Query 015611
Match_columns 403
No_of_seqs 171 out of 1354
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 15:37:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015611.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015611hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qmc_A GGT, gamma-glutamyltran 100.0 1.8E-99 6E-104 764.5 33.3 333 66-401 29-369 (377)
2 2dg5_A Gamma-glutamyltranspept 100.0 9.6E-99 3E-103 757.7 30.8 334 64-400 16-357 (366)
3 2v36_A Gamma-glutamyltranspept 100.0 7.1E-98 2E-102 754.1 36.6 331 65-400 13-351 (376)
4 2e0w_A Gamma-glutamyltranspept 100.0 3.7E-95 1.3E-99 765.5 32.6 334 64-400 16-357 (556)
5 2nlz_A Cephalosporin acylase; 100.0 2.7E-93 9.1E-98 750.1 34.9 328 64-398 15-352 (547)
6 3g9k_L Capsule biosynthesis pr 100.0 7E-93 2.4E-97 702.7 29.1 299 67-389 15-315 (323)
7 2i3o_A Gamma-glutamyltransfera 100.0 2.7E-90 9.2E-95 723.4 31.3 311 64-381 4-317 (516)
8 1apy_A Aspartylglucosaminidase 90.5 0.27 9.3E-06 43.7 4.8 42 78-120 12-55 (162)
9 1k2x_A Putative L-asparaginase 87.5 0.71 2.4E-05 41.6 5.4 41 80-120 32-72 (177)
10 2gez_A L-asparaginase alpha su 86.7 0.82 2.8E-05 41.8 5.4 40 81-120 36-75 (195)
11 4gdv_A L-asparaginase; NTN enz 86.4 0.74 2.5E-05 45.0 5.3 41 80-120 30-70 (310)
12 1p4k_A N(4)-(beta-N-acetylgluc 86.3 1.1 3.7E-05 43.5 6.3 46 74-120 7-56 (295)
13 3c17_A L-asparaginase precurso 77.7 2.6 8.9E-05 41.3 5.4 41 80-120 32-72 (320)
14 2a8j_A Taspase 1, threonine as 73.9 3.6 0.00012 41.8 5.4 39 81-120 67-106 (420)
15 1u5t_A Appears to BE functiona 56.9 7.7 0.00026 36.3 3.6 31 259-290 89-123 (233)
16 3cuq_A Vacuolar-sorting protei 54.6 4.3 0.00015 38.0 1.5 69 208-288 24-102 (234)
17 1u5t_B Defective in vacuolar p 36.4 11 0.00038 33.3 1.1 25 261-286 12-45 (169)
18 3cuq_B Vacuolar protein-sortin 28.6 18 0.00063 33.2 1.3 29 259-288 71-103 (218)
19 2xvc_A ESCRT-III, SSO0910; cel 27.5 23 0.00077 26.1 1.3 25 268-292 13-38 (59)
20 2euc_A Hypothetical protein YF 26.6 47 0.0016 27.5 3.2 38 348-387 48-85 (130)
21 3gxq_A Putative regulator of t 20.2 34 0.0012 23.7 1.0 16 78-93 34-49 (54)
22 1x58_A Hypothetical protein 49 20.0 73 0.0025 23.6 2.9 24 167-191 12-35 (62)
No 1
>2qmc_A GGT, gamma-glutamyltranspeptidase; NTN-hydrolase, transferase; HET: GTB; 1.55A {Helicobacter pylori} PDB: 2qm6_A* 3fnm_A* 2nqo_A
Probab=100.00 E-value=1.8e-99 Score=764.48 Aligned_cols=333 Identities=32% Similarity=0.515 Sum_probs=315.1
Q ss_pred ccccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceeEEeecCCCcEEEEEeecCcccC
Q 015611 66 DVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAPQA 145 (403)
Q Consensus 66 ~~~~~~~gaVas~~~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGgg~~lv~~~~~~~~~~id~r~~aP~~ 145 (403)
+...+.+|||+|+||+||++|++||++||||||||||+++|++||+|++||||||+|||||+ +++++++|||||+||.+
T Consensus 29 p~~~~~~g~Vas~~plAs~aG~~IL~~GGNAvDAAVAaa~~L~VveP~~sGiGGggF~li~~-~~~~~~~id~re~AP~~ 107 (377)
T 2qmc_A 29 PIKNTKVGLALSSHPLASEIGQKVLEEGGNAIDAAVAIGFALAVVHPAAGNIGGGGFAVIHL-ANGENVALDFREKAPLK 107 (377)
T ss_dssp -CEESSSEEEECSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEEC-TTSCEEEEEECCBCCTT
T ss_pred CccccCceEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEe-CCCCEEEEEeeccCccc
Confidence 34468899999999999999999999999999999999999999999999999999999997 78999999999999999
Q ss_pred CChhhhccC-----ccccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHhc
Q 015611 146 ASQDMYEND-----TEAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVILN 220 (403)
Q Consensus 146 a~~~~~~~~-----~~~~~~G~~sv~VPG~l~Gl~~a~~~~G~L~w~~ll~PAI~LA~~Gf~V~~~la~~l~~~~~~i~~ 220 (403)
++++||.+. +..+..|+++|+|||+++||+++|+|||+|||++||+|||+|||+||+|++.++..++...+.+.+
T Consensus 108 at~d~~~~~~g~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~ 187 (377)
T 2qmc_A 108 ATKNMFLDKQGNVVPKLSEDGYLAAGVPGTVAGMEAMLKKYGTKKLSQLIDPAIKLAENGYAISQRQAETLKEARERFLK 187 (377)
T ss_dssp CCTTTTBCTTSCBCTTTTTSSGGGCCBCCHHHHHHHHHHHHCCSCHHHHTHHHHHHHHHCEECCHHHHHHHHHHHHHHTT
T ss_pred CCHHHHhhccCCcCCccccCCCcccccchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHhc
Confidence 999999753 234578999999999999999999999999999999999999999999999999999988888999
Q ss_pred Cccchhcccc-CCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceeecCEEE
Q 015611 221 DRGLRQVFAP-NGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMSA 299 (403)
Q Consensus 221 ~~~~~~~f~~-~G~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~ 299 (403)
+|+++++|.+ +|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||.+||++|+++|++||++
T Consensus 188 ~p~~~~~f~~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~~ 267 (377)
T 2qmc_A 188 YSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVAELIEKDMKKNGGIITKEDLASYNVKWRKPVVG 267 (377)
T ss_dssp CHHHHHHHEETTTEECCTTCEECCHHHHHHHHHHHHHTTHHHHSHHHHHHHHHHHHHTTCCCCHHHHHTCCCEEECCEEE
T ss_pred ChhHHhhccCCCCccCCCCCEeeCHHHHHHHHHHHHhCcHhhhCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCCeEE
Confidence 9999999986 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCeEEEecCCCCChHHHHHHHHHHHhcCCCCC-CCCchhHHHHHHHHHHHHHHhHh-hCCCCCCCCCchhHhhhCCHH
Q 015611 300 NAMGYTISGMPPPSSGTVGMSMILNIFDSYGSSD-SAKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEMLSPS 377 (403)
Q Consensus 300 ~~~g~~v~~~ppPssG~~~L~~~Lnile~~~~~~-~~~~~~~~h~lvEa~k~a~a~R~-~lGDp~f~~v~~~~~~lls~~ 377 (403)
+|+||+||++||||||+++++++|||||+|++.. ..++++++|+++||+|+||+||. ++|||+|++++ +++|||++
T Consensus 268 ~yrg~~v~~~pPPssGG~~~l~~L~iLe~~~l~~~~~~s~~~~H~~~EA~k~AfadR~~~lgDP~f~~vp--~~~LLs~~ 345 (377)
T 2qmc_A 268 SYRGYKIISMSPPSSGGTHLIQILNVMENADLSALGYGASKNIHIAAEAMRQAYADRSVYMGDADFVSVP--VDKLINKA 345 (377)
T ss_dssp EETTEEEEECCTTBSHHHHHHHHHHHHTTSCHHHHCTTCHHHHHHHHHHHHHHHHHHHHHCSCTTTSCCC--HHHHTCHH
T ss_pred EeCCeEEEeCCCCCchHHHHHHHHHHHhcCCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCccccccc--HHHhCCHH
Confidence 9999999999999999887889999999998754 34678999999999999999997 69999999987 89999999
Q ss_pred HHHHHHhhCCCCCCCCCCCCCCCC
Q 015611 378 YAEQIQLKIFDNTTFPPDYYMYRY 401 (403)
Q Consensus 378 ~a~~~r~~I~~~~t~~~~~Y~~~~ 401 (403)
|++++|++|+++++.++++|++.+
T Consensus 346 ya~~~~~~I~~~~a~~~~~~~~~~ 369 (377)
T 2qmc_A 346 YAKKIFDTIQPDTVTPSSQIKPGM 369 (377)
T ss_dssp HHHHHHHTCBTTBCCCGGGCCGGG
T ss_pred HHHHHHHhCCcccCCChhhcCCCC
Confidence 999999999999999988998755
No 2
>2dg5_A Gamma-glutamyltranspeptidase; gamma-glutamyltransferase, GGT, gamma-GT, glutathione; HET: GLU; 1.60A {Escherichia coli K12} SCOP: d.153.1.6 PDB: 2dbu_A 2dbw_A* 2dbx_A* 2e0x_A 2e0y_A 2z8i_A* 2z8j_A* 2z8k_A*
Probab=100.00 E-value=9.6e-99 Score=757.70 Aligned_cols=334 Identities=35% Similarity=0.572 Sum_probs=314.0
Q ss_pred CCccccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceeEEeecCCCcEEEEEeecCcc
Q 015611 64 YGDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAP 143 (403)
Q Consensus 64 ~~~~~~~~~gaVas~~~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGgg~~lv~~~~~~~~~~id~r~~aP 143 (403)
+|..+.+.+|||+|+||+||++|++||++||||||||||+++|++||+||+||||||+||+||++ ++++++|||||+||
T Consensus 16 ~r~~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~~GiGGggF~li~~~-~~~~~~id~re~AP 94 (366)
T 2dg5_A 16 VFHPVRAKQGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRSK-NGNTTAIDFREMAP 94 (366)
T ss_dssp SSCCEEESSCEEEESCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEECT-TSCEEEEEECCBCC
T ss_pred CCCccccCceEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccccCCCCCCeEEEEEcC-CCCEEEEeeeecCc
Confidence 56667889999999999999999999999999999999999999999999999999999999965 78999999999999
Q ss_pred cCCChhhhccC-----ccccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHH
Q 015611 144 QAASQDMYEND-----TEAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVI 218 (403)
Q Consensus 144 ~~a~~~~~~~~-----~~~~~~G~~sv~VPG~l~Gl~~a~~~~G~L~w~~ll~PAI~LA~~Gf~V~~~la~~l~~~~~~i 218 (403)
.+++++||.++ +..+..|+++|+|||+++||+++|+|||+|||++||+|||+|||+||+|++.++..++...+.+
T Consensus 95 ~~a~~~~~~~~~g~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l 174 (366)
T 2dg5_A 95 AKATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEV 174 (366)
T ss_dssp TTCCTTTTBCTTSCBCHHHHHTSGGGCCBCCHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTGGGT
T ss_pred ccCCHHHHhhccCCcCCCccCCCCcccccchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHH
Confidence 99999999754 2345689999999999999999999999999999999999999999999999999998877778
Q ss_pred hcCccchhccc-cCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceeecCE
Q 015611 219 LNDRGLRQVFA-PNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAM 297 (403)
Q Consensus 219 ~~~~~~~~~f~-~~G~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl 297 (403)
.++|+++++|+ ++|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||.+||++|+++|++||
T Consensus 175 ~~~~~~~~~f~~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl 254 (366)
T 2dg5_A 175 LPNHENSKAIFWKEGEPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPI 254 (366)
T ss_dssp GGGSHHHHHHHEETTEECCTTCEECCHHHHHHHHHHHHHCTHHHHTSHHHHHHHHHHHHTTCCCCHHHHHHCCCEEECCE
T ss_pred hcCchHHHHhcCCCCeECCCCCEeeCHHHHHHHHHHHHhCchhccCCHHHHHHHHHHHHcCCCCCHHHHhhCCCceeCCe
Confidence 88888888884 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCCeEEEecCCCCChHHHHHHHHHHHhcCCCCC-CCCchhHHHHHHHHHHHHHHhHh-hCCCCCCCCCchhHhhhCC
Q 015611 298 SANAMGYTISGMPPPSSGTVGMSMILNIFDSYGSSD-SAKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEMLS 375 (403)
Q Consensus 298 ~~~~~g~~v~~~ppPssG~~~L~~~Lnile~~~~~~-~~~~~~~~h~lvEa~k~a~a~R~-~lGDp~f~~v~~~~~~lls 375 (403)
+++|+||+||++|||||||++++++|||||+|++.. ..++++++|+++||+|+||+||. ++|||+|++++ +++|||
T Consensus 255 ~~~yrg~~v~~~pPpssgG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~Lls 332 (366)
T 2dg5_A 255 SGDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDPDFVKVP--WQALTN 332 (366)
T ss_dssp EEEETTEEEEECCTTBSHHHHHHHHHHHHTTSCHHHHCTTCHHHHHHHHHHHHHHHHHHHHHCSCTTTSCCC--HHHHTC
T ss_pred EEEeCCeEEEECCCCchHHHHHHHHHHhccccCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCcccccch--HHHhCC
Confidence 999999999999999998887889999999998754 35678999999999999999997 69999999987 799999
Q ss_pred HHHHHHHHhhCCCCCCCCCCCCCCC
Q 015611 376 PSYAEQIQLKIFDNTTFPPDYYMYR 400 (403)
Q Consensus 376 ~~~a~~~r~~I~~~~t~~~~~Y~~~ 400 (403)
++|+++++++|+++++.++.+|.+.
T Consensus 333 ~~ya~~~~~~I~~~~~~~~~~~~~~ 357 (366)
T 2dg5_A 333 KAYAKSIADQIDINKAKPSSEIRPG 357 (366)
T ss_dssp HHHHHHHHTTCBTTBCCCGGGCCCC
T ss_pred HHHHHHHHHhcCcccCCChhhcCCC
Confidence 9999999999999999988888764
No 3
>2v36_A Gamma-glutamyltranspeptidase large chain; transferase, glutathione biosynthesis, gamma-glutamyl transferase, acyltransferase, zymogen; 1.85A {Bacillus subtilis} PDB: 3a75_A*
Probab=100.00 E-value=7.1e-98 Score=754.06 Aligned_cols=331 Identities=34% Similarity=0.555 Sum_probs=309.4
Q ss_pred CccccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceeEEeecCCCcEEEEEeecCccc
Q 015611 65 GDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAPQ 144 (403)
Q Consensus 65 ~~~~~~~~gaVas~~~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGgg~~lv~~~~~~~~~~id~r~~aP~ 144 (403)
++.+.+.+|||+|+||+||++|++||++||||||||||+++|++||+||+||||||+|||||+++++++++|||||+||.
T Consensus 13 ~~~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~sGiGGggf~li~~~~~~~~~~id~re~AP~ 92 (376)
T 2v36_A 13 KQVDVGKDGMVATAHPLASEIGADVLKKGGNAIDAAVAIQFALNVTEPMMSGIGGGGFMMVYDGKTKDTTIIDSRERAPA 92 (376)
T ss_dssp CSBC-CCSEEEEBSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSTTTCSTTSEEEEEEECTTTCCEEEEECCCBCCT
T ss_pred CCccccCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEECCCCcEEEEEeeccCcc
Confidence 44457899999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred CCChhhhccC--ccc----cccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHH
Q 015611 145 AASQDMYEND--TEA----KYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVI 218 (403)
Q Consensus 145 ~a~~~~~~~~--~~~----~~~G~~sv~VPG~l~Gl~~a~~~~G~L~w~~ll~PAI~LA~~Gf~V~~~la~~l~~~~~~i 218 (403)
+++++||.+. ... +..|+++|+|||+++||+++|+|||+|||++||+|||+|||+||+|++.++..++...+.+
T Consensus 93 ~a~~~~~~~~~g~~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l 172 (376)
T 2v36_A 93 GATPDMFLDENGKAIPFSERVTKGTAVGVPGTLKGLEEALDKWGTRSMKQLITPSIKLAEKGFPIDSVLAEAISDYQEKL 172 (376)
T ss_dssp TCCTTTTBCSSSCBCCHHHHTTSGGGCCBCCHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTHHHH
T ss_pred cCCHhHhhhccCCcCCcccccCCCccccCchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHh
Confidence 9999999743 122 3689999999999999999999999999999999999999999999999999999888888
Q ss_pred hcCccchhccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceeecCEE
Q 015611 219 LNDRGLRQVFAPNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMS 298 (403)
Q Consensus 219 ~~~~~~~~~f~~~G~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~ 298 (403)
.+ |+++++|.++|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||.+||++|+++|++||+
T Consensus 173 ~~-~~~~~~f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~ 251 (376)
T 2v36_A 173 SR-TAAKDVFLPNGEPLKEGDTLIQKDLAKTFKLIRSKGTDAFYKGKFAKTLSDTVQDFGGSMTEKDLENYDITIDEPIW 251 (376)
T ss_dssp TT-STTHHHHSTTSSCCCTTCEECCHHHHHHHHHHHHHCTHHHHSHHHHHHHHHHHHHTTCCCCHHHHHHCCCEEECCEE
T ss_pred cC-hhHHHHhccCCccCCCCCEEECHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCceE
Confidence 88 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCeEEEecCCCCChHHHHHHHHHHHhcCCCCC-CCCchhHHHHHHHHHHHHHHhHh-hCCCCCCCCCchhHhhhCCH
Q 015611 299 ANAMGYTISGMPPPSSGTVGMSMILNIFDSYGSSD-SAKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEMLSP 376 (403)
Q Consensus 299 ~~~~g~~v~~~ppPssG~~~L~~~Lnile~~~~~~-~~~~~~~~h~lvEa~k~a~a~R~-~lGDp~f~~v~~~~~~lls~ 376 (403)
++|+||+||++|||||||++++++|||||+|++.. ..++++++|+++||+|+||++|. ++|||+|++++ +++|||+
T Consensus 252 ~~yrg~~v~~~pPPssGG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~Lls~ 329 (376)
T 2v36_A 252 GDYQGYQIATTPPPSSGGIFLLQMPKILDHFNLSQYDVRSWEKYQLLAETMHLSYADRASYAGDPEFVNVP--LKGLLHP 329 (376)
T ss_dssp EEETTEEEEECCTTBSHHHHHHHHHHHHHTTCCC--CTTCHHHHHHHHHHHHHHHHHHHHHCSCTTTSCCC--HHHHHCH
T ss_pred EEeCCeEEEECCCCCcHHHHHHHHHHHHhcCCccccCCCcHHHHHHHHHHHHHHHHHHHHhcCCcccccCC--HHHhcCH
Confidence 99999999999999999888889999999999875 35678999999999999999997 69999999987 8999999
Q ss_pred HHHHHHHhhCCCCCCCCCCCCCCC
Q 015611 377 SYAEQIQLKIFDNTTFPPDYYMYR 400 (403)
Q Consensus 377 ~~a~~~r~~I~~~~t~~~~~Y~~~ 400 (403)
+|+++++++|++ +.++.+|.+.
T Consensus 330 ~y~~~~~~~I~~--~~~~~~~~~~ 351 (376)
T 2v36_A 330 DYIKERQQLINL--DQVNKKPKAG 351 (376)
T ss_dssp HHHHHHHHTCBT--TBCCSSCCCC
T ss_pred HHHHHHHHhccc--cccccccCCC
Confidence 999999999997 5566667653
No 4
>2e0w_A Gamma-glutamyltranspeptidase; NTN hydrolase, precursor, gamma-GTP, post-translational PROC maturation, transferase; 2.55A {Escherichia coli K12} SCOP: d.153.1.6
Probab=100.00 E-value=3.7e-95 Score=765.51 Aligned_cols=334 Identities=35% Similarity=0.571 Sum_probs=297.8
Q ss_pred CCccccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceeEEeecCCCcEEEEEeecCcc
Q 015611 64 YGDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAP 143 (403)
Q Consensus 64 ~~~~~~~~~gaVas~~~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGgg~~lv~~~~~~~~~~id~r~~aP 143 (403)
.++.+.+.+|||+|+||+||++|++||++||||||||||+++|++||+||+||||||+|||||+ +++++++|||||+||
T Consensus 16 ~~~~v~~~~g~Vas~~plAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~sGiGGggf~lv~~-~~~~~~~id~re~AP 94 (556)
T 2e0w_A 16 VFHPVRAKQGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRS-KNGNTTAIDFREMAP 94 (556)
T ss_dssp SSCCEEESSCEEEESSHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEEC-TTSCEEEEEECCBCC
T ss_pred ccCceeccceEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhcccccCCCCCeEEEEEe-CCCCEEEEEeeccCc
Confidence 3455678999999999999999999999999999999999999999999999999999999997 789999999999999
Q ss_pred cCCChhhhccC-----ccccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHH
Q 015611 144 QAASQDMYEND-----TEAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVI 218 (403)
Q Consensus 144 ~~a~~~~~~~~-----~~~~~~G~~sv~VPG~l~Gl~~a~~~~G~L~w~~ll~PAI~LA~~Gf~V~~~la~~l~~~~~~i 218 (403)
.+++++||.+. +..+..|+++|+|||+++||+++|+|||+|||++||+|||+|||+||+|++.++..++...+.+
T Consensus 95 ~~at~d~~~~~~g~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~V~~~la~~~~~~~~~l 174 (556)
T 2e0w_A 95 AKATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEV 174 (556)
T ss_dssp CC--------------------CCCCCCBCCHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTHHHH
T ss_pred ccCCHhHHhhccCCcCCccccCCccccccchhHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHhHHHh
Confidence 99999999653 2345789999999999999999999999999999999999999999999999999999888889
Q ss_pred hcCccchhccc-cCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceeecCE
Q 015611 219 LNDRGLRQVFA-PNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAM 297 (403)
Q Consensus 219 ~~~~~~~~~f~-~~G~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl 297 (403)
.++|+++++|. ++|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||.+||++|+++|++||
T Consensus 175 ~~~p~~~~~f~~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl 254 (556)
T 2e0w_A 175 LPNHENSKAIFWKEGEPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPI 254 (556)
T ss_dssp STTSHHHHHHHEETTEECCTTCEECCHHHHHHHHHHHHHCTHHHHHSHHHHHHHHHHHHSSCCCCHHHHHTCCCEEECCE
T ss_pred hcCchHHHhccCCCCccCCCCCEeeCHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHcCCCcCHHHHhhCCcceeCce
Confidence 99999999997 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCCeEEEecCCCCChHHHHHHHHHHHhcCCCCC-CCCchhHHHHHHHHHHHHHHhHh-hCCCCCCCCCchhHhhhCC
Q 015611 298 SANAMGYTISGMPPPSSGTVGMSMILNIFDSYGSSD-SAKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEMLS 375 (403)
Q Consensus 298 ~~~~~g~~v~~~ppPssG~~~L~~~Lnile~~~~~~-~~~~~~~~h~lvEa~k~a~a~R~-~lGDp~f~~v~~~~~~lls 375 (403)
+++|+||+||++||||||++.++++|||||+|++.. ..++++++|+++||+|+||+||. ++|||+|++++ +++|||
T Consensus 255 ~~~yrg~~v~~~pPpssGG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~Lls 332 (556)
T 2e0w_A 255 SGDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDPDFVKVP--WQALTN 332 (556)
T ss_dssp EEEETTEEEEECCTTBSSHHHHHHHHHHHHTSCSSSSCTTCHHHHHHHHHHHHHHHHHHGGGC-------CC--GGGGGC
T ss_pred EEEeCCeEEEECCCCCcHHHHHHHHHHHHhcCCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCccccccc--HHHhcC
Confidence 999999999999999999887889999999999875 35678999999999999999997 69999999887 899999
Q ss_pred HHHHHHHHhhCCCCCCCCCCCCCCC
Q 015611 376 PSYAEQIQLKIFDNTTFPPDYYMYR 400 (403)
Q Consensus 376 ~~~a~~~r~~I~~~~t~~~~~Y~~~ 400 (403)
++|++++|++|+++++.++.+|++.
T Consensus 333 ~~ya~~~~~~I~~~~a~~~~~~~~~ 357 (556)
T 2e0w_A 333 KAYAKSIADQIDINKAKPSSEIRPG 357 (556)
T ss_dssp HHHHHHHHHHCCSSCCCCHHHHSCC
T ss_pred HHHHHHHHHhcCccccCCccccCCC
Confidence 9999999999999999887776654
No 5
>2nlz_A Cephalosporin acylase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.70A {Bacillus halodurans} SCOP: d.153.1.6
Probab=100.00 E-value=2.7e-93 Score=750.14 Aligned_cols=328 Identities=27% Similarity=0.421 Sum_probs=308.8
Q ss_pred CCccccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceeEEeecCCCcEEEEEeecCcc
Q 015611 64 YGDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAP 143 (403)
Q Consensus 64 ~~~~~~~~~gaVas~~~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGgg~~lv~~~~~~~~~~id~r~~aP 143 (403)
+|+.+.+.+|||+|+||+||++|++||++||||||||||+++|++||+|++||||||+|||||++ + ++++|||||+||
T Consensus 15 ~r~~v~~~~g~Vas~~plAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~sGiGGggf~lv~~~-~-~~~~id~re~AP 92 (547)
T 2nlz_A 15 RRNVVYAKNGMVATSQPLAAQAGLDILKAGGNAIDAAIATATALTVLEPTSNGIGSDAFALVWTK-G-KLHGLNGSGRAP 92 (547)
T ss_dssp CCCCEEESSEEEEESSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTSCCTBCEEEEEEEET-T-EEEEEEECCCCC
T ss_pred CCCccccCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCceEEEEEEC-C-ceEEEecccCCc
Confidence 45667889999999999999999999999999999999999999999999999999999999975 4 899999999999
Q ss_pred cCCChhhhccCc---cccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHhc
Q 015611 144 QAASQDMYENDT---EAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVILN 220 (403)
Q Consensus 144 ~~a~~~~~~~~~---~~~~~G~~sv~VPG~l~Gl~~a~~~~G~L~w~~ll~PAI~LA~~Gf~V~~~la~~l~~~~~~i~~ 220 (403)
.+++++||.++. ..+..|+++|+|||+++||+++|+|||||||++||+|||+|||+||+|++.++..++...+.+.+
T Consensus 93 ~~a~~~~~~~~g~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~ 172 (547)
T 2nlz_A 93 MSLTMEAVKAKGYEQELPPYGVIPVTVPGAPGAWAELAKMYGNLPLAASLAPAIRYAEEGYPVTPTLAKYWKAAYDRVKT 172 (547)
T ss_dssp TTCCHHHHHTTTCCSSCCSSSSTTCCCCCHHHHHHHHHHHHCSSCHHHHTHHHHHHHHHCEECCHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHhhcCCCccCCCCCCcccccchHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHhc
Confidence 999999997542 45778999999999999999999999999999999999999999999999999999988888888
Q ss_pred Ccc------chhccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceee
Q 015611 221 DRG------LRQVFAPNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVM 294 (403)
Q Consensus 221 ~~~------~~~~f~~~G~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~ 294 (403)
+|+ ++++|.++|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||.+||++|+++|+
T Consensus 173 ~p~~~~~~~~~~~f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~ 252 (547)
T 2nlz_A 173 EWTDDVYQPWFDTFAPKGRAPRVGEVWRSQGHADTLRSIAESNGESFYRGELADQIHAFFDKHGGYLTKEDLACYRPEWV 252 (547)
T ss_dssp HCCSSTTHHHHHHHCTTSSCCCTTCEECCHHHHHHHHHHHTTTTHHHHHSHHHHHHHHHHHHTTCCCCHHHHHTCCCEEE
T ss_pred CCcccchhhHHHHcccCCccCCCCCEecCHHHHHHHHHHHHhCchhhcCCHHHHHHHHHHHhcCCCCCHHHHhhCCceee
Confidence 898 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEeeCCeEEEecCCCCChHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHhHh-hCCCCCCCCCchhHhhh
Q 015611 295 DAMSANAMGYTISGMPPPSSGTVGMSMILNIFDSYGSSDSAKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEM 373 (403)
Q Consensus 295 ~pl~~~~~g~~v~~~ppPssG~~~L~~~Lnile~~~~~~~~~~~~~~h~lvEa~k~a~a~R~-~lGDp~f~~v~~~~~~l 373 (403)
+||+++|+||+||++||||||.+ ++++|||||+|++.. .++++++|+++||+|+||+||. ++|||+|++++ +++|
T Consensus 253 ~Pl~~~yrg~~v~~~pPps~G~~-~l~~L~iLe~~~l~~-~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~L 328 (547)
T 2nlz_A 253 EPISIDYRGYRVWEIPPNGQGLV-ALEALNIVKGFEFYH-KDTVDTYHKQIEAMKLAFVDGMKYVTEPSDMSVS--VEQL 328 (547)
T ss_dssp CCEEEEETTEEEEECCTTBTTHH-HHHHHHHHTTSCCSC-SSSHHHHHHHHHHHHHHHHHHHHHCSSGGGCSSC--HHHH
T ss_pred CCeEEEeCCceEEECCCCcHHHH-HHHHHHHHhcCCCCC-CCcHHHHHHHHHHHHHHHHHHHHhcCCccccccc--HHHh
Confidence 99999999999999999999966 559999999999876 6688999999999999999997 89999999987 8999
Q ss_pred CCHHHHHHHHhhCCCCCCCCCCCCC
Q 015611 374 LSPSYAEQIQLKIFDNTTFPPDYYM 398 (403)
Q Consensus 374 ls~~~a~~~r~~I~~~~t~~~~~Y~ 398 (403)
||++|+++++++|+++ +.++.++.
T Consensus 329 ls~~ya~~~~~~I~~~-a~~~~~~~ 352 (547)
T 2nlz_A 329 LSDEYATERRKEIGEQ-ALTPEPGT 352 (547)
T ss_dssp TCHHHHHHHHTTCCSS-CCCCCCCC
T ss_pred cCHHHHHHHHHhcccc-cCCCCCCC
Confidence 9999999999999987 66655543
No 6
>3g9k_L Capsule biosynthesis protein CAPD; CAPD protein, the great lakes regional C excellence, GLRCE, capsule biogenesis/degradation; HET: GLU; 1.79A {Bacillus anthracis} PDB: 3ga9_L*
Probab=100.00 E-value=7e-93 Score=702.71 Aligned_cols=299 Identities=31% Similarity=0.475 Sum_probs=267.0
Q ss_pred cccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceeEEeecCCCcEEEEEeecCcccCC
Q 015611 67 VVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAPQAA 146 (403)
Q Consensus 67 ~~~~~~gaVas~~~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGgg~~lv~~~~~~~~~~id~r~~aP~~a 146 (403)
....++|||+|+||+||++|++||++||||||||||+++|++||+||+||||||+||+||+++ +++ +|||||+||..+
T Consensus 15 ~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~sGiGGggf~li~~~~-~~~-~id~r~~AP~~a 92 (323)
T 3g9k_L 15 MGDKGTYGVSASHPLAVEEGMKVLKNGGSAVDAAIVVSYVLGVVELHASGIGGGGGMLIISKD-KET-FIDYRETTPYFT 92 (323)
T ss_dssp ---CCCCEEEESSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCTTSEEEEEEECSS-CEE-EEECCCBCCC--
T ss_pred CCCCCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEeCC-CCE-EEEeeccCcHhH
Confidence 345689999999999999999999999999999999999999999999999999999999765 888 999999999977
Q ss_pred ChhhhccCccccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHhcCccchh
Q 015611 147 SQDMYENDTEAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVILNDRGLRQ 226 (403)
Q Consensus 147 ~~~~~~~~~~~~~~G~~sv~VPG~l~Gl~~a~~~~G~L~w~~ll~PAI~LA~~Gf~V~~~la~~l~~~~~~i~~~~~~~~ 226 (403)
..|.++|+|||+++||+++|+|||+|||++||+|||+|||+||+|++.++..++...+.+..+|+++
T Consensus 93 ------------~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~~~~~~- 159 (323)
T 3g9k_L 93 ------------GNQKPHIGVPGFVAGMEYIHDNYGSLPMGELLQPAINYAEKGFKVDDSLTMRLDLAKPRIYSDKLSI- 159 (323)
T ss_dssp ----------------CCCCBCCHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHCCTTCGG-
T ss_pred ------------hcCCCcccCchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHhcCCccc-
Confidence 2477999999999999999999999999999999999999999999999999999888898899988
Q ss_pred ccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceeecCEEEeeCCeEE
Q 015611 227 VFAPNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMSANAMGYTI 306 (403)
Q Consensus 227 ~f~~~G~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~~~~g~~v 306 (403)
|.++|+++++||+++||+||+||++||++|+++||+|+||++|+++ |+||.+||++|+++|++||+++|+||+|
T Consensus 160 -f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~-----G~lt~~DLa~y~~~~~~Pl~~~yrg~~v 233 (323)
T 3g9k_L 160 -FYPNGEPIETGETLIQTDLARTLKKIQKEGAKGFYEGGVARAISKT-----AKISLEDIKGYKVEVRKPVKGNYMGYDV 233 (323)
T ss_dssp -GSGGGSCCCTTCEECCHHHHHHHHHHHHHTTHHHHSHHHHHHHHHH-----HTCCHHHHHTCCCEEECCEEEEETTEEE
T ss_pred -ccCCCCCCCCCCEEECHHHHHHHHHHHHhCcccccCCHHHHHHHHc-----CCCCHHHHhhCCceEeCCEEEEeCCeEE
Confidence 7789999999999999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred EecCCCCChHHHHHHHHHHHhcCCCCC-CCCchhHHHHHHHHHHHHHHhHh-hCCCCCCCCCchhHhhhCCHHHHHHHHh
Q 015611 307 SGMPPPSSGTVGMSMILNIFDSYGSSD-SAKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEMLSPSYAEQIQL 384 (403)
Q Consensus 307 ~~~ppPssG~~~L~~~Lnile~~~~~~-~~~~~~~~h~lvEa~k~a~a~R~-~lGDp~f~~v~~~~~~lls~~~a~~~r~ 384 (403)
|++||||||.+++ ++|||||+|++.. ..++++++|+++||+|+||++|. ++|||+|+++| +++|||++|++++|+
T Consensus 234 ~~~pPpssG~~~l-~~L~ile~~~~~~~~~~~~~~~H~~~EA~k~A~adR~~~lgDP~f~~vp--~~~Lls~~ya~~~~~ 310 (323)
T 3g9k_L 234 YTAPPPFSGVTLL-QMLKLAEKKEVYKDVDHTATYMSKMEEISRIAYQDRKKNLGDPNYVNMD--PNKMVSDKYISTMKN 310 (323)
T ss_dssp EECCTTSCHHHHH-HHHHHHHHTTGGGGTTSHHHHHHHHHHHHHHHHHHHHHTTCC------C--HHHHTSHHHHHTCC-
T ss_pred EeCCCCCHHHHHH-HHHHHHhcCCCccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcccccCC--HHHhCCHHHHHHHHH
Confidence 9999999977655 9999999999865 35678999999999999999997 69999999987 899999999999999
Q ss_pred hCCCC
Q 015611 385 KIFDN 389 (403)
Q Consensus 385 ~I~~~ 389 (403)
+|+|.
T Consensus 311 ~I~d~ 315 (323)
T 3g9k_L 311 ENGDA 315 (323)
T ss_dssp -----
T ss_pred hcCcc
Confidence 99864
No 7
>2i3o_A Gamma-glutamyltransferase related protein; structural genomics, PSI, protein structure initiative; 2.03A {Thermoplasma acidophilum} SCOP: d.153.1.6
Probab=100.00 E-value=2.7e-90 Score=723.40 Aligned_cols=311 Identities=24% Similarity=0.399 Sum_probs=286.0
Q ss_pred CCccccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceeEEeecCCCcEEEEEeecCcc
Q 015611 64 YGDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAP 143 (403)
Q Consensus 64 ~~~~~~~~~gaVas~~~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGgg~~lv~~~~~~~~~~id~r~~aP 143 (403)
.|+.+.+.+|||+|+||+||++|++||++||||||||||+++|++||+||+||||||+||+||++ ++++++|||||+||
T Consensus 4 ~r~~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~~GiGGggf~lv~~~-~~~~~~id~r~~AP 82 (516)
T 2i3o_A 4 SRPNALSQRSVIASSSELASLAGRDILKRGGNIFDAALAVSAMLCVTQNNLCGLGGDLFALIRDE-NGQIMDLNGSGQAS 82 (516)
T ss_dssp SSCCEEESSEEEEESBHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSTTSCCTTSEEEEEEECT-TCCEEEEEECCCBC
T ss_pred CCCccccCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCceEEEEEeC-CCcEEEEECCcCCc
Confidence 45667889999999999999999999999999999999999999999999999999999999976 78999999999999
Q ss_pred cCCChhhhccC--ccccccCCCc-cccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHhc
Q 015611 144 QAASQDMYEND--TEAKYTGALS-IGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVILN 220 (403)
Q Consensus 144 ~~a~~~~~~~~--~~~~~~G~~s-v~VPG~l~Gl~~a~~~~G~L~w~~ll~PAI~LA~~Gf~V~~~la~~l~~~~~~i~~ 220 (403)
.+++++||.++ ...+..|+++ |+|||+++||+++|+|||+|||++||+|||+|||+||+|++.++..++...+.+.+
T Consensus 83 ~~a~~~~~~~~g~~~~~~~G~~a~v~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~ 162 (516)
T 2i3o_A 83 RAVSIDYYESMGLTKIPERGPYAAITVPGIAGSWDEIFRKFATMDIADILEPAIRTASAGFPITQNYSDSIARSAPVIGQ 162 (516)
T ss_dssp TTCCHHHHHTTTCSSCCSSSTTTCCBCCCHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHTT
T ss_pred ccCCHHHHhhcCCCcCCCCCCcccCcCchHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHhhc
Confidence 99999999654 2467799999 99999999999999999999999999999999999999999999999988888999
Q ss_pred CccchhccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCccCchHHHHHHHHHHhcCCccCHhhhccCCceeecCEEEe
Q 015611 221 DRGLRQVFAPNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMSAN 300 (403)
Q Consensus 221 ~~~~~~~f~~~G~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~~ 300 (403)
+|+++++|.++|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||.+||++|+++|++||+++
T Consensus 163 ~~~~~~~f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~~~ 242 (516)
T 2i3o_A 163 YRGWSSIFMPNGSVPVAGEILKQPDLAESFRLMSEEGFRSFYDGSLADIIIAGLEGTGSPLSDRDLRVYRPLIGKPVFTD 242 (516)
T ss_dssp CHHHHHHHSTTSSCCCTTCEECCHHHHHHHHHHHHHCTTHHHHSHHHHHHHHTTTTTCCCCCHHHHHHCCCEEECCEEEE
T ss_pred ChhHHhhhccCCccCCCCCEecCHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCeEEEecCCCCChHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHhHhhCCCCCCCCCchhHhhhCCHHHHH
Q 015611 301 AMGYTISGMPPPSSGTVGMSMILNIFDSYGSSDSAKGNLGLHRLIEALKHMFAVRMTLGDPKFVNNTNTLSEMLSPSYAE 380 (403)
Q Consensus 301 ~~g~~v~~~ppPssG~~~L~~~Lnile~~~~~~~~~~~~~~h~lvEa~k~a~a~R~~lGDp~f~~v~~~~~~lls~~~a~ 380 (403)
|+||+||++||||||.+ ++++|||||+|++....++++++|+++||+|+||+||.++|||+|++++ +++| +|++
T Consensus 243 yrg~~v~~~pPps~G~~-~l~~L~iLe~~~~~~~~~~~~~~H~~~EA~k~A~adR~~lgDp~f~~vp--~~~L---~y~~ 316 (516)
T 2i3o_A 243 LDEFRIYETSPNSQGIT-VIEWIRGMESHGYDSRTMWEAKIEDIFETMEEAYDKRRKITDPSYMNIA--QHDS---ANGK 316 (516)
T ss_dssp ETTEEEEECCTTBTTHH-HHHHHHHHHHTTCCTTTGGGCCHHHHHHHHHHHHHHHTTCCCGGGTC---------------
T ss_pred eCCeEEEECCCCcHHHH-HHHHHHhhhcCCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCccccccc--hHHH---HHHH
Confidence 99999999999999966 5599999999998755567889999999999999999999999999886 6777 8888
Q ss_pred H
Q 015611 381 Q 381 (403)
Q Consensus 381 ~ 381 (403)
+
T Consensus 317 ~ 317 (516)
T 2i3o_A 317 K 317 (516)
T ss_dssp -
T ss_pred h
Confidence 7
No 8
>1apy_A Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_A*
Probab=90.53 E-value=0.27 Score=43.70 Aligned_cols=42 Identities=24% Similarity=0.267 Sum_probs=31.7
Q ss_pred CChhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCC--CCCCCCCC
Q 015611 78 DDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNP--MASGIGGG 120 (403)
Q Consensus 78 ~~~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P--~~sGiGGg 120 (403)
.-..|.++|.++|++||+|.||.+++.-.+=- .| +.+|.||-
T Consensus 12 ~~~~a~~~g~~~L~~G~sAlDAV~~av~~lEd-~p~~fNAG~Gs~ 55 (162)
T 1apy_A 12 PFKNATEAAWRALASGGSALDAVESGCAMCER-EQCDGSVGFGGS 55 (162)
T ss_dssp SCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-HTGGGSSSSSSC
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh-CCCCcCcCCCCC
Confidence 45579999999999999999999988333221 24 67787765
No 9
>1k2x_A Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_A* 1t3m_A 2zal_A
Probab=87.52 E-value=0.71 Score=41.56 Aligned_cols=41 Identities=24% Similarity=0.296 Sum_probs=30.1
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCC
Q 015611 80 GHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGG 120 (403)
Q Consensus 80 ~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGg 120 (403)
..|.+.|.++|++||+|.||.+++.-++=--.-+.+|.|+-
T Consensus 32 ~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~ 72 (177)
T 1k2x_A 32 SAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGAV 72 (177)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSSSSTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCCcCCcC
Confidence 45678899999999999999998855543333345666654
No 10
>2gez_A L-asparaginase alpha subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=86.69 E-value=0.82 Score=41.78 Aligned_cols=40 Identities=25% Similarity=0.420 Sum_probs=29.6
Q ss_pred hHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCC
Q 015611 81 HCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGG 120 (403)
Q Consensus 81 ~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGg 120 (403)
.|.+.|.++|++||+|.||.+++.-++=--.-+.+|.|+-
T Consensus 36 ~a~~~g~~~L~~G~sAlDAV~~av~~lEd~p~fNaG~Gs~ 75 (195)
T 2gez_A 36 HCLQIGVEALKAQKPPLDVVELVVRELENIEHFNAGIGSV 75 (195)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSSSSTTCC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCCcCCcC
Confidence 5678899999999999999998855543333345666654
No 11
>4gdv_A L-asparaginase; NTN enzyme, homodimer, hydrolase, L-asparagine; 1.75A {Homo sapiens} PDB: 4gdu_A 4gdt_A 4gdw_A
Probab=86.45 E-value=0.74 Score=44.97 Aligned_cols=41 Identities=29% Similarity=0.385 Sum_probs=30.5
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCC
Q 015611 80 GHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGG 120 (403)
Q Consensus 80 ~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGg 120 (403)
..|.++|.++|++||+|.||.+++.-++=--.-+.+|.|+-
T Consensus 30 ~~a~~~g~~~L~~ggsalDAV~~av~~lEd~p~fNaG~Gs~ 70 (310)
T 4gdv_A 30 VRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSV 70 (310)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHSTTSSSSTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCCCCccCcC
Confidence 45788999999999999999987765554333345677654
No 12
>1p4k_A N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; alpha beta, beta alpha, sandwich, hydrolase; 1.90A {Elizabethkingia meningoseptica} SCOP: d.153.1.5 PDB: 1p4v_A 9gaa_A 9gaf_A 9gac_A 3ljq_A 2gl9_A* 1ayy_A 2gaw_A 2gac_A* 2gaw_B 1ayy_B 2gl9_B* 2gac_B*
Probab=86.27 E-value=1.1 Score=43.51 Aligned_cols=46 Identities=28% Similarity=0.402 Sum_probs=34.2
Q ss_pred EEEc-CCh-hHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCC--CCCCCCCC
Q 015611 74 VVAA-DDG-HCSEIGASTLRLGGHAVDAAVATALCLGVVNP--MASGIGGG 120 (403)
Q Consensus 74 aVas-~~~-~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P--~~sGiGGg 120 (403)
+|+| +.. .|.+.|.++|++||+|.||.+++.-.+= -.| +.+|.|+-
T Consensus 7 vi~tw~~~~~a~~~~~~~L~~ggsaldAV~~av~~lE-d~p~~fnaG~Gs~ 56 (295)
T 1p4k_A 7 VLSTWNFGLHANVEAWKVLSKGGKALDAVEKGVRLVE-DDPTERSVGYGGR 56 (295)
T ss_dssp EEEESTTHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-HCTTCTTSSTTCC
T ss_pred EEEccccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh-hCCCccCcccCCC
Confidence 3445 455 7899999999999999999998844432 445 66777765
No 13
>3c17_A L-asparaginase precursor; isoaspartyl peptidase, NTN-hydrolase, autoprot precursor, hydrolase; 1.95A {Escherichia coli} PDB: 2zak_A
Probab=77.66 E-value=2.6 Score=41.27 Aligned_cols=41 Identities=24% Similarity=0.296 Sum_probs=30.6
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCC
Q 015611 80 GHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGG 120 (403)
Q Consensus 80 ~~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~~sGiGGg 120 (403)
..|.+.|.++|++||+|.||.+++.-++=--.-+.+|.|+-
T Consensus 32 ~~a~~~~~~~L~~ggsalDAV~~av~~lEd~p~fNaG~Gs~ 72 (320)
T 3c17_A 32 SAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGAV 72 (320)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHSTTSSSSTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhhhhhcCCCCCCccCCC
Confidence 46788999999999999999998855443333356676654
No 14
>2a8j_A Taspase 1, threonine aspartase 1; MLL, glycosylspraginase, asparaginase, hydrolase; 1.90A {Homo sapiens} PDB: 2a8i_A 2a8m_A 2a8l_A
Probab=73.85 E-value=3.6 Score=41.75 Aligned_cols=39 Identities=26% Similarity=0.413 Sum_probs=28.6
Q ss_pred hHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCC-CCCCCCC
Q 015611 81 HCSEIGASTLRLGGHAVDAAVATALCLGVVNPM-ASGIGGG 120 (403)
Q Consensus 81 ~as~~G~~vL~~GGNAvDAAVA~al~l~Vv~P~-~sGiGGg 120 (403)
.|.+.|.++|++||+|.||.+++.-.+= -.|. .+|.|+-
T Consensus 67 ~A~~~a~~~L~~GgsAlDAV~~av~~lE-d~p~fNaG~Gs~ 106 (420)
T 2a8j_A 67 RACQKAIEKLQAGALATDAVTAALVELE-DSPFTNAGMGSN 106 (420)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHH-HSTTSSSSTTCC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHh-cCCCCCccCCcC
Confidence 3567899999999999999998744333 3554 5777664
No 15
>1u5t_A Appears to BE functionally related to SNF7; SNF8P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_A
Probab=56.89 E-value=7.7 Score=36.27 Aligned_cols=31 Identities=23% Similarity=0.529 Sum_probs=24.9
Q ss_pred CCccCchHHHHHHHHHHh----cCCccCHhhhccCC
Q 015611 259 EALYNGTVGEKLVKDVRE----AGGILTIEDLRSYK 290 (403)
Q Consensus 259 ~~FY~G~ia~~lv~~~~~----~GG~lt~~DL~~Y~ 290 (403)
..||. ++|.+|++-+.+ +||+|+++|+...-
T Consensus 89 gdfy~-eLavqIvEvC~~tr~~nGGli~l~el~~~~ 123 (233)
T 1u5t_A 89 NDFYY-EVCLKVIEICRQTKDMNGGVISFQELEKVH 123 (233)
T ss_dssp HHHHH-HHHHHHHHHHHHHTTTSSSCEEHHHHHHTT
T ss_pred chHHH-HHHHHHHHHHHHHHHhcCCeeEHHHHHHHH
Confidence 46777 789999888764 79999999987754
No 16
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=54.57 E-value=4.3 Score=38.01 Aligned_cols=69 Identities=23% Similarity=0.430 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhcCccchhcccc----CC-cccCCCCeecCHH-HHHHHHHHHHhCCCCccCchHHHHHHHHHH----hc
Q 015611 208 GQHIANKAEVILNDRGLRQVFAP----NG-KLLKSGDKCYNVE-LAQSLEALAEQGPEALYNGTVGEKLVKDVR----EA 277 (403)
Q Consensus 208 a~~l~~~~~~i~~~~~~~~~f~~----~G-~~~~~Gd~l~~p~-LA~TL~~ia~~G~~~FY~G~ia~~lv~~~~----~~ 277 (403)
.....++...|.++|.+|.-|.. =| .|+--+ .. -+++| |...||. ++|.+|++-+. .+
T Consensus 24 ~~FA~kH~~eI~~dp~fR~~F~~mc~siGVDPlas~-----kg~ws~~l------G~gdfy~-eLavqIvEvC~~tr~~n 91 (234)
T 3cuq_A 24 EEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASG-----KGFWSEML------GVGDFYY-ELGVQIIEVCLALKHRN 91 (234)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHTCCTTSCT-----TSHHHHHH------CHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcccccccCHHHHHHHHHHHHHcCCCcccCC-----cchhhhhc------CcchHHH-HHHHHHHHHHHHHHHhc
Confidence 34445566778888888777731 13 233322 11 11122 3446887 78888888764 57
Q ss_pred CCccCHhhhcc
Q 015611 278 GGILTIEDLRS 288 (403)
Q Consensus 278 GG~lt~~DL~~ 288 (403)
||+|+++|+..
T Consensus 92 GGli~L~el~~ 102 (234)
T 3cuq_A 92 GGLITLEELHQ 102 (234)
T ss_dssp SSEEEHHHHHH
T ss_pred CCeeEHHHHHH
Confidence 99999998866
No 17
>1u5t_B Defective in vacuolar protein sorting; VPS36P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=36.43 E-value=11 Score=33.34 Aligned_cols=25 Identities=16% Similarity=0.303 Sum_probs=16.0
Q ss_pred ccCchHHHHHHHHHH---h-----cCC-ccCHhhh
Q 015611 261 LYNGTVGEKLVKDVR---E-----AGG-ILTIEDL 286 (403)
Q Consensus 261 FY~G~ia~~lv~~~~---~-----~GG-~lt~~DL 286 (403)
||. ++|++|++.+. + +|| +|++.||
T Consensus 12 f~~-ELa~qi~e~c~~~~~~~~~~~GG~~I~L~dl 45 (169)
T 1u5t_B 12 FLD-EIAREIYEFTLSEFKDLNSDTNYMIITLVDL 45 (169)
T ss_dssp HHH-HHHHHHHHHHHTTTTTSSSCCCCCCEETTHH
T ss_pred HHH-HHHHHHHHHHhhcchhhHHhcCceeEEHHHH
Confidence 444 77888877777 4 467 5555554
No 18
>3cuq_B Vacuolar protein-sorting-associated protein 36; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_B
Probab=28.58 E-value=18 Score=33.15 Aligned_cols=29 Identities=17% Similarity=0.378 Sum_probs=21.6
Q ss_pred CCccCchHHHHHHHHHH----hcCCccCHhhhcc
Q 015611 259 EALYNGTVGEKLVKDVR----EAGGILTIEDLRS 288 (403)
Q Consensus 259 ~~FY~G~ia~~lv~~~~----~~GG~lt~~DL~~ 288 (403)
..||. ++|.+|++.+. ++||+|++.||-.
T Consensus 71 ~~f~~-ELa~qi~e~c~~~~~~~GG~I~L~dl~~ 103 (218)
T 3cuq_B 71 TQYHM-QLAKQLAGILQVPLEERGGIMSLTEVYC 103 (218)
T ss_dssp CHHHH-HHHHHHHHHHHHHHHHTTSEEEHHHHHH
T ss_pred cHHHH-HHHHHHHHHHHHHHHhCCCeEEHHHHHH
Confidence 34666 88888888765 5799888888754
No 19
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=27.54 E-value=23 Score=26.07 Aligned_cols=25 Identities=32% Similarity=0.636 Sum_probs=21.6
Q ss_pred HHHHHHHHhcCCccCHhhhcc-CCce
Q 015611 268 EKLVKDVREAGGILTIEDLRS-YKVD 292 (403)
Q Consensus 268 ~~lv~~~~~~GG~lt~~DL~~-Y~~~ 292 (403)
++|.+++++.||+|..+++++ |.|.
T Consensus 13 ~~lL~yIr~sGGildI~~~a~kygV~ 38 (59)
T 2xvc_A 13 RELLDYIVNNGGFLDIEHFSKVYGVE 38 (59)
T ss_dssp HHHHHHHHHTTSEEEHHHHHHHHCCC
T ss_pred HHHHHHHHHcCCEEeHHHHHHHhCCC
Confidence 578999999999999999987 5554
No 20
>2euc_A Hypothetical protein YFMB; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus subtilis} SCOP: a.249.1.1
Probab=26.57 E-value=47 Score=27.49 Aligned_cols=38 Identities=24% Similarity=0.472 Sum_probs=27.1
Q ss_pred HHHHHHhHhhCCCCCCCCCchhHhhhCCHHHHHHHHhhCC
Q 015611 348 LKHMFAVRMTLGDPKFVNNTNTLSEMLSPSYAEQIQLKIF 387 (403)
Q Consensus 348 ~k~a~a~R~~lGDp~f~~v~~~~~~lls~~~a~~~r~~I~ 387 (403)
+.+.|+.=+++||++|. ++..++++|| .|+..++.-|.
T Consensus 48 IDfvFSIImNIGDiE~~-~~~e~e~~Ls-sYL~~LlpfvT 85 (130)
T 2euc_A 48 IDFVFSIIMNIGDIEFA-LTDEIEKKLS-GYLSTLLPYVT 85 (130)
T ss_dssp HHHHHHHHHCCSCCSSC-SSSHHHHHHH-HHHHHHGGGCC
T ss_pred eeeeeeeeeeccChhhh-cchhHHHHHH-HHHHHHHHHHH
Confidence 45677777899999986 5555778877 66666655443
No 21
>3gxq_A Putative regulator of transfer genes ARTA; ribbon-helix-helix, plasmid, DNA binding protein/DNA complex; HET: DNA; 2.35A {Staphylococcus aureus subsp}
Probab=20.18 E-value=34 Score=23.74 Aligned_cols=16 Identities=31% Similarity=0.447 Sum_probs=12.7
Q ss_pred CChhHHHHHHHHHhcC
Q 015611 78 DDGHCSEIGASTLRLG 93 (403)
Q Consensus 78 ~~~~as~~G~~vL~~G 93 (403)
|-.-.|++|++||++|
T Consensus 34 dfdnvsqagreilkkg 49 (54)
T 3gxq_A 34 DFDNVSQAGREILKKG 49 (54)
T ss_dssp STTCHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHH
Confidence 3345789999999987
No 22
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=20.04 E-value=73 Score=23.59 Aligned_cols=24 Identities=17% Similarity=0.331 Sum_probs=20.4
Q ss_pred cccHHHHHHHHHHhcCCCCHHHhHH
Q 015611 167 VPGEIAGLHEAWLKHGRLAWRALFQ 191 (403)
Q Consensus 167 VPG~l~Gl~~a~~~~G~L~w~~ll~ 191 (403)
.+=|..-|.+..++||. .|++++.
T Consensus 12 T~EE~~~L~~gV~k~G~-~W~~I~~ 35 (62)
T 1x58_A 12 TKEEVNYLFHGVKTMGN-HWNSILW 35 (62)
T ss_dssp CHHHHHHHHHHHHHHCS-CHHHHHH
T ss_pred CHHHHHHHHHHHHHHhH-hHHHHHH
Confidence 35578889999999999 9999974
Done!