Query 015611
Match_columns 403
No_of_seqs 171 out of 1354
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 07:55:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015611.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015611hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02180 gamma-glutamyl transp 100.0 1.7E-96 4E-101 783.5 38.1 398 1-401 1-412 (639)
2 COG0405 Ggt Gamma-glutamyltran 100.0 2.5E-93 5.3E-98 742.2 36.0 330 68-400 12-349 (539)
3 PLN02198 glutathione gamma-glu 100.0 5.6E-93 1.2E-97 752.7 38.3 335 64-399 25-359 (573)
4 PRK09615 ggt gamma-glutamyltra 100.0 9.1E-90 2E-94 728.7 37.9 334 63-399 40-381 (581)
5 KOG2410 Gamma-glutamyltransfer 100.0 6.7E-91 1.4E-95 720.9 28.6 337 65-402 43-383 (579)
6 TIGR00066 g_glut_trans gamma-g 100.0 6.6E-89 1.4E-93 715.6 35.8 323 73-397 1-332 (516)
7 PF01019 G_glu_transpept: Gamm 100.0 1.8E-82 4E-87 666.6 27.4 312 87-399 1-317 (510)
8 cd04513 Glycosylasparaginase G 79.1 4.3 9.3E-05 40.0 5.8 40 80-120 9-50 (263)
9 PLN02689 Bifunctional isoaspar 76.5 4.2 9E-05 41.2 5.0 40 80-119 32-71 (318)
10 cd04702 ASRGL1_like ASRGL1_lik 73.2 6 0.00013 39.0 5.1 40 80-119 26-65 (261)
11 PRK10226 isoaspartyl peptidase 72.2 6 0.00013 40.0 4.9 39 80-119 33-72 (313)
12 PF01112 Asparaginase_2: Aspar 65.9 10 0.00022 38.4 5.1 41 80-120 31-71 (319)
13 cd04701 Asparaginase_2 L-Aspar 65.6 11 0.00023 37.2 5.0 40 80-119 29-68 (260)
14 PLN02937 Putative isoaspartyl 63.6 11 0.00024 39.6 5.0 41 80-120 36-77 (414)
15 cd04514 Taspase1_like Taspase1 62.7 13 0.00028 37.5 5.1 41 80-120 25-65 (303)
16 cd04512 Ntn_Asparaginase_2_lik 55.1 21 0.00046 35.0 5.0 39 81-119 24-62 (248)
17 PF04157 EAP30: EAP30/Vps36 fa 33.2 14 0.0003 35.2 -0.1 66 260-326 90-183 (223)
18 COG1446 Asparaginase [Amino ac 32.4 54 0.0012 33.1 3.9 27 81-107 29-55 (307)
19 KOG3341 RNA polymerase II tran 26.8 46 0.001 32.1 2.2 66 212-288 50-124 (249)
20 PF00465 Fe-ADH: Iron-containi 24.5 1.2E+02 0.0025 30.8 4.9 85 93-182 87-195 (366)
21 cd08180 PDD 1,3-propanediol de 24.2 1.2E+02 0.0025 30.5 4.7 84 93-181 87-182 (332)
22 COG3855 Fbp Uncharacterized pr 24.1 3.2E+02 0.0068 29.6 7.8 71 244-331 180-254 (648)
23 COG0376 KatG Catalase (peroxid 23.5 44 0.00096 36.3 1.6 84 114-204 88-177 (730)
24 PF05015 Plasmid_killer: Plasm 22.3 1.2E+02 0.0026 24.8 3.6 55 249-303 9-63 (93)
25 cd08192 Fe-ADH7 Iron-containin 22.2 1.9E+02 0.0042 29.3 6.0 84 93-181 90-200 (370)
26 PF15505 DUF4648: Domain of un 21.6 66 0.0014 29.3 2.1 26 156-181 131-156 (170)
27 cd08551 Fe-ADH iron-containing 21.0 1.8E+02 0.0038 29.5 5.4 85 93-182 89-196 (370)
28 PF12836 HHH_3: Helix-hairpin- 20.3 97 0.0021 23.5 2.5 28 263-290 23-50 (65)
No 1
>PLN02180 gamma-glutamyl transpeptidase 4
Probab=100.00 E-value=1.7e-96 Score=783.47 Aligned_cols=398 Identities=60% Similarity=0.991 Sum_probs=356.2
Q ss_pred CccccccccccCCCCccccccCCchhH-----HHHHHHHHHHHHHHHHHHhhcccc--------ccccCcccccccCCcc
Q 015611 1 MRQQSAEAPLLSSNHINIHVSSAPKHR-----ALRLLLVFFAISSILGLVFKDKCL--------IFFNGKLKLKVNYGDV 67 (403)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 67 (403)
|++.++.+|||..++++ |.++||+. .+.++|++..++-++.++|-.+.. +...++-.+ +.-...
T Consensus 1 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 77 (639)
T PLN02180 1 MGDAIIADPLLAIDHET--VAEKKKKKQSKNLKIALFLLLIILAASGGFSFNDKITTVFLSRQAIDDDHSLSH-GTISDM 77 (639)
T ss_pred CCcchhcCchhhcchHH--HHHHhhhhcccchHHHHHHHHHHHHHhcceEeecccceEEEeecccCCCccccc-cceeee
Confidence 78999999999999999 66554433 555666666666677777766552 112222211 112335
Q ss_pred ccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceeEEeecCCCcEEEEEeecCcccCCC
Q 015611 68 VESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAPQAAS 147 (403)
Q Consensus 68 ~~~~~gaVas~~~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGgg~~lv~~~~~~~~~~id~r~~aP~~a~ 147 (403)
+.+.+|||||+||+||++|.+||++||||||||||++||++||+|++||||||+||+||+++++++++|||||+||..++
T Consensus 78 ~~~~~GaVAs~~plAs~aG~~IL~~GGNAVDAAVAaa~aL~VveP~~sGiGGggf~lv~~~~~~~~~~id~re~AP~~a~ 157 (639)
T PLN02180 78 VESENGVVAADDARCSEIGASVLRRGGHAVDAAVAITLCIGVVNPMSSGIGGGSFLIVSSQKDSKAEAFDMRETAPLAAS 157 (639)
T ss_pred EEecceEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhccCCCCCCeEEEEEECCCCcEEEEeCcccccccCC
Confidence 57889999999999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred hhhhccCccccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHhcCccchhc
Q 015611 148 QDMYENDTEAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVILNDRGLRQV 227 (403)
Q Consensus 148 ~~~~~~~~~~~~~G~~sv~VPG~l~Gl~~a~~~~G~L~w~~ll~PAI~LA~~Gf~V~~~la~~l~~~~~~i~~~~~~~~~ 227 (403)
++||..+...+.+|++||+|||+++||+++|+|||+|||++||+|||+|||+||+|++.++..++...+.+.++|+++++
T Consensus 158 ~d~~~~~~~~~~~G~~svaVPG~v~Gl~~ah~ryGkLpwa~Ll~PAI~lAr~GfpVs~~la~~l~~~~~~l~~~p~~~~~ 237 (639)
T PLN02180 158 KDMYKNDASAKSLGALSMGVPGEIAGLYEAWKRYGRLPWKPLFEPAIELARDGFVVHPYLGKAISSHAAMILKDPGLRSV 237 (639)
T ss_pred HHHHhcCCCCCCCCcccccccchHHHHHHHHHHHCCCCHHHHHHHHHHHHhcCcccCHHHHHHHHHHHHHHhcChhHHHH
Confidence 99997655567889999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cccCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceeecCEEEeeCCeEEE
Q 015611 228 FAPNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMSANAMGYTIS 307 (403)
Q Consensus 228 f~~~G~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~~~~g~~v~ 307 (403)
|.++|+++++||+++||+||+||++||++|+++||+|++|++|+++++++||.||.+||++|+++|++||+++|+||+||
T Consensus 238 f~~~G~~~~~Gd~l~qp~LA~TLe~IA~~G~d~FY~G~iA~~iv~~~~~~GG~lT~eDLa~Y~~~~~~Pl~~~y~G~~V~ 317 (639)
T PLN02180 238 FSRNGQVLKPGETCYNPELAQSLETISEQGPGAFYNGTIGEKLVKDVKKAGGIITMDDLRSYEVLVTDAMSVDVMGYTIH 317 (639)
T ss_pred hCcCCccCCCCCeeccHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHcCCCCCHHHHHhCCceEeCCeEEEecCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCChHHHHHHHHHHHhcCCCCCC-CCchhHHHHHHHHHHHHHHhHhhCCCCCCCCCchhHhhhCCHHHHHHHHhhC
Q 015611 308 GMPPPSSGTVGMSMILNIFDSYGSSDS-AKGNLGLHRLIEALKHMFAVRMTLGDPKFVNNTNTLSEMLSPSYAEQIQLKI 386 (403)
Q Consensus 308 ~~ppPssG~~~L~~~Lnile~~~~~~~-~~~~~~~h~lvEa~k~a~a~R~~lGDp~f~~v~~~~~~lls~~~a~~~r~~I 386 (403)
++||||||+++|.++|||||+|+.... ..+++++|+++||+|+||++|.++|||+|+++++.+++|||++|+++++++|
T Consensus 318 ~~PPPSsGg~~L~~~L~iLe~~~~~~~~~~~~~~~h~liEA~k~A~a~R~~lgDP~f~~v~~~~~~lls~~ya~~~~~~I 397 (639)
T PLN02180 318 GMPPPSGGTLGFSMVIDILDSYSNLYTASGRELGLHRLIEAMKHMFAARMDLGDPEFVNITNAMNQMLSKAHAEEIQKRI 397 (639)
T ss_pred EcCCCchHHHHHHHHHHHHhcCCccccCCCcHHHHHHHHHHHHHHHHHHHhcCChhhccccccHhhhhCHHHHHHHHhhC
Confidence 999999999988899999999986543 3567899999999999999999999999999876689999999999999999
Q ss_pred CCCCCCCCCCCCCCC
Q 015611 387 FDNTTFPPDYYMYRY 401 (403)
Q Consensus 387 ~~~~t~~~~~Y~~~~ 401 (403)
++++++++.+|++.|
T Consensus 398 ~~~~~~~~~~~~~~~ 412 (639)
T PLN02180 398 FDNTTFPPEYYLNRW 412 (639)
T ss_pred CccccCCccccccCc
Confidence 999988877776544
No 2
>COG0405 Ggt Gamma-glutamyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-93 Score=742.24 Aligned_cols=330 Identities=43% Similarity=0.710 Sum_probs=315.3
Q ss_pred ccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceeEEeecCCC-cEEEEEeecCcccCC
Q 015611 68 VESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATS-QTLAFDMRETAPQAA 146 (403)
Q Consensus 68 ~~~~~gaVas~~~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGgg~~lv~~~~~~-~~~~id~r~~aP~~a 146 (403)
+.+.+|||+|+||+||++|.+||++||||||||||+++||+||+|++||||||+|||||+ +++ +++.|||||+||.++
T Consensus 12 ~~~~~g~Vas~~~lAs~aG~~iL~~GGNA~DAAVA~~~~L~VveP~ssGiGGggF~l~~~-~~~~~~~~ld~re~AP~~a 90 (539)
T COG0405 12 VRGTRGMVASSHPLASQAGLDILKKGGNAVDAAVAVAAALAVVEPQSSGIGGGGFMLIRD-KTGGKVTALDGRETAPAAA 90 (539)
T ss_pred eeccceEEEeCcHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhccccCCCCCCeEEEEEe-CCCCceEEEeccccCcccC
Confidence 789999999999999999999999999999999999999999999999999999999998 555 889999999999999
Q ss_pred Chhhhcc-Cc----cccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHhcC
Q 015611 147 SQDMYEN-DT----EAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVILND 221 (403)
Q Consensus 147 ~~~~~~~-~~----~~~~~G~~sv~VPG~l~Gl~~a~~~~G~L~w~~ll~PAI~LA~~Gf~V~~~la~~l~~~~~~i~~~ 221 (403)
+.+||.+ +. ..+..|+++|+|||+++||+++|+|||+|||++||+|||+|||+||+|++.++..+....+.+.++
T Consensus 91 t~~~~~~~~g~~~~~~~~~G~~av~VPG~v~gl~~~~~~yG~l~~~~ll~PAi~lA~~Gf~v~~~~~~~~~~~~~~l~~~ 170 (539)
T COG0405 91 TKEMYLDKDGQVDPELPVRGGLAVGVPGTVAGLEEAHKRYGTLPWADLLEPAIKLARDGFPVSPRLAALIASAAERLAKD 170 (539)
T ss_pred ChhheeccCCcccccccccCCcccccCchHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCccCHHHHHHHhhhhHHHhhC
Confidence 9996654 33 578899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceeecCEEEee
Q 015611 222 RGLRQVFAPNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMSANA 301 (403)
Q Consensus 222 ~~~~~~f~~~G~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~~~ 301 (403)
|+++++|.++|+++++||+++||+||+||+.||++|+++||+|+||++|++.++++||+||.+||++|+++|++||+.+|
T Consensus 171 ~~~~~~fl~~G~~~~~Gd~~~qp~lA~TL~~Ia~~G~~~FY~G~iA~~iv~~~~~~gG~lt~eDla~Y~~~~~~Pl~~~Y 250 (539)
T COG0405 171 PETAAIFLPPGKPLKAGDLLKQPDLAKTLEEIAEKGPDAFYKGEIADAIVKAVQKAGGLLTLEDLAGYRVEIREPLSGDY 250 (539)
T ss_pred hhhhhhhcCCCCCCCCCchhcCHHHHHHHHHHHHhCcccccCcHHHHHHHHHHHHcCCcccHHHHhhCCceEecceEEec
Confidence 99999998889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCChHHHHHHHHHHHhcCCCCCC-CCchhHHHHHHHHHHHHHHhHh-hCCCCCCCCCchhHhhhCCHHHH
Q 015611 302 MGYTISGMPPPSSGTVGMSMILNIFDSYGSSDS-AKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEMLSPSYA 379 (403)
Q Consensus 302 ~g~~v~~~ppPssG~~~L~~~Lnile~~~~~~~-~~~~~~~h~lvEa~k~a~a~R~-~lGDp~f~~v~~~~~~lls~~~a 379 (403)
+||+||++|||||||++++++|||||+|++++. .++++++|.++||+|+||+||. ++|||+|+++| +++|||++|+
T Consensus 251 rg~~v~~~ppPsSgGi~~l~~L~ile~~dl~~~~~~s~~~vhl~~Eamk~AyadR~~ylgDpdfv~vp--v~~Lls~~Y~ 328 (539)
T COG0405 251 RGYDVYEMPPPSSGGIAVLQILNILENFDLSSLGPGSAERVHLLIEAMKLAYADRDRYLGDPDFVPVP--VEGLLSKEYA 328 (539)
T ss_pred cCceEEeCCCCCcHHHHHHHHHHhhhcCCcccCCCCcHHHHHHHHHHHHHHHHhHHhhcCCcccccCc--HHHhcCHHHH
Confidence 999999999999999999999999999999873 5689999999999999999995 89999999998 8999999999
Q ss_pred HHHHhhCCCCCCCCCCCCCCC
Q 015611 380 EQIQLKIFDNTTFPPDYYMYR 400 (403)
Q Consensus 380 ~~~r~~I~~~~t~~~~~Y~~~ 400 (403)
++++++|++.++.++..|.+.
T Consensus 329 ~~r~~~I~~~~a~~~~~~~p~ 349 (539)
T COG0405 329 KERAALIGPEKALPPKKVKPG 349 (539)
T ss_pred HHHHHhcCccccCCcccCCCC
Confidence 999999999899888888775
No 3
>PLN02198 glutathione gamma-glutamylcysteinyltransferase
Probab=100.00 E-value=5.6e-93 Score=752.65 Aligned_cols=335 Identities=52% Similarity=0.912 Sum_probs=318.4
Q ss_pred CCccccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceeEEeecCCCcEEEEEeecCcc
Q 015611 64 YGDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAP 143 (403)
Q Consensus 64 ~~~~~~~~~gaVas~~~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGgg~~lv~~~~~~~~~~id~r~~aP 143 (403)
+++.+.+.+|||+|+||+||++|++||++||||||||||++||++||+|++||||||+||+||+ +++++++|||||+||
T Consensus 25 ~~~~~~~~~gaVas~~p~as~aG~~iL~~GGNAvDAAVAa~~~l~VveP~~sGiGGggf~lv~~-~~~~~~~id~~~~AP 103 (573)
T PLN02198 25 RQQSIVASHGAVATDDGRCSVIGMNVLREGGNAIDASVAAALCLGVVSPASSGIGGGAFTLIKL-ANGEEIAYDSRETAP 103 (573)
T ss_pred CCCceeccceEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhccccCCCCCceEEEEEE-CCCcEEEEeCccccc
Confidence 4455678899999999999999999999999999999999999999999999999999999996 567889999999999
Q ss_pred cCCChhhhccCccccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHhcCcc
Q 015611 144 QAASQDMYENDTEAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVILNDRG 223 (403)
Q Consensus 144 ~~a~~~~~~~~~~~~~~G~~sv~VPG~l~Gl~~a~~~~G~L~w~~ll~PAI~LA~~Gf~V~~~la~~l~~~~~~i~~~~~ 223 (403)
..++++||.++...+..|+++|+|||+++||+++|+|||||||++||+|||+|||+||+|++.++..++..++.|.++|+
T Consensus 104 ~~a~~d~~~~~~~~~~~G~~sv~VPG~v~Gl~~~~~~~G~L~w~~ll~PAI~lAr~Gf~v~~~la~~l~~~~~~l~~~p~ 183 (573)
T PLN02198 104 LSATENMYGGNVELKKKGALSVGVPGEVAGLFTAWKQHGKLPWKRLVRPAEKLAAEGFKISKYLYMQMNATRSDILADKG 183 (573)
T ss_pred ccCCHhHhcCCCcCCCCCccccccchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHhcChh
Confidence 99999999766556788999999999999999999999999999999999999999999999999999999899999999
Q ss_pred chhccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceeecCEEEeeCC
Q 015611 224 LRQVFAPNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMSANAMG 303 (403)
Q Consensus 224 ~~~~f~~~G~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~~~~g 303 (403)
++++|.++|+++++||+++||+||+||++||++|+++||+|+||++|+++++++||.||.+||++|++++++|++++|+|
T Consensus 184 ~~~~f~~~G~~~~~Gd~l~~p~LA~TL~~iA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~y~~~~~~Pl~~~~~g 263 (573)
T PLN02198 184 LSDLFVSNGELKKPGTICHNPKLALTLRLIGEYGPKAFYNGTVGVNLVRDIQKSGGIITLKDLQSYRVKVKEPLSADILG 263 (573)
T ss_pred HHHHcCcCCCcCCCCCeecCHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHcCCCCCHHHHhhCCceeeCCeEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCCCChHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHhHhhCCCCCCCCCchhHhhhCCHHHHHHHH
Q 015611 304 YTISGMPPPSSGTVGMSMILNIFDSYGSSDSAKGNLGLHRLIEALKHMFAVRMTLGDPKFVNNTNTLSEMLSPSYAEQIQ 383 (403)
Q Consensus 304 ~~v~~~ppPssG~~~L~~~Lnile~~~~~~~~~~~~~~h~lvEa~k~a~a~R~~lGDp~f~~v~~~~~~lls~~~a~~~r 383 (403)
|+||++||||||+++++++|||||+|++.....+++++|+++||+|+||++|.++|||+|+++++.+++|||++|+++++
T Consensus 264 ~~v~~~ppPs~Gg~~l~~~L~iLe~~~l~~~~~~~~~~h~l~Ea~k~A~~~R~~lgDP~f~~v~~~~~~lls~~ya~~~~ 343 (573)
T PLN02198 264 YRVLGMPPPSSGGAAMMLILNILAQYGIPSGVSGPLGVHRLIEALKHAFAVRMNLGDPDFVDVTKVVSDMLSPKFAQDLK 343 (573)
T ss_pred eEEEECCCCchHHHHHHHHHHHhhhcCcccCCCcHHHHHHHHHHHHHHHHHHHhcCCccccccchhHHhhcCHHHHHHHH
Confidence 99999999999999888999999999987655678899999999999999999999999999876789999999999999
Q ss_pred hhCCCCCCCCCCCCCC
Q 015611 384 LKIFDNTTFPPDYYMY 399 (403)
Q Consensus 384 ~~I~~~~t~~~~~Y~~ 399 (403)
++|++++++++.+|++
T Consensus 344 ~~I~~~~~~~~~~~~~ 359 (573)
T PLN02198 344 SKINDNKTFDPKHYGG 359 (573)
T ss_pred hhCCccccCCccccCC
Confidence 9999998888888865
No 4
>PRK09615 ggt gamma-glutamyltranspeptidase; Reviewed
Probab=100.00 E-value=9.1e-90 Score=728.74 Aligned_cols=334 Identities=36% Similarity=0.594 Sum_probs=310.5
Q ss_pred cCCccccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceeEEeecCCCcEEEEEeecCc
Q 015611 63 NYGDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETA 142 (403)
Q Consensus 63 ~~~~~~~~~~gaVas~~~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGgg~~lv~~~~~~~~~~id~r~~a 142 (403)
..++.+.+.+|||+|+||+||++|.+||++||||||||||+++|++||+||+||||||+||+||+ +++++++|||||+|
T Consensus 40 ~~~~~~~~~~g~Vas~~plAs~aG~~VL~~GGNAvDAAVAaa~~l~VveP~~sGiGGggf~lv~~-~~~~~~~id~~~~A 118 (581)
T PRK09615 40 DVFHPVRAKQGMVASVDATATQVGVDILKQGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLLRT-KNGNTTAIDFREMA 118 (581)
T ss_pred cccCceecCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCcccCEEEEEEE-CCCcEEEEEccccC
Confidence 34445678999999999999999999999999999999999999999999999999999999997 45778999999999
Q ss_pred ccCCChhhhccC--c---cccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHH-HH
Q 015611 143 PQAASQDMYEND--T---EAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANK-AE 216 (403)
Q Consensus 143 P~~a~~~~~~~~--~---~~~~~G~~sv~VPG~l~Gl~~a~~~~G~L~w~~ll~PAI~LA~~Gf~V~~~la~~l~~~-~~ 216 (403)
|..++++||..+ . ..+..|++||+|||+++||+++|+|||+|||++||+|||+|||+||+|++.++..++.. .+
T Consensus 119 P~~a~~d~~~~~~g~~~p~~~~~G~~svaVPG~v~Gl~~~~~r~G~L~w~~ll~PAI~lA~~Gf~v~~~la~~l~~~~~~ 198 (581)
T PRK09615 119 PAKATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSE 198 (581)
T ss_pred cccCCHhhhhcccCCcCCcccccCCceeecCchHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCccCCHHHHHHHHHhHHH
Confidence 999999999532 1 12345999999999999999999999999999999999999999999999999999887 66
Q ss_pred HHhcCccchhccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceeecC
Q 015611 217 VILNDRGLRQVFAPNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDA 296 (403)
Q Consensus 217 ~i~~~~~~~~~f~~~G~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~p 296 (403)
.|.++|+++++|.++|+++++||+++||+||+||++||++|+++||+|+||++|+++++++||.||.+||++|++++++|
T Consensus 199 ~l~~~~~~~~~f~~~G~~~~~G~~l~~p~LA~TL~~iA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~P 278 (581)
T PRK09615 199 VLPNHENSKAIFWKEGEPLKKGDKLVQANLAKSLEMIAENGPDAFYKGTIADQIAQEMQKNGGLITKEDLAAYKAVERTP 278 (581)
T ss_pred HhhcChhHHHHhccCCCcCCCCCEeeCHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHcCCCCCHHHHhhCCceeECC
Confidence 78888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCeEEEecCCCCChHHHHHHHHHHHhcCCCCCC-CCchhHHHHHHHHHHHHHHhHh-hCCCCCCCCCchhHhhhC
Q 015611 297 MSANAMGYTISGMPPPSSGTVGMSMILNIFDSYGSSDS-AKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEML 374 (403)
Q Consensus 297 l~~~~~g~~v~~~ppPssG~~~L~~~Lnile~~~~~~~-~~~~~~~h~lvEa~k~a~a~R~-~lGDp~f~~v~~~~~~ll 374 (403)
|+++|+||+||++||||||+++|+++|||||+|+++.. ..+++++|+++||+|+||++|. ++|||+|++++ +++||
T Consensus 279 l~~~y~g~~v~~~pPPs~Gg~~l~~~L~iLe~~~l~~~~~~s~~~~h~l~EA~k~A~adR~~~lgDP~f~~~~--~~~ll 356 (581)
T PRK09615 279 ISGDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDPDFVKVP--WQALT 356 (581)
T ss_pred eEEEecCcEEEeCCCCchHHHHHHHHHHHhhcCCcccCCCCCHHHHHHHHHHHHHHHHHHHHhCCChhhcccC--hhhcc
Confidence 99999999999999999999988899999999998753 5678999999999999999997 69999999886 88999
Q ss_pred CHHHHHHHHhhCCCCCCCCCCCCCC
Q 015611 375 SPSYAEQIQLKIFDNTTFPPDYYMY 399 (403)
Q Consensus 375 s~~~a~~~r~~I~~~~t~~~~~Y~~ 399 (403)
|++|+++++++|+++++++..+|.+
T Consensus 357 s~~ya~~~~~~I~~~~~~~~~~~~~ 381 (581)
T PRK09615 357 NKAYAKSIADQIDINKAKPSSEIRP 381 (581)
T ss_pred CHHHHHHHHhhcCccccCcccccCC
Confidence 9999999999999998887666654
No 5
>KOG2410 consensus Gamma-glutamyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-91 Score=720.90 Aligned_cols=337 Identities=52% Similarity=0.835 Sum_probs=322.4
Q ss_pred CccccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceeEEeecCCCcEEEEEeecCccc
Q 015611 65 GDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAPQ 144 (403)
Q Consensus 65 ~~~~~~~~gaVas~~~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGgg~~lv~~~~~~~~~~id~r~~aP~ 144 (403)
+....+.||||+||++.||+||++||++||||||||||++||+|||+||++|||||+||+||++.+++.++||+||+||+
T Consensus 43 ~~~~~~~~gAVasd~~~CS~IG~~iL~~GGnAVDAAIAa~lC~Gvvnp~SsGIGGG~~m~i~~~~~~~~~~idaREtAP~ 122 (579)
T KOG2410|consen 43 SDLEVYKRGAVASDSARCSEIGRSILRKGGNAVDAAIAALLCLGVVNPHSSGIGGGGFMTIYNKNTGKAEVIDARETAPA 122 (579)
T ss_pred ccchhhhceeeecCchHHHHHHHHHHHhcccHHHHHHHHHHhcccccccccccccceEEEEecCCCCceeEeeHHhhhhh
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhhccCccccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHhcCccc
Q 015611 145 AASQDMYENDTEAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVILNDRGL 224 (403)
Q Consensus 145 ~a~~~~~~~~~~~~~~G~~sv~VPG~l~Gl~~a~~~~G~L~w~~ll~PAI~LA~~Gf~V~~~la~~l~~~~~~i~~~~~~ 224 (403)
+++++||.++++....|++|++||||++|+|++||+||+|||++||+|+|+|||+||+|+++|+++++.....++.+|..
T Consensus 123 aa~~~mf~~~~~~~~~G~lsigVPGEi~Gl~~A~k~~G~lpW~~L~~P~i~La~~Gf~vs~~L~~~l~~~~~~~~~~~~~ 202 (579)
T KOG2410|consen 123 AATEDMFVNNPELSKVGALSIGVPGELAGLYEAHQKYGRLPWKQLFQPTIKLAREGFPVSKYLARALRRKEPYILLDPGL 202 (579)
T ss_pred hhcHHHhcCCcccceeccccccChHHHHHHHHHHHHhCCCCHHHhhhhHHHHhhcCccccHHHHHHHhccccchhhcccc
Confidence 99999999999888899999999999999999999999999999999999999999999999999999999989889888
Q ss_pred hhccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceeecCEEEeeCCe
Q 015611 225 RQVFAPNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMSANAMGY 304 (403)
Q Consensus 225 ~~~f~~~G~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~~~~g~ 304 (403)
+.+|.++|+++++||++++|.||+||++||++|++.||+|++|++||+++|++||+||++||++|++++.+|++.+++++
T Consensus 203 ~~l~~~~g~~~~~Ge~~~~p~LA~tLe~ia~~g~~~FY~G~~a~~lvkdiq~~GGiiT~qDl~~Y~~~v~~~l~~~~g~~ 282 (579)
T KOG2410|consen 203 WEIFARTGKVLKEGDKLKRPALAKTLELIANEGPEAFYNGELAQKLVKDIQKAGGIITEQDLENYEVRVEDPLCGDLGDY 282 (579)
T ss_pred hhhcccCCccCccCCeecChHHHHHHHHHHhcCcccccChHHHHHHHHHHHHhCCceEHHHHhhccceeEecccccCCCc
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCChHHHHHHHHHHHhcCCCCC---CCCchhHHHHHHHHHHHHHHhHhhCCCCCCCC-CchhHhhhCCHHHHH
Q 015611 305 TISGMPPPSSGTVGMSMILNIFDSYGSSD---SAKGNLGLHRLIEALKHMFAVRMTLGDPKFVN-NTNTLSEMLSPSYAE 380 (403)
Q Consensus 305 ~v~~~ppPssG~~~L~~~Lnile~~~~~~---~~~~~~~~h~lvEa~k~a~a~R~~lGDp~f~~-v~~~~~~lls~~~a~ 380 (403)
++|++||||+|.+++ .+||||++|++.. ....+..+|+++|++|+||++|++||||+|++ +.+.+++|+|++|++
T Consensus 283 ~v~~ppppssg~~l~-~~lnil~~y~~~~~~~~~~~~~~~h~liEa~K~a~a~R~~LGDp~f~~~~~ev~~~m~s~~~a~ 361 (579)
T KOG2410|consen 283 TVYGPPPPSSGAVLA-LILNILEGYNFSSLSGTEGRPLTLHRLIEAMKFAYAQRTRLGDPDFVPGVTEVVRNMLSKEFAA 361 (579)
T ss_pred eeecCCCCchHHHHH-HHHHHHhccCcccccccccchHHHHHHHHHHHHHHhhhhccCCcccchhHHHHHHHhcCHHHHH
Confidence 999999999999955 9999999998552 24567899999999999999999999999987 888899999999999
Q ss_pred HHHhhCCCCCCCCCCCCCCCCC
Q 015611 381 QIQLKIFDNTTFPPDYYMYRYS 402 (403)
Q Consensus 381 ~~r~~I~~~~t~~~~~Y~~~~~ 402 (403)
++|++|+|+++++.+||+++|.
T Consensus 362 ~ir~~I~d~~t~~~~~y~~~~~ 383 (579)
T KOG2410|consen 362 ELRKQISDSTTFPDSYYGPEYD 383 (579)
T ss_pred HHHHhccCCCcCchhhcccccc
Confidence 9999999999999999999875
No 6
>TIGR00066 g_glut_trans gamma-glutamyltranspeptidase. Also called gamma-glutamyltranspeptidase (ggt). Some members of this family have antibiotic synthesis or resistance activities. In the case of a cephalosporin acylase from Pseudomonas sp., the enzyme was shown to retain some gamma-glutamyltranspeptidase activity. Other, more distantly related proteins have ggt-related activities and score below the trusted cutoff.
Probab=100.00 E-value=6.6e-89 Score=715.56 Aligned_cols=323 Identities=40% Similarity=0.676 Sum_probs=303.6
Q ss_pred eEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceeEEeecCCCcEEEEEeecCcccCCChhhhc
Q 015611 73 GVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAPQAASQDMYE 152 (403)
Q Consensus 73 gaVas~~~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGgg~~lv~~~~~~~~~~id~r~~aP~~a~~~~~~ 152 (403)
|||||+||+||++|++||++||||||||||++||++||+||+||||||+||+||+++++++++||||++||..++++||.
T Consensus 1 g~Vas~~p~as~aG~~vL~~GGNAvDAAIAa~~~l~VveP~~sGiGGgg~~lv~~~~~~~~~~id~~~~aP~~a~~d~~~ 80 (516)
T TIGR00066 1 GMVASLHALASEIGEDILKEGGNAFDAAVAVGLALAVVEPFMTGLGGGGFMLISGKKTKDTTAIDFRERAPAKATRDMFL 80 (516)
T ss_pred CeEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhccccCCCCCceEEEEEECCCCeEEEEeCcccchhhCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999998889999999999999999999996
Q ss_pred cC--c---cccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHhcCc-cchh
Q 015611 153 ND--T---EAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVILNDR-GLRQ 226 (403)
Q Consensus 153 ~~--~---~~~~~G~~sv~VPG~l~Gl~~a~~~~G~L~w~~ll~PAI~LA~~Gf~V~~~la~~l~~~~~~i~~~~-~~~~ 226 (403)
++ . .....|+++|+|||+++||+++|+|||||||++||+|||+|||+||+|++.++..++...+.+.++| ++++
T Consensus 81 ~~~~~~~~~~~~~G~~sv~VPG~v~g~~~~~~~~G~L~w~~ll~PAI~lA~~Gf~v~~~l~~~~~~~~~~l~~~~~~~~~ 160 (516)
T TIGR00066 81 DKSGNPLPGKSLTGGLAIGVPGTVAGLEAALKKYGTLPLKDLIEPAIKLARNGFPINEALADTLELYEEVLLTTKEDSKD 160 (516)
T ss_pred hcCCCcCCccccCCcccccccchHHHHHHHHHHHccCCHHHHHHHHHHHHHcCccCCHHHHHHHHHHHHHHhhCcHHHHH
Confidence 32 1 1223589999999999999999999999999999999999999999999999999999988898888 8999
Q ss_pred ccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceeecCEEEeeCCeEE
Q 015611 227 VFAPNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMSANAMGYTI 306 (403)
Q Consensus 227 ~f~~~G~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~~~~g~~v 306 (403)
+|+++|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||.||.+||++|+++|++||+++|+||+|
T Consensus 161 ~f~~~g~~~~~G~~~~~p~LA~TL~~ia~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~y~~~~~~Pl~~~~~g~~v 240 (516)
T TIGR00066 161 IFNPTGKPLKEGDTLVQKDLAKSLELIAENGPDAFYKGDIAESIIDTLQKNGGIMTKKDLAAYDVEIRKPLSGDYRGYQV 240 (516)
T ss_pred HhccCCCcCCCCCEecCHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHcCCCCCHHHHhhCCeEEeCCeEEEecCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCChHHHHHHHHHHHhcCCCCCC-CCchhHHHHHHHHHHHHHHhHh-hCCCCCCCCCchhHhhhCCHHHHHHHHh
Q 015611 307 SGMPPPSSGTVGMSMILNIFDSYGSSDS-AKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEMLSPSYAEQIQL 384 (403)
Q Consensus 307 ~~~ppPssG~~~L~~~Lnile~~~~~~~-~~~~~~~h~lvEa~k~a~a~R~-~lGDp~f~~v~~~~~~lls~~~a~~~r~ 384 (403)
|++|||++|++++.++|||||+|+++.. .++++++|+++||+|+||++|. ++|||+|++++ +++|||++|++++++
T Consensus 241 ~~~ppP~sgg~~l~~~L~ile~~~~~~~~~~~~~~~h~l~ea~k~a~~~R~~~lgDp~f~~~~--~~~lls~~~a~~~~~ 318 (516)
T TIGR00066 241 YTTPPPSSGGIHLLQALNILENFDLSQYGDGSAETYQLLAEAMKLSYADRSRYLGDPEFVDVP--LEELLDKRYAKELAQ 318 (516)
T ss_pred EECCCCchHHHHHHHHHHhhhccCccccCCCcHHHHHHHHHHHHHHHHHHHHhCcCchhcccC--hhhccCHHHHHHHHh
Confidence 9999999999988899999999988653 4578899999999999999997 69999999886 889999999999999
Q ss_pred hCCCCCCCCC-CCC
Q 015611 385 KIFDNTTFPP-DYY 397 (403)
Q Consensus 385 ~I~~~~t~~~-~~Y 397 (403)
+|+++++.+. .+|
T Consensus 319 ~i~~~~~~~~~~~~ 332 (516)
T TIGR00066 319 SIKINKVDPKSTIY 332 (516)
T ss_pred hcCccccCcccccC
Confidence 9999887653 344
No 7
>PF01019 G_glu_transpept: Gamma-glutamyltranspeptidase; InterPro: IPR000101 Gamma-glutamyltranspeptidase (2.3.2.2 from EC) (GGT) [] catalyzes the transfer of the gamma-glutamyl moiety of glutathione to an acceptor that may be an amino acid, a peptide or water (forming glutamate). GGT plays a key role in the gamma-glutamyl cycle, a pathway for the synthesis and degradation of glutathione and drug and xenobiotic detoxification []. In prokaryotes and eukaryotes, it is an enzyme that consists of two polypeptide chains, a heavy and a light subunit, processed from a single chain precursor by an autocatalytic cleavage. The active site of GGT is known to be located in the light subunit. The sequences of mammalian and bacterial GGT show a number of regions of high similarity []. Pseudomonas cephalosporin acylases (3.5.1 from EC) that convert 7-beta-(4-carboxybutanamido)-cephalosporanic acid (GL-7ACA) into 7-aminocephalosporanic acid (7ACA) and glutaric acid are evolutionary related to GGT and also show some GGT activity []. Like GGT, these GL-7ACA acylases, are also composed of two subunits. As an autocatalytic peptidase GGT belongs to MEROPS peptidase family T3 (gamma-glutamyltransferase family, clan PB(T)). The active site residue for members of this family and family T1 is C-terminal to the autolytic cleavage site. The type example is gamma-glutamyltransferase 1 from Escherichia coli. ; GO: 0003840 gamma-glutamyltransferase activity; PDB: 2DBX_A 2Z8K_D 2Z8I_B 2DBU_D 2E0X_B 2DBW_B 2E0W_B 2DG5_A 2E0Y_C 2Z8J_C ....
Probab=100.00 E-value=1.8e-82 Score=666.56 Aligned_cols=312 Identities=44% Similarity=0.725 Sum_probs=262.2
Q ss_pred HHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceeEEeecCCCcEEEEEeecCcccCCChhhh--ccCccccccCCCc
Q 015611 87 ASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAPQAASQDMY--ENDTEAKYTGALS 164 (403)
Q Consensus 87 ~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGgg~~lv~~~~~~~~~~id~r~~aP~~a~~~~~--~~~~~~~~~G~~s 164 (403)
++||++||||||||||+++|++||+|++||||||+||+|||++++++++|||++++|..+++++| ......+..|+++
T Consensus 1 m~vL~~GGNAvDAAvAaa~~l~Vv~P~~~giGG~~~~lv~~~~~~~~~~id~~~~aP~~~~~~~~~~~~~~~~~~~g~~s 80 (510)
T PF01019_consen 1 MDVLRKGGNAVDAAVAAALALGVVEPHSSGIGGGGFMLVYDAKTGKVHAIDGRGRAPAAATPEMFDFKGNPKIPERGGLS 80 (510)
T ss_dssp HHHHHTT--HHHHHHHHHHHHHHHSTTT-STTSEEEEEEEETTSEEEEEEEE--BB-TT--TTTTTSCBBSCHHTSSGGG
T ss_pred ChHHHhCCCHHHHHHHHHHHHhhcCcccCCcccCcEEEEEecCCcceeEecCcchhhhhCChhhhhccCCchhcccCccc
Confidence 58999999999999999999999999999999999999999999999999999999999999999 4455677899999
Q ss_pred cccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHhcCccchhccccCCcccCCCCeecCH
Q 015611 165 IGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVILNDRGLRQVFAPNGKLLKSGDKCYNV 244 (403)
Q Consensus 165 v~VPG~l~Gl~~a~~~~G~L~w~~ll~PAI~LA~~Gf~V~~~la~~l~~~~~~i~~~~~~~~~f~~~G~~~~~Gd~l~~p 244 (403)
|+|||+++||+++|+|||+|||++||+|||+|||+||+|++.++..++...+.+.++|+++++|+++|+++++||+++||
T Consensus 81 v~vPG~~~g~~~~h~~~G~lpw~~l~~PAI~lA~~Gf~v~~~la~~l~~~~~~l~~~~~~~~~f~~~G~~~~~Gd~l~~p 160 (510)
T PF01019_consen 81 VAVPGAVAGLEEAHERYGTLPWADLLAPAIRLARDGFPVSPSLARALARNADKLRRDPGSRALFLPDGRPPREGDILRQP 160 (510)
T ss_dssp -BB--HHHHHHHHHHHH-SS-HHHHHHHHHHHHHH-EE--HHHHHHHHHHHHHHTTSHHHHHHHSTTSSE--TTSEE--H
T ss_pred cCCCcHHHHHHHHHHHhcchhHHHHHHHHHHHhcCCeEechhHHhHHHhHHHHHhhhhhHHHHhccCCCcCCCCCEEEHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceeecCEEEeeCCeEEEecCCCCChHHHHHHHHH
Q 015611 245 ELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMSANAMGYTISGMPPPSSGTVGMSMILN 324 (403)
Q Consensus 245 ~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~~~~g~~v~~~ppPssG~~~L~~~Ln 324 (403)
+||+||+.||++|+++||+|++|++|+++++++||.||.+||++|+++|++||+++|++++||++||||+|.+++ ++||
T Consensus 161 ~LA~TL~~ia~~G~~~FY~G~lA~~iv~~~~~~GG~lt~~Dla~Y~~~~~~Pl~~~~~~~~v~~~ppps~G~~ll-~~L~ 239 (510)
T PF01019_consen 161 ELADTLERIAEEGPDAFYRGELAEKIVADVQANGGLLTLEDLAAYQVEWREPLSTNYGGYTVYSPPPPSGGPALL-QALN 239 (510)
T ss_dssp HHHHHHHHHHHHTTHHHHSCHHHHHHHHHHHHTT-S--HHHHHH---EEE--EEEEETCEEEEE-TTCSHHHHHH-HHHH
T ss_pred HHHHHHHHHHhcCchhhcCChHHHHHHHHHHhccCCccHHHHhhcCCeEeccEEEEECCEEEeccCCCchHHHHH-HHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887755 9999
Q ss_pred HHhcCCCCC-CCCchhHHHHHHHHHHHHHHhHh-hCCCCCCCCCchhHhhhCCHHHHHHHHhhCCCCCCCC-CCCCCC
Q 015611 325 IFDSYGSSD-SAKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEMLSPSYAEQIQLKIFDNTTFP-PDYYMY 399 (403)
Q Consensus 325 ile~~~~~~-~~~~~~~~h~lvEa~k~a~a~R~-~lGDp~f~~v~~~~~~lls~~~a~~~r~~I~~~~t~~-~~~Y~~ 399 (403)
|||+|+++. ...+++++|+++|++|+||++|. ++|||+|++++..+++|||++|+++++++|+++++.+ +.+|..
T Consensus 240 iLe~~~~~~~~~~~~~~~h~l~ea~k~A~~~R~~~~gDp~~~~~~~~~~~lls~~~~~~~~~~i~~~~~~~~~~~~~~ 317 (510)
T PF01019_consen 240 ILEGFDLSSMGPNSPEYYHRLVEALKLAFADRDRYLGDPDFVPVPESVEQLLSKEYAAERRALIDDRRANPLPQYYGA 317 (510)
T ss_dssp HHCTSTGGGTTTTSHHHHHHHHHHHHHHHHHHHHHTSSTTTSSS-S-HHHHTSHHHHHHHHCT-BTTBS-SGGGCSCG
T ss_pred HhhcccccccccchHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHhcCHHHHHHHHhhcCccccccccccccC
Confidence 999999765 34579999999999999999997 5999999975445899999999999999999999887 455544
No 8
>cd04513 Glycosylasparaginase Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoproteins. This enzyme is an amidase located inside lysosomes. Mutation of this gene in humans causes a genetic disorder known as aspartylglycosaminuria (AGU). The glycosylasparaginase precursor undergoes autoproteolysis through an N-O or N-S acyl rearrangement of the peptide bond, which leads to the cleavage of a peptide bond between an Asp and a Thr. This proteolysis step generates an exposed N-terminal catalytic threonine and activates the enzyme.
Probab=79.07 E-value=4.3 Score=40.04 Aligned_cols=40 Identities=25% Similarity=0.404 Sum_probs=29.8
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCC--CCCCCCC
Q 015611 80 GHCSEIGASTLRLGGHAVDAAVATALCLGVVNPM--ASGIGGG 120 (403)
Q Consensus 80 ~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~--~sGiGGg 120 (403)
..|.+.|.++|++||+|.||.+++.-.+= -.|. .+|-|+-
T Consensus 9 ~~a~~~g~~~L~~G~salDAv~~av~~lE-d~p~f~naG~Gs~ 50 (263)
T cd04513 9 RNATDAAWEVLKAGGSALDAVEEGCSLCE-DDPCDKSVGYGGS 50 (263)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHh-hCcCcCCcccCcC
Confidence 47889999999999999999999855543 3354 2455543
No 9
>PLN02689 Bifunctional isoaspartyl peptidase/L-asparaginase
Probab=76.48 E-value=4.2 Score=41.20 Aligned_cols=40 Identities=23% Similarity=0.276 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCC
Q 015611 80 GHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGG 119 (403)
Q Consensus 80 ~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGG 119 (403)
..|.++|.++|++||+|.||.+++.-.+=--.-+.+|-|+
T Consensus 32 ~~al~~g~~~L~~g~saldAV~~av~~lEd~p~fnAG~Gs 71 (318)
T PLN02689 32 RRCLDLGIAALRSSLPALDVVELVVRELENDPLFNAGRGS 71 (318)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCccCc
Confidence 4688899999999999999999875444333223344443
No 10
>cd04702 ASRGL1_like ASRGL1_like domains, a subfamily of the L-Asparaginase type 2-like enzymes. The wider family includes Glycosylasparaginase, Taspase 1 and L-Asparaginase type 2 enzymes. The proenzymes undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue. ASRGL1, or asparaginase-like 1, has been cloned from mammalian testis cDNA libraries. It has been identified as a sperm antigen that may induce the production of autoantibodies following obstruction of the male reproductive tract, e.g. vasectomy.
Probab=73.19 E-value=6 Score=38.96 Aligned_cols=40 Identities=28% Similarity=0.345 Sum_probs=28.2
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCC
Q 015611 80 GHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGG 119 (403)
Q Consensus 80 ~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGG 119 (403)
..|.+.|.++|++||+|.||.+++.-.+=--.-+.+|.|+
T Consensus 26 ~~a~~~~~~~L~~g~saldAv~~av~~lEd~p~fnaG~Gs 65 (261)
T cd04702 26 KAAAEAGYKVLEQGGSALDAVEAAVRVMEDDPIFNAGYGS 65 (261)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCccCc
Confidence 4678889999999999999999984444322223444444
No 11
>PRK10226 isoaspartyl peptidase; Provisional
Probab=72.19 E-value=6 Score=39.99 Aligned_cols=39 Identities=28% Similarity=0.416 Sum_probs=29.5
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCC-CCCCCCC
Q 015611 80 GHCSEIGASTLRLGGHAVDAAVATALCLGVVNP-MASGIGG 119 (403)
Q Consensus 80 ~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P-~~sGiGG 119 (403)
..|.++|.++|++||+|.||.+++.-++=- .| +.+|-|+
T Consensus 33 ~~al~~g~~~L~~g~saldAV~~av~~lEd-~p~fNaG~Gs 72 (313)
T PRK10226 33 SAIVETGQKMLEAGESALDVVTEAVRLLEE-CPLFNAGIGA 72 (313)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCCcccCC
Confidence 467889999999999999999988555544 45 4555554
No 12
>PF01112 Asparaginase_2: Asparaginase; InterPro: IPR000246 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Threonine peptidases are characterised by a threonine nucleophile at the N terminus of the mature enzyme. The threonine peptidases belong to clan PB or are unassigned, clan T-. The type example for this clan is the archaean proteasome beta component of Thermoplasma acidophilum. This group of sequences have a signature that places them in MEROPS peptidase family T2 (clan PB(T)). The glycosylasparaginases (3.5.1.26 from EC) are threonine peptidases. Also in this family is L-asparaginase (3.5.1.1 from EC), which catalyses the following reaction: L-asparagine + H2O = L-aspartate + NH3 Glycosylasparaginase catalyses: N4-(beta-N-acetyl-D-glucosaminyl)-L-asparagine + H(2)O = N-acetyl-beta-glucosaminylamine + L-aspartate cleaving the GlcNAc-Asn bond that links oligosaccharides to asparagine in N-linked glycoproteins. The enzyme is composed of two non-identical alpha/beta subunits joined by strong non-covalent forces and has one glycosylation site located in the alpha subunit [] and plays a major role in the degradation of glycoproteins.; GO: 0016787 hydrolase activity; PDB: 1APY_D 1APZ_C 2GEZ_E 2GL9_B 2GAC_D 2GAW_C 1AYY_A 1P4V_C 9GAF_A 1P4K_A ....
Probab=65.93 E-value=10 Score=38.41 Aligned_cols=41 Identities=29% Similarity=0.322 Sum_probs=28.6
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCC
Q 015611 80 GHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGG 120 (403)
Q Consensus 80 ~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGg 120 (403)
..|.+.|.++|++||+|.||.+++.-.|==-.-+.+|.|+-
T Consensus 31 ~~a~~~~~~~L~~g~~aldAV~~Av~~LEd~p~fNaG~Gs~ 71 (319)
T PF01112_consen 31 RDALEAGYEVLKKGGSALDAVEAAVRVLEDDPLFNAGYGSV 71 (319)
T ss_dssp HHHHHHHHHHHHTT--HHHHHHHHHHHHHHSTTSSSSTTSS
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCCCccCCCC
Confidence 36789999999999999999997655553333455666654
No 13
>cd04701 Asparaginase_2 L-Asparaginase type 2. L-Asparaginase hydrolyzes L-asparagine to L-aspartate and ammonia. The proenzyme undergoes an autoproteolytic cleavage into alpha and beta subunits to expose a threonine residue which becomes the N-terminal residue of the beta subunit. The threonine residue plays a central role in hydrolase activity. Some asparaginases can also hydrolyze L-glutamine and are termed glutaminase-asparaginase. This is a member of the Ntn-hydrolase superfamily.
Probab=65.59 E-value=11 Score=37.25 Aligned_cols=40 Identities=33% Similarity=0.383 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCC
Q 015611 80 GHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGG 119 (403)
Q Consensus 80 ~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGG 119 (403)
..|.+.|.++|++||+|.||.+++.-++=--.-+.+|-|+
T Consensus 29 ~~al~~~~~~L~~g~saldAv~~av~~lEd~p~fNaG~Gs 68 (260)
T cd04701 29 RAALEAGHAVLAAGGSALDAVVAAVRLLEDSPLFNAGKGA 68 (260)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCccCc
Confidence 4566789999999999999999875554333333455444
No 14
>PLN02937 Putative isoaspartyl peptidase/L-asparaginase
Probab=63.63 E-value=11 Score=39.56 Aligned_cols=41 Identities=27% Similarity=0.310 Sum_probs=28.6
Q ss_pred hhHHHHHHHHHhcC-CCHHHHHHHHHHHhhhcCCCCCCCCCC
Q 015611 80 GHCSEIGASTLRLG-GHAVDAAVATALCLGVVNPMASGIGGG 120 (403)
Q Consensus 80 ~~as~~G~~vL~~G-GNAvDAAVA~al~l~Vv~P~~sGiGGg 120 (403)
..|.++|.++|++| |+|+||.+++.-.+=--.-+.+|.|+-
T Consensus 36 ~~A~~aa~~~L~~g~gsalDAV~aAv~~LEd~p~fNAG~Gs~ 77 (414)
T PLN02937 36 RRACLAAAAILRQGSGGCIDAVSAAIQVLEDDPSTNAGRGSN 77 (414)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCCCCCccCcC
Confidence 35678899999999 999999998754443222245565554
No 15
>cd04514 Taspase1_like Taspase1_like domains; Taspase1 catalyzes the cleavage of the mix lineage leukemia (MLL) nuclear protein and transcription factor TFIIA. Taspase1 is a threonine aspartase, a member of the Ntn hydrolase superfamily and the type 2 asparaginase family. A threonine residue acts as the active site nucleophile in both endopeptidease and protease activities to cleave polypeptide substrates after an aspartate residue. The Taspase1 proenzyme undergoes autoproteolysis into alpha and beta subunits. The N-terminal residue of the beta subunit is a threonine which is the active catalytic residue. The active enzyme is a heterotetramer.
Probab=62.67 E-value=13 Score=37.46 Aligned_cols=41 Identities=29% Similarity=0.357 Sum_probs=30.5
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCC
Q 015611 80 GHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGG 120 (403)
Q Consensus 80 ~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGg 120 (403)
..|.+.|.++|++||+|.||.+++.-++=--.-+.+|-|+-
T Consensus 25 ~~al~~~~~~L~~g~saldAv~~av~~lEd~p~fNaG~Gs~ 65 (303)
T cd04514 25 KRACQKAIELLRAGGSALDAVVAAIQVLEDSPLTNAGYGSN 65 (303)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCCccCcC
Confidence 45788899999999999999998866554443445665543
No 16
>cd04512 Ntn_Asparaginase_2_like Ntn-hydrolase superfamily, L-Asparaginase type 2-like enzymes. This family includes Glycosylasparaginase, Taspase 1 and L-Asparaginase type 2 enzymes. Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoprotein. Taspase1 catalyzes the cleavage of the Mix Lineage Leukemia (MLL) nuclear protein and transcription factor TFIIA. L-Asparaginase type 2 hydrolyzes L-asparagine to L-aspartate and ammonia. The proenzymes of this family undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue.
Probab=55.13 E-value=21 Score=34.97 Aligned_cols=39 Identities=28% Similarity=0.352 Sum_probs=28.1
Q ss_pred hHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCC
Q 015611 81 HCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGG 119 (403)
Q Consensus 81 ~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGG 119 (403)
.|.+.|.++|++||+|.||.+++.-++=--.-+.+|-|+
T Consensus 24 ~a~~~~~~~l~~g~saldAv~~av~~lEd~p~~NaG~Gs 62 (248)
T cd04512 24 RAAQEGWKVLQKGGSALDAVEAAVRLLEDSPLFNAGYGS 62 (248)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCCccCc
Confidence 466889999999999999999886555333334455444
No 17
>PF04157 EAP30: EAP30/Vps36 family; InterPro: IPR007286 EAP30 is a subunit of the ELL complex. The ELL is an 80kDa RNA polymerase II transcription factor. ELL interacts with three other proteins to form the complex known as ELL complex. The ELL complex is capable of increasing that catalytic rate of transcription elongation, but is unable to repress initiation of transcription by RNA polymerase II as is the case of ELL. EAP30 is thought to lead to the derepression of ELL's transcriptional inhibitory activity. ; PDB: 2ZME_A 3CUQ_A 1W7P_D 1U5T_B.
Probab=33.23 E-value=14 Score=35.19 Aligned_cols=66 Identities=18% Similarity=0.196 Sum_probs=39.0
Q ss_pred CccCchHHHHHHHHHHh----cCCccCHhhhccCCce----------------------eecCEEE-eeC-CeEEEecCC
Q 015611 260 ALYNGTVGEKLVKDVRE----AGGILTIEDLRSYKVD----------------------VMDAMSA-NAM-GYTISGMPP 311 (403)
Q Consensus 260 ~FY~G~ia~~lv~~~~~----~GG~lt~~DL~~Y~~~----------------------~~~pl~~-~~~-g~~v~~~pp 311 (403)
.||. ++|.+|++.+.. +||+|++.|+-..--+ ...|+++ +|+ |..+..++|
T Consensus 90 ~f~~-ELa~qi~e~c~~~~~~~GGii~L~dl~~~~nr~R~g~~lISp~Di~~A~~~l~~lg~g~~l~~~~sg~~vv~s~~ 168 (223)
T PF04157_consen 90 DFYY-ELAVQIAEVCLATRSKNGGIISLSDLYCRYNRARGGSELISPEDILRACKLLEVLGLGFRLRKFGSGVKVVQSVP 168 (223)
T ss_dssp HHHH-HHHHHHHHHHHHHCCTTTSEEEHHHHHHHHHHCTTTSST--HHHHHHHHHHHCCCTSSEEEEEETTTEEEEECST
T ss_pred hHHH-HHHHHHHHHHHHHHhcCCCEEEHHHHHHHHHHhcccCCCcCHHHHHHHHHHHHHcCCCeEEEEeCCCcEEEEeCC
Confidence 4566 788888888764 7888888887542111 1234443 466 777776666
Q ss_pred CCChHHHHHHHHHHH
Q 015611 312 PSSGTVGMSMILNIF 326 (403)
Q Consensus 312 PssG~~~L~~~Lnil 326 (403)
.+.=......+|.++
T Consensus 169 ~~e~~~~~~~il~~~ 183 (223)
T PF04157_consen 169 YSELSKDQSRILELA 183 (223)
T ss_dssp -CHH-HHHHHHHHHH
T ss_pred chhhhHHHHHHHHHH
Confidence 554223344667776
No 18
>COG1446 Asparaginase [Amino acid transport and metabolism]
Probab=32.44 E-value=54 Score=33.05 Aligned_cols=27 Identities=37% Similarity=0.466 Sum_probs=21.4
Q ss_pred hHHHHHHHHHhcCCCHHHHHHHHHHHh
Q 015611 81 HCSEIGASTLRLGGHAVDAAVATALCL 107 (403)
Q Consensus 81 ~as~~G~~vL~~GGNAvDAAVA~al~l 107 (403)
.+.++|..+|..||+|.||++++.-.+
T Consensus 29 ~a~~ag~~~l~~g~sALDAVv~Av~~m 55 (307)
T COG1446 29 AAVEAGYQLLSAGGSALDAVVEAVRVL 55 (307)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 345667789999999999999985444
No 19
>KOG3341 consensus RNA polymerase II transcription factor complex subunit [Transcription]
Probab=26.81 E-value=46 Score=32.09 Aligned_cols=66 Identities=20% Similarity=0.383 Sum_probs=39.9
Q ss_pred HHHHHHHhcCccchhcccc----CC-cccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHH----hcCCccC
Q 015611 212 ANKAEVILNDRGLRQVFAP----NG-KLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVR----EAGGILT 282 (403)
Q Consensus 212 ~~~~~~i~~~~~~~~~f~~----~G-~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~----~~GG~lt 282 (403)
.++...|.++|.+|.-|.. =| .|+.-|+-++-.- -|...||- +++=++++-+- .+||+||
T Consensus 50 ~kH~~ei~knsqFR~~Fq~Mca~IGvDPlas~kgfw~~~----------lgvgdFYY-elgVqviEvC~at~~~nGGlis 118 (249)
T KOG3341|consen 50 RKHKTEIRKNSQFRNQFQEMCASIGVDPLASGKGFWAEL----------LGVGDFYY-ELGVQVIEVCLATKHTNGGLIS 118 (249)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHcCCCccccCcchHHHH----------hhhHHHHH-HHhhHHHHHHHHhhcccCCeee
Confidence 3445567777777776621 12 3444444222111 25566775 66667776654 4799999
Q ss_pred Hhhhcc
Q 015611 283 IEDLRS 288 (403)
Q Consensus 283 ~~DL~~ 288 (403)
.++|.+
T Consensus 119 lqel~~ 124 (249)
T KOG3341|consen 119 LQELCN 124 (249)
T ss_pred HHHHHH
Confidence 999988
No 20
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD. Currently three, structurally and catalytically, different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Iron-containing ADH's have been found in yeast (gene ADH4) [], as well as in Zymomonas mobilis (gene adhB) []. These two iron-containing ADH's are closely related to the following enzymes: Escherichia coli propanediol oxidoreductase (1.1.1.77 from EC) (gene fucO) [], an enzyme involved in the metabolism of fucose and which also seems to contain ferrous ion(s). Clostridium acetobutylicum NADPH- and NADH-dependent butanol dehydrogenases (1.1.1 from EC) (genes adh1, bdhA and bdhB) [], an enzyme which has activity using butanol and ethanol as substrates. E. coli adhE [], an iron-dependent enzyme which harbor three different activities: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating) (1.2.1.10 from EC) and pyruvate-formate-lyase deactivase. Bacterial glycerol dehydrogenase (1.1.1.6 from EC) (gene gldA or dhaD) []. Clostridium kluyveri NAD-dependent 4-hydroxybutyrate dehydrogenase (4hbd) (1.1.1.61 from EC). Citrobacter freundii and Klebsiella pneumoniae 1,3-propanediol dehydrogenase (1.1.1.202 from EC) (gene dhaT). Bacillus methanolicus NAD-dependent methanol dehydrogenase (1.1.1.244 from EC) []. E. coli and Salmonella typhimurium ethanolamine utilization protein eutG. E. coli hypothetical protein yiaY. ; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1RRM_A 2BL4_A 2BI4_A 3BFJ_R 1KQ3_A 1JQ5_A 1JPU_A 1JQA_A 3JZD_A 3UHJ_A ....
Probab=24.47 E-value=1.2e+02 Score=30.81 Aligned_cols=85 Identities=27% Similarity=0.330 Sum_probs=56.3
Q ss_pred CCCHHHHHHHHHHHhh----------------------hcCCCCCCCCCC--ceeEEeecCCCcEEEEEeecCcccCCCh
Q 015611 93 GGHAVDAAVATALCLG----------------------VVNPMASGIGGG--AFMVLRSSATSQTLAFDMRETAPQAASQ 148 (403)
Q Consensus 93 GGNAvDAAVA~al~l~----------------------Vv~P~~sGiGGg--g~~lv~~~~~~~~~~id~r~~aP~~a~~ 148 (403)
||++.|+|=++++++. +.-|..+|-|-- .+++++|..++....+-.....|..+=.
T Consensus 87 GGS~~D~aK~va~~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtGsE~t~~avi~d~~~~~k~~~~~~~~~P~~~i~ 166 (366)
T PF00465_consen 87 GGSVMDAAKAVALLLANPGDLRDLLGKGPPPTKPALPLIAIPTTAGTGSEVTPYAVIYDEEGGRKLSIRSPKLYPDAAIL 166 (366)
T ss_dssp SHHHHHHHHHHHHHHTSSSCGGGGGCECSCCSS--SEEEEEESSSSSSGCCSSEEEEEETTTTEEEEEEEGGGS-SEEEE
T ss_pred CCCcCcHHHHHHhhccCCCcHHHHHhhccccccCCCcEEEeeCCccccccccccccccccccceeccccCcccCcceeEe
Confidence 8999999999998887 334555555533 5678888777777677776667765421
Q ss_pred hhhccCccccccCCCccccccHHHHHHHHHHhcC
Q 015611 149 DMYENDTEAKYTGALSIGVPGEIAGLHEAWLKHG 182 (403)
Q Consensus 149 ~~~~~~~~~~~~G~~sv~VPG~l~Gl~~a~~~~G 182 (403)
+++....=+..+.+-|.+++|..+.+.|-
T Consensus 167 -----Dp~l~~~lP~~~~~~~~~dal~haiE~~~ 195 (366)
T PF00465_consen 167 -----DPELTATLPPRLTASGGLDALAHAIEAYL 195 (366)
T ss_dssp -----EGGGGTTS-HHHHHHHHHHHHHHHHHHHH
T ss_pred -----cHHhhcCCCHHHHhhhHHHHHHHHHHHHh
Confidence 11111222446777788899988888764
No 21
>cd08180 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism. 1,3-propanediol dehydrogenase (PPD) plays a role in glycerol metabolism of some bacteria in anaerobic conditions. In this degradation pathway, glycerol is converted in a two-step process to 1,3-propanediol (1,3-PD) which is then excreted into the extracellular medium. The first reaction involves the transformation of glycerol into 3-hydroxypropionaldehyde (3-HPA) by a coenzyme B-12-dependent dehydratase. The second reaction involves the dismutation of the 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol by the NADH-linked 1,3-propanediol dehydrogenase (PPD). The enzyme require iron ion for its function. Because many genes in this pathway are present in the pdu (propanediol utilisation) operon, they are also named pdu genes. PPD is a member of the iron-containing alcohol dehydrogenase superfamily. The PPD structure has a dehydroquinat
Probab=24.23 E-value=1.2e+02 Score=30.50 Aligned_cols=84 Identities=26% Similarity=0.263 Sum_probs=51.0
Q ss_pred CCCHHHHHHHHHHHhh----------hcCCCCCCCCCCc--eeEEeecCCCcEEEEEeecCcccCCChhhhccCcccccc
Q 015611 93 GGHAVDAAVATALCLG----------VVNPMASGIGGGA--FMVLRSSATSQTLAFDMRETAPQAASQDMYENDTEAKYT 160 (403)
Q Consensus 93 GGNAvDAAVA~al~l~----------Vv~P~~sGiGGgg--~~lv~~~~~~~~~~id~r~~aP~~a~~~~~~~~~~~~~~ 160 (403)
||++.|+|=++++... +.-|..+|-|.-. +.+++|.+++.-..+......|..+=. ++.....
T Consensus 87 GGs~~D~aKa~a~~~~~~~~~~~~p~i~VPTtagtgse~t~~avi~~~~~~~k~~~~~~~~~p~~~i~-----Dp~l~~~ 161 (332)
T cd08180 87 GGSAIDAAKAIIYFAKKLGKKKKPLFIAIPTTSGTGSEVTSFAVITDPETGVKYPLVDDELLPDIAIL-----DPELVKT 161 (332)
T ss_pred CchHHHHHHHHHHHHhCCCCCCCCCEEEeCCCCcchHhhCCeEEEEecCCCeeEEeeCCCccCCEEEE-----Cchhhcc
Confidence 8899999966655443 6678888777653 788887776665666554455654311 1111111
Q ss_pred CCCccccccHHHHHHHHHHhc
Q 015611 161 GALSIGVPGEIAGLHEAWLKH 181 (403)
Q Consensus 161 G~~sv~VPG~l~Gl~~a~~~~ 181 (403)
=+..+..=|.++.+..+.+.|
T Consensus 162 ~P~~~~~~~~~Dal~h~~E~~ 182 (332)
T cd08180 162 VPPAVTADTGMDVLTHALEAY 182 (332)
T ss_pred CCHHHHHHhHHHHHHHHHHHH
Confidence 233444556667777776655
No 22
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=24.08 E-value=3.2e+02 Score=29.59 Aligned_cols=71 Identities=18% Similarity=0.241 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHhC---CCCcc-CchHHHHHHHHHHhcCCccCHhhhccCCceeecCEEEeeCCeEEEecCCCCChHHHH
Q 015611 244 VELAQSLEALAEQG---PEALY-NGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMSANAMGYTISGMPPPSSGTVGM 319 (403)
Q Consensus 244 p~LA~TL~~ia~~G---~~~FY-~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~~~~g~~v~~~ppPssG~~~L 319 (403)
-.||++.++|.-.- ..+.| +|+..+.|.+.+-+... +.+.++++.|..+..-|...+++
T Consensus 180 ~ala~~iqrLvVDhLHiVGDIyDRGP~pd~Imd~L~~yhs-----------------vDiQWGNHDilWmgA~sGs~vc~ 242 (648)
T COG3855 180 IALAYLIQRLVVDHLHIVGDIYDRGPYPDKIMDTLINYHS-----------------VDIQWGNHDILWMGAASGSKVCM 242 (648)
T ss_pred HHHHHHHHHHhhhheeeecccccCCCCchHHHHHHhhccc-----------------ccccccCcceEEeecccCChHHH
Confidence 36778888776432 34566 88988888877655433 66778999999999999999999
Q ss_pred HHHHHHHhcCCC
Q 015611 320 SMILNIFDSYGS 331 (403)
Q Consensus 320 ~~~Lnile~~~~ 331 (403)
+-+++|..+|+-
T Consensus 243 aNvIRIcaRY~N 254 (648)
T COG3855 243 ANVIRICARYDN 254 (648)
T ss_pred HHHHHHHHhhcc
Confidence 999999998864
No 23
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=23.45 E-value=44 Score=36.29 Aligned_cols=84 Identities=18% Similarity=0.174 Sum_probs=49.1
Q ss_pred CCCCC--CCcee-EEeecCCCcEEEEEeecCcccCCChhhhccCccccccCCCccccccHHHHHHHHHHhcC-CCCHHHh
Q 015611 114 ASGIG--GGAFM-VLRSSATSQTLAFDMRETAPQAASQDMYENDTEAKYTGALSIGVPGEIAGLHEAWLKHG-RLAWRAL 189 (403)
Q Consensus 114 ~sGiG--Ggg~~-lv~~~~~~~~~~id~r~~aP~~a~~~~~~~~~~~~~~G~~sv~VPG~l~Gl~~a~~~~G-~L~w~~l 189 (403)
-.-+| |+.|+ +-| ...|.....|+|+-|-.+-. .|..... =+--+..==.-+=||-++|+|| ++||.||
T Consensus 88 PAD~GhYGplfIRmAW-HsAGTYRi~DGRGGa~~G~q--RFaPlnS----WPDN~nLDKarRLLWPIKkKYG~kiSWaDL 160 (730)
T COG0376 88 PADFGHYGPLFIRMAW-HSAGTYRIGDGRGGAGGGQQ--RFAPLNS----WPDNANLDKARRLLWPIKKKYGRKISWADL 160 (730)
T ss_pred cccccccccceeeeee-cccCceecccCCCCCCCCce--ecccccC----CCcccchHHHHHHhhhHhHhhcccccHhHh
Confidence 44455 66665 557 56788999999987655421 1211000 0011112223567899999999 8999999
Q ss_pred HHHH--HHHHhcCCccC
Q 015611 190 FQPA--IKLAKEGFVVA 204 (403)
Q Consensus 190 l~PA--I~LA~~Gf~V~ 204 (403)
+-=+ +.+-.-||+.-
T Consensus 161 ~iLaGnvAlEsMGfktf 177 (730)
T COG0376 161 IILAGNVALESMGFKTF 177 (730)
T ss_pred hhhhchhhhhhcCCccc
Confidence 7433 34444455543
No 24
>PF05015 Plasmid_killer: Plasmid maintenance system killer protein; InterPro: IPR007711 Several plasmids with proteic killer gene systems have been reported. All of them encode a stable toxin and an unstable antidote. Upon loss of the plasmid, the less stable inhibitor is inactivated more rapidly than the toxin, allowing the toxin to be activated. The activation of those systems result in cell filamentation and cessation of viable cell production. It has been verified that both the stable killer and the unstable inhibitor of the systems are short polypeptides. This family corresponds to the toxin.
Probab=22.31 E-value=1.2e+02 Score=24.83 Aligned_cols=55 Identities=24% Similarity=0.369 Sum_probs=39.8
Q ss_pred HHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceeecCEEEeeCC
Q 015611 249 SLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMSANAMG 303 (403)
Q Consensus 249 TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~~~~g 303 (403)
-|+.+.+.|...-+...+++++..-++..-..-+.+||.......-.+|+.+..|
T Consensus 9 ~l~~l~~~~~~k~~~~~~~~~~~~~L~~L~aa~~~~dl~~~p~~r~h~L~G~~~g 63 (93)
T PF05015_consen 9 KLEKLFEDGKTKKIPADIAKKLRRRLDQLDAATSLEDLRSPPSNRLHKLKGDRKG 63 (93)
T ss_pred HHHHHHCCCCcCCcCHHHHHHHHHHHHHHHhCCCHHHHhcCcCCCcccccCCCCC
Confidence 4566666666555666788888888888777888999988876666777665443
No 25
>cd08192 Fe-ADH7 Iron-containing alcohol dehydrogenases-like, involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. NAD-dependent iron-containing alcohol dehydrogenase-like. Proteins in this family are NAD-dependent alcohol dehydrogenases which are involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. They catalyze the oxidation of beta-hydroxy CoA ester to beta-oxo CoA ester, which then be subject to CoA-dependent thiolysis to yield acetyl-CoA and 6-C8-SPC-CoA. The major laundry surfactant in worldwide use is commercial linear alkylbenzenesulfonate (LAS) which contains 20 congeners of linear alkanes (C10 to C13). LAS is fully biodegradable in oxic environments. Degradation involves microbial communities. Parvibaculum lavamentivorans DS-1T is a representative member of many heterotrophic, LAS-degrading communities, in which it catalyzes the first steps of LAS degradation. Strain DS-1T is a small heterotrophic bacterium able to omega-oxygenate the comm
Probab=22.24 E-value=1.9e+02 Score=29.33 Aligned_cols=84 Identities=25% Similarity=0.279 Sum_probs=50.1
Q ss_pred CCCHHHHHHHHHHHhh-------------------------hcCCCCCCCCCC--ceeEEeecCCCcEEEEEeecCcccC
Q 015611 93 GGHAVDAAVATALCLG-------------------------VVNPMASGIGGG--AFMVLRSSATSQTLAFDMRETAPQA 145 (403)
Q Consensus 93 GGNAvDAAVA~al~l~-------------------------Vv~P~~sGiGGg--g~~lv~~~~~~~~~~id~r~~aP~~ 145 (403)
||+++|+|=++++.+. ++-|..+|=|.- .+.+++|..++.-..+......|..
T Consensus 90 GGSviD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagtgse~t~~avi~~~~~~~K~~~~~~~~~P~~ 169 (370)
T cd08192 90 GGSALDLAKAVALMAGHPGPLWDYEDIEGGWPRITDAIPPLIAIPTTAGTGSEVGRAAVITDEDTGRKLIIFSPHLLPKA 169 (370)
T ss_pred CchHHHHHHHHHHHHhCCCCHHHHhcccccccccCCCCCCEEEecCCCchhhhhCCceEEEeCCCCeeEEeeCCcccCCE
Confidence 7899999966666542 566777776643 4567777766666667665556654
Q ss_pred CChhhhccCccccccCCCccccccHHHHHHHHHHhc
Q 015611 146 ASQDMYENDTEAKYTGALSIGVPGEIAGLHEAWLKH 181 (403)
Q Consensus 146 a~~~~~~~~~~~~~~G~~sv~VPG~l~Gl~~a~~~~ 181 (403)
+=. ++.....=+..+..-|.++.|..+.+.|
T Consensus 170 ~i~-----Dp~l~~~~P~~~~a~~~~Dal~h~~E~~ 200 (370)
T cd08192 170 AIC-----DPELTLGLPAGLTAATGMDALTHCIEAY 200 (370)
T ss_pred EEE-----ChhhhhCCCHHHHHHHHHHHHHHHHHHH
Confidence 311 1111112234555566677777666665
No 26
>PF15505 DUF4648: Domain of unknown function (DUF4648)
Probab=21.59 E-value=66 Score=29.32 Aligned_cols=26 Identities=27% Similarity=0.325 Sum_probs=22.8
Q ss_pred cccccCCCccccccHHHHHHHHHHhc
Q 015611 156 EAKYTGALSIGVPGEIAGLHEAWLKH 181 (403)
Q Consensus 156 ~~~~~G~~sv~VPG~l~Gl~~a~~~~ 181 (403)
..+.+|..+.|||+.++-+|.-|++-
T Consensus 131 SlPLTG~~scG~P~iLRKMW~rHKKK 156 (170)
T PF15505_consen 131 SLPLTGSASCGVPSILRKMWMRHKKK 156 (170)
T ss_pred cccccCCcccCccHHHHHHHHhhhhh
Confidence 35678999999999999999999863
No 27
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like. Large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases; insect-type, or short-chain alcohol dehydrogenases; iron-containing alcohol dehydrogenases, and others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.
Probab=21.01 E-value=1.8e+02 Score=29.54 Aligned_cols=85 Identities=26% Similarity=0.316 Sum_probs=54.4
Q ss_pred CCCHHHHHHHHHHHh---------------------hhcCCCCCCCCCC--ceeEEeecCCCcEEEEEeecCcccCCChh
Q 015611 93 GGHAVDAAVATALCL---------------------GVVNPMASGIGGG--AFMVLRSSATSQTLAFDMRETAPQAASQD 149 (403)
Q Consensus 93 GGNAvDAAVA~al~l---------------------~Vv~P~~sGiGGg--g~~lv~~~~~~~~~~id~r~~aP~~a~~~ 149 (403)
||++.|+|=++++.+ -++-|..+|-|+- .+++++|...+....++.....|..+=.
T Consensus 89 GGs~~D~AK~va~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTt~gtgse~t~~avi~d~~~~~K~~~~~~~~~P~~~i~- 167 (370)
T cd08551 89 GGSVLDTAKAIALLATNPGDIWDYEGGKPVIKPALPLIAIPTTAGTGSEVTPFAVITDEETGEKYGIASPELLPDVAIL- 167 (370)
T ss_pred CchHHHHHHHHHHHHhCCCcHHHHhCcccccCCCCCEEEecCCCcchhhcCCeEEEEECCCCeeEEEeCCCccCCEEEE-
Confidence 899999996666554 2455666666654 4567787766766778776666764311
Q ss_pred hhccCccccccCCCccccccHHHHHHHHHHhcC
Q 015611 150 MYENDTEAKYTGALSIGVPGEIAGLHEAWLKHG 182 (403)
Q Consensus 150 ~~~~~~~~~~~G~~sv~VPG~l~Gl~~a~~~~G 182 (403)
+++....=+..+..-|.++.+..+.+.|-
T Consensus 168 ----Dp~l~~~~P~~~~~a~~~Dal~h~~E~~~ 196 (370)
T cd08551 168 ----DPELTYTLPPALTAATGMDALTHAIEAYV 196 (370)
T ss_pred ----ChHhhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 12222223456777788888888887653
No 28
>PF12836 HHH_3: Helix-hairpin-helix motif; PDB: 2EDU_A 2OCE_A 3BZK_A 3BZC_A 2DUY_A.
Probab=20.33 E-value=97 Score=23.50 Aligned_cols=28 Identities=18% Similarity=0.291 Sum_probs=22.3
Q ss_pred CchHHHHHHHHHHhcCCccCHhhhccCC
Q 015611 263 NGTVGEKLVKDVREAGGILTIEDLRSYK 290 (403)
Q Consensus 263 ~G~ia~~lv~~~~~~GG~lt~~DL~~Y~ 290 (403)
+-..|++|++.=++.|++-+.+||..-.
T Consensus 23 ~~~~A~~Iv~~R~~~G~f~s~~dL~~v~ 50 (65)
T PF12836_consen 23 GPKQAKAIVEYREKNGPFKSLEDLKEVP 50 (65)
T ss_dssp -HHHHHHHHHHHHHH-S-SSGGGGGGST
T ss_pred CHHHHHHHHHHHHhCcCCCCHHHHhhCC
Confidence 5689999999999999999999998643
Done!