BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015612
(403 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LDQ4|TAP46_ARATH PP2A regulatory subunit TAP46 OS=Arabidopsis thaliana GN=TAP46 PE=1
SV=2
Length = 405
Score = 577 bits (1487), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/405 (69%), Positives = 340/405 (83%), Gaps = 2/405 (0%)
Query: 1 MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
MG ++ EE+PL LFE+ RKIH A+ESG D D V+KGCE+ +KCEDM+GKL LFSSNET
Sbjct: 1 MGGLAMEEMPLSVLFEQARKIHLAASESGVDQDVVKKGCEMFQKCEDMIGKLALFSSNET 60
Query: 61 KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLK-FISFCEIMELVPEEELE 119
K+DIST NLKY+LVPY+L EL EKI Q+DR+QI+KAS AKLK F SFCE MELVP+EELE
Sbjct: 61 KEDISTNNLKYLLVPYYLAELTEKIIQEDRIQIVKASYAKLKEFFSFCEAMELVPDEELE 120
Query: 120 AVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEED 179
A ++ A D+RA KIARFKRQ+AAE+KL EIKERKERRGRST+A+A S PVE+GE+D
Sbjct: 121 ASSRGGSGAPADRRALKIARFKRQKAAEAKLLEIKERKERRGRSTKASALSTPVESGEDD 180
Query: 180 VLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDE 239
+ DDD EEEREAWL++I+LA+CKA+DLLEMLK+EE+MLSA+KERQLK GE FS LD+
Sbjct: 181 IPDDDSEEEREAWLSSINLAICKAIDLLEMLKREEEMLSAIKERQLKDGEGGFSRDALDD 240
Query: 240 RSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLV 299
R+KKAE+WHRDAA R QY+KPAQPITCATFAQDVLEGRA VSQ HEHK+QP+IFGPAS+V
Sbjct: 241 RTKKAETWHRDAAARIQYSKPAQPITCATFAQDVLEGRASVSQGHEHKNQPLIFGPASIV 300
Query: 300 GGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDN 359
GG L++ERERM AQVFQP HR+PTM IE+AGL EM +MN WQE K +EEA ++WY D
Sbjct: 301 GGPLSTERERMIAQVFQPSHRMPTMCIEDAGLTEMNIMNDWQEQTKKAIEEATTSWYNDK 360
Query: 360 -RKLGTSENDNEDDDDDAVQKARAFDDWKDDNPRGAGNKKLTPCG 403
+ + +++D+D++AV KARAFDDWKDDNPRGAGNKKLTPCG
Sbjct: 361 PLRRKEEDEEDDDEDEEAVMKARAFDDWKDDNPRGAGNKKLTPCG 405
>sp|Q9Y7T1|YCJ5_SCHPO Uncharacterized protein C63.05 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPCC63.05 PE=3 SV=1
Length = 323
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 168/394 (42%), Gaps = 91/394 (23%)
Query: 13 SLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYI 72
SL E + ++ S D + E EKC +V +L +FSSNE D+I T+ L+Y+
Sbjct: 5 SLRELWEETEKLKDSSSTDEKTRSEIVEGYEKCLKLVLQLRIFSSNEEVDEIKTSELRYL 64
Query: 73 LVPYFLGELIEKIAQDDRLQILKASQAKLK-FISFCEIMELVPEEELEAVAQAKPTAFTD 131
++ Y L + +E+ + DRL+ ++ ++ + F+S C+ L P + KP D
Sbjct: 65 MIDYELAKCVEQWTKGDRLKAVQYAKTHYETFLSICDDYGLKP------MQDEKPKTEAD 118
Query: 132 QRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREA 191
R KIAR++ ++ E +L+ A S E EE +ER+
Sbjct: 119 TRTLKIARYRMRQNLEKELK----------------ALSKDSETNEE--------QERKF 154
Query: 192 WLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGE--EEFSEVVLDERSKKAE--SW 247
WLT + +AV LD L ++ E D+L + +K + E+ E + E K+ E SW
Sbjct: 155 WLTKLQIAVEDTLDSLPHIEMEIDLLKRAQAELMKSEDSPEKDEETLRREERKQKEGSSW 214
Query: 248 HRDAAIRAQY----TKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGL 303
D R + +P QP T +
Sbjct: 215 RLDLNTRDKILDKNNRPLQPFT-------------------------------------I 237
Query: 304 TSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDNRKLG 363
S+R VF + LPTM+++E +EM+ N KDN
Sbjct: 238 VSDRNETRKNVFGFGYNLPTMTVDEYLDEEMK--------------RGNIISQKDNPPKS 283
Query: 364 TSENDNEDDDDDA-VQKARAFDDWKDDNPRGAGN 396
S+++++ + DA K R +D++K+ NPRG+GN
Sbjct: 284 DSDDEDDYEKLDAKTMKDRYWDEFKEANPRGSGN 317
>sp|P78318|IGBP1_HUMAN Immunoglobulin-binding protein 1 OS=Homo sapiens GN=IGBP1 PE=1 SV=1
Length = 339
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 45/233 (19%)
Query: 8 ELP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
+LP LP LFE GR++ ++ATE S + V KG ++LEK +M+ +L LFS NE
Sbjct: 8 QLPRLPELFETGRQLLDEVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLDLFSRNED 67
Query: 61 KDDISTANLKYILVPYFLGEL-IEKIAQDDRLQIL-KASQAKLKFISFCEIMELVPEEEL 118
++I++ +LKY+LVP F G L ++++ RL L +A + + +++ C V E EL
Sbjct: 68 LEEIASTDLKYLLVPAFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYH-VAEFEL 126
Query: 119 --------------EAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRST 164
++A A QR KI R+K+++ E +L +K
Sbjct: 127 PKTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMK---------- 176
Query: 165 RAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDML 217
+ VE+G+ D E RE +L + + +L+ +E + +E +L
Sbjct: 177 ------SAVESGQA-----DDERVREYYLLHLQRWIDISLEEIESIDQEIKIL 218
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 376 AVQKARAFDDWKDDNPRGAGNKK 398
+ +AR +DDWKD +PRG GN++
Sbjct: 314 TLHRAREWDDWKDTHPRGYGNRQ 336
>sp|Q61249|IGBP1_MOUSE Immunoglobulin-binding protein 1 OS=Mus musculus GN=Igbp1 PE=1 SV=1
Length = 340
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 42/224 (18%)
Query: 15 FERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTAN 68
FE +K+ + +ATE S D V KG E+LEK M+ +L LFS NE ++I++ +
Sbjct: 17 FETSKKLLEDVEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASTD 76
Query: 69 LKYILVPYFLGEL-IEKIAQDDRLQIL-KASQAKLKFISFCEIMELV-----------PE 115
LKY++VP G L ++++ RL L +A + + F++ C + E
Sbjct: 77 LKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFVHFLTQCHCYHVAEFQLPQTKTNSAE 136
Query: 116 EELEAVAQAKP--TAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPV 173
+ + A P A QR KI R+K+++ E +L +K + V
Sbjct: 137 NNTASSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALK----------------SAV 180
Query: 174 EAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDML 217
E+G+ D E RE L + + +L+ LE + +E +L
Sbjct: 181 ESGQA-----DDERVREYHLLHLRRWIAVSLEELESIDQEIKIL 219
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 373 DDDAVQKARAFDDWKDDNPRGAGNKK 398
++ A+ + R +DDWKD +PRG GN++
Sbjct: 312 EEKALHRMREWDDWKDTHPRGYGNRQ 337
>sp|O08836|IGBP1_RAT Immunoglobulin-binding protein 1 OS=Rattus norvegicus GN=Igbp1 PE=2
SV=2
Length = 340
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 42/224 (18%)
Query: 15 FERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTAN 68
FE +K+ + +ATE S D V KG E+LEK M+ +L LFS NE ++I++ +
Sbjct: 17 FETSKKLLEELEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASID 76
Query: 69 LKYILVPYFLGEL-IEKIAQDDRLQIL-KASQAKLKFISFCEIMEL----VPEEE----- 117
LKY++VP G L ++++ RL L +A + + F++ C + +P+ +
Sbjct: 77 LKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFIHFLTQCHCYHVAEFQLPQTKNNSAE 136
Query: 118 ----LEAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPV 173
++A A QR KI R+K+++ E +L +K + V
Sbjct: 137 NNTARSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALK----------------SAV 180
Query: 174 EAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDML 217
E+G+ D E RE +L + + +L+ +E + +E +L
Sbjct: 181 ESGQA-----DDERVREYYLLHLRRWIGISLEEIESIDQEIKIL 219
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 21/27 (77%)
Query: 372 DDDDAVQKARAFDDWKDDNPRGAGNKK 398
+++ A+ + R +DDWKD +PRG GN++
Sbjct: 311 NEEKALHRMREWDDWKDTHPRGYGNRQ 337
>sp|Q9QZ29|IGB1B_MOUSE Immunoglobulin-binding protein 1b OS=Mus musculus GN=Igbp1b PE=2
SV=1
Length = 343
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 25/189 (13%)
Query: 28 SGCDP--DAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEK- 84
+G P + VR+ ++LEK DM+ +L LFS NE ++I++A+LKY+++P G L K
Sbjct: 34 TGSKPIQEKVREALKLLEKASDMLSQLDLFSRNEDWEEIASADLKYLMLPALKGALTLKL 93
Query: 85 IAQDDRLQILKASQAKLKFISFC------EIMELVPEEELEAVAQAKPTAFTDQRARKIA 138
+ RL +L+ A+ F++F + + + + P A +D + + +
Sbjct: 94 VGSSKRLGLLQ--DAREHFMNFLTQTHSYHVADFQLPWAQSSSMEGNPAATSDAQEQNLV 151
Query: 139 RFKRQRAAESKLQEIKERK--ERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTI 196
QR ++K+Q K++K E+R S ++A VE+G+ D E RE +L +
Sbjct: 152 AMASQR--QTKIQRYKQKKAVEQRLSSLKSA-----VESGQA-----DDERVREYYLLQL 199
Query: 197 SLAVCKALD 205
+ +LD
Sbjct: 200 RRWISISLD 208
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 24/29 (82%)
Query: 370 EDDDDDAVQKARAFDDWKDDNPRGAGNKK 398
ED+D++A+ + + +DDWKD +PRG GN++
Sbjct: 312 EDEDENALHRMQEWDDWKDTHPRGYGNRQ 340
>sp|Q04372|TAP42_YEAST Type 2A phosphatase-associated protein 42 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAP42 PE=1
SV=1
Length = 366
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Query: 48 MVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEK-------IAQDDRLQILKASQAK 100
+ +L LFS+NET DD+STA++K++ V Y+LG LI + +AQ ++++ ++
Sbjct: 49 IFDRLALFSTNETIDDVSTASIKFLAVDYYLGLLISRRQSNDSDVAQRQSMKLIYLKKSV 108
Query: 101 LKFISFCEIME 111
FI+F +++
Sbjct: 109 ESFINFLTLLQ 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,670,485
Number of Sequences: 539616
Number of extensions: 6262480
Number of successful extensions: 26604
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 26015
Number of HSP's gapped (non-prelim): 698
length of query: 403
length of database: 191,569,459
effective HSP length: 120
effective length of query: 283
effective length of database: 126,815,539
effective search space: 35888797537
effective search space used: 35888797537
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)