY-SCTS 228 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~-SGT~ 228 (403)
..+.|-.+++. ++|.|++++...+.. . .+|. ... .. ..|+.+++++|++++ +|.++ ++++
T Consensus 44 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~------~~Y~--~~~---~~-~Lr~aia~~~~v~~e----~I~it~Gs~~ 106 (370)
T PRK09105 44 GAVFLNANECPLGPSPAARDAAARSAAL-S------GRYD--LEL---ED-DLRTLFAAQEGLPAD----HVMAYAGSSE 106 (370)
T ss_pred CcEEecCCCCCCCCCHHHHHHHHHHHHH-h------cCCC--Cch---HH-HHHHHHHHHhCcChh----hEEEcCChHH
Confidence 34666666664 488999998876532 1 0121 111 12 246678899999875 45555 4678
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEe
Q 015609 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICG 308 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~ 308 (403)
++..++.+++++||+|++.+..|.+... .....| .+++.++.++ ++.+|++++++.. .++++|++.
T Consensus 107 ai~~~~~~l~~~gd~Vli~~P~y~~~~~---------~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~~--~~~~~v~l~ 172 (370)
T PRK09105 107 PLNYAVLAFTSPTAGLVTADPTYEAGWR---------AADAQG--APVAKVPLRA-DGAHDVKAMLAAD--PNAGLIYIC 172 (370)
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHHH---------HHHHcC--CeEEEecCCC-CCCCCHHHHHhcC--CCCCEEEEe
Confidence 9999999999999999999877654421 123344 3455555553 4679999998763 357887766
Q ss_pred CCCC--CccccHHHHHHHHHH--cCCEEEEeccccccccccccccCCCC----ccc-EEEEcCcCCCc--CCceEEEEEe
Q 015609 309 GSSY--PREWDYGRFRQIADK--CGAVLMCDMAHISGLIAAKELASPFD----YCD-IVTSTTHKSLR--GPRGGIIFFR 377 (403)
Q Consensus 309 ~s~~--g~~~Di~~I~~Iake--~Ga~LivDaAh~~Glia~g~~~~p~~----~aD-ivt~StHKtL~--GP~GG~I~~~ 377 (403)
..++ |...+.++|.++++. +++++++|.++.- ... . +.... +.+ +++.|+.|+++ |-|-|+++.+
T Consensus 173 nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~-f~~-~--~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~ 248 (370)
T PRK09105 173 NPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIH-FSD-A--PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR 248 (370)
T ss_pred CCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHH-hcc-C--cchHHHHhhCCCEEEEecccHhhcCCccceeeeecC
Confidence 5554 678888888888764 4899999999742 111 1 11111 234 55568899863 3334999986
Q ss_pred CC
Q 015609 378 RG 379 (403)
Q Consensus 378 ~~ 379 (403)
++
T Consensus 249 ~~ 250 (370)
T PRK09105 249 PD 250 (370)
T ss_pred HH
Confidence 54
No 241
>PRK06855 aminotransferase; Validated
Probab=98.97 E-value=5.3e-08 Score=100.82 Aligned_cols=146 Identities=20% Similarity=0.260 Sum_probs=93.9
Q ss_pred eEEeCC-hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHHHHHHHh
Q 015609 220 NVQPYS-CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYEKLEEKA 297 (403)
Q Consensus 220 ~V~~~S-GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d~Le~~i 297 (403)
+|+.++ +++|+..++. ++.|||.|++..+.|.++.. ......+++.+.+++++++ ..+|+++|++++
T Consensus 98 ~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~----------~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~ 166 (433)
T PRK06855 98 DIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSS----------AEAAHAGYPPVTYRLDPENNWYPDLDDLENKV 166 (433)
T ss_pred HEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHH----------HHHHhcCCeEEEEecccccCCCCCHHHHHHHH
Confidence 465555 5678877774 78999999999887755321 1111123455666665433 458999999998
Q ss_pred ccC-CCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC----Cc-ccEEEEcCcCCC
Q 015609 298 MDY-RPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF----DY-CDIVTSTTHKSL 366 (403)
Q Consensus 298 ~~~-~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~----~~-aDivt~StHKtL 366 (403)
+.. +++++++..+++ |...+ +++|.++|+++|+++++|.++.- ++..+....++ .. --+++.|+.|++
T Consensus 167 ~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~-l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~ 245 (433)
T PRK06855 167 KYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNN-IVYNGKKTVPLSEVIGDVPGIALKGISKEL 245 (433)
T ss_pred hcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccc-cccCCCCCCCHHHHcCcCCeEEEecCcccc
Confidence 643 467666554444 45555 56677889999999999998542 32222111111 11 127789999987
Q ss_pred --cCCceEEEEEe
Q 015609 367 --RGPRGGIIFFR 377 (403)
Q Consensus 367 --~GP~GG~I~~~ 377 (403)
.|-|.|+++..
T Consensus 246 ~~pGlRiG~ii~p 258 (433)
T PRK06855 246 PWPGSRCGWIEVY 258 (433)
T ss_pred CCCcceEEEEEEe
Confidence 46677999873
No 242
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=98.97 E-value=2.2e-08 Score=100.45 Aligned_cols=198 Identities=16% Similarity=0.092 Sum_probs=121.7
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC-hH
Q 015609 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYS-CT 227 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~S-GT 227 (403)
.+-+.|-.++|. .+|.+++++...+... .+||. .|. . ..|+.++++++++++ +|++++ ++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~----~~~------~-~lr~~ia~~~~~~~~----~I~it~G~~ 92 (357)
T PRK14809 30 DDLVKLSSNENPHGPSPAAVEAIREAAERV--HSYPK----ASH------A-DLTAALADRWDVSPE----QVWLANGGD 92 (357)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHhhh--hcCCC----CCH------H-HHHHHHHHHhCCCcc----eEEECCCHH
Confidence 345777766565 4788888887655321 12322 121 1 235668888898875 466655 56
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHHHHHHhccCCCcEEE
Q 015609 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEKLEEKAMDYRPKILI 306 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~Le~~i~~~~pklVi 306 (403)
+|+..++.++++|||+|++..+.+... . ......|.. ++.++++. ++..+|.+++++... ++|+|+
T Consensus 93 ~al~~~~~~~~~~gd~V~v~~P~y~~~---~------~~~~~~g~~--~~~~~l~~~~~~~~~~~~~~~~~~--~~k~i~ 159 (357)
T PRK14809 93 GALDYLARAMLDPGDTVLVPDPGFAYY---G------MSARYHHGE--VREYPVSKADDFEQTADTVLDAYD--GERIVY 159 (357)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCChHHH---H------HHHHHcCCe--EEEEecccCcCCCcCHHHHHHhhc--CCcEEE
Confidence 799999999999999999988754321 1 112333433 34444432 234578888776653 478887
Q ss_pred EeCCCC--CccccHHHHHHHHHHc--CCEEEEeccccccccccccccCCCCcc-c-EEEEcCcCCCc--CCceEEEEEeC
Q 015609 307 CGGSSY--PREWDYGRFRQIADKC--GAVLMCDMAHISGLIAAKELASPFDYC-D-IVTSTTHKSLR--GPRGGIIFFRR 378 (403)
Q Consensus 307 v~~s~~--g~~~Di~~I~~Iake~--Ga~LivDaAh~~Glia~g~~~~p~~~a-D-ivt~StHKtL~--GP~GG~I~~~~ 378 (403)
+...++ |...+.+++.+|++.+ ++++++|.++.- +...+....-++.. . +++.|+.|+++ |-|-|++++++
T Consensus 160 l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~ 238 (357)
T PRK14809 160 LTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGE-FAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE 238 (357)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhh-ccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCH
Confidence 765554 5788888888777654 889999998753 22111000001111 2 56789999873 45559999875
Q ss_pred C
Q 015609 379 G 379 (403)
Q Consensus 379 ~ 379 (403)
+
T Consensus 239 ~ 239 (357)
T PRK14809 239 E 239 (357)
T ss_pred H
Confidence 4
No 243
>PRK08636 aspartate aminotransferase; Provisional
Probab=98.97 E-value=8.1e-08 Score=98.19 Aligned_cols=148 Identities=18% Similarity=0.141 Sum_probs=94.5
Q ss_pred eEEeCCh-HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC-CCCCCCHHH----H
Q 015609 220 NVQPYSC-TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP-QTGYIDYEK----L 293 (403)
Q Consensus 220 ~V~~~SG-T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~-~~g~ID~d~----L 293 (403)
+|+.++| ++|+..++.++++|||+|++.++.+.+... .+...| .++++++++. ++..+|++. +
T Consensus 97 ~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---------~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~l 165 (403)
T PRK08636 97 EVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQ---------AFILAG--GNVHKMPLEYNEDFELDEDQFFENL 165 (403)
T ss_pred eEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHhcC--CEEEEEeccccccCccChhhhhhHH
Confidence 3666655 679999999999999999999987755431 123334 3555555532 235688774 4
Q ss_pred HHHhcc--CCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEecccccccccccc-ccC--CCCc-cc--EEEE
Q 015609 294 EEKAMD--YRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKE-LAS--PFDY-CD--IVTS 360 (403)
Q Consensus 294 e~~i~~--~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~-~~~--p~~~-aD--ivt~ 360 (403)
++++++ .++++|++..+++ |...+ +++|.++|+++++++++|.+..- +...+. .+. .++. .| +++.
T Consensus 166 ~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~-l~~~~~~~~~~~~~~~~~~~~i~~~ 244 (403)
T PRK08636 166 EKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYAD-ITFDGYKTPSILEVEGAKDVAVESY 244 (403)
T ss_pred HHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchh-hccCCCCCCChhcCCCccccEEEEE
Confidence 666653 3567777664344 45554 67778889999999999998653 221111 111 1111 23 4478
Q ss_pred cCcCCC--cCCceEEEEEeCC
Q 015609 361 TTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 361 StHKtL--~GP~GG~I~~~~~ 379 (403)
|+.|++ .|-|.|+++.+++
T Consensus 245 S~SK~~~~~GlRiG~iv~~~~ 265 (403)
T PRK08636 245 TLSKSYNMAGWRVGFVVGNKK 265 (403)
T ss_pred ecccccCCccceeeeeeCCHH
Confidence 999998 4667799987654
No 244
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=98.97 E-value=2e-08 Score=100.82 Aligned_cols=194 Identities=15% Similarity=0.128 Sum_probs=115.7
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCh-HH
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSC-TS 228 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SG-T~ 228 (403)
.-+.|..++|. +++.|++++...+... ..||.. + .+ ..|+.++++++++++ +|++++| ++
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~~--~~y~~~----~------~~-~lr~~ia~~~~~~~~----~i~it~Ga~~ 83 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDCA--ERYPDV----E------YR-HLHQALARHHQVPAS----WILAGNGETE 83 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHhc--ccCcCc----c------HH-HHHHHHHHHhCcChh----hEEECCCHHH
Confidence 34777777776 5888999987655421 122211 1 22 246778899999875 4666654 56
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCC-CCCHHHHHHHhccCCCcEEEE
Q 015609 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTG-YIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g-~ID~d~Le~~i~~~~pklViv 307 (403)
++..++.++ .+||.|+ ....+.... ..+...| .+++.++.+++++ .+| +++++.+. .++|+|++
T Consensus 84 ~l~~~~~~l-~~g~viv-~~P~y~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~~-~~~~~~~~-~~~k~v~l 148 (356)
T PRK08056 84 SIFAVVSGL-KPRRAMI-VTPGFAEYR---------RALQQVG--CEIRRYSLREADGWQLT-DAILEALT-PDLDCLFL 148 (356)
T ss_pred HHHHHHHHh-CCCCEEE-eCCCcHHHH---------HHHHHcC--CeEEEEecccccCCCcc-HHHHHhcc-CCCCEEEE
Confidence 887777765 7787544 443322111 1223334 3555665553333 455 35555554 46888877
Q ss_pred eCCCC--Ccccc---HHHHHHHHHHcCCEEEEecccccccccccc-ccCCCC--cccEEEEcCcCCCc--CCceEEEEEe
Q 015609 308 GGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKE-LASPFD--YCDIVTSTTHKSLR--GPRGGIIFFR 377 (403)
Q Consensus 308 ~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~-~~~p~~--~aDivt~StHKtL~--GP~GG~I~~~ 377 (403)
...++ |...+ +++|.++|+++|+++++|.+.. .+...+. ....+. ...+++.|++|+++ |-|-|+++..
T Consensus 149 ~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 227 (356)
T PRK08056 149 CTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFI-DFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNS 227 (356)
T ss_pred eCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchh-ccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecC
Confidence 65444 56677 7888999999999999999842 2221110 001111 24688899999863 3345998875
Q ss_pred C
Q 015609 378 R 378 (403)
Q Consensus 378 ~ 378 (403)
+
T Consensus 228 ~ 228 (356)
T PRK08056 228 D 228 (356)
T ss_pred C
Confidence 4
No 245
>PRK08175 aminotransferase; Validated
Probab=98.96 E-value=7.1e-08 Score=98.28 Aligned_cols=146 Identities=16% Similarity=0.081 Sum_probs=95.5
Q ss_pred eEEeCCh-HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhc
Q 015609 220 NVQPYSC-TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAM 298 (403)
Q Consensus 220 ~V~~~SG-T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~ 298 (403)
++++++| ++++..++.++++|||+|++....+..+.. .....| .+++.++++++ ..+.++++++++
T Consensus 93 ~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~---------~~~~~g--~~~~~v~~~~~--~~~~~~l~~~l~ 159 (395)
T PRK08175 93 EAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIY---------GAVIAG--AQVRSVPLVEG--VDFFNELERAIR 159 (395)
T ss_pred cEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHHcC--CeEEEEecccC--CCcHHHHHHHHh
Confidence 3555655 578888888899999999999877654321 122334 45566666543 345888988886
Q ss_pred cC--CCcEEEEeCCC--CCccccH---HHHHHHHHHcCCEEEEeccccccccccccccCC---CC-ccc--EEEEcCcCC
Q 015609 299 DY--RPKILICGGSS--YPREWDY---GRFRQIADKCGAVLMCDMAHISGLIAAKELASP---FD-YCD--IVTSTTHKS 365 (403)
Q Consensus 299 ~~--~pklViv~~s~--~g~~~Di---~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p---~~-~aD--ivt~StHKt 365 (403)
.. ++++|++...+ +|...+. ++|.++|+++|+++++|.++.-- ...+....+ ++ ..| +++.|+.|.
T Consensus 160 ~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 238 (395)
T PRK08175 160 ESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADI-VYDGWKAPSIMQVPGAKDVAVEFFTLSKS 238 (395)
T ss_pred hccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhh-ccCCCCCcchhcCCCcccCEEEEeecccc
Confidence 43 57888776433 4566666 78888999999999999997542 211111111 11 123 567899999
Q ss_pred Cc--CCceEEEEEeCC
Q 015609 366 LR--GPRGGIIFFRRG 379 (403)
Q Consensus 366 L~--GP~GG~I~~~~~ 379 (403)
|+ |-|.|+++.+++
T Consensus 239 ~g~pGlRiG~~~~~~~ 254 (395)
T PRK08175 239 YNMAGWRIGFMVGNPE 254 (395)
T ss_pred ccCcchhheeeeCCHH
Confidence 73 334588887653
No 246
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=98.96 E-value=3.7e-08 Score=100.05 Aligned_cols=190 Identities=17% Similarity=0.128 Sum_probs=107.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh----cc
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL----LL 239 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al----l~ 239 (403)
+|+|.+|+...+...+.. +..+ ..+...++ .++++++++.+. .+++.||++||.++++++ ..
T Consensus 49 ~p~v~~a~~~~~~~~~~~---~~~~--~~~~~~~l----a~~l~~~~~~~~-----v~~~~sGseA~~~al~~ar~~~~~ 114 (389)
T PRK01278 49 HPHLVEALKEQAEKLWHV---SNLY--RIPEQERL----AERLVENSFADK-----VFFTNSGAEAVECAIKTARRYHYG 114 (389)
T ss_pred CHHHHHHHHHHHHhcCcc---cccc--CChHHHHH----HHHHHhhCCCCE-----EEEcCCcHHHHHHHHHHHHHHHHh
Confidence 677777776665432211 1111 12333333 345777776543 355678999999998876 45
Q ss_pred CCC----eEEecCCCCCccccccccCCccchhhhcccceEEeee-ecCCC---CCCCCHHHHHHHhccCCCcEEEEeCCC
Q 015609 240 PGD----RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPY-KVNPQ---TGYIDYEKLEEKAMDYRPKILICGGSS 311 (403)
Q Consensus 240 pGD----~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~-~vd~~---~g~ID~d~Le~~i~~~~pklViv~~s~ 311 (403)
+|| +|++.+..+.|... + .+...+.......+ +..++ -...|++++++++.+ ++++|++++..
T Consensus 115 ~G~~~r~~vi~~~~~yhg~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~avivep~~ 185 (389)
T PRK01278 115 KGHPERYRIITFEGAFHGRTL-A-------TIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP-NTAAILIEPIQ 185 (389)
T ss_pred cCCCCCCEEEEECCCcCCCcH-H-------HHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC-CeEEEEEeccc
Confidence 676 89888766543321 1 11111110000000 00000 013689999999864 67888887543
Q ss_pred C--C-c---cccHHHHHHHHHHcCCEEEEeccccccccccccc-c-CCCC-cccEEEEcCcCCCc-CCceEEEEEeCC
Q 015609 312 Y--P-R---EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL-A-SPFD-YCDIVTSTTHKSLR-GPRGGIIFFRRG 379 (403)
Q Consensus 312 ~--g-~---~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~-~-~p~~-~aDivt~StHKtL~-GP~GG~I~~~~~ 379 (403)
. | . ...+++|+++|+++|++|++|.+|. |+...+.. . ..+. ..|++ ++.|.|. |.+.|+++++++
T Consensus 186 ~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~~ 260 (389)
T PRK01278 186 GEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGVTPDIM--AVAKGIGGGFPLGACLATEE 260 (389)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCCCCCEE--EEehhccCCcceEEEEEcHH
Confidence 2 2 1 2378999999999999999999987 44222211 1 0111 25665 5679984 335577777654
No 247
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.95 E-value=7.2e-08 Score=98.07 Aligned_cols=206 Identities=18% Similarity=0.177 Sum_probs=120.2
Q ss_pred hcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC----CCCCCCcceEEeC
Q 015609 151 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD----LDSDNWGVNVQPY 224 (403)
Q Consensus 151 ~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg----~~~~~~~v~V~~~ 224 (403)
+..+.|--+++. .++.+++++...+... ..|+. ..|... +-+...+.+.+.+| .+++ -+|+.+
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~--~~Y~~---~~G~~~---lr~aia~~~~~~~~~~~~~~~~---~~i~it 96 (393)
T TIGR03538 28 KPPIALSIGEPKHPTPAFVLEALRENLHGL--STYPT---TKGLPE---LRQAIARWLERRFDLPTGVDPE---RHVLPV 96 (393)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhcc--CCCCC---CCCCHH---HHHHHHHHHHHhhCCcccCCCC---ceEEEC
Confidence 455666555444 4778888888655321 11211 123221 11111122333334 3332 145555
Q ss_pred C-hHHHHHHHHhhhccCCCe--EEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHHHHHHHhccC
Q 015609 225 S-CTSANFAVYTGLLLPGDR--IMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYEKLEEKAMDY 300 (403)
Q Consensus 225 S-GT~An~aal~all~pGD~--VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d~Le~~i~~~ 300 (403)
+ +++|+..++.++++|||+ |++....+.+.. ......| .+++.+++++++ ..+|++++++++.+
T Consensus 97 ~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~~~~- 164 (393)
T TIGR03538 97 NGTREALFAFAQAVINPGQAPLVVMPNPFYQIYE---------GAALLAG--AEPYFLNCTAENGFLPDFDAVPESVWR- 164 (393)
T ss_pred CCcHHHHHHHHHHHcCCCCcceEEecCCCCcchH---------HHHHhcC--CeEEEeeccccCCCCCCHHHHHHHHhh-
Confidence 5 577999999999999996 777766543321 1122334 455666665443 45899999988764
Q ss_pred CCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccc-cccCC------CC---c-ccEEEEcCcC
Q 015609 301 RPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAK-ELASP------FD---Y-CDIVTSTTHK 364 (403)
Q Consensus 301 ~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g-~~~~p------~~---~-aDivt~StHK 364 (403)
++|+|++...++ |...+ +++|.++|+++++++++|.+..--..... ..+.. .. + --+++.|+.|
T Consensus 165 ~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 244 (393)
T TIGR03538 165 RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSK 244 (393)
T ss_pred cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchh
Confidence 688887765454 45555 77888889999999999998653211100 01010 00 0 1177889999
Q ss_pred CC--cCCceEEEEEeCC
Q 015609 365 SL--RGPRGGIIFFRRG 379 (403)
Q Consensus 365 tL--~GP~GG~I~~~~~ 379 (403)
.+ .|-|-|++++++.
T Consensus 245 ~~~~~GlRvG~~i~~~~ 261 (393)
T TIGR03538 245 RSNLPGLRSGFVAGDAE 261 (393)
T ss_pred hcCCcccceEEEecCHH
Confidence 64 5666799988653
No 248
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=98.94 E-value=2.4e-08 Score=105.55 Aligned_cols=152 Identities=18% Similarity=0.157 Sum_probs=98.1
Q ss_pred CCCCCCcceEEeC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhh-hcccceEEeeeecCCC-CCCC
Q 015609 212 LDSDNWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVS-AASIFFESFPYKVNPQ-TGYI 288 (403)
Q Consensus 212 ~~~~~~~v~V~~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~-~~g~~~~vv~~~vd~~-~g~I 288 (403)
++++ +|+.+ ++++|+..++.++++|||.|++..+.|.+... .+. ..| .++++++++.+ +..+
T Consensus 117 v~pe----~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~---------~~~~~~G--~~vv~v~~~~~~~~~~ 181 (496)
T PLN02376 117 FDPE----RVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDR---------DLRWRTG--VEIIPVPCSSSDNFKL 181 (496)
T ss_pred CChh----hEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHH---------HHHhhCC--CEEEEEeCCCCccCcC
Confidence 5554 35555 56789999999999999999999988766431 122 123 45666666432 3578
Q ss_pred CHHHHHHHhc-----cCCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCC--C----
Q 015609 289 DYEKLEEKAM-----DYRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASP--F---- 352 (403)
Q Consensus 289 D~d~Le~~i~-----~~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p--~---- 352 (403)
|++++++.++ ..++|+|++..+++ |.+.+ +++|.++|+++++++|+|.++..-......+... +
T Consensus 182 ~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~ 261 (496)
T PLN02376 182 TVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDV 261 (496)
T ss_pred CHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccc
Confidence 9999986542 13678776654444 56666 5667788899999999999976532211111110 1
Q ss_pred C--c--cc--EEEEcCcCCC--cCCceEEEEEeC
Q 015609 353 D--Y--CD--IVTSTTHKSL--RGPRGGIIFFRR 378 (403)
Q Consensus 353 ~--~--aD--ivt~StHKtL--~GP~GG~I~~~~ 378 (403)
+ . .+ +++.|+.|.| .|-|-|+++...
T Consensus 262 ~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~ 295 (496)
T PLN02376 262 DISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFN 295 (496)
T ss_pred cccccCCCeEEEEEeccccCCCCcceEEEEEECC
Confidence 1 0 12 3468999987 456679999854
No 249
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.93 E-value=1.6e-08 Score=114.02 Aligned_cols=151 Identities=14% Similarity=0.087 Sum_probs=102.9
Q ss_pred HHHHHHHHcCCCCCCCcceEEeC-ChHHHHHHHHhhh-ccCC--CeEEecCCCCCccccccccCCccchhhhcccceEEe
Q 015609 202 CFERALKAFDLDSDNWGVNVQPY-SCTSANFAVYTGL-LLPG--DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESF 277 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~-SGT~An~aal~al-l~pG--D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv 277 (403)
.+..+++|.|++.+ ++.+. ++|.+..++++++ ++++ |+|++++.+|...+... +. .....+++++
T Consensus 126 ~Qt~la~LtG~~~a----naSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~------~t-~a~~~G~ev~ 194 (954)
T PRK05367 126 FQTMVADLTGLEIA----NASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVL------RT-RAEPLGIEVV 194 (954)
T ss_pred HHHHHHHHHCCChh----hccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHH------HH-HHHhCCCEEE
Confidence 57789999999974 55554 6788888888776 5554 99999998876543210 01 1112345666
Q ss_pred eeecCCCCCCCCHHHHHHHhccCCCcEEEEe-CCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cc
Q 015609 278 PYKVNPQTGYIDYEKLEEKAMDYRPKILICG-GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YC 355 (403)
Q Consensus 278 ~~~vd~~~g~ID~d~Le~~i~~~~pklViv~-~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~a 355 (403)
.++++. |++ ..+...+++. .+.+|.+.|+++|+++||++|+++++|+.|.+..+. ..|-+ +|
T Consensus 195 ~~~~~~-----d~~-------~~~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l----~~pge~Ga 258 (954)
T PRK05367 195 VGDAAK-----ALD-------HDDVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLL----TPPGEMGA 258 (954)
T ss_pred EecCcc-----CCC-------cccEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCC----CChhhcCC
Confidence 555432 111 1123334443 456788899999999999999999999988544332 12323 49
Q ss_pred cEEEEcCcCC-----CcCCceEEEEEeCC
Q 015609 356 DIVTSTTHKS-----LRGPRGGIIFFRRG 379 (403)
Q Consensus 356 Divt~StHKt-----L~GP~GG~I~~~~~ 379 (403)
||+++++||| ++||..|+++++++
T Consensus 259 Di~vgs~qkfg~P~g~GGP~aGflavr~~ 287 (954)
T PRK05367 259 DIAVGSAQRFGVPMGFGGPHAAYFAVRDA 287 (954)
T ss_pred CEEEeeCcccCCCCCCCCCCEEEEEECHH
Confidence 9999999999 78887799998875
No 250
>PLN02231 alanine transaminase
Probab=98.92 E-value=7.2e-08 Score=102.76 Aligned_cols=206 Identities=12% Similarity=0.066 Sum_probs=118.8
Q ss_pred cccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeC-ChHH
Q 015609 152 KGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD--LDSDNWGVNVQPY-SCTS 228 (403)
Q Consensus 152 ~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--~~~~~~~v~V~~~-SGT~ 228 (403)
.-|++-+++...+..+++.....+..........-....|.... -+...+.+.+..| ++++ +|+.+ ++++
T Consensus 130 ~~i~~~~~~~~fp~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~l---ReaIA~~~~~r~g~~~~pe----~I~iT~Ga~~ 202 (534)
T PLN02231 130 SLLDKSETHGLFSADAIERAWQILDQIPGRATGAYSHSQGIKGL---RDAIAAGIEARDGFPADPN----DIFLTDGASP 202 (534)
T ss_pred ccCCCCCccccCCHHHHHHHHHHHHhcCCccccCcCCCCCcHHH---HHHHHHHHHhccCCCCCcc----cEEEeCCHHH
Confidence 44555555555666777766655543221000000112333221 1111122333334 3343 45555 5678
Q ss_pred HHHHHHhhhcc-CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHHHHHHHhccC-----C
Q 015609 229 ANFAVYTGLLL-PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYEKLEEKAMDY-----R 301 (403)
Q Consensus 229 An~aal~all~-pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d~Le~~i~~~-----~ 301 (403)
|+..++.+++. +||.|++....|..+.. .+...| .++++|.+++++ ..+|+++|++++++. +
T Consensus 203 ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~---------~~~~~g--~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~ 271 (534)
T PLN02231 203 AVHMMMQLLIRSEKDGILCPIPQYPLYSA---------SIALHG--GTLVPYYLDEATGWGLEISELKKQLEDARSKGIT 271 (534)
T ss_pred HHHHHHHHhccCCCCEEEEeCCCChhHHH---------HHHHcC--CEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCC
Confidence 99999999984 89999999887755431 223334 356677666543 479999999988652 5
Q ss_pred CcEEEEeCCC--CCccc---cHHHHHHHHHHcCCEEEEeccccccccc-cccccCCC---------Cc--cc-EEEEcCc
Q 015609 302 PKILICGGSS--YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIA-AKELASPF---------DY--CD-IVTSTTH 363 (403)
Q Consensus 302 pklViv~~s~--~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia-~g~~~~p~---------~~--aD-ivt~StH 363 (403)
+|+|++..++ +|.++ .+++|.++|+++|++|++|.++.- ++. .+....++ .. .. +++.|+.
T Consensus 272 ~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~-l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~S 350 (534)
T PLN02231 272 VRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQE-NVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVS 350 (534)
T ss_pred eEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchh-cccCCCCCcccHHHHHhhhccccCCceEEEEeccC
Confidence 7776655434 35555 567888899999999999998653 221 11100011 01 12 4456999
Q ss_pred CCC---cCCceEEEEE
Q 015609 364 KSL---RGPRGGIIFF 376 (403)
Q Consensus 364 KtL---~GP~GG~I~~ 376 (403)
|.+ +|-|+|+++.
T Consensus 351 K~~~g~pGlRiGy~~~ 366 (534)
T PLN02231 351 KGYYGECGKRGGYMEV 366 (534)
T ss_pred cccccCCccceEEEEE
Confidence 975 4788899876
No 251
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=98.90 E-value=5.9e-08 Score=99.09 Aligned_cols=184 Identities=15% Similarity=0.101 Sum_probs=106.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc----
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL---- 239 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~---- 239 (403)
+|.|.+++...+.. +.. ..+.+ .++...+++ ++++++++.+. .++++||++||.+++..+..
T Consensus 58 ~p~v~~ai~~~~~~-~~~---~~~~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~~~ 123 (396)
T PRK04073 58 HPKIIQALKDQADK-VTL---TSRAF-HSDQLGPWY----EKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWAYD 123 (396)
T ss_pred CHHHHHHHHHHHhh-ccc---ccccc-CCHHHHHHH----HHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHhhh
Confidence 67777777665532 211 11111 122223333 45778877643 46678999999999886531
Q ss_pred -----CC-CeEEecCCCCCccccccccCCccchhhhcccc-----eE-----EeeeecCCCCCCCCHHHHHHHhccCCCc
Q 015609 240 -----PG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-----FE-----SFPYKVNPQTGYIDYEKLEEKAMDYRPK 303 (403)
Q Consensus 240 -----pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-----~~-----vv~~~vd~~~g~ID~d~Le~~i~~~~pk 303 (403)
+| ++|++....+.|... + .+++.+.. +. +..++ ..|++++++++.+ +++
T Consensus 124 ~~g~~~~r~~ii~~~~~~HG~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~-~~~ 188 (396)
T PRK04073 124 VKGVEPNKAEIIACEGNFHGRTM-A-------AVSLSSEEEYKRGFGPMLPGIKKIP------YGDLEALKAAITP-NTA 188 (396)
T ss_pred ccCCCCCCCEEEEECCCcCCCCH-H-------HHhhcCCcccccCCCCCCCCceEeC------CCCHHHHHHhccc-CeE
Confidence 34 678887655433321 1 11111110 00 11111 2378999988863 578
Q ss_pred EEEEeCCC--CCcccc----HHHHHHHHHHcCCEEEEecccccccccccc-cc-CCCC-cccEEEEcCcCCCcCC--ceE
Q 015609 304 ILICGGSS--YPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKE-LA-SPFD-YCDIVTSTTHKSLRGP--RGG 372 (403)
Q Consensus 304 lViv~~s~--~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~-~~-~p~~-~aDivt~StHKtL~GP--~GG 372 (403)
+|++++.. .|...+ +++|.++|+++|+++++|.+|. |+...+. .. ...+ ..|++++ .|.++++ +.|
T Consensus 189 ~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~pdi~~~--sK~lg~gg~~ig 265 (396)
T PRK04073 189 AFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDWDNVTPDMYIL--GKALGGGVFPIS 265 (396)
T ss_pred EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcCcHHHHhhhcCCCCCEEEe--cccccCCCCcce
Confidence 88887543 354444 8999999999999999999988 3322221 11 1111 2687775 5998654 457
Q ss_pred EEEEeCC
Q 015609 373 IIFFRRG 379 (403)
Q Consensus 373 ~I~~~~~ 379 (403)
+++++++
T Consensus 266 ~~~~~~~ 272 (396)
T PRK04073 266 CVAANRD 272 (396)
T ss_pred EEEEcHH
Confidence 7777654
No 252
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=98.90 E-value=1.2e-08 Score=101.61 Aligned_cols=150 Identities=19% Similarity=0.152 Sum_probs=93.9
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCChHH-HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015609 202 CFERALKAFDLDSDNWGVNVQPYSCTS-ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SGT~-An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
.|+++++++|.+++ +|++++|++ ++.++ ..++.+| +|++....|.++.. .+...| ++++.++
T Consensus 52 lr~~la~~~~~~~~----~i~~t~G~~~~i~~~-~~~l~~g-~vl~~~p~y~~~~~---------~~~~~g--~~~~~~~ 114 (330)
T TIGR01140 52 LRAAAAAYYGLPAA----SVLPVNGAQEAIYLL-PRLLAPG-RVLVLAPTYSEYAR---------AWRAAG--HEVVELP 114 (330)
T ss_pred HHHHHHHHhCCChh----hEEECCCHHHHHHHH-HHHhCCC-eEEEeCCCcHHHHH---------HHHHcC--CEEEEeC
Confidence 46678899998764 577777665 55554 4456788 67777665543321 122223 4444432
Q ss_pred cCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCCC--
Q 015609 281 VNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-- 353 (403)
Q Consensus 281 vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-- 353 (403)
|+++++++++ ++++|++..++ +|..+| +++|.++|+++|+++++|.++.... .......-.+
T Consensus 115 --------d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~-~~~~~~~~~~~~ 183 (330)
T TIGR01140 115 --------DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFT-PDASLAPQAARF 183 (330)
T ss_pred --------CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccC-CccchhhHhccC
Confidence 7899998884 46666555443 456777 6667788899999999999986332 2110000001
Q ss_pred cccEEEEcCcCCCcCC--ceEEEEEeCC
Q 015609 354 YCDIVTSTTHKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 354 ~aDivt~StHKtL~GP--~GG~I~~~~~ 379 (403)
..++++.|++|+++.| +-|+++.+++
T Consensus 184 ~~~i~~~S~SK~~g~~G~R~G~i~~~~~ 211 (330)
T TIGR01140 184 PGLVVLRSLTKFFGLAGLRLGFVVAHPA 211 (330)
T ss_pred CCEEEEEecchhhcCchhhhhheeCCHH
Confidence 2458899999987423 2388888664
No 253
>PRK09148 aminotransferase; Validated
Probab=98.90 E-value=2.8e-07 Score=94.49 Aligned_cols=206 Identities=15% Similarity=0.103 Sum_probs=114.2
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCC-h
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDL--DSDNWGVNVQPYS-C 226 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~--~~~~~~v~V~~~S-G 226 (403)
..|.|-.++.. .++.+++++...+.+.....|+. ..|.. ++.+...+.+.+.+|. +++ -+|+.++ +
T Consensus 31 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~aia~~~~~~~g~~~~~~---~~I~it~G~ 101 (405)
T PRK09148 31 DIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSA---SKGIP---GLRRAQAAYYARRFGVKLNPD---TQVVATLGS 101 (405)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCC---CCCCH---HHHHHHHHHHHHHhCCCCCCC---CcEEEcCCh
Confidence 34666544432 36778888776543211111211 12332 1211112223333353 332 1355555 5
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc--CCCcE
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD--YRPKI 304 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~--~~pkl 304 (403)
++|+..++.+++.+||+|++....|.+... .....| .++++++++.++. ++++++++++. .++++
T Consensus 102 ~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---------~~~~~g--~~v~~v~~~~~~~--~~~~l~~~~~~~~~~~~~ 168 (405)
T PRK09148 102 KEGFANMAQAITAPGDVILCPNPSYPIHAF---------GFIMAG--GVIRSVPAEPDEE--FFPALERAVRHSIPKPIA 168 (405)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcccHH---------HHHhcC--CEEEEEeCCCCCC--CccCHHHHHhhccccceE
Confidence 789999999999999999999887655321 122334 3556666654322 34445555432 35677
Q ss_pred EEEeCCC--CCccccH---HHHHHHHHHcCCEEEEeccccccccccccccCC--CC---cccEEEEcCcCCCc--CCceE
Q 015609 305 LICGGSS--YPREWDY---GRFRQIADKCGAVLMCDMAHISGLIAAKELASP--FD---YCDIVTSTTHKSLR--GPRGG 372 (403)
Q Consensus 305 Viv~~s~--~g~~~Di---~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p--~~---~aDivt~StHKtL~--GP~GG 372 (403)
|++..++ +|...+. ++|.++|+++|+++++|.++.--.......+.. ++ ...+++.|+.|+++ |-|-|
T Consensus 169 v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G 248 (405)
T PRK09148 169 LIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMG 248 (405)
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchhee
Confidence 7776544 4556665 677888999999999999976422111111111 11 12356899999873 44569
Q ss_pred EEEEeCC
Q 015609 373 IIFFRRG 379 (403)
Q Consensus 373 ~I~~~~~ 379 (403)
+++.++.
T Consensus 249 ~~v~~~~ 255 (405)
T PRK09148 249 FAVGNER 255 (405)
T ss_pred eeeCCHH
Confidence 9987653
No 254
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=98.89 E-value=1.9e-08 Score=101.71 Aligned_cols=162 Identities=12% Similarity=0.017 Sum_probs=104.8
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCh-HHHHHHHHhhhccCC-CeEEecCCCCCccccccccCCccchhhhcccceEEeee
Q 015609 202 CFERALKAFDLDSDNWGVNVQPYSC-TSANFAVYTGLLLPG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPY 279 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SG-T~An~aal~all~pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~ 279 (403)
.|+.+++++|++++ +|++++| ++++..++.+++.+| |+|++....++... ......| .+++++
T Consensus 64 lr~~ia~~~~~~~~----~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~---------~~~~~~g--~~~~~v 128 (364)
T PRK04781 64 LRSALAALYGCAPE----QLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA---------VCARLQN--APLVEV 128 (364)
T ss_pred HHHHHHHHhCcChH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH---------HHHHHcC--CEEEEE
Confidence 46678899999874 5766665 679999999999999 78888775542211 1112334 355555
Q ss_pred ecCC-C-CCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHH--cCCEEEEeccccccccccccccCCCC
Q 015609 280 KVNP-Q-TGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADK--CGAVLMCDMAHISGLIAAKELASPFD 353 (403)
Q Consensus 280 ~vd~-~-~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake--~Ga~LivDaAh~~Glia~g~~~~p~~ 353 (403)
+++. + +..+|++++++.+...++++|++...++ |...+.+++.++++. .++++++|.+..- +.........++
T Consensus 129 ~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~-f~~~~~~~~~~~ 207 (364)
T PRK04781 129 PLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGE-FSDVPSAVGLLA 207 (364)
T ss_pred ecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchh-hcCCcchHHHHh
Confidence 5532 2 2357999987666555789888765444 678898888888775 3789999998652 221110000011
Q ss_pred ccc--EEEEcCcCCC--cCCceEEEEEeCC
Q 015609 354 YCD--IVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 354 ~aD--ivt~StHKtL--~GP~GG~I~~~~~ 379 (403)
..| +++.|+.|++ .|-|-|+++.+++
T Consensus 208 ~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~ 237 (364)
T PRK04781 208 RYDNLAVLRTLSKAHALAAARIGSLIANAE 237 (364)
T ss_pred hCCCEEEEecChhhcccccceeeeeeCCHH
Confidence 112 6678999986 3666699998754
No 255
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=98.87 E-value=1.1e-07 Score=97.36 Aligned_cols=210 Identities=14% Similarity=0.089 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHh--hhcccceeccCcc--CcHHHHHHHHHHhhhcC----CCCCCCCccccchHHHHHHHHHHHHHHHHH
Q 015609 138 EIFDIMEKEKQR--QFKGIELIASENF--VCRAVMEALGSHLTNKY----SEGYPGARYYTGNQYIDQIENLCFERALKA 209 (403)
Q Consensus 138 ei~~li~~e~~r--q~~~l~LiaSen~--~~p~V~eA~~s~l~~~y----~eG~pgsr~~~G~~~~~~lE~~arerla~l 209 (403)
++.+++.+.+.. ..+.+.|-.+++. +++.+.+++...+.... ..+|. ...|.. . .|+.++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~---~~~G~~---~----LR~aia~~ 88 (409)
T PRK07590 19 EIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYG---PEQGYD---F----LREKIAEN 88 (409)
T ss_pred HHHHHHHHHhhhcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCC---CCCCCH---H----HHHHHHHH
Confidence 455555554333 2345677666554 47788888877664311 01111 112332 1 23334443
Q ss_pred c------CCCCCCCcceEEeCChH-HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccc---------
Q 015609 210 F------DLDSDNWGVNVQPYSCT-SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF--------- 273 (403)
Q Consensus 210 f------g~~~~~~~v~V~~~SGT-~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~--------- 273 (403)
+ +++++ +|+.++|+ +|+.++ ..++.|||+|++..+.|.+... .+...|..
T Consensus 89 ~~~~~g~~~~~~----~I~it~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~---------~~~~~g~~~~~~~~~~~ 154 (409)
T PRK07590 89 DYQARGCDISAD----EIFISDGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYVD---------TNVMAGRTGEANEDGRY 154 (409)
T ss_pred HHHhcCCcCChh----hEEECCCHHHHHHHH-HHhcCCCCEEEEeCCCCcchHH---------HHHHcCCcccccccccc
Confidence 2 45654 46666665 566654 5667999999999887755432 12223321
Q ss_pred eEEeeeecCCCCC-CCCHHHHHHHhccCCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEecccccccccccc
Q 015609 274 FESFPYKVNPQTG-YIDYEKLEEKAMDYRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKE 347 (403)
Q Consensus 274 ~~vv~~~vd~~~g-~ID~d~Le~~i~~~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~ 347 (403)
.++++++++++++ .+|++ +.++|+|++..+++ |..++ +++|.++|+++++++++|.++.- +...+.
T Consensus 155 ~~~~~v~~~~~~~~~~d~~-------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~-~~~~~~ 226 (409)
T PRK07590 155 SGIVYLPCTAENNFVPELP-------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEA-FISDPS 226 (409)
T ss_pred cceeEeecccccCCcccCc-------ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchh-hccCCC
Confidence 1256666654322 23322 24688887765454 45554 56777889999999999998763 222121
Q ss_pred ccCCC---Cc-cc--EEEEcCcCCC--cCCceEEEEEeCC
Q 015609 348 LASPF---DY-CD--IVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 348 ~~~p~---~~-aD--ivt~StHKtL--~GP~GG~I~~~~~ 379 (403)
.+.++ +. -+ +++.|+.|++ .|-|-|+++..+.
T Consensus 227 ~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~ 266 (409)
T PRK07590 227 LPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKE 266 (409)
T ss_pred CCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCHH
Confidence 11111 11 12 5578999987 4556699988653
No 256
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=98.85 E-value=8.5e-08 Score=100.40 Aligned_cols=146 Identities=21% Similarity=0.173 Sum_probs=102.6
Q ss_pred eEEeCCh-HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhc
Q 015609 220 NVQPYSC-TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAM 298 (403)
Q Consensus 220 ~V~~~SG-T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~ 298 (403)
+|+.|+| ++|+.+++..+++|||+|++-++.|.+.+. .+...| ++++++++|. .-+|+++|++.++
T Consensus 157 ~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~---------~~~~~g--~~~~~vp~d~--~G~~~e~le~~~~ 223 (459)
T COG1167 157 QIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQ---------ALEALG--ARVIPVPVDE--DGIDPEALEEALA 223 (459)
T ss_pred eEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH---------HHHHcC--CcEEecCCCC--CCCCHHHHHHHHh
Confidence 4665655 579999999999999999998887755431 223333 5667777763 4599999999999
Q ss_pred cCCCcEEEEeCC-C--CCccccH---HHHHHHHHHcCCEEEEeccccccccccccccCCCCc-----ccEEEEcCcCCC-
Q 015609 299 DYRPKILICGGS-S--YPREWDY---GRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDY-----CDIVTSTTHKSL- 366 (403)
Q Consensus 299 ~~~pklViv~~s-~--~g~~~Di---~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~-----aDivt~StHKtL- 366 (403)
..+||++++.++ . +|...+. ++|.++|+++++++|.|...+-= ...+.-+.++.. -=++++|+.|+|
T Consensus 224 ~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el-~~~~~p~~~l~~ld~~~rViy~gSFSK~l~ 302 (459)
T COG1167 224 QWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGEL-RYDGPPPPPLKALDAPGRVIYLGSFSKTLA 302 (459)
T ss_pred hcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhh-hcCCCCCCChHhhCCCCCEEEEeeehhhcc
Confidence 888999988654 2 3555554 57889999999999999964431 111111112221 127789999997
Q ss_pred cCCceEEEEEeCC
Q 015609 367 RGPRGGIIFFRRG 379 (403)
Q Consensus 367 ~GP~GG~I~~~~~ 379 (403)
+|-+-|+|+...+
T Consensus 303 PglRlG~vv~p~~ 315 (459)
T COG1167 303 PGLRLGYVVAPPE 315 (459)
T ss_pred cccceeeeeCCHH
Confidence 5667799998764
No 257
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=98.85 E-value=9.5e-08 Score=100.18 Aligned_cols=148 Identities=18% Similarity=0.091 Sum_probs=96.7
Q ss_pred eEEeCCh-HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhh-hcccceEEeeeecCC-CCCCCCHHHHHHH
Q 015609 220 NVQPYSC-TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVS-AASIFFESFPYKVNP-QTGYIDYEKLEEK 296 (403)
Q Consensus 220 ~V~~~SG-T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~-~~g~~~~vv~~~vd~-~~g~ID~d~Le~~ 296 (403)
+|+.++| ++++..++.++++|||.|++..+.|.+... .+. ..| .++++++.++ ++..+|+++++++
T Consensus 113 ~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~---------~~~~~~g--~~~v~v~~~~~~~~~~~~~~le~~ 181 (468)
T PLN02450 113 KLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDR---------DLKWRTG--VEIVPIHCSSSNGFQITESALEEA 181 (468)
T ss_pred HeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHH---------HHhhcCC--cEEEEEecCCccCCcCCHHHHHHH
Confidence 4666654 678989999999999999999887655421 112 123 4566666643 3446889999988
Q ss_pred hcc-----CCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccc-cccCCC------------C
Q 015609 297 AMD-----YRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAK-ELASPF------------D 353 (403)
Q Consensus 297 i~~-----~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g-~~~~p~------------~ 353 (403)
+++ .++|+|++..+++ |...+ +++|.++|+++++++++|.+.+. +...+ .....+ .
T Consensus 182 ~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~-~~f~~~~~~s~l~~~~~~~~~~~~~ 260 (468)
T PLN02450 182 YQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSG-TVFDSPGFVSVMEVLKDRKLENTDV 260 (468)
T ss_pred HHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccc-cccCCCCcccHHHHhhhcccccCCC
Confidence 764 3678776664444 45554 56677888999999999998652 21111 111100 0
Q ss_pred cc-cEEEEcCcCCC--cCCceEEEEEeCC
Q 015609 354 YC-DIVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 354 ~a-Divt~StHKtL--~GP~GG~I~~~~~ 379 (403)
.- =+++.|+.|.+ .|-|-|++++.+.
T Consensus 261 ~~~vi~l~S~SK~~~l~GlRiG~li~~~~ 289 (468)
T PLN02450 261 SNRVHIVYSLSKDLGLPGFRVGAIYSNDE 289 (468)
T ss_pred CCcEEEEEeccccCCCCCccEEEEEECCH
Confidence 11 15678999986 5667799998743
No 258
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.85 E-value=1.1e-07 Score=95.56 Aligned_cols=204 Identities=18% Similarity=0.108 Sum_probs=113.0
Q ss_pred HHHHHHHHHHhhhcccceeccCc--cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC---CC
Q 015609 139 IFDIMEKEKQRQFKGIELIASEN--FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD---LD 213 (403)
Q Consensus 139 i~~li~~e~~rq~~~l~LiaSen--~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg---~~ 213 (403)
+..++.++++.....++|-.++. +.++.+.+++.... ... .|+.. .|.. ++.+...+.+.+.+| .+
T Consensus 9 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~-~~~--~Y~~~---~G~~---~lr~~ia~~~~~~~~~~~~~ 79 (357)
T TIGR03539 9 LAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAA-DAP--GYPQT---WGTP---ELREAIVDWLERRRGVPGLD 79 (357)
T ss_pred HHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHH-hhC--CCCcc---cCCH---HHHHHHHHHHHHhcCCCCCC
Confidence 34444554433344466665433 34677888876543 211 22211 1221 222222333444444 44
Q ss_pred CCCCcceEEeCC-hHHHHHHHHhhh-ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHH
Q 015609 214 SDNWGVNVQPYS-CTSANFAVYTGL-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYE 291 (403)
Q Consensus 214 ~~~~~v~V~~~S-GT~An~aal~al-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d 291 (403)
++ +|+.++ +++++..++..+ +++||.|++..+.|.+.. ..+...|. +++.++ |++
T Consensus 80 ~~----~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~---------~~~~~~g~--~~~~v~--------~~~ 136 (357)
T TIGR03539 80 PT----AVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYE---------VGALLAGA--TPVAAD--------DPT 136 (357)
T ss_pred cC----eEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHH---------HHHHhcCC--EEeccC--------Chh
Confidence 43 466665 467888887777 799999999987765432 11233332 334332 223
Q ss_pred HHHHHhccCCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCCC-------c-ccEE
Q 015609 292 KLEEKAMDYRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-------Y-CDIV 358 (403)
Q Consensus 292 ~Le~~i~~~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-------~-aDiv 358 (403)
++ ...++++|++...++ |...+ +++|.++|+++|+++++|.++.. +...+.....+. . --++
T Consensus 137 ~l----~~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~~vi~ 211 (357)
T TIGR03539 137 EL----DPVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLE-LGWEGRPVSILDPRVCGGDHTGLLA 211 (357)
T ss_pred hc----CccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhh-hccCCCCccceecccCCCccccEEE
Confidence 22 224678887764444 55554 66788899999999999999752 221111001110 1 1377
Q ss_pred EEcCcCCC--cCCceEEEEEeCC
Q 015609 359 TSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 359 t~StHKtL--~GP~GG~I~~~~~ 379 (403)
+.|+.|.+ .|.++|+++.++.
T Consensus 212 ~~S~SK~~~~~G~R~G~~i~~~~ 234 (357)
T TIGR03539 212 VHSLSKRSNLAGYRAGFVAGDPA 234 (357)
T ss_pred EeccccccCCCceeEEEEecCHH
Confidence 88999985 5667899987643
No 259
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=98.83 E-value=6.2e-08 Score=99.89 Aligned_cols=143 Identities=17% Similarity=0.154 Sum_probs=97.0
Q ss_pred eEEeC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhc
Q 015609 220 NVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAM 298 (403)
Q Consensus 220 ~V~~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~ 298 (403)
+|+.+ ++++|+..++.++++|||+|++..+.|.+... .+...| .+++.++++. . .+|+++|+++++
T Consensus 143 ~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~---------~~~~~g--~~~~~v~~~~-~-g~~~~~l~~~~~ 209 (431)
T PRK15481 143 EIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSIN---------MLRYAG--FSASPVSVDA-E-GMQPEKLERALA 209 (431)
T ss_pred eEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH---------HHHHcC--CeEEeeccCC-C-CCCHHHHHHHHh
Confidence 35555 55789999999999999999999887655431 223344 4566666653 3 389999999886
Q ss_pred cCCCcEEEEe-CCCC--CccccHH---HHHHHHHHc-CCEEEEeccccccccccccccCCCC--c-ccEEEEcCcCCCcC
Q 015609 299 DYRPKILICG-GSSY--PREWDYG---RFRQIADKC-GAVLMCDMAHISGLIAAKELASPFD--Y-CDIVTSTTHKSLRG 368 (403)
Q Consensus 299 ~~~pklViv~-~s~~--g~~~Di~---~I~~Iake~-Ga~LivDaAh~~Glia~g~~~~p~~--~-aDivt~StHKtL~G 368 (403)
. ++|+|++. ..++ |..++.+ +|.++|+++ ++++++|.++.- +...+ ...++. . --+++.|+.|+++
T Consensus 210 ~-~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~-~~~~~-~~~~~~~~~~~vi~~~SfSK~~~- 285 (431)
T PRK15481 210 Q-GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFAL-LSSSP-YHSVIPQTTQRWALIRSVSKALG- 285 (431)
T ss_pred c-CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhh-hccCC-CCCCCcCCCCCEEEEeeeccccC-
Confidence 4 68887765 3444 5677765 888999999 999999998642 11111 111121 1 2377889999874
Q ss_pred C--ceEEEEEeCC
Q 015609 369 P--RGGIIFFRRG 379 (403)
Q Consensus 369 P--~GG~I~~~~~ 379 (403)
| +-|+++.+++
T Consensus 286 ~GlRiG~~i~~~~ 298 (431)
T PRK15481 286 PDLRLAFVASDSA 298 (431)
T ss_pred CCceeEEEeCCHH
Confidence 4 3398887653
No 260
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=98.83 E-value=9.8e-08 Score=95.95 Aligned_cols=190 Identities=19% Similarity=0.145 Sum_probs=109.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc---c-
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL---L- 239 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all---~- 239 (403)
+|.|.+++...+.. + +..+.+| ..+...++| +++++++|.+. .+.+.||++|+.+++..+. .
T Consensus 45 ~p~v~~a~~~~~~~-~--~~~~~~~--~~~~~~~l~----~~la~~~g~~~-----~~~~~sg~~a~~~a~~~~~~~~~~ 110 (379)
T TIGR00707 45 HPKLVEALKEQLEK-L--VHVSNLY--YTEPQEELA----EKLVEHSGADR-----VFFCNSGAEANEAALKLARKYTGD 110 (379)
T ss_pred CHHHHHHHHHHHhh-c--ccccccc--CCHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHhhc
Confidence 58888888876643 2 1122222 123344444 46889999874 3667789999999987652 2
Q ss_pred ---CCCeEEecCCCCCccccccccCCccchhhhcccc-eEEeeeecCCCC---CCCCHHHHHHHhccCCCcEEEEeCCCC
Q 015609 240 ---PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-FESFPYKVNPQT---GYIDYEKLEEKAMDYRPKILICGGSSY 312 (403)
Q Consensus 240 ---pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-~~vv~~~vd~~~---g~ID~d~Le~~i~~~~pklViv~~s~~ 312 (403)
+||+|++.+..+.|+.... ....+.. +......+..+. ...|++++++.+.+ ++++|++.+.+.
T Consensus 111 ~~~~~~~vi~~~~~yh~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~p~~~ 181 (379)
T TIGR00707 111 KGKEKKKIIAFENSFHGRTMGA--------LSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD-ETAAVIVEPIQG 181 (379)
T ss_pred cCCCCCeEEEECCCcCCccHHH--------HHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh-CeeEEEEEcccc
Confidence 3799999876654332110 0001100 000001111110 11389999998864 578888764432
Q ss_pred --Ccc-c---cHHHHHHHHHHcCCEEEEecccccccccccc-cc-CCCC-cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015609 313 --PRE-W---DYGRFRQIADKCGAVLMCDMAHISGLIAAKE-LA-SPFD-YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 313 --g~~-~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~-~~-~p~~-~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
|.. . ++++|.++|+++|+++++|.+|. |+...+. .. .... ..|+++ +.|++.+ .+.|+++.+++
T Consensus 182 ~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~~~~~~~~~~d~~t--~sK~~~~G~riG~~~~~~~ 255 (379)
T TIGR00707 182 EGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFFAYEHYGIEPDIIT--LAKGLGGGVPIGATLAKEE 255 (379)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhhHHhcCCCCCEEE--EcccccCCcccEEEEEcHH
Confidence 221 2 47899999999999999999996 4322221 11 0111 256664 5799863 24588887654
No 261
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=98.82 E-value=2.3e-07 Score=94.76 Aligned_cols=185 Identities=18% Similarity=0.143 Sum_probs=107.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-----
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL----- 238 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all----- 238 (403)
+|+|.+++...+.. +. ..+ +.+ ..+...+++ ++++++++.+. .++++||++||.+++..+.
T Consensus 55 ~p~v~~a~~~~~~~-~~--~~~-~~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~~ 120 (401)
T TIGR01885 55 HPKIVKALTEQAQK-LT--LSS-RAF-YNDVFGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGYK 120 (401)
T ss_pred CHHHHHHHHHHHHh-cc--ccc-ccc-CCHHHHHHH----HHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhhh
Confidence 78888888876643 32 111 211 233333444 35888888643 4667899999999998752
Q ss_pred ----cC-CCeEEecCCCCCccccccccCCccchhhhcccc-----e-----EEeeeecCCCCCCCCHHHHHHHhccCCC-
Q 015609 239 ----LP-GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-----F-----ESFPYKVNPQTGYIDYEKLEEKAMDYRP- 302 (403)
Q Consensus 239 ----~p-GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-----~-----~vv~~~vd~~~g~ID~d~Le~~i~~~~p- 302 (403)
.+ .++|++....|.|... ..+...+.. + .+..++ ..|+++|++++++..+
T Consensus 121 ~~~~~~~~~~i~~~~~~yhg~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~ 186 (401)
T TIGR01885 121 VKGIPENQAIIVSAKGNFHGRTL--------GAISMSTDPDSRTNFGPYVPGFKKIP------YNNLEALEEALEDHGPN 186 (401)
T ss_pred hcCCCCCCCEEEEECCCcCcccH--------HHHhCcCCcccccccCCCCCCceEeC------CCCHHHHHHHHHhcCCC
Confidence 12 3567777766543210 011221110 0 111121 2478999998865333
Q ss_pred -cEEEEeC--CCCCcccc----HHHHHHHHHHcCCEEEEecccccccccccccc-C-CCC-cccEEEEcCcCCCcCC--c
Q 015609 303 -KILICGG--SSYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKELA-S-PFD-YCDIVTSTTHKSLRGP--R 370 (403)
Q Consensus 303 -klViv~~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~-~-p~~-~aDivt~StHKtL~GP--~ 370 (403)
.+|++++ +..|...+ +++|+++|+++|+++++|.+| .|+...|... . ..+ ..|+++++ |.|.|. +
T Consensus 187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~-~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ 263 (401)
T TIGR01885 187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQ-TGLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYP 263 (401)
T ss_pred EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCccchhhHHhhcCCCCCEEEee--ccccCCCCC
Confidence 3555553 23454444 999999999999999999999 4643333211 1 111 26888765 998652 2
Q ss_pred eEEEEEeCC
Q 015609 371 GGIIFFRRG 379 (403)
Q Consensus 371 GG~I~~~~~ 379 (403)
-|+++.+++
T Consensus 264 ig~v~~~~~ 272 (401)
T TIGR01885 264 VSAVLADDD 272 (401)
T ss_pred cEEEEEcHH
Confidence 355666543
No 262
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.81 E-value=5.2e-08 Score=95.37 Aligned_cols=183 Identities=19% Similarity=0.217 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCcc---chhhhcc
Q 015609 195 IDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGG---KKVSAAS 271 (403)
Q Consensus 195 ~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~---~~v~~~g 271 (403)
.+.||+. .++.||++.+. |.+++.|||.|+..++.++|+|||+.|...-.-.-.+ +..+.-++ ..+.-.+
T Consensus 67 RdtLe~v----yA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTL-eevIG~rg~~~gSL~dfg 139 (416)
T COG4100 67 RDTLERV----YAQVFGAEAAL--VRPQIISGTHAIACALFGILRPGDELLYITGSPYDTL-EEVIGLRGEGQGSLKDFG 139 (416)
T ss_pred hhHHHHH----HHHHhccccce--eeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhH-HHHhccCCCCcccHHHhC
Confidence 3556654 67999999864 6677889999999999999999999875432100000 00000000 0111123
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC-CCC-----ccccHHHHHHHHHHc--CCEEEEecccccccc
Q 015609 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS-SYP-----REWDYGRFRQIADKC--GAVLMCDMAHISGLI 343 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s-~~g-----~~~Di~~I~~Iake~--Ga~LivDaAh~~Gli 343 (403)
..++.+++. . .|.||++.++..+.+ ++|+|.+--| -|. .+.+++++.++.|+. +++++||.+-.- .
T Consensus 140 i~Y~~v~Lt--~-~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGE--F 213 (416)
T COG4100 140 IKYKAVPLT--A-DGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGE--F 213 (416)
T ss_pred cceeecccc--c-CCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchh--h
Confidence 344444443 2 589999999999984 6899876543 332 345777888888876 689999997321 1
Q ss_pred ccccccCCCC-cccEEEEcCcCCCcCC---ceEEEEEeCCC---CCcccCCCcccC
Q 015609 344 AAKELASPFD-YCDIVTSTTHKSLRGP---RGGIIFFRRGK---KPRKQGIPLNHG 392 (403)
Q Consensus 344 a~g~~~~p~~-~aDivt~StHKtL~GP---~GG~I~~~~~~---~~~~~~~p~~qG 392 (403)
.. ...|.. .+|++.+|.-|.-+|- .||.|..+.+. .--++..||...
T Consensus 214 vE--~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPGIG~ 267 (416)
T COG4100 214 VE--EKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPGIGR 267 (416)
T ss_pred hh--ccCccccchhhhccceeeCCCCceeeccceeechHHHHHhhceeeecCCccc
Confidence 11 113433 5999999999986553 36888877641 122345566544
No 263
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=98.80 E-value=2.1e-07 Score=94.29 Aligned_cols=199 Identities=11% Similarity=0.025 Sum_probs=121.6
Q ss_pred ccceeccCcc--CcHHHHHHHHHHhhhcC-CCCCCCCccccchHHHHHHHHHHHHHHHHHcC--------CCCCCCcceE
Q 015609 153 GIELIASENF--VCRAVMEALGSHLTNKY-SEGYPGARYYTGNQYIDQIENLCFERALKAFD--------LDSDNWGVNV 221 (403)
Q Consensus 153 ~l~LiaSen~--~~p~V~eA~~s~l~~~y-~eG~pgsr~~~G~~~~~~lE~~arerla~lfg--------~~~~~~~v~V 221 (403)
-+.|-.+++. +++.+++++...+.... ..+||. .|.. + .|+.++++++ ++++ +|
T Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~G~~---~----Lr~aia~~~~~~~~~~~~v~~~----~I 94 (374)
T PRK02610 30 LDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPD----GGHE---A----LKQAIAEYVNESAAGSSQITPA----NI 94 (374)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCC----CchH---H----HHHHHHHHhCccccccCCCCHH----HE
Confidence 3556556665 57889999876554321 112221 1221 1 3455667776 4543 46
Q ss_pred EeCCh-HHHHHHHHhhhccCCC-eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhcc
Q 015609 222 QPYSC-TSANFAVYTGLLLPGD-RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMD 299 (403)
Q Consensus 222 ~~~SG-T~An~aal~all~pGD-~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~ 299 (403)
+.++| ++|+..++.+++.+|| +|++..+.+.+.. ..+...| .+++.++.++++..+|+++|+++++.
T Consensus 95 ~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~---------~~~~~~g--~~~~~~~~~~~~~~~d~~~l~~~~~~ 163 (374)
T PRK02610 95 SVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYG---------ILAQTLG--IPVVRVGRDPETFEIDLAAAQSAIEQ 163 (374)
T ss_pred EEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHH---------HHHHHcC--CEEEEecCCcccCCCCHHHHHHHHHh
Confidence 66665 5688777788888886 8999887664432 1223344 45566666544567999999998865
Q ss_pred ---CCCcEEEEeCCCC--CccccHHHHHHHHHH-cCCEEEEeccccccccccccccCCCC-cc-cEEEEcCcCCC--cCC
Q 015609 300 ---YRPKILICGGSSY--PREWDYGRFRQIADK-CGAVLMCDMAHISGLIAAKELASPFD-YC-DIVTSTTHKSL--RGP 369 (403)
Q Consensus 300 ---~~pklViv~~s~~--g~~~Di~~I~~Iake-~Ga~LivDaAh~~Glia~g~~~~p~~-~a-Divt~StHKtL--~GP 369 (403)
.++|+|++..+++ |...+.+++.++++- +++++++|.+..- +...... ..+. +- -+++.|+.|++ .|-
T Consensus 164 ~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~-~~~~~~~-~~~~~~~~~ivi~SfSK~~g~~Gl 241 (374)
T PRK02610 164 TQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFE-FSQTTLV-GELAQHPNWVILRTFSKAFRLAAH 241 (374)
T ss_pred hcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccc-cCccchH-HHHhcCCCEEEEEecchhccCccc
Confidence 5789887765554 567777666666532 4899999998642 1110000 1111 11 26778999987 455
Q ss_pred ceEEEEEeCC
Q 015609 370 RGGIIFFRRG 379 (403)
Q Consensus 370 ~GG~I~~~~~ 379 (403)
|-|+++.+++
T Consensus 242 RiG~~v~~~~ 251 (374)
T PRK02610 242 RVGYAIGHPE 251 (374)
T ss_pred ceeeeecCHH
Confidence 6699997653
No 264
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=98.79 E-value=2.5e-07 Score=94.12 Aligned_cols=186 Identities=20% Similarity=0.135 Sum_probs=104.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCC-CCCcceEEeCChHHHHHHHHhhhccCC-
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDS-DNWGVNVQPYSCTSANFAVYTGLLLPG- 241 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~-~~~~v~V~~~SGT~An~aal~all~pG- 241 (403)
+|.+.+++...+.. + +....+| . .....++ .++++++++.+. + ..+++.||++|+.+++..+..+|
T Consensus 61 ~p~v~~ai~~~~~~-~--~~~~~~~-~-~~~~~~l----a~~l~~~~~~~~~~---~v~~~~sgsea~~~al~~~~~~g~ 128 (398)
T PRK03244 61 HPAVVEAVTRQLAT-L--GHVSNLF-A-TEPQIAL----AERLVELLGAPEGG---RVFFCNSGAEANEAAFKLARLTGR 128 (398)
T ss_pred CHHHHHHHHHHHHh-c--cCccCcc-C-CHHHHHH----HHHHHHhCCCCCCC---EEEEeCchHHHHHHHHHHHHHHCC
Confidence 57888887766543 2 1112222 1 2222233 345778888542 2 23455689999999998776676
Q ss_pred CeEEecCCCCCccccccccCCccchhhhcccc-----e-----EEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC
Q 015609 242 DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-----F-----ESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS 311 (403)
Q Consensus 242 D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-----~-----~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~ 311 (403)
++|+.....|.|... + .....+.. + .+..++ ..|++++++++. .++++|++++..
T Consensus 129 ~~ii~~~~~yhg~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~~~-~~~~aviiep~~ 193 (398)
T PRK03244 129 TKIVAAEGGFHGRTM-G-------ALALTGQPAKRAPFEPLPGGVEHVP------YGDVDALAAAVD-DDTAAVFLEPIQ 193 (398)
T ss_pred CeEEEECCCcCCccH-H-------HHhccCCcccccCCCCCCCCceEeC------CCCHHHHHHhhc-CCeEEEEEeccc
Confidence 456666544433310 0 01111110 0 111111 248899998885 367888876542
Q ss_pred --CCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc-cCC-CC-cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015609 312 --YPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL-ASP-FD-YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 312 --~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~-~~p-~~-~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
.|...+ +++|.++|+++|+++++|.+|. |+-..+.. ... .. ..|++++ .|+|.+ -+-|+++.+++
T Consensus 194 ~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~t~--sK~l~~G~~ig~~~~~~~ 268 (398)
T PRK03244 194 GEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVVTL--AKGLGGGLPIGACLAFGP 268 (398)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEEEE--chhhhCCcccEEEEEcHH
Confidence 355555 8999999999999999999986 43222211 001 11 2677765 599864 12355555543
No 265
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=98.78 E-value=1.4e-07 Score=94.24 Aligned_cols=193 Identities=17% Similarity=0.108 Sum_probs=119.5
Q ss_pred ccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCh-HHH
Q 015609 153 GIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSC-TSA 229 (403)
Q Consensus 153 ~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SG-T~A 229 (403)
-+.|--++|. .++.+++++...+......+||. .|. . ..|+.++++++++++ +|++++| +++
T Consensus 20 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~g~------~-~lr~~ia~~~~~~~~----~I~~t~G~~~~ 84 (337)
T PRK03967 20 RIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPH----ITS------D-PLREAIAEFYGLDAE----NIAVGNGSDEL 84 (337)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCC----CCH------H-HHHHHHHHHhCcCcc----eEEEcCCHHHH
Confidence 3555544544 46888888876653211112221 122 1 246678899998875 5666655 567
Q ss_pred HHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC
Q 015609 230 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 230 n~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
+..++..+ +||+|++....|.... ......| .++++++.+. .+.+|++.+++.+. +++++++..
T Consensus 85 l~~~~~~~--~gd~V~v~~P~y~~~~---------~~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~~~--~~~~v~~~~ 148 (337)
T PRK03967 85 ISYLVKLF--EGKHIVITPPTFGMYS---------FYAKLNG--IPVIDVPLKE-DFTIDGERIAEKAK--NASAVFICS 148 (337)
T ss_pred HHHHHHHh--CCCeEEEeCCChHHHH---------HHHHHcC--CeEEEeecCC-CCCcCHHHHHHhcc--CCCEEEEeC
Confidence 77766654 7999999987764321 1123333 4556666653 46799999988653 467776654
Q ss_pred CC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cc-cEEEEcCcCCC--cCCceEEEEEeCC
Q 015609 310 SS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YC-DIVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 310 s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~a-Divt~StHKtL--~GP~GG~I~~~~~ 379 (403)
.+ +|...+.++|.++|+ +++++++|.++.- +.... ....++ .- =+++.|+.|++ .|-|.|+++.++.
T Consensus 149 P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~-~~~~~-~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~ 221 (337)
T PRK03967 149 PNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAE-FSGKS-LIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEE 221 (337)
T ss_pred CCCCCCCCCCHHHHHHHHh-cCCEEEEECchhh-hcccc-hHHHHhhCCCEEEEecchHhhcchhhhheeeecCHH
Confidence 44 467889999999995 6999999999752 21110 000011 11 26678999997 3556699998653
No 266
>PRK07908 hypothetical protein; Provisional
Probab=98.76 E-value=4.3e-07 Score=90.87 Aligned_cols=191 Identities=14% Similarity=0.096 Sum_probs=114.5
Q ss_pred hhcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC-h
Q 015609 150 QFKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYS-C 226 (403)
Q Consensus 150 q~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~S-G 226 (403)
..+.+.|..++|. .++.|++++...+... .+|+.. .| .+ ..|+.++++++++++ +|++++ +
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~---~g------~~-~lr~aia~~~~~~~~----~I~it~Ga 84 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARLGDL--AAYPST---ED------ER-RARAAVAARHGRTPD----EVLLLAGA 84 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhHh--hcCCCc---cc------hH-HHHHHHHHHhCcChh----hEEECCCH
Confidence 3456777666664 5788899988665332 122221 12 11 246778889998875 466665 5
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEE
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILI 306 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklVi 306 (403)
++|+..++. +++|+ |++....+.... ..+...| .+++.++++. .+.+|++.++ .++++++
T Consensus 85 ~~al~~~~~--l~~~~-viv~~P~y~~~~---------~~~~~~G--~~i~~v~~~~-~~~~d~~~l~-----~~~~~i~ 144 (349)
T PRK07908 85 AEGFALLAR--LRPRR-AAVVHPSFTEPE---------AALRAAG--IPVHRVVLDP-PFRLDPAAVP-----DDADLVV 144 (349)
T ss_pred HHHHHHHHh--cCCCe-EEEeCCCChHHH---------HHHHHcC--CEEEeeccCc-ccCcChhHhc-----cCCCEEE
Confidence 678887776 57765 444443332211 1223334 4566666654 3568887542 3578877
Q ss_pred EeCCC--CCccccHHHHHHHHHHcCCEEEEeccccccccccccccC--CCCccc-EEEEcCcCCC--cCCceEEEEEeCC
Q 015609 307 CGGSS--YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFDYCD-IVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 307 v~~s~--~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~~aD-ivt~StHKtL--~GP~GG~I~~~~~ 379 (403)
+...+ +|...+.++|.++|++ +.++++|.++.- ++. +..+. ..+..+ +++.|++|++ .|.|-|+++.++.
T Consensus 145 l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~-~~~-~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~ 221 (349)
T PRK07908 145 IGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFAD-AVP-GEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPD 221 (349)
T ss_pred EcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchh-hcc-CCccccccccCCCEEEEeecccccCCccceeeeeecCHH
Confidence 75444 4678899999999975 889999999753 121 11111 112224 4556999976 4666799997653
No 267
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=98.76 E-value=2.5e-07 Score=95.05 Aligned_cols=148 Identities=16% Similarity=0.098 Sum_probs=86.0
Q ss_pred eEEeCChHHHHHHHHhhhcc------CC-CeEEecCCCCCccccccccCCccchhhhcccc-eEEeeeecCC---CCCCC
Q 015609 220 NVQPYSCTSANFAVYTGLLL------PG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-FESFPYKVNP---QTGYI 288 (403)
Q Consensus 220 ~V~~~SGT~An~aal~all~------pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-~~vv~~~vd~---~~g~I 288 (403)
.++++||++||.+++..+.. +| .+|++....+.|.. . -.++..+.. +...+.+..+ .....
T Consensus 96 v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t-----~---~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 167 (395)
T PRK03715 96 VFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRT-----L---ATMSASGKPGWDTIFAPQVPGFPKAELN 167 (395)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCCh-----H---HHHhhcCCcccccCCCCCCCCceeeCCc
Confidence 46677999999999987641 23 56777665442321 1 012222211 1100000000 01135
Q ss_pred CHHHHHHHhccCCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEE
Q 015609 289 DYEKLEEKAMDYRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVT 359 (403)
Q Consensus 289 D~d~Le~~i~~~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt 359 (403)
|++++++++.+ ++++|++++. ..|...+ +++|+++|+++|+++++|.+|. |+-..|.. ..-++ ..|+++
T Consensus 168 d~~~l~~~l~~-~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~GRtG~~~a~~~~gv~PDi~t 245 (395)
T PRK03715 168 DIASVEKLITD-KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELSGIEPDIMT 245 (395)
T ss_pred hHHHHHHHcCC-CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCcchhhHhhcCCCCceee
Confidence 78999988863 5677777743 2344445 9999999999999999999998 54223321 11122 268876
Q ss_pred EcCcCCCcC-CceEEEEEeCC
Q 015609 360 STTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 360 ~StHKtL~G-P~GG~I~~~~~ 379 (403)
++ |.|.| -+.|+++++++
T Consensus 246 ~g--K~lg~G~p~~av~~~~~ 264 (395)
T PRK03715 246 LG--KGIGGGVPLAALLAKAE 264 (395)
T ss_pred eh--hhhhCCcceEEEEEccc
Confidence 64 99976 12455566654
No 268
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=98.74 E-value=5.9e-07 Score=93.76 Aligned_cols=148 Identities=16% Similarity=0.097 Sum_probs=96.2
Q ss_pred eEEeCC-hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHHHHHHHh
Q 015609 220 NVQPYS-CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYEKLEEKA 297 (403)
Q Consensus 220 ~V~~~S-GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d~Le~~i 297 (403)
+|+.++ +++|+.+++.+++.|||.|++..+.|++... .+... .+.+++++..+.++ ..+|++++++++
T Consensus 122 ~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~---------~~~~~-~g~~vv~v~~~~~~~f~~~~~~le~a~ 191 (447)
T PLN02607 122 RIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDR---------DLRWR-TGVKIVPIHCDSSNNFQVTPQALEAAY 191 (447)
T ss_pred HeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHhc-CCcEEEEEeCCCCCCCcCCHHHHHHHH
Confidence 455555 5778999999999999999999888766531 12211 12456666665433 358999999988
Q ss_pred cc-----CCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCC------CC--c-cc--
Q 015609 298 MD-----YRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASP------FD--Y-CD-- 356 (403)
Q Consensus 298 ~~-----~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p------~~--~-aD-- 356 (403)
++ .++|+|++..+++ |.+.+ +++|.++|+++++.+|+|.+.+.-......+.+. .+ . -+
T Consensus 192 ~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v 271 (447)
T PLN02607 192 QEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERV 271 (447)
T ss_pred HHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcE
Confidence 64 3577776654444 55655 6788889999999999999865432211111110 00 0 11
Q ss_pred EEEEcCcCCC--cCCceEEEEEe
Q 015609 357 IVTSTTHKSL--RGPRGGIIFFR 377 (403)
Q Consensus 357 ivt~StHKtL--~GP~GG~I~~~ 377 (403)
+++.|+.|.| .|-|-|++++.
T Consensus 272 ~vi~s~SK~fg~~GlRvG~ivs~ 294 (447)
T PLN02607 272 HIVYSLSKDLGLPGFRVGTIYSY 294 (447)
T ss_pred EEEEcchhcCCCCcceEEEEEEc
Confidence 4567999987 45566999874
No 269
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=98.74 E-value=7.4e-07 Score=91.12 Aligned_cols=199 Identities=15% Similarity=0.118 Sum_probs=112.7
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccc--cchHHHHHHHHHHHHHHHHHc---CCCCCCCcceEEeC
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYY--TGNQYIDQIENLCFERALKAF---DLDSDNWGVNVQPY 224 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~--~G~~~~~~lE~~arerla~lf---g~~~~~~~v~V~~~ 224 (403)
+.+.|-.+++. +++.|.+++...+.+.... .....|. .|.+. .|+.+++++ +++++ +|+++
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~Y~p~~g~~~-------lr~aia~~~~~~~~~~d----~I~it 101 (402)
T TIGR03542 34 DIIRLGIGDTTQPLPASVIEAFHNAVDELASE-ETFRGYGPEQGYPF-------LREAIAENDYRGRIDPE----EIFIS 101 (402)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhccccc-ccccCCCCCCCCHH-------HHHHHHHHHHhcCCCHH----HEEEC
Confidence 44666655554 5788899988776542110 0011121 23321 234455544 56664 56677
Q ss_pred ChH-HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhccc---------ceEEeeeecCCCC-CCCCHHHH
Q 015609 225 SCT-SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI---------FFESFPYKVNPQT-GYIDYEKL 293 (403)
Q Consensus 225 SGT-~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~---------~~~vv~~~vd~~~-g~ID~d~L 293 (403)
+|+ +|+.. +..++.+||+|++..+.+.+... .....|. +-++++++.++++ ...|+++
T Consensus 102 ~Ga~~al~~-l~~l~~~gd~Vlv~~P~y~~~~~---------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~- 170 (402)
T TIGR03542 102 DGAKCDVFR-LQSLFGSDNTVAVQDPVYPAYVD---------SNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE- 170 (402)
T ss_pred CCcHHHHHH-HHHhcCCCCEEEEeCCCCcchHH---------HHHHcCCccccccccccceEEEeecchhhCCCCCccc-
Confidence 665 56655 45677899999998887654431 1222332 0145555554322 2233221
Q ss_pred HHHhccCCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC---Cc---ccEEEEcC
Q 015609 294 EEKAMDYRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---DY---CDIVTSTT 362 (403)
Q Consensus 294 e~~i~~~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~~---aDivt~St 362 (403)
..++++|++...++ |...+ +++|.++|+++++++++|.++.- +...+..+.++ +. .-+++.|+
T Consensus 171 -----~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~-~~~~~~~~~~~~~~~~~~~~vi~~~Sf 244 (402)
T TIGR03542 171 -----EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSA-FISDPSLPHSIFEIPGAKECAIEFRSF 244 (402)
T ss_pred -----cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhh-hccCCCCCcchhhCCCCcccEEEEecC
Confidence 13578887765454 55555 78888999999999999999763 22211111121 11 12557899
Q ss_pred cCCC--cCCceEEEEEeCC
Q 015609 363 HKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 363 HKtL--~GP~GG~I~~~~~ 379 (403)
.|.+ .|-|-|++++++.
T Consensus 245 SK~~g~pGlRiG~~i~~~~ 263 (402)
T TIGR03542 245 SKTAGFTGVRLGWTVVPKE 263 (402)
T ss_pred ccccCCCCcceEEEEecHH
Confidence 9987 3445599988654
No 270
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=98.72 E-value=6.8e-07 Score=90.00 Aligned_cols=195 Identities=19% Similarity=0.155 Sum_probs=120.2
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCC--CcceEEeC-ChHHHHHHHHhhhcc
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDN--WGVNVQPY-SCTSANFAVYTGLLL 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~--~~v~V~~~-SGT~An~aal~all~ 239 (403)
+++.+.+|+...+...-..|| +... |- . .||+.++++++-+... -.-.|+.+ ++++|+..++.+|.+
T Consensus 79 ts~~a~~Av~~al~Sgk~N~Y--aps~-G~------~-~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~ 148 (447)
T KOG0259|consen 79 TSQEAEQAVVDALRSGKGNGY--APSV-GI------L-PARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLAN 148 (447)
T ss_pred CCHHHHHHHHHHHhcCCCCCc--CCcc-cc------H-HHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcC
Confidence 477888887776655432333 1111 21 1 2677777875432110 00124444 578999999999999
Q ss_pred CCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHHHHHHHhccCCCcEEEEeCCC-CCc---
Q 015609 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYEKLEEKAMDYRPKILICGGSS-YPR--- 314 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d~Le~~i~~~~pklViv~~s~-~g~--- 314 (403)
||..|+++...+. |.. .......+++.+|++-|+. ..||++.+|.++.++...+||.+++| .|.
T Consensus 149 p~aNILlPrPGfp----~Y~-------~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys 217 (447)
T KOG0259|consen 149 PGANILLPRPGFP----LYD-------TRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYS 217 (447)
T ss_pred CCCceecCCCCCc----hHH-------HhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCccccc
Confidence 9999999875421 111 1112234677888776554 47999999999998644556665543 343
Q ss_pred cccHHHHHHHHHHcCCEEEEeccccccccc-cccccCCCC----cccEEE-EcCcCCC--cCCceEEEEEeCCC
Q 015609 315 EWDYGRFRQIADKCGAVLMCDMAHISGLIA-AKELASPFD----YCDIVT-STTHKSL--RGPRGGIIFFRRGK 380 (403)
Q Consensus 315 ~~Di~~I~~Iake~Ga~LivDaAh~~Glia-~g~~~~p~~----~aDivt-~StHKtL--~GP~GG~I~~~~~~ 380 (403)
...+++|+++|+++|+.++.|..- |... .+.-..|+. .+=+++ ++..|-. +|-|-|+|+..+..
T Consensus 218 ~~HL~kiae~A~klgi~vIaDEVY--~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~ 289 (447)
T KOG0259|consen 218 EDHLKKIAETAKKLGIMVIADEVY--GHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPR 289 (447)
T ss_pred HHHHHHHHHHHHHhCCeEEehhhc--ceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEeccc
Confidence 346899999999999999999962 2222 221112222 133454 4667764 55566999998753
No 271
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=98.72 E-value=4.5e-07 Score=92.88 Aligned_cols=184 Identities=19% Similarity=0.134 Sum_probs=106.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-----
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL----- 238 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all----- 238 (403)
+|.|.+++...+.+.+.. +..+ .++...+++ ++++++++.+. ..+++||++||.++++.+.
T Consensus 53 ~p~v~~a~~~~~~~~~~~---~~~~--~~~~~~~la----~~L~~~~~~~~-----~~f~~SGseA~e~Alk~ar~~~~~ 118 (397)
T TIGR03246 53 HPELVKALIEQADKLWHI---GNGY--TNEPVLRLA----KKLVDATFADK-----VFFCNSGAEANEAALKLARRYALD 118 (397)
T ss_pred CHHHHHHHHHHHHhcccc---cCcc--CCHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHHh
Confidence 788888887766542211 1111 123333333 45778887653 3667899999999998652
Q ss_pred ---cCCCeEEecCCCCCccccccccCCccchhhhcccc-----e-----EEeeeecCCCCCCCCHHHHHHHhccCCCcEE
Q 015609 239 ---LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-----F-----ESFPYKVNPQTGYIDYEKLEEKAMDYRPKIL 305 (403)
Q Consensus 239 ---~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-----~-----~vv~~~vd~~~g~ID~d~Le~~i~~~~pklV 305 (403)
...++|+..+..+.|... + .++..+.. + .+..++ ..|++++++++.+ ++++|
T Consensus 119 ~~~~~r~~ii~~~~~yHG~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~aav 183 (397)
T TIGR03246 119 KHGADKSEIVAFKNSFHGRTL-F-------TVSVGGQPKYSQGFAPLPGGIKHAP------YNDLAAAKALISD-KTCAV 183 (397)
T ss_pred cCCCCCCEEEEECCCcCCccH-H-------HHHhcCCcccccCCCCCCCceEEeC------CCCHHHHHHHhcc-CeEEE
Confidence 123567776654433210 0 11211110 0 111111 2489999998864 57788
Q ss_pred EEeCCC--CCc----cccHHHHHHHHHHcCCEEEEecccccccccccccc--CCCC-cccEEEEcCcCCCc-CCceEEEE
Q 015609 306 ICGGSS--YPR----EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPFD-YCDIVTSTTHKSLR-GPRGGIIF 375 (403)
Q Consensus 306 iv~~s~--~g~----~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~~-~aDivt~StHKtL~-GP~GG~I~ 375 (403)
++++.. .|. ...+++|+++|+++|+++|+|.+| .|+...|... ..++ ..|+++ +-|.|. |-+-|+++
T Consensus 184 i~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv~pDi~t--~~K~lggG~pigav~ 260 (397)
T TIGR03246 184 IVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDILT--SAKALGGGFPIGAML 260 (397)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchhhhhcCCCCCEEE--eehhhhCCcceeEEE
Confidence 887432 232 234899999999999999999999 6653333211 1112 268774 579884 43346666
Q ss_pred EeCC
Q 015609 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
.+++
T Consensus 261 ~~~~ 264 (397)
T TIGR03246 261 TTTE 264 (397)
T ss_pred EcHH
Confidence 6654
No 272
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=98.71 E-value=4.2e-07 Score=96.57 Aligned_cols=147 Identities=19% Similarity=0.147 Sum_probs=96.4
Q ss_pred eEEeC-ChHHHHHHHHhh-----hccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC------CC
Q 015609 220 NVQPY-SCTSANFAVYTG-----LLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT------GY 287 (403)
Q Consensus 220 ~V~~~-SGT~An~aal~a-----ll~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~------g~ 287 (403)
+|+.+ ++++|+..++.+ +++|||+|++..+.+..... .+.+.+.++++++++.++++ ..
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~---------~~~l~~~g~~vv~i~~~~~~~~g~~~~~ 227 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLE---------IPELPRYDFEVVRIKADEMTEDGTHTWQ 227 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHH---------HHHHhcCCcEEEEeecccccccccccCC
Confidence 45544 577888888776 68999999999876544321 12334334566666654322 56
Q ss_pred CCHHHHHHHhccCCCcEEEEeCCCC--Ccccc---HHHHHHHHHHc--CCEEEEeccccccccccccccCCCC---cccE
Q 015609 288 IDYEKLEEKAMDYRPKILICGGSSY--PREWD---YGRFRQIADKC--GAVLMCDMAHISGLIAAKELASPFD---YCDI 357 (403)
Q Consensus 288 ID~d~Le~~i~~~~pklViv~~s~~--g~~~D---i~~I~~Iake~--Ga~LivDaAh~~Glia~g~~~~p~~---~aDi 357 (403)
+|.+++++++. .++|+|++..+++ |...+ +++|.++|+++ ++++|+|.+..- +.. ...+.+. .--+
T Consensus 228 ~d~~~l~~~~~-~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~-f~~--~~~sl~~~~~~~vI 303 (521)
T TIGR03801 228 YPDKELEKLRD-PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGT-FVD--DFRSLFAELPYNTI 303 (521)
T ss_pred CCHHHHHHhcC-CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchh-hcc--cccchhhhCCCCEE
Confidence 89999998765 4788887655554 45555 77778889886 999999998652 221 1111111 1227
Q ss_pred EEEcCcCCC--cCCceEEEEEeCC
Q 015609 358 VTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 358 vt~StHKtL--~GP~GG~I~~~~~ 379 (403)
++.|+.|++ .|-|-|+++..+.
T Consensus 304 ~v~SfSK~fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 304 GVYSFSKYFGATGWRLGTIALHKD 327 (521)
T ss_pred EEEcchhhccCchhhhhhhhcCch
Confidence 788999986 4555599988654
No 273
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=98.71 E-value=5.8e-07 Score=90.41 Aligned_cols=192 Identities=16% Similarity=0.119 Sum_probs=115.3
Q ss_pred cceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCh-HHHH
Q 015609 154 IELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSC-TSAN 230 (403)
Q Consensus 154 l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SG-T~An 230 (403)
+.|-.+++. .++.+++++...+... ..||.. + .. ..|+.++++++++++ +|++++| ++++
T Consensus 22 ~~l~~~~~~~~~p~~~~~a~~~~~~~~--~~Y~~~----~------~~-~lr~~ia~~~~~~~~----~i~it~Ga~~~l 84 (354)
T PRK06358 22 LDFSANINPLGVPESLKQAITENLDKL--VEYPDP----D------YL-ELRKRIASFEQLDLE----NVILGNGATELI 84 (354)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhh--hcCCCc----c------HH-HHHHHHHHHhCCChh----hEEECCCHHHHH
Confidence 566655555 3788888888754321 122211 1 12 246778899999875 5666654 5688
Q ss_pred HHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccCCCcEEEEeC
Q 015609 231 FAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDYRPKILICGG 309 (403)
Q Consensus 231 ~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~~pklViv~~ 309 (403)
..++.++ .+ ++|++....++... ......| .+++.++.+.+ +..+| +++.+.+.. ++++|++..
T Consensus 85 ~~~~~~~-~~-~~v~i~~P~y~~~~---------~~~~~~g--~~~~~~~~~~~~~~~~d-~~~~~~~~~-~~~~v~~~~ 149 (354)
T PRK06358 85 FNIVKVT-KP-KKVLILAPTFAEYE---------RALKAFD--AEIEYAELTEETNFAAN-EIVLEEIKE-EIDLVFLCN 149 (354)
T ss_pred HHHHHHh-CC-CcEEEecCChHHHH---------HHHHHcC--CeeEEEeCccccCCCcc-HHHHHhhcc-CCCEEEEeC
Confidence 8887775 44 67888776654332 1122334 34555555533 23688 666566643 588876654
Q ss_pred CCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC---Cccc--EEEEcCcCCC--cCCceEEEEEe
Q 015609 310 SSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---DYCD--IVTSTTHKSL--RGPRGGIIFFR 377 (403)
Q Consensus 310 s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~~aD--ivt~StHKtL--~GP~GG~I~~~ 377 (403)
+++ |...+ +++|.++|+++++++++|.+.. .+...+.....+ +..+ +++.|+.|++ .|-|-|+++..
T Consensus 150 P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~ 228 (354)
T PRK06358 150 PNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFM-DFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTS 228 (354)
T ss_pred CCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCccc-ccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecC
Confidence 444 45554 7778888999999999999854 222221111111 1112 6678999986 35566999874
Q ss_pred C
Q 015609 378 R 378 (403)
Q Consensus 378 ~ 378 (403)
.
T Consensus 229 ~ 229 (354)
T PRK06358 229 N 229 (354)
T ss_pred C
Confidence 3
No 274
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=98.70 E-value=9.9e-07 Score=88.73 Aligned_cols=211 Identities=19% Similarity=0.130 Sum_probs=115.3
Q ss_pred CCCCChHHHHHHHHHH-HhhhcccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHH
Q 015609 132 LPLADPEIFDIMEKEK-QRQFKGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALK 208 (403)
Q Consensus 132 l~~~d~ei~~li~~e~-~rq~~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~ 208 (403)
++...+.++.-+.... ......+.|-.++.. .++.+++++...... . +|+. ..|.. ++.+...+.+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~--~Y~~---~~G~~---~lr~~ia~~l~~ 77 (364)
T PRK07865 7 LPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA-P--GYPT---TAGTP---ELREAIVGWLAR 77 (364)
T ss_pred CCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh-C--CCCC---ccCCH---HHHHHHHHHHHH
Confidence 4445554454443332 333445666544322 257778887654321 1 2211 12332 222222233444
Q ss_pred HcC---CCCCCCcceEEeCCh-HHHHHHHHhhh-ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC
Q 015609 209 AFD---LDSDNWGVNVQPYSC-TSANFAVYTGL-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP 283 (403)
Q Consensus 209 lfg---~~~~~~~v~V~~~SG-T~An~aal~al-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~ 283 (403)
.+| ++++ +|+.++| ++|+..++..+ +++||+|++..+.|.+... .+...|. +++.++
T Consensus 78 ~~~~~~~~~~----~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~---------~~~~~g~--~~~~~~--- 139 (364)
T PRK07865 78 RRGVTGLDPA----AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV---------GARLAGA--TVVRAD--- 139 (364)
T ss_pred HcCCCCCCcc----cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH---------HHHhcCC--EEEecC---
Confidence 444 4453 4666665 56777766777 6999999999877654321 1233332 344332
Q ss_pred CCCCCCHHHHHHHhccCCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC------
Q 015609 284 QTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF------ 352 (403)
Q Consensus 284 ~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~------ 352 (403)
++++++ ..++++|++...++ |..++ +++|.++|+++|+++++|.++.- +...+.....+
T Consensus 140 -----~~~~l~----~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~ 209 (364)
T PRK07865 140 -----SLTELG----PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLE-LGWDAEPVSILDPRVCG 209 (364)
T ss_pred -----ChhhCC----cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhh-hccCCCCCccccccccC
Confidence 223322 24678887764444 45555 56778889999999999999763 22111111111
Q ss_pred -C-cccEEEEcCcCCC--cCCceEEEEEeCC
Q 015609 353 -D-YCDIVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 353 -~-~aDivt~StHKtL--~GP~GG~I~~~~~ 379 (403)
. .--+++.|+.|.+ .|-+.|+++.+++
T Consensus 210 ~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~ 240 (364)
T PRK07865 210 GDHTGLLAVHSLSKQSNLAGYRAGFVAGDPA 240 (364)
T ss_pred CccceEEEEeechhccCCCceeeEEEecCHH
Confidence 1 1237889999986 4667799987653
No 275
>PLN02368 alanine transaminase
Probab=98.69 E-value=1.2e-06 Score=90.32 Aligned_cols=145 Identities=12% Similarity=0.069 Sum_probs=94.3
Q ss_pred eEEeCC-hHHHHHHHHhhhc-cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHH
Q 015609 220 NVQPYS-CTSANFAVYTGLL-LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEK 296 (403)
Q Consensus 220 ~V~~~S-GT~An~aal~all-~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~ 296 (403)
+|+.++ +++|+..++.+++ +|||+|++....+.... ..+...| .++++++++++ +..+|+++|++.
T Consensus 132 ~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~---------~~~~~~g--~~~v~v~~~~~~~~~~d~~~le~~ 200 (407)
T PLN02368 132 LIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS---------ATISLLG--GTLVPYYLEESENWGLDVNNLRQS 200 (407)
T ss_pred hEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH---------HHHHHcC--CEEEEEecccccCCCCCHHHHHHH
Confidence 465565 5669999999887 79999999988765432 1223344 35566666543 346999999998
Q ss_pred hccC-----CCcEEEEeCCC--CCcccc---HHHHHHHHHHcCCEEEEeccccccccccc--cccC------CC----C-
Q 015609 297 AMDY-----RPKILICGGSS--YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAK--ELAS------PF----D- 353 (403)
Q Consensus 297 i~~~-----~pklViv~~s~--~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g--~~~~------p~----~- 353 (403)
++.. ++|++++..++ +|.+.+ +++|.++|+++++++++|.+..- ++..+ ...+ .+ +
T Consensus 201 i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~-l~y~~~~~~~s~~~~~~~~~~~~~~ 279 (407)
T PLN02368 201 VAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQ-NIYQDERPFISAKKVLMDMGPPISK 279 (407)
T ss_pred HHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCcccHHHHHhhhcccccc
Confidence 8631 57866655444 355554 66777889999999999998543 22111 1111 01 0
Q ss_pred ccc-EEEEcCcCCC---cCCceEEEEE
Q 015609 354 YCD-IVTSTTHKSL---RGPRGGIIFF 376 (403)
Q Consensus 354 ~aD-ivt~StHKtL---~GP~GG~I~~ 376 (403)
+.. +++.|+.|++ .|-|.|+++.
T Consensus 280 ~~~vI~~~SfSK~~~~~~GlRiGy~i~ 306 (407)
T PLN02368 280 EVQLVSFHTVSKGYWGECGQRGGYFEM 306 (407)
T ss_pred cceEEEEecCCcccccCCccceEEEEE
Confidence 112 5578999986 4777799885
No 276
>PRK08354 putative aminotransferase; Provisional
Probab=98.68 E-value=7.2e-07 Score=88.10 Aligned_cols=178 Identities=19% Similarity=0.076 Sum_probs=107.2
Q ss_pred ccceeccCccC-cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC-hHHHH
Q 015609 153 GIELIASENFV-CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYS-CTSAN 230 (403)
Q Consensus 153 ~l~LiaSen~~-~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~S-GT~An 230 (403)
.|.|-.++|+. ++.+.+++...+.. . .+||. ... .++.+++.+|. +|+.++ +++|+
T Consensus 10 ~i~l~~~~np~~p~~~~~a~~~~~~~-~-~~yp~---------~~~----l~~~ia~~~~~-------~I~vt~G~~~al 67 (311)
T PRK08354 10 LIDFSASVNPYPPEWLDEMFERAKEI-S-GRYTY---------YEW----LEEEFSKLFGE-------PIVITAGITEAL 67 (311)
T ss_pred eeEecCCCCCCCCHHHHHHHHHHHHH-h-hcCCC---------hHH----HHHHHHHHHCC-------CEEECCCHHHHH
Confidence 45666666665 67778887655432 1 12331 112 24567888873 255555 56787
Q ss_pred HHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC
Q 015609 231 FAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310 (403)
Q Consensus 231 ~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s 310 (403)
..++. ++.+||+|++..+.|.++. ..+...|. +++.+ .+|++.++++++ +++++++..+
T Consensus 68 ~~~~~-~~~~gd~vlv~~P~y~~~~---------~~~~~~g~--~~~~~-------~~d~~~l~~~~~--~~~~vi~~~P 126 (311)
T PRK08354 68 YLIGI-LALRDRKVIIPRHTYGEYE---------RVARFFAA--RIIKG-------PNDPEKLEELVE--RNSVVFFCNP 126 (311)
T ss_pred HHHHH-hhCCCCeEEEeCCCcHHHH---------HHHHHcCC--EEeec-------CCCHHHHHHhhc--CCCEEEEecC
Confidence 77664 4458999999988765542 12233342 33332 368899988876 3566655544
Q ss_pred CC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCC--cCCceEEEEE
Q 015609 311 SY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL--RGPRGGIIFF 376 (403)
Q Consensus 311 ~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL--~GP~GG~I~~ 376 (403)
++ |...+ +++|.++|+++|+++++|.+..- +...+... + ..--+++.|+.|++ .|-|-|++++
T Consensus 127 ~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~-f~~~~~~~-~-~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 127 NNPDGKFYNFKELKPLLDAVEDRNALLILDEAFID-FVKKPESP-E-GENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred CCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchh-cccccccc-C-CCcEEEEeccHhhcCCccceeeeeee
Confidence 44 45554 56667778899999999998643 22211111 1 11236778999987 3556688887
No 277
>PRK09275 aspartate aminotransferase; Provisional
Probab=98.68 E-value=5.7e-07 Score=95.68 Aligned_cols=147 Identities=17% Similarity=0.148 Sum_probs=97.3
Q ss_pred eEEeC-ChHHHHHHHHhh-----hccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHH
Q 015609 220 NVQPY-SCTSANFAVYTG-----LLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEK 292 (403)
Q Consensus 220 ~V~~~-SGT~An~aal~a-----ll~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~ 292 (403)
+|+.+ ++++|+..++.+ +++|||+|++..+.+.... ..+.+.+..+++++++.+++ +..+|.++
T Consensus 163 ~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~---------~~~~l~g~~~~~v~v~~~~~~~f~~d~~~ 233 (527)
T PRK09275 163 DLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYL---------EIPELPRYDLEVVHINADEENEWQYPDSE 233 (527)
T ss_pred eEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHH---------HHHHHcCCCeEEEEeecCcccCCCCCHHH
Confidence 45555 567888888876 6899999999987664432 11234444456677766543 35799999
Q ss_pred HHHHhccCCCcEEEEeCCCC--Ccccc---HHHHHHHHHH--cCCEEEEeccccccccccccccCCC---CcccEEEEcC
Q 015609 293 LEEKAMDYRPKILICGGSSY--PREWD---YGRFRQIADK--CGAVLMCDMAHISGLIAAKELASPF---DYCDIVTSTT 362 (403)
Q Consensus 293 Le~~i~~~~pklViv~~s~~--g~~~D---i~~I~~Iake--~Ga~LivDaAh~~Glia~g~~~~p~---~~aDivt~St 362 (403)
|++++. .++|+|++..+++ |...+ +++|.++|++ +++++++|.+..- +.. . ..+.+ ..--+++.|+
T Consensus 234 l~~~~~-~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~-f~~-~-~~s~~~~~~~~~I~v~Sf 309 (527)
T PRK09275 234 LEKLRD-PSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGT-FVD-D-FRSLFAVLPYNTILVYSF 309 (527)
T ss_pred HHhhcC-CCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChh-hcc-c-ccCHHHhCCCCEEEEeeh
Confidence 999775 4789887765554 45555 7777888854 5999999998653 221 1 11111 1123778899
Q ss_pred cCCC--cCCceEEEEEeCC
Q 015609 363 HKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 363 HKtL--~GP~GG~I~~~~~ 379 (403)
.|++ .|-|-|+++.++.
T Consensus 310 SK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 310 SKYFGATGWRLGVIALHED 328 (527)
T ss_pred hhhccCcHhHHhhhhcCch
Confidence 9987 4455599988764
No 278
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=98.68 E-value=7.4e-07 Score=90.84 Aligned_cols=143 Identities=19% Similarity=0.201 Sum_probs=89.0
Q ss_pred EeC-ChHHHHHHHHhhh--ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec-CCCCCCCCHHHHHHHh
Q 015609 222 QPY-SCTSANFAVYTGL--LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV-NPQTGYIDYEKLEEKA 297 (403)
Q Consensus 222 ~~~-SGT~An~aal~al--l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v-d~~~g~ID~d~Le~~i 297 (403)
+.| ++++|+.+++.++ ++|||+|++.++.+.++.. .+...|. ++++++. ++++..+|++++++.+
T Consensus 98 ~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~---------~~~~~g~--~~v~v~~~~~~~~~~d~~~l~~~~ 166 (396)
T PRK09257 98 VQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRA---------IFEAAGL--EVKTYPYYDAATKGLDFDAMLADL 166 (396)
T ss_pred EecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHH---------HHHHcCC--cEEEEeccccccCccCHHHHHHHH
Confidence 445 4578988887655 5899999999988765431 2334443 4555554 3334679999999988
Q ss_pred ccCCC-cE-EEEeCCCC--Cccc---cHHHHHHHHHHcCCEEEEecccccccccc-ccccCC---CC-cc--cEEEEcCc
Q 015609 298 MDYRP-KI-LICGGSSY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIAA-KELASP---FD-YC--DIVTSTTH 363 (403)
Q Consensus 298 ~~~~p-kl-Viv~~s~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~-g~~~~p---~~-~a--Divt~StH 363 (403)
+..++ ++ +++...++ |... .+++|.++|+++++++++|.+-. .+... +....+ +. .. =+++.|+.
T Consensus 167 ~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~l~~~~~~~~~~~~~~~~~~~~vi~i~SfS 245 (396)
T PRK09257 167 SQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQ-GFGDGLEEDAYGLRAFAAAGLELLVASSFS 245 (396)
T ss_pred HhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccc-ccccchHHHHHHHHHHHhcCCcEEEEEEcC
Confidence 75333 34 44444444 4444 46788889999999999999842 33211 000001 11 11 26688999
Q ss_pred CCCc--CCceEEEEE
Q 015609 364 KSLR--GPRGGIIFF 376 (403)
Q Consensus 364 KtL~--GP~GG~I~~ 376 (403)
|++. |-|-|+++.
T Consensus 246 K~~~~~GlRiG~~~~ 260 (396)
T PRK09257 246 KNFGLYGERVGALSV 260 (396)
T ss_pred CcCccccccceeEEE
Confidence 9873 445588874
No 279
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=98.68 E-value=8.1e-08 Score=96.42 Aligned_cols=157 Identities=14% Similarity=0.139 Sum_probs=103.2
Q ss_pred HHHHHHHcCCCCCCCcceEEeCC-hHHHHHHHHhhhccCC-CeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015609 203 FERALKAFDLDSDNWGVNVQPYS-CTSANFAVYTGLLLPG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 203 rerla~lfg~~~~~~~v~V~~~S-GT~An~aal~all~pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
|+.+++++|++++ +|.+++ +++++..++.+++++| |+|++....+.... ..+...| .+++.++
T Consensus 66 r~aia~~~~~~~~----~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~---------~~~~~~g--~~v~~v~ 130 (354)
T PRK04635 66 INAYSAYAGVAPE----QILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYA---------ISAETFN--VGVKALP 130 (354)
T ss_pred HHHHHHHhCcCHH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH---------HHHHHcC--CEEEEEe
Confidence 5568889999885 566665 4579999999999999 89998876543221 1122334 3556666
Q ss_pred cCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHc-CCEEEEeccccccccccccccCCCC-ccc
Q 015609 281 VNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKC-GAVLMCDMAHISGLIAAKELASPFD-YCD 356 (403)
Q Consensus 281 vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~-Ga~LivDaAh~~Glia~g~~~~p~~-~aD 356 (403)
++. ++.+|++.++. + .++|+|++...++ |...+.+++.+|++.+ ++++++|.++.-- ........-.. +-.
T Consensus 131 ~~~-~~~~~~~~l~~-~--~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~-~~~~s~~~~~~~~~~ 205 (354)
T PRK04635 131 LTA-DYQLPLDYIEQ-L--DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEF-CPEYSVADLLASYPN 205 (354)
T ss_pred cCC-CCCCCHHHHHh-c--cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhh-ccCcchHHHHhhCCC
Confidence 653 46789998873 3 3689887765554 6789999999998864 7999999997532 11100000000 111
Q ss_pred -EEEEcCcCCCc--CCceEEEEEeCC
Q 015609 357 -IVTSTTHKSLR--GPRGGIIFFRRG 379 (403)
Q Consensus 357 -ivt~StHKtL~--GP~GG~I~~~~~ 379 (403)
+++.|++|+++ |-|-|+++.+++
T Consensus 206 ~iv~~S~SK~~~l~GlRlG~~i~~~~ 231 (354)
T PRK04635 206 LVVLRTLSKAFALAGARCGFTLANEE 231 (354)
T ss_pred EEEEechHHHhhhhHHHHhhhhCCHH
Confidence 56789999862 334488887654
No 280
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.67 E-value=5e-07 Score=92.14 Aligned_cols=211 Identities=22% Similarity=0.226 Sum_probs=116.0
Q ss_pred cccceeccC---cc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC-CCCCCCcceEEeCC
Q 015609 152 KGIELIASE---NF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD-LDSDNWGVNVQPYS 225 (403)
Q Consensus 152 ~~l~LiaSe---n~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg-~~~~~~~v~V~~~S 225 (403)
+.|.++++- |. .+|.+.+++..-...-+ ..+..|+ ++ ..++++ +++.++.+ .+. .++.+|
T Consensus 43 ~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~---h~sn~~~--~~---~~~~la-~~L~~~s~~~d~-----vff~NS 108 (404)
T COG4992 43 EYLDFAAGIAVNNLGHCHPALVEALKEQAEKLW---HVSNLFY--NE---PQAELA-EKLVELSPFADR-----VFFCNS 108 (404)
T ss_pred EeeeeccceeeeccCCCCHHHHHHHHHHHHHhh---hcccccC--Ch---HHHHHH-HHHHhhCccccE-----EEEcCC
Confidence 446655542 22 28888888877554433 2222222 22 223322 34667776 332 244568
Q ss_pred hHHHHHHHHhhhcc----C-CCeEEecCCCCCccccccccCCccchhhhcccc-----eEEeeeecCCCCCCCCHHHHHH
Q 015609 226 CTSANFAVYTGLLL----P-GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-----FESFPYKVNPQTGYIDYEKLEE 295 (403)
Q Consensus 226 GT~An~aal~all~----p-GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-----~~vv~~~vd~~~g~ID~d~Le~ 295 (403)
|++||.+++....+ + .-+|+.....+.|+. -+ .++..+.. |....-.+. .--.-|++++++
T Consensus 109 GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT-~g-------alS~t~~~ky~~~F~Pl~~g~~-~vpfnDi~al~~ 179 (404)
T COG4992 109 GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRT-LG-------ALSATGQPKYRKGFGPLLPGFR-HVPFNDIEALEA 179 (404)
T ss_pred cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCcc-ce-------eeeccCChhhccCCCCCCCCce-ecCCCCHHHHHH
Confidence 99999999976532 1 237888776665542 12 12222211 111100111 012468999999
Q ss_pred HhccCCCcEEEEeCC--CCCccc----cHHHHHHHHHHcCCEEEEecccccccccccccc-CC-CC-cccEEEEcCcCCC
Q 015609 296 KAMDYRPKILICGGS--SYPREW----DYGRFRQIADKCGAVLMCDMAHISGLIAAKELA-SP-FD-YCDIVTSTTHKSL 366 (403)
Q Consensus 296 ~i~~~~pklViv~~s--~~g~~~----Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~-~p-~~-~aDivt~StHKtL 366 (403)
++.+ ++..|++++- ..|.+. =+++++++|+++|++||+|..|.- +--.|.+. -. .. .-||++ .-|.|
T Consensus 180 ai~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG-~GRTGk~fA~e~~gV~PDI~t--laK~L 255 (404)
T COG4992 180 AIDE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTG-LGRTGKLFAYEHYGVEPDILT--LAKAL 255 (404)
T ss_pred Hhcc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccC-CCccchHHHHHHhCCCCCEEE--eeccc
Confidence 9987 6777888743 233322 278899999999999999999862 21112110 00 01 258877 45998
Q ss_pred cC--CceEEEEEeCCCCCcccCCCcccC
Q 015609 367 RG--PRGGIIFFRRGKKPRKQGIPLNHG 392 (403)
Q Consensus 367 ~G--P~GG~I~~~~~~~~~~~~~p~~qG 392 (403)
+| |-|+++.. +. ......|+.||
T Consensus 256 gGG~PigA~la~-~~--~~~~~~~G~Hg 280 (404)
T COG4992 256 GGGFPIGAMLAT-EE--IASAFTPGDHG 280 (404)
T ss_pred cCCccceeeEEc-hh--hhhcCCCCccc
Confidence 66 44555554 32 12235566665
No 281
>PRK05839 hypothetical protein; Provisional
Probab=98.65 E-value=1.6e-06 Score=87.97 Aligned_cols=155 Identities=14% Similarity=0.065 Sum_probs=93.0
Q ss_pred HHHHHcC--CCCCCCcceEEeCChH-HHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeee
Q 015609 205 RALKAFD--LDSDNWGVNVQPYSCT-SANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPY 279 (403)
Q Consensus 205 rla~lfg--~~~~~~~v~V~~~SGT-~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~ 279 (403)
.+++.+| .+++ +|+.++|+ +|+..++.+++ ++||.|++..+.+.... ..+...| ++++++
T Consensus 72 ~l~~~~g~~~~~~----~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~---------~~~~~~g--~~v~~v 136 (374)
T PRK05839 72 FFKRRFKIELKEN----ELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYE---------GAAIASR--AKVLLM 136 (374)
T ss_pred HHHHHhCCCCCcc----eEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhH---------HHHHhcC--CEEEEe
Confidence 3455556 4553 57777665 57777777664 57999999887664432 1123333 456677
Q ss_pred ecCCCC-CCCCHHHHHHHhccCCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC-
Q 015609 280 KVNPQT-GYIDYEKLEEKAMDYRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF- 352 (403)
Q Consensus 280 ~vd~~~-g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~- 352 (403)
+.++++ ..+|.++. .++ ++|+|++...++ |...+ +++|.++|+++|+++++|.+..- +...+..+..+
T Consensus 137 ~~~~~~~~~~d~~~~--~~~--~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~-~~~~~~~~s~~~ 211 (374)
T PRK05839 137 PLTKENDFTPSLNEK--ELQ--EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSE-IYENTPPPSLLE 211 (374)
T ss_pred ecccccCCcCCcchh--hhc--cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhh-cccCCCCCCHhh
Confidence 665432 34555443 232 588887765454 45554 66677788999999999998553 22111111101
Q ss_pred --------Cccc-EEEEcCcCCC--cCCceEEEEEeCC
Q 015609 353 --------DYCD-IVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 353 --------~~aD-ivt~StHKtL--~GP~GG~I~~~~~ 379 (403)
.+-. +++.|+.|++ .|-|-|+++.++.
T Consensus 212 ~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~ 249 (374)
T PRK05839 212 ASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDAS 249 (374)
T ss_pred hhcccCccccCcEEEEeccccccCCccceeEEEecCHH
Confidence 0111 6678999974 5667799998653
No 282
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=98.64 E-value=8.7e-07 Score=89.10 Aligned_cols=195 Identities=13% Similarity=0.072 Sum_probs=117.8
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC-hHH
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYS-CTS 228 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~S-GT~ 228 (403)
+.+.|-.++|. .++.+++++...+... .+|+.. + .. ..|+.++++++++++ +|+.++ +++
T Consensus 23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~~--~~Y~~~----~---~~----~Lr~aia~~~~v~~~----~I~it~G~~~ 85 (360)
T PRK07392 23 AILDFSASINPLGPPESVIAAIQSALSAL--RHYPDP----D---YR----ELRLALAQHHQLPPE----WILPGNGAAE 85 (360)
T ss_pred cEEEeCCcCCCCCCCHHHHHHHHHHHHHh--hcCCCc----C---HH----HHHHHHHHHhCcChh----hEEECCCHHH
Confidence 34666656565 4778888877655431 122211 1 11 135567888888875 465555 566
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCC----CCHHHHHHHhccCCCcE
Q 015609 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGY----IDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~----ID~d~Le~~i~~~~pkl 304 (403)
++..++.++ .+||+|++..+.+.+.. ..+...| .+++.++.+++++. .|++++++.. .++++
T Consensus 86 ~i~~~~~~l-~~g~~vlv~~P~y~~~~---------~~~~~~g--~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 151 (360)
T PRK07392 86 LLTWAGREL-AQLRAVYLITPAFGDYR---------RALRAFG--ATVKELPLPLDQPSPGLTLRLQTLPPQL--TPNDG 151 (360)
T ss_pred HHHHHHHHh-CCCCeEEEECCCcHHHH---------HHHHHcC--CeEEEEecccccCCcccccCHHHHHHhc--cCCCE
Confidence 888888775 47899999887664432 1223344 34556666543332 5677666543 24677
Q ss_pred EEEeCCCC--CccccHHHHHHHHHHcCCEEEEeccccccccccccccCCC---Ccc--cEEEEcCcCCC--cCCceEEEE
Q 015609 305 LICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF---DYC--DIVTSTTHKSL--RGPRGGIIF 375 (403)
Q Consensus 305 Viv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~---~~a--Divt~StHKtL--~GP~GG~I~ 375 (403)
+++...++ |...+-++|.++|+++++ +++|.++. .+...+..+..+ +.. =+++.|+.|++ .|-|-|+++
T Consensus 152 ~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~-~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v 229 (360)
T PRK07392 152 LLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFM-DFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAI 229 (360)
T ss_pred EEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchh-hhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeee
Confidence 77665554 578889999999999985 66799864 222211111111 111 16778999987 456679999
Q ss_pred EeCC
Q 015609 376 FRRG 379 (403)
Q Consensus 376 ~~~~ 379 (403)
++.+
T Consensus 230 ~~~~ 233 (360)
T PRK07392 230 AHPD 233 (360)
T ss_pred CCHH
Confidence 8653
No 283
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=98.63 E-value=1.1e-06 Score=88.98 Aligned_cols=190 Identities=17% Similarity=0.129 Sum_probs=104.4
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhccCC--
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPG-- 241 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~pG-- 241 (403)
.|.|.+++...+.... .....| ..+...+++ ++++++++.+. .+++.||++|+.+++..+..++
T Consensus 57 ~p~v~~a~~~~~~~~~---~~~~~~--~~~~~~~la----~~l~~~~~~~~-----v~~~~gg~eA~~~al~~a~~~~~~ 122 (396)
T PRK02627 57 HPKLVEAIQEQAAKLI---HTSNLY--YIEPQEELA----EKLVELSGMDK-----VFFCNSGAEANEAAIKLARKYGHK 122 (396)
T ss_pred CHHHHHHHHHHHhhcc---cccccc--CCHHHHHHH----HHHHhhcCCCE-----EEECCCcHHHHHHHHHHHHHHhcc
Confidence 4777777766554321 111112 123333333 45777777653 3556789999999999775443
Q ss_pred -----CeEEecCCCCCccccccccCCccchhhhcccc-eEEeeeecCCCC---CCCCHHHHHHHhccCCCcEEEEeCCCC
Q 015609 242 -----DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-FESFPYKVNPQT---GYIDYEKLEEKAMDYRPKILICGGSSY 312 (403)
Q Consensus 242 -----D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-~~vv~~~vd~~~---g~ID~d~Le~~i~~~~pklViv~~s~~ 312 (403)
++|++....+.|... ..+...+.. +.....++...- ...|++++++++. .++++|++.+...
T Consensus 123 ~~~~~~~ii~~~~~yhg~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~vii~p~~~ 193 (396)
T PRK02627 123 KGIEKPEIITAENSFHGRTL--------ATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAIT-DKTAAVMLEPIQG 193 (396)
T ss_pred cCCCCCeEEEECCCcCcccH--------HHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcC-CCeEEEEEecccC
Confidence 568777655433210 011111110 000001111000 0238999999985 3678888865322
Q ss_pred --C-cc---ccHHHHHHHHHHcCCEEEEeccccccccccccc-c-CCCC-cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015609 313 --P-RE---WDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL-A-SPFD-YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 313 --g-~~---~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~-~-~p~~-~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
| .. ..+++|.++|+++|++|++|.+|. |+...+.. . ..++ ..|+++ +.|.+.+ -+-|+++++++
T Consensus 194 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~~~~~~~~~~pdi~t--~sK~~~~G~rig~~~~~~~ 267 (396)
T PRK02627 194 EGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKLFAYQHYGIEPDIMT--LAKGLGGGVPIGAVLAKEK 267 (396)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCceeeehhcCCCCCEEE--EcchhhCCcccEEEEEcHH
Confidence 2 12 248999999999999999999987 43222211 0 1111 257665 5598852 23477777654
No 284
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=98.62 E-value=1e-07 Score=95.70 Aligned_cols=158 Identities=14% Similarity=0.120 Sum_probs=103.0
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCC-hHHHHHHHHhhhccCC-CeEEecCCCCCccccccccCCccchhhhcccceEEeee
Q 015609 202 CFERALKAFDLDSDNWGVNVQPYS-CTSANFAVYTGLLLPG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPY 279 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~S-GT~An~aal~all~pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~ 279 (403)
.++.+++.+|++++ +|.+++ +++++..++.+++++| |+|++....|.... ..+...| .+++.+
T Consensus 62 l~~~~a~~~g~~~~----~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~---------~~~~~~G--~~~~~v 126 (351)
T PRK01688 62 VIENYAAYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS---------VSAETIG--VEIRTV 126 (351)
T ss_pred HHHHHHHHhCCCHH----HEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHH---------HHHHHcC--CEEEEe
Confidence 35568889999885 566665 5679999999999997 89999876653211 1223344 345555
Q ss_pred ecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHHHHHc--CCEEEEeccccccccccccccCCCC-c
Q 015609 280 KVNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQIADKC--GAVLMCDMAHISGLIAAKELASPFD-Y 354 (403)
Q Consensus 280 ~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~Iake~--Ga~LivDaAh~~Glia~g~~~~p~~-~ 354 (403)
+.++ +..+|++++++++. ++++|++...++ |..++.+++.+|++.+ ++++++|.++.- +........-+. +
T Consensus 127 ~~~~-~~~~d~~~l~~~~~--~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~-f~~~~s~~~~~~~~ 202 (351)
T PRK01688 127 PTLD-NWQLDLPAIADNLD--GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIE-FCPQASLAGWLAEY 202 (351)
T ss_pred ecCC-CCCCCHHHHHHhcc--CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhh-cCCCCChHHHHhhC
Confidence 6653 46799999998873 688887765554 6788877777776543 689999999642 211100000011 1
Q ss_pred cc-EEEEcCcCCCcCCce---EEEEEeCC
Q 015609 355 CD-IVTSTTHKSLRGPRG---GIIFFRRG 379 (403)
Q Consensus 355 aD-ivt~StHKtL~GP~G---G~I~~~~~ 379 (403)
.. +++.|++|++ |..| |+++++++
T Consensus 203 ~n~iv~rSfSK~~-glaGlRiGy~i~~~~ 230 (351)
T PRK01688 203 PHLVILRTLSKAF-ALAGLRCGFTLANEE 230 (351)
T ss_pred CCEEEEecchHhh-cCHHHHHhHHhCCHH
Confidence 23 6778999976 4444 88887654
No 285
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=98.61 E-value=9.6e-07 Score=89.16 Aligned_cols=191 Identities=17% Similarity=0.096 Sum_probs=103.7
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-cCC
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL-LPG 241 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all-~pG 241 (403)
.+|+|.+++...+.+.. ..+..++ . +++....+++++.++.+. .++++||++||.+++.... .+|
T Consensus 46 ~~p~v~~a~~~~~~~~~---~~~~~~~--~----~~~~~la~~l~~~~~~~~-----~~~~~sG~~a~~~A~~~a~~~~g 111 (377)
T PRK02936 46 CHPTVTKAVQEQLDDIW---HVSNLFT--N----SLQEEVASLLAENSAGDL-----VFFCNSGAEANEAALKLARKHTG 111 (377)
T ss_pred CCHHHHHHHHHHHHhcc---ccccccC--C----HHHHHHHHHHHhcCCCCE-----EEEeCCcHHHHHHHHHHHHHhcC
Confidence 37788888777665421 1111111 2 223233345666665432 3567799999999998542 244
Q ss_pred -CeEEecCCCCCccccccccCCccchhhhcccc-eEEeeeecCCCC---CCCCHHHHHHHhccCCCcEEEEeCCC--CCc
Q 015609 242 -DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-FESFPYKVNPQT---GYIDYEKLEEKAMDYRPKILICGGSS--YPR 314 (403)
Q Consensus 242 -D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-~~vv~~~vd~~~---g~ID~d~Le~~i~~~~pklViv~~s~--~g~ 314 (403)
++|++.+..+.|..-. .+...+.. +.....+..++. ...|++++++++.+ ++++|+++... .|.
T Consensus 112 ~~~vi~~~~~~Hg~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ii~e~i~~~~G~ 182 (377)
T PRK02936 112 KSKIVTFEQSFHGRTFG--------TMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE-EVAAVMLEVVQGEGGV 182 (377)
T ss_pred CCeEEEECCCcCCCcHH--------hhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC-CeEEEEEecccCCCCC
Confidence 5688776544332110 11111110 000000000000 12378999998863 57778776432 222
Q ss_pred ----cccHHHHHHHHHHcCCEEEEecccccccccccccc--CCCC-cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015609 315 ----EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPFD-YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 315 ----~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~~-~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
...+++|.++|+++|+++++|.+|. |+...+... ..+. ..|++ ++.|+|.+ -++|+++.+++
T Consensus 183 ~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~ig~v~~~~~ 252 (377)
T PRK02936 183 IPADPAFLQEVQTLCKKFGALLIIDEVQT-GIGRTGTLFAYEQFGLDPDIV--TVAKGLGNGIPVGAMIGKKE 252 (377)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhhCCCCcEE--EEcccccCCCccEEEEEcHH
Confidence 2349999999999999999999994 543322110 0111 24665 47899853 24688887654
No 286
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.56 E-value=2.5e-06 Score=87.87 Aligned_cols=191 Identities=21% Similarity=0.167 Sum_probs=116.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEE-eCChHHHHHHHHhhh--ccC
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQ-PYSCTSANFAVYTGL--LLP 240 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~-~~SGT~An~aal~al--l~p 240 (403)
+|.|.+|+...+.+....|.|. ..++| .-+.+.+++..-. -|. .+|||+|+..+++.. .-.
T Consensus 71 ~p~V~~Av~~~l~~G~~fg~Pt---------e~Ei~--~Aell~~~~p~~e-----~vrfvnSGTEAtmsAiRlARa~Tg 134 (432)
T COG0001 71 HPAVVEAVQEQLERGLSFGAPT---------ELEVE--LAELLIERVPSIE-----KVRFVNSGTEATMSAIRLARAYTG 134 (432)
T ss_pred CHHHHHHHHHHHHhcCCCCCCC---------HHHHH--HHHHHHHhcCccc-----EEEEecchhHHHHHHHHHHHHhhC
Confidence 7788888888776655444333 33444 4467888888743 244 468999999998754 234
Q ss_pred CCeEEecCCCCCccccccccCCccch------hhhcccc--e--EEeeeecCCCCCCCCHHHHHHHhccCCC--cEEEEe
Q 015609 241 GDRIMGLDSPSGGHLSHGYHTPGGKK------VSAASIF--F--ESFPYKVNPQTGYIDYEKLEEKAMDYRP--KILICG 308 (403)
Q Consensus 241 GD~VL~~~~ehgghlsh~~~~~~~~~------v~~~g~~--~--~vv~~~vd~~~g~ID~d~Le~~i~~~~p--klViv~ 308 (403)
.|+|+...-.|.||..-..+.. +.. -...|.. + .++.+ -..|++.+++++++... ..||++
T Consensus 135 R~kIikF~G~YHG~~D~~lv~a-gsg~~t~g~p~s~Gvp~~~a~~ti~~------~yND~~al~~~~~~~g~~IAaVIvE 207 (432)
T COG0001 135 RDKIIKFEGCYHGHSDSLLVKA-GSGAATLGSPSSPGVPADVAKHTLVL------PYNDLEALEEAFEEYGDDIAAVIVE 207 (432)
T ss_pred CCeEEEEcCCCCCCccHHHhhc-CcCcccCCCCCCCCCChhhhccEEEe------cCCCHHHHHHHHHHcCCcEEEEEec
Confidence 5899999888877742111100 000 0001110 0 11111 24799999999987643 456776
Q ss_pred C--CCCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015609 309 G--SSYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 309 ~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
+ .+.|.+.+ ++.++++|+++|++||.|..+..--++.+..+.-+. ..|+.| .-|.++| -+-|++-++++
T Consensus 208 Pv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDltt--lGKiIGGGlP~ga~gGr~e 284 (432)
T COG0001 208 PVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTT--LGKIIGGGLPIGAFGGRAE 284 (432)
T ss_pred cccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhh--hhhhhcCCcceeeeccHHH
Confidence 4 35565444 788899999999999999986643344333332222 267755 6698854 34577777765
No 287
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=98.56 E-value=1.7e-06 Score=87.85 Aligned_cols=202 Identities=19% Similarity=0.203 Sum_probs=127.6
Q ss_pred ccceeccCccCc--HHHHHHHHHHhh--hcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC-CCCCCCcceEEeCC-h
Q 015609 153 GIELIASENFVC--RAVMEALGSHLT--NKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD-LDSDNWGVNVQPYS-C 226 (403)
Q Consensus 153 ~l~LiaSen~~~--p~V~eA~~s~l~--~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg-~~~~~~~v~V~~~S-G 226 (403)
-+.|-+.||+.. +.+++++...+. ++| |.. . ..+ .++.+++++| .+.+ +|..+. .
T Consensus 24 ~i~LssNenP~gp~~~~~~~~~~~~~~~~rY----Pd~------~-~~~----l~~a~a~~~~~~~~~----~V~~gnGs 84 (356)
T COG0079 24 IIKLSSNENPYGPPPKVIEAIRAALDKLNRY----PDP------D-YRE----LRAALAEYYGVVDPE----NVLVGNGS 84 (356)
T ss_pred ceeecCCCCCCCCCHHHHHHHHHHHHhhccC----CCC------c-HHH----HHHHHHHHhCCCCcc----eEEEcCCh
Confidence 466888889874 778887776543 233 221 1 122 3456888999 6653 566555 4
Q ss_pred HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEE
Q 015609 227 TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILI 306 (403)
Q Consensus 227 T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklVi 306 (403)
++.+..++.+++.+||+|++....++-+- ......|. +++.++.++ ..+|++.+.+.+.+ ++++|+
T Consensus 85 de~i~~l~~~~~~~gd~vl~~~Ptf~~Y~---------~~a~~~g~--~~~~v~~~~--~~~d~~~~~~~~~~-~~~lv~ 150 (356)
T COG0079 85 DELIELLVRAFVEPGDTVLIPEPTFSMYE---------IAAQLAGA--EVVKVPLKE--FRLDLDAILAAIRD-KTKLVF 150 (356)
T ss_pred HHHHHHHHHHhhcCCCEEEEcCCChHHHH---------HHHHhcCC--eEEEecccc--cccCHHHHHHhhhc-CCCEEE
Confidence 57888889999999999999887653321 11233343 445444442 67999999999886 789998
Q ss_pred EeCCCC--CccccHHHHHHHHHHc--CCEEEEeccccccccccccccCCCCccc--EEEEcCcCCC--cCCceEEEEEeC
Q 015609 307 CGGSSY--PREWDYGRFRQIADKC--GAVLMCDMAHISGLIAAKELASPFDYCD--IVTSTTHKSL--RGPRGGIIFFRR 378 (403)
Q Consensus 307 v~~s~~--g~~~Di~~I~~Iake~--Ga~LivDaAh~~Glia~g~~~~p~~~aD--ivt~StHKtL--~GP~GG~I~~~~ 378 (403)
++.+++ |...+.++|.+++... +++|++|.|-+ -....... ..+.+.+ +++=|+.|.+ .|-|-|+.+.+.
T Consensus 151 i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~-eF~~~~~~-~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~ 228 (356)
T COG0079 151 LCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYI-EFSPESSL-ELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP 228 (356)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchh-hcCCchhh-hhccCCCCEEEEEecHHhhhcchhceeeccCCH
Confidence 876665 5677777777777654 88999999832 22211000 0011233 5566999964 456669987776
Q ss_pred C--CCCcccCCCc
Q 015609 379 G--KKPRKQGIPL 389 (403)
Q Consensus 379 ~--~~~~~~~~p~ 389 (403)
+ ..+++...|+
T Consensus 229 ~~i~~l~~vr~p~ 241 (356)
T COG0079 229 ELIAALNKVRPPF 241 (356)
T ss_pred HHHHHHHHhcCCC
Confidence 4 2344444443
No 288
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.55 E-value=6.8e-07 Score=90.23 Aligned_cols=196 Identities=19% Similarity=0.183 Sum_probs=135.2
Q ss_pred ccceeccCccC----cHHHHHHHHHHhhhcCCCCCCCCccccchHHH-HHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015609 153 GIELIASENFV----CRAVMEALGSHLTNKYSEGYPGARYYTGNQYI-DQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 153 ~l~LiaSen~~----~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~-~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
.+..+||.||+ .+.+++.....+ .+|+-|.-|-|-+.|+..+ -.+| +++++++|++.+ ++..-|-
T Consensus 95 ~~~N~aS~NfL~l~~~~~ike~a~~~l-rkyGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~a-----ivYs~gF 164 (467)
T KOG1358|consen 95 DVLNFASANFLGLIENEEIKEEASFTL-RKYGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTEDA-----IVYSYGF 164 (467)
T ss_pred eeecccchhhhhhcccHHHHHHHHHHH-HHhCCCCcCCCcccccceeecccH----HHHHHhhCCcce-----eeecccc
Confidence 34457899997 788888877665 5688888887766676433 3355 469999999984 5566688
Q ss_pred HHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccC------C
Q 015609 228 SANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDY------R 301 (403)
Q Consensus 228 ~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~------~ 301 (403)
+++..++.++.+.||.|.+.... +++. . +.+++. + -.+.+|. ..|++++|.++.+. +
T Consensus 165 ~ti~S~ipafsKrGDIi~~de~~---nfaI---q---~GlqlS-R-S~i~~Fk------hndm~~lerll~E~~~~~~K~ 227 (467)
T KOG1358|consen 165 STIESAIPAFSKRGDIIFVDEAV---NFAI---Q---KGLQLS-R-STISYFK------HNDMEDLERLLPEQEDEDQKN 227 (467)
T ss_pred chhhhcchhhhccCcEEEEehhh---hHHH---H---HHHhhh-h-heeEEec------CCCHHHHHHhccCcchhhhhc
Confidence 88899999999999999887633 2210 0 112221 1 1234444 46888888776542 1
Q ss_pred C------cEEEEe--CCCCCccccHHHHHHHHHHcCCEEEEecccccccccc---ccc---cCCCCcccEEEEcCcCCCc
Q 015609 302 P------KILICG--GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAA---KEL---ASPFDYCDIVTSTTHKSLR 367 (403)
Q Consensus 302 p------klViv~--~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~---g~~---~~p~~~aDivt~StHKtL~ 367 (403)
| +.|++. ..++|.+.|+.+|.++..||...+++|.+-.+|..+. |+. ..+.+.+|++++++--+|.
T Consensus 228 ~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~ala 307 (467)
T KOG1358|consen 228 PKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALA 307 (467)
T ss_pred cccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccccccc
Confidence 2 234554 3578999999999999999999999999999998774 221 1233469999999887764
Q ss_pred CCceEEEEE
Q 015609 368 GPRGGIIFF 376 (403)
Q Consensus 368 GP~GG~I~~ 376 (403)
-.||+.+.
T Consensus 308 -s~GgFc~G 315 (467)
T KOG1358|consen 308 -SGGGFCAG 315 (467)
T ss_pred -ccCceeec
Confidence 34555554
No 289
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.54 E-value=2.9e-06 Score=86.45 Aligned_cols=193 Identities=17% Similarity=0.141 Sum_probs=107.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh-ccCC-
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL-LLPG- 241 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al-l~pG- 241 (403)
+|.|.+++...+.+.. ..+..+ .++...+++ ++++++++.+. .++.+|||+|+.++++.. ..+|
T Consensus 42 ~p~v~~ai~~ql~~~~---~~~~~~--~~~~~~~la----~~l~~~~~~~~-----v~~~~SGseA~e~Alklar~~~gr 107 (364)
T PRK04013 42 HPEWVEEMSEQLEKLV---VAGPMF--EHEEKEEML----EELSKWVNYEY-----VYMGNSGTEAVEAALKFARLYTGR 107 (364)
T ss_pred CHHHHHHHHHHHHhcC---CccCCc--CCHHHHHHH----HHHHhhcCCCE-----EEEeCchHHHHHHHHHHHHHHhCC
Confidence 6788888777665421 111122 123333333 35777776653 355679999999999866 3345
Q ss_pred CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC--CC-cccc-
Q 015609 242 DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS--YP-REWD- 317 (403)
Q Consensus 242 D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~--~g-~~~D- 317 (403)
++|++....+.|... +.+...+.+... ..+.....++.. ....|++.+++.+.+ +++.|++.+.. .| ...|
T Consensus 108 ~~Ii~~~~syHG~t~-~~ls~~~~~~~~--~~~~p~~~~~~~-~~~~d~~~l~~~i~~-~~aAvivEpi~g~gG~~~~~~ 182 (364)
T PRK04013 108 KEIIAMTNAFHGRTM-GALSATWKPKYR--EDFEPLVPGFKH-IPFNDVEAAKEAITK-ETAAVIFEPIQGEGGIVPAKE 182 (364)
T ss_pred CEEEEECCccccCch-hhccCCCCcccc--cCCCCCCCCcEE-ecCCCHHHHHHHhcC-CcEEEEEcCCcCCCCCcCCCH
Confidence 889998876655421 111000000000 001100001110 012378889888863 56777776432 22 3455
Q ss_pred --HHHHHHHHHHcCCEEEEecccccccccccccc--CCCC-cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015609 318 --YGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPFD-YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 318 --i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~~-~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
+++|+++|+++|+++|+|.+|. |+ ..|... .-++ ..|++++ -|.|.| -+-++++.+.+
T Consensus 183 ~yl~~lr~lc~~~gillI~DEv~t-G~-RtG~~~a~~~~gv~PDiv~~--gK~lggG~P~~a~~~~~~ 246 (364)
T PRK04013 183 EFVKTLRDLTEDVGALLIADEVQS-GL-RTGKFLAIEHYKVEPDIVTM--GKGIGNGVPVSLTLTNFD 246 (364)
T ss_pred HHHHHHHHHHHHcCCEEEEechhh-cC-CCCchhHHHhcCCCCCEEEe--cccccCCceeEEEEeccc
Confidence 9999999999999999999987 44 333211 1122 2788886 688854 22345555543
No 290
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.53 E-value=3.1e-07 Score=93.45 Aligned_cols=171 Identities=16% Similarity=0.180 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc---cC-----C-----CeEEecCCCCCccccccccCCc
Q 015609 197 QIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL---LP-----G-----DRIMGLDSPSGGHLSHGYHTPG 263 (403)
Q Consensus 197 ~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all---~p-----G-----D~VL~~~~ehgghlsh~~~~~~ 263 (403)
.+|.+.-.++.++.|-+...+ .++..+|+-+|.-++.+.- -| | +-|+.++-+ +|.| +.
T Consensus 141 lmE~~vl~km~~ivGw~~~~D--gIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSee--sHYS---i~-- 211 (510)
T KOG0629|consen 141 LMEEEVLAKMREIVGWEEGGD--GIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEE--SHYS---IK-- 211 (510)
T ss_pred eehHHHHHHHHHHhCCCCCCC--ceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEeccc--chhh---HH--
Confidence 355555666778888776433 3555577777766554321 11 1 345544433 3433 21
Q ss_pred cchhhhcccc-eEEeeeecCCCCCCCCHHHHHHHhccCC-----CcEEEE--eCCCCCccccHHHHHHHHHHcCCEEEEe
Q 015609 264 GKKVSAASIF-FESFPYKVNPQTGYIDYEKLEEKAMDYR-----PKILIC--GGSSYPREWDYGRFRQIADKCGAVLMCD 335 (403)
Q Consensus 264 ~~~v~~~g~~-~~vv~~~vd~~~g~ID~d~Le~~i~~~~-----pklViv--~~s~~g~~~Di~~I~~Iake~Ga~LivD 335 (403)
+...+.|.+ -..+.++.| +.|.+++++||++|.+.+ |-+|-+ +.+.+|..-|+..|++||++|+.++|||
T Consensus 212 -kaAa~lg~gtd~c~~v~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvD 289 (510)
T KOG0629|consen 212 -KAAAFLGLGTDHCIKVKTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVD 289 (510)
T ss_pred -HHHHHhccCCceeEEeccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEee
Confidence 233445543 244556666 479999999999986543 445543 3456888899999999999999999999
Q ss_pred ccccccccccccccCCC---CcccEEEEcCcCCCcCCc-eEEEEEeC
Q 015609 336 MAHISGLIAAKELASPF---DYCDIVTSTTHKSLRGPR-GGIIFFRR 378 (403)
Q Consensus 336 aAh~~Glia~g~~~~p~---~~aDivt~StHKtL~GP~-GG~I~~~~ 378 (403)
+|-+-|+.-......-+ +-+|.|+-+.||+++.|. .++++++.
T Consensus 290 AAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~ 336 (510)
T KOG0629|consen 290 AAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTRE 336 (510)
T ss_pred cccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHH
Confidence 99777765543322222 349999999999987775 46665554
No 291
>PTZ00376 aspartate aminotransferase; Provisional
Probab=98.53 E-value=7.5e-07 Score=91.20 Aligned_cols=141 Identities=16% Similarity=0.217 Sum_probs=87.9
Q ss_pred eCChHHHHHHHHh---hhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecC-CCCCCCCHHHHHHHhc
Q 015609 223 PYSCTSANFAVYT---GLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVN-PQTGYIDYEKLEEKAM 298 (403)
Q Consensus 223 ~~SGT~An~aal~---all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd-~~~g~ID~d~Le~~i~ 298 (403)
+.+++.|+.+++. ++++|||+|++.++.|.+... .+...|. ++++++.. +++..+|++.++++++
T Consensus 103 t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~---------~~~~~G~--~~~~v~l~~~~~~~~d~~~l~~~~~ 171 (404)
T PTZ00376 103 ALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN---------IFKSAGL--NVKEYRYYDPKTKGLDFDGMLEDLR 171 (404)
T ss_pred ccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH---------HHHHcCC--ceeeccccCcccCCcCHHHHHHHHH
Confidence 4456677776654 668999999999987755431 2344443 45555552 2346799999999986
Q ss_pred cCC--CcEEEEeCCCC--Cccc---cHHHHHHHHHHcCCEEEEecccccccccccc---cc--CCCC-cc-c-EEEEcCc
Q 015609 299 DYR--PKILICGGSSY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKE---LA--SPFD-YC-D-IVTSTTH 363 (403)
Q Consensus 299 ~~~--pklViv~~s~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~---~~--~p~~-~a-D-ivt~StH 363 (403)
+.+ ++++++...++ |... .+++|.++|+++|+++++|.+.. .+...+. .. ..+. .. . +++.|+.
T Consensus 172 ~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfS 250 (404)
T PTZ00376 172 TAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQ-GFASGDLDKDAYAIRLFAERGVEFLVAQSFS 250 (404)
T ss_pred hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhc-CccCCCHHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 432 35555554444 4444 56777888999999999999832 2222110 00 0011 11 2 6778999
Q ss_pred CCCc--CCceEEEE
Q 015609 364 KSLR--GPRGGIIF 375 (403)
Q Consensus 364 KtL~--GP~GG~I~ 375 (403)
|++. |-|-|+++
T Consensus 251 K~~~~~GlRvG~~~ 264 (404)
T PTZ00376 251 KNMGLYGERIGALH 264 (404)
T ss_pred CcccccccccceEE
Confidence 9974 55658874
No 292
>PLN02624 ornithine-delta-aminotransferase
Probab=98.52 E-value=3.8e-06 Score=88.39 Aligned_cols=191 Identities=15% Similarity=0.155 Sum_probs=103.5
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc----
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL---- 239 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~---- 239 (403)
+|.|.+++...+.. +..+ ...+. ++...++ .++++++++.+. .++.+||++||.++++....
T Consensus 93 ~p~v~~ai~~ql~~-~~~~--~~~~~--~~~~~~l----a~~L~~~~~~~~-----~~f~~SGseA~e~AlklAr~~~~~ 158 (474)
T PLN02624 93 HPKIIKALTEQAEK-LTLS--SRAFY--NDKFPEF----AEYLTSMFGYDM-----VLPMNTGAEGVETAIKLARKWGYE 158 (474)
T ss_pred CHHHHHHHHHHHHh-cCCc--ccccC--CHHHHHH----HHHHHhhcCCCe-----EEEeCChHHHHHHHHHHHHHHHHh
Confidence 78888887776643 3211 11121 2222223 345778887653 35677999999999874321
Q ss_pred ----C-CC-eEEecCCCCCccccccccCCccchhhhcccceEEeee-ecCCC---CCCCCHHHHHHHhccC--CCcEEEE
Q 015609 240 ----P-GD-RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPY-KVNPQ---TGYIDYEKLEEKAMDY--RPKILIC 307 (403)
Q Consensus 240 ----p-GD-~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~-~vd~~---~g~ID~d~Le~~i~~~--~pklViv 307 (403)
+ +. +|+.....+ ||... -.++..+.......| +..+. -...|++.++++++.. +.++|++
T Consensus 159 ~~g~~~~~~~ii~~~~~y-----HG~t~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiii 230 (474)
T PLN02624 159 KKGIPKNEAIIVSCCGCF-----HGRTL---AAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLF 230 (474)
T ss_pred hcCCCCCCcEEEEECCCc-----CCCCH---HHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEE
Confidence 1 33 455554333 32100 011111110000000 00000 0123789999988643 3456777
Q ss_pred eCC--CCCcccc----HHHHHHHHHHcCCEEEEecccccccccccc-ccCCC-C-cccEEEEcCcCCCcCC--ceEEEEE
Q 015609 308 GGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKE-LASPF-D-YCDIVTSTTHKSLRGP--RGGIIFF 376 (403)
Q Consensus 308 ~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~-~~~p~-~-~aDivt~StHKtL~GP--~GG~I~~ 376 (403)
++. ..|.+.+ +++|+++|+++|+++++|.+|. |+...|. ..... + ..|+++++ |.|+|. +.|+++.
T Consensus 231 Epv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~ls--K~lggG~~pigav~~ 307 (474)
T PLN02624 231 EPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVILG--KALGGGVIPVSAVLA 307 (474)
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEec--ccccCCCCcceeeee
Confidence 643 3455555 9999999999999999999997 5422221 11111 1 26888875 998654 4466766
Q ss_pred eCC
Q 015609 377 RRG 379 (403)
Q Consensus 377 ~~~ 379 (403)
+++
T Consensus 308 ~~~ 310 (474)
T PLN02624 308 DKD 310 (474)
T ss_pred cHH
Confidence 653
No 293
>PRK12403 putative aminotransferase; Provisional
Probab=98.51 E-value=3.1e-06 Score=88.71 Aligned_cols=85 Identities=19% Similarity=0.245 Sum_probs=51.8
Q ss_pred HHHHHHhcc---CCCcEEEEeC--CCCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEE
Q 015609 291 EKLEEKAMD---YRPKILICGG--SSYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVT 359 (403)
Q Consensus 291 d~Le~~i~~---~~pklViv~~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt 359 (403)
+++++.+.+ .+...||+++ +..|.+.+ +++++++|+++|++||+|.+|+ +|-...+....-++ ..|+++
T Consensus 209 ~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~ 288 (460)
T PRK12403 209 LQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS 288 (460)
T ss_pred HHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEE
Confidence 556665532 2234566663 23355555 9999999999999999999994 33322211111122 268887
Q ss_pred EcCcCCCc-C--CceEEEEEeC
Q 015609 360 STTHKSLR-G--PRGGIIFFRR 378 (403)
Q Consensus 360 ~StHKtL~-G--P~GG~I~~~~ 378 (403)
+-|.|. | |-|+++ +++
T Consensus 289 --~gK~lggG~~Piga~v-~~~ 307 (460)
T PRK12403 289 --IAKGLTSGYVPMGGLV-LSK 307 (460)
T ss_pred --EcccccccccceEEEE-ECH
Confidence 679886 3 556666 443
No 294
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=98.50 E-value=4.2e-06 Score=84.72 Aligned_cols=146 Identities=15% Similarity=0.071 Sum_probs=84.9
Q ss_pred EEeCChHHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchhhhcccc-----eEEeeeecCCCCCCCCHHHH
Q 015609 221 VQPYSCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-----FESFPYKVNPQTGYIDYEKL 293 (403)
Q Consensus 221 V~~~SGT~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-----~~vv~~~vd~~~g~ID~d~L 293 (403)
+++.|||+||.+++..+. ..+++|++.+..+.|.... .+...+.. +......+. .....|++.+
T Consensus 88 ~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~~dl~~l 158 (375)
T PRK04260 88 FFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFG--------SMSATGQDKIKDGFGDGVPHFS-YAIFNDLNSV 158 (375)
T ss_pred EEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHH--------HHhccCCcccCCCCCCCCCCeE-EeCCCCHHHH
Confidence 456789999999888663 4567888876554332110 11111110 100000000 0113589999
Q ss_pred HHHhccCCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccccC--CCC-cccEEEEcCcC
Q 015609 294 EEKAMDYRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PFD-YCDIVTSTTHK 364 (403)
Q Consensus 294 e~~i~~~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~~-~aDivt~StHK 364 (403)
++++.+ +.++|+++.. ..|...+ +++|.++|+++|+++++|.+|. |+...+.... -.. .-|++ |+.|
T Consensus 159 ~~~l~~-~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~--t~sK 234 (375)
T PRK04260 159 KALVNK-NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIF--TLAK 234 (375)
T ss_pred HHhcCC-CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEE--Eecc
Confidence 988753 4567777532 3344333 8999999999999999999985 6533332110 111 25655 6789
Q ss_pred CCc-CCceEEEEEeCC
Q 015609 365 SLR-GPRGGIIFFRRG 379 (403)
Q Consensus 365 tL~-GP~GG~I~~~~~ 379 (403)
+|. |-+.|+++.+++
T Consensus 235 ~l~~G~~ig~~~~~~~ 250 (375)
T PRK04260 235 GLANGVPVGAMLAKSS 250 (375)
T ss_pred cccCCcceEEEEEcHH
Confidence 985 335677777654
No 295
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=98.49 E-value=6.2e-06 Score=84.43 Aligned_cols=153 Identities=17% Similarity=0.126 Sum_probs=90.3
Q ss_pred HHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--------cCCCeEEecCCCCCccccccccCCccchhhhccc---
Q 015609 204 ERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--------LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI--- 272 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~~~SGT~An~aal~all--------~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~--- 272 (403)
++++++++.+. .++++||++||.+++.... ...++|+..+..+.|... + .++..+.
T Consensus 89 ~~l~~~~~~~~-----~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~-~-------~~~~~~~~~~ 155 (403)
T PRK05093 89 KKLIDATFAER-----VFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTL-F-------TVSVGGQPKY 155 (403)
T ss_pred HHHHhhCCCCE-----EEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchh-h-------hHhhcCChhh
Confidence 45777776543 4667899999999998541 123467777655433211 0 0111110
Q ss_pred --ce-----EEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCC-CCcc-----ccHHHHHHHHHHcCCEEEEecccc
Q 015609 273 --FF-----ESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSS-YPRE-----WDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 273 --~~-----~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~-~g~~-----~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
.+ .+..++ ..|++++++.+.+ ++++|++++.+ .+.. -.+++|.++|+++|+++++|.+|.
T Consensus 156 ~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~ 228 (403)
T PRK05093 156 SDGFGPKPADITHVP------FNDLAAVKAVIDD-HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT 228 (403)
T ss_pred hhcCCCCCCCcEEeC------CCCHHHHHHHhcC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 00 111111 2488999998863 57888887432 2222 238999999999999999999988
Q ss_pred ccccccccccC--CCC-cccEEEEcCcCCCc-CCceEEEEEeCC
Q 015609 340 SGLIAAKELAS--PFD-YCDIVTSTTHKSLR-GPRGGIIFFRRG 379 (403)
Q Consensus 340 ~Glia~g~~~~--p~~-~aDivt~StHKtL~-GP~GG~I~~~~~ 379 (403)
|+...|.... .++ ..|++ |+.|++. |-+.|+++.+++
T Consensus 229 -g~g~~g~~~~~~~~~~~pdi~--s~sK~l~~G~rig~vv~~~~ 269 (403)
T PRK05093 229 -GMGRTGDLFAYMHYGVTPDIL--TSAKALGGGFPIGAMLTTAE 269 (403)
T ss_pred -CCCCCccchhhhhcCCCCCEE--EecccccCCcceEEEEEcHH
Confidence 6533332111 111 15655 4569884 334588877664
No 296
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.48 E-value=3e-06 Score=87.22 Aligned_cols=222 Identities=15% Similarity=0.178 Sum_probs=136.0
Q ss_pred hHHHHHHHHHHHhhhc-ccceeccCccC-cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCC
Q 015609 137 PEIFDIMEKEKQRQFK-GIELIASENFV-CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDS 214 (403)
Q Consensus 137 ~ei~~li~~e~~rq~~-~l~LiaSen~~-~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~ 214 (403)
.+++++|.+|..-... .+.+....++. .+...+.+...+ +++ ||--. .-.+....+|.+|...++.+|+++.
T Consensus 64 d~v~~~i~~~~~ld~~~~~~~vS~~v~~~~~~~~~l~~~~~-~k~---N~l~~--d~fp~~~~~e~~~Vnm~~~L~~~~~ 137 (491)
T KOG1383|consen 64 DAVLELINDELMLDGNPRLGLASGVVYWGEPELDKLIMEAY-NKF---NPLHP--DEFPVVRKLEAECVNMIANLFNAPS 137 (491)
T ss_pred HHHHHHHHHHhccCCCcccCeeeEEEecCCcchhhHHHHHH-hhc---CccCc--cccchhHHHHHHHHHHHHHHhcCCc
Confidence 5899999998665443 34444444442 555555544443 333 22111 1123356788889999999999987
Q ss_pred CCCcceEEeCChHHHHHHHHhhh---ccC--C-C--eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCC
Q 015609 215 DNWGVNVQPYSCTSANFAVYTGL---LLP--G-D--RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTG 286 (403)
Q Consensus 215 ~~~~v~V~~~SGT~An~aal~al---l~p--G-D--~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g 286 (403)
+..| ..+++||++..++.... .+. | + .|++.... |..+ .+.....+ +++..+++++.+.
T Consensus 138 ~~~g--~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v------~~a~---eK~a~yf~--v~l~~V~~~~~~~ 204 (491)
T KOG1383|consen 138 DSCG--CGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNV------HAAF---EKAARYFE--VELREVPLDEGDY 204 (491)
T ss_pred cccC--ccccccchHHHHHHHHHHHHHHhccCCCCccccchHHH------HHHH---HHHHhhEE--EEEEeeeccccce
Confidence 6533 34567888866554432 111 2 1 13333222 2110 01111222 3445666776678
Q ss_pred CCCHHHHHHHhccCCCcEEEEeCCC--CCccccHHHHHHHHHH-cCCEEEEecccccccccc-cccc-CCCC----cccE
Q 015609 287 YIDYEKLEEKAMDYRPKILICGGSS--YPREWDYGRFRQIADK-CGAVLMCDMAHISGLIAA-KELA-SPFD----YCDI 357 (403)
Q Consensus 287 ~ID~d~Le~~i~~~~pklViv~~s~--~g~~~Di~~I~~Iake-~Ga~LivDaAh~~Glia~-g~~~-~p~~----~aDi 357 (403)
.+|+.++.+.+.+ ++.+|+....+ +|..-|+++|.++.-+ +++++++|++ .-|.+.. +... .+|+ ++--
T Consensus 205 ~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~-~GgFi~p~~~~~~~~fdFr~p~V~S 282 (491)
T KOG1383|consen 205 RVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDAC-LGGFINPAGYLNEEEFDFRVPGVTS 282 (491)
T ss_pred EecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeeccc-CccccccccccCccccccCCCCcee
Confidence 9999999999986 46666555444 4577899999999988 9999999997 3344432 3322 2443 4667
Q ss_pred EEEcCcCCCcCCce-EEEEEeCC
Q 015609 358 VTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 358 vt~StHKtL~GP~G-G~I~~~~~ 379 (403)
+++++||+-..|.| ++++++..
T Consensus 283 isa~~HKYGl~~~G~~~vl~r~k 305 (491)
T KOG1383|consen 283 ISADGHKYGLAPAGSSWVLYRNK 305 (491)
T ss_pred EeeccceeeeeecCcEEEEEccc
Confidence 88999998667888 88888765
No 297
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=98.43 E-value=7.2e-06 Score=85.02 Aligned_cols=203 Identities=17% Similarity=0.063 Sum_probs=102.8
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cC
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LP 240 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~p 240 (403)
-+|+|.+|+...+.. +..+..+..+ ++...+ ..+++++++.-..+ ..++.+||++||.++++... ..
T Consensus 60 ~~p~v~~a~~~q~~~-~~~~~~~~~~---~~~~~~----la~~L~~~~~~~~~---~v~f~~SGseA~e~AlklAr~~tg 128 (433)
T PRK08117 60 RHPKVVQAIKEQADK-LMHGPSGVIY---YESILK----LAEELAEITPGGLD---CFFFSNSGAEAIEGALKLAKHVTK 128 (433)
T ss_pred CCHHHHHHHHHHHHh-ccCccccccC---CHHHHH----HHHHHHHhCCCCCC---EEEEeCcHHHHHHHHHHHHHHhcC
Confidence 378888887776643 2112112111 222222 33457777732221 22344699999999998532 22
Q ss_pred CCeEEecCCCCCcccccc-ccCCccchh-hhcc---cceEEeeeecC---CCC------CCCCHHHHHHHhcc----CCC
Q 015609 241 GDRIMGLDSPSGGHLSHG-YHTPGGKKV-SAAS---IFFESFPYKVN---PQT------GYIDYEKLEEKAMD----YRP 302 (403)
Q Consensus 241 GD~VL~~~~ehgghlsh~-~~~~~~~~v-~~~g---~~~~vv~~~vd---~~~------g~ID~d~Le~~i~~----~~p 302 (403)
..+|++....+.|...-. ++....... .... ..+..++++-. +.. ...|++++++++++ .+.
T Consensus 129 r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 208 (433)
T PRK08117 129 RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEV 208 (433)
T ss_pred CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcE
Confidence 356777765443321000 000000000 0000 00111222100 000 01266778877753 234
Q ss_pred cEEEEeC--CCCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCCCcC-CceE
Q 015609 303 KILICGG--SSYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRG-PRGG 372 (403)
Q Consensus 303 klViv~~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKtL~G-P~GG 372 (403)
..||+++ ++.|.+.+ +++++++|++||++||+|.+|. |+...|.. ...++ ..|+ .++-|+|.+ -+.|
T Consensus 209 aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi--~t~sK~lg~G~pig 285 (433)
T PRK08117 209 AAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDI--MTIAKGIASGLPLS 285 (433)
T ss_pred EEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCE--eehhhhccCCCcce
Confidence 5666654 23455566 9999999999999999999998 65333321 11111 1566 467899853 3346
Q ss_pred EEEEeCC
Q 015609 373 IIFFRRG 379 (403)
Q Consensus 373 ~I~~~~~ 379 (403)
+++.+++
T Consensus 286 av~~~~~ 292 (433)
T PRK08117 286 AVVASKE 292 (433)
T ss_pred eEEEcHH
Confidence 6776654
No 298
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.42 E-value=6.2e-06 Score=87.52 Aligned_cols=86 Identities=14% Similarity=0.181 Sum_probs=54.7
Q ss_pred HHHHHHhcc---CCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEeccc-cccccccccccCCCC-cccEEE
Q 015609 291 EKLEEKAMD---YRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAH-ISGLIAAKELASPFD-YCDIVT 359 (403)
Q Consensus 291 d~Le~~i~~---~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh-~~Glia~g~~~~p~~-~aDivt 359 (403)
++|++++.. .+...||+++. +.|.+.+ +++|+++|+++|++||+|.+| ++|-........-++ ..|+++
T Consensus 247 ~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivt 326 (504)
T PLN02760 247 DNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVS 326 (504)
T ss_pred HHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEE
Confidence 457776642 22445666642 3355566 999999999999999999999 576654321111111 278766
Q ss_pred EcCcCCCcC---CceEEEEEeCC
Q 015609 360 STTHKSLRG---PRGGIIFFRRG 379 (403)
Q Consensus 360 ~StHKtL~G---P~GG~I~~~~~ 379 (403)
+ -|.|.| |-|+ ++++++
T Consensus 327 l--gK~lggG~~PigA-v~~~~~ 346 (504)
T PLN02760 327 L--AKALSSAYMPIGA-VLVSPE 346 (504)
T ss_pred e--cccccCCccccce-EeecHH
Confidence 4 699965 6666 555543
No 299
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=98.42 E-value=8.4e-06 Score=83.76 Aligned_cols=189 Identities=20% Similarity=0.186 Sum_probs=106.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-----
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL----- 238 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all----- 238 (403)
+|.|.+|+...+..... .+..+ .++...++ .++++++++.+. .++++||++||.++++...
T Consensus 57 ~p~v~~A~~~~~~~~~~---~~~~~--~~~~~~~l----a~~l~~~~~~~~-----v~~~~sGseA~e~Alk~ar~~~~~ 122 (406)
T PRK12381 57 HPALREALNEQASKFWH---TGNGY--TNEPVLRL----AKKLIDATFADR-----VFFCNSGAEANEAALKLARKYAHD 122 (406)
T ss_pred CHHHHHHHHHHHhhccc---ccCcc--CCHHHHHH----HHHHHhhCCCCe-----EEEcCCcHHHHHHHHHHHHHHHhh
Confidence 78888887776643211 11111 12222233 345777776543 3566799999999998652
Q ss_pred ---cCCCeEEecCCCCCccccccccCCccchhhhcccc-eE----EeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC
Q 015609 239 ---LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-FE----SFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS 310 (403)
Q Consensus 239 ---~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-~~----vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s 310 (403)
..+.+|++....+.|... + .+...+.. +. ..+-.+. .....|++++++++.+ ++++|++++.
T Consensus 123 ~~~~~r~~ii~~~~~yHG~t~-~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~l~~-~~aaviiEPv 192 (406)
T PRK12381 123 RYGSHKSGIVAFKNAFHGRTL-F-------TVSAGGQPKYSQDFAPLPPDIR-HAAYNDLNSASALIDD-QTCAVIVEPI 192 (406)
T ss_pred cCCCCCCeEEEECCCcCCcch-h-------HHhhcCCcccccCCCCCCCCee-EeCCCCHHHHHHhccC-CeeEEEEeCC
Confidence 134678887765544321 1 11222210 00 0000000 0123588999998864 5777887643
Q ss_pred C-C-C----ccccHHHHHHHHHHcCCEEEEecccccccccccccc--CCCC-cccEEEEcCcCCCc-CCceEEEEEeCC
Q 015609 311 S-Y-P----REWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPFD-YCDIVTSTTHKSLR-GPRGGIIFFRRG 379 (403)
Q Consensus 311 ~-~-g----~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~~-~aDivt~StHKtL~-GP~GG~I~~~~~ 379 (403)
. . | ..-.+++|+++|+++|+++|+|.+| .|+...|... ..++ ..|++ ++.|.|. |-+-|+++.+++
T Consensus 193 ~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~~~~~~~~v~pDi~--t~sK~l~gG~~ig~~~~~~~ 268 (406)
T PRK12381 193 QGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDVL--TTAKALGGGFPIGAMLTTEK 268 (406)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcchhhhHhhCCCCCEE--EehhhhhCCCceEEEEEcHH
Confidence 1 1 2 1345899999999999999999999 5553333211 0111 25765 5679984 334477776654
No 300
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=98.42 E-value=6.1e-06 Score=84.95 Aligned_cols=196 Identities=19% Similarity=0.134 Sum_probs=106.4
Q ss_pred cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--c
Q 015609 162 FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--L 239 (403)
Q Consensus 162 ~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~ 239 (403)
+.+|.|.+++...+.+.. .|....+.. . ..++++++++..... .++.+||++|+.++++... .
T Consensus 64 h~~p~v~~ai~~q~~~~~-------~~~~~~~~~--~--~lae~l~~~~~~~~~----v~~~~sGseA~e~Alk~ar~~~ 128 (423)
T TIGR00713 64 HAHPRVVEAVKEALERGT-------SYGAPTEAE--I--LLAKEIISRVPSVEM----VRFVNSGTEATMSAVRLARGYT 128 (423)
T ss_pred CCCHHHHHHHHHHHHhCC-------cCCCCCHHH--H--HHHHHHHHhCCcccE----EEEeCCHHHHHHHHHHHHHHhh
Confidence 447888888877664321 111111111 2 235567777754331 3456689999999987542 3
Q ss_pred CCCeEEecCCCCCcccc-ccccCCcc-chhh--h-ccc--ceEEeeeecCCCCCCCCHHHHHHHhcc--CCCcEEEEeC-
Q 015609 240 PGDRIMGLDSPSGGHLS-HGYHTPGG-KKVS--A-ASI--FFESFPYKVNPQTGYIDYEKLEEKAMD--YRPKILICGG- 309 (403)
Q Consensus 240 pGD~VL~~~~ehgghls-h~~~~~~~-~~v~--~-~g~--~~~vv~~~vd~~~g~ID~d~Le~~i~~--~~pklViv~~- 309 (403)
.+++|++....+.|... .......+ .... . .+. .+....+.+. ..|++++++++.+ .++++|++.+
T Consensus 129 gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~i~~~~~~~aavi~ep~ 204 (423)
T TIGR00713 129 GRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLP----YNDLEALEEVFEEYGEEIAGVIVEPV 204 (423)
T ss_pred CCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeC----CCCHHHHHHHHHHcCCcEEEEEEeCC
Confidence 56889988876644311 00000000 0000 0 000 0000011111 2389999998874 2456777752
Q ss_pred -CCCCcccc----HHHHHHHHHHcCCEEEEecccccccccccc-ccCCCC-cccEEEEcCcCCCc-CCceEEEEEeCC
Q 015609 310 -SSYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKE-LASPFD-YCDIVTSTTHKSLR-GPRGGIIFFRRG 379 (403)
Q Consensus 310 -s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~-~~~p~~-~aDivt~StHKtL~-GP~GG~I~~~~~ 379 (403)
++.|.+.+ +++|+++|+++|+++|+|.+|. |+..... ....+. ..|++ ++.|.+. |-+.|+++++++
T Consensus 205 ~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~r~g~~~~~~~~~~~pDi~--t~sK~l~~G~pig~v~~~~~ 279 (423)
T TIGR00713 205 AGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMT-GFRVALGGAQEYFGVEPDLT--TLGKIIGGGLPVGAFGGRRE 279 (423)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-ccccCcchhHHHhCCCcchh--hhhhhhcCCCceeeeeEHHH
Confidence 34454443 7899999999999999999984 4421111 011111 24655 5789985 335688888764
No 301
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.40 E-value=5.7e-06 Score=86.77 Aligned_cols=192 Identities=16% Similarity=0.086 Sum_probs=100.6
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--c-
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--L- 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~- 239 (403)
.+|+|.+|+...+.... . .++++. ++... + ..+++++++..... ...+.+||++|+.++++... .
T Consensus 99 ~~p~v~~Ai~~ql~~l~---~-~~~~~~-~~~~~---~-lae~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~t~ 166 (459)
T PRK11522 99 RNPVVVSAVQNQLAKQP---L-HSQELL-DPLRA---M-LAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQS 166 (459)
T ss_pred CCHHHHHHHHHHHhhCc---c-cccccC-CHHHH---H-HHHHHHHhCCCCCC---EEEEeCCchHHHHHHHHHHHHHhc
Confidence 37888888777664321 1 112221 22221 2 23456666643322 22445689999999987542 1
Q ss_pred -CC-CeEEecCCCCCccccccccCCccchhhhcccc-eEEeeeecCCC---CCCCCHHHHHHHhcc-----CCCcEEEEe
Q 015609 240 -PG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-FESFPYKVNPQ---TGYIDYEKLEEKAMD-----YRPKILICG 308 (403)
Q Consensus 240 -pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-~~vv~~~vd~~---~g~ID~d~Le~~i~~-----~~pklViv~ 308 (403)
+| .+|++....|.|+.. + .+...+.. +..-+.+..+. -...|.+++++++++ .+...||++
T Consensus 167 ~~gr~~ii~~~~~yHG~t~-~-------~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvE 238 (459)
T PRK11522 167 PRGKFTFIATSGAFHGKSL-G-------ALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILE 238 (459)
T ss_pred cCCCcEEEEecCCCCCCcH-H-------HhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEe
Confidence 22 368877655544321 1 11222110 10000000000 012377888888753 123456665
Q ss_pred C--CCCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCCCcC---CceEEEEE
Q 015609 309 G--SSYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRG---PRGGIIFF 376 (403)
Q Consensus 309 ~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKtL~G---P~GG~I~~ 376 (403)
+ +..|.+.+ +++++++|+++|+++|+|.+|. |+-..|.. ..-++ ..|+++ +-|.|.| |-|+++..
T Consensus 239 pv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt--~gK~lggG~~Pigav~~~ 315 (459)
T PRK11522 239 PIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-GMGRTGKMFACEHENVQPDILC--LAKALGGGVMPIGATIAT 315 (459)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-cCCccchhhhhhccCCCCCEEE--echhhhCCCccceeEEEc
Confidence 3 23355555 8999999999999999999995 43222211 11111 268874 5799875 56666654
Q ss_pred e
Q 015609 377 R 377 (403)
Q Consensus 377 ~ 377 (403)
+
T Consensus 316 ~ 316 (459)
T PRK11522 316 E 316 (459)
T ss_pred H
Confidence 3
No 302
>PLN02672 methionine S-methyltransferase
Probab=98.38 E-value=1e-05 Score=91.99 Aligned_cols=204 Identities=10% Similarity=0.038 Sum_probs=122.4
Q ss_pred cccceeccCcc--CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH-H
Q 015609 152 KGIELIASENF--VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT-S 228 (403)
Q Consensus 152 ~~l~LiaSen~--~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT-~ 228 (403)
..|.|-.+++. +++.|++++...+.. +. . +.|... +-+..++++++.+|.+.... -+|+.++|+ +
T Consensus 698 ~vI~LsinE~d~ppPp~V~eAi~eal~~-~~--~-----s~g~pd---lr~aLa~~la~~~Gv~~d~~-e~IIvt~Gs~e 765 (1082)
T PLN02672 698 SLIHMDVDESFLPVPSAVKASIFESFVR-QN--I-----SESETD---PRPSILQFIKSNYGFPTDSC-TEFVYGDTSLA 765 (1082)
T ss_pred CEEEEeCCCCCCCCCHHHHHHHHHHHhh-cC--C-----CCCChH---HHHHHHHHHHHHhCcCCCCC-CEEEEeCCHHH
Confidence 45777777776 488899998876532 21 1 111111 11223456777788765310 146566554 5
Q ss_pred HHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCC-CCCCCHHHHHHHhccCCC-cEEE
Q 015609 229 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQ-TGYIDYEKLEEKAMDYRP-KILI 306 (403)
Q Consensus 229 An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~-~g~ID~d~Le~~i~~~~p-klVi 306 (403)
++..++.++++|||+|++..+.+.... ..+...|. +++.++.+++ +..+|+++++++++..+. .+++
T Consensus 766 lL~lll~aLl~pGD~VLVp~PtY~~Y~---------~~a~~~Ga--~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L 834 (1082)
T PLN02672 766 LFNKLVLCCVQEGGTLCFPAGSNGTYV---------SAAKFLKA--NFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYI 834 (1082)
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHH---------HHHHHcCC--EEEEEecccccCCCCCHHHHHHHhccCCCCEEEE
Confidence 666788999999999999987764432 12334443 4555565532 457899999999865333 3445
Q ss_pred EeCC-C-CCccc---cHHHHHHHHHHcCCEEEEeccccccccccccc--cCCC-------Cc---c-c-EEEEcCcCCC-
Q 015609 307 CGGS-S-YPREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPF-------DY---C-D-IVTSTTHKSL- 366 (403)
Q Consensus 307 v~~s-~-~g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~-------~~---a-D-ivt~StHKtL- 366 (403)
++++ | +|.++ .+++|.++|+++|++|++|.++.- +...+.. ..++ +. . . +++.|+.|.+
T Consensus 835 ~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsd-L~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~ 913 (1082)
T PLN02672 835 SGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSG-LEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL 913 (1082)
T ss_pred ECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCc-cccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc
Confidence 5543 2 45555 467778889999999999999751 1111100 0001 00 0 2 4566999875
Q ss_pred -cCCceEEEEEeCC
Q 015609 367 -RGPRGGIIFFRRG 379 (403)
Q Consensus 367 -~GP~GG~I~~~~~ 379 (403)
.|-+-|++++++.
T Consensus 914 lpGLRIGylIap~~ 927 (1082)
T PLN02672 914 SGGHEFGFLALNDS 927 (1082)
T ss_pred cHHHHheeEEeCCH
Confidence 3445699998654
No 303
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.36 E-value=6e-06 Score=85.36 Aligned_cols=168 Identities=17% Similarity=0.117 Sum_probs=88.3
Q ss_pred HHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc-------C-CCeEEecCCCCCccccccccCCccchh--h-hccc
Q 015609 204 ERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL-------P-GDRIMGLDSPSGGHLSHGYHTPGGKKV--S-AASI 272 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~~~SGT~An~aal~all~-------p-GD~VL~~~~ehgghlsh~~~~~~~~~v--~-~~g~ 272 (403)
+++++++..... ...+.+||++|+.++++.... + ..+|++....|.|... +.+.-.+... . ..+.
T Consensus 92 ~~l~~~~p~~~~---~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~-~~ls~~~~~~~~~~~~~~ 167 (423)
T PRK05964 92 QRLVALTPGGLD---HVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTI-GTMSVGDRGGMHALYTPL 167 (423)
T ss_pred HHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccH-HHHhcCCCccccccccCc
Confidence 456676642221 134456899999999875421 2 3578888766644321 1000000000 0 0000
Q ss_pred --ceEEeeeecCCCCCCCCHHHHHHHhccC--CCcEEEEeCC---CCCccc----cHHHHHHHHHHcCCEEEEecccccc
Q 015609 273 --FFESFPYKVNPQTGYIDYEKLEEKAMDY--RPKILICGGS---SYPREW----DYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 273 --~~~vv~~~vd~~~g~ID~d~Le~~i~~~--~pklViv~~s---~~g~~~----Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
.+..++++.+ +....+++++++++.+. +...|++.+. ..|... .+++|+++|+++|++|++|.+|. |
T Consensus 168 ~~~~~~~~~~~~-d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g 245 (423)
T PRK05964 168 LFEQVTAPFPPD-GYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIAT-G 245 (423)
T ss_pred CCCCEEeCCCcc-hhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-C
Confidence 1122222211 00112278888888643 2345666541 233333 38999999999999999999994 4
Q ss_pred ccccccc-c-CCCC-cccEEEEcCcCCCcCC--ceEEEEEeCC
Q 015609 342 LIAAKEL-A-SPFD-YCDIVTSTTHKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 342 lia~g~~-~-~p~~-~aDivt~StHKtL~GP--~GG~I~~~~~ 379 (403)
+...|.. . ..++ ..|+++++ |+|.|. +.|+++++++
T Consensus 246 ~gr~G~~~a~~~~~v~pDi~~~~--K~l~gG~~p~~av~~~~~ 286 (423)
T PRK05964 246 FGRTGTLFACEQAGVSPDIMCLS--KGLTGGYLPLAATLCTAE 286 (423)
T ss_pred CCcCcchhHHHhcCCCCCeeeee--hhhhcCcccceEEEEcHH
Confidence 3222211 1 1111 26887654 999654 3466776654
No 304
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.36 E-value=2.3e-05 Score=81.64 Aligned_cols=213 Identities=19% Similarity=0.099 Sum_probs=109.9
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCChHHHHHHHHhhhc--c
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLD-SDNWGVNVQPYSCTSANFAVYTGLL--L 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~-~~~~~v~V~~~SGT~An~aal~all--~ 239 (403)
.+|.|.+|+...+..-. ....++......++.. +++.+++-.+ .+ ..++.+||++||.++++... .
T Consensus 73 ~hP~Vv~Av~~q~~~~~---h~~~~~~~~e~~v~~a-----e~L~~~~p~~~~~---~~~f~~sGaeA~E~AiKiAr~~T 141 (447)
T COG0160 73 NHPRVVEAVKRQLAKLN---HTHTRDLYYEPYVELA-----EKLTALAPGSGLK---KVFFGNSGAEAVEAAIKIARAYT 141 (447)
T ss_pred CCHHHHHHHHHHHHHhh---cccCCcccchhHHHHH-----HHHHHhCCcccCC---eEEecCCcHHHHHHHHHHHHHHh
Confidence 38999999887665421 2233333322233322 3456666553 22 23455689999999997552 2
Q ss_pred CCCeEEecCCCCCccccccccCCccchhhh-c--c---cceEEeeeecCCCC---------CCCCHHHHHHHhccC----
Q 015609 240 PGDRIMGLDSPSGGHLSHGYHTPGGKKVSA-A--S---IFFESFPYKVNPQT---------GYIDYEKLEEKAMDY---- 300 (403)
Q Consensus 240 pGD~VL~~~~ehgghlsh~~~~~~~~~v~~-~--g---~~~~vv~~~vd~~~---------g~ID~d~Le~~i~~~---- 300 (403)
.+..||+....+.|.. ++.+.-++..... . + -.+..++|+-..-. +.-..+.++..+...
T Consensus 142 gr~~viaf~~afHG~T-~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~ 220 (447)
T COG0160 142 GRPGVIAFDGAFHGRT-LGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGP 220 (447)
T ss_pred CCCcEEEECCcccccc-hhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCC
Confidence 3456888776665542 2211101111111 0 0 01233444321100 111234455544332
Q ss_pred -CCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccccCCCC----cccEEEEcCcCCCcC-
Q 015609 301 -RPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD----YCDIVTSTTHKSLRG- 368 (403)
Q Consensus 301 -~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~----~aDivt~StHKtL~G- 368 (403)
++..+|+++- .-|.+.+ +++++++|+++|++||+|..|+- +--.|.+ -.++ ..|++|++ |.|+|
T Consensus 221 ~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG-~GRTG~~-fa~E~~gv~PDivt~a--K~ig~G 296 (447)
T COG0160 221 EEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTG-FGRTGKM-FAFEHFGVEPDIVTLA--KSLGGG 296 (447)
T ss_pred CceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC-CCccccc-hhhhhcCCCCCEEEec--ccccCC
Confidence 3456677642 3333222 78999999999999999999862 2112211 1122 26898855 88865
Q ss_pred CceEEEEEeCCCCCcccCCCcccCCc
Q 015609 369 PRGGIIFFRRGKKPRKQGIPLNHGDV 394 (403)
Q Consensus 369 P~GG~I~~~~~~~~~~~~~p~~qGg~ 394 (403)
.+-+.++++.+. .. .+|+.+++|
T Consensus 297 ~Pl~avv~r~ei--~~-~~~g~~~~T 319 (447)
T COG0160 297 LPLSAVVGRAEI--MD-WPPGGHGGT 319 (447)
T ss_pred CceeEEeccHHh--cc-cCCcccCCC
Confidence 333667766652 22 455555544
No 305
>PLN02397 aspartate transaminase
Probab=98.36 E-value=2.6e-06 Score=88.07 Aligned_cols=138 Identities=17% Similarity=0.208 Sum_probs=84.4
Q ss_pred hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec-CCCCCCCCHHHHHHHhccC--CC
Q 015609 226 CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV-NPQTGYIDYEKLEEKAMDY--RP 302 (403)
Q Consensus 226 GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v-d~~~g~ID~d~Le~~i~~~--~p 302 (403)
|+.++...+..++.|||+|++.++.|.++.. .+...|. ++++++. ++++..+|++.+++.+++. ++
T Consensus 127 Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~---------~~~~~g~--~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~ 195 (423)
T PLN02397 127 GSLRLGAEFLARFYPGSTIYIPNPTWGNHHN---------IFRDAGV--PVRTYRYYDPKTRGLDFDGLLEDLKAAPDGS 195 (423)
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCchhHHH---------HHHHcCC--eEEEeecccCcCCccCHHHHHHHHHhCCCCC
Confidence 3444555556666799999999987765531 2334443 4455544 2234579999998887642 34
Q ss_pred cEEEEeCCCC--Cccc---cHHHHHHHHHHcCCEEEEecccccccccccc---ccC--CCC-ccc--EEEEcCcCCCc--
Q 015609 303 KILICGGSSY--PREW---DYGRFRQIADKCGAVLMCDMAHISGLIAAKE---LAS--PFD-YCD--IVTSTTHKSLR-- 367 (403)
Q Consensus 303 klViv~~s~~--g~~~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~---~~~--p~~-~aD--ivt~StHKtL~-- 367 (403)
+++++...++ |... .+++|.++|+++|+++++|.+. .++...+. .+. .+. .-+ +++.|+.|++.
T Consensus 196 ~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y-~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~ 274 (423)
T PLN02397 196 FVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAY-QGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLY 274 (423)
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccc-CCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCc
Confidence 5566554444 4454 4677788899999999999983 33332210 000 111 112 56789999974
Q ss_pred CCceEEEE
Q 015609 368 GPRGGIIF 375 (403)
Q Consensus 368 GP~GG~I~ 375 (403)
|-|-|+++
T Consensus 275 G~RvG~~v 282 (423)
T PLN02397 275 GERVGALS 282 (423)
T ss_pred cccceEEE
Confidence 55658875
No 306
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.36 E-value=1.4e-05 Score=83.43 Aligned_cols=193 Identities=15% Similarity=0.067 Sum_probs=101.5
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc---
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL--- 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~--- 239 (403)
.+|.|.+|+...+.... . ..+++. ++.. .+ ..+++++++..... ..++.+||++||.++++....
T Consensus 92 ~hp~v~~Av~~ql~~l~---~-~~~~~~-~~~~---~~-lAe~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~t~ 159 (442)
T TIGR03372 92 RNPNVIAAVENQLAKQP---L-HSQELL-DPLR---AL-LAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQS 159 (442)
T ss_pred CCHHHHHHHHHHHHhCC---C-cccccC-CHHH---HH-HHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHHHh
Confidence 37888888877664321 1 112221 2222 11 23456677654322 234456899999999875421
Q ss_pred --CCCeEEecCCCCCccccccccCCccchhhhcccc-eEEeeeecCCC---CCCCCHHHHHHHhcc-----CCCcEEEEe
Q 015609 240 --PGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-FESFPYKVNPQ---TGYIDYEKLEEKAMD-----YRPKILICG 308 (403)
Q Consensus 240 --pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-~~vv~~~vd~~---~g~ID~d~Le~~i~~-----~~pklViv~ 308 (403)
...+|++....+.|... + .+...+.. +.....+..+. --.-|.+.+++.+++ .+...||++
T Consensus 160 ~~gr~~ii~~~~~yHG~t~-~-------~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvE 231 (442)
T TIGR03372 160 PRGKFTFIAASGAFHGKSL-G-------ALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILE 231 (442)
T ss_pred hcCCcEEEEECCCccCCCH-H-------HhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 23568887766544421 1 11111110 00000000000 012367777777642 234556665
Q ss_pred C--CCCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCCCcC---CceEEEEE
Q 015609 309 G--SSYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRG---PRGGIIFF 376 (403)
Q Consensus 309 ~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKtL~G---P~GG~I~~ 376 (403)
+ +..|...+ +++++++|+++|+++|+|.+|. |+-..|.. ..-++ ..|+++ +-|.|.| |-|+ +++
T Consensus 232 pv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt--~gK~lg~G~~Piga-vv~ 307 (442)
T TIGR03372 232 PIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-GMGRTGKMFACEHEGVQPDILC--LAKALGGGVMPIGA-TIA 307 (442)
T ss_pred CccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-CCCccccchhhhhcCCCCCeee--ehhhhcCCcccceE-EEe
Confidence 3 23345556 8999999999999999999994 43122221 11112 268877 6799864 4444 445
Q ss_pred eCC
Q 015609 377 RRG 379 (403)
Q Consensus 377 ~~~ 379 (403)
+++
T Consensus 308 ~~~ 310 (442)
T TIGR03372 308 TEA 310 (442)
T ss_pred cHH
Confidence 543
No 307
>PRK08637 hypothetical protein; Provisional
Probab=98.35 E-value=1e-05 Score=82.39 Aligned_cols=145 Identities=20% Similarity=0.129 Sum_probs=87.0
Q ss_pred EEeC-ChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhh-hcccceEEeeeecCCCCCCCCHHHHHHHhc
Q 015609 221 VQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVS-AASIFFESFPYKVNPQTGYIDYEKLEEKAM 298 (403)
Q Consensus 221 V~~~-SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~-~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~ 298 (403)
|+.+ ++++|+..++.++++|||+|++..+.+..... .+. ..| .+++.++...+++.+|+++++++++
T Consensus 72 I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---------~~~~~~g--~~vv~v~~~~~~~~~d~~~l~~~~~ 140 (388)
T PRK08637 72 PIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKL---------TFNTRRG--AEIVTYPIFDEDGGFDTDALKEALQ 140 (388)
T ss_pred eeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHH---------HHHHhcC--CEEEEecccCCCCcCCHHHHHHHHH
Confidence 4455 45779999999999999999999877644321 111 223 3556666522245689999998876
Q ss_pred --cCCCc-EEEEeCCCC--Ccccc---HHHHHHHHHH-----cCCEEEEecccccccccccc-ccC---CC-C-cccE--
Q 015609 299 --DYRPK-ILICGGSSY--PREWD---YGRFRQIADK-----CGAVLMCDMAHISGLIAAKE-LAS---PF-D-YCDI-- 357 (403)
Q Consensus 299 --~~~pk-lViv~~s~~--g~~~D---i~~I~~Iake-----~Ga~LivDaAh~~Glia~g~-~~~---p~-~-~aDi-- 357 (403)
..+++ ++++..+++ |...+ +++|.++|++ +++++++|.+.. .+...+. .+. .+ + +-.+
T Consensus 141 ~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~-~l~~~~~~~~~~~~~~~~~~~~vi~ 219 (388)
T PRK08637 141 AAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYF-GLFYEDSYKESLFAALANLHSNILA 219 (388)
T ss_pred hhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccch-hcccCCccchhhHHHhhcccccceE
Confidence 22334 455543344 45554 5666676664 899999999854 2222111 110 11 1 1122
Q ss_pred E-EEcCcCCC--cCCceEEEEEe
Q 015609 358 V-TSTTHKSL--RGPRGGIIFFR 377 (403)
Q Consensus 358 v-t~StHKtL--~GP~GG~I~~~ 377 (403)
+ +.|+.|.+ .|-|-|++++.
T Consensus 220 i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 220 VKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred EEeccccccCCCcccceEEEEEc
Confidence 2 34889964 55567998864
No 308
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=98.32 E-value=2.1e-05 Score=80.60 Aligned_cols=151 Identities=17% Similarity=0.109 Sum_probs=86.1
Q ss_pred eEEeCC-hHHHHHHHHhhhcc-----CCCeEEe-cCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHH
Q 015609 220 NVQPYS-CTSANFAVYTGLLL-----PGDRIMG-LDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEK 292 (403)
Q Consensus 220 ~V~~~S-GT~An~aal~all~-----pGD~VL~-~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~ 292 (403)
+|+.++ +++|+.+++.++++ +||+|++ ..+.+.+........ . ...+....+.+++.+.....+|+++
T Consensus 99 ~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~d~~~ 173 (416)
T PRK09440 99 NIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEE----D-LFVSYRPNIELLPEGQFKYHVDFEH 173 (416)
T ss_pred hEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhcc----C-ceeecccccccccccccccCCCHHH
Confidence 466665 45688888888875 6899999 577765543211000 0 0011111222222110023589999
Q ss_pred HHHHhccCCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccC--CC-CcccEEEEcCcC
Q 015609 293 LEEKAMDYRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELAS--PF-DYCDIVTSTTHK 364 (403)
Q Consensus 293 Le~~i~~~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~--p~-~~aDivt~StHK 364 (403)
|+ + ..+++++++..+++ |.+.+ +++|.++|+++++++++|.++..-. +...... +. ..-=+++.|+.|
T Consensus 174 l~--~-~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~-~~~~~~~~~~~~~~~vI~~~SfSK 249 (416)
T PRK09440 174 LH--I-DEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPF-PGIIFSEATPLWNPNIILCMSLSK 249 (416)
T ss_pred cc--c-CCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccC-CCcchhhcCccccCCeEEEecccc
Confidence 87 3 33567777665454 45555 6777888999999999999975311 0000000 10 011166789999
Q ss_pred C-CcCCceEEEEEeCC
Q 015609 365 S-LRGPRGGIIFFRRG 379 (403)
Q Consensus 365 t-L~GP~GG~I~~~~~ 379 (403)
+ +.|-|-|+++.+++
T Consensus 250 ~~~pGlRiG~~i~~~~ 265 (416)
T PRK09440 250 LGLPGVRCGIVIADEE 265 (416)
T ss_pred cCCCcceEEEEeCCHH
Confidence 6 34556699887653
No 309
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.31 E-value=3.4e-05 Score=80.04 Aligned_cols=211 Identities=19% Similarity=0.213 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHhhhcccceeccCcc---CcHHHHHHHHHHhhhcCCCCCCCCcc-ccch-HHHHHHHHHHHHHHHHHcCC
Q 015609 138 EIFDIMEKEKQRQFKGIELIASENF---VCRAVMEALGSHLTNKYSEGYPGARY-YTGN-QYIDQIENLCFERALKAFDL 212 (403)
Q Consensus 138 ei~~li~~e~~rq~~~l~LiaSen~---~~p~V~eA~~s~l~~~y~eG~pgsr~-~~G~-~~~~~lE~~arerla~lfg~ 212 (403)
|+...++.=..++.....+++.-.| +++.|.+.+.+.- ..|..-.|+... .+|. +.+-+ -+..++++.|.
T Consensus 51 e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~~-ef~TaYtPYQpEisQG~Lq~lfe----~Qs~i~eLTGm 125 (429)
T PF02347_consen 51 ELLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSRP-EFYTAYTPYQPEISQGRLQALFE----YQSMICELTGM 125 (429)
T ss_dssp HHHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCCH-HCCCS-STTSGGGBHHHHHHHHH----HHHHHHHHHTS
T ss_pred HHHHHHHHHHhcCCCCCccccccccCceeChhhcCccccCh-hhhccCCCCCcHHHHHHHHHHHH----HHHHHHHhhCC
Confidence 4555444444444445566655433 3555555233221 112111233321 1222 22222 35679999999
Q ss_pred CCCCCcceEEeC-ChHHHHHHHHhhh---ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCC
Q 015609 213 DSDNWGVNVQPY-SCTSANFAVYTGL---LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYI 288 (403)
Q Consensus 213 ~~~~~~v~V~~~-SGT~An~aal~al---l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~I 288 (403)
+- +|.... .+|.+-.+++++. -+.+++|+++...|+.+... . +. ...+.+++++.++++. .+..
T Consensus 126 dv----aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v---~---~t-~a~~~g~~iv~~~~~~-~~~~ 193 (429)
T PF02347_consen 126 DV----ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAV---L---RT-YAAPLGIEIVEVPLDE-DGTT 193 (429)
T ss_dssp SE----E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHH---H---HH-HCCHCCEEEEEE-BBT-TCSB
T ss_pred Cc----cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHH---H---HH-hhhhCCeEEEEecccc-cCCc
Confidence 86 344443 3455444554443 23346899998776544320 0 00 1123456777777764 4566
Q ss_pred CHHHHHHHhccCCCcEEEEeCC-CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEEEcCcCCC
Q 015609 289 DYEKLEEKAMDYRPKILICGGS-SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSL 366 (403)
Q Consensus 289 D~d~Le~~i~~~~pklViv~~s-~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt~StHKtL 366 (403)
| ..++..|++..+ .+|.+-|+++|.+++|++|+++++ ++.-..+ +.+..|-+ ++|+++.. ||+|
T Consensus 194 d---------~~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL---~~l~~Pge~GADI~vg~-~Q~f 259 (429)
T PF02347_consen 194 D---------DDDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GADPNAL---GGLKSPGEYGADIVVGE-HQTF 259 (429)
T ss_dssp ----------STTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGGCCGC---CTC--GGGGT-SEEEEC-CTTT
T ss_pred c---------ccCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecCHHHH---hCcCChhhcCccEEeeC-CCCC
Confidence 6 234556666544 568888999999999999999988 6654433 33445555 49999666 8887
Q ss_pred c------CCceEEEEEeCC
Q 015609 367 R------GPRGGIIFFRRG 379 (403)
Q Consensus 367 ~------GP~GG~I~~~~~ 379 (403)
+ ||..|++.+++.
T Consensus 260 g~p~~~GGP~~G~~a~~~~ 278 (429)
T PF02347_consen 260 GIPMGFGGPGAGFFAVRED 278 (429)
T ss_dssp T---CCC-S--EEEEE-GG
T ss_pred cccCCCCCCCeeeEEEhhh
Confidence 4 455589988876
No 310
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.29 E-value=2.1e-05 Score=82.07 Aligned_cols=86 Identities=27% Similarity=0.269 Sum_probs=54.0
Q ss_pred HHHHHHHhccC---CCcEEEEeC--CCCCcccc----HHHHHHHHHHcCCEEEEeccc-cccccccccccCCCC-cccEE
Q 015609 290 YEKLEEKAMDY---RPKILICGG--SSYPREWD----YGRFRQIADKCGAVLMCDMAH-ISGLIAAKELASPFD-YCDIV 358 (403)
Q Consensus 290 ~d~Le~~i~~~---~pklViv~~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh-~~Glia~g~~~~p~~-~aDiv 358 (403)
.++++++++.. +...|++++ +..|...+ +++|+++|+++|++||+|.+| ++|-........-++ ..|++
T Consensus 201 ~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv 280 (442)
T PRK13360 201 ADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLL 280 (442)
T ss_pred HHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCcee
Confidence 46788887632 234566653 23355556 999999999999999999999 455433221111112 26877
Q ss_pred EEcCcCCCcC---CceEEEEEeC
Q 015609 359 TSTTHKSLRG---PRGGIIFFRR 378 (403)
Q Consensus 359 t~StHKtL~G---P~GG~I~~~~ 378 (403)
+ +-|.|.| |-|+ +++++
T Consensus 281 t--~gK~l~gG~~P~ga-v~~~~ 300 (442)
T PRK13360 281 T--CAKGLTNGAIPMGA-VFVSS 300 (442)
T ss_pred e--eeeccccCccceEE-EEEcH
Confidence 5 5799864 5555 44443
No 311
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=98.27 E-value=1.5e-05 Score=79.44 Aligned_cols=145 Identities=17% Similarity=0.125 Sum_probs=87.3
Q ss_pred HHHHHHHcCCCCCCCcceEEeCCh-HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec
Q 015609 203 FERALKAFDLDSDNWGVNVQPYSC-TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV 281 (403)
Q Consensus 203 rerla~lfg~~~~~~~v~V~~~SG-T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v 281 (403)
|+.+++.++.+. |+.++| ++|+.+++ .+.+||+|++..+.+.+.. ..+...| .+++.+++
T Consensus 55 r~~ia~~~~~~~------I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~---------~~~~~~g--~~~~~v~~ 115 (330)
T PRK05664 55 EAAARAYYGAPQ------LLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHA---------HAWRRAG--HQVRELDE 115 (330)
T ss_pred HHHHHHHhCCCC------EEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHH---------HHHHHcC--CeEEEech
Confidence 566888888753 555555 56776654 4589999999987764432 1223334 34444432
Q ss_pred CCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cc
Q 015609 282 NPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YC 355 (403)
Q Consensus 282 d~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~a 355 (403)
+++++++. ++|++++..+++ |...+ +++|.++|+++|+++++|.+..-. .+.... ..+. +-
T Consensus 116 ---------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~-~~~~s~-~~~~~~~ 182 (330)
T PRK05664 116 ---------AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDN-TPQHSL-AACAHRP 182 (330)
T ss_pred ---------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccC-CCcccc-cccccCC
Confidence 35666654 466665544444 55555 555566678899999999986432 111100 0111 11
Q ss_pred c-EEEEcCcCCC--cCCceEEEEEeCC
Q 015609 356 D-IVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 356 D-ivt~StHKtL--~GP~GG~I~~~~~ 379 (403)
. +++.|+.|++ .|-|-|+++.+++
T Consensus 183 ~vi~~~SfSK~~gl~GlRiG~~v~~~~ 209 (330)
T PRK05664 183 GLIVLRSFGKFFGLAGARLGFVLAEPA 209 (330)
T ss_pred CEEEEeeccccccCCCcceEEEEeCHH
Confidence 2 6788999987 3445599998653
No 312
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.27 E-value=2.8e-05 Score=80.54 Aligned_cols=152 Identities=18% Similarity=0.083 Sum_probs=80.5
Q ss_pred CChHHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchh--hhcc---cceEEeeeecCCCCCCCCHHHHHHH
Q 015609 224 YSCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKV--SAAS---IFFESFPYKVNPQTGYIDYEKLEEK 296 (403)
Q Consensus 224 ~SGT~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v--~~~g---~~~~vv~~~vd~~~g~ID~d~Le~~ 296 (403)
+||++|+.++++... ....+|++....|.|... +.+...+... ...+ ..+..++++-......-|+++++++
T Consensus 110 ~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~-~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 188 (425)
T PRK09264 110 PTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTL-GSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKL 188 (425)
T ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccH-HHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHH
Confidence 599999999987552 234578887765544321 1000000000 0000 0112222221000011367888888
Q ss_pred hccC-----CCcEEEEeCC--CCCcc----ccHHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcC
Q 015609 297 AMDY-----RPKILICGGS--SYPRE----WDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTT 362 (403)
Q Consensus 297 i~~~-----~pklViv~~s--~~g~~----~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~St 362 (403)
+.+. +...||+++- +.|.+ ..+++|+++|+++|+++|+|.+|+ |+.-.|.. ...++ ..|+++++
T Consensus 189 l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~~~~~~~v~PDi~t~~- 266 (425)
T PRK09264 189 LEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-GCGRTGTFFSFERAGITPDIVTLS- 266 (425)
T ss_pred HHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-CCccccHHHHHhhcCCCCCEEEec-
Confidence 8642 2345666532 23332 258999999999999999999996 33212211 01111 26888765
Q ss_pred cCCCcC--CceEEEEEeCC
Q 015609 363 HKSLRG--PRGGIIFFRRG 379 (403)
Q Consensus 363 HKtL~G--P~GG~I~~~~~ 379 (403)
|.|.+ -+-|+++++++
T Consensus 267 -K~l~~~G~pigav~~~~~ 284 (425)
T PRK09264 267 -KSISGYGLPMALVLIKPE 284 (425)
T ss_pred -cccCCCccceEEEEEchh
Confidence 98843 22377777654
No 313
>PRK06541 hypothetical protein; Provisional
Probab=98.27 E-value=1.7e-05 Score=83.30 Aligned_cols=84 Identities=20% Similarity=0.205 Sum_probs=53.9
Q ss_pred HHHHHHhccC---CCcEEEEeC--CCCCcccc----HHHHHHHHHHcCCEEEEeccc-cccccccccccCCCC-cccEEE
Q 015609 291 EKLEEKAMDY---RPKILICGG--SSYPREWD----YGRFRQIADKCGAVLMCDMAH-ISGLIAAKELASPFD-YCDIVT 359 (403)
Q Consensus 291 d~Le~~i~~~---~pklViv~~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh-~~Glia~g~~~~p~~-~aDivt 359 (403)
+.+++++... +..+|++++ +..|.+.+ +++|+++|+++|++||+|.+| ++|-........-++ ..|+++
T Consensus 208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt 287 (460)
T PRK06541 208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT 287 (460)
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE
Confidence 6778877632 234566654 23355556 999999999999999999999 566443221111111 268876
Q ss_pred EcCcCCCcC---CceEEEEE
Q 015609 360 STTHKSLRG---PRGGIIFF 376 (403)
Q Consensus 360 ~StHKtL~G---P~GG~I~~ 376 (403)
+-|.|.| |-|+++..
T Consensus 288 --~gK~l~~G~~pigav~~~ 305 (460)
T PRK06541 288 --CAKGITSGYSPLGAMIAS 305 (460)
T ss_pred --ecccccCCccceeEEEEc
Confidence 6799875 55655553
No 314
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.27 E-value=1.3e-05 Score=82.99 Aligned_cols=193 Identities=18% Similarity=0.112 Sum_probs=104.5
Q ss_pred cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHc-CCCCCCCcceEEeCChHHHHHHHHhhhcc-
Q 015609 162 FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAF-DLDSDNWGVNVQPYSCTSANFAVYTGLLL- 239 (403)
Q Consensus 162 ~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lf-g~~~~~~~v~V~~~SGT~An~aal~all~- 239 (403)
+.+|+|.+++...+.... . .++ ..+.. .+ ..+++++++ +.+. .++++||++||.++++....
T Consensus 66 h~~p~i~~a~~~~~~~~~--~----~~~-~~~~~---~~-la~~L~~~~~~~~~-----v~~~~sGseA~e~Aik~a~~~ 129 (426)
T PRK00062 66 HAHPEVVEAVIEAAEKGL--S----FGA-PTELE---VE-LAELVIELVPSIEM-----VRMVNSGTEATMSAIRLARGY 129 (426)
T ss_pred CCCHHHHHHHHHHHHhCC--c----CCC-CCHHH---HH-HHHHHHHhCCCCCE-----EEEecCHHHHHHHHHHHHHHH
Confidence 457888888877765421 1 111 11111 12 344566665 3322 34567899999999987643
Q ss_pred -CCCeEEecCCCCCccccccccCCccc-hh----hhcccceE-E--eeeecCCCCCCCCHHHHHHHhccC--CCcEEEEe
Q 015609 240 -PGDRIMGLDSPSGGHLSHGYHTPGGK-KV----SAASIFFE-S--FPYKVNPQTGYIDYEKLEEKAMDY--RPKILICG 308 (403)
Q Consensus 240 -pGD~VL~~~~ehgghlsh~~~~~~~~-~v----~~~g~~~~-v--v~~~vd~~~g~ID~d~Le~~i~~~--~pklViv~ 308 (403)
.+++|++....+.|+.. +.....+. .. ...+.... + ..+.+ ...|++++++.+... +...|+++
T Consensus 130 ~g~~~ii~~~~~yHG~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~~~l~~~i~~~~~~~aaiivE 204 (426)
T PRK00062 130 TGRDKIIKFEGCYHGHAD-SLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA----PYNDLEAVEELFEEYGDEIAAVIVE 204 (426)
T ss_pred hCCCeEEEEcCccCCchh-hhhhccCccccccCCCCCCCCCcccccceEEc----CCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 36788888776655420 00000000 00 00000000 0 01111 124789999888642 34566776
Q ss_pred C--CCCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCCCcC-CceEEEEEeC
Q 015609 309 G--SSYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRG-PRGGIIFFRR 378 (403)
Q Consensus 309 ~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKtL~G-P~GG~I~~~~ 378 (403)
+ ++.|...+ +++|.++|+++|+++++|.+|. |+ ..+.. ...++ ..|++ ++.|.|.+ -+.|++++++
T Consensus 205 pv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~-r~g~~~~~~~~~~~pDi~--~~gK~l~~G~p~ga~~~~~ 280 (426)
T PRK00062 205 PVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GF-RVALGGAQGYYGVTPDLT--TLGKIIGGGLPVGAFGGRR 280 (426)
T ss_pred CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-cc-ccCCccHHHHhCCCcchH--hhhhHhhCCCcceeeeEHH
Confidence 3 34455566 8999999999999999999996 55 22211 11111 14654 56799864 2245566665
Q ss_pred C
Q 015609 379 G 379 (403)
Q Consensus 379 ~ 379 (403)
+
T Consensus 281 ~ 281 (426)
T PRK00062 281 E 281 (426)
T ss_pred H
Confidence 3
No 315
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=98.23 E-value=2.4e-05 Score=78.24 Aligned_cols=189 Identities=15% Similarity=0.117 Sum_probs=112.4
Q ss_pred hcccceeccCccC--cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcC---CCCCCCcceEEeCC
Q 015609 151 FKGIELIASENFV--CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFD---LDSDNWGVNVQPYS 225 (403)
Q Consensus 151 ~~~l~LiaSen~~--~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg---~~~~~~~v~V~~~S 225 (403)
...|.|-.++|.. ++.+++++...+.... ..+|+.. ...+ .|+.++++++ .+++ +|..++
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~-----~~~Y~~~--~~~~----Lr~aia~~~~~~~~~~~----~i~it~ 83 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLNSDT-----LRIYYDS--PDEE----LIEKILSYLDTDFLSKN----NVSVGN 83 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhhhhh-----hhcCCCC--ChHH----HHHHHHHHhCCCCCCcc----eEEEcC
Confidence 4557777666664 7888888876543211 0112111 1112 3556788887 5554 466665
Q ss_pred -hHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCCCcE
Q 015609 226 -CTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKI 304 (403)
Q Consensus 226 -GT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pkl 304 (403)
+++++.+++.++ |+|++..+.|.+.. ..+...|. +++.++.++ .+.++... +. ++++
T Consensus 84 Ga~~~i~~~~~~~----d~v~v~~P~y~~~~---------~~~~~~g~--~~~~v~~~~-~~~~~~~~----~~--~~~~ 141 (335)
T PRK14808 84 GADEIIYVMMLMF----DRSVFFPPTYSCYR---------IFAKAVGA--KFLEVPLTK-DLRIPEVN----VG--EGDV 141 (335)
T ss_pred CHHHHHHHHHHHh----CcEEECCCCHHHHH---------HHHHHcCC--eEEEecCCC-cCCCChhH----cc--CCCE
Confidence 567888888776 77888877654332 12334443 455666653 34454322 22 3578
Q ss_pred EEEeCCCC--CccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-ccc-EEEEcCcCCCc--CCceEEEEEeC
Q 015609 305 LICGGSSY--PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCD-IVTSTTHKSLR--GPRGGIIFFRR 378 (403)
Q Consensus 305 Viv~~s~~--g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aD-ivt~StHKtL~--GP~GG~I~~~~ 378 (403)
|++...++ |...+.+++.+|+ ++++++++|.+..- +.. ......+. ... +++.|+.|+++ |-|-|++++++
T Consensus 142 i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~-f~~-~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~ 218 (335)
T PRK14808 142 VFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYE-FHG-ESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE 218 (335)
T ss_pred EEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhh-hcC-CchHHHHHhCCCEEEEEechhhccCcccceEEEEeCH
Confidence 77765555 6788999999998 57999999998642 211 11111111 112 66789999874 44559999876
Q ss_pred C
Q 015609 379 G 379 (403)
Q Consensus 379 ~ 379 (403)
+
T Consensus 219 ~ 219 (335)
T PRK14808 219 K 219 (335)
T ss_pred H
Confidence 4
No 316
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=98.23 E-value=5.3e-05 Score=78.28 Aligned_cols=146 Identities=15% Similarity=0.079 Sum_probs=79.9
Q ss_pred CChHHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchhhhccc------------ceEEeeeecCCCCCCCC
Q 015609 224 YSCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI------------FFESFPYKVNPQTGYID 289 (403)
Q Consensus 224 ~SGT~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~------------~~~vv~~~vd~~~g~ID 289 (403)
+||++|+.++++... ....+|++....|.|... + .++..+. .+..++++--.....-+
T Consensus 106 ~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~-~-------als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 177 (412)
T TIGR02407 106 PTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTL-G-------SLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDT 177 (412)
T ss_pred CCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchH-H-------HHHhcCCcccccCCCCCCCCeEECCCCCccccchhH
Confidence 699999999987653 234678887766544321 1 1111110 11112221000000134
Q ss_pred HHHHHHHhccC-----CCcEEEEeCC--CCCc----cccHHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-ccc
Q 015609 290 YEKLEEKAMDY-----RPKILICGGS--SYPR----EWDYGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCD 356 (403)
Q Consensus 290 ~d~Le~~i~~~-----~pklViv~~s--~~g~----~~Di~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aD 356 (403)
++.+++++.++ ++..|++.+. +.|. ..-+++|+++|+++|+++|+|.+|. +|-..........+ ..|
T Consensus 178 ~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD 257 (412)
T TIGR02407 178 IAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD 257 (412)
T ss_pred HHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC
Confidence 67788888642 2456666532 2333 2237899999999999999999986 33221111111112 268
Q ss_pred EEEEcCcCCCc--CCceEEEEEeCC
Q 015609 357 IVTSTTHKSLR--GPRGGIIFFRRG 379 (403)
Q Consensus 357 ivt~StHKtL~--GP~GG~I~~~~~ 379 (403)
+++++ |+|. |-+-|+++.+++
T Consensus 258 i~~~~--K~lg~~G~pigav~~~~~ 280 (412)
T TIGR02407 258 IVCLS--KSISGYGLPLALTLIKPE 280 (412)
T ss_pred EEEec--hhccCCccceeEEEEchh
Confidence 88765 9985 323467777654
No 317
>PLN00144 acetylornithine transaminase
Probab=98.23 E-value=2.8e-05 Score=79.48 Aligned_cols=192 Identities=17% Similarity=0.094 Sum_probs=103.0
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc---c
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL---L 239 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all---~ 239 (403)
-+|+|.+++...+... .+.+..++ ++.. + + ..++++++++.+. ..+.+||++|+.++++... .
T Consensus 32 ~~p~v~~ai~~q~~~~---~~~~~~~~--~~~~--~-~-la~~l~~~~~~~~-----v~f~~sGseA~e~AlklAr~~~~ 97 (382)
T PLN00144 32 GDPDWVKAVAEQAGTL---AHVSNVYH--TIPQ--V-E-LAKRLVASSFADR-----VFFCNSGTEANEAAIKFARKYQR 97 (382)
T ss_pred CCHHHHHHHHHHHHhc---CCcccccc--CHHH--H-H-HHHHHHhcCCCCe-----EEEeCCcHHHHHHHHHHHHHHHh
Confidence 3788888888776532 12221111 2211 1 1 2334556655432 3455689999999987542 1
Q ss_pred ------C------CCeEEecCCCCCccccccccCCccchhhhcccc-eEEeeeecCCC---CCCCCHHHHHHHhccCCCc
Q 015609 240 ------P------GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF-FESFPYKVNPQ---TGYIDYEKLEEKAMDYRPK 303 (403)
Q Consensus 240 ------p------GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~-~~vv~~~vd~~---~g~ID~d~Le~~i~~~~pk 303 (403)
+ ..+|+.....+.|... + .++..+.. +...+.+..+. -...|++.+++++...+++
T Consensus 98 ~~~~~~~~~~~~~r~~ii~~~~~yHG~t~-~-------~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~a 169 (382)
T PLN00144 98 VRAPDKKDPAASSATEFVSFSNSFHGRTL-G-------ALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTA 169 (382)
T ss_pred ccCCCCccccccccceEEEECCCcccccH-H-------HHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeE
Confidence 1 2468887766544310 0 11111110 00000000000 0123789999888655677
Q ss_pred EEEEeCCCC-Cc---ccc--HHHHHHHHHHcCCEEEEeccccccccccccc-cC-CCC-cccEEEEcCcCCCc-CCceEE
Q 015609 304 ILICGGSSY-PR---EWD--YGRFRQIADKCGAVLMCDMAHISGLIAAKEL-AS-PFD-YCDIVTSTTHKSLR-GPRGGI 373 (403)
Q Consensus 304 lViv~~s~~-g~---~~D--i~~I~~Iake~Ga~LivDaAh~~Glia~g~~-~~-p~~-~aDivt~StHKtL~-GP~GG~ 373 (403)
.|++.+..+ +. ... +++|+++|+++|+++|+|.+|. |+-..+.. .. -.. ..|++ ++.|+|. |-+.|+
T Consensus 170 avi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~PDi~--t~sK~l~~G~pig~ 246 (382)
T PLN00144 170 AVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQC-GLGRTGYLWAHEAYGVEPDIM--TLAKPLAGGLPIGA 246 (382)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchHhhhhhcCCCCCEE--EecccccCCcceEE
Confidence 888775422 21 123 8999999999999999999986 33222211 11 111 25744 4579984 445677
Q ss_pred EEEeCC
Q 015609 374 IFFRRG 379 (403)
Q Consensus 374 I~~~~~ 379 (403)
++.+++
T Consensus 247 v~~~~~ 252 (382)
T PLN00144 247 VLVTEK 252 (382)
T ss_pred EEEcHH
Confidence 877654
No 318
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.23 E-value=4.2e-05 Score=79.70 Aligned_cols=164 Identities=14% Similarity=0.088 Sum_probs=89.8
Q ss_pred HHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchhhhcccc---e-EEe
Q 015609 204 ERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF---F-ESF 277 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~---~-~vv 277 (403)
+++.+++..... -..+.+||++|+.++++... ....+|+.....|.|+... .+ ..++..+.. + ...
T Consensus 100 ~~L~~~~~~~~~---~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~-~~----~~~~~~~~~~~~~~~~~ 171 (433)
T PRK00615 100 EELFSYLGLEDH---KIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADT-LL----QGISFSETSLDTLTHLV 171 (433)
T ss_pred HHHHHhCCCCcC---EEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcc-cC----cccccCCCCcCcCCCCC
Confidence 346666654321 13445689999999987552 2235687776555443200 00 001111100 0 000
Q ss_pred -eeecCCC---CCCCCHHHHHHHhccCC--CcEEEEeC--CCCCcccc----HHHHHHHHHHcCCEEEEecccccccccc
Q 015609 278 -PYKVNPQ---TGYIDYEKLEEKAMDYR--PKILICGG--SSYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAA 345 (403)
Q Consensus 278 -~~~vd~~---~g~ID~d~Le~~i~~~~--pklViv~~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~ 345 (403)
+-...+. -...|++++++++.+.. ...||+++ ++.|...+ +++|+++|+++|+++|+|.+|. |+ -.
T Consensus 172 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~-R~ 249 (433)
T PRK00615 172 DTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GF-RV 249 (433)
T ss_pred CCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-cc-cc
Confidence 0000000 01247899999886433 34566653 22344444 5699999999999999999994 65 22
Q ss_pred cc--ccCCCC-cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015609 346 KE--LASPFD-YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 346 g~--~~~p~~-~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
|. ...-++ ..|+++ +-|.|.| -++|+++++++
T Consensus 250 G~~ga~~~~gv~PDi~~--~gK~lggG~p~~av~~~~~ 285 (433)
T PRK00615 250 AQGGAAAIYHVKPDITV--YGKILGGGLPAAAVVAHKS 285 (433)
T ss_pred cHhHHHHhcCCCCCeEE--EcccccCCcceeeeeecHH
Confidence 21 111112 268876 5899964 44788888765
No 319
>PRK07046 aminotransferase; Validated
Probab=98.20 E-value=5.3e-05 Score=79.43 Aligned_cols=164 Identities=15% Similarity=0.123 Sum_probs=91.1
Q ss_pred HHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCC--ccchh---hhcccceE
Q 015609 203 FERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTP--GGKKV---SAASIFFE 275 (403)
Q Consensus 203 rerla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~--~~~~v---~~~g~~~~ 275 (403)
.++++++++.+. ..+.+|||+|+..+++... ...++|+...-.|.|+.. +.+.. .+... ...+....
T Consensus 121 Ae~l~~~~~~~~-----v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d-~~l~~~~~~~~~~~~~~~g~~~~ 194 (453)
T PRK07046 121 GEELARRFGLPY-----WQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVD-DVFVDLVDGRPVQRPGLLGQVHD 194 (453)
T ss_pred HHHHHHHhCCCE-----EEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcH-HhHhhccCCCCCCCCCCCCCCcc
Confidence 345667776443 2455689999999987552 235678887766555411 00000 00000 00010000
Q ss_pred Ee--eeecCCCCCCCCHHHHHHHhccCCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEecccccccccccc
Q 015609 276 SF--PYKVNPQTGYIDYEKLEEKAMDYRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKE 347 (403)
Q Consensus 276 vv--~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~ 347 (403)
+. .+.+ ...|++.+++++...+...||+++. +.|.+.+ +++++++|+++|++||+|.+|..+ ...+.
T Consensus 195 ~~~~~~~~----~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr-~g~Gg 269 (453)
T PRK07046 195 LTATTRVV----EFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTIS-SGPGG 269 (453)
T ss_pred ccCceEee----CCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCc-cCCcc
Confidence 00 0011 1248899999886444566777643 2333332 799999999999999999999732 11121
Q ss_pred ccCCCC-cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015609 348 LASPFD-YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 348 ~~~p~~-~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
...-++ ..|+++ +-|.|.| -+.|+++.+++
T Consensus 270 ~~~~~gv~PDi~t--~gK~lggG~Pi~av~g~~~ 301 (453)
T PRK07046 270 YTRAHGLEPDFLV--VGKPIAGGVPCAVYGFSAE 301 (453)
T ss_pred hhHHhCCCcccee--ehhhhcCCCcceeeeehHH
Confidence 221122 278886 5798864 33466666654
No 320
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=98.20 E-value=2.7e-05 Score=80.46 Aligned_cols=146 Identities=21% Similarity=0.110 Sum_probs=78.9
Q ss_pred EEeCChHHHHHHHHhhhcc----C-----CCeEEecCCCCCccccccccCCccchhhhccc-----ceEEeeeecCCCCC
Q 015609 221 VQPYSCTSANFAVYTGLLL----P-----GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI-----FFESFPYKVNPQTG 286 (403)
Q Consensus 221 V~~~SGT~An~aal~all~----p-----GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~-----~~~vv~~~vd~~~g 286 (403)
.+.+||++|+.++++.... . ..+|++....|.|... + .++..+. .+...+..+. .-.
T Consensus 102 ~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~-~-------~~s~~~~~~~~~~~~~~~~~~~-~~~ 172 (408)
T PRK04612 102 FLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTL-A-------AVTATAQPKYQEGYEPLPGGFR-YVD 172 (408)
T ss_pred EEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccH-H-------HHHhcCCcccccCCCCCCCCce-EcC
Confidence 4456899999999875421 1 2368887765544321 1 1111111 0110000000 001
Q ss_pred CCCHHHHHHHhccCCCcEEEEeCCC-C-Ccc-c---cHHHHHHHHHHcCCEEEEecccccccccccccc--CCCC-cccE
Q 015609 287 YIDYEKLEEKAMDYRPKILICGGSS-Y-PRE-W---DYGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPFD-YCDI 357 (403)
Q Consensus 287 ~ID~d~Le~~i~~~~pklViv~~s~-~-g~~-~---Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~~-~aDi 357 (403)
..|++.+++++...++.+|++.+.. . +.. . -+++|+++|+++|+++|+|.+|. |+-..|... ...+ ..|+
T Consensus 173 ~~d~~~l~~~~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi 251 (408)
T PRK04612 173 FNDVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDI 251 (408)
T ss_pred CCCHHHHHHhhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCE
Confidence 2478899988864455667776432 2 222 2 28999999999999999999987 432223111 1111 1455
Q ss_pred EEEcCcCCCcC-CceEEEEEeC
Q 015609 358 VTSTTHKSLRG-PRGGIIFFRR 378 (403)
Q Consensus 358 vt~StHKtL~G-P~GG~I~~~~ 378 (403)
+ ++.|.|.| -+-|+++.++
T Consensus 252 ~--t~~K~l~~G~piga~~~~~ 271 (408)
T PRK04612 252 V--TLAKALGGGFPIGAMLAGP 271 (408)
T ss_pred E--EEcchhcCCCceEEEEECH
Confidence 5 45799853 2235555554
No 321
>PRK06105 aminotransferase; Provisional
Probab=98.18 E-value=6.9e-05 Score=78.65 Aligned_cols=88 Identities=14% Similarity=0.066 Sum_probs=55.3
Q ss_pred HHHHHHHhcc---CCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEeccc-cccccccccccCCCC-cccEE
Q 015609 290 YEKLEEKAMD---YRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAH-ISGLIAAKELASPFD-YCDIV 358 (403)
Q Consensus 290 ~d~Le~~i~~---~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh-~~Glia~g~~~~p~~-~aDiv 358 (403)
++++++++.. .+...||+++- +.|...+ +++++++|+++|+++|+|.+| ++|.........-++ ..|++
T Consensus 204 ~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~ 283 (460)
T PRK06105 204 ANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDIL 283 (460)
T ss_pred HHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCee
Confidence 4667777742 23456777642 3455555 899999999999999999999 466543211111111 26887
Q ss_pred EEcCcCCCcCC--ceEEEEEeCC
Q 015609 359 TSTTHKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 359 t~StHKtL~GP--~GG~I~~~~~ 379 (403)
+ +-|.|.|- +.|+++++++
T Consensus 284 ~--~gK~lggG~~P~~av~~~~~ 304 (460)
T PRK06105 284 V--MSKQLSSSYQPLSAVLMNEK 304 (460)
T ss_pred e--eecccccCcccceEEEEcHH
Confidence 6 46988652 3566666653
No 322
>PRK06062 hypothetical protein; Provisional
Probab=98.18 E-value=5.4e-05 Score=79.22 Aligned_cols=86 Identities=19% Similarity=0.184 Sum_probs=54.9
Q ss_pred HHHHHHHhccC---CCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEE
Q 015609 290 YEKLEEKAMDY---RPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIV 358 (403)
Q Consensus 290 ~d~Le~~i~~~---~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDiv 358 (403)
++.++++++.. +...||+++. +.|.+.+ +++|+++|+++|++||+|.+|+ +|-........-++ ..|++
T Consensus 200 ~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~ 279 (451)
T PRK06062 200 LAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLI 279 (451)
T ss_pred HHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCee
Confidence 67788888532 3456676642 3355556 9999999999999999999987 33222111111112 26877
Q ss_pred EEcCcCCCcC---CceEEEEEe
Q 015609 359 TSTTHKSLRG---PRGGIIFFR 377 (403)
Q Consensus 359 t~StHKtL~G---P~GG~I~~~ 377 (403)
+ +-|.|.| |-|+++..+
T Consensus 280 t--~gK~lggG~~Pigav~~~~ 299 (451)
T PRK06062 280 T--FAKGVNSGYVPLGGVAISE 299 (451)
T ss_pred e--echhhhcCCcCcEEEEEcH
Confidence 6 5799976 666655543
No 323
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.17 E-value=1.1e-05 Score=85.92 Aligned_cols=157 Identities=24% Similarity=0.276 Sum_probs=106.1
Q ss_pred HHHHHHHcCCCCCCCcceEEeCChHH---HHHHHHhhhc-cCCC--e-E-EecCCCCCccccccccCCccchhhhcccce
Q 015609 203 FERALKAFDLDSDNWGVNVQPYSCTS---ANFAVYTGLL-LPGD--R-I-MGLDSPSGGHLSHGYHTPGGKKVSAASIFF 274 (403)
Q Consensus 203 rerla~lfg~~~~~~~v~V~~~SGT~---An~aal~all-~pGD--~-V-L~~~~ehgghlsh~~~~~~~~~v~~~g~~~ 274 (403)
.+.++++-|.+. +.+|++||.+ |-+.++++.+ ..|+ + | +++...||- ++.+..-.+.
T Consensus 588 e~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGT-----------NPASA~Magm 652 (1001)
T KOG2040|consen 588 EKDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGT-----------NPASAAMAGM 652 (1001)
T ss_pred HHHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCC-----------ChhhHHhcCC
Confidence 446889999987 5799999875 4455666654 3443 2 2 333333332 2233222336
Q ss_pred EEeeeecCCCCCCCCHHHHHHHhccCCCcE--EEEe-CCCCC-ccccHHHHHHHHHHcCCEEEEeccccccccccccccC
Q 015609 275 ESFPYKVNPQTGYIDYEKLEEKAMDYRPKI--LICG-GSSYP-REWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELAS 350 (403)
Q Consensus 275 ~vv~~~vd~~~g~ID~d~Le~~i~~~~pkl--Viv~-~s~~g-~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~ 350 (403)
++++++++. +|.||+.+|++++++++-+| +++. +|.+| ..-+++.++++.+++|--+..|+|.--.-+. . -.
T Consensus 653 kvvpV~~~~-~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVG--l-c~ 728 (1001)
T KOG2040|consen 653 KVVPVGCDA-NGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVG--L-CR 728 (1001)
T ss_pred EEEEeeccC-CCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceec--c-cC
Confidence 778888874 79999999999998875443 4444 55666 4678999999999999999999987654332 1 23
Q ss_pred CCC-cccEEEEcCcCCCcCCce------EEEEEeC
Q 015609 351 PFD-YCDIVTSTTHKSLRGPRG------GIIFFRR 378 (403)
Q Consensus 351 p~~-~aDivt~StHKtL~GP~G------G~I~~~~ 378 (403)
|-+ ++|+.--..||+|+=|.| |-|..++
T Consensus 729 pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~ 763 (1001)
T KOG2040|consen 729 PGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK 763 (1001)
T ss_pred CccccccceeecccceeeecCCCCCCCCCccchhh
Confidence 434 499999999999965543 5555555
No 324
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.17 E-value=4.8e-05 Score=85.52 Aligned_cols=151 Identities=12% Similarity=0.062 Sum_probs=96.3
Q ss_pred HHHHHHHHcCCCCCCCcceEEeC-ChHHHHHHHHhhh-c--cCCCeEEecCCCCCccccccccCCccchhhhcccceEEe
Q 015609 202 CFERALKAFDLDSDNWGVNVQPY-SCTSANFAVYTGL-L--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESF 277 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~-SGT~An~aal~al-l--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv 277 (403)
.+..+++|.|++-+ |.... .+|.+..+++++. . +++++|++++..|...+. ++ +. .....+++++
T Consensus 114 ~Qt~i~eLtGm~~a----NaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~---v~---~t-~a~~~g~~v~ 182 (939)
T TIGR00461 114 FQTVVSDLTGLPVA----NASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKS---VL---HT-RAKPFGIEVI 182 (939)
T ss_pred HHHHHHHHHCCChh----hhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHH---HH---HH-HHHhcCcEEE
Confidence 46679999999963 33333 4666666666664 2 234889998877543321 00 00 1122334444
Q ss_pred eeecCCCCCCCCHHHHHHHhccCCCcEEEEeC-CCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cc
Q 015609 278 PYKVNPQTGYIDYEKLEEKAMDYRPKILICGG-SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YC 355 (403)
Q Consensus 278 ~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~-s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~a 355 (403)
. +|+++|++.+ +...+++.. ..+|.+.|+++|.+++|++|+++++++-..+..+ ...|-+ ++
T Consensus 183 ~---------~~~~~l~~~~---~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~l----l~~Pge~Ga 246 (939)
T TIGR00461 183 V---------VDCSDIKKAV---DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMALTL----LTPPGHYGA 246 (939)
T ss_pred E---------EcHHHHhhcC---CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhCC----cCCHHHcCC
Confidence 3 3556666555 244555544 4568778999999999999999999776555432 334444 49
Q ss_pred cEEEEcCcCCC-----cCCceEEEEEeCC
Q 015609 356 DIVTSTTHKSL-----RGPRGGIIFFRRG 379 (403)
Q Consensus 356 Divt~StHKtL-----~GP~GG~I~~~~~ 379 (403)
||++++++++. +||..|++.+++.
T Consensus 247 Di~vg~~q~fg~p~g~GGP~aG~~a~~~~ 275 (939)
T TIGR00461 247 DIVLGSSQRFGVPMGYGGPHAAFFAVKDE 275 (939)
T ss_pred cEEeeCCCccCCCCCCCCCceeeeeecHh
Confidence 99988877753 4788899999875
No 325
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.17 E-value=5.1e-06 Score=85.45 Aligned_cols=179 Identities=12% Similarity=0.071 Sum_probs=113.0
Q ss_pred cchHHHHHHHHHHHHHHHHHcCCCCCC------CcceEEeCChHHHHHHHHhhh-------ccCC-----------CeEE
Q 015609 190 TGNQYIDQIENLCFERALKAFDLDSDN------WGVNVQPYSCTSANFAVYTGL-------LLPG-----------DRIM 245 (403)
Q Consensus 190 ~G~~~~~~lE~~arerla~lfg~~~~~------~~v~V~~~SGT~An~aal~al-------l~pG-----------D~VL 245 (403)
..++.+.+||....+++.++++++... =|..|+..|++++++.++.+. ++.+ +-|+
T Consensus 106 ~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~ 185 (511)
T KOG0628|consen 106 ASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVA 185 (511)
T ss_pred ecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheE
Confidence 457888999999999999999876321 134577778888888877654 1222 2233
Q ss_pred ecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHhccCC-----CcEEEEe--CCCCCccccH
Q 015609 246 GLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYR-----PKILICG--GSSYPREWDY 318 (403)
Q Consensus 246 ~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~-----pklViv~--~s~~g~~~Di 318 (403)
..... +|.++. +...+.+ ++...++.|. +..++.+.|+++|++.. |-+|++. .++.-..-++
T Consensus 186 Y~SDq-----ahssve---ka~~i~~--VklR~l~td~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l 254 (511)
T KOG0628|consen 186 YCSDQ-----AHSSVE---KACLIAG--VKLRALPTDE-NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDEL 254 (511)
T ss_pred EecCc-----ccchHH---HhHhhcc--eeEEEeeccc-CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccH
Confidence 32221 233322 2222233 3444555554 67899999999998643 3344432 2233345689
Q ss_pred HHHHHHHHHcCCEEEEeccccccccccccc---cCCCCcccEEEEcCcCCCcCCc-eEEEEEeCC
Q 015609 319 GRFRQIADKCGAVLMCDMAHISGLIAAKEL---ASPFDYCDIVTSTTHKSLRGPR-GGIIFFRRG 379 (403)
Q Consensus 319 ~~I~~Iake~Ga~LivDaAh~~Glia~g~~---~~p~~~aDivt~StHKtL~GP~-GG~I~~~~~ 379 (403)
.+|..||+++|++||||+|-+-.....+.+ ...++++|-+.+..|||+.-.- ...++.+++
T Consensus 255 ~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~ 319 (511)
T KOG0628|consen 255 EELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDG 319 (511)
T ss_pred HHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecC
Confidence 999999999999999999954333223322 2344579999999999975432 345555554
No 326
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=98.15 E-value=1.9e-05 Score=78.70 Aligned_cols=153 Identities=15% Similarity=0.059 Sum_probs=91.5
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCh-HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015609 202 CFERALKAFDLDSDNWGVNVQPYSC-TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SG-T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
.|+.+++++|.+.. +|+.++| ++++..++. ++++|+ |++..+.+.... ..+...| .+++.++
T Consensus 45 lr~~ia~~~~~~~~----~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~---------~~~~~~G--~~v~~vp 107 (332)
T PRK06425 45 IEDQIKIYTQGLKI----KVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYK---------GYAFTHG--IRISALP 107 (332)
T ss_pred HHHHHHHHhCCCcc----eEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHH---------HHHHHcC--CeEEEEe
Confidence 35678999999874 5666654 568877775 567875 444455443221 1233444 3555666
Q ss_pred cCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--Ccccc---HHHHHHHHHHcCCEEEEeccccccccccccccCCC---
Q 015609 281 VNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF--- 352 (403)
Q Consensus 281 vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~--- 352 (403)
++. ..+|.+.++ ..++|+|++..+++ |...+ +++|.++|+++|+++++|.+-. -+...+ .+...
T Consensus 108 ~~~--~~~~~~~l~----~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~-~~~~~~-~~~~~~~~ 179 (332)
T PRK06425 108 FNL--INNNPEILN----NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFI-DFVPNR-AEEDVLLN 179 (332)
T ss_pred CCc--ccCcHHHHh----hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchh-cccccc-chhHHHHh
Confidence 553 234655444 24688887765554 45565 5666777889999999999843 222111 11101
Q ss_pred C-ccc-EEEEcCcCCCc--CCceEEEEEeCC
Q 015609 353 D-YCD-IVTSTTHKSLR--GPRGGIIFFRRG 379 (403)
Q Consensus 353 ~-~aD-ivt~StHKtL~--GP~GG~I~~~~~ 379 (403)
+ +-. +++.|+.|+++ |-|-|+++.+++
T Consensus 180 ~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~ 210 (332)
T PRK06425 180 RSYGNVIIGRSLTKILGIPSLRIGYIATDDY 210 (332)
T ss_pred ccCCCEEEEeecHHhcCCchhhheeeecCHH
Confidence 1 112 66789999863 444599998754
No 327
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.13 E-value=0.00011 Score=76.69 Aligned_cols=76 Identities=22% Similarity=0.272 Sum_probs=49.1
Q ss_pred CCcEEEEeC--CCCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCCCcC-Cc
Q 015609 301 RPKILICGG--SSYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRG-PR 370 (403)
Q Consensus 301 ~pklViv~~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKtL~G-P~ 370 (403)
+...|++++ ++.|...+ +++|.++|+++|+++++|.+|. |+...|.. ...++ ..|++++ -|.|.| -+
T Consensus 221 ~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv~pDivt~--~K~l~~G~p 297 (441)
T PRK05769 221 EVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGVEPDIITL--AKAIAGGLP 297 (441)
T ss_pred ceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCCCCCEEEE--cccccCCcc
Confidence 345566653 23455666 9999999999999999999998 43223321 11122 2588875 488854 23
Q ss_pred eEEEEEeCC
Q 015609 371 GGIIFFRRG 379 (403)
Q Consensus 371 GG~I~~~~~ 379 (403)
.|+++++++
T Consensus 298 ~gav~~~~~ 306 (441)
T PRK05769 298 LGAVIGRAE 306 (441)
T ss_pred cEEEEEehh
Confidence 467777665
No 328
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.07 E-value=0.00016 Score=74.11 Aligned_cols=167 Identities=17% Similarity=0.158 Sum_probs=105.7
Q ss_pred HHHHHHHcCCCCCCCcceEEeC-ChHHHHHHHHhhh-c--cCCCeEEecCCCCCccccccccCCccchhhhcccceEEee
Q 015609 203 FERALKAFDLDSDNWGVNVQPY-SCTSANFAVYTGL-L--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFP 278 (403)
Q Consensus 203 rerla~lfg~~~~~~~v~V~~~-SGT~An~aal~al-l--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~ 278 (403)
+..+++|.|.+-+ |-... .+|.+-.++.++. . ++..+|++....|.-++.. . +. ...+.+++++.
T Consensus 126 Qtlv~dLTGm~VA----NASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~V---l---~T-ra~~~g~~i~~ 194 (450)
T COG0403 126 QTLVADLTGLDVA----NASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDV---L---RT-RAEGLGIEIEV 194 (450)
T ss_pred HHHHHHHhCCCcc----cchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHH---H---Hh-hcccCceEEEE
Confidence 5668999999863 33222 4677777777665 2 2357899988765444321 0 00 11234455555
Q ss_pred eecCCCCCCCCHHHHHHHhccCCCcEEEEeCC-CCC-ccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cc
Q 015609 279 YKVNPQTGYIDYEKLEEKAMDYRPKILICGGS-SYP-REWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YC 355 (403)
Q Consensus 279 ~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s-~~g-~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~a 355 (403)
++++ |.+++++. +......|++..+ .+| .+.|+++|.+++|+.|+++++=.- .++.+.+..|-+ ++
T Consensus 195 ~~~~------d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aD----plaL~LL~pPGe~GA 263 (450)
T COG0403 195 VDAD------DLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAAD----PLALGLLKPPGEFGA 263 (450)
T ss_pred eccc------hhhhhhhc-cccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEec----hhHhhccCCccccCC
Confidence 4432 77888877 4434556666654 467 677899999999999998877332 233344445555 49
Q ss_pred cEEEEcCcCC-----CcCCceEEEEEeCCCCCcccCCCcccCCc
Q 015609 356 DIVTSTTHKS-----LRGPRGGIIFFRRGKKPRKQGIPLNHGDV 394 (403)
Q Consensus 356 Divt~StHKt-----L~GP~GG~I~~~~~~~~~~~~~p~~qGg~ 394 (403)
||++++++-. |+||..|++.++++. .+ ..||..-|.
T Consensus 264 DIvvG~~QrfGvPmgfGGPhag~fA~~~~~--~R-~mPGRlVG~ 304 (450)
T COG0403 264 DIVVGSAQRFGVPMGFGGPHAGYFAVKDEF--KR-QMPGRLVGV 304 (450)
T ss_pred ceEEecCcccCCCcCCCCcceeeeeEhHhH--hh-cCCCceeee
Confidence 9999999963 578888999998863 22 345544443
No 329
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.07 E-value=0.00015 Score=76.56 Aligned_cols=161 Identities=19% Similarity=0.146 Sum_probs=86.5
Q ss_pred HHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cCCCeEEecCCCCCccccc-cccCCccc-hh--h-hcccc---
Q 015609 204 ERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSH-GYHTPGGK-KV--S-AASIF--- 273 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~pGD~VL~~~~ehgghlsh-~~~~~~~~-~v--~-~~g~~--- 273 (403)
+++++.+..-. -..+.+|||+|+.++++... ....+|+.....|.|+... ......+. .. . ..+..
T Consensus 146 e~l~~~~p~~~----~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 221 (474)
T PLN02482 146 EMVIDAVPSVE----MVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAA 221 (474)
T ss_pred HHHHHhCCCCC----EEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCC
Confidence 34556654211 12445689999999987552 2346788877655443210 00000000 00 0 00000
Q ss_pred -eEEeeeecCCCCCCCCHHHHHHHhccCC--CcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEeccccccccc
Q 015609 274 -FESFPYKVNPQTGYIDYEKLEEKAMDYR--PKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIA 344 (403)
Q Consensus 274 -~~vv~~~vd~~~g~ID~d~Le~~i~~~~--pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia 344 (403)
-.+..++ ..|++++++++.++. ...||+++. +.|.+.+ +++|+++|+++|++||+|.+| .|+ -
T Consensus 222 ~~~~~~~~------~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGf-R 293 (474)
T PLN02482 222 TSATLTAP------YNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM-TGF-R 293 (474)
T ss_pred CCCeEEec------CCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCe-e
Confidence 0011111 237899999886542 345666532 3343333 678999999999999999999 565 2
Q ss_pred ccc--ccCCCC-cccEEEEcCcCCCcC--CceEEEEEeCC
Q 015609 345 AKE--LASPFD-YCDIVTSTTHKSLRG--PRGGIIFFRRG 379 (403)
Q Consensus 345 ~g~--~~~p~~-~aDivt~StHKtL~G--P~GG~I~~~~~ 379 (403)
.+. ...-++ ..|+++ +-|.|.| |-|++ +++++
T Consensus 294 ~g~~ga~~~~gv~PDi~t--~gK~lggG~Pigav-~g~~e 330 (474)
T PLN02482 294 IAYGGAQEYFGITPDLTT--LGKVIGGGLPVGAY-GGRRE 330 (474)
T ss_pred cCcchHhHHhCCCCCEEE--ecchhhCCCceEEE-EEcHH
Confidence 221 111112 268865 4799865 55555 55554
No 330
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=98.06 E-value=0.00023 Score=74.41 Aligned_cols=194 Identities=18% Similarity=0.064 Sum_probs=99.1
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cCC
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LPG 241 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~pG 241 (403)
+|.|.+|+...+.... +.+..++ .++.. + + .-+++++++..... ...+.+||++|+.++++... ...
T Consensus 59 ~p~v~~Ai~~ql~~~~---~~~~~~~-~~~~~--~-~-la~~L~~~~p~~~~---~v~f~~sGsEAve~AlklAr~~tgr 127 (443)
T PRK08360 59 NPRVVKAIKEQTDKLI---HYTPIYG-FPVEP--L-L-LAEKLIEIAPGDNP---KVSFGLSGSDANDGAIKFARAYTKR 127 (443)
T ss_pred CHHHHHHHHHHHHhcc---Ccccccc-CcHHH--H-H-HHHHHHHhCCCCCC---EEEEcCCHHHHHHHHHHHHHHhcCC
Confidence 7777777776665321 1111111 12211 2 2 23346677654322 22445689999999987542 234
Q ss_pred CeEEecCCCCCccccccccCCccchhhhccc------------ceEEeeeecC---CCCC------CCCHHHHHHHhcc-
Q 015609 242 DRIMGLDSPSGGHLSHGYHTPGGKKVSAASI------------FFESFPYKVN---PQTG------YIDYEKLEEKAMD- 299 (403)
Q Consensus 242 D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~------------~~~vv~~~vd---~~~g------~ID~d~Le~~i~~- 299 (403)
.+|+.....+.|... + .++..+. .+..++|+-. +... .-+++.++++++.
T Consensus 128 ~~ii~~~~~yHG~t~-~-------a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 199 (443)
T PRK08360 128 RKILSYLRSYYGSTY-G-------AMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGE 199 (443)
T ss_pred CeEEEEeCCcCCcCH-H-------HHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhc
Confidence 567776655544310 0 0111110 0112222100 0000 0234556666642
Q ss_pred ---CCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCCCc
Q 015609 300 ---YRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKSLR 367 (403)
Q Consensus 300 ---~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKtL~ 367 (403)
.+++.|++++. ..|...+ +++|.++|+++|+++++|.+|. |+...|.. ...++ ..|++++ .|+|.
T Consensus 200 ~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~gr~G~~~a~~~~~~~pDiitl--sK~l~ 276 (443)
T PRK08360 200 VYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS-GLGRTGKWFAIEHFGVEPDIITL--GKPLG 276 (443)
T ss_pred cCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCccchhhhhcCCCCCEEEe--ccccc
Confidence 34567777643 2343332 8999999999999999999987 33222221 11112 2577754 89985
Q ss_pred C-CceEEEEEeCC
Q 015609 368 G-PRGGIIFFRRG 379 (403)
Q Consensus 368 G-P~GG~I~~~~~ 379 (403)
+ -+.|+++++++
T Consensus 277 ~G~pigav~~~~~ 289 (443)
T PRK08360 277 GGLPISATIGRAE 289 (443)
T ss_pred CCceeEEEEEcHH
Confidence 3 24577877654
No 331
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.05 E-value=8.8e-05 Score=77.35 Aligned_cols=84 Identities=13% Similarity=0.070 Sum_probs=50.0
Q ss_pred HHHHhccCCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCc
Q 015609 293 LEEKAMDYRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTH 363 (403)
Q Consensus 293 Le~~i~~~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StH 363 (403)
+++.+...+...||+++. +.|...+ +++|+++|+++|+++|+|.+|. |+.-.|.. ..-++ ..|+++++
T Consensus 211 l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv~PDiv~~g-- 287 (443)
T PRK06058 211 IEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQT-GFARTGAWFACEHEGIVPDLITTA-- 287 (443)
T ss_pred HHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcChhhhHHHhcCCCCCEEEEc--
Confidence 344433234566777642 2233332 8999999999999999999986 43222211 01111 26898875
Q ss_pred CCCcC-CceEEEEEeCC
Q 015609 364 KSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 364 KtL~G-P~GG~I~~~~~ 379 (403)
|.|.| -+-|+++.+++
T Consensus 288 K~l~~G~Pi~av~~~~~ 304 (443)
T PRK06058 288 KGIAGGLPLSAVTGRAE 304 (443)
T ss_pred ccccCCCccEEEEEcHH
Confidence 99853 23366666654
No 332
>PRK07480 putative aminotransferase; Validated
Probab=98.03 E-value=0.00018 Score=75.42 Aligned_cols=83 Identities=19% Similarity=0.177 Sum_probs=49.8
Q ss_pred HHHHHHhccC---CCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEE
Q 015609 291 EKLEEKAMDY---RPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVT 359 (403)
Q Consensus 291 d~Le~~i~~~---~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt 359 (403)
+.+++.+... +...||+++. +.|...+ +++++++|+++|++||+|.+|. +|-........-++ ..|+++
T Consensus 206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~ 285 (456)
T PRK07480 206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT 285 (456)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeee
Confidence 5666555322 2345666642 2344433 8999999999999999999985 44332111111112 268876
Q ss_pred EcCcCCCcC---CceEEEE
Q 015609 360 STTHKSLRG---PRGGIIF 375 (403)
Q Consensus 360 ~StHKtL~G---P~GG~I~ 375 (403)
+ -|.|.| |-|+++.
T Consensus 286 ~--gK~l~gG~~Pi~av~~ 302 (456)
T PRK07480 286 I--AKGLTSGYIPMGAVGV 302 (456)
T ss_pred e--ehhhccCCccceEEEE
Confidence 5 698865 5555554
No 333
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=98.03 E-value=0.00019 Score=74.44 Aligned_cols=154 Identities=14% Similarity=0.044 Sum_probs=83.6
Q ss_pred eEEeCChHHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchhhh-cc-----cceEEeeeecCCCCCC---C
Q 015609 220 NVQPYSCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSA-AS-----IFFESFPYKVNPQTGY---I 288 (403)
Q Consensus 220 ~V~~~SGT~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~-~g-----~~~~vv~~~vd~~~g~---I 288 (403)
.++.+||++|+.++++... ....+|++....|.|... +.+.-++..... .+ ..+..++++.+. .+. -
T Consensus 104 ~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~-~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~ 181 (421)
T PRK09792 104 TAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTY-MTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQD 181 (421)
T ss_pred EEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccH-HHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHH
Confidence 3556799999999987553 223578887766544421 100000000000 00 012223333221 111 2
Q ss_pred CHHHHHHHhcc----CCCcEEEEeCCC--CCcc-cc---HHHHHHHHHHcCCEEEEecccc-ccccccccc-c-CCCC-c
Q 015609 289 DYEKLEEKAMD----YRPKILICGGSS--YPRE-WD---YGRFRQIADKCGAVLMCDMAHI-SGLIAAKEL-A-SPFD-Y 354 (403)
Q Consensus 289 D~d~Le~~i~~----~~pklViv~~s~--~g~~-~D---i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~-~-~p~~-~ 354 (403)
+++.+++++++ .+.+.|++++.. .|.. .+ +++|.++|+++|+++|+|.+|. +|- .|.. . .-++ .
T Consensus 182 ~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr--~G~~~a~~~~~~~ 259 (421)
T PRK09792 182 SLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFAR--TGKLFAMDHYADK 259 (421)
T ss_pred HHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCC--CCchhHHHhcCCC
Confidence 35788888763 345677776542 3333 35 8899999999999999999976 332 2211 0 1111 2
Q ss_pred ccEEEEcCcCCCcC-CceEEEEEeCC
Q 015609 355 CDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 355 aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
.|++ ++.|+|.| -+-|+++++++
T Consensus 260 pDi~--t~gK~l~~G~pigav~~~~~ 283 (421)
T PRK09792 260 PDLM--TMAKSLAGGMPLSGVVGNAN 283 (421)
T ss_pred CcEE--EeehhhcCCCceEEEEEcHH
Confidence 6765 45799853 33466777654
No 334
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=98.02 E-value=0.00029 Score=73.22 Aligned_cols=170 Identities=16% Similarity=0.061 Sum_probs=87.3
Q ss_pred HHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchhhhc---c---cce
Q 015609 203 FERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAA---S---IFF 274 (403)
Q Consensus 203 rerla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~---g---~~~ 274 (403)
.+++++++...... ..++.+||++|+.++++... ....+|++....|.|... +.+.-.+...... + ..+
T Consensus 89 a~~l~~~~p~~~~~--~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~-~~~~~~~~~~~~~~~~~~~~~~~ 165 (425)
T PRK07495 89 AERLNALVPGDFAK--KTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTF-MGMSLTGKVVPYKVGFGAMMPDV 165 (425)
T ss_pred HHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccH-HHhhhcCCCcccccCCCCCCCCe
Confidence 34566766532100 23445689999999987542 234578877765544321 1000000000000 0 012
Q ss_pred EEeeeecCCCCCC---CCHHHHHHHhcc----CCCcEEEEeCC--CCCcc-c---cHHHHHHHHHHcCCEEEEecccccc
Q 015609 275 ESFPYKVNPQTGY---IDYEKLEEKAMD----YRPKILICGGS--SYPRE-W---DYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 275 ~vv~~~vd~~~g~---ID~d~Le~~i~~----~~pklViv~~s--~~g~~-~---Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
..++++.+. .+. -+++++++++.. .+.+.|++.+. +.|.. . -+++|.++|+++|+++|+|.+|. |
T Consensus 166 ~~~~~~~~~-~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G 243 (425)
T PRK07495 166 YHVPFPVEL-HGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-G 243 (425)
T ss_pred EEecCCccc-ccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-c
Confidence 223333211 111 124556776642 23566777642 23322 2 37899999999999999999986 5
Q ss_pred ccccccc--cCCCC-cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015609 342 LIAAKEL--ASPFD-YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 342 lia~g~~--~~p~~-~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
+-..|.. ...++ ..|+++ +.|.|.| -+.|+++++++
T Consensus 244 ~gr~G~~~a~~~~gv~pDi~t--lsK~l~~G~pigav~~~~~ 283 (425)
T PRK07495 244 FARTGKLFAMEHHEVAADLTT--MAKGLAGGFPLAAVTGRAE 283 (425)
T ss_pred CCcCCCceeecccCCCCCEEe--ehhhhcCCccceEEEEcHH
Confidence 4333321 11111 257655 5798853 34577777654
No 335
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=97.99 E-value=0.00041 Score=72.06 Aligned_cols=155 Identities=15% Similarity=0.069 Sum_probs=86.7
Q ss_pred HHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchhhhccc---------
Q 015609 204 ERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI--------- 272 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~--------- 272 (403)
+++.+++.. .. ...+.+||++|+.++++... ....+|+.....+.|... + .+...+.
T Consensus 100 ~~l~~~~p~-~~---~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~-~-------~~~~~~~~~~~~~~~~ 167 (428)
T PRK12389 100 KMLKEAIPS-LE---KVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSD-L-------VLVAAGSGPSTLGTPD 167 (428)
T ss_pred HHHHHhCCC-Cc---EEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChH-H-------HHHhcCCcccccCCCC
Confidence 345565542 11 13445689999999987542 234578887765544321 0 0111110
Q ss_pred --ce------EEeeeecCCCCCCCCHHHHHHHhccC--CCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEec
Q 015609 273 --FF------ESFPYKVNPQTGYIDYEKLEEKAMDY--RPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDM 336 (403)
Q Consensus 273 --~~------~vv~~~vd~~~g~ID~d~Le~~i~~~--~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDa 336 (403)
.+ .+..++ ..|++.+++++.++ +...||+++. ..|.+.+ +++|+++|+++|+++|+|.
T Consensus 168 ~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DE 241 (428)
T PRK12389 168 SAGVPKSIAQEVITVP------FNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDE 241 (428)
T ss_pred CCCCCCcccCceEEcC------CCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 00 011111 23789999888643 2345666632 3355555 9999999999999999999
Q ss_pred cccccccccccccCCCC-cccEEEEcCcCCCcC--CceEEEEEeCC
Q 015609 337 AHISGLIAAKELASPFD-YCDIVTSTTHKSLRG--PRGGIIFFRRG 379 (403)
Q Consensus 337 Ah~~Glia~g~~~~p~~-~aDivt~StHKtL~G--P~GG~I~~~~~ 379 (403)
+|...-...+....-++ ..|+++ +-|.|.| |-|++ +++++
T Consensus 242 V~tG~Rt~~~~a~~~~gv~PDivt--~gK~lggG~Pi~av-~~~~~ 284 (428)
T PRK12389 242 VITAFRFMYGGAQDLLGVEPDLTA--LGKIIGGGLPIGAY-GGRKD 284 (428)
T ss_pred cccccccCcchhhHHhCCCCCeee--echhhcCCCceeEE-eEHHH
Confidence 98732111111111112 268864 5798865 44444 66554
No 336
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=97.98 E-value=0.00014 Score=75.96 Aligned_cols=88 Identities=25% Similarity=0.192 Sum_probs=53.3
Q ss_pred HHHHHHHhccC---CCcEEEEeC--CCCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEE
Q 015609 290 YEKLEEKAMDY---RPKILICGG--SSYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIV 358 (403)
Q Consensus 290 ~d~Le~~i~~~---~pklViv~~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDiv 358 (403)
.++++++++.. +...|++++ +..|...+ +++|+++|+++|++||+|.+|. +|-.+......-++ ..|++
T Consensus 204 ~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~ 283 (445)
T PRK09221 204 ADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDII 283 (445)
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEE
Confidence 35777777643 234566664 23455566 9999999999999999999985 44222111111111 25877
Q ss_pred EEcCcCCCcC--CceEEEEEeCC
Q 015609 359 TSTTHKSLRG--PRGGIIFFRRG 379 (403)
Q Consensus 359 t~StHKtL~G--P~GG~I~~~~~ 379 (403)
++ -|.|.| .+.|+++++++
T Consensus 284 ~~--gK~l~gG~~Pi~av~~~~~ 304 (445)
T PRK09221 284 TF--AKGLTNGAIPMGAVIASDE 304 (445)
T ss_pred Ee--ccccccCcccceeeEEcHH
Confidence 54 587753 33455565543
No 337
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=97.93 E-value=0.00015 Score=75.72 Aligned_cols=87 Identities=16% Similarity=0.081 Sum_probs=52.2
Q ss_pred HHHHHHhcc----CCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEE
Q 015609 291 EKLEEKAMD----YRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIV 358 (403)
Q Consensus 291 d~Le~~i~~----~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDiv 358 (403)
+++++++.. .+...||+++. +.|...+ +++|+++|+++|++||+|.+|. +|-........-++ ..|++
T Consensus 193 ~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~ 272 (445)
T PRK08593 193 APLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLM 272 (445)
T ss_pred HHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEe
Confidence 445554432 23456777642 2344444 8999999999999999999984 44322110001111 26877
Q ss_pred EEcCcCCCcC-CceEEEEEeCC
Q 015609 359 TSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 359 t~StHKtL~G-P~GG~I~~~~~ 379 (403)
+ +-|.|.| -+.|+++++++
T Consensus 273 t--~gK~l~~G~p~gav~~~~~ 292 (445)
T PRK08593 273 S--FGKSLAGGMPMSAIVGRKE 292 (445)
T ss_pred e--ecccccCCcccEEEEEcHH
Confidence 5 5788863 34677777754
No 338
>PRK07678 aminotransferase; Validated
Probab=97.90 E-value=0.0003 Score=73.65 Aligned_cols=85 Identities=14% Similarity=0.081 Sum_probs=51.0
Q ss_pred HHHHHhcc---CCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEeccc-cccccccc-cccCCCC-cccEEE
Q 015609 292 KLEEKAMD---YRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAH-ISGLIAAK-ELASPFD-YCDIVT 359 (403)
Q Consensus 292 ~Le~~i~~---~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh-~~Glia~g-~~~~p~~-~aDivt 359 (403)
.+++++.. .+...||+++- +.|...+ +++++++|+++|++||+|.+| ++|-.... ..+ -++ ..|+++
T Consensus 201 ~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~-~~gv~PDivt 279 (451)
T PRK07678 201 EIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFM-NYGVKPDIIT 279 (451)
T ss_pred HHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHH-hcCCCCCEEE
Confidence 35666642 23455677642 3343333 899999999999999999998 45553311 111 122 279887
Q ss_pred EcCcCCCcCC--ceEEEEEeCC
Q 015609 360 STTHKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 360 ~StHKtL~GP--~GG~I~~~~~ 379 (403)
+ -|.|.|- +-|+++++++
T Consensus 280 ~--gK~lggG~~Pi~av~~~~~ 299 (451)
T PRK07678 280 M--AKGITSAYLPLSATAVKKE 299 (451)
T ss_pred e--ecccccCCcceeEEEEcHH
Confidence 6 6988642 2345555543
No 339
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.89 E-value=2.8e-05 Score=79.30 Aligned_cols=163 Identities=15% Similarity=0.079 Sum_probs=90.2
Q ss_pred HHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCC
Q 015609 206 ALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNP 283 (403)
Q Consensus 206 la~lfg~~~~~~~v~V~~~SGT~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~ 283 (403)
+.+.+|+.... .+.+.|..--.++.+++.++- ..++.|+.+...|...+ +.+...|....+++-...+
T Consensus 65 ~~~~~G~~~~~-~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~---------kai~~AGl~~~vV~~~~~~ 134 (389)
T PF05889_consen 65 ALRLAGLRSVK-SCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCF---------KAIERAGLEPVVVENVLEG 134 (389)
T ss_dssp HHHHTTHTTHC-EEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHH---------HHHHHTT-EEEEE-EEEET
T ss_pred HHHHcCCcccc-ceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchH---------HHHHhcCCeEEEeeccCCC
Confidence 34567876421 123444322235556666663 35678888877653222 3444555444444433333
Q ss_pred CCCCCCHHHHHHHhccCCC--cEEEEeCC--CCCcccc-HHHHHHHHHHcCCEEEEeccccccccc-cccccCC--CCcc
Q 015609 284 QTGYIDYEKLEEKAMDYRP--KILICGGS--SYPREWD-YGRFRQIADKCGAVLMCDMAHISGLIA-AKELASP--FDYC 355 (403)
Q Consensus 284 ~~g~ID~d~Le~~i~~~~p--klViv~~s--~~g~~~D-i~~I~~Iake~Ga~LivDaAh~~Glia-~g~~~~p--~~~a 355 (403)
+.-..|.+.+|+.+++..+ .+.++..+ .+|+..| +++|++||+++|++.++.+|-++=.-. ...+... ...+
T Consensus 135 d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRv 214 (389)
T PF05889_consen 135 DELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRV 214 (389)
T ss_dssp TEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTC
T ss_pred CeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCc
Confidence 3345788999999976443 34444433 4688888 999999999999999999986650000 0000000 0126
Q ss_pred cEEEEcCcCCCcCCceEEEEEeC
Q 015609 356 DIVTSTTHKSLRGPRGGIIFFRR 378 (403)
Q Consensus 356 Divt~StHKtL~GP~GG~I~~~~ 378 (403)
|+++-|+-|.|.-|-||.+++..
T Consensus 215 da~vqS~dkNF~VPvGgai~As~ 237 (389)
T PF05889_consen 215 DAFVQSTDKNFMVPVGGAIMASF 237 (389)
T ss_dssp SEEEEEHHHHHCEESSHEEEEES
T ss_pred ceeeeecCCCEEecCCCcEEEec
Confidence 88888888998888886666654
No 340
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=97.88 E-value=0.00035 Score=72.63 Aligned_cols=196 Identities=15% Similarity=0.041 Sum_probs=101.7
Q ss_pred cCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc--
Q 015609 162 FVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL-- 239 (403)
Q Consensus 162 ~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all~-- 239 (403)
+-+|+|.+++...+. ++.....+ .+......+ ..++++++++.... ...+..||++|+.++++....
T Consensus 61 h~~p~v~~ai~~~~~-~~~~~~~~--~~~~~~~~~-----la~~l~~~~~~~~~---~v~f~~sGseA~e~AlklAr~~~ 129 (427)
T TIGR00508 61 YNHPRLNAAAQKQID-KMSHVMFG--GFTHKPAIE-----LCQKLVKMTPNALD---CVFLADSGSVAVEVALKMALQYW 129 (427)
T ss_pred CCCHHHHHHHHHHHH-hcCCcccc--ccCCHHHHH-----HHHHHHhhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 447888888776653 22111111 111111122 23346667653322 234456899999999875431
Q ss_pred -----C-CCeEEecCCCCCccccccccCCccchhhhccc-------------ceEEeeeecCCCC---CCCCHHHHHHHh
Q 015609 240 -----P-GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI-------------FFESFPYKVNPQT---GYIDYEKLEEKA 297 (403)
Q Consensus 240 -----p-GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~-------------~~~vv~~~vd~~~---g~ID~d~Le~~i 297 (403)
+ ..+||+....+.|+.. + ...+.+. .....+++...-. ..-|++++++++
T Consensus 130 ~~~~~~~r~~il~~~~~yHG~t~-~-------~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l 201 (427)
T TIGR00508 130 QAKGEKNRQKFLTIRSGYHGDTF-G-------AMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLM 201 (427)
T ss_pred HhhCCCCccEEEEEcCCcCCccH-h-------hhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHH
Confidence 2 3578888876655421 0 0111110 0011111110000 012567888887
Q ss_pred ccC--CCcEEEEeC--CCC-C----ccccHHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCC
Q 015609 298 MDY--RPKILICGG--SSY-P----REWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKS 365 (403)
Q Consensus 298 ~~~--~pklViv~~--s~~-g----~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKt 365 (403)
.+. +...|++++ +.. | ....+++|+++|+++|+++|+|.+| .|+-..|.. ..-++ ..|+++ +-|.
T Consensus 202 ~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v~pDi~~--~gK~ 278 (427)
T TIGR00508 202 ELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGVVPDILC--VGKA 278 (427)
T ss_pred HhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCCCCCEEE--echh
Confidence 643 234566664 222 2 2346899999999999999999999 564333321 11122 268887 5899
Q ss_pred CcCC--ceEEEEEeCC
Q 015609 366 LRGP--RGGIIFFRRG 379 (403)
Q Consensus 366 L~GP--~GG~I~~~~~ 379 (403)
|.|- ..+.++.+++
T Consensus 279 l~gG~~p~~a~~~~~~ 294 (427)
T TIGR00508 279 LTGGYMTLSATVTTDK 294 (427)
T ss_pred hhcCcccceEEEEcHH
Confidence 8432 3455555543
No 341
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=97.87 E-value=0.00059 Score=71.67 Aligned_cols=194 Identities=16% Similarity=0.076 Sum_probs=98.5
Q ss_pred CcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cC
Q 015609 163 VCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LP 240 (403)
Q Consensus 163 ~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~p 240 (403)
-+|.|.+++...+.. +. +.+.++ .++...++ .+++++++..... ...+.+||++|+.++++... ..
T Consensus 88 ~~p~v~~Ai~~ql~~-~~--~~~~~~--~~~~~~~l----ae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~tg 155 (459)
T PRK06082 88 GHPHVIEKVKEQMAK-LP--FSPRRF--TNETAIEC----AEKLTEIAGGELN---RVLFAPGGTSAIGMALKLARHITG 155 (459)
T ss_pred CCHHHHHHHHHHHHh-CC--CccCcc--CCHHHHHH----HHHHHHhCCCCCC---EEEECCCcHHHHHHHHHHHHHhcC
Confidence 367777777666543 21 111122 12322233 3457777753322 23445689999999987542 23
Q ss_pred CCeEEecCCCCCccccccccCCccchhhhccc------------ceEEeeeecCCC--CCCCC------HHHHHHHhccC
Q 015609 241 GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI------------FFESFPYKVNPQ--TGYID------YEKLEEKAMDY 300 (403)
Q Consensus 241 GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~------------~~~vv~~~vd~~--~g~ID------~d~Le~~i~~~ 300 (403)
..+|++....+.|.. .+. +.+.+. .+..++++.... -...| ++.+++++.+.
T Consensus 156 r~~ii~~~~~yHG~t-~~a-------~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 227 (459)
T PRK06082 156 NFKVVSLWDSFHGAS-LDA-------ISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE 227 (459)
T ss_pred CCEEEEEeCCCcCcc-HHH-------HhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC
Confidence 467887765554432 111 111110 011111110000 00011 35677777532
Q ss_pred -CCcEEEEeCC-CCCc-ccc---HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCCCcCC--
Q 015609 301 -RPKILICGGS-SYPR-EWD---YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRGP-- 369 (403)
Q Consensus 301 -~pklViv~~s-~~g~-~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKtL~GP-- 369 (403)
+...||+++. ..+. ..+ +++++++|+++|++||+|.+|. |+--.|.. ..-++ ..|+++ +-|.|.|-
T Consensus 228 ~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~~ 304 (459)
T PRK06082 228 GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPN-GMGRTGEWFTHQAYGIEPDILC--IGKGLGGGLV 304 (459)
T ss_pred CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHhHhhCCCCCEEE--ecccccCCCC
Confidence 2345666542 1122 344 8999999999999999999987 43122211 01112 278887 57998652
Q ss_pred ceEEEEEeCC
Q 015609 370 RGGIIFFRRG 379 (403)
Q Consensus 370 ~GG~I~~~~~ 379 (403)
+-|+++++++
T Consensus 305 P~~av~~~~~ 314 (459)
T PRK06082 305 PIAAMITKDK 314 (459)
T ss_pred cceEEEEcHH
Confidence 2345555543
No 342
>PRK07482 hypothetical protein; Provisional
Probab=97.87 E-value=0.00031 Score=73.81 Aligned_cols=85 Identities=18% Similarity=0.156 Sum_probs=51.8
Q ss_pred CHHHHHHHhccC---CCcEEEEeCC--CCCccc-c---HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccE
Q 015609 289 DYEKLEEKAMDY---RPKILICGGS--SYPREW-D---YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDI 357 (403)
Q Consensus 289 D~d~Le~~i~~~---~pklViv~~s--~~g~~~-D---i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDi 357 (403)
+++.+++++... +...||+++. +.|.+. + +++|+++|+++|++||+|..+. +|-........-++ ..|+
T Consensus 205 ~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDi 284 (461)
T PRK07482 205 CADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDL 284 (461)
T ss_pred HHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCE
Confidence 467788877422 2455666642 223322 2 7899999999999999999976 44332111111122 2799
Q ss_pred EEEcCcCCCcC---CceEEEE
Q 015609 358 VTSTTHKSLRG---PRGGIIF 375 (403)
Q Consensus 358 vt~StHKtL~G---P~GG~I~ 375 (403)
+++ -|.|.| |-|+++.
T Consensus 285 v~~--gKgl~gG~~Pi~av~~ 303 (461)
T PRK07482 285 ITV--AKGLTSAYAPLSGSIV 303 (461)
T ss_pred EEE--ccccccCccccceeee
Confidence 985 698854 4455444
No 343
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=97.85 E-value=0.00024 Score=71.62 Aligned_cols=189 Identities=15% Similarity=0.074 Sum_probs=95.1
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-----
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL----- 238 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all----- 238 (403)
+|.+.+++...+... ...++.. + -.+...++ .+++.++++-... -..+..||++|+..+++...
T Consensus 34 ~p~i~~ai~~~~~~~-~~~~~~~--~-~~~~~~~l----a~~L~~~~p~~~~---~v~f~~sGseAve~Alkla~~~~~~ 102 (339)
T PF00202_consen 34 HPEIAEAIAEQANKL-NYVSFSG--F-THPEAAEL----AEKLAELFPGGLD---RVFFANSGSEAVEAALKLARQYHNK 102 (339)
T ss_dssp -HHHHHHHHHHHHHC-SSCSTTT--S-EEHHHHHH----HHHHHHHSSTTEE---EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHhhhc-ccccccc--e-eccchhhh----hhhhhhccccccc---eeeeccCchHHHHHHHHHhhccccc
Confidence 678888877665432 1111111 1 12222222 3357777733221 12345689999999987654
Q ss_pred ---cCCCeEEecCCCCCccccccccCCccchhhhcc---------cce-EEeeeecCCCCCCCCHHH----------HHH
Q 015609 239 ---LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAAS---------IFF-ESFPYKVNPQTGYIDYEK----------LEE 295 (403)
Q Consensus 239 ---~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g---------~~~-~vv~~~vd~~~g~ID~d~----------Le~ 295 (403)
....+|++....+.|... + .+...+ ..+ .+..++. -|+.. +++
T Consensus 103 ~~~~~r~~il~~~~~yHG~t~-~-------~~s~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~~~~~~~ 168 (339)
T PF00202_consen 103 RAYTGRRKILAFEGSYHGRTL-G-------ALSLTGNPPYRKGFGPLYPGVVFVPF------PDPAADEEEQACLNALEE 168 (339)
T ss_dssp THHHTTTEEEEETTTB-TSSH-H-------HHHHSSSTHHHTTTCSSSTTEEEEET------TCHHHHHHHHHHHHHHHH
T ss_pred ccccCCceEEEeeeeeeccCc-c-------cccccCCccccccccccccccccccC------CccchhhhHHHHHHHHHH
Confidence 234688888877655421 0 111111 000 1112221 12222 333
Q ss_pred Hhc---cCCCcEEEEeCC--CCCccc---c-HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEEEcCcC
Q 015609 296 KAM---DYRPKILICGGS--SYPREW---D-YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTSTTHK 364 (403)
Q Consensus 296 ~i~---~~~pklViv~~s--~~g~~~---D-i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~StHK 364 (403)
++. ..+...||+++- +.|... + +++|+++|+++|+++|+|.+|. +|-.........++ ..|+++++ |
T Consensus 169 ~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~g--K 246 (339)
T PF00202_consen 169 LIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFG--K 246 (339)
T ss_dssp HHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEE--G
T ss_pred HHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcccccc--c
Confidence 332 222345777653 223221 2 6999999999999999999987 43322111000111 27999987 9
Q ss_pred CCcC-CceEEEEEeCC
Q 015609 365 SLRG-PRGGIIFFRRG 379 (403)
Q Consensus 365 tL~G-P~GG~I~~~~~ 379 (403)
.|.| -+-++++++++
T Consensus 247 ~l~gG~p~sav~~~~~ 262 (339)
T PF00202_consen 247 GLGGGLPISAVLGSEE 262 (339)
T ss_dssp GGGTTSSEEEEEEEHH
T ss_pred chhhhhhcccccccch
Confidence 9854 33356666654
No 344
>PRK05965 hypothetical protein; Provisional
Probab=97.84 E-value=0.0006 Score=71.59 Aligned_cols=87 Identities=15% Similarity=0.126 Sum_probs=51.4
Q ss_pred HHHHHHhccC---CCcEEEEeCC--CCCccc-c---HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEE
Q 015609 291 EKLEEKAMDY---RPKILICGGS--SYPREW-D---YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVT 359 (403)
Q Consensus 291 d~Le~~i~~~---~pklViv~~s--~~g~~~-D---i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt 359 (403)
+.++++++.. +...||+++. +.|.+. + +++++++|+++|++||+|..+. +|-........-++ ..|+++
T Consensus 202 ~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~ 281 (459)
T PRK05965 202 AALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT 281 (459)
T ss_pred HHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEE
Confidence 5677777643 2355666642 233322 2 7899999999999999999976 44332111111112 279998
Q ss_pred EcCcCCCcCC--ceEEEEEeCC
Q 015609 360 STTHKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 360 ~StHKtL~GP--~GG~I~~~~~ 379 (403)
+ -|.|.|- +-|+++++++
T Consensus 282 ~--gKgl~gG~~Pi~av~~~~~ 301 (459)
T PRK05965 282 V--AKGLTSGYVPMGAVLMSDH 301 (459)
T ss_pred e--chhhccCCcceeEEEEcHH
Confidence 6 5887542 2344555543
No 345
>PRK06149 hypothetical protein; Provisional
Probab=97.84 E-value=0.00059 Score=77.97 Aligned_cols=199 Identities=13% Similarity=0.022 Sum_probs=99.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhh--ccCC
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGL--LLPG 241 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~al--l~pG 241 (403)
+|+|.+|+...+... ...+++. .+...++ .+++++++..... ..++++||++||.++++.. ....
T Consensus 601 hp~v~~Ai~~q~~~l----~~~~~~~--~~~~~el----ae~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~tgr 667 (972)
T PRK06149 601 HPRLAAAAARQWSLL----NTNSRFH--YAAVAEF----SERLAALAPDGLD---TVFLVNSGSEANDLAIRLAWAASGR 667 (972)
T ss_pred CHHHHHHHHHHHHhc----ccccccc--CHHHHHH----HHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHhcCC
Confidence 899999988766432 1222331 2222223 3457777732111 2355679999999999733 1223
Q ss_pred CeEEecCCCCCccccccc--cCCcc-chhhhc-c--cceEEeeeecCCCCC---CCC-----HHHHHHHhcc-----CCC
Q 015609 242 DRIMGLDSPSGGHLSHGY--HTPGG-KKVSAA-S--IFFESFPYKVNPQTG---YID-----YEKLEEKAMD-----YRP 302 (403)
Q Consensus 242 D~VL~~~~ehgghlsh~~--~~~~~-~~v~~~-g--~~~~vv~~~vd~~~g---~ID-----~d~Le~~i~~-----~~p 302 (403)
.+|++....+.|... +. +.... ...... . .++..++++ +.-.+ ..| .+++++.++. .++
T Consensus 668 ~~ii~~~~~yHG~t~-ga~~~s~~~~~~~~~~~~~~~~v~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i 745 (972)
T PRK06149 668 RDVVSVLEAYHGWTV-ATDAVSTSIADNPQALETRPDWVHPVESP-NTYRGRFRGADSAADYVRDVVAQLEELDASGRGL 745 (972)
T ss_pred CeEEEEeCCCCCcCh-hHhhhcCCccccccccCCCCCCeEEeCCC-cccCCcCCCcccHHHHHHHHHHHHHHHhhcCCce
Confidence 567777655544320 10 00000 000000 0 011111111 00000 011 2444444321 234
Q ss_pred cEEEEeC--CCCCcccc----HHHHHHHHHHcCCEEEEeccc-ccccccccccc-CCCC-cccEEEEcCcCCCcC-CceE
Q 015609 303 KILICGG--SSYPREWD----YGRFRQIADKCGAVLMCDMAH-ISGLIAAKELA-SPFD-YCDIVTSTTHKSLRG-PRGG 372 (403)
Q Consensus 303 klViv~~--s~~g~~~D----i~~I~~Iake~Ga~LivDaAh-~~Glia~g~~~-~p~~-~aDivt~StHKtL~G-P~GG 372 (403)
..||+++ ++.|.+.+ +++++++|+++|+++|+|.+| ++|-......- .-++ ..|+++ +-|.|+| -+.|
T Consensus 746 AavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt--~gK~lg~G~Pl~ 823 (972)
T PRK06149 746 AGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIIT--MAKGMGNGHPLG 823 (972)
T ss_pred EEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEE--ecccccCCeeeE
Confidence 5566653 23355556 899999999999999999999 46554321100 0011 278885 5799864 2336
Q ss_pred EEEEeCC
Q 015609 373 IIFFRRG 379 (403)
Q Consensus 373 ~I~~~~~ 379 (403)
+++++++
T Consensus 824 av~~~~~ 830 (972)
T PRK06149 824 AVITRRE 830 (972)
T ss_pred EEEEcHH
Confidence 6666654
No 346
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=97.84 E-value=0.00092 Score=69.21 Aligned_cols=167 Identities=14% Similarity=0.050 Sum_probs=84.4
Q ss_pred HHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchhhh-ccc-----ceEE
Q 015609 205 RALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSA-ASI-----FFES 276 (403)
Q Consensus 205 rla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~-~g~-----~~~v 276 (403)
+++++.+..... ..++.+||++|+..++.... ....+|++....|.|... +...-.+..... .+. .+..
T Consensus 92 ~l~~~~~~~~~~--~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (425)
T PRK08088 92 KMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTH-YTLALTGKVNPYSAGMGLMPGHVYR 168 (425)
T ss_pred HHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccH-HHHHhhCCCCccccCCCCCCCCcEE
Confidence 355666543210 24566799999998876542 233456666655544321 000000000000 000 0111
Q ss_pred eeeecCCCCCCCC----HHHHHHHhcc----CCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEeccccccc
Q 015609 277 FPYKVNPQTGYID----YEKLEEKAMD----YRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGL 342 (403)
Q Consensus 277 v~~~vd~~~g~ID----~d~Le~~i~~----~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Gl 342 (403)
.+++.+. ++ ++ ++++++++.. .+...|++++. +-|...+ +++|.++|+++|+++++|.+|. |+
T Consensus 169 ~~~p~~~-~~-~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~ 245 (425)
T PRK08088 169 ALYPCPL-HG-VSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GA 245 (425)
T ss_pred cCCCccc-cC-ccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CC
Confidence 2222221 11 22 5568888752 23456676643 2233333 8899999999999999999987 33
Q ss_pred cccccccC--CCC-cccEEEEcCcCCCc-CCceEEEEEeCC
Q 015609 343 IAAKELAS--PFD-YCDIVTSTTHKSLR-GPRGGIIFFRRG 379 (403)
Q Consensus 343 ia~g~~~~--p~~-~aDivt~StHKtL~-GP~GG~I~~~~~ 379 (403)
...+.... ..+ ..|+ .|+.|+|. |-+-|+++.+++
T Consensus 246 g~~g~~~~~~~~~~~pdi--~s~sK~l~~G~rig~v~~~~~ 284 (425)
T PRK08088 246 GRTGTLFAMEQMGVAADL--TTFAKSIAGGFPLAGVTGRAE 284 (425)
T ss_pred CcCcchhHHhhcCCCCCE--EEEeccccCCCcceeeEecHH
Confidence 22221110 111 1454 56689984 223477887654
No 347
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.84 E-value=0.00045 Score=72.46 Aligned_cols=163 Identities=13% Similarity=0.073 Sum_probs=86.4
Q ss_pred HHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-------cC-CCeEEecCCCCCccccccccCCccchhhhccc---
Q 015609 204 ERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL-------LP-GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI--- 272 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~~~SGT~An~aal~all-------~p-GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~--- 272 (403)
++++++++.... ...+.+||++|+.++++... .+ ..+|++....|.|... + .+++.+.
T Consensus 104 e~L~~~~p~~~~---~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~-g-------als~~~~~~~ 172 (453)
T PRK06943 104 ERLAALTGGTLG---HAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETI-G-------ALGVTDVALF 172 (453)
T ss_pred HHHHHhCCCCCC---EEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcH-H-------hhcccCChhh
Confidence 456667664321 22445689999999987652 12 3578888766644320 0 0111110
Q ss_pred ---------ceEEeeeecCCC--CC-------CCCHHHHHHHhccC--CCcEEEEeCC---CCCccc-c---HHHHHHHH
Q 015609 273 ---------FFESFPYKVNPQ--TG-------YIDYEKLEEKAMDY--RPKILICGGS---SYPREW-D---YGRFRQIA 325 (403)
Q Consensus 273 ---------~~~vv~~~vd~~--~g-------~ID~d~Le~~i~~~--~pklViv~~s---~~g~~~-D---i~~I~~Ia 325 (403)
.+..++++-... .+ .-+++++++++..+ +...||+++- +.|... | +++++++|
T Consensus 173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc 252 (453)
T PRK06943 173 KDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALC 252 (453)
T ss_pred hcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHH
Confidence 011122211000 00 12357778777543 3455676651 233322 2 78999999
Q ss_pred HHcCCEEEEecccc-ccccccccccCCCC-cccEEEEcCcCCCcCC--ceEEEEEeCC
Q 015609 326 DKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTSTTHKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 326 ke~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~StHKtL~GP--~GG~I~~~~~ 379 (403)
+++|++||+|..|. +|-........-++ ..|++++ -|.|.|- +-|+++++++
T Consensus 253 ~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~--gKgl~gG~~Pi~av~~~~e 308 (453)
T PRK06943 253 DRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCL--SKGISGGYLPLSLVLSRDA 308 (453)
T ss_pred HHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEee--ehhhccCcccceEEEEcHH
Confidence 99999999999975 44332111111122 2799987 5887542 3355555554
No 348
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=97.81 E-value=0.00048 Score=70.43 Aligned_cols=148 Identities=22% Similarity=0.208 Sum_probs=96.1
Q ss_pred eEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCC-CCCHHHHHHHhc
Q 015609 220 NVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTG-YIDYEKLEEKAM 298 (403)
Q Consensus 220 ~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g-~ID~d~Le~~i~ 298 (403)
.|...++|.||.++...|..|||.-+++.+-|+|.-- .+... -+++++++.+...++ .|+.+++|+++.
T Consensus 149 ~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdr---------dl~~r-Tgveivpv~c~Ss~~f~itv~alE~A~~ 218 (471)
T KOG0256|consen 149 VVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDR---------DLRWR-TGVEIVPVHCSSSNGFQITVEALEAALN 218 (471)
T ss_pred eEEecccchhhHHHHHHhcCCCceeeecCCCCCcccc---------cceec-cCceEEEEEeecCCCccccHHHHHHHHH
Confidence 4556678999999999999999999999888877532 22221 236777777665544 799999998876
Q ss_pred c-----CCCc-EEEEeCCC-CCcccc---HHHHHHHHHHcCCEEEEecccccccccc-ccccCCC----------CcccE
Q 015609 299 D-----YRPK-ILICGGSS-YPREWD---YGRFRQIADKCGAVLMCDMAHISGLIAA-KELASPF----------DYCDI 357 (403)
Q Consensus 299 ~-----~~pk-lViv~~s~-~g~~~D---i~~I~~Iake~Ga~LivDaAh~~Glia~-g~~~~p~----------~~aDi 357 (403)
+ .+.| +|+++++| .|...+ +..+...|.++++.+++|..-+ |.+.. ..+.+.+ +.++
T Consensus 219 ~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya-~sVF~~~~F~Sv~ev~~~~~~~~~rvH- 296 (471)
T KOG0256|consen 219 QARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYA-GSVFDKSEFRSVLEVRKDPHLDPDRVH- 296 (471)
T ss_pred HHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhc-ccccCccCceEHHHHhhccccCCCcEE-
Confidence 4 1233 45555554 455555 4455667789999999999844 43332 2111111 1133
Q ss_pred EEEcCcCCC--cCCceEEEEEeCC
Q 015609 358 VTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 358 vt~StHKtL--~GP~GG~I~~~~~ 379 (403)
++-|+.|=| +|-+-|+|++.++
T Consensus 297 ivyslSKD~GlpGfRvGviYS~ne 320 (471)
T KOG0256|consen 297 IVYSLSKDFGLPGFRVGVIYSNNE 320 (471)
T ss_pred EEEEeccccCCCceEEEEEEecCh
Confidence 345777865 3444499998776
No 349
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=97.81 E-value=0.00027 Score=73.56 Aligned_cols=169 Identities=15% Similarity=0.041 Sum_probs=86.3
Q ss_pred HHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-------cCCCeEEecCCCCCccccccccCCccchhh----hccc
Q 015609 204 ERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL-------LPGDRIMGLDSPSGGHLSHGYHTPGGKKVS----AASI 272 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~~~SGT~An~aal~all-------~pGD~VL~~~~ehgghlsh~~~~~~~~~v~----~~g~ 272 (403)
+++++++..... ...+.+||++|+.++++... ....+|++....|.|.. .+.+...+.... ....
T Consensus 93 ~~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t-~~a~s~~~~~~~~~~~~~~~ 168 (428)
T PRK07986 93 RKLVAMTPQPLE---CVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDT-FGAMSVCDPDNSMHSLYKGY 168 (428)
T ss_pred HHHHhhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCc-HhhhcccCCchhhhhccCCC
Confidence 346666653222 22445689999999987543 12467888876654432 111000000000 0000
Q ss_pred --ceEEeeeecCCCC---CCCCHHHHHHHhccC--CCcEEEEeC--C-CCCcc----ccHHHHHHHHHHcCCEEEEeccc
Q 015609 273 --FFESFPYKVNPQT---GYIDYEKLEEKAMDY--RPKILICGG--S-SYPRE----WDYGRFRQIADKCGAVLMCDMAH 338 (403)
Q Consensus 273 --~~~vv~~~vd~~~---g~ID~d~Le~~i~~~--~pklViv~~--s-~~g~~----~Di~~I~~Iake~Ga~LivDaAh 338 (403)
.+..++++..... ...|+++++++++.. +...|++++ . ..+.. .-+++|+++|+++|++||+|.+|
T Consensus 169 ~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~ 248 (428)
T PRK07986 169 LPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA 248 (428)
T ss_pred CCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 0111111100000 124677888888643 234566654 2 22321 23899999999999999999999
Q ss_pred cccccccccc--cCCCC-cccEEEEcCcCCCcCC--ceEEEEEeCC
Q 015609 339 ISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 339 ~~Glia~g~~--~~p~~-~aDivt~StHKtL~GP--~GG~I~~~~~ 379 (403)
.|+-..|.. ..-++ ..|+++ +-|.|.|- +.|+++++++
T Consensus 249 -tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~gG~~p~~av~~~~~ 291 (428)
T PRK07986 249 -TGFGRTGKLFACEHAGIAPDILC--LGKALTGGTMTLSATLTTRE 291 (428)
T ss_pred -cCCccCCCeeeecccCCCCCEEE--echhhhCCcccCcchhchHH
Confidence 665222221 11112 268885 67988532 2344455543
No 350
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=97.80 E-value=0.00063 Score=70.80 Aligned_cols=88 Identities=17% Similarity=0.103 Sum_probs=57.0
Q ss_pred CCHHHHHHHhccC--CCcEEEEeCCCCCc---cccHHHHHHHHHHcCCEEEEecccccccccccc-ccCCCC-cccEEEE
Q 015609 288 IDYEKLEEKAMDY--RPKILICGGSSYPR---EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKE-LASPFD-YCDIVTS 360 (403)
Q Consensus 288 ID~d~Le~~i~~~--~pklViv~~s~~g~---~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~-~~~p~~-~aDivt~ 360 (403)
.|++++++++++. +...|++++ .++. ...+++|.++|+++|++||+|.+| .|+...+. ...-++ ..|+++
T Consensus 172 ~d~~~l~~~l~~~~~~~aavi~Ep-v~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi~t- 248 (431)
T PRK06209 172 NDIASLEALFEDHPGRIACVILEP-ATADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDLSC- 248 (431)
T ss_pred CCHHHHHHHHHhCCCCEEEEEEcc-ccCCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcceee-
Confidence 4889999988643 234566653 4443 334899999999999999999999 67632211 111111 267755
Q ss_pred cCcCCCcC-CceEEEEEeCC
Q 015609 361 TTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 361 StHKtL~G-P~GG~I~~~~~ 379 (403)
+-|.|.| -++|+++++++
T Consensus 249 -~gK~lggG~p~~av~~~~~ 267 (431)
T PRK06209 249 -FGKALGNGFAVSALAGKRE 267 (431)
T ss_pred -ehhhhcCCcccEEEEEHHH
Confidence 5799865 23567777654
No 351
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=97.78 E-value=0.0016 Score=67.51 Aligned_cols=163 Identities=13% Similarity=0.029 Sum_probs=87.7
Q ss_pred HHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchhhhccc---------
Q 015609 204 ERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI--------- 272 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~--------- 272 (403)
+++++++...... ..++.+||++|+.++++... ....+|++....+.|... +. +++.+.
T Consensus 90 ~~l~~~~p~~~~~--~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~-~~-------~s~t~~~~~~~~~~~ 159 (421)
T PRK06777 90 ERINALAPIDGPA--KTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTL-LT-------MALTGKVAPYKVGFG 159 (421)
T ss_pred HHHHHhCCCCCCc--eEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccH-HH-------HhhcCCCcccccCCC
Confidence 3466666431100 23556799999999987542 233568887766544421 11 111110
Q ss_pred ----ceEEeeeecCCC--CCCCCHHHHHHHhcc----CCCcEEEEeCC--CCCc-ccc---HHHHHHHHHHcCCEEEEec
Q 015609 273 ----FFESFPYKVNPQ--TGYIDYEKLEEKAMD----YRPKILICGGS--SYPR-EWD---YGRFRQIADKCGAVLMCDM 336 (403)
Q Consensus 273 ----~~~vv~~~vd~~--~g~ID~d~Le~~i~~----~~pklViv~~s--~~g~-~~D---i~~I~~Iake~Ga~LivDa 336 (403)
.+..++++-... ....+++.+++++.+ .+...|++++. ..|. +.+ +++|+++|+++|+++|+|.
T Consensus 160 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 239 (421)
T PRK06777 160 PFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADE 239 (421)
T ss_pred CCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 011111110000 011246678887753 23455666542 2232 334 8999999999999999999
Q ss_pred ccccccccccccc--CCCC-cccEEEEcCcCCCc-CCceEEEEEeCC
Q 015609 337 AHISGLIAAKELA--SPFD-YCDIVTSTTHKSLR-GPRGGIIFFRRG 379 (403)
Q Consensus 337 Ah~~Glia~g~~~--~p~~-~aDivt~StHKtL~-GP~GG~I~~~~~ 379 (403)
+|. |+...+... ..++ ..|++ ++.|.+. |-+.|+++++++
T Consensus 240 v~t-g~gr~g~~~~~~~~~~~pDiv--~~sK~l~~G~pigav~~~~~ 283 (421)
T PRK06777 240 VQT-GFARTGKLFAMEYYDVKPDLI--TMAKSLGGGMPISAVVGRAE 283 (421)
T ss_pred hhh-CCccCCchhhhhhcCCCCCEE--eeehhhcCCCceEEEEEcHH
Confidence 987 543333211 1112 26776 4689885 334577777654
No 352
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=97.76 E-value=0.00048 Score=69.12 Aligned_cols=149 Identities=17% Similarity=0.156 Sum_probs=83.5
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCh-HHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee
Q 015609 202 CFERALKAFDLDSDNWGVNVQPYSC-TSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK 280 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~~SG-T~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~ 280 (403)
.++.+++++|....+ +|+.++| ++++.++ ..++++|| |++..+.+.+.. ..+...| .+++.++
T Consensus 58 L~~~ia~~~~~~~~~---~I~i~~Gs~e~i~~l-~~~~~~g~-v~v~~P~y~~y~---------~~~~~~g--~~~~~v~ 121 (339)
T PRK06959 58 LAACAARYYGAPDAA---HVLPVAGSQAAIRAL-PALLPRGR-VGIAPLAYSEYA---------PAFARHG--HRVVPLD 121 (339)
T ss_pred HHHHHHHHhCCCCcc---cEEECcCHHHHHHHH-HHhcCCCe-EEEcCCCcHHHH---------HHHHHCC--CEEEeec
Confidence 356789999996421 4666665 4566644 45678887 776665543321 1223334 3445544
Q ss_pred cCCCCCCCCHHHHHHHhccCCCcEEEEeCCCC--CccccHHHHHHH---HHHcCCEEEEeccccccccccccccCCCCcc
Q 015609 281 VNPQTGYIDYEKLEEKAMDYRPKILICGGSSY--PREWDYGRFRQI---ADKCGAVLMCDMAHISGLIAAKELASPFDYC 355 (403)
Q Consensus 281 vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~--g~~~Di~~I~~I---ake~Ga~LivDaAh~~Glia~g~~~~p~~~a 355 (403)
.+. +.+.+ ..+++++..+++ |...+.+++.++ |++++.++++|.+..-. ....-...-.+.-
T Consensus 122 ~~~-------~~~~~-----~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~-~~~~s~~~~~~~~ 188 (339)
T PRK06959 122 EAA-------DTLPA-----ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADT-LPAASLAAHTDRP 188 (339)
T ss_pred ccc-------hhccc-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccC-CCcccchhccCCC
Confidence 331 22221 235555554444 567776666655 55779999999986642 2110000000111
Q ss_pred c-EEEEcCcCCC--cCCceEEEEEeCC
Q 015609 356 D-IVTSTTHKSL--RGPRGGIIFFRRG 379 (403)
Q Consensus 356 D-ivt~StHKtL--~GP~GG~I~~~~~ 379 (403)
+ +++.|+.|.+ .|-|-|+++++.+
T Consensus 189 ~vi~l~SfSK~~gl~GlRiGy~v~~~~ 215 (339)
T PRK06959 189 GLVVLRSVGKFFGLAGVRAGFVLAAPA 215 (339)
T ss_pred CEEEEecChhhcCCcchheEEEecCHH
Confidence 1 6788999986 3455599998654
No 353
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.75 E-value=0.00047 Score=71.81 Aligned_cols=169 Identities=14% Similarity=0.021 Sum_probs=86.2
Q ss_pred HHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhcc-------C-CCeEEecCCCCCccccccccCCccchhhhcc----
Q 015609 204 ERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLL-------P-GDRIMGLDSPSGGHLSHGYHTPGGKKVSAAS---- 271 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~~~SGT~An~aal~all~-------p-GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g---- 271 (403)
+++++++..... ...+.+||++|+.++++.... + ..+|++....+.|... +.+.-.+......+
T Consensus 94 e~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~-~a~s~~~~~~~~~~~~~~ 169 (429)
T PRK06173 94 QKLLEILPPSLN---KIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTW-HAMSVCDPVTGMHGLFNH 169 (429)
T ss_pred HHHHhhCCCCcC---EEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcch-hhhccCCCchhhhhcccc
Confidence 446666642221 124456899999999875431 2 3568888766655321 11000000000000
Q ss_pred --cceEEeeeecCCCC---CCCCHHHHHHHhccC--CCcEEEEeCC---CCCcc-cc---HHHHHHHHHHcCCEEEEecc
Q 015609 272 --IFFESFPYKVNPQT---GYIDYEKLEEKAMDY--RPKILICGGS---SYPRE-WD---YGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 272 --~~~~vv~~~vd~~~---g~ID~d~Le~~i~~~--~pklViv~~s---~~g~~-~D---i~~I~~Iake~Ga~LivDaA 337 (403)
.....++++..... ...+++.|++.+..+ +...|++++- +.|.. .+ +++++++|+++|++||+|.+
T Consensus 170 ~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv 249 (429)
T PRK06173 170 SLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEI 249 (429)
T ss_pred cCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecch
Confidence 00111222110000 012466777877533 3455666652 22322 22 78999999999999999999
Q ss_pred ccccccccccc--cCCCC-cccEEEEcCcCCCcC--CceEEEEEeCC
Q 015609 338 HISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRG--PRGGIIFFRRG 379 (403)
Q Consensus 338 h~~Glia~g~~--~~p~~-~aDivt~StHKtL~G--P~GG~I~~~~~ 379 (403)
| .|+-..|.. ..-++ ..|+++ +-|.|.| ...+.++.+++
T Consensus 250 ~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG~~p~~a~~~~~~ 293 (429)
T PRK06173 250 A-TGFGRTGKLFALEHAGVVPDIMC--IGKALTGGYLTLSATITTEA 293 (429)
T ss_pred h-cCCCcCCcchHHHhcCCCCCEEE--eehhhhCCccccceEEecHH
Confidence 9 775222321 11122 268887 6798853 23455555543
No 354
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=97.75 E-value=0.0013 Score=68.76 Aligned_cols=60 Identities=15% Similarity=0.129 Sum_probs=38.1
Q ss_pred HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015609 318 YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 318 i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
+++|+++|+++|+++|+|.+|. +|-.........++ ..|+++ +-|.|.| -+-|+++.+++
T Consensus 229 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~G~Pigav~~~~~ 291 (442)
T TIGR00709 229 LQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--MSKAVGGGLPLAVLLIAPE 291 (442)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--EcccccCCcccEEEEEchH
Confidence 8899999999999999999976 33222111001122 268888 5798854 22356666554
No 355
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.74 E-value=0.00032 Score=72.83 Aligned_cols=85 Identities=19% Similarity=0.074 Sum_probs=53.0
Q ss_pred HHHHHHhccCCCcEEEEeCC---CCCc----cccHHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEE
Q 015609 291 EKLEEKAMDYRPKILICGGS---SYPR----EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTS 360 (403)
Q Consensus 291 d~Le~~i~~~~pklViv~~s---~~g~----~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~ 360 (403)
+.+++++. .+...||+++- ..|. .-.+++++++|+++|+++|+|.+| .|+-..|.. ...++ ..|+++
T Consensus 191 ~~~~~~~~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi~t- 267 (422)
T PRK05630 191 RSLELLID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA-TGFGRTGELFATLAAGVTPDIMC- 267 (422)
T ss_pred HHHHHHHh-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecce-eCCCcCchhhHHHhcCCCCCeee-
Confidence 34455554 34566777652 2232 234889999999999999999998 554222211 01111 268884
Q ss_pred cCcCCCcC--CceEEEEEeCC
Q 015609 361 TTHKSLRG--PRGGIIFFRRG 379 (403)
Q Consensus 361 StHKtL~G--P~GG~I~~~~~ 379 (403)
+-|.|.| ++.|+++++++
T Consensus 268 -~gK~l~gG~~p~~av~~~~~ 287 (422)
T PRK05630 268 -VGKALTGGFMSFAATLCTDK 287 (422)
T ss_pred -eechhhcCccccceeeccHH
Confidence 5799954 66777777764
No 356
>PRK07481 hypothetical protein; Provisional
Probab=97.74 E-value=0.0012 Score=69.25 Aligned_cols=74 Identities=16% Similarity=0.153 Sum_probs=45.0
Q ss_pred CcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEEEcCcCCCcC---Cc
Q 015609 302 PKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTSTTHKSLRG---PR 370 (403)
Q Consensus 302 pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~StHKtL~G---P~ 370 (403)
...||+++- +.|...+ +++++++|+++|++||+|..|. +|-........-++ ..|++++ -|.|.| |-
T Consensus 214 iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~gG~~Pi 291 (449)
T PRK07481 214 IAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCL--AKGITSGYVPL 291 (449)
T ss_pred EEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEE--eecccCCCcCc
Confidence 456677642 2233332 8999999999999999999976 33322111111122 2788886 698865 44
Q ss_pred eEEEEEeC
Q 015609 371 GGIIFFRR 378 (403)
Q Consensus 371 GG~I~~~~ 378 (403)
|+ +++++
T Consensus 292 ~a-v~~~~ 298 (449)
T PRK07481 292 GA-TMVNA 298 (449)
T ss_pred eE-EEEcH
Confidence 44 55554
No 357
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.71 E-value=0.0007 Score=71.26 Aligned_cols=154 Identities=16% Similarity=0.086 Sum_probs=79.3
Q ss_pred Ee-CChHHHHHHHHhhhc--cCCCeEEecCCCCCccccccccCCccchh---hhcc--cceEEeeeecCCC---C-----
Q 015609 222 QP-YSCTSANFAVYTGLL--LPGDRIMGLDSPSGGHLSHGYHTPGGKKV---SAAS--IFFESFPYKVNPQ---T----- 285 (403)
Q Consensus 222 ~~-~SGT~An~aal~all--~pGD~VL~~~~ehgghlsh~~~~~~~~~v---~~~g--~~~~vv~~~vd~~---~----- 285 (403)
++ .||++|+.++++... ....+|+.....|.|... +.+.-.+... ...+ ..+..++++.+.. .
T Consensus 131 f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~-~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 209 (464)
T PRK06938 131 FCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQ-GALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEA 209 (464)
T ss_pred EeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccH-HHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhh
Confidence 44 589999999987542 234578887766544421 1000000000 0000 0112223221100 0
Q ss_pred -CCCCHHHHHHHhccC-----CCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCC
Q 015609 286 -GYIDYEKLEEKAMDY-----RPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPF 352 (403)
Q Consensus 286 -g~ID~d~Le~~i~~~-----~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~ 352 (403)
...+.+.+++++.+. +...||+++- ..|.+.+ +++++++|+++|++||+|..|. +|-........-+
T Consensus 210 ~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~ 289 (464)
T PRK06938 210 GVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHA 289 (464)
T ss_pred HHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhc
Confidence 002367788888642 2455666642 2233222 7899999999999999999976 3332211111112
Q ss_pred C-cccEEEEcCcCCCcC--CceEEEEEeCC
Q 015609 353 D-YCDIVTSTTHKSLRG--PRGGIIFFRRG 379 (403)
Q Consensus 353 ~-~aDivt~StHKtL~G--P~GG~I~~~~~ 379 (403)
+ ..|++++ -|.|.| |- |+++.+++
T Consensus 290 gv~PDiv~~--gKglggG~Pl-sAv~~~~~ 316 (464)
T PRK06938 290 GIIPDVVVL--SKAIGGSLPL-AVVVYREW 316 (464)
T ss_pred CCCCCEEEe--eccccCCCce-EEEeehhH
Confidence 2 2799986 588854 33 55555543
No 358
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.70 E-value=0.0013 Score=67.99 Aligned_cols=87 Identities=15% Similarity=0.020 Sum_probs=52.0
Q ss_pred HHHHHHHhc--c--CCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEecccccccccccccc--CCCC-ccc
Q 015609 290 YEKLEEKAM--D--YRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPFD-YCD 356 (403)
Q Consensus 290 ~d~Le~~i~--~--~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~~-~aD 356 (403)
++.+++++. . .+...||+++- +.|...+ +++|+++|+++|+++|+|.++. |+...+... ..++ ..|
T Consensus 182 ~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-g~gr~g~~~a~~~~~~~pD 260 (420)
T TIGR00700 182 LAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQT-GFARTGAMFACEHEGPEPD 260 (420)
T ss_pred HHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccchhHHHhhcCCCCC
Confidence 456777663 1 23355666532 2343333 8999999999999999999975 332222110 1122 268
Q ss_pred EEEEcCcCCCc-CCceEEEEEeCC
Q 015609 357 IVTSTTHKSLR-GPRGGIIFFRRG 379 (403)
Q Consensus 357 ivt~StHKtL~-GP~GG~I~~~~~ 379 (403)
+++ +.|.|. |-+-|+++.+++
T Consensus 261 i~~--lsK~l~~G~pig~v~~~~~ 282 (420)
T TIGR00700 261 LIT--TAKSLADGLPLSGVTGRAE 282 (420)
T ss_pred EEE--eeccccCCcceEEEEecHH
Confidence 766 689885 333477777654
No 359
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.70 E-value=0.00076 Score=70.86 Aligned_cols=163 Identities=18% Similarity=0.143 Sum_probs=85.2
Q ss_pred HHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-------cC-CCeEEecCCCCCccccccccCCccchhhhccc--
Q 015609 203 FERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL-------LP-GDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI-- 272 (403)
Q Consensus 203 rerla~lfg~~~~~~~v~V~~~SGT~An~aal~all-------~p-GD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~-- 272 (403)
.+++++++..... ...+.+||++|+.++++... .+ ..+|++....|.|... + .+++.+.
T Consensus 105 ae~L~~~~p~~~~---~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~-~-------als~s~~~~ 173 (460)
T PRK06916 105 AEKLIEVVPEGLK---KVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTI-G-------AVSVGAIDL 173 (460)
T ss_pred HHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccH-H-------hHhccCCcc
Confidence 3456677653322 23455689999999987543 13 3578888766544321 1 1111110
Q ss_pred ----------ceEEeeeec--C-CCCC------CCCHHHHHHHhccC--CCcEEEEeCC---CCCccc-c---HHHHHHH
Q 015609 273 ----------FFESFPYKV--N-PQTG------YIDYEKLEEKAMDY--RPKILICGGS---SYPREW-D---YGRFRQI 324 (403)
Q Consensus 273 ----------~~~vv~~~v--d-~~~g------~ID~d~Le~~i~~~--~pklViv~~s---~~g~~~-D---i~~I~~I 324 (403)
.+..++++- . +..+ .-+++.++++++.. +...|++++. +.|.+. + +++++++
T Consensus 174 ~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~l 253 (460)
T PRK06916 174 FHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNL 253 (460)
T ss_pred cccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHH
Confidence 011122110 0 0000 12356777777543 3455677651 233322 2 7899999
Q ss_pred HHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCCCcCC--ceEEEEEeCC
Q 015609 325 ADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 325 ake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKtL~GP--~GG~I~~~~~ 379 (403)
|+++|++||+|.+|. |+--.|.. ...++ ..|++++ -|.|.|- +-|+++.+++
T Consensus 254 c~~~g~llI~DEV~T-G~GRtG~~~a~~~~gv~PDiv~~--gK~l~gG~~Pi~av~~~~e 310 (460)
T PRK06916 254 CTKYNVLFITDEVAT-GFGRTGKMFACEHENVTPDIMTA--GKGLTGGYLPIAITVTTDE 310 (460)
T ss_pred HHHcCCEEEeechhh-CCCcCchhhHHHhcCCCCCeeee--ehhhhcCccccceeeecHH
Confidence 999999999999984 33112211 11112 2788864 6887532 2344555543
No 360
>PRK06917 hypothetical protein; Provisional
Probab=97.70 E-value=0.0011 Score=69.29 Aligned_cols=87 Identities=16% Similarity=0.108 Sum_probs=52.7
Q ss_pred HHHHHHHhccC---CCcEEEEeCCC--CC-cccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-ccc
Q 015609 290 YEKLEEKAMDY---RPKILICGGSS--YP-REWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCD 356 (403)
Q Consensus 290 ~d~Le~~i~~~---~pklViv~~s~--~g-~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aD 356 (403)
++.++++++++ +...||+++.. .+ .+.+ +++++++|+++|+++|+|.+|. |+--.|.. ..-++ ..|
T Consensus 185 ~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv~PD 263 (447)
T PRK06917 185 ATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGVEPD 263 (447)
T ss_pred HHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCCCCC
Confidence 46777777643 24566776531 22 2222 7899999999999999999986 53222211 11122 268
Q ss_pred EEEEcCcCCCcCC--ceEEEEEeCC
Q 015609 357 IVTSTTHKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 357 ivt~StHKtL~GP--~GG~I~~~~~ 379 (403)
++++ -|.|.|- +.|+++++++
T Consensus 264 i~~~--gK~l~~G~~Pi~a~~~~~~ 286 (447)
T PRK06917 264 IMTL--GKGLGAGYTPIAATVVSDR 286 (447)
T ss_pred EEEe--eehhccCCcceEEEEEcHH
Confidence 8765 7998652 3455555543
No 361
>PRK07036 hypothetical protein; Provisional
Probab=97.66 E-value=0.0013 Score=69.19 Aligned_cols=86 Identities=20% Similarity=0.227 Sum_probs=51.6
Q ss_pred HHHHHHhcc---CCCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEecccc-cccccc-ccccCCCC-cccEE
Q 015609 291 EKLEEKAMD---YRPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAA-KELASPFD-YCDIV 358 (403)
Q Consensus 291 d~Le~~i~~---~~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~-g~~~~p~~-~aDiv 358 (403)
+.+++.+.. .+...||+++. +.|...+ +++|+++|+++|+++|+|.+|. +|-... .....-++ ..|++
T Consensus 207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDiv 286 (466)
T PRK07036 207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDII 286 (466)
T ss_pred HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEE
Confidence 445555542 23456777642 2344444 8999999999999999999984 544321 01111122 26888
Q ss_pred EEcCcCCCcC---CceEEEEEeCC
Q 015609 359 TSTTHKSLRG---PRGGIIFFRRG 379 (403)
Q Consensus 359 t~StHKtL~G---P~GG~I~~~~~ 379 (403)
++ -|.|.| |- |+++++++
T Consensus 287 t~--gK~l~gG~~Pi-~av~~~~~ 307 (466)
T PRK07036 287 TF--AKGLTSGYQPL-GAVIISER 307 (466)
T ss_pred EE--ccccccCcccc-EEEEEcHH
Confidence 75 698865 44 44555543
No 362
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.65 E-value=0.0011 Score=68.87 Aligned_cols=85 Identities=19% Similarity=0.117 Sum_probs=51.6
Q ss_pred HHHHHHHhccC--CCcEEEEeCC--CCCcc----ccHHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEE
Q 015609 290 YEKLEEKAMDY--RPKILICGGS--SYPRE----WDYGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVT 359 (403)
Q Consensus 290 ~d~Le~~i~~~--~pklViv~~s--~~g~~----~Di~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt 359 (403)
++++++.+..+ ++..||+++. +.|.. --+++|+++|+++|++|++|.+|. +|..........++ ..|+++
T Consensus 205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~ 284 (431)
T TIGR03251 205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA 284 (431)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEE
Confidence 45566666532 3456677642 22322 358999999999999999999998 44321110111122 379987
Q ss_pred EcCcCCCcCCceEEEEEeC
Q 015609 360 STTHKSLRGPRGGIIFFRR 378 (403)
Q Consensus 360 ~StHKtL~GP~GG~I~~~~ 378 (403)
+ -|.+ |.+|++..++
T Consensus 285 ~--gK~~--~~~g~~~~~~ 299 (431)
T TIGR03251 285 F--GKKT--QVCGIMAGRR 299 (431)
T ss_pred e--cccC--ccceEEecch
Confidence 5 5655 6677776543
No 363
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.60 E-value=0.0012 Score=69.43 Aligned_cols=88 Identities=14% Similarity=0.114 Sum_probs=53.0
Q ss_pred HHHHHHHhccC--CCcEEEEeC-C--CCCccc----cHHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEE
Q 015609 290 YEKLEEKAMDY--RPKILICGG-S--SYPREW----DYGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIV 358 (403)
Q Consensus 290 ~d~Le~~i~~~--~pklViv~~-s--~~g~~~----Di~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDiv 358 (403)
++.+++++.+. +...||+++ . +.|.+. =+++++++|+++|++||+|..|. +|-.........++ ..|++
T Consensus 201 l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv 280 (466)
T PRK07030 201 FAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFL 280 (466)
T ss_pred HHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEE
Confidence 56677777543 235567665 1 233322 27899999999999999999975 44332111111112 27999
Q ss_pred EEcCcCCCcCC--ceEEEEEeCC
Q 015609 359 TSTTHKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 359 t~StHKtL~GP--~GG~I~~~~~ 379 (403)
++ -|.|.|- +-|+++.+++
T Consensus 281 ~~--gKgl~gG~~Pi~av~~~~e 301 (466)
T PRK07030 281 CL--SKALTGGYLPLAAVLTTDT 301 (466)
T ss_pred ee--ehhccCCcccceEEEecHH
Confidence 87 5888542 3455555554
No 364
>PRK07483 hypothetical protein; Provisional
Probab=97.60 E-value=0.0013 Score=68.76 Aligned_cols=87 Identities=18% Similarity=0.187 Sum_probs=50.5
Q ss_pred HHHHHHhcc---CCCcEEEEeCCC---CCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEE
Q 015609 291 EKLEEKAMD---YRPKILICGGSS---YPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIV 358 (403)
Q Consensus 291 d~Le~~i~~---~~pklViv~~s~---~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDiv 358 (403)
+++++++.. .+...||+++-. .|...+ +++++++|+++|+++|+|..|. +|-........-++ ..|++
T Consensus 186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv 265 (443)
T PRK07483 186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLV 265 (443)
T ss_pred HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCee
Confidence 566765542 223456766431 233322 8999999999999999999987 43322111111112 26888
Q ss_pred EEcCcCCCcCC--ceEEEEEeCC
Q 015609 359 TSTTHKSLRGP--RGGIIFFRRG 379 (403)
Q Consensus 359 t~StHKtL~GP--~GG~I~~~~~ 379 (403)
++ -|.|.|- +-|+++++++
T Consensus 266 ~~--gK~l~gG~~Pi~av~~~~~ 286 (443)
T PRK07483 266 TI--AKGLGAGYQPIGAVLASDR 286 (443)
T ss_pred ee--hhhhccCccccEEEEEcHH
Confidence 86 6888532 2355555543
No 365
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=97.60 E-value=0.0013 Score=69.02 Aligned_cols=75 Identities=13% Similarity=0.137 Sum_probs=46.7
Q ss_pred CcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cCCCC-cccEEEEcCcCCCcCCc-e
Q 015609 302 PKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--ASPFD-YCDIVTSTTHKSLRGPR-G 371 (403)
Q Consensus 302 pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~p~~-~aDivt~StHKtL~GP~-G 371 (403)
...||+++- +.|...+ +++|+++|+++|++||+|.+|. |+-..|.. ...++ ..|+++ +-|.|.|-- -
T Consensus 223 iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG~pi 299 (457)
T PRK05639 223 VAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-GIGRTGKWFASEWFEVKPDLII--FGKGVASGMGL 299 (457)
T ss_pred eEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcCchHHHHHhcCCCCCEEE--echhhcCCCcc
Confidence 455666542 2233222 7899999999999999999997 54222321 11122 279888 579986422 2
Q ss_pred EEEEEeCC
Q 015609 372 GIIFFRRG 379 (403)
Q Consensus 372 G~I~~~~~ 379 (403)
|+++++++
T Consensus 300 ~av~~~~~ 307 (457)
T PRK05639 300 SGVIGRKE 307 (457)
T ss_pred eeEEehHH
Confidence 66666654
No 366
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.55 E-value=0.0016 Score=68.67 Aligned_cols=86 Identities=19% Similarity=0.166 Sum_probs=51.7
Q ss_pred HHHHHHHhccC--CCcEEEEeCC---CCCccc-c---HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEE
Q 015609 290 YEKLEEKAMDY--RPKILICGGS---SYPREW-D---YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIV 358 (403)
Q Consensus 290 ~d~Le~~i~~~--~pklViv~~s---~~g~~~-D---i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDiv 358 (403)
++.+++++... +...||+++. +.|... | +++++++|+++|++||+|..|. +|-........-++ ..|++
T Consensus 223 ~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv 302 (472)
T PRK08742 223 ADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLL 302 (472)
T ss_pred HHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEE
Confidence 56777777532 3445666651 234322 2 7899999999999999999976 44332111111111 27999
Q ss_pred EEcCcCCCc-C--CceEEEEEeC
Q 015609 359 TSTTHKSLR-G--PRGGIIFFRR 378 (403)
Q Consensus 359 t~StHKtL~-G--P~GG~I~~~~ 378 (403)
++ -|.|. | |-++++ +++
T Consensus 303 ~~--gKgl~gG~~Plaav~-~~~ 322 (472)
T PRK08742 303 CL--SKGLTGGFLPLSAVL-ATQ 322 (472)
T ss_pred EE--cccccCCCCCcceee-ccH
Confidence 86 58885 3 444444 444
No 367
>PRK06148 hypothetical protein; Provisional
Probab=97.51 E-value=0.004 Score=71.51 Aligned_cols=198 Identities=17% Similarity=0.105 Sum_probs=99.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc--cCC
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL--LPG 241 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all--~pG 241 (403)
+|+|.+|+...+... +...++. ++.. .+ ..+++++++..... ...+.+||++||.++++... ...
T Consensus 640 hp~v~~Ai~~q~~~l----~~~~~~~--~~~~---~~-lAe~L~~~~p~~~~---~v~f~nSGsEA~e~AlklAr~~tGr 706 (1013)
T PRK06148 640 HPRVVAAAARQAARL----NTNTRYL--HDAI---VA-YAERLTATLPDGLT---VAFFVNSGSEANSLALRLARAHTGQ 706 (1013)
T ss_pred CHHHHHHHHHHHhhc----CCcCCcC--CHHH---HH-HHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHhcCC
Confidence 789999988776532 1111221 2222 12 23456676653222 23455789999999987552 234
Q ss_pred CeEEecCCCCCccccccccCCccchhhh---cc--cceEEee----eecCCCCCCCC-------HHHHHHHhcc-----C
Q 015609 242 DRIMGLDSPSGGHLSHGYHTPGGKKVSA---AS--IFFESFP----YKVNPQTGYID-------YEKLEEKAMD-----Y 300 (403)
Q Consensus 242 D~VL~~~~ehgghlsh~~~~~~~~~v~~---~g--~~~~vv~----~~vd~~~g~ID-------~d~Le~~i~~-----~ 300 (403)
.+||+....|.|... +.+.-.+..... .+ ..+..++ |.+.. ...| .+.++++++. .
T Consensus 707 ~~ii~~~~~YHG~t~-~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~l~~~i~~~~~~~~ 783 (1013)
T PRK06148 707 RDAIVLDHAYHGTTT-ELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPE--RWPDAEHGRRFAESVAEQIAAMAAKGR 783 (1013)
T ss_pred CeEEEEcCCccCCCc-chhhcCchhhcccCCCCCCCCceEcCCCCccccCC--CCChhhhHHHHHHHHHHHHHhhhccCC
Confidence 568887766544421 110000000000 00 0011111 10000 0011 1345555531 2
Q ss_pred CCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccc-cCCCC-cccEEEEcCcCCCcC-Cc
Q 015609 301 RPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKEL-ASPFD-YCDIVTSTTHKSLRG-PR 370 (403)
Q Consensus 301 ~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~-~~p~~-~aDivt~StHKtL~G-P~ 370 (403)
++..||+++- +.|.+.+ +++++++|+++|+++|+|.+|. +|-.+.+.. ..-++ ..|++++ -|.|+| -+
T Consensus 784 ~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~--gK~lggG~P 861 (1013)
T PRK06148 784 GPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTM--GKPIGNGHP 861 (1013)
T ss_pred ceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeee--cccccCCcc
Confidence 3455666632 3344443 8999999999999999999984 554332111 01111 2788776 698854 22
Q ss_pred eEEEEEeCC
Q 015609 371 GGIIFFRRG 379 (403)
Q Consensus 371 GG~I~~~~~ 379 (403)
-|+++++++
T Consensus 862 lgav~~~~e 870 (1013)
T PRK06148 862 MGAVVTTRE 870 (1013)
T ss_pred eEEEEEcHH
Confidence 355555544
No 368
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.49 E-value=0.0023 Score=67.32 Aligned_cols=60 Identities=15% Similarity=0.176 Sum_probs=37.7
Q ss_pred HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEEEcCcCCCcC-CceEEEEEeCC
Q 015609 318 YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVTSTTHKSLRG-PRGGIIFFRRG 379 (403)
Q Consensus 318 i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt~StHKtL~G-P~GG~I~~~~~ 379 (403)
+++++++|+++|++||+|..|. +|-.........++ ..|++++ -|.|.| -+-|+++.++.
T Consensus 248 l~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~--gK~l~gG~Pi~av~~~~~ 310 (459)
T PRK06931 248 LQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVM--SKAVGGGLPLAVLGIKKE 310 (459)
T ss_pred HHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEe--cccccCCcceeeeeeHHH
Confidence 8899999999999999999976 44322111111112 2788886 588854 12245555543
No 369
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.48 E-value=0.00065 Score=68.58 Aligned_cols=200 Identities=12% Similarity=0.048 Sum_probs=109.3
Q ss_pred ccceeccCccCcHHHHHHHHHHhhhcCCCCCC-CCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHH
Q 015609 153 GIELIASENFVCRAVMEALGSHLTNKYSEGYP-GARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANF 231 (403)
Q Consensus 153 ~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~p-gsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~ 231 (403)
..++-+++..++++|++.....+.+-.+.|.. ..+.+.+-+....+++ |++.+++||+.+.. |-+.+...++|.+..
T Consensus 6 ~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~-a~~~lreLl~iPd~-Y~VlflqGGat~qf~ 83 (365)
T COG1932 6 VYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEE-AEKDLRELLNIPDD-YKVLFLQGGATGQFA 83 (365)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHH-HHHHHHHHhCCCCC-ceEEEEcCccHHHHH
Confidence 45678889999999999988777654433321 1244455555555654 78899999999874 333333456788888
Q ss_pred HHHhhhccCCCe--EEecCCCCCccccccccCCccchhhhcccceEE---eeeecCCCCCCCCHHHHHHHhccCCCcEEE
Q 015609 232 AVYTGLLLPGDR--IMGLDSPSGGHLSHGYHTPGGKKVSAASIFFES---FPYKVNPQTGYIDYEKLEEKAMDYRPKILI 306 (403)
Q Consensus 232 aal~all~pGD~--VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~v---v~~~vd~~~g~ID~d~Le~~i~~~~pklVi 306 (403)
++.++|+..+.. |.+...+. ++- +.+...+....+ ....-+ -+...|++... +.. +...|.
T Consensus 84 ~~p~nLl~~~~~~yv~~g~Ws~---~a~-------~eA~~~~~~~~~~~~~~~~~~-~~~iP~~~~~~--~~~-~~ayv~ 149 (365)
T COG1932 84 MAPMNLLGKRGTDYVDTGAWSE---FAI-------KEAKKVGKQPKLIDARIEEAG-YGSIPDLSKWD--FSD-NDAYVH 149 (365)
T ss_pred HHHHhhhcccCceeEeeeehhH---hHH-------HHHHHhcccccccccceeccC-ccCCCChhhcc--cCC-CccEEE
Confidence 999999865543 44332111 100 001111110001 111111 11233444332 211 123343
Q ss_pred EeC--CCCCcccc-HHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCCCcCCce-EEEEEeCC
Q 015609 307 CGG--SSYPREWD-YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGPRG-GIIFFRRG 379 (403)
Q Consensus 307 v~~--s~~g~~~D-i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKtL~GP~G-G~I~~~~~ 379 (403)
... +..|..++ ...+ .. +.++++|++-.+... +.++...|+++++.+|.| ||.| ++++.++.
T Consensus 150 ~~~NeTi~Gv~v~~~p~~---~~--~~~~v~D~SS~ilsr-----~iDvsk~dviyagaQKnl-GpaGltvvIvr~~ 215 (365)
T COG1932 150 FCWNETISGVEVPELPDI---GS--DGLLVADASSAILSR-----PIDVSKYDVIYAGAQKNL-GPAGLTVVIVRPD 215 (365)
T ss_pred EecCCcccceEccCCCCC---CC--CceEEEecccHHhcC-----CCChhHcceEEEehhhcc-CccceEEEEEcHH
Confidence 332 33454332 2222 11 289999998555421 223334899999999997 7888 77776663
No 370
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.48 E-value=0.0028 Score=66.78 Aligned_cols=76 Identities=18% Similarity=0.263 Sum_probs=48.5
Q ss_pred CHHHHHHHhccC--CCcEEEEeCC--CCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccc--cC--CCC-cc
Q 015609 289 DYEKLEEKAMDY--RPKILICGGS--SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKEL--AS--PFD-YC 355 (403)
Q Consensus 289 D~d~Le~~i~~~--~pklViv~~s--~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~--~~--p~~-~a 355 (403)
+++.+++++.++ +...||+++- +.|...+ +++|+++|+++|++||+|.+| .|+-..|.. .. .+. ..
T Consensus 237 ~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~-tGfGrtG~~fa~e~~gv~~~P 315 (464)
T TIGR00699 237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQ-TGVGATGKFWAHEHWNLDDPP 315 (464)
T ss_pred HHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeee-eCCCCCcchhHHHhcCCCCCC
Confidence 456778888643 2345666642 3345555 899999999999999999998 444222221 11 121 27
Q ss_pred cEEEEcCcCCCc
Q 015609 356 DIVTSTTHKSLR 367 (403)
Q Consensus 356 Divt~StHKtL~ 367 (403)
|++++ -|.|.
T Consensus 316 Di~t~--gK~lg 325 (464)
T TIGR00699 316 DMVTF--SKKFQ 325 (464)
T ss_pred CEEEe--hhhhc
Confidence 88665 69873
No 371
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=97.45 E-value=0.0045 Score=64.71 Aligned_cols=59 Identities=24% Similarity=0.325 Sum_probs=37.8
Q ss_pred HHHHHHHHHHcCCEEEEecccccccccccccc--CCCC-cccEEEEcCcCCCc-CCceEEEEEeCC
Q 015609 318 YGRFRQIADKCGAVLMCDMAHISGLIAAKELA--SPFD-YCDIVTSTTHKSLR-GPRGGIIFFRRG 379 (403)
Q Consensus 318 i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~--~p~~-~aDivt~StHKtL~-GP~GG~I~~~~~ 379 (403)
+++|+++|+++|+++|+|..+. |+...+... ..++ ..|++ ++.|.|. |-+-|+++++++
T Consensus 242 l~~l~~l~~~~gillI~DEV~t-g~gr~g~~~a~~~~~v~pDi~--t~sK~l~~G~pig~v~~~~~ 304 (451)
T PRK06918 242 VQEVRNICSEHGILFVADEIQT-GFARTGKYFAIEHFDVVPDLI--TVSKSLGAGVPISGVIGRKE 304 (451)
T ss_pred HHHHHHHHHHcCCEEEEecccc-CcCccCceehhHhcCCCCCEE--eeehhhcCCCccEEEEEcHH
Confidence 8899999999999999999965 332222111 1111 26755 5689885 223377777654
No 372
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.38 E-value=0.00058 Score=68.90 Aligned_cols=192 Identities=18% Similarity=0.189 Sum_probs=112.7
Q ss_pred ccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-ChHHHHHHHHhh
Q 015609 158 ASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPY-SCTSANFAVYTG 236 (403)
Q Consensus 158 aSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~-SGT~An~aal~a 236 (403)
.+++.++..-..+|.. -.|.|.|+|.| -.|. +.+++.||.++ ++|+ -|-.|-+..+..
T Consensus 55 SGTgams~~qwaamm~-----GDEAYagsrs~------~~L~----~avkdifGfq~------~iPthQGRgAE~Il~~i 113 (471)
T COG3033 55 SGTGAMTDKQWAAMMR-----GDEAYAGSRSY------YALA----DAVKDIFGFQY------TIPTHQGRGAENILIPI 113 (471)
T ss_pred CCcccccHHHHHHHhc-----cchhhcccccH------HHHH----HHHHHhcCcee------eeeccCCccHHHHHHHH
Confidence 3466677777666642 23455565543 2233 34778999875 4454 577777777777
Q ss_pred hccCCCeEEecCC--CCCccccccccCCccch-hhhcccceEE----------eeeecCCCCCCCCHHHHHHHhccCCCc
Q 015609 237 LLLPGDRIMGLDS--PSGGHLSHGYHTPGGKK-VSAASIFFES----------FPYKVNPQTGYIDYEKLEEKAMDYRPK 303 (403)
Q Consensus 237 ll~pGD~VL~~~~--ehgghlsh~~~~~~~~~-v~~~g~~~~v----------v~~~vd~~~g~ID~d~Le~~i~~~~pk 303 (403)
++++|+.+..... ..+.|+... +. +...|..+.- +.+++ .|.+|+++|+++|++..+.
T Consensus 114 ~ik~~~~~pg~~~~~~sN~~FdTT------r~h~~~ng~~~~n~~~~ea~d~~~~~pF---KGd~D~~kLe~lidevG~~ 184 (471)
T COG3033 114 LIKKGEQEPGSKMVAFSNYHFDTT------RGHIQINGATPRNVYVDEAFDTEVKYPF---KGNFDLEKLERLIDEVGAD 184 (471)
T ss_pred HhhhccccCCccccccccceecch------hHHHHhcCCccccccccccccccccCCC---CCccCHHHHHHHHHHhCcc
Confidence 7777766544111 123444321 00 0111111100 11121 4789999999999875442
Q ss_pred ---EEEEe---CCCCCc---cccHHHHHHHHHHcCCEEEEeccccccccc-c-----ccccCC--------CCcccEEEE
Q 015609 304 ---ILICG---GSSYPR---EWDYGRFRQIADKCGAVLMCDMAHISGLIA-A-----KELASP--------FDYCDIVTS 360 (403)
Q Consensus 304 ---lViv~---~s~~g~---~~Di~~I~~Iake~Ga~LivDaAh~~Glia-~-----g~~~~p--------~~~aDivt~ 360 (403)
.|++. .+..|. .-+++++++||++|+++++.|++..+--.. . +..... +.|||-++.
T Consensus 185 nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~m 264 (471)
T COG3033 185 NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTM 264 (471)
T ss_pred cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhhee
Confidence 33332 222343 346788899999999999999986542111 0 000001 126999999
Q ss_pred cCcCCCcCCceEEEEEeCC
Q 015609 361 TTHKSLRGPRGGIIFFRRG 379 (403)
Q Consensus 361 StHKtL~GP~GG~I~~~~~ 379 (403)
|.-|=-..+.||++..+++
T Consensus 265 S~KKD~lvnmGGfl~~~D~ 283 (471)
T COG3033 265 SAKKDGLVNMGGFLCFKDD 283 (471)
T ss_pred eccccceeccccEEEecCc
Confidence 9999766688999999886
No 373
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.34 E-value=0.0026 Score=65.16 Aligned_cols=153 Identities=21% Similarity=0.137 Sum_probs=79.5
Q ss_pred eEEe-CChHHHHHHHHhhhcc------CCC--eEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCH
Q 015609 220 NVQP-YSCTSANFAVYTGLLL------PGD--RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDY 290 (403)
Q Consensus 220 ~V~~-~SGT~An~aal~all~------pGD--~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~ 290 (403)
.|+| .|||+||.+++....+ +-+ +||.....+.|+. -+++... ..+..+..+...--++- .-..-|.
T Consensus 118 rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~t-lgals~~--~~s~y~~~~~p~~p~v~-~~~ynd~ 193 (433)
T KOG1401|consen 118 RVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRT-LGALSVT--GNSKYGLPFDPIAPDVV-TAEYNDS 193 (433)
T ss_pred EEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcc-hhHHHhh--cccccCCCCCCCCCcee-ecccCCH
Confidence 3554 5899999999865432 222 3888877765542 1211000 00001111111000000 0124689
Q ss_pred HHHHHHhccCCC--cEEEEeCCC-CCcc--cc---HHHHHHHHHHcCCEEEEeccccc-cccccccccCCCC-cccEEEE
Q 015609 291 EKLEEKAMDYRP--KILICGGSS-YPRE--WD---YGRFRQIADKCGAVLMCDMAHIS-GLIAAKELASPFD-YCDIVTS 360 (403)
Q Consensus 291 d~Le~~i~~~~p--klViv~~s~-~g~~--~D---i~~I~~Iake~Ga~LivDaAh~~-Glia~g~~~~p~~-~aDivt~ 360 (403)
.+++++++.++- ..||+++.. -|.. .| +..++++|+++|++||.|..|.- |-.+.+....-+. .-|+.|
T Consensus 194 t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t- 272 (433)
T KOG1401|consen 194 TALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITT- 272 (433)
T ss_pred HHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCccee-
Confidence 999999988763 446666432 2222 22 55778999999999999998762 3222111111111 147765
Q ss_pred cCcCCCcC-CceEEEEEeC
Q 015609 361 TTHKSLRG-PRGGIIFFRR 378 (403)
Q Consensus 361 StHKtL~G-P~GG~I~~~~ 378 (403)
.-|.|.| -+-|+.+.++
T Consensus 273 -~aK~L~gGlPigA~~v~~ 290 (433)
T KOG1401|consen 273 -VAKPLGGGLPIGATGVRD 290 (433)
T ss_pred -ehhhccCCceeEEEeehH
Confidence 4588754 2224444444
No 374
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.34 E-value=0.0033 Score=62.94 Aligned_cols=201 Identities=20% Similarity=0.198 Sum_probs=101.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChHHHHHHHHhhhc-----
Q 015609 164 CRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLL----- 238 (403)
Q Consensus 164 ~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT~An~aal~all----- 238 (403)
+|.+++++......-+ ..+|.+. +....+++ +.+.++||.+. .+-..+|.+|+..++...-
T Consensus 77 hpki~~aLqeq~~kLt----lssrafY-nd~~~~f~----~~vt~lf~~~k-----vlpmnTGaEa~Eta~KLaR~wgy~ 142 (427)
T KOG1402|consen 77 HPKIIKALQEQADKLT----LSSRAFY-NDVLGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETACKLARKWGYR 142 (427)
T ss_pred CHHHHHHHHHHHhHhh----hhhHHHh-hhhHHHHH----HHHHHhcCcce-----eeecccchhHHHHHHHHHHHHHHh
Confidence 6677777666554322 1112111 12223344 35889999886 2335579999998876441
Q ss_pred -c--CCCe--EEecCCCCCccccccccCCccchhhhccc-----ce-EEeeeecCCCCCCCCHHHHHHHhccCCCcEEEE
Q 015609 239 -L--PGDR--IMGLDSPSGGHLSHGYHTPGGKKVSAASI-----FF-ESFPYKVNPQTGYIDYEKLEEKAMDYRPKILIC 307 (403)
Q Consensus 239 -~--pGD~--VL~~~~ehgghlsh~~~~~~~~~v~~~g~-----~~-~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv 307 (403)
+ |.|+ |+.......|.. .+ .+++... .| -.+|..++ .-..-|.++|+..++..+...+++
T Consensus 143 ~K~ip~nka~il~~~~nFhGrT-~~-------ais~s~d~ds~~~fgp~~P~~~~-~v~Y~d~eale~~l~~~~vaaFiv 213 (427)
T KOG1402|consen 143 KKNIPKNKAKILSAENNFHGRT-LG-------AISLSTDPDSWDGFGPFLPGVVD-KVPYGDAEALEVALKSPNVAAFIV 213 (427)
T ss_pred hccCCccceeEEEecccccCce-ee-------eEEecCCcchhhccCCCCCCcce-eeccCCHHHHHHHhcCCCeeEEEe
Confidence 2 4343 333332221211 00 1111110 01 01111111 112457888888888644455566
Q ss_pred eCC--CCCccc----cHHHHHHHHHHcCCEEEEeccccccccccccc-cCCCC--cccEEEEcCcCCCcCCc--eEEEEE
Q 015609 308 GGS--SYPREW----DYGRFRQIADKCGAVLMCDMAHISGLIAAKEL-ASPFD--YCDIVTSTTHKSLRGPR--GGIIFF 376 (403)
Q Consensus 308 ~~s--~~g~~~----Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~-~~p~~--~aDivt~StHKtL~GP~--GG~I~~ 376 (403)
++- .-|.+. =+++.+++|++|++++|+|..|. |+.-.|.+ .-..+ .-|++.. -|.|.|-- -..+++
T Consensus 214 EPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQT-Gl~RTGk~la~d~env~PDivil--gKalSGG~~Pvsavl~ 290 (427)
T KOG1402|consen 214 EPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQT-GLARTGKLLACDYENVRPDIVIL--GKALSGGVYPVSAVLA 290 (427)
T ss_pred eccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhh-cccccCcEEEeehhhcCCCeEEE--eccccCCeeeeEEEEe
Confidence 532 233322 28999999999999999999986 33222321 11111 1588874 48776521 134444
Q ss_pred eCCCCCcccCCCcccC
Q 015609 377 RRGKKPRKQGIPLNHG 392 (403)
Q Consensus 377 ~~~~~~~~~~~p~~qG 392 (403)
.++.-+ .+.|+.+|
T Consensus 291 ~~~im~--~~~pgeHg 304 (427)
T KOG1402|consen 291 DDDIML--NIKPGEHG 304 (427)
T ss_pred cHHHHh--ccCCCccc
Confidence 444211 24555554
No 375
>PRK08297 L-lysine aminotransferase; Provisional
Probab=97.28 E-value=0.0056 Score=64.03 Aligned_cols=85 Identities=19% Similarity=0.125 Sum_probs=52.4
Q ss_pred HHHHHHHhccC--CCcEEEEeCC--CCCc----cccHHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-cccEEE
Q 015609 290 YEKLEEKAMDY--RPKILICGGS--SYPR----EWDYGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-YCDIVT 359 (403)
Q Consensus 290 ~d~Le~~i~~~--~pklViv~~s--~~g~----~~Di~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~aDivt 359 (403)
++++++++.++ ++..||+++- +.|. .--+++|+++|+++|++||+|.+|. +|.........-++ ..|+++
T Consensus 212 ~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~ 291 (443)
T PRK08297 212 LAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVA 291 (443)
T ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEE
Confidence 45666777542 3456677632 2232 2358999999999999999999985 44432111111112 278887
Q ss_pred EcCcCCCcCCceEEEEEeC
Q 015609 360 STTHKSLRGPRGGIIFFRR 378 (403)
Q Consensus 360 ~StHKtL~GP~GG~I~~~~ 378 (403)
+ -|.+ |.||++..++
T Consensus 292 ~--gK~l--~~~a~l~~~~ 306 (443)
T PRK08297 292 F--GKKT--QVCGIMAGRR 306 (443)
T ss_pred e--cccc--cccceecchH
Confidence 4 7887 4567776543
No 376
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.14 E-value=0.0081 Score=67.90 Aligned_cols=147 Identities=16% Similarity=0.078 Sum_probs=86.0
Q ss_pred HHHHHHHcCCCCCCCcceEEe-CChHHHHHHHHhhh-cc--CCCeEEecCCCCCccccccccCCccchhh--hcccceEE
Q 015609 203 FERALKAFDLDSDNWGVNVQP-YSCTSANFAVYTGL-LL--PGDRIMGLDSPSGGHLSHGYHTPGGKKVS--AASIFFES 276 (403)
Q Consensus 203 rerla~lfg~~~~~~~v~V~~-~SGT~An~aal~al-l~--pGD~VL~~~~ehgghlsh~~~~~~~~~v~--~~g~~~~v 276 (403)
+..+++|.|.+-+ |-.. -.+|.+-.+++++. .. +..+|++....|...+. .+. ..+.++++
T Consensus 130 Qtmi~~LtGm~va----NASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~---------v~~t~~~~~g~~i 196 (954)
T PRK12566 130 QQMTIDLTGLDLA----NASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLS---------VLRTRAEGFGFEL 196 (954)
T ss_pred HHHHHHHhCchhh----hhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHH---------HHHHhhhcCCcEE
Confidence 5679999999853 2111 24555555555444 12 24578887765432211 011 11222333
Q ss_pred eeeecCCCCCCCCHHHHHHHhccCCCcEEEEeC-CCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-c
Q 015609 277 FPYKVNPQTGYIDYEKLEEKAMDYRPKILICGG-SSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-Y 354 (403)
Q Consensus 277 v~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~-s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~ 354 (403)
+. +++++++.+ +...|++.. +.+|.+.|+++|.+++|+.|++++ .++--+ +.+.+..|-+ +
T Consensus 197 ~~------------~~~~~~~~~-~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~-~~~d~l---aL~ll~~Pge~G 259 (954)
T PRK12566 197 VV------------DAVDNLAAH-AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALAC-VAADLL---SLLVLTPPGELG 259 (954)
T ss_pred EE------------cchhhcCCC-CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEE-EEeCHH---HHhCCCChhhcC
Confidence 31 334444432 344455544 457888899999999999999865 444333 2234445555 4
Q ss_pred ccEEEEcCc-----CCCcCCceEEEEEeCC
Q 015609 355 CDIVTSTTH-----KSLRGPRGGIIFFRRG 379 (403)
Q Consensus 355 aDivt~StH-----KtL~GP~GG~I~~~~~ 379 (403)
+||++++++ =.++||..|++.+++.
T Consensus 260 ADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~ 289 (954)
T PRK12566 260 ADVVLGSTQRFGVPMGYGGPHAAYFACRDD 289 (954)
T ss_pred CcEEeeCCCcCCCCCCCCCCCeeeeeehHH
Confidence 999988766 3467888899999875
No 377
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=96.94 E-value=0.031 Score=62.88 Aligned_cols=85 Identities=14% Similarity=0.044 Sum_probs=49.1
Q ss_pred HHHHHHhcc-------CCCcEEEEeCC---CCCccc-c---HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-c
Q 015609 291 EKLEEKAMD-------YRPKILICGGS---SYPREW-D---YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD-Y 354 (403)
Q Consensus 291 d~Le~~i~~-------~~pklViv~~s---~~g~~~-D---i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~-~ 354 (403)
+.+++.+.+ .+...||+++. ..|++. | +++++++|+++|++||+|..+. +|-........-++ .
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~ 646 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCK 646 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCC
Confidence 556766642 12345666652 234433 2 7899999999999999999865 33222111011112 2
Q ss_pred ccEEEEcCcCCCcC---CceEEEEEeC
Q 015609 355 CDIVTSTTHKSLRG---PRGGIIFFRR 378 (403)
Q Consensus 355 aDivt~StHKtL~G---P~GG~I~~~~ 378 (403)
.|+++++ |.|.| |-|+ +++++
T Consensus 647 PDIi~~g--KgLtgG~~Plaa-~l~~~ 670 (817)
T PLN02974 647 PDIACYA--KLLTGGLVPLAA-TLATE 670 (817)
T ss_pred CCEEeec--ccccCCCCccEE-EEEcH
Confidence 6888855 88754 4444 44444
No 378
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=96.92 E-value=0.0051 Score=63.47 Aligned_cols=112 Identities=21% Similarity=0.288 Sum_probs=77.2
Q ss_pred CCCCcceEEeCChHHHHHHHHhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHH
Q 015609 214 SDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKL 293 (403)
Q Consensus 214 ~~~~~v~V~~~SGT~An~aal~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~L 293 (403)
...|.+ ++.++.|.++..+++.++++||.|++-...+.+-+. .++..| +.+++++.|. ..+++|.|
T Consensus 122 ~~~wdi-iit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~---------s~~a~g--v~~ipv~md~--~Gi~pE~l 187 (472)
T KOG0634|consen 122 YKNWDI-IITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ---------SMEALG--VKIIPVKMDQ--DGIDPESL 187 (472)
T ss_pred CCCceE-EEecCCchHHHHHHHHhhcCCCceEEecccchHHHH---------hccccC--ceEEeccccC--CCCCHHHH
Confidence 455753 344456889999999999999999998765433221 122233 5677777763 46999999
Q ss_pred HHHhccC--------CCcEEEEeCC---CCCcccc---HHHHHHHHHHcCCEEEEecccc
Q 015609 294 EEKAMDY--------RPKILICGGS---SYPREWD---YGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 294 e~~i~~~--------~pklViv~~s---~~g~~~D---i~~I~~Iake~Ga~LivDaAh~ 339 (403)
++.+..- +|+++++-++ -+|.... =++|.+||++|+.++++|.--.
T Consensus 188 ~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy 247 (472)
T KOG0634|consen 188 EEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYY 247 (472)
T ss_pred HHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccc
Confidence 9988642 3667765322 2444333 3689999999999999998644
No 379
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=96.92 E-value=0.0083 Score=62.74 Aligned_cols=83 Identities=25% Similarity=0.335 Sum_probs=52.1
Q ss_pred HHHHHHHhccCCCc---EEEEeCC---CCCcccc----HHHHHHHHHHcCCEEEEeccccccccccccccCCCC------
Q 015609 290 YEKLEEKAMDYRPK---ILICGGS---SYPREWD----YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD------ 353 (403)
Q Consensus 290 ~d~Le~~i~~~~pk---lViv~~s---~~g~~~D----i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~------ 353 (403)
.++||+++.++.|. .+|+++- ..|+..+ ++++++||++||++||+|.. +.|.--.| ..|.
T Consensus 200 a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV-~tGFGRTG---~~FA~e~~gi 275 (449)
T COG0161 200 ADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV-ATGFGRTG---KMFACEHAGI 275 (449)
T ss_pred HHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc-eeCCCcCc---hhhhhhhcCC
Confidence 67888888876653 3454432 2343332 89999999999999999997 44432222 1221
Q ss_pred cccEEEEcCcCCCcC---CceEEEEEeC
Q 015609 354 YCDIVTSTTHKSLRG---PRGGIIFFRR 378 (403)
Q Consensus 354 ~aDivt~StHKtL~G---P~GG~I~~~~ 378 (403)
.-|+++. -|.|.| |-|++++.++
T Consensus 276 ~PDi~~~--aKGLT~GY~Pl~a~l~~~~ 301 (449)
T COG0161 276 VPDILCL--AKGLTGGYLPLSAVLTSDR 301 (449)
T ss_pred CCCeeee--cccccccchhhHhHhhhHH
Confidence 1588874 487754 5556665543
No 380
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=96.34 E-value=0.1 Score=52.09 Aligned_cols=89 Identities=19% Similarity=0.178 Sum_probs=58.7
Q ss_pred CCCCHHHHHHHhccCCCcEEEEeCCCC--C---ccccHHHHHHHHHHcCCEEEEecccccccccccccc---CCCC-ccc
Q 015609 286 GYIDYEKLEEKAMDYRPKILICGGSSY--P---REWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELA---SPFD-YCD 356 (403)
Q Consensus 286 g~ID~d~Le~~i~~~~pklViv~~s~~--g---~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~---~p~~-~aD 356 (403)
.++|+++|+-. ..+.+|++.-+.+ | +.-.+.+|.++|+++|++|++|.|-+...- +... .|+- .--
T Consensus 167 Y~vDF~~l~i~---e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP--~iifsd~~~~w~~Ni 241 (417)
T COG3977 167 YHVDFEHLHIG---ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFP--GIIFSDATPLWNENI 241 (417)
T ss_pred eccCHHHcccc---cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCC--ceecccccccCCCCE
Confidence 45888887532 2467787764433 3 344688899999999999999998655321 1111 1111 123
Q ss_pred EEEEcCcCC-CcCCceEEEEEeCC
Q 015609 357 IVTSTTHKS-LRGPRGGIIFFRRG 379 (403)
Q Consensus 357 ivt~StHKt-L~GP~GG~I~~~~~ 379 (403)
+.++|..|. |+|-|.|+++.+..
T Consensus 242 ilC~SLSK~GLPG~R~GIiIane~ 265 (417)
T COG3977 242 ILCMSLSKLGLPGSRCGIIIANEK 265 (417)
T ss_pred EEEeehhhcCCCCcceeEEEccHH
Confidence 678899995 56667799998764
No 381
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=96.24 E-value=0.098 Score=53.52 Aligned_cols=211 Identities=20% Similarity=0.232 Sum_probs=120.4
Q ss_pred HHHHHHHHHHh-hhcccceecc-------CccCcHHHHHHHHHHhhhcCCCCCCCCccc---cchH-HHHHHHHHHHHHH
Q 015609 139 IFDIMEKEKQR-QFKGIELIAS-------ENFVCRAVMEALGSHLTNKYSEGYPGARYY---TGNQ-YIDQIENLCFERA 206 (403)
Q Consensus 139 i~~li~~e~~r-q~~~l~LiaS-------en~~~p~V~eA~~s~l~~~y~eG~pgsr~~---~G~~-~~~~lE~~arerl 206 (403)
|..|.+.-+.. ..++++|--+ ..++-++|.+|....+.... ...| .|.+ +.+++ .
T Consensus 13 IlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~------~k~Yl~i~G~~~f~~~~-------~ 79 (396)
T COG1448 13 ILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEK------TKNYLPIEGLPEFLEAV-------Q 79 (396)
T ss_pred hhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcccc------ccccCCcCCcHHHHHHH-------H
Confidence 55555444332 2356777544 45557788888665443321 1222 2332 22222 3
Q ss_pred HHHcCCCC-----CCCcceEEeCChHHHHHHHHhhh--ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeee
Q 015609 207 LKAFDLDS-----DNWGVNVQPYSCTSANFAVYTGL--LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPY 279 (403)
Q Consensus 207 a~lfg~~~-----~~~~v~V~~~SGT~An~aal~al--l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~ 279 (403)
+-+||.++ ..+ +.+|..+||.|+..+..-+ ..|..+|-+++...+-|.. -....| +++..|
T Consensus 80 ~llFG~d~~~l~~~Rv-~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~---------If~~aG--l~v~~Y 147 (396)
T COG1448 80 KLLFGADSPALAEDRV-ATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA---------IFEAAG--LEVETY 147 (396)
T ss_pred HHhcCCCcHHHHhhhH-hheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH---------HHHhcC--Cceeee
Confidence 34788552 122 3578889999988775444 4566678888877665531 112234 444433
Q ss_pred e-cCCCCCCCCHHHHHHHhccCCC-cEEEEeC-CC--CCc---cccHHHHHHHHHHcCCEEEEeccccccccccccccCC
Q 015609 280 K-VNPQTGYIDYEKLEEKAMDYRP-KILICGG-SS--YPR---EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASP 351 (403)
Q Consensus 280 ~-vd~~~g~ID~d~Le~~i~~~~p-klViv~~-s~--~g~---~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p 351 (403)
+ .|.++..+|++.+-+.+++... .+|+++. .. +|. ...|.+|.++.++.|.+-++|.| .-|.-. |.....
T Consensus 148 ~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~A-YQGF~~-GleeDa 225 (396)
T COG1448 148 PYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIA-YQGFAD-GLEEDA 225 (396)
T ss_pred eccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehh-hhhhcc-chHHHH
Confidence 3 3445677999998888876433 4555442 23 343 34588999999999999999998 444321 211110
Q ss_pred --C----C-cc-cEEEEcCcCCC--cCCc-eEEEEE
Q 015609 352 --F----D-YC-DIVTSTTHKSL--RGPR-GGIIFF 376 (403)
Q Consensus 352 --~----~-~a-Divt~StHKtL--~GP~-GG~I~~ 376 (403)
+ . .. =+|+.|+.|.| +|-| |++.+.
T Consensus 226 ~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vv 261 (396)
T COG1448 226 YALRLFAEVGPELLVASSFSKNFGLYGERVGALSVV 261 (396)
T ss_pred HHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEE
Confidence 0 0 11 37788999986 5666 444444
No 382
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=94.94 E-value=0.47 Score=48.90 Aligned_cols=108 Identities=15% Similarity=0.134 Sum_probs=70.1
Q ss_pred eEEeCCh-HHHHHHHHhhhc-cCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCC-CCCCHHHHHHH
Q 015609 220 NVQPYSC-TSANFAVYTGLL-LPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQT-GYIDYEKLEEK 296 (403)
Q Consensus 220 ~V~~~SG-T~An~aal~all-~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~-g~ID~d~Le~~ 296 (403)
+|+.|+| +.|+..++..++ .+.+-||++-..|. .+. ..++..| ...++|-+|+++ +.+|.++|++.
T Consensus 138 dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYP------LYs---Ati~l~~--~~~v~YyLdEe~~W~ld~~el~~~ 206 (475)
T KOG0258|consen 138 DIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYP------LYS---ATISLLG--GTQVPYYLDEESNWSLDVAELERS 206 (475)
T ss_pred HeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCc------hhH---HHHHHhC--CcccceeeccccCCCCCHHHHHHH
Confidence 5666654 668888777665 46777888765531 111 1233333 234566566554 46999999987
Q ss_pred hcc----CCCcEE-EEeCCC-CCc---cccHHHHHHHHHHcCCEEEEeccc
Q 015609 297 AMD----YRPKIL-ICGGSS-YPR---EWDYGRFRQIADKCGAVLMCDMAH 338 (403)
Q Consensus 297 i~~----~~pklV-iv~~s~-~g~---~~Di~~I~~Iake~Ga~LivDaAh 338 (403)
+.+ .+|+++ |+++.| +|. .-.+++|..+|.+.|+.|+.|...
T Consensus 207 ~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVY 257 (475)
T KOG0258|consen 207 VDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVY 257 (475)
T ss_pred HHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHH
Confidence 754 356654 444322 443 347999999999999999999864
No 383
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=94.91 E-value=0.06 Score=53.79 Aligned_cols=165 Identities=15% Similarity=0.149 Sum_probs=95.8
Q ss_pred HHHHHHHHcCCCCCCCcceEEe-CChHHHHHHHHhhhccCCC---eEEecCCCCCccccccccCCccchhhhcccceE--
Q 015609 202 CFERALKAFDLDSDNWGVNVQP-YSCTSANFAVYTGLLLPGD---RIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFE-- 275 (403)
Q Consensus 202 arerla~lfg~~~~~~~v~V~~-~SGT~An~aal~all~pGD---~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~-- 275 (403)
+-..++.+.|+...+ |.. +|=|.-++..+.++.+|-. +|+. +.++..|..|... ..+.+.|+..+
T Consensus 116 il~l~~~iVGA~e~E----vavmNsLTvNlh~Ll~sFyKPTekR~KILl---E~kaFPSDhYAie--sQ~~lhG~~~e~s 186 (465)
T KOG3846|consen 116 ILPLLAPIVGAQENE----VAVMNSLTVNLHSLLISFYKPTEKRFKILL---EKKAFPSDHYAIE--SQCKLHGISPENS 186 (465)
T ss_pred hhhhhhhhccCCchh----hhhHhhhhhHHHHHHHHhcCCcchhhhhhh---ccCCCCchHHHHH--hhhhhcCCChHHh
Confidence 345578899998753 433 3444445555667777654 3543 2233333222111 12333343221
Q ss_pred EeeeecCCCCCCCCHHHHHHHhccCCCcE--EEEeCC-C-CCccccHHHHHHHHHHcCCEEEEeccccccccccccccCC
Q 015609 276 SFPYKVNPQTGYIDYEKLEEKAMDYRPKI--LICGGS-S-YPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASP 351 (403)
Q Consensus 276 vv~~~vd~~~g~ID~d~Le~~i~~~~pkl--Viv~~s-~-~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p 351 (403)
.+.+...+....+..+++-+.|+++.-.+ |++.+. . +|...|+.+|...-+..|+++=.|-||+.|-++.-.+..
T Consensus 187 m~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdW- 265 (465)
T KOG3846|consen 187 MIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDW- 265 (465)
T ss_pred eEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeec-
Confidence 22233332223577788888887665444 444433 2 377899999996666779999999999999765322111
Q ss_pred CCcccEEEEcCcCCCc-CCce--EEEEEeC
Q 015609 352 FDYCDIVTSTTHKSLR-GPRG--GIIFFRR 378 (403)
Q Consensus 352 ~~~aDivt~StHKtL~-GP~G--G~I~~~~ 378 (403)
++|+.+-...|++. |+.| |+++-.+
T Consensus 266 --gVDFACWCSYKYlnaGaGgIgGlFvHek 293 (465)
T KOG3846|consen 266 --GVDFACWCSYKYLNAGAGGIGGLFVHEK 293 (465)
T ss_pred --CCceEEEeeecccccCCCccceeeeehh
Confidence 38999999999985 4443 5555433
No 384
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=93.63 E-value=0.33 Score=47.70 Aligned_cols=146 Identities=17% Similarity=0.101 Sum_probs=86.7
Q ss_pred eEEeCCh-HHHHHHHHhhhccCC-CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCCCCHHHHHHHh
Q 015609 220 NVQPYSC-TSANFAVYTGLLLPG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKA 297 (403)
Q Consensus 220 ~V~~~SG-T~An~aal~all~pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ID~d~Le~~i 297 (403)
++...-| -+.+.++++..+-|| ++|+..+..++ .. .+...-...+++.++.++ +..+|.|++.+.+
T Consensus 88 nic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtys-MY----------~v~A~iNd~eVvkvpl~p-dF~lnvdai~evl 155 (375)
T KOG0633|consen 88 NICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYS-MY----------VVDAAINDAEVVKVPLNP-DFSLNVDAIAEVL 155 (375)
T ss_pred ceEEecCcHHHHHHHHhheecCCccceeecCCcce-eE----------EEEeecCCceEEEecCCC-CccccHHHHHHHH
Confidence 4554444 468889999999999 88988876542 11 111111235667677776 5789999999988
Q ss_pred ccC-CCcEEEEeCCCC--CccccHHHHHHHHHH-cCCEEEEeccccccccccc-cccCCCCcccE-EEEcCcCCC--cCC
Q 015609 298 MDY-RPKILICGGSSY--PREWDYGRFRQIADK-CGAVLMCDMAHISGLIAAK-ELASPFDYCDI-VTSTTHKSL--RGP 369 (403)
Q Consensus 298 ~~~-~pklViv~~s~~--g~~~Di~~I~~Iake-~Ga~LivDaAh~~Glia~g-~~~~p~~~aDi-vt~StHKtL--~GP 369 (403)
+.. ++|++++..+.+ |..+-.+.|.+|-.- -+.++++|.|-.- +.+.+ ..+..-.|-.+ +.-|+.|.| .|-
T Consensus 156 ~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYid-Fsg~~S~~~lV~kYpNLivlqTlSKsfGLAGi 234 (375)
T KOG0633|consen 156 ELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYID-FSGVESRMKLVKKYPNLIVLQTLSKSFGLAGI 234 (375)
T ss_pred hccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEe-eccccccchHhHhCCceeehhhhhhhcCccee
Confidence 764 688887765554 445544455555432 2789999998432 11100 11111124444 455778885 344
Q ss_pred ceEEEEEeC
Q 015609 370 RGGIIFFRR 378 (403)
Q Consensus 370 ~GG~I~~~~ 378 (403)
+-|+-++..
T Consensus 235 RvG~~~~~~ 243 (375)
T KOG0633|consen 235 RVGYGAFPL 243 (375)
T ss_pred EeecccccH
Confidence 436655544
No 385
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=92.94 E-value=1.1 Score=46.37 Aligned_cols=57 Identities=19% Similarity=0.237 Sum_probs=35.9
Q ss_pred HHHHHHHHHHcCCEEEEeccccccccccccccCCCCc----ccEEEEcCcCCCcC--CceEEEEEeCC
Q 015609 318 YGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDY----CDIVTSTTHKSLRG--PRGGIIFFRRG 379 (403)
Q Consensus 318 i~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~----aDivt~StHKtL~G--P~GG~I~~~~~ 379 (403)
+++..++|+++|.++|.|.+|.. .--.| ....|+. -|++| .-|.|++ |- |++++..+
T Consensus 235 lka~~~~v~k~Ggl~IaDEVqtG-fGRtG-~~wgfe~h~v~PDIvT--mAKgiGnG~Pl-~AVvtt~E 297 (442)
T KOG1404|consen 235 LKAAYKVVRKRGGLFIADEVQTG-FGRTG-HMWGFESHGVVPDIVT--MAKGIGNGFPL-GAVVTTPE 297 (442)
T ss_pred HHHHHHHHHHcCCEEEehhhhhc-ccccc-ccccccccCCCccHHH--HHhhccCCCcc-eeeecCHH
Confidence 89999999999999999999863 11112 1122321 46664 5688853 33 44554443
No 386
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=92.54 E-value=1.3 Score=44.13 Aligned_cols=197 Identities=19% Similarity=0.202 Sum_probs=105.2
Q ss_pred cccceeccCccCcHHHHHHHHHHhhhcCCCCCC-CCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe--CChHH
Q 015609 152 KGIELIASENFVCRAVMEALGSHLTNKYSEGYP-GARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQP--YSCTS 228 (403)
Q Consensus 152 ~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~p-gsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~--~SGT~ 228 (403)
+.+++-|++..++..|+..+...+.|....|.. ..-.+.+.++...++. +...+++|++.+.. + .|.| .+||.
T Consensus 7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~-tes~lreLlniPdn-~--~vlf~QGGGt~ 82 (370)
T KOG2790|consen 7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIIND-TESLLRELLNIPDN-Y--KVLFLQGGGTG 82 (370)
T ss_pred ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHH-HHHHHHHHHcCCCc-e--eEEEEeCCCcc
Confidence 457888999999999999999888875443321 1122334555555554 67789999999864 2 3443 45665
Q ss_pred HHHHHHhhh--ccCC---CeEEecCCCCCccccccccCCccchhhhcccc--eEEeeeecCCCC--CCCCHHHHHHHhcc
Q 015609 229 ANFAVYTGL--LLPG---DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIF--FESFPYKVNPQT--GYIDYEKLEEKAMD 299 (403)
Q Consensus 229 An~aal~al--l~pG---D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~--~~vv~~~vd~~~--g~ID~d~Le~~i~~ 299 (403)
-.-++...| ++-| |-|++-.-.. +...-.++. ...+..+..+-+ ...|.+.++-.
T Consensus 83 qFaAv~lNL~glK~g~~AdYiVTGsWS~-------------KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~--- 146 (370)
T KOG2790|consen 83 QFAAVPLNLIGLKHGRCADYVVTGSWSA-------------KAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELN--- 146 (370)
T ss_pred cccccchhhhccccCCccceEEeccccH-------------HHHHHHHhhCCceEEeccccccccCcCCChhhcccC---
Confidence 444444444 3555 3444422110 111111111 111211111111 23455544321
Q ss_pred CCCcEEEEeCC--CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC--cccEEEEcCcCCCcCCce-EEE
Q 015609 300 YRPKILICGGS--SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD--YCDIVTSTTHKSLRGPRG-GII 374 (403)
Q Consensus 300 ~~pklViv~~s--~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~--~aDivt~StHKtL~GP~G-G~I 374 (403)
.+.+.|+.+.. .-|..+|.-. +-.-.|+++++|++. +.+..|++ .-+++....+|.+ ||.| -++
T Consensus 147 ~da~yvyyCaNETVHGVEf~~~P---~~~~~~~vlVaDmSS-------nflSrpvDvsk~gvi~aGAQKN~-G~aG~Tvv 215 (370)
T KOG2790|consen 147 PDASYVYYCANETVHGVEFDFIP---VNDPKGAVLVADMSS-------NFLSRPVDVSKFGVIFAGAQKNV-GPAGVTVV 215 (370)
T ss_pred CCccEEEEecCceeeceecCCCC---CCCCCCceEEEeccc-------chhcCCccchhcceEEecccccc-CccccEEE
Confidence 12345654433 2344333211 223469999999962 22335555 3678899999986 8988 444
Q ss_pred EEeCC
Q 015609 375 FFRRG 379 (403)
Q Consensus 375 ~~~~~ 379 (403)
+.++.
T Consensus 216 ivr~d 220 (370)
T KOG2790|consen 216 IVRKD 220 (370)
T ss_pred EEehh
Confidence 44553
No 387
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=91.61 E-value=0.34 Score=49.38 Aligned_cols=71 Identities=23% Similarity=0.328 Sum_probs=45.8
Q ss_pred HHHHHHHhccCC----C-cEEEEeC--C----CCCccccHHHHHHHHHHcCCEEEEecccccccccccccc----CCCCc
Q 015609 290 YEKLEEKAMDYR----P-KILICGG--S----SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELA----SPFDY 354 (403)
Q Consensus 290 ~d~Le~~i~~~~----p-klViv~~--s----~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~----~p~~~ 354 (403)
++++|++|.+++ | ..||+++ + ++....=+.++++|++++|+.++||.+|.-|-. .|.+. ..++.
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGa-TGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGA-TGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCc-cCceeeehhcCCCC
Confidence 678888887653 3 2345543 2 233333478999999999999999999986532 22211 11222
Q ss_pred -ccEEEEc
Q 015609 355 -CDIVTST 361 (403)
Q Consensus 355 -aDivt~S 361 (403)
.|+||||
T Consensus 334 PpD~vTFS 341 (484)
T KOG1405|consen 334 PPDVVTFS 341 (484)
T ss_pred Cccceehh
Confidence 8999876
No 388
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=91.01 E-value=0.62 Score=41.95 Aligned_cols=45 Identities=20% Similarity=0.141 Sum_probs=32.4
Q ss_pred HHHHHHcC----CCCCCCcceEEeC-ChHHHHHHHHhhhccCCCeEEecCCCCC
Q 015609 204 ERALKAFD----LDSDNWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSG 252 (403)
Q Consensus 204 erla~lfg----~~~~~~~v~V~~~-SGT~An~aal~all~pGD~VL~~~~ehg 252 (403)
+.+.+.+| .+++ +|+.+ ++++|+.+++.+++.|||.|++...-|.
T Consensus 103 ~~l~~~~g~~v~~~pd----~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 103 NFMAEARGGRVKFDAD----MIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred HHHHHHhCCCCccchh----heEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 34556656 3443 34444 5678999999999999999999886553
No 389
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=89.65 E-value=7.2 Score=40.51 Aligned_cols=206 Identities=15% Similarity=0.085 Sum_probs=93.2
Q ss_pred hhcccceeccCccCcHHHHHHHHHHhhhcCCCC-----CCCCccc-cchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe
Q 015609 150 QFKGIELIASENFVCRAVMEALGSHLTNKYSEG-----YPGARYY-TGNQYIDQIENLCFERALKAFDLDSDNWGVNVQP 223 (403)
Q Consensus 150 q~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG-----~pgsr~~-~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~ 223 (403)
+.++|.|--+--..+++=++. +..|..-.... ...-|.| +|..-+- ++|+..++++|++.+ +|+.
T Consensus 21 ka~~L~LdmtRGKPs~eQLdL-S~~lL~~~~~~~~~~dG~D~RNY~G~l~Gip----e~r~l~a~llgv~~~----~viv 91 (425)
T PF12897_consen 21 KAKGLKLDMTRGKPSPEQLDL-SNPLLDLPGSSDYLADGTDCRNYPGGLDGIP----EARELFAELLGVPPE----NVIV 91 (425)
T ss_dssp HHTT--EES---S--HHHHHG-GGGGGGSSTTCCBECTTEBTTSS-S-SS--H----HHHHHHHHHHTS-GG----GEEE
T ss_pred HHcCCCcccCCCCCCHHHHhh-hHHHhcCCCCccccCCCccccCCCCccCChH----HHHHHHHHHhCCCHH----HEEE
Confidence 445666666666666665554 22222221111 1123666 4443332 267889999999985 4554
Q ss_pred CChHHHHHHHHh--------hhc------cCC--CeEEecCCCCCccccccccCCccchhhhcccceEEeeeecCCCCCC
Q 015609 224 YSCTSANFAVYT--------GLL------LPG--DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGY 287 (403)
Q Consensus 224 ~SGT~An~aal~--------all------~pG--D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~vd~~~g~ 287 (403)
.|.+++++++- ++. ... -+.|++..-|-.|++ -.+..| ++.++++.++ .-
T Consensus 92 -~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa---------i~E~~G--iemi~VpM~~--dG 157 (425)
T PF12897_consen 92 -GGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA---------ITEHFG--IEMIPVPMTE--DG 157 (425)
T ss_dssp --SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH---------HHHHCT---EEEEEEEET--TE
T ss_pred -eccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH---------HHHhhC--cEEEecCCCC--CC
Confidence 33333333321 221 112 256888777766653 123334 5667776664 24
Q ss_pred CCHHHHHHHhccC-CCcEEEEeCC-C--CCccccHHHHHHHH----HHcCCEEEEeccccccccccc-cccCCCC-----
Q 015609 288 IDYEKLEEKAMDY-RPKILICGGS-S--YPREWDYGRFRQIA----DKCGAVLMCDMAHISGLIAAK-ELASPFD----- 353 (403)
Q Consensus 288 ID~d~Le~~i~~~-~pklViv~~s-~--~g~~~Di~~I~~Ia----ke~Ga~LivDaAh~~Glia~g-~~~~p~~----- 353 (403)
.|+|.+|+++.+. ..|-|++.+. + .|....=+.+.++| ...+-.++.|.|-++...... ....+++
T Consensus 158 PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~ 237 (425)
T PF12897_consen 158 PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDAC 237 (425)
T ss_dssp E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHH
T ss_pred CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHH
Confidence 8999999998643 2355666532 2 24444444455554 346899999999888776321 1111111
Q ss_pred ----ccc--EEEEcCcCC-CcCCceEEEEEeC
Q 015609 354 ----YCD--IVTSTTHKS-LRGPRGGIIFFRR 378 (403)
Q Consensus 354 ----~aD--ivt~StHKt-L~GP~GG~I~~~~ 378 (403)
.-| ++.+||.|. |.|-.-+++..+.
T Consensus 238 ~~AGnpdrv~~F~STSKITf~GaGva~~aaS~ 269 (425)
T PF12897_consen 238 AKAGNPDRVYVFASTSKITFPGAGVAFFAASE 269 (425)
T ss_dssp HHTT-TTSEEEEEESTTTS-TTSS-EEEEE-H
T ss_pred HHcCCCCeEEEEecccccccCCcceeeeecCH
Confidence 123 678899995 3332226665554
No 390
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=87.85 E-value=0.23 Score=48.88 Aligned_cols=88 Identities=22% Similarity=0.212 Sum_probs=62.7
Q ss_pred CCCCHHHHHHHhccCCCcEEEEeCC--C-C-Ccc-ccHHHHHHHHHHcCCEEEEecccccc------ccccccccCCCCc
Q 015609 286 GYIDYEKLEEKAMDYRPKILICGGS--S-Y-PRE-WDYGRFRQIADKCGAVLMCDMAHISG------LIAAKELASPFDY 354 (403)
Q Consensus 286 g~ID~d~Le~~i~~~~pklViv~~s--~-~-g~~-~Di~~I~~Iake~Ga~LivDaAh~~G------lia~g~~~~p~~~ 354 (403)
-.-|++.+++.+++..+..|++-.+ + + ++. ..+++|+.||-.|+++-+|..|-++- +++.+ .....
T Consensus 139 l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~---~~~gr 215 (432)
T KOG3843|consen 139 LITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAA---AECGR 215 (432)
T ss_pred HHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHH---hhhcc
Confidence 3578999999998878886654322 2 2 454 45999999999999999998864321 11111 11224
Q ss_pred ccEEEEcCcCCCcCCceEEEEE
Q 015609 355 CDIVTSTTHKSLRGPRGGIIFF 376 (403)
Q Consensus 355 aDivt~StHKtL~GP~GG~I~~ 376 (403)
+|.++-|..|.|.-|-||+|+.
T Consensus 216 ida~vqsldknf~vpvggaiia 237 (432)
T KOG3843|consen 216 IDAFVQSLDKNFMVPVGGAIIA 237 (432)
T ss_pred HHHHHHHhhhcceeecchhHhh
Confidence 8999999999999999988765
No 391
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=87.08 E-value=1.5 Score=43.96 Aligned_cols=211 Identities=18% Similarity=0.197 Sum_probs=110.0
Q ss_pred HhhhcccceeccCccCcHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCChH
Q 015609 148 QRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCT 227 (403)
Q Consensus 148 ~rq~~~l~LiaSen~~~p~V~eA~~s~l~~~y~eG~pgsr~~~G~~~~~~lE~~arerla~lfg~~~~~~~v~V~~~SGT 227 (403)
.|--+.|+.++--.-.+|+|.+|...-+..- +...|+ ..++|-+-|+...+.+-+++ ++++.+||+
T Consensus 47 ~~yLDCInNVaHvghchp~VV~A~~kQmat~----~tN~RF-----lhd~lv~cA~~l~stlPeLs-----vc~F~NSGS 112 (452)
T KOG1403|consen 47 TRYLDCINNVAHVGHCHPEVVRAGAKQMATI----STNNRF-----LHDELVQCARTLTSTLPELS-----VCFFVNSGS 112 (452)
T ss_pred ccHHHHhhhhhhcccCCHHHHHHHHHHHhHh----cccchh-----hHHHHHHHHHHHhhcCCCce-----EEEEecCCc
Confidence 3445678888777788999998876554321 222233 23566654444444444433 567778999
Q ss_pred HHHHHHHhhh---ccCCCeEEecCCCCCccccccc-cCCccchhhhcc-----cceEEeeee-c---------CCC--CC
Q 015609 228 SANFAVYTGL---LLPGDRIMGLDSPSGGHLSHGY-HTPGGKKVSAAS-----IFFESFPYK-V---------NPQ--TG 286 (403)
Q Consensus 228 ~An~aal~al---l~pGD~VL~~~~ehgghlsh~~-~~~~~~~v~~~g-----~~~~vv~~~-v---------d~~--~g 286 (403)
+||.++++.. .+-.| ||+++-.|.||++.-. +.|. +....+ -++.+.+.+ + .+. .+
T Consensus 113 EANDLALRLAR~ftkhqD-vItldHAYHGHl~s~mE~SPY--KF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~ 189 (452)
T KOG1403|consen 113 EANDLALRLARNFTKHQD-VITLDHAYHGHLQSVMEVSPY--KFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMG 189 (452)
T ss_pred hhhHHHHHHHHhhcccCc-eEEEechhccceeeeeeccce--eccCCCCcCCCceeEecCCccccccccccccCCcccch
Confidence 9999998754 33344 6677777888875210 0000 011000 112222211 0 000 01
Q ss_pred CCCHHHHHHHhccC---CCcE--EEEe--CCCCCcccc----HHHHHHHHHHcCCEEEEecccc-ccccccccccCCCC-
Q 015609 287 YIDYEKLEEKAMDY---RPKI--LICG--GSSYPREWD----YGRFRQIADKCGAVLMCDMAHI-SGLIAAKELASPFD- 353 (403)
Q Consensus 287 ~ID~d~Le~~i~~~---~pkl--Viv~--~s~~g~~~D----i~~I~~Iake~Ga~LivDaAh~-~Glia~g~~~~p~~- 353 (403)
..=-+.+++.+.+. .-++ .+.. .|.-|.++| ++.+++..+.+|-++|.|..|. +|-+... ...+.
T Consensus 190 ~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~h--yWafq~ 267 (452)
T KOG1403|consen 190 ALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSH--YWAFQT 267 (452)
T ss_pred hhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchh--hhhhhh
Confidence 11123455554321 1121 1221 122334433 6777888889999999999986 4444322 12222
Q ss_pred --c-ccEEEEcCcCCC-cCCceEEEEEeCC
Q 015609 354 --Y-CDIVTSTTHKSL-RGPRGGIIFFRRG 379 (403)
Q Consensus 354 --~-aDivt~StHKtL-~GP~GG~I~~~~~ 379 (403)
. -||++. -|-+ .|.+-+++++.++
T Consensus 268 y~fiPDIVtm--gKpmGNGhPVa~Vattke 295 (452)
T KOG1403|consen 268 YNFIPDIVTM--GKPMGNGHPVAAVATTKE 295 (452)
T ss_pred hccccchhee--cccCCCCCeeeEEeccHH
Confidence 1 577764 4554 3555577877775
No 392
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=84.52 E-value=9.5 Score=39.09 Aligned_cols=218 Identities=20% Similarity=0.220 Sum_probs=116.1
Q ss_pred HHHHHHHHHHh-hhcccceecc-------CccCcHHHHHHHHHHhhhcCCCCCCCCccc--cchHHHHHHHHHHHHHHHH
Q 015609 139 IFDIMEKEKQR-QFKGIELIAS-------ENFVCRAVMEALGSHLTNKYSEGYPGARYY--TGNQYIDQIENLCFERALK 208 (403)
Q Consensus 139 i~~li~~e~~r-q~~~l~LiaS-------en~~~p~V~eA~~s~l~~~y~eG~pgsr~~--~G~~~~~~lE~~arerla~ 208 (403)
|..+.+.-+.. ...+|+|-.+ .-|+-|.|++|-....... ....|. .|. .++-++ .++-
T Consensus 39 ILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~-----ldKEYlpI~Gl---~eF~k~---sakL 107 (427)
T KOG1411|consen 39 ILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLS-----LDKEYLPITGL---AEFNKL---SAKL 107 (427)
T ss_pred cccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhc-----ccchhccccch---HHHHHH---HHHH
Confidence 44444443222 3456777665 2345788888866544311 111111 222 222222 1223
Q ss_pred HcCCCCCCC----cceEEeCChHHHHHHH--HhhhccCCCeEEecCCCCCccccccccCCccchhhhcccceEE-eeeec
Q 015609 209 AFDLDSDNW----GVNVQPYSCTSANFAV--YTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFES-FPYKV 281 (403)
Q Consensus 209 lfg~~~~~~----~v~V~~~SGT~An~aa--l~all~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~v-v~~~v 281 (403)
+||...... -+.+|..|||.|+-.. +.+..-++..|.++.+..|-|.. + ....|..++. .+|
T Consensus 108 a~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~---i------f~~ag~~~~~yrYy-- 176 (427)
T KOG1411|consen 108 ALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKN---I------FKDAGLPVKFYRYY-- 176 (427)
T ss_pred hhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCc---c------ccccCcceeeeeec--
Confidence 455432100 0356777998876543 44445567788888887766531 1 1223433322 333
Q ss_pred CCCCCCCCHHHHHHHhccCCC-cEEEEeCC-C--C---CccccHHHHHHHHHHcCCEEEEeccccccccccccccCCC--
Q 015609 282 NPQTGYIDYEKLEEKAMDYRP-KILICGGS-S--Y---PREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF-- 352 (403)
Q Consensus 282 d~~~g~ID~d~Le~~i~~~~p-klViv~~s-~--~---g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~-- 352 (403)
++++..+|++.+-+.+.+... .+|++... . + ++..-+++|.++.++.+.+-++|+| .-|+..+.......
T Consensus 177 d~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmA-YQGfaSG~~d~DA~av 255 (427)
T KOG1411|consen 177 DPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMA-YQGFASGDLDKDAQAV 255 (427)
T ss_pred cccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhh-hcccccCCchhhHHHH
Confidence 346788999987777765433 34554321 2 3 2344689999999999999999997 44543222211110
Q ss_pred -----Cccc-EEEEcCcCCC--cCCceEEE--EEeCC
Q 015609 353 -----DYCD-IVTSTTHKSL--RGPRGGII--FFRRG 379 (403)
Q Consensus 353 -----~~aD-ivt~StHKtL--~GP~GG~I--~~~~~ 379 (403)
+..+ +++-|+-|.+ +|-+-|.+ +|++.
T Consensus 256 R~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~a 292 (427)
T KOG1411|consen 256 RLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDA 292 (427)
T ss_pred HHHHHcCCceEeehhhhhhcchhhhccceeEEEecCH
Confidence 0123 4566888985 45554444 56553
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=81.62 E-value=5.9 Score=43.56 Aligned_cols=150 Identities=15% Similarity=0.097 Sum_probs=80.6
Q ss_pred HHHHHHcCCCCCCCcceEE-eCChHHHHHHHHhhh-ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeeec
Q 015609 204 ERALKAFDLDSDNWGVNVQ-PYSCTSANFAVYTGL-LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKV 281 (403)
Q Consensus 204 erla~lfg~~~~~~~v~V~-~~SGT~An~aal~al-l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~v 281 (403)
-.++++-|++-+ |-. .--||.|-.++..+. ..++.++++....|.-.++. +......|.+. +
T Consensus 170 Tmi~dlTGL~~a----NASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV---------~~TRa~~~~i~---v 233 (1001)
T KOG2040|consen 170 TMITDLTGLPMA----NASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSV---------VKTRAKGFGIK---V 233 (1001)
T ss_pred HhhhhccCCccc----chhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhh---------hhcccccccee---E
Confidence 346677777653 221 224787777766554 34556777777665443321 11111111111 1
Q ss_pred CCCCCCCCHHHHHHHhccCCCcEEEEe-CCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC-cccEEE
Q 015609 282 NPQTGYIDYEKLEEKAMDYRPKILICG-GSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVT 359 (403)
Q Consensus 282 d~~~g~ID~d~Le~~i~~~~pklViv~-~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~-~aDivt 359 (403)
...|+.+.-.-.+ ...-|++- +...|.+.|+.++.+.+++.|..+++-. - +.+.-.+..|-+ ++||++
T Consensus 234 ----~~~~~~~~~~s~~--~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~at-D---LLaLtiLrpPgefGaDIav 303 (1001)
T KOG2040|consen 234 ----VVSDIKEADYSSK--DVSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMAT-D---LLALTILRPPGEFGADIAV 303 (1001)
T ss_pred ----EecCHHHhhcccc--ceeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEee-h---hhHHHccCChhhcCceeee
Confidence 1233333222111 11223343 3356889999999999999998866532 1 222222334444 499999
Q ss_pred EcCcCC-----CcCCceEEEEEeCC
Q 015609 360 STTHKS-----LRGPRGGIIFFRRG 379 (403)
Q Consensus 360 ~StHKt-----L~GP~GG~I~~~~~ 379 (403)
+|++.. .+||..|++.++..
T Consensus 304 GSsQRFGVPlGYGGPHAaFfAv~~~ 328 (1001)
T KOG2040|consen 304 GSSQRFGVPLGYGGPHAAFFAVSES 328 (1001)
T ss_pred ccccccCccccCCCchHHHHHHHHH
Confidence 999983 14566677776643
No 394
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=77.87 E-value=15 Score=37.24 Aligned_cols=144 Identities=15% Similarity=0.111 Sum_probs=82.6
Q ss_pred eEEeCChHHHHHHHHhhh--ccCCCeEEecCCCCCccccccccCCccchhhhcccceEEeeee-cCCCCCCCCHHHHHHH
Q 015609 220 NVQPYSCTSANFAVYTGL--LLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYK-VNPQTGYIDYEKLEEK 296 (403)
Q Consensus 220 ~V~~~SGT~An~aal~al--l~pGD~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv~~~-vd~~~g~ID~d~Le~~ 296 (403)
.||..|||.|+.++..=+ +-+..+|.++.+....|. .. ..-.|. ..+..|+ +|.++..+|++.+...
T Consensus 102 ~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~--~i-------f~~aGf-~tv~~Y~yWd~~~k~~d~e~~Lsd 171 (410)
T KOG1412|consen 102 GVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHH--AI-------FEKAGF-TTVATYPYWDAENKCVDLEGFLSD 171 (410)
T ss_pred ceeeccccchhhhhHHHHHHhcccceeEecCCchhHHH--HH-------HHHcCC-ceeeeeeeecCCCceecHHHHHHH
Confidence 477889999998764322 233456888877766552 11 122231 1222222 3444567999999888
Q ss_pred hccCCCc-EEEEeCC-C--CCc---cccHHHHHHHHHHcCCEEEEeccccccccccccccCCC------Cc-c-cEEEEc
Q 015609 297 AMDYRPK-ILICGGS-S--YPR---EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPF------DY-C-DIVTST 361 (403)
Q Consensus 297 i~~~~pk-lViv~~s-~--~g~---~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~------~~-a-Divt~S 361 (403)
++....+ ++++... . +|. .--+..|++..++.+...+.|.| .=|+..++.....+ +. . =+|+-|
T Consensus 172 l~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiA-YQGfASGD~~~DawAiR~fV~~g~e~fv~QS 250 (410)
T KOG1412|consen 172 LESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIA-YQGFASGDLDADAWAIRYFVEQGFELFVCQS 250 (410)
T ss_pred HhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehh-hcccccCCccccHHHHHHHHhcCCeEEEEhh
Confidence 8754334 4444332 2 332 23488899999999999999997 44543322211111 11 1 166779
Q ss_pred CcCCC--cCCceEEE
Q 015609 362 THKSL--RGPRGGII 374 (403)
Q Consensus 362 tHKtL--~GP~GG~I 374 (403)
+-|.| +++|-|.+
T Consensus 251 FaKNfGlYneRvGnl 265 (410)
T KOG1412|consen 251 FAKNFGLYNERVGNL 265 (410)
T ss_pred hhhhcccccccccce
Confidence 99985 56774433
No 395
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=73.36 E-value=13 Score=30.82 Aligned_cols=63 Identities=16% Similarity=0.065 Sum_probs=46.0
Q ss_pred ceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHc--CCEEEEeccccc
Q 015609 273 FFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKC--GAVLMCDMAHIS 340 (403)
Q Consensus 273 ~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~--Ga~LivDaAh~~ 340 (403)
++++..++. .++.+++.+.+.+.+|++|.++.+.........++.+.+|+. ++.+++=+.|..
T Consensus 28 G~~v~~~d~-----~~~~~~l~~~~~~~~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~t 92 (121)
T PF02310_consen 28 GHEVDILDA-----NVPPEELVEALRAERPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPHAT 92 (121)
T ss_dssp TBEEEEEES-----SB-HHHHHHHHHHTTCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESSSG
T ss_pred CCeEEEECC-----CCCHHHHHHHHhcCCCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCchh
Confidence 456666554 356699999888889999888754555556677788777776 789999888765
No 396
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=65.50 E-value=25 Score=29.42 Aligned_cols=63 Identities=11% Similarity=-0.033 Sum_probs=44.5
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHc---CCEEEEecccc
Q 015609 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKC---GAVLMCDMAHI 339 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~---Ga~LivDaAh~ 339 (403)
.+|+++.+. ..+.++++.+.+.+.+|++|.++.+......++.++.+.+++. ++.+++=+.+.
T Consensus 26 ~G~~V~~lg-----~~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~ 91 (119)
T cd02067 26 AGFEVIDLG-----VDVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIV 91 (119)
T ss_pred CCCEEEECC-----CCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 346665544 2477888888888889999988766566667788888888876 45566655543
No 397
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=64.91 E-value=14 Score=37.82 Aligned_cols=58 Identities=17% Similarity=0.265 Sum_probs=43.1
Q ss_pred CCCC-CHHHHHHHhcc----CCCcEEEEeC-----C-CCC-ccccHHHHHHHHHHcCCEEEEeccccccc
Q 015609 285 TGYI-DYEKLEEKAMD----YRPKILICGG-----S-SYP-REWDYGRFRQIADKCGAVLMCDMAHISGL 342 (403)
Q Consensus 285 ~g~I-D~d~Le~~i~~----~~pklViv~~-----s-~~g-~~~Di~~I~~Iake~Ga~LivDaAh~~Gl 342 (403)
+|.- +++++..+++. .+++++++.. . .|+ ...|+..|..+-+.++.++++|.+|+.|.
T Consensus 215 ~G~~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 215 RGMAATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 4544 88887776643 2457887753 2 455 46899999999777899999999999985
No 398
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=63.47 E-value=16 Score=37.43 Aligned_cols=57 Identities=19% Similarity=0.306 Sum_probs=43.8
Q ss_pred CCC-CCHHHHHHHhcc----CCCcEEEEe--CCCCCc----cccHHHHHHHHHHcCCEEEEecccccc
Q 015609 285 TGY-IDYEKLEEKAMD----YRPKILICG--GSSYPR----EWDYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 285 ~g~-ID~d~Le~~i~~----~~pklViv~--~s~~g~----~~Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
+|. .++++++.+++. ..++++++. .+.|+. ..|+..|..+-+.++.++++|.+|+.|
T Consensus 232 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 232 RGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 565 688888877643 235788874 455552 369999999988899999999999998
No 399
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=61.59 E-value=22 Score=34.73 Aligned_cols=57 Identities=14% Similarity=0.223 Sum_probs=43.1
Q ss_pred CCCC-CHHHHHHHhccC----CCcEEEEe--CCCC-Cc---cccHHHHHHHHHHcCCEEEEecccccc
Q 015609 285 TGYI-DYEKLEEKAMDY----RPKILICG--GSSY-PR---EWDYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 285 ~g~I-D~d~Le~~i~~~----~pklViv~--~s~~-g~---~~Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
+|.. ++++++.+++.. ..+++++. .+.| +. ..|+..|..+.+.++.++++|.+|+.|
T Consensus 139 ~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 139 RGMGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 4544 888888776532 34677764 4466 53 679999999988889999999999988
No 400
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=60.46 E-value=21 Score=34.93 Aligned_cols=58 Identities=21% Similarity=0.294 Sum_probs=43.9
Q ss_pred CC-CCCHHHHHHHhcc----CCCcEEEEe--CCCCC---c-cccHHHHHHHHHHcCCEEEEeccccccc
Q 015609 285 TG-YIDYEKLEEKAMD----YRPKILICG--GSSYP---R-EWDYGRFRQIADKCGAVLMCDMAHISGL 342 (403)
Q Consensus 285 ~g-~ID~d~Le~~i~~----~~pklViv~--~s~~g---~-~~Di~~I~~Iake~Ga~LivDaAh~~Gl 342 (403)
+| ..++++++.+++. ..++++++. .+.|+ + ..|+..|..+.+..+.++++|.+|+.|.
T Consensus 129 ~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 129 RGLMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 45 7888888776653 235788775 34565 2 6789999888888999999999999984
No 401
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=58.87 E-value=32 Score=30.25 Aligned_cols=60 Identities=15% Similarity=0.126 Sum_probs=43.6
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHc---CCEEEEec
Q 015609 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKC---GAVLMCDM 336 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~---Ga~LivDa 336 (403)
.+|+++++.. .+-++++.+.+.+.+|++|.++.........++++.+..++. ++.+++=+
T Consensus 30 ~G~eVi~LG~-----~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG 92 (137)
T PRK02261 30 AGFEVINLGV-----MTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGG 92 (137)
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 4578887764 367899999888888999888766666666778888777776 45555544
No 402
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional
Probab=58.71 E-value=46 Score=30.68 Aligned_cols=64 Identities=17% Similarity=0.080 Sum_probs=42.9
Q ss_pred CCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEecccccccccccccc
Q 015609 286 GYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELA 349 (403)
Q Consensus 286 g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~ 349 (403)
..+.++.+.++|++.+--+++++.-......-.+++.+++++.+++++.=.-..-|++..|+.+
T Consensus 20 ~~~~p~~aa~lI~~AKrPlIivG~ga~~~~ea~e~l~elaEkl~iPVvtT~~~~~~~~~kgv~~ 83 (171)
T PRK00945 20 KIVSPKIAAMMIKKAKRPLLVVGSLLLDDEELLDRAVKIAKKANIPVAATGGSYKGLIDKGVDA 83 (171)
T ss_pred cccCHHHHHHHHHhCCCcEEEECcCccccchHHHHHHHHHHHHCCCEEEccccccccccCCccC
Confidence 3578899988887654446666643322123477899999999999998775455555554443
No 403
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=56.05 E-value=29 Score=30.43 Aligned_cols=60 Identities=17% Similarity=0.158 Sum_probs=44.4
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCC---EEEEec
Q 015609 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGA---VLMCDM 336 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga---~LivDa 336 (403)
.+|+++...++ +.++++-+.+.++++.+|.++.-.......++++.+..++.|. ++++=+
T Consensus 26 ~GfeVidLG~~-----v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG 88 (128)
T cd02072 26 AGFNVVNLGVL-----SPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGG 88 (128)
T ss_pred CCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEEC
Confidence 45788877654 6788988888888999887765555566778899988888754 455544
No 404
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=55.50 E-value=34 Score=31.85 Aligned_cols=61 Identities=13% Similarity=0.124 Sum_probs=47.6
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcC----CEEEEecc
Q 015609 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCG----AVLMCDMA 337 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~G----a~LivDaA 337 (403)
.+|+++++..+ +.++++.+.+.+.+|++|.++.+.+.....++++.+..++.| +.+++=++
T Consensus 111 ~G~~vi~LG~~-----vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~ 175 (197)
T TIGR02370 111 NGFDVIDLGRD-----VPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGA 175 (197)
T ss_pred CCcEEEECCCC-----CCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEECh
Confidence 45888887654 778999999999999999888776666677888888888874 56777664
No 405
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=54.79 E-value=28 Score=29.91 Aligned_cols=49 Identities=18% Similarity=0.152 Sum_probs=39.8
Q ss_pred CCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEe
Q 015609 286 GYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCD 335 (403)
Q Consensus 286 g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivD 335 (403)
..+++++++.++.+ +|.+|+++.-.+|+.-=.++-.+.+++.++-+++=
T Consensus 47 Hkl~~eEle~~lee-~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 47 HKLALEELEELLEE-GPEVIVVGTGQSGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred cccCHHHHHHHHhc-CCcEEEEecCceeEEEeCHHHHHHHHhcCCeEEEe
Confidence 46999999999985 78889998778887665677788999988777653
No 406
>COG2877 KdsA 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase [Cell envelope biogenesis, outer membrane]
Probab=52.88 E-value=27 Score=34.09 Aligned_cols=41 Identities=24% Similarity=0.417 Sum_probs=30.5
Q ss_pred CCCcEEEEe-CCCCCc---cccHHHHHHHHHHcCCEEEEecccccc
Q 015609 300 YRPKILICG-GSSYPR---EWDYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 300 ~~pklViv~-~s~~g~---~~Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
-++++++++ ++++|. +.|+..+. |-++.|++++.|++|+.=
T Consensus 158 gn~~v~lcERG~sFGYnnLV~DMrsl~-iM~~~~~PViFDaTHSvQ 202 (279)
T COG2877 158 GNNKVILCERGASFGYNNLVVDMRSLP-IMKEFGAPVIFDATHSVQ 202 (279)
T ss_pred CCCcEEEEeccCccCcchhHHHhhhhH-HHHHcCCCeEEeccccee
Confidence 357888886 556664 45666654 668899999999999974
No 407
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=51.67 E-value=36 Score=30.08 Aligned_cols=55 Identities=18% Similarity=0.179 Sum_probs=41.4
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCC
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGA 330 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga 330 (403)
..+|+++...++ +.++++-+.+.++++.+|.++.-.......++++.+.+++.|.
T Consensus 27 ~~GfeVi~LG~~-----v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 27 NAGFNVVNLGVL-----SPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred HCCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCC
Confidence 345888877654 6789998888888899887765444555678899988888864
No 408
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=51.14 E-value=37 Score=29.20 Aligned_cols=52 Identities=13% Similarity=0.028 Sum_probs=39.5
Q ss_pred CCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEecccc
Q 015609 287 YIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 287 ~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
.++.++++.++.. .|.+|+++.-..+....-.++.+..++.|+-+++-.+.+
T Consensus 45 ~l~~~~l~~ll~~-~peivliGTG~~~~~~~~~~~~~~l~~~Gi~ve~m~T~a 96 (117)
T cd05126 45 GLQPEELEELLEE-GVEVIVIGTGQSGALKVPPETVEKLEKRGVEVLVLPTEE 96 (117)
T ss_pred cCCHHHHHHHHhc-CCCEEEEcCCCCccccCCHHHHHHHHhcCCEEEEcChHH
Confidence 5899999999975 699999987666654444566678888999998866533
No 409
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=50.44 E-value=34 Score=33.57 Aligned_cols=54 Identities=17% Similarity=0.300 Sum_probs=36.3
Q ss_pred CCCCHHHHHHHhc----cCCCcEEEEe-CCCCCc---cccHHHHHHHHHHcCCEEEEeccccc
Q 015609 286 GYIDYEKLEEKAM----DYRPKILICG-GSSYPR---EWDYGRFRQIADKCGAVLMCDMAHIS 340 (403)
Q Consensus 286 g~ID~d~Le~~i~----~~~pklViv~-~s~~g~---~~Di~~I~~Iake~Ga~LivDaAh~~ 340 (403)
..+.+++....++ .-+++++++. +..++. ..|+..|.-+ |+.+.++++|.+|++
T Consensus 125 ~~~t~~e~l~aaeyi~~~Gn~~viLcERG~tf~y~r~~~D~~~ip~~-k~~~~PVi~DpSHsv 186 (258)
T TIGR01362 125 QFLSPWDMKNVVEKVLSTGNKNILLCERGTSFGYNNLVVDMRSLPIM-RELGCPVIFDATHSV 186 (258)
T ss_pred CcCCHHHHHHHHHHHHHcCCCcEEEEeCCCCcCCCCcccchhhhHHH-HhcCCCEEEeCCccc
Confidence 3567776544443 3457888885 234332 5788888755 556999999999984
No 410
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=49.40 E-value=55 Score=27.08 Aligned_cols=64 Identities=14% Similarity=0.031 Sum_probs=43.8
Q ss_pred ceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHc--CCEEEEecccccc
Q 015609 273 FFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKC--GAVLMCDMAHISG 341 (403)
Q Consensus 273 ~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~--Ga~LivDaAh~~G 341 (403)
++++..+.. ....+.+.+.+.+.+|++|.++.+.......++.+.++.++. ++.+++=+.|...
T Consensus 27 G~~v~~l~~-----~~~~~~~~~~i~~~~pdiV~iS~~~~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~t~ 92 (125)
T cd02065 27 GFEVIDLGV-----DVPPEEIVEAAKEEDADVVGLSALSTTHMEAMKLVIEALKELGIDIPVVVGGAHPTA 92 (125)
T ss_pred CCEEEEcCC-----CCCHHHHHHHHHHcCCCEEEEecchHhHHHHHHHHHHHHHhcCCCCeEEEeCCcCCc
Confidence 355555432 346677777777778999888765544445677777777777 4888888876664
No 411
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=49.06 E-value=49 Score=30.72 Aligned_cols=61 Identities=16% Similarity=0.077 Sum_probs=45.9
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcC----CEEEEecc
Q 015609 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCG----AVLMCDMA 337 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~G----a~LivDaA 337 (403)
.+|+++++.. .+.++++.+.+.+.+|++|.++.+.......++++.+..++.+ +.+++=+.
T Consensus 109 ~G~~vi~lG~-----~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~ 173 (201)
T cd02070 109 NGFEVIDLGR-----DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGA 173 (201)
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECC
Confidence 4577776653 3778999999988899999887766666677888888877764 56777664
No 412
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=47.90 E-value=53 Score=27.89 Aligned_cols=60 Identities=10% Similarity=-0.033 Sum_probs=41.6
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHc---CCEEEEec
Q 015609 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKC---GAVLMCDM 336 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~---Ga~LivDa 336 (403)
.+|++++... .+.++++.+.+.+.+|++|+++.+.......++++.+..++. ++.+++=+
T Consensus 26 ~G~~vi~lG~-----~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG 88 (122)
T cd02071 26 AGFEVIYTGL-----RQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGG 88 (122)
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 3467776543 477888888888888999888765554555678877777776 45566554
No 413
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=45.13 E-value=79 Score=31.91 Aligned_cols=60 Identities=22% Similarity=0.216 Sum_probs=39.9
Q ss_pred cCCCCCCCCHHHHHHHhccC-----CCcEEEEeCCCCC-c-cccHHHHHHHHHHcCCEEEEeccccc
Q 015609 281 VNPQTGYIDYEKLEEKAMDY-----RPKILICGGSSYP-R-EWDYGRFRQIADKCGAVLMCDMAHIS 340 (403)
Q Consensus 281 vd~~~g~ID~d~Le~~i~~~-----~pklViv~~s~~g-~-~~Di~~I~~Iake~Ga~LivDaAh~~ 340 (403)
++..+-.|+.++++..++.. .-.+|++.+|.=+ . ...+.++.++|++.|+.+++|.+..+
T Consensus 104 in~~Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~~ 170 (310)
T COG1105 104 INFPGPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSGEA 170 (310)
T ss_pred ecCCCCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChHH
Confidence 33334568877777765432 1256666654322 2 33589999999999999999998654
No 414
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=45.13 E-value=43 Score=32.87 Aligned_cols=57 Identities=18% Similarity=0.262 Sum_probs=40.6
Q ss_pred CCC-CCHHHHHHHhcc----CCCcEEEEe-----CCCCC-ccccHHHHHHHHHHcCCEEEEecccccc
Q 015609 285 TGY-IDYEKLEEKAMD----YRPKILICG-----GSSYP-REWDYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 285 ~g~-ID~d~Le~~i~~----~~pklViv~-----~s~~g-~~~Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
+|. .+++++..+++. .+++++++. .++|+ ...|+..|..+-+..+.++++|.+|+.|
T Consensus 141 ~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 141 RGMSATLEEWLYAAEYIMSEGNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 454 477777766543 245676664 23565 3568888888877789999999999998
No 415
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=44.94 E-value=57 Score=30.84 Aligned_cols=61 Identities=18% Similarity=0.144 Sum_probs=45.4
Q ss_pred ccceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcC--CEEEEec
Q 015609 271 SIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCG--AVLMCDM 336 (403)
Q Consensus 271 g~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~G--a~LivDa 336 (403)
..+|+++++..+ +.++++.+.+.+.+|++|.++.+.......++++.+..++.| +.+++=+
T Consensus 114 ~~G~~Vi~LG~~-----vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~vGG 176 (213)
T cd02069 114 NNGYEVIDLGVM-----VPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLIGG 176 (213)
T ss_pred hCCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 345788887654 789999999999999999887666666667788777777664 5555544
No 416
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=44.25 E-value=18 Score=34.33 Aligned_cols=28 Identities=18% Similarity=0.281 Sum_probs=25.0
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015609 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...+++++.+.||++|+.||+|.+
T Consensus 46 ~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 46 PRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp TTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cccchhhhhhhhhhccccccceEEEeee
Confidence 4667778999999999999999999986
No 417
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=43.13 E-value=64 Score=33.88 Aligned_cols=34 Identities=12% Similarity=0.133 Sum_probs=26.0
Q ss_pred cEEEEeCCCCCccccHHHHHHHHHHcCCEEEEec
Q 015609 303 KILICGGSSYPREWDYGRFRQIADKCGAVLMCDM 336 (403)
Q Consensus 303 klViv~~s~~g~~~Di~~I~~Iake~Ga~LivDa 336 (403)
++||++--.=|...+++.+.++||+.|.++++|-
T Consensus 145 ~~vVLSDY~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 145 DALVLSDYAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred CEEEEeccccccchhHHHHHHHHHHcCCcEEECC
Confidence 5566532222567789999999999999999985
No 418
>TIGR03275 methan_mark_8 putative methanogenesis marker protein 8. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=41.55 E-value=8.9 Score=37.28 Aligned_cols=83 Identities=24% Similarity=0.307 Sum_probs=53.4
Q ss_pred cCCCCCCCCH-HHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEE
Q 015609 281 VNPQTGYIDY-EKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVT 359 (403)
Q Consensus 281 vd~~~g~ID~-d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt 359 (403)
+|+++..||. .-++.+++.--.++.+.-. ...|.++|+++=.++|.-+++=++|..|.-... ...-++++|+++
T Consensus 142 Ld~~tA~IDq~~Gv~~Aie~Gyk~IaVTv~----~~~~a~~iRe~e~~~~~~~~if~VHtTGis~ee-a~~~~~~aDivt 216 (259)
T TIGR03275 142 LDPDTATIDQIKGVEKAIELGYKKIAVTVA----DAEDAKAIRELESESGIDIIIFAVHTTGIDRED-AEEVVQYADIVT 216 (259)
T ss_pred eCCccccccHHHHHHHHHHcCCceEEEEec----CHHHHHHHHHhccccCCcEEEEEEECCCCCHHH-HHHHHHhhhHHH
Confidence 3455566764 4555565532223333221 235788888888888889999899999963221 112345799999
Q ss_pred EcCcCCCcC
Q 015609 360 STTHKSLRG 368 (403)
Q Consensus 360 ~StHKtL~G 368 (403)
+++.|+++.
T Consensus 217 ~CASK~ire 225 (259)
T TIGR03275 217 SCASKNIRE 225 (259)
T ss_pred HhchHHHHH
Confidence 999999863
No 419
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=41.22 E-value=65 Score=32.07 Aligned_cols=55 Identities=20% Similarity=0.356 Sum_probs=36.2
Q ss_pred CCCCHHHHHHHhc----cCCCcEEEEe-CCC--CC-ccccHHHHHHHHHH-cCCEEEEeccccc
Q 015609 286 GYIDYEKLEEKAM----DYRPKILICG-GSS--YP-REWDYGRFRQIADK-CGAVLMCDMAHIS 340 (403)
Q Consensus 286 g~ID~d~Le~~i~----~~~pklViv~-~s~--~g-~~~Di~~I~~Iake-~Ga~LivDaAh~~ 340 (403)
..+.+++....++ .-+++++++. +.. |. .+.|+..|..+-+. -+.++++|.+|++
T Consensus 139 qf~s~~e~~~aae~i~~~Gn~~vilcERG~~fgy~~~~~D~~~ip~mk~~~t~lPVi~DpSHsv 202 (281)
T PRK12457 139 QFMSPTQMKHVVSKCREAGNDRVILCERGSSFGYDNLVVDMLGFRQMKRTTGDLPVIFDVTHSL 202 (281)
T ss_pred CcCCHHHHHHHHHHHHHcCCCeEEEEeCCCCCCCCCcccchHHHHHHHhhCCCCCEEEeCCccc
Confidence 3466666554443 3357888885 222 33 35788888765543 3999999999984
No 420
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=41.13 E-value=49 Score=35.63 Aligned_cols=92 Identities=21% Similarity=0.183 Sum_probs=57.4
Q ss_pred CCCCHHHHHHHhccC-----CCcEEE--EeCCCCCccccHHHHHHHHHHcC-CEEEEeccccccccccccccCCCC----
Q 015609 286 GYIDYEKLEEKAMDY-----RPKILI--CGGSSYPREWDYGRFRQIADKCG-AVLMCDMAHISGLIAAKELASPFD---- 353 (403)
Q Consensus 286 g~ID~d~Le~~i~~~-----~pklVi--v~~s~~g~~~Di~~I~~Iake~G-a~LivDaAh~~Glia~g~~~~p~~---- 353 (403)
|.||.-.+++.+.+. +|-++| ++.+-.|..-.+-+|.+||+++. .||+.-+ |++.......-.+-+.
T Consensus 272 griDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakfWLHasG-haiAALt~aepnnil~HV~e 350 (838)
T KOG0630|consen 272 GRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKFWLHASG-HAIAALTCAEPNNILGHVEE 350 (838)
T ss_pred ccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeecc-chhhheeecCcccchhHHHH
Confidence 579999999988652 343333 24555677777899999999886 8888776 3332221111011111
Q ss_pred cccEEEEcCcCCCcCCceEEEEEeC
Q 015609 354 YCDIVTSTTHKSLRGPRGGIIFFRR 378 (403)
Q Consensus 354 ~aDivt~StHKtL~GP~GG~I~~~~ 378 (403)
..|.++...--||+-|..-+++..+
T Consensus 351 qldSMal~ialWLGiPSaPiV~LHR 375 (838)
T KOG0630|consen 351 QLDSMALNIALWLGIPSAPIVLLHR 375 (838)
T ss_pred HHhhccchhHHHhCCCCCceEEeec
Confidence 2677877777888767665555444
No 421
>smart00642 Aamy Alpha-amylase domain.
Probab=40.68 E-value=26 Score=31.76 Aligned_cols=27 Identities=15% Similarity=0.243 Sum_probs=23.7
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEecc
Q 015609 311 SYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
.+|...+++++.+-||++|+.+++|.+
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 456678899999999999999999985
No 422
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=39.55 E-value=61 Score=31.97 Aligned_cols=54 Identities=19% Similarity=0.284 Sum_probs=35.9
Q ss_pred CCCCHHHHHHHhc----cCCCcEEEEe-CCCCC---ccccHHHHHHHHHHcCCEEEEeccccc
Q 015609 286 GYIDYEKLEEKAM----DYRPKILICG-GSSYP---REWDYGRFRQIADKCGAVLMCDMAHIS 340 (403)
Q Consensus 286 g~ID~d~Le~~i~----~~~pklViv~-~s~~g---~~~Di~~I~~Iake~Ga~LivDaAh~~ 340 (403)
....++++...++ .-++++++++ +.+++ .+.|+..|.- .++.+.++++|.+|+.
T Consensus 133 ~~~t~~e~~~aaeyi~~~Gn~~vilcERG~tf~y~r~~~D~~~vp~-~k~~~lPVi~DpSHsv 194 (264)
T PRK05198 133 QFLAPWDMKNVVDKVREAGNDKIILCERGTSFGYNNLVVDMRGLPI-MRETGAPVIFDATHSV 194 (264)
T ss_pred CcCCHHHHHHHHHHHHHcCCCeEEEEeCCCCcCCCCeeechhhhHH-HhhCCCCEEEeCCccc
Confidence 4567766654443 3457888886 23443 2468887774 4567899999999983
No 423
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=39.40 E-value=65 Score=34.33 Aligned_cols=56 Identities=20% Similarity=0.169 Sum_probs=42.2
Q ss_pred CCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHc--CCEEEEecccccc
Q 015609 285 TGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKC--GAVLMCDMAHISG 341 (403)
Q Consensus 285 ~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~--Ga~LivDaAh~~G 341 (403)
...++.+++.+.+.+.+|++|.++.. ++......++++++|+. ++.+++=+.|+.-
T Consensus 47 ~~~~~~~~~~~~l~~~~pdvVgis~~-t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t~ 104 (497)
T TIGR02026 47 TGPLTDEKLVERLRAHCPDLVLITAI-TPAIYIACETLKFARERLPNAIIVLGGIHPTF 104 (497)
T ss_pred ccCCCHHHHHHHHHhcCcCEEEEecC-cccHHHHHHHHHHHHHHCCCCEEEEcCCCcCc
Confidence 34578889988888888999877542 33444566788888887 9999999988753
No 424
>PLN03033 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=37.36 E-value=72 Score=31.85 Aligned_cols=54 Identities=13% Similarity=0.302 Sum_probs=37.0
Q ss_pred CCCCCHHHHHHHhcc----CCCcEEEEe-CCCCC---ccccHHHHHHHHHHcCCEEEEecccc
Q 015609 285 TGYIDYEKLEEKAMD----YRPKILICG-GSSYP---REWDYGRFRQIADKCGAVLMCDMAHI 339 (403)
Q Consensus 285 ~g~ID~d~Le~~i~~----~~pklViv~-~s~~g---~~~Di~~I~~Iake~Ga~LivDaAh~ 339 (403)
+...++++....++. -++++++++ +..++ .+.|+..|..+ ++.+.++++|.+|+
T Consensus 138 Gq~~t~~e~~~aaeki~~~GN~~viLcERG~tFgy~~lv~D~r~ip~m-k~~~lPVI~DpSHs 199 (290)
T PLN03033 138 GQFCAPSVMRNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWM-REANCPVVADITHS 199 (290)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCcCCCCcccchhhhHHH-HhcCCCEEEeCCcc
Confidence 345777776555432 356888885 23433 24788888755 57899999999997
No 425
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=37.21 E-value=29 Score=36.73 Aligned_cols=28 Identities=11% Similarity=0.118 Sum_probs=25.7
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015609 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...|++++++.||++|+.||+|++
T Consensus 75 ~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 75 TKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4688889999999999999999999995
No 426
>PF13378 MR_MLE_C: Enolase C-terminal domain-like; PDB: 3FCP_B 3P0W_D 3VFC_A 3VDG_A 3FJ4_B 3CT2_B 3DGB_A 3V3W_A 3V4B_A 3NO1_E ....
Probab=36.79 E-value=55 Score=26.94 Aligned_cols=51 Identities=10% Similarity=0.002 Sum_probs=40.2
Q ss_pred CCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEecc
Q 015609 287 YIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 287 ~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
..++.+++++++..-..++.+...-.|.+....+|+++|+++|+.+++=..
T Consensus 4 ~~~~~~~~~li~~~a~d~~~~~~~~~GGit~~~~i~~~A~~~gi~~~~h~~ 54 (111)
T PF13378_consen 4 LFSLHDFRRLIEAGAVDIVQIDPTRCGGITEALRIAALAEAHGIPVMPHSM 54 (111)
T ss_dssp SSSHHHHHHHHHTTSCSEEEEBHHHHTSHHHHHHHHHHHHHTT-EEEEBSS
T ss_pred CCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHhCCCEEecCC
Confidence 457788888888655677777766667788899999999999999998774
No 427
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=36.07 E-value=69 Score=31.13 Aligned_cols=25 Identities=16% Similarity=0.100 Sum_probs=19.0
Q ss_pred cHHHHHHHHHHcCCEEEEecccccc
Q 015609 317 DYGRFRQIADKCGAVLMCDMAHISG 341 (403)
Q Consensus 317 Di~~I~~Iake~Ga~LivDaAh~~G 341 (403)
|.+.+.++++++++-+++|++|=.-
T Consensus 53 ~~~~l~~~l~~~~i~~VIDATHPfA 77 (248)
T PRK08057 53 GAEGLAAYLREEGIDLVIDATHPYA 77 (248)
T ss_pred CHHHHHHHHHHCCCCEEEECCCccH
Confidence 6777778888888888888887653
No 428
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=36.04 E-value=1.2e+02 Score=28.64 Aligned_cols=72 Identities=15% Similarity=0.179 Sum_probs=45.5
Q ss_pred CCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCC
Q 015609 288 IDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKS 365 (403)
Q Consensus 288 ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKt 365 (403)
..+++++++++. ...+|.+..+.-.+...+++|.+-+|+.+.++|.|++-.--.+. ...+ ++|++.+|..-+
T Consensus 52 PT~~ev~~l~~a-GadIIAlDaT~R~Rp~~l~~li~~i~~~~~l~MADist~ee~~~----A~~~-G~D~I~TTLsGY 123 (192)
T PF04131_consen 52 PTLKEVDALAEA-GADIIALDATDRPRPETLEELIREIKEKYQLVMADISTLEEAIN----AAEL-GFDIIGTTLSGY 123 (192)
T ss_dssp -SHHHHHHHHHC-T-SEEEEE-SSSS-SS-HHHHHHHHHHCTSEEEEE-SSHHHHHH----HHHT-T-SEEE-TTTTS
T ss_pred CCHHHHHHHHHc-CCCEEEEecCCCCCCcCHHHHHHHHHHhCcEEeeecCCHHHHHH----HHHc-CCCEEEcccccC
Confidence 357888888874 67889898887777788999998888888999999973321110 0111 489999886543
No 429
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=34.93 E-value=89 Score=29.96 Aligned_cols=71 Identities=17% Similarity=0.124 Sum_probs=48.2
Q ss_pred CHHHHHHHhccCCCcEEEEeCCCCCccc-cHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCcCC
Q 015609 289 DYEKLEEKAMDYRPKILICGGSSYPREW-DYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKS 365 (403)
Q Consensus 289 D~d~Le~~i~~~~pklViv~~s~~g~~~-Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StHKt 365 (403)
-+++++++++. ...+|.+..+.-.+.. ++++|.+-.|..|.++|.|++-.-- +..... -++||+-+|.+-+
T Consensus 87 tlkeVd~L~~~-Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~~~l~MAD~St~ee----~l~a~~-~G~D~IGTTLsGY 158 (229)
T COG3010 87 TLKEVDALAEA-GADIIAFDATDRPRPDGDLEELIARIKYPGQLAMADCSTFEE----GLNAHK-LGFDIIGTTLSGY 158 (229)
T ss_pred cHHHHHHHHHC-CCcEEEeecccCCCCcchHHHHHHHhhcCCcEEEeccCCHHH----HHHHHH-cCCcEEecccccc
Confidence 36777777764 5677888877666655 8999998888899999999973211 110000 1489998876643
No 430
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=34.90 E-value=87 Score=29.21 Aligned_cols=49 Identities=4% Similarity=0.090 Sum_probs=31.7
Q ss_pred CCCCHHHHHHHhc----cCCCcEEEEeCCCC---Cc--ccc-------HHHHHHHHHHcCCEEEE
Q 015609 286 GYIDYEKLEEKAM----DYRPKILICGGSSY---PR--EWD-------YGRFRQIADKCGAVLMC 334 (403)
Q Consensus 286 g~ID~d~Le~~i~----~~~pklViv~~s~~---g~--~~D-------i~~I~~Iake~Ga~Liv 334 (403)
..+++++|++.+. ++++++|++..-.. +. ... +..|.++|+++|+.+++
T Consensus 104 ~~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 104 SSLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 4577888876654 34789998874221 11 111 46677899999988777
No 431
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=34.67 E-value=1.3e+02 Score=25.43 Aligned_cols=50 Identities=10% Similarity=-0.025 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEecc
Q 015609 286 GYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 286 g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
..++.++|+.++.. +|.+|+++.-..+...+ +++.+..+++|+-+-+-.+
T Consensus 38 ~~l~~e~l~~l~~~-~peiliiGTG~~~~~~~-~~~~~~l~~~gi~vE~m~T 87 (109)
T cd05560 38 EDLTAAHFEALLAL-QPEVILLGTGERQRFPP-PALLAPLLARGIGVEVMDT 87 (109)
T ss_pred ccCCHHHHHHHHhc-CCCEEEEecCCCCCcCC-HHHHHHHHHcCCeEEEECH
Confidence 36899999988875 68999998766655444 6777788889988877655
No 432
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=33.49 E-value=4.2e+02 Score=27.92 Aligned_cols=109 Identities=17% Similarity=0.125 Sum_probs=60.9
Q ss_pred HHHHHHHHHHcC-CCCCCCcceEEeCChHHHHHHHHhhhccCC-CeEEecCCCCCccccccccCCccchhhhcccceEEe
Q 015609 200 NLCFERALKAFD-LDSDNWGVNVQPYSCTSANFAVYTGLLLPG-DRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESF 277 (403)
Q Consensus 200 ~~arerla~lfg-~~~~~~~v~V~~~SGT~An~aal~all~pG-D~VL~~~~ehgghlsh~~~~~~~~~v~~~g~~~~vv 277 (403)
..|.+.+.+.|+ .... .+.+.+..+....+...|...| .+|++.+-.+ . +...+... +
T Consensus 163 saAv~lA~~~~~~L~~~----~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~----e--------rA~~La~~-~--- 222 (414)
T COG0373 163 SAAVELAKRIFGSLKDK----KVLVIGAGEMGELVAKHLAEKGVKKITIANRTL----E--------RAEELAKK-L--- 222 (414)
T ss_pred HHHHHHHHHHhcccccC----eEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCH----H--------HHHHHHHH-h---
Confidence 345556778888 4553 4555555556666777777776 5566554221 0 11122211 1
Q ss_pred eeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHH-cCCEEEEecc
Q 015609 278 PYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADK-CGAVLMCDMA 337 (403)
Q Consensus 278 ~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake-~Ga~LivDaA 337 (403)
. ...+.++++...+.+ .++|+.+.++.-.+..-..+....+. .. ++++|.|
T Consensus 223 --~----~~~~~l~el~~~l~~--~DvVissTsa~~~ii~~~~ve~a~~~r~~-~livDia 274 (414)
T COG0373 223 --G----AEAVALEELLEALAE--ADVVISSTSAPHPIITREMVERALKIRKR-LLIVDIA 274 (414)
T ss_pred --C----CeeecHHHHHHhhhh--CCEEEEecCCCccccCHHHHHHHHhcccC-eEEEEec
Confidence 1 124667888888764 46777665544344454555444333 23 9999997
No 433
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=32.32 E-value=45 Score=32.39 Aligned_cols=46 Identities=17% Similarity=0.159 Sum_probs=29.7
Q ss_pred CCC-CHHHHHHHhccCCCcEEEEeCCCCCccccH-HHHHHHHHHcCCEEE
Q 015609 286 GYI-DYEKLEEKAMDYRPKILICGGSSYPREWDY-GRFRQIADKCGAVLM 333 (403)
Q Consensus 286 g~I-D~d~Le~~i~~~~pklViv~~s~~g~~~Di-~~I~~Iake~Ga~Li 333 (403)
|.+ |.+.+++.+++++.++|| +. +-|.-..+ +.+.+.|++.|++++
T Consensus 50 G~lg~~~~l~~~l~~~~i~~vI-DA-THPfA~~is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 50 GRLGDEEGLAEFLRENGIDAVI-DA-THPFAAEISQNAIEACRELGIPYL 97 (249)
T ss_pred CCCCCHHHHHHHHHhCCCcEEE-EC-CCchHHHHHHHHHHHHhhcCcceE
Confidence 556 999999999887777654 32 22322222 234578888888765
No 434
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=32.09 E-value=92 Score=30.61 Aligned_cols=26 Identities=15% Similarity=0.068 Sum_probs=20.2
Q ss_pred cccHHHHHHHHHHcCCEEEEeccccc
Q 015609 315 EWDYGRFRQIADKCGAVLMCDMAHIS 340 (403)
Q Consensus 315 ~~Di~~I~~Iake~Ga~LivDaAh~~ 340 (403)
..+.+.+.++.++.++-+++|++|=.
T Consensus 52 ~l~~e~l~~~l~e~~i~llIDATHPy 77 (257)
T COG2099 52 FLGAEGLAAFLREEGIDLLIDATHPY 77 (257)
T ss_pred cCCHHHHHHHHHHcCCCEEEECCChH
Confidence 35678888888888888888888854
No 435
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=31.81 E-value=1.3e+02 Score=26.14 Aligned_cols=58 Identities=12% Similarity=0.078 Sum_probs=38.7
Q ss_pred cceEEeeeecCCCCCCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcC---CEEEE
Q 015609 272 IFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCG---AVLMC 334 (403)
Q Consensus 272 ~~~~vv~~~vd~~~g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~G---a~Liv 334 (403)
.+|+++...+ ...++++-+.+.+.++++|.++........-++++.+..++.| +.+++
T Consensus 29 ~GfeVi~lg~-----~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~viv 89 (132)
T TIGR00640 29 LGFDVDVGPL-----FQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVV 89 (132)
T ss_pred CCcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 3577776543 4678888777777788888776544444445788888777765 45555
No 436
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=31.46 E-value=1.1e+02 Score=30.42 Aligned_cols=65 Identities=14% Similarity=0.216 Sum_probs=43.3
Q ss_pred hccCCCcEEEEeCC------CCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCC------cccEEEEcCcC
Q 015609 297 AMDYRPKILICGGS------SYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD------YCDIVTSTTHK 364 (403)
Q Consensus 297 i~~~~pklViv~~s------~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~------~aDivt~StHK 364 (403)
+..-++.+|+|.-- .+....|+..+..+-+....++|+|-+|+.|--. +..|+. ++|-+....|-
T Consensus 176 ~s~GN~~vILCERGIRtfe~~TRntLDi~aV~~~kq~THLPVivDpSH~~Grr~---lv~pla~AA~AaGAdglmiEVHp 252 (286)
T COG2876 176 LSHGNGNVILCERGIRTFEKATRNTLDISAVPILKQETHLPVIVDPSHATGRRD---LVEPLAKAAIAAGADGLMIEVHP 252 (286)
T ss_pred HhCCCCcEEEEecccccccccccceechHHHHHHHhhcCCCEEECCCCcccchh---hHHHHHHHHHhccCCeeEEEecC
Confidence 33446788887521 2235689999998888889999999999999521 112221 36766666663
No 437
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=31.10 E-value=94 Score=30.92 Aligned_cols=48 Identities=21% Similarity=0.258 Sum_probs=33.3
Q ss_pred CCCHHHHHHHhccCCCcEEEEeCC--CCC-ccc-----------cHHHHHHHHHHcCCEEEE
Q 015609 287 YIDYEKLEEKAMDYRPKILICGGS--SYP-REW-----------DYGRFRQIADKCGAVLMC 334 (403)
Q Consensus 287 ~ID~d~Le~~i~~~~pklViv~~s--~~g-~~~-----------Di~~I~~Iake~Ga~Liv 334 (403)
..|.+.+++.+++.+|++||-... ..- -.. =...|+++|+++|++++-
T Consensus 36 itd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh 97 (281)
T COG1091 36 ITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH 97 (281)
T ss_pred ccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEE
Confidence 467899999999989998875432 111 111 135678999999998753
No 438
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=29.73 E-value=1.2e+02 Score=30.98 Aligned_cols=58 Identities=17% Similarity=0.260 Sum_probs=41.6
Q ss_pred CCC-CCHHHHHHHhcc----CCCcEEEEe--CCCC-C---ccccHHHHHHHHHHcCCEEEEeccccccc
Q 015609 285 TGY-IDYEKLEEKAMD----YRPKILICG--GSSY-P---REWDYGRFRQIADKCGAVLMCDMAHISGL 342 (403)
Q Consensus 285 ~g~-ID~d~Le~~i~~----~~pklViv~--~s~~-g---~~~Di~~I~~Iake~Ga~LivDaAh~~Gl 342 (403)
+|. .+++++..+++. .+++++++. .++| + ...|+..|..+-+..+.++++|.+|+.|.
T Consensus 207 ~G~~~ti~E~l~A~e~i~~~GN~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G~ 275 (335)
T PRK08673 207 RGMSATIEEWLMAAEYILAEGNPNVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATGK 275 (335)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCcc
Confidence 443 477777766543 245777775 3345 2 35789999888888899999999999985
No 439
>PF09872 DUF2099: Uncharacterized protein conserved in archaea (DUF2099); InterPro: IPR009181 The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=29.25 E-value=13 Score=36.23 Aligned_cols=83 Identities=24% Similarity=0.334 Sum_probs=53.6
Q ss_pred cCCCCCCCCH-HHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEE
Q 015609 281 VNPQTGYIDY-EKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVT 359 (403)
Q Consensus 281 vd~~~g~ID~-d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt 359 (403)
+|+++..||. .-++++++.--.++.+.-.. ..|.++|+++=++.+.-+++=++|..|.-... ...-++++|+++
T Consensus 142 Ld~~tA~IDq~~Gv~kAie~Gyk~IaVTV~~----~~~A~~iRele~~~~~~~~if~VHtTGis~ee-A~~l~~~~Divt 216 (258)
T PF09872_consen 142 LDPETARIDQVEGVKKAIEMGYKRIAVTVAD----AEDAKKIRELEKEEGVNIYIFGVHTTGISEEE-AERLFEYADIVT 216 (258)
T ss_pred eCCccccccHHHHHHHHHHcCCceEEEEecC----HHHHHHHHHhhccCCCceEEEEEEccCCCHHH-HHHHHHHhHHHH
Confidence 4566677774 45666665422233332221 24788888887778888888899999963211 112245799999
Q ss_pred EcCcCCCcC
Q 015609 360 STTHKSLRG 368 (403)
Q Consensus 360 ~StHKtL~G 368 (403)
+.+.|+++-
T Consensus 217 ~CASk~iRe 225 (258)
T PF09872_consen 217 SCASKYIRE 225 (258)
T ss_pred HhhhHHHHH
Confidence 999999753
No 440
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=28.85 E-value=1.5e+02 Score=24.89 Aligned_cols=52 Identities=19% Similarity=0.093 Sum_probs=38.2
Q ss_pred CCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEeccc
Q 015609 286 GYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAH 338 (403)
Q Consensus 286 g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaAh 338 (403)
..++.++|+.++...+|.+|+++.-..... .-+++.+..+++|+-+-+-.+.
T Consensus 37 ~~l~~~~l~~~~~~~~peiliiGTG~~~~~-~~~~~~~~l~~~gI~vE~m~T~ 88 (109)
T cd00248 37 SDLDPEALLPLLAEDRPDILLIGTGAEIAF-LPRALRAALRAAGIGVEVMSTG 88 (109)
T ss_pred ccCCHHHHHHHHhhCCCCEEEEcCCCCCCc-CCHHHHHHHHHcCCeEEEeCcH
Confidence 358999999888753489999986666543 3366788888999988775553
No 441
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=28.34 E-value=2.4e+02 Score=20.85 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=30.2
Q ss_pred CCCCHHHHHHHhccCCCcEEEE-eCCCCCccccHHHHHHHHHHcCCEEEE
Q 015609 286 GYIDYEKLEEKAMDYRPKILIC-GGSSYPREWDYGRFRQIADKCGAVLMC 334 (403)
Q Consensus 286 g~ID~d~Le~~i~~~~pklViv-~~s~~g~~~Di~~I~~Iake~Ga~Liv 334 (403)
+.+.++++-+.+++.+-+.+.+ ...+ ...+.++.+.++++|+.++.
T Consensus 13 ~~~~~~~~~~~a~~~g~~~v~iTDh~~---~~~~~~~~~~~~~~gi~~i~ 59 (67)
T smart00481 13 GALSPEELVKRAKELGLKAIAITDHGN---LFGAVEFYKAAKKAGIKPII 59 (67)
T ss_pred ccCCHHHHHHHHHHcCCCEEEEeeCCc---ccCHHHHHHHHHHcCCeEEE
Confidence 5577888888777666665544 4432 23456778888888877653
No 442
>TIGR03586 PseI pseudaminic acid synthase.
Probab=27.99 E-value=1.5e+02 Score=30.19 Aligned_cols=83 Identities=20% Similarity=0.279 Sum_probs=52.8
Q ss_pred CCCCCHHHHHHHhcc----CCCcEEEEe-CCCCCc---cccHHHHHHHHHHcCCEE-EEeccccccccccccccCCCCcc
Q 015609 285 TGYIDYEKLEEKAMD----YRPKILICG-GSSYPR---EWDYGRFRQIADKCGAVL-MCDMAHISGLIAAKELASPFDYC 355 (403)
Q Consensus 285 ~g~ID~d~Le~~i~~----~~pklViv~-~s~~g~---~~Di~~I~~Iake~Ga~L-ivDaAh~~Glia~g~~~~p~~~a 355 (403)
+|.-++++++.++.. ..++++++. .+.|+. ..|+..|..+.++++.++ +.| |..|.... ..... -+|
T Consensus 141 tG~~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~~~~-~aAva-~GA 216 (327)
T TIGR03586 141 TGIATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGILAP-VAAVA-LGA 216 (327)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCchHHH-HHHHH-cCC
Confidence 566678888776642 234676653 567763 568999999999999999 778 99885321 10000 135
Q ss_pred cEE--EEcCcCCCcCCce
Q 015609 356 DIV--TSTTHKSLRGPRG 371 (403)
Q Consensus 356 Div--t~StHKtL~GP~G 371 (403)
+++ -++.-|++.||..
T Consensus 217 ~iIEkH~tld~~l~G~D~ 234 (327)
T TIGR03586 217 CVIEKHFTLDRSDGGVDS 234 (327)
T ss_pred CEEEeCCChhhcCCCCCh
Confidence 654 2466677777754
No 443
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=27.23 E-value=1.3e+02 Score=28.81 Aligned_cols=51 Identities=8% Similarity=-0.105 Sum_probs=42.8
Q ss_pred CCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEec
Q 015609 286 GYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDM 336 (403)
Q Consensus 286 g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDa 336 (403)
...++.++++++.....++|.+..+-.|.+....++.++|+++|+.++.=+
T Consensus 188 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~~~~~A~~~gi~~~~~~ 238 (265)
T cd03315 188 SAFTPHDAFRELALGAADAVNIKTAKTGGLTKAQRVLAVAEALGLPVMVGS 238 (265)
T ss_pred CCCCHHHHHHHHHhCCCCEEEEecccccCHHHHHHHHHHHHHcCCcEEecC
Confidence 467889999888766678888887778888899999999999999988754
No 444
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=27.00 E-value=60 Score=29.11 Aligned_cols=43 Identities=23% Similarity=0.362 Sum_probs=25.7
Q ss_pred CCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcC
Q 015609 287 YIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCG 329 (403)
Q Consensus 287 ~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~G 329 (403)
.-|.+.|.+.+.+++|.+|++++.+.....-++.|.++.++..
T Consensus 49 ~~~~~~l~~~i~~~kP~vI~v~g~~~~s~~l~~~v~~~v~~~~ 91 (150)
T PF14639_consen 49 EEDMERLKKFIEKHKPDVIAVGGNSRESRKLYDDVRDIVEELD 91 (150)
T ss_dssp HHHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHHHHHHHhh
Confidence 3567788889999999999886544333333555666666543
No 445
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=24.26 E-value=2e+02 Score=22.97 Aligned_cols=51 Identities=8% Similarity=0.072 Sum_probs=34.1
Q ss_pred HHHHHHHhccCCCcEEEEeCCCCCccccHHH-HHHHHHHcCCEEEEecc-ccccc
Q 015609 290 YEKLEEKAMDYRPKILICGGSSYPREWDYGR-FRQIADKCGAVLMCDMA-HISGL 342 (403)
Q Consensus 290 ~d~Le~~i~~~~pklViv~~s~~g~~~Di~~-I~~Iake~Ga~LivDaA-h~~Gl 342 (403)
+.++.+.++..+.++|++.....+ ..+.. |..+|++++++++.=.+ .-+|.
T Consensus 20 ~~~v~k~l~~~~~~lvilA~d~~~--~~~~~~l~~~c~~~~Ip~~~~~s~~eLG~ 72 (95)
T PF01248_consen 20 IKEVLKALKKGKAKLVILAEDCSP--DSIKKHLPALCEEKNIPYVFVPSKEELGR 72 (95)
T ss_dssp HHHHHHHHHTTCESEEEEETTSSS--GHHHHHHHHHHHHTTEEEEEESHHHHHHH
T ss_pred hHHHHHHHHcCCCcEEEEcCCCCh--hhhcccchhheeccceeEEEECCHHHHHH
Confidence 466777777667788887643333 34555 88899999999766554 44443
No 446
>PLN00196 alpha-amylase; Provisional
Probab=23.08 E-value=69 Score=33.67 Aligned_cols=28 Identities=18% Similarity=0.245 Sum_probs=25.4
Q ss_pred CCCCccccHHHHHHHHHHcCCEEEEecc
Q 015609 310 SSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 310 s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+.+|...+++++.+-||+.|+.+|+|.+
T Consensus 86 ~~fGt~~elk~Lv~~aH~~GIkVilDvV 113 (428)
T PLN00196 86 SKYGNEAQLKSLIEAFHGKGVQVIADIV 113 (428)
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4678888999999999999999999985
No 447
>PRK10785 maltodextrin glucosidase; Provisional
Probab=22.70 E-value=69 Score=35.06 Aligned_cols=27 Identities=19% Similarity=0.174 Sum_probs=24.1
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEecc
Q 015609 311 SYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
.+|...|++++++-||+.|+.||+|.+
T Consensus 221 ~~Gt~~df~~Lv~~aH~rGikVilD~V 247 (598)
T PRK10785 221 QLGGDAALLRLRHATQQRGMRLVLDGV 247 (598)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 566778999999999999999999996
No 448
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=22.62 E-value=1.7e+02 Score=28.90 Aligned_cols=51 Identities=10% Similarity=-0.118 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEec
Q 015609 286 GYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDM 336 (403)
Q Consensus 286 g~ID~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDa 336 (403)
...++++++++++....++|....+..|.+....+++++|+++|+.++.=+
T Consensus 236 ~~~~~~~~~~~~~~~~~d~v~~~~~~~GGi~~~~~~~~~a~~~gi~~~~~~ 286 (316)
T cd03319 236 SCFSAADAARLAGGGAYDGINIKLMKTGGLTEALRIADLARAAGLKVMVGC 286 (316)
T ss_pred CCCCHHHHHHHHhcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 456788888888765567888877777888889999999999999888753
No 449
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=22.61 E-value=89 Score=34.60 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=28.2
Q ss_pred EEeCCCCCccccHHHHHHHHHHcCCEEEEecc
Q 015609 306 ICGGSSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 306 iv~~s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
..-.+.||..-|++++.+-||+.|+-||+|-+
T Consensus 204 yAp~sryGtPedfk~fVD~aH~~GIgViLD~V 235 (628)
T COG0296 204 YAPTSRYGTPEDFKALVDAAHQAGIGVILDWV 235 (628)
T ss_pred ccccccCCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 33456799999999999999999999999985
No 450
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=21.94 E-value=1.3e+02 Score=25.84 Aligned_cols=40 Identities=18% Similarity=0.125 Sum_probs=20.6
Q ss_pred HHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEec
Q 015609 292 KLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDM 336 (403)
Q Consensus 292 ~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDa 336 (403)
.+++++.. ++-+||+.... .+.+.|.++|++++++++.=.
T Consensus 73 ~l~~l~~~-~~P~iIvt~~~----~~p~~l~e~a~~~~ipll~t~ 112 (127)
T PF02603_consen 73 RLEKLFSY-NPPCIIVTRGL----EPPPELIELAEKYNIPLLRTP 112 (127)
T ss_dssp HHHHHCTT-T-S-EEEETTT-------HHHHHHHHHCT--EEEES
T ss_pred HHHHHhCC-CCCEEEEECcC----CCCHHHHHHHHHhCCcEEEcC
Confidence 44445543 44444443221 456889999999999987643
No 451
>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria. In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.
Probab=21.51 E-value=1.4e+02 Score=24.89 Aligned_cols=43 Identities=12% Similarity=0.006 Sum_probs=29.2
Q ss_pred cccHHHHHHHHHHcCCEEEEeccccccccccccccCCCCcccEEEEcCc
Q 015609 315 EWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTH 363 (403)
Q Consensus 315 ~~Di~~I~~Iake~Ga~LivDaAh~~Glia~g~~~~p~~~aDivt~StH 363 (403)
-.=.+++.+.|++.|+.+-+.+.-.. ..+...+.+|++..+.|
T Consensus 14 s~la~km~~~a~~~gi~~~i~a~~~~------e~~~~~~~~Dvill~PQ 56 (99)
T cd05565 14 GLLANALNKGAKERGVPLEAAAGAYG------SHYDMIPDYDLVILAPQ 56 (99)
T ss_pred HHHHHHHHHHHHHCCCcEEEEEeeHH------HHHHhccCCCEEEEcCh
Confidence 34578999999999998777764211 12223445899988776
No 452
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=21.36 E-value=2.2e+02 Score=22.89 Aligned_cols=45 Identities=2% Similarity=-0.024 Sum_probs=30.9
Q ss_pred HHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEecc
Q 015609 291 EKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 291 d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
+++.+.++..+.++|++... .+ ..=.+.|...|+.++++++...+
T Consensus 14 ~~vlkaIk~gkakLViiA~D-a~-~~~~k~i~~~c~~~~Vpv~~~~t 58 (82)
T PRK13601 14 KQTLKAITNCNVLQVYIAKD-AE-EHVTKKIKELCEEKSIKIVYIDT 58 (82)
T ss_pred HHHHHHHHcCCeeEEEEeCC-CC-HHHHHHHHHHHHhCCCCEEEeCC
Confidence 55666777667888887542 22 22357888999999999865543
No 453
>PRK12313 glycogen branching enzyme; Provisional
Probab=21.18 E-value=81 Score=34.73 Aligned_cols=27 Identities=15% Similarity=0.170 Sum_probs=23.9
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEecc
Q 015609 311 SYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
.||...|++++.+.||+.|+.||.|.+
T Consensus 215 ~~Gt~~d~k~lv~~~H~~Gi~VilD~V 241 (633)
T PRK12313 215 RYGTPEDFMYLVDALHQNGIGVILDWV 241 (633)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 567778999999999999999999975
No 454
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=20.81 E-value=2.1e+02 Score=22.87 Aligned_cols=45 Identities=9% Similarity=-0.011 Sum_probs=30.8
Q ss_pred HHHHHHHhccCCCcEEEEeCCCCCccccHHHHHHHHHHcCCEEEEec
Q 015609 290 YEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDM 336 (403)
Q Consensus 290 ~d~Le~~i~~~~pklViv~~s~~g~~~Di~~I~~Iake~Ga~LivDa 336 (403)
.+++.+.++..+.++|++....-. .=.+.|..+|++++++++.=.
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~--~~~~~i~~~c~~~~Vp~~~~~ 60 (82)
T PRK13602 16 TKQTVKALKRGSVKEVVVAEDADP--RLTEKVEALANEKGVPVSKVD 60 (82)
T ss_pred HHHHHHHHHcCCeeEEEEECCCCH--HHHHHHHHHHHHcCCCEEEEC
Confidence 466777777777888887643222 235678889999998875533
No 455
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=20.78 E-value=83 Score=34.12 Aligned_cols=27 Identities=22% Similarity=0.313 Sum_probs=24.1
Q ss_pred CCCccccHHHHHHHHHHcCCEEEEecc
Q 015609 311 SYPREWDYGRFRQIADKCGAVLMCDMA 337 (403)
Q Consensus 311 ~~g~~~Di~~I~~Iake~Ga~LivDaA 337 (403)
.+|...|++++++.||++|+.||+|.+
T Consensus 76 ~~Gt~~d~~~lv~~~h~~gi~vilD~V 102 (551)
T PRK10933 76 TYGTLDDFDELVAQAKSRGIRIILDMV 102 (551)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 566778999999999999999999985
No 456
>TIGR01306 GMP_reduct_2 guanosine monophosphate reductase, bacterial. A deep split separates two families of GMP reductase. The other (TIGR01305) is found in eukaryotic and some proteobacterial lineages, including E. coli, while this family is found in a variety of bacterial lineages.
Probab=20.25 E-value=1.6e+02 Score=29.88 Aligned_cols=6 Identities=17% Similarity=0.196 Sum_probs=3.0
Q ss_pred ccEEEE
Q 015609 355 CDIVTS 360 (403)
Q Consensus 355 aDivt~ 360 (403)
+|.+..
T Consensus 159 ad~I~V 164 (321)
T TIGR01306 159 ADATKV 164 (321)
T ss_pred cCEEEE
Confidence 555543
Done!